Synthesis of polypyrrole nanowires with positive effect on MC3T3-E1 cell functions through electrical stimulation

Energy Technology Data Exchange (ETDEWEB)

He, Yuan; Wang, Shihui [Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005 (China); Mu, Jing, E-mail: mujing@picb.ac.cn [Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005 (China); Chinese Academy of Sciences-Max Planck Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Science, Shanghai 200031 (China); Dai, Lingfeng [Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005 (China); Zhang, Zhong [Department of Stomatology, The Affiliated Zhongshan Hospital of Xiamen University, Xiamen 361005 (China); Sun, Yanan; Shi, Wei [Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005 (China); Ge, Dongtao, E-mail: gedt@xmu.edu.cn [Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005 (China)

2017-02-01

Conducting polymer polypyrrole (PPy) possesses good biocompatibility and conductivity and has been used as functional coatings in bone tissue regeneration. In this study, a cholic acid doped PPy nanowires (PPy NWs) coating was electrochemically polymerized on the surface of titanium (Ti). The porous intertwined PPy NWs coating exhibited excellent electrical conductivity and electrochemical activity, better hydrophilicity and higher surface energy. In vitro cell experiments demonstrated that the PPy NWs coating together with a 10 μA substrate-mediate electrical stimulation (ES) was capable to positive regulate the functions of MC3T3-E1 such as cell adhesion, proliferation and differentiation. Further long-term functions of cell tests including alkaline phosphatase (ALP) activity, bone-carboxyglutamic acid-containing protein (BGP) and calcium deposition were all thoroughly increased. These confirmed that the combination of PPy NWs and ES could accelerate MC3T3-E1 cells mature and osteogenesis. Hence, the PPy NWs coating was an electro bioactive coating and may have potential applications in the treatment of bone damage repairing and regeneration with ES. - Highlights: • The porous PPy nanowire coating was electrochemically polymerized on Ti. • PPy NWs had good electrical conductivity, electrochemical stability and hydrophilicity. • Pure PPy NWs with ES could obviously promote the growth and cell functions of MC3T3-E1.

Synthesis of polypyrrole nanowires with positive effect on MC3T3-E1 cell functions through electrical stimulation

International Nuclear Information System (INIS)

He, Yuan; Wang, Shihui; Mu, Jing; Dai, Lingfeng; Zhang, Zhong; Sun, Yanan; Shi, Wei; Ge, Dongtao

2017-01-01

Conducting polymer polypyrrole (PPy) possesses good biocompatibility and conductivity and has been used as functional coatings in bone tissue regeneration. In this study, a cholic acid doped PPy nanowires (PPy NWs) coating was electrochemically polymerized on the surface of titanium (Ti). The porous intertwined PPy NWs coating exhibited excellent electrical conductivity and electrochemical activity, better hydrophilicity and higher surface energy. In vitro cell experiments demonstrated that the PPy NWs coating together with a 10 μA substrate-mediate electrical stimulation (ES) was capable to positive regulate the functions of MC3T3-E1 such as cell adhesion, proliferation and differentiation. Further long-term functions of cell tests including alkaline phosphatase (ALP) activity, bone-carboxyglutamic acid-containing protein (BGP) and calcium deposition were all thoroughly increased. These confirmed that the combination of PPy NWs and ES could accelerate MC3T3-E1 cells mature and osteogenesis. Hence, the PPy NWs coating was an electro bioactive coating and may have potential applications in the treatment of bone damage repairing and regeneration with ES. - Highlights: • The porous PPy nanowire coating was electrochemically polymerized on Ti. • PPy NWs had good electrical conductivity, electrochemical stability and hydrophilicity. • Pure PPy NWs with ES could obviously promote the growth and cell functions of MC3T3-E1.

[Effects of sintered bone modified with surface mineralization/P24 peptide composite biomaterial on the adhesion, proliferation and osteodifferentiation of MC3T3-E1 cells].

Science.gov (United States)

Li, Jingfeng; Zheng, Qixin; Guo, Xiaodong; Chen, Liaobin

2014-10-01

In the present research, the effects of sintered bone modified with surface mineralization/P24 peptide composite biomaterials on the adhesion, proliferation and osteodifferentiation of MC3T3-E1 cells were investigated. The experiments were divided into three groups due to biomaterials used: Group A (composite materials of sintered bone modified with surface mineralization and P24, a peptide of bone morphogenetic protein-2); Group B (sintered bone modified with surface mineralization) and Group C (sintered bone only). The three groups were observed by scanning electron microscopy (SEM) before the experiments, respectively. Then MC3T3-E1 cells were cultured on the surfaces of the three kinds of material, respectively. The cell adhesion rate was assessed by precipitation method. The proliferative ability of MC3T3-E1 cells were measured with MTT assay. And the ALP staining and measurement of alkaline phosphatase (ALP) activity were performed to assess the differentiation of cells into osteoblasts. The SEM results showed that the materials in the three groups retained the natural pore structure and the pore sizes were in the range between 200-850 μm. The adhesive ratio measurements and MTT assay suggested that adhesion and proliferation of MC3T3-E1 cells in Group A were much higher than those in Group B and Group C (P bone modified with surface mineralization/P24 composite material was confirmed to improve the adhesion rate and proliferation and osteodifferentiation of MC3T3-E1 cells, and maintained their morphology.

Collagen-derived dipeptide prolyl-hydroxyproline promotes differentiation of MC3T3-E1 osteoblastic cells

International Nuclear Information System (INIS)

Kimira, Yoshifumi; Ogura, Kana; Taniuchi, Yuri; Kataoka, Aya; Inoue, Naoki; Sugihara, Fumihito; Nakatani, Sachie; Shimizu, Jun; Wada, Masahiro; Mano, Hiroshi

2014-01-01

Highlights: • Pro-Hyp did not affect MC3T3-E1 cell proliferation and matrix mineralization. • Pro-Hyp significantly increased alkaline phosphatase activity. • Pro-Hyp significantly upregulated gene expression of Runx2, Osterix, and Col1α1. - Abstract: Prolyl-hydroxyproline (Pro-Hyp) is one of the major constituents of collagen-derived dipeptides. The objective of this study was to investigate the effects of Pro-Hyp on the proliferation and differentiation of MC3T3-E1 osteoblastic cells. Addition of Pro-Hyp did not affect MC3T3-E1 cell proliferation and matrix mineralization but alkaline phosphatase activity was significantly increased. Furthermore, cells treated with Pro-Hyp significantly upregulated gene expression of Runx2, Osterix, and Col1α1. These results indicate that Pro-Hyp promotes osteoblast differentiation. This study demonstrates for the first time that Pro-Hyp has a positive effect on osteoblast differentiation with upregulation of Runx2, Osterix, and Collα1 gene expression

Ghrelin inhibits the apoptosis of MC3T3-E1 cells through ERK and AKT signaling pathway

Energy Technology Data Exchange (ETDEWEB)

Liang, Qiu-Hua; Liu, Yuan; Wu, Shan-Shan; Cui, Rong-Rong; Yuan, Ling-Qing, E-mail: allenylq@hotmail.com; Liao, Er-Yuan, E-mail: eyliao@21cn.com

2013-11-01

Ghrelin is a 28-amino-acid peptide that acts as a natural endogenous ligand of the growth hormone secretagogue receptor (GHSR) and strongly stimulates the release of growth hormone from the hypothalamus–pituitary axis. Previous studies have identified the important physiological effects of ghrelin on bone metabolism, such as regulating proliferation and differentiation of osteoblasts, independent of GH/IGF-1 axis. However, research on effects and mechanisms of ghrelin on osteoblast apoptosis is still rare. In this study, we identified expression of GHSR in MC3T3-E1 cells and determined the effects of ghrelin on the apoptosis of osteoblastic MC3T3-E1 cells and the mechanism involved. Our data demonstrated that ghrelin inhibited the apoptosis of osteoblastic MC3T3-E1 cells induced by serum deprivation, as determined by terminal deoxynucleotidyl transferase-mediated deoxyribonucleotide triphosphate nick end-labeling (TUNEL) and ELISA assays. Moreover, ghrelin upregulated Bcl-2 expression and downregulated Bax expression in a dose-dependent manner. Our study also showed decreased activated caspase-3 activity under the treatment of ghrelin. Further study suggested that ghrelin stimulated the phosphorylation of ERK and AKT. Pretreatment of cells with the ERK inhibitor PD98059, PI3K inhibitor LY294002, and GHSR-siRNA blocked the ghrelin-induced activation of ERK and AKT, respectively; however, ghrelin did not stimulate the phosphorylation of p38 or JNK. PD90859, LY294002 and GHSR-siRNA attenuated the anti-apoptosis effect of ghrelin in MC3T3-E1 cells. In conclusion, ghrelin inhibits the apoptosis of osteoblastic MC3T3-E1 cells induced by serum deprivation, which may be mediated by activating the GHSR/ERK and GHSR/PI3K/AKT signaling pathways. - Highlights: • We explored the effects of ghrelin on serum deprivation-induced MC3T3-E1 cells apoptosis. • Both ELISA and TUNEL were used to detect the apoptosis. • The receptor of ghrelin, GHSR, was expressed in MC3T3-E1

Ghrelin inhibits the apoptosis of MC3T3-E1 cells through ERK and AKT signaling pathway

International Nuclear Information System (INIS)

Liang, Qiu-Hua; Liu, Yuan; Wu, Shan-Shan; Cui, Rong-Rong; Yuan, Ling-Qing; Liao, Er-Yuan

2013-01-01

Ghrelin is a 28-amino-acid peptide that acts as a natural endogenous ligand of the growth hormone secretagogue receptor (GHSR) and strongly stimulates the release of growth hormone from the hypothalamus–pituitary axis. Previous studies have identified the important physiological effects of ghrelin on bone metabolism, such as regulating proliferation and differentiation of osteoblasts, independent of GH/IGF-1 axis. However, research on effects and mechanisms of ghrelin on osteoblast apoptosis is still rare. In this study, we identified expression of GHSR in MC3T3-E1 cells and determined the effects of ghrelin on the apoptosis of osteoblastic MC3T3-E1 cells and the mechanism involved. Our data demonstrated that ghrelin inhibited the apoptosis of osteoblastic MC3T3-E1 cells induced by serum deprivation, as determined by terminal deoxynucleotidyl transferase-mediated deoxyribonucleotide triphosphate nick end-labeling (TUNEL) and ELISA assays. Moreover, ghrelin upregulated Bcl-2 expression and downregulated Bax expression in a dose-dependent manner. Our study also showed decreased activated caspase-3 activity under the treatment of ghrelin. Further study suggested that ghrelin stimulated the phosphorylation of ERK and AKT. Pretreatment of cells with the ERK inhibitor PD98059, PI3K inhibitor LY294002, and GHSR-siRNA blocked the ghrelin-induced activation of ERK and AKT, respectively; however, ghrelin did not stimulate the phosphorylation of p38 or JNK. PD90859, LY294002 and GHSR-siRNA attenuated the anti-apoptosis effect of ghrelin in MC3T3-E1 cells. In conclusion, ghrelin inhibits the apoptosis of osteoblastic MC3T3-E1 cells induced by serum deprivation, which may be mediated by activating the GHSR/ERK and GHSR/PI3K/AKT signaling pathways. - Highlights: • We explored the effects of ghrelin on serum deprivation-induced MC3T3-E1 cells apoptosis. • Both ELISA and TUNEL were used to detect the apoptosis. • The receptor of ghrelin, GHSR, was expressed in MC3T3-E1

Lysophosphatidic acid induces chemotaxis in MC3T3-E1 osteoblastic cells

Energy Technology Data Exchange (ETDEWEB)

Masiello, Lisa M.; Fotos, Joseph S.; Galileo, Deni S.; Karin, Norm J.

2006-07-01

Lysophosphatidic acid (LPA) is a bioactive lipid that has pleiotropic effects on a variety of cell types and enhances the migration of endothelial and cancer cells, but it is not known if this lipid can alter osteoblast motility. We performed transwell migration assays using MC3T3-E1 osteoblastic cells and found LPA to be a potent chemotactic agent. Quantitative time-lapse video analysis of osteoblast migration after wounds were introduced into cell monolayers indicated that LPA stimulated both migration velocity and the average migration distance per cell. LPA also elicited substantial changes in cell shape and actin cytoskeletal structure; lipid-treated cells contained fewer stress fibers and displayed long membrane processes that were enriched in F-actin. Quantitative RT-PCR analysis showed that MC3T3-E1 cells express all four known LPA-specific G protein-coupled receptors (LPA1-LPA4) with a relative mRNA abundance of LPA1 > LPA4 > LPA2 >> LPA3. LPA-induced changes in osteoblast motility and morphology were antagonized by both pertussis toxin and Ki16425, a subtype-specific blocker of LPA1 and LPA3 receptor function. Cell migration in many cell types is linked to changes in intracellular Ca2+. Ki16425 also inhibited LPA-induced Ca2+ signaling in a dose-dependent manner, suggesting a link between LPA-induced Ca2+ transients and osteoblast chemotaxis. Our data show that LPA stimulates MC3T3-E1 osteoblast motility via a mechanism that is linked primarily to the G protein-coupled receptor LPA1.

GPM GROUND VALIDATION COMPOSITE SATELLITE OVERPASSES MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The GPM Ground Validation Composite Satellite Overpasses MC3E dataset provides satellite overpasses from the AQUA satellite during the Midlatitude Continental...

A Slightly Longer History of E=mc 2, Or How I Came to Hate 4/3

Energy Technology Data Exchange (ETDEWEB)

Rothman, Tony [Princeton University

2012-05-02

According to popular mythology, the equivalence of mass and energy was suddenly conceived of and proven by Einstein in 1905. In fact, serious attempts to connect mass and energy went back at least to J.J. Thomson in 1881 and over the next two decades became the subject of numerous investigations by Maxwellians such as Heaviside, Abraham and Poincaré. The talk focuses on a 1904 thought experiment of Fritz Hasenöhrl, who first announced that blackbody radiation had an equivalent mass such that E = (3/8)mc2, which he subsequently corrected to E = (3/4)mc2. Why did Hasenöhrl get the wrong answer and Einstein get the right one? What does it mean to prove a law of nature? Stephen Boughn and myself have recently carried out an complete relativistic analysis of Hasenöhrl’s thought experiment and, for the first time in the century since it was proposed, have correctly solved the problem. I will try to keep the mathematics at a reasonable level but it will require familiarity with electrodynamics and special relativity.

GPM GROUND VALIDATION SATELLITE SIMULATED ORBITS MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The GPM Ground Validation Satellite Simulated Orbits MC3E dataset is available in the Orbital database , which takes account for the atmospheric profiles, the...

Protective effect of Edaravone against hypoxia-induced cytotoxicity in osteoblasts MC3T3-E1 cells.

Science.gov (United States)

Cao, Bo; Chai, Chunxiang; Zhao, Sishun

2015-12-01

Edaravone is a newly developed clinical medicine for the treatment of acute cerebral infarction. Reduced blood supply to bones (hypoxia) has been involved in the pathological development of osteoporosis. In this study, we investigated the effect of Edaravone and its latent mechanism on hypoxia-induced cell toxicity in MC3T3-E1 cells. Cell viability was determined by the 3-(4,5-dimethyl-thiazol-2yl)-2,5-diphenyl tetrazolium bromide (MTT) assay. Intracellular reactive oxygen species (ROS) and nitric oxide (NO) were determined by the fluorescence dyes 2',7'-dichlorofluorescein diacetate (DCFH-DA) and 4-amino-5-methylamino-2',7'-difluorofluorescein diacetate (DAF-FM DA), respectively. mRNA and proteins were determined by real-time polymerase chain reaction and Western blot analysis, respectively. Edaravone significantly restored the hypoxia-induced reduction of MC3T3-E1 cell viability and inhibited lactate dehydrogenase release. In addition, we found that Edaravone inhibits the generation of ROS and NO. Hoechst staining results indicated that the nuclear condensation characteristic of apoptosis was increased in MC3T3-E1 cells after hypoxia exposure, which was significantly suppressed by Edaravone treatment. Mechanistically, we found that Edaravone markedly reduced the expression of cleaved caspase-3 and blunted the release of cytochrome c. These findings strongly suggested that Edaravone suppresses hypoxia-induced cytotoxicity in MC3T3-E1 cells. The pleiotropic effects of Edaravone on hypoxia exposure in osteoblasts suggest potential antiosteoporosis mechanisms of Edaravone. © 2015 International Union of Biochemistry and Molecular Biology.

miR-195 inhibited abnormal activation of osteoblast differentiation in MC3T3-E1 cells via targeting RAF-1.

Science.gov (United States)

Chao, Chen; Li, Feng; Tan, Zhiping; Zhang, Weizhi; Yang, Yifeng; Luo, Cheng

2018-01-15

Recent reports have demonstrated that RAF-1 L613V (a mutant of RAF-1) mutant mice show bone deformities similar to Noonan syndrome. It has been suggested that RAF-1 L613V might abnormally activate osteoblast differentiation of MC3T3-E1 cells. To demonstrate that RAF-1 is associated with bone deformity and that RAF-1 L613V dependent bone deformity could be inhibited by microRNA-195 (miR-195), we first investigated the amplifying influence of wild-type RAF-1 (WT) or RAF-1 L613V (L613V) on the viability and differentiation of MC3T3-E1 cells induced by bone morphogenetic protein-2 (BMP-2) via 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay, alkaline phosphatase (ALP) and Alizarin Red S (ARS) staining, quantitative real-time polymerase chain reaction (qRT-PCR) and western blot analysis. Subsequently, we investigated the blocking effect and its mechanism of miR-195 for abnormal activation of osteoblast differentiation of MC3T3-E1 cells via targeting RAF-1. RAF-1, especially RAF-1 L613V , abnormally activates osteoblast differentiation of MC3T3-E1 cells induced by BMP-2. Meanwhile, miR-195 could inhibit the cell viability and differentiation of MC3T3-E1 cells. Transfection of miR-195 largely suppressed the L613V-induced viability and osteoblast differentiation of MC3T3-E1 cells and attenuated the accelerative effect of L613V on runt-related transcription factor-2 (Runx2), Osterix (OSX), alkaline phosphatase (ALP), osteocalcin (OCN), and distal-less homeobox 5 (DLX5) osteogenic gene expressions. In addition, miR-195 decreased the expression of RAF-1 mRNA and protein by directly targeting the 3'-untranslated regions (3'-UTR) of RAF-1 mRNA in MC3T3-E1 cells. Our findings indicated that miR-195 inhibited WT and L613V RAF-1 induced hyperactive osteoblast differentiation in MC3T3-E1 cells by targeting RAF-1. miR-195 might be a novel therapeutic agent for the treatment of L613V-induced bone deformity in Noonan syndrome. Copyright © 2017. Published by

Functional expression of 5-HT{sub 2A} receptor in osteoblastic MC3T3-E1 cells

Energy Technology Data Exchange (ETDEWEB)

Hirai, Takao; Kaneshige, Kota; Kurosaki, Teruko [Department of Molecular Pharmacology, Faculty of Pharmacy and Pharmaceutical Sciences, Fukuyama University, 1 Gakuen-cho, Fukuyama, Hiroshima 729-0292 (Japan); Nishio, Hiroaki, E-mail: nishio@fupharm.fukuyama-u.ac.jp [Department of Molecular Pharmacology, Faculty of Pharmacy and Pharmaceutical Sciences, Fukuyama University, 1 Gakuen-cho, Fukuyama, Hiroshima 729-0292 (Japan)

2010-05-28

In the previous study, we reported the gene expression for proteins related to the function of 5-hydroxytryptamine (5-HT, serotonin) and elucidated the expression patterns of 5-HT{sub 2} receptor subtypes in mouse osteoblasts. In the present study, we evaluated the possible involvement of 5-HT receptor subtypes and its inactivation system in MC3T3-E1 cells, an osteoblast cell line. DOI, a 5-HT{sub 2A} and 5-HT{sub 2C} receptor selective agonist, as well as 5-HT concentration-dependently increased proliferative activities of MC3T3-E1 cells in their premature period. This effect of 5-HT on cell proliferation were inhibited by ketanserin, a 5-HT{sub 2A} receptor specific antagonist. Moreover, both DOI-induced cell proliferation and phosphorylation of ERK1 and 2 proteins were inhibited by PD98059 and U0126, selective inhibitors of MEK in a concentration-dependent manner. Furthermore, treatment with fluoxetine, a 5-HT specific re-uptake inhibitor which inactivate the function of extracellular 5-HT, significantly increased the proliferative activities of MC3T3-E1 cells in a concentration-dependent manner. Our data indicate that 5-HT fill the role for proliferation of osteoblast cells in their premature period. Notably, 5-HT{sub 2A} receptor may be functionally expressed to regulate mechanisms underlying osteoblast cell proliferation, at least in part, through activation of ERK/MAPK pathways in MC3T3-E1 cells.

Enhancing osteogenic differentiation of MC3T3-E1 cells by immobilizing RGD onto liquid crystal substrate

International Nuclear Information System (INIS)

Wu, Shaopeng; Yang, Xiaohui; Li, Wenqiang; Du, Lin; Zeng, Rong; Tu, Mei

2017-01-01

To understand the effects of GRGDF modification on MC3T3-E1 cell behavior, we cultured these cells onto a biomimetic liquid crystalline matrix modified with GRGDF peptide (OPC-GA-RGD). Successful immobilization of GRGDF on the liquid crystalline surface was verified by fluorescent labeling, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy and X-ray photoelectron spectroscopy (XPS). OPC-GA-RGDs retained its liquid crystalline feature after surface modification. The RGD-immobilized OPC substrate was hardly beneficial to initial cell adhesion but could support long-term cell survival. The enhancement in cell proliferation did not correlate with RGD density. The lower GRGDF density immobilized on the liquid crystalline OPC matrix (OPC-GA-RGD3) promoted cell adhesion, proliferation, ALP expression level and mineralization, suggesting that both the viscoelasticity-based mechanical stimuli and receptor/ligand-based biochemical cue synergistically modulate MC3T3-E1 cell behavior. - Highlight: • A novel type of GRGDF-immobilized liquid crystalline matrices was fabricated and served as a substrate for the in vitro culture of MC3T3-E1 cells. • The lower RGD density might provide a better condition for initial cell adhesion and proliferation, up-regulation of ALP expression levels, and mineralization. • The intrinsic liquid crystalline feature of OPC matrix, instead of RGD efficiency, promoted initial cell adhesion. • Properties of the liquid crystalline OPC matrix together with the stable receptor-ligand binging synergistically modulated MC3T3-E1 cell behavior.

Enhancing osteogenic differentiation of MC3T3-E1 cells by immobilizing RGD onto liquid crystal substrate

Energy Technology Data Exchange (ETDEWEB)

Wu, Shaopeng; Yang, Xiaohui; Li, Wenqiang; Du, Lin; Zeng, Rong; Tu, Mei, E-mail: tumei@jnu.edu.cn

2017-02-01

To understand the effects of GRGDF modification on MC3T3-E1 cell behavior, we cultured these cells onto a biomimetic liquid crystalline matrix modified with GRGDF peptide (OPC-GA-RGD). Successful immobilization of GRGDF on the liquid crystalline surface was verified by fluorescent labeling, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy and X-ray photoelectron spectroscopy (XPS). OPC-GA-RGDs retained its liquid crystalline feature after surface modification. The RGD-immobilized OPC substrate was hardly beneficial to initial cell adhesion but could support long-term cell survival. The enhancement in cell proliferation did not correlate with RGD density. The lower GRGDF density immobilized on the liquid crystalline OPC matrix (OPC-GA-RGD3) promoted cell adhesion, proliferation, ALP expression level and mineralization, suggesting that both the viscoelasticity-based mechanical stimuli and receptor/ligand-based biochemical cue synergistically modulate MC3T3-E1 cell behavior. - Highlight: • A novel type of GRGDF-immobilized liquid crystalline matrices was fabricated and served as a substrate for the in vitro culture of MC3T3-E1 cells. • The lower RGD density might provide a better condition for initial cell adhesion and proliferation, up-regulation of ALP expression levels, and mineralization. • The intrinsic liquid crystalline feature of OPC matrix, instead of RGD efficiency, promoted initial cell adhesion. • Properties of the liquid crystalline OPC matrix together with the stable receptor-ligand binging synergistically modulated MC3T3-E1 cell behavior.

ClC-3 Promotes Osteogenic Differentiation in MC3T3-E1 Cell After Dynamic Compression.

Science.gov (United States)

Wang, Dawei; Wang, Hao; Gao, Feng; Wang, Kun; Dong, Fusheng

2017-06-01

ClC-3 chloride channel has been proved to have a relationship with the expression of osteogenic markers during osteogenesis, persistent static compression can upregulate the expression of ClC-3 and regulate osteodifferentiation in osteoblasts. However, there was no study about the relationship between the expression of ClC-3 and osteodifferentiation after dynamic compression. In this study, we applied dynamic compression on MC3T3-E1 cells to detect the expression of ClC-3, runt-related transcription factor 2 (Runx2), bone morphogenic protein-2 (BMP-2), osteopontin (OPN), nuclear-associated antigen Ki67 (Ki67), and proliferating cell nuclear antigen (PCNA) in biopress system, then we investigated the expression of these genes after dynamic compression with Chlorotoxin (specific ClC-3 chloride channel inhibitor) added. Under transmission electron microscopy, there were more cell surface protrusions, rough surfaced endoplasmic reticulum, mitochondria, Golgi apparatus, abundant glycogen, and lysosomes scattered in the cytoplasm in MC3T3-E1 cells after dynamic compression. The nucleolus was more obvious. We found that ClC-3 was significantly up-regulated after dynamic compression. The compressive force also up-regulated Runx2, BMP-2, and OPN after dynamic compression for 2, 4 and 8 h. The proliferation gene Ki67 and PCNA did not show significantly change after dynamic compression for 8 h. Chlorotoxin did not change the expression of ClC-3 but reduced the expression of Runx2, BMP-2, and OPN after dynamic compression compared with the group without Cltx added. The data from the current study suggested that ClC-3 may promotes osteogenic differentiation in MC3T3-E1 cell after dynamic compression. J. Cell. Biochem. 118: 1606-1613, 2017. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Latent Heating Profiles Derived from ARM Radar Observations in MC3E and GoAmazon Field Campaigns

Science.gov (United States)

Min, Q.; Li, R.; Mu, Z.; Giangrande, S. E.; Wang, Y.

2016-12-01

Atmosphere latent heating (LH) is released through water phase change processes in the atmosphere. There is a physical connection between LH rate and updraft velocity (ω) inside clouds. In this study, we develop a new LH algorithm based on a quantified LH-ω relationship found in cloud resolving model (CRM) simulations. The self-consistency check with CRM simulations shows that the retrievals correctly replicate the main features of LH profiles, including their total and individual components (i.e. condensation-evaporation heating rate, deposition-sublimation heating rate, and freezing-melting heating rate). Further, the algorithm is applied to real cases from the DOE-ARM MC3E and GoAmazon2014/6 Field Campaigns using available UHF (915 and 1290 MHz) zenith radar retrievals of vertical velocity and rain rate as input. The retrieved LH profiles in the deep convective rains show positive heating throughout the column, the LH profiles in the stratiform rains with well-defined bright-band showing clear dipole patterns with positive heating above and negative cooling below the freezing level. The altitudes of maximum heating in the widespread stratiform regimes are clearly higher than those found within deep convective regions. Overall, these Latent heating rate profiles, as an important geophysical quantity of interest, can provide useful climate diagnostic data, and ultimately, constraints for model-based analyses of large-scale heating distributions.

A novel chimeric peptide binds MC3T3‑E1 cells to titanium and enhances their proliferation and differentiation.

Science.gov (United States)

Wang, Dan; Liao, Xiaofu; Qin, Xu; Shi, Wei; Zhou, Bin

2013-05-01

Previous studies have demonstrated that the modification of the titanium (Ti) surface of an implant with RGD (Arg‑Gly‑Asp) promotes the activity of osteoblasts. A novel Ti‑binding peptide, minTBP‑1, and a chimeric peptide, minTBP‑1‑PRGDN, have been synthesized to assist the fixing of RGD to Ti. In our previous study, minTBP‑1‑PRGDN demonstrated favorable affinity for Ti surfaces and facilitated the adhesion of MC3T3‑E1 cells. The aim of the present study was to evaluate the effect of this chimeric peptide on the proliferation and differentiation of MC3T3‑E1 cells. For this purpose, MC3T3‑E1 cells were cultured and differentiation was induced on Ti discs precoated with minTBP‑1‑PRGDN, minTBP‑1 or PRGDN. The MC3T3‑E1 cells on the minTBP‑1‑PRGDN‑precoated Ti disc were observed to exhibit the highest cell number after 24 h and alkaline phosphatase levels in all groups increased in a time‑dependent manner. In addition, marked expression of osteogenic marker genes [osteopontin (OPN) and osteocalcin (OC)] was detected on minTBP‑1‑PRGDN/Ti at day 14. Mineralized deposits on minTBP‑1‑PRGDN/Ti presented the maximal average area and the highest number of deposits was observed on PRGDN/Ti. The present study indicates that minTBP‑1‑PRGDN may enhance and accelerate the activities of MC3T3‑E1 cells on Ti, however, its role in vivo must be determined by further studies.

Cuscuta chinensis seeds water extraction protecting murine osteoblastic MC3T3-E1 cells against tertiary butyl hydroperoxide induced injury.

Science.gov (United States)

Gao, Jian-mei; Li, Ran; Zhang, Lei; Jia, Li-long; Ying, Xi-xiang; Dou, De-qiang; Li, Jian-chun; Li, Hai-bo

2013-07-09

Cuscuta chinensis (C. chinensis) is a well-known traditional Chinese herb that has been used to treat heart disease, diabetes, liver injury, cancer, and aging. Murine osteoblastic MC3T3-E1 cells were treated with various concentrations of C. chinensis water extraction at different time intervals. The antioxidant effect of C. chinensis on MC3T3-E1 cells was evaluated using MTT and TUNEL assays. The effect of C. chinensis on cell cycle was analyzed by flow cytometry with propidium iodide. Lipid peroxidation was measured by the HPLC method. The cellular redox status was determined from the reduced glutathione to oxidized glutathione ratio (GSH/GSSG) and the enzymes involved in glutathione metabolism, including glutathione reductase (GR), Glutathione S-transferase (GST), and Glucose-6-phosphate dehydrogenase (G6PD). The changes in relative mitochondrial transmembrane potential (ΔΨm) in the MC3T3-E1 cells were analyzed with rhodamine 123 staining. Western blot analysis was used to evaluate the levels of cytochrome c (cyto c), Bax, Bcl-2, caspase 3, Sirt3, and IDH2 expressions. The C. chinensis water extraction protects tertiary butyl hydroperoxide (TBHP)-treated MC3T3-E1 cells from death in a dose-dependent manner. C. chinensis treatment significantly inhibited the reactive oxygen species (ROS) generation, malondialdehyde (MDA) production, and increased the activity of superoxide dismutase (SOD), GR, GST, and G6PD. The release of cyto c from mitochondria was reduced by C. chinensis, which increased the expression of antiapoptotic IDH2, Sirt3, and Bcl-2 and decreased the expression of Bax, cyto c, and caspase 3. C. chinensis modulated the oxidative stress-induced apoptosis in MC3T3-E1 cells, probably due to its antioxidant activity and functioning via mitochondria-dependent pathways. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

GPM GROUND VALIDATION NASA ER-2 NAVIGATION DATA MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The GPM Ground Validation NASA ER-2 Navigation Data MC3E dataset contains information recorded by an on board navigation recorder (NavRec). In addition to typical...

GPM GROUND VALIDATION NASA MICRO RAIN RADAR (MRR) MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The GPM Ground Validation NASA Micro Rain Radar (MRR) MC3E dataset was collected by a Micro Rain Radar (MRR), which is a vertically pointing Doppler radar which...

Sou do mundo, sou Minas Gerais: o ser da experiência em "Para Lennon e McCartney"

Directory of Open Access Journals (Sweden)

Rafael Senra Coelho

2018-04-01

Full Text Available RESUMO: A canção “Para Lennon e McCartney” imagina um diálogo entre músicos latino americanos e anglo-saxões. Os dois cantores citados no título tornam-se uma metonímia de toda a indústria musical do eixo Europa/EUA. Nessa composição, a condição simultânea rural e urbana que compõe o espaço da periferia permite que o sujeito da experiência persista na modernidade. A voz do narrador experiente confronta todo o projeto de identidade supostamente coerente da metrópole, baseado no acúmulo de informação. PALAVRAS-CHAVE: Identidade, Globalização, Experiência, Música Popular. ___________________________________   ABSTRACT: The song "Para Lennon e McCartney" imagines a dialogue between Latin American and Anglo-Saxon musicians. The two singers mentioned in the title symbolize the entire music industry from Europe and United States. In this composition, the simultaneous rural and urban condition of poor countries allows the permanence of the experienced person in modernity. The voice of the experienced narrator confronts the coherent identity project from people in North metropolis, based in accumulation of information. KEYWORDS: Identity, Globalization, Experience, Popular Music.

The CLOUD experiment

CERN Multimedia

Maximilien Brice

2006-01-01

The Cosmics Leaving Outdoor Droplets (CLOUD) experiment as shown by Jasper Kirkby (spokesperson). Kirkby shows a sketch to illustrate the possible link between galactic cosmic rays and cloud formations. The CLOUD experiment uses beams from the PS accelerator at CERN to simulate the effect of cosmic rays on cloud formations in the Earth's atmosphere. It is thought that cosmic ray intensity is linked to the amount of low cloud cover due to the formation of aerosols, which induce condensation.

CLOUD-POWERED e-HEALTH

Directory of Open Access Journals (Sweden)

Liviu Cristian STEFAN

2013-09-01

Full Text Available During the last years, the global economic crisis has affected all domains, including the health sector. Many governments have considered that the solution to this problem is to reduce public expenses on healthcare, to decrease the budgets for health services, to rationalize the medical plans for the population, to increase the share of health expenditure paid by patients and to select the products on the pharmaceutical market.In order to improve the medical service whilst maintaining reduced infrastructure costs, the new digital technologies offer the solution of cloud-based services for the e-health systems.In this paper we present the cloud-hosted healthcare applications concept, the advantages of using e-Health on distributed platforms and some considerations about the security levels. Also, we further present an experiment based on the free OpenEMR solution, which has also a cloud version, ZH-Services OpenEMR.

Ginsenoside Re Promotes Osteoblast Differentiation in Mouse Osteoblast Precursor MC3T3-E1 Cells and a Zebrafish Model

Directory of Open Access Journals (Sweden)

Hye-Min Kim

2016-12-01

Full Text Available Bone homeostasis is tightly regulated to balance bone formation and bone resorption. Many anabolic drugs are used as bone-targeted therapeutic agents for the promotion of osteoblast-mediated bone formation or inhibition of osteoclast-mediated bone resorption. Previous studies showed that ginsenoside Re has the effect of the suppression of osteoclast differentiation in mouse bone-marrow derived macrophages and zebrafish. Herein, we investigated whether ginsenoside Re affects osteoblast differentiation and mineralization in in vitro and in vivo models. Mouse osteoblast precursor MC3T3-E1 cells were used to investigate cell viability, alkaline phosphatase (ALP activity, and mineralization. In addition, we examined osteoblastic signaling pathways. Ginsenoside Re affected ALP activity without cytotoxicity, and we also observed the stimulation of osteoblast differentiation through the activation of osteoblast markers including runt-related transcription factor 2, type 1 collagen, ALP, and osteocalcin in MC3T3-E1 cells. Moreover, Alizarin red S staining indicated that ginsenoside Re increased osteoblast mineralization in MC3T3-E1 cells and zebrafish scales compared to controls. These results suggest that ginsenoside Re promotes osteoblast differentiation as well as inhibits osteoclast differentiation, and it could be a potential therapeutic agent for bone diseases.

GPM GROUND VALIDATION CONICAL SCANNING MILLIMETER-WAVE IMAGING RADIOMETER (COSMIR) MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The GPM Ground Validation Conical Scanning Millimeter-wave Imaging Radiometer (COSMIR) MC3E dataset used the Conical Scanning Millimeter-wave Imaging Radiometer...

Determining Best Estimates and Uncertainties in Cloud Microphysical Parameters from ARM Field Data: Implications for Models, Retrieval Schemes and Aerosol-Cloud-Radiation Interactions

Energy Technology Data Exchange (ETDEWEB)

McFarquhar, Greg [Univ. of Illinois, Urbana, IL (United States)

2015-12-28

We proposed to analyze in-situ cloud data collected during ARM/ASR field campaigns to create databases of cloud microphysical properties and their uncertainties as needed for the development of improved cloud parameterizations for models and remote sensing retrievals, and for evaluation of model simulations and retrievals. In particular, we proposed to analyze data collected over the Southern Great Plains (SGP) during the Mid-latitude Continental Convective Clouds Experiment (MC3E), the Storm Peak Laboratory Cloud Property Validation Experiment (STORMVEX), the Small Particles in Cirrus (SPARTICUS) Experiment and the Routine AAF Clouds with Low Optical Water Depths (CLOWD) Optical Radiative Observations (RACORO) field campaign, over the North Slope of Alaska during the Indirect and Semi-Direct Aerosol Campaign (ISDAC) and the Mixed-Phase Arctic Cloud Experiment (M-PACE), and over the Tropical Western Pacific (TWP) during The Tropical Warm Pool International Cloud Experiment (TWP-ICE), to meet the following 3 objectives; derive statistical databases of single ice particle properties (aspect ratio AR, dominant habit, mass, projected area) and distributions of ice crystals (size distributions SDs, mass-dimension m-D, area-dimension A-D relations, mass-weighted fall speeds, single-scattering properties, total concentrations N, ice mass contents IWC), complete with uncertainty estimates; assess processes by which aerosols modulate cloud properties in arctic stratus and mid-latitude cumuli, and quantify aerosol’s influence in context of varying meteorological and surface conditions; and determine how ice cloud microphysical, single-scattering and fall-out properties and contributions of small ice crystals to such properties vary according to location, environment, surface, meteorological and aerosol conditions, and develop parameterizations of such effects.In this report we describe the accomplishments that we made on all 3 research objectives.

Nano-hydroxyapatite particles induce apoptosis on MC3T3-E1 cells and tissue cells in SD rats

Science.gov (United States)

Wang, Liting; Zhou, Gang; Liu, Haifeng; Niu, Xufeng; Han, Jingyun; Zheng, Lisha; Fan, Yubo

2012-04-01

While the advantages of nanomaterials are being increasingly recognized, their potential toxicity is drawing more and more attention and concern. In this study, we explore the toxicity mechanism of 20-30 nm rod-shaped hydroxyapatite (HA) nanoparticles in vitro and in vivo. The nanoparticles were prepared by precipitation and characterized by IR, XRD and TEM. Concentrations of 0 μg mL-1, 10 μg mL-1, 100 μg mL-1, 1 mg mL-1, and 10 mg mL-1 were applied to the MC3T3-E1 cells for viability (MTT-test). Based on the characteristic differences of the two methods of cell death, the morphological features of the MC3T3-E1 cell line co-cultured with nano-hydroxyapatite (n-HA) (10 mg mL-1) for 24 h were also observed by TEM. Furthermore, important serum biochemical markers and histopathological examinations were used to evaluate the potential toxicological effect of n-HA on the major organs of SD rats injected intraperitoneally with n-HA (33.3 mg kg-1 body weight). In the results, we found cell growth inhibition and apoptosis in MC3T3-E1 cells co-cultured with n-HA. Moreover, apoptosis but not necrosis was illustrated in liver and renal tissue by using histopathology slices and serum biochemical markers. It suggests that apoptosis may be the possible mechanism of n-HA toxicity and provides a better understanding of the biocompatibility of nanomaterials applied in human bone repair.

GPM GROUND VALIDATION SATELLITE SIMULATED ORBITS MC3E V1

Data.gov (United States)

National Aeronautics and Space Administration — The Satellite Simulator database is available for several campaigns: Light Precipitation Evaluation Experiment (LPVEX), Midlatitude Continental Convective Clouds...

Quality of Experience Assessment of Video Quality in Social Clouds

Directory of Open Access Journals (Sweden)

Asif Ali Laghari

2017-01-01

Full Text Available Video sharing on social clouds is popular among the users around the world. High-Definition (HD videos have big file size so the storing in cloud storage and streaming of videos with high quality from cloud to the client are a big problem for service providers. Social clouds compress the videos to save storage and stream over slow networks to provide quality of service (QoS. Compression of video decreases the quality compared to original video and parameters are changed during the online play as well as after download. Degradation of video quality due to compression decreases the quality of experience (QoE level of end users. To assess the QoE of video compression, we conducted subjective (QoE experiments by uploading, sharing, and playing videos from social clouds. Three popular social clouds, Facebook, Tumblr, and Twitter, were selected to upload and play videos online for users. The QoE was recorded by using questionnaire given to users to provide their experience about the video quality they perceive. Results show that Facebook and Twitter compressed HD videos more as compared to other clouds. However, Facebook gives a better quality of compressed videos compared to Twitter. Therefore, users assigned low ratings for Twitter for online video quality compared to Tumblr that provided high-quality online play of videos with less compression.

Mechanotransductive Regulation of Gap-Junction Activity Between MLO-Y4 Osteocyte-Like and MC3T3-E1 Osteoblast-Like Cells in Three-Dimensional Co-Culture.

Science.gov (United States)

Juran, C. M.; Blaber, E. A.; Almeida, E. A. C.

2016-01-01

Cell and animal studies conducted onboard the International Space Station and formerly on Shuttle flights have provided groundbreaking data illuminating the deleterious biological response of bone to mechanical unloading. However the intercellular communicative mechanisms associated with the regulation of bone synthesis and bone resorption cells are still largely unknown. Connexin-43 (CX43), a gap junction protein, is hypothesized to play a significant role in osteoblast and osteocyte signaling. The purpose of this investigation was to evaluate within a novel three-dimensional microenvironment how the osteocyte-osteoblast gap-junction expression changes when cultures are exposed to exaggerated mechanical load. MLO-Y4 osteocyte-like cells were cultured on a 3D-Biotek polystyrene insert and placed in direct contact with an MC3T3-E1 pre-osteoblast co-cultured monolayer and exposed to 48 h of mechanical stimulation (pulsatile fluid flow (PFF) or monolayer cyclic stretch (MCS)) then evaluated for viability, proliferation, metabolism, and CX43 expression. Mono-cultured MLO-Y4 and MC3T3-E1 control experiments were conducted under PFF and MCS stimulation to observe how strain application stimuli (PFF cell membrane shear or MCS cell focal adhesion/attachment loading) initiates different signaling pathways or downstream regulatory controls. TotalLive cell count, viability and metabolic reduction (Trypan Blue, LIVEDead and Alamar Blue analysis respectively) indicate that mechanical activation of MC3T3-E1 cells inhibits proliferation while maintaining an average 1.04E4 reductioncell metabolic rate, *p0.05 n4. MLO-Y4s in monolayer culture increase in number when exposed to MCS loading but the percent of live cells within the population is low (46.3 total count, *p0.05 n4), these results may indicate an apoptotic signaling cascade. PFF stimulation of the three-dimensional co-cultures elicits a universal increase in CX43 in MLO-Y4 and MC3T3-E1 cells, illustrated by

Verification of MC{sup 2}-3 Doppler Sample Models in ZPPR-15 D Experiments

Energy Technology Data Exchange (ETDEWEB)

Lee, Min Jae; Hartanto, Donny; Kim, Sang Ji [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

2016-10-15

In this paper, the change of reaction rate and broadened cross section were estimated by as-built MCNP models for metallic uranium sample in ZPPR-15D using ENDF/B-VII.0 library, and the results were compared with deterministic calculations provided in previous work. The Doppler broadening is an instant feedback mechanism that improves safety and stability for both thermal and fast reactors. Therefore, the accuracy of Doppler coefficient becomes an important parameter in reactor design as well as in the safety analysis. The capability of the Doppler worth calculation by a modern computer code suites such as MC2-3 and DIF3DVARIANT, has been validated against the Zero Power Physics Reactor-15 (ZPPR-15) Doppler worth measurement experiments. For the same experiments, our previous work suggested four different MC2-3 Doppler sample models for enhanced accuracy, which are combinations of heterogeneous models and the super cell approach. The MOC and MOC-SPC models showed the smallest error in estimating the U-238 total cross section of Doppler sample N-11, and the Doppler broadening effects are well applied to the cross section compared to other two models, HOM and SPC. The effects of the super cell approach can be hardly seen, since the broadened cross section is almost the same with and without the super cell approach. Comparing the transition of reaction density, MOC and MOC-SPC models also show similar behavior as MCNP's with minor errors. As a conclusion, we could obtain more consistent broadened cross section as well as reaction density transition by providing heterogeneous models from MC2-3's MOC module.

Graphene Oxide Hybridized nHAC/PLGA Scaffolds Facilitate the Proliferation of MC3T3-E1 Cells

Science.gov (United States)

Liang, Chunyong; Luo, Yongchao; Yang, Guodong; Xia, Dan; Liu, Lei; Zhang, Xiaomin; Wang, Hongshui

2018-01-01

Biodegradable porous biomaterial scaffolds play a critical role in bone regeneration. In this study, the porous nano-hydroxyapatite/collagen/poly(lactic-co-glycolic acid)/graphene oxide (nHAC/PLGA/GO) composite scaffolds containing different amount of GO were fabricated by freeze-drying method. The results show that the synthesized scaffolds possess a three-dimensional porous structure. GO slightly improves the hydrophilicity of the scaffolds and reinforces their mechanical strength. Young's modulus of the 1.5 wt% GO incorporated scaffold is greatly increased compared to the control sample. The in vitro experiments show that the nHAC/PLGA/GO (1.5 wt%) scaffolds significantly cell adhesion and proliferation of osteoblast cells (MC3T3-E1). This present study indicates that the nHAC/PLGA/GO scaffolds have excellent cytocompatibility and bone regeneration ability, thus it has high potential to be used as scaffolds in the field of bone tissue engineering.

Linarin isolated from Buddleja officinalis prevents hydrogen peroxide-induced dysfunction in osteoblastic MC3T3-E1 cells.

Science.gov (United States)

Kim, Young Ho; Lee, Young Soon; Choi, Eun Mi

2011-01-01

The flowers and leaves buds of Buddleja officinalis MAXIM (Buddlejaceae) are used to treat eye troubles, hernia, gonorrhea and liver troubles in Asia. To elucidate the protective effects of linarin isolated from B. officinalis on the response of osteoblast to oxidative stress, osteoblastic MC3T3-E1 cells were pre-incubated with linarin for 1h before treatment with 0.3mM H(2)O(2) for 48h, and markers of osteoblast function and oxidative damage were examined. Linarin significantly (P<0.05) increased cell survival, alkaline phosphatase (ALP) activity, collagen content, calcium deposition, and osteocalcin secretion and decreased the production of receptor activator of nuclear factor-kB ligand (RANKL), protein carbonyl (PCO), and malondialdehyde (MDA) of osteoblastic MC3T3-E1 cells in the presence of hydrogen peroxide. These results demonstrate that linarin can protect osteoblasts against hydrogen peroxide-induced osteoblastic dysfunction and may exert anti-resorptive actions, at least in part, via the reduction of RANKL and oxidative damage. 2011 Elsevier Inc. All rights reserved.

Osteoblast-like MC3T3-E1 Cells Prefer Glycolysis for ATP Production but Adipocyte-like 3T3-L1 Cells Prefer Oxidative Phosphorylation.

Science.gov (United States)

Guntur, Anyonya R; Gerencser, Akos A; Le, Phuong T; DeMambro, Victoria E; Bornstein, Sheila A; Mookerjee, Shona A; Maridas, David E; Clemmons, David E; Brand, Martin D; Rosen, Clifford J

2018-06-01

Mesenchymal stromal cells (MSCs) are early progenitors that can differentiate into osteoblasts, chondrocytes, and adipocytes. We hypothesized that osteoblasts and adipocytes utilize distinct bioenergetic pathways during MSC differentiation. To test this hypothesis, we compared the bioenergetic profiles of preosteoblast MC3T3-E1 cells and calvarial osteoblasts with preadipocyte 3T3L1 cells, before and after differentiation. Differentiated MC3T3-E1 osteoblasts met adenosine triphosphate (ATP) demand mainly by glycolysis with minimal reserve glycolytic capacity, whereas nondifferentiated cells generated ATP through oxidative phosphorylation. A marked Crabtree effect (acute suppression of respiration by addition of glucose, observed in both MC3T3-E1 and calvarial osteoblasts) and smaller mitochondrial membrane potential in the differentiated osteoblasts, particularly those incubated at high glucose concentrations, indicated a suppression of oxidative phosphorylation compared with nondifferentiated osteoblasts. In contrast, both nondifferentiated and differentiated 3T3-L1 adipocytes met ATP demand primarily by oxidative phosphorylation despite a large unused reserve glycolytic capacity. In sum, we show that nondifferentiated precursor cells prefer to use oxidative phosphorylation to generate ATP; when they differentiate to osteoblasts, they gain a strong preference for glycolytic ATP generation, but when they differentiate to adipocytes, they retain the strong preference for oxidative phosphorylation. Unique metabolic programming in mesenchymal progenitor cells may influence cell fate and ultimately determine the degree of bone formation and/or the development of marrow adiposity. © 2018 American Society for Bone and Mineral Research. © 2018 American Society for Bone and Mineral Research.

Multifunctional chitosan/polyvinyl pyrrolidone/45S5 Bioglass® scaffolds for MC3T3-E1 cell stimulation and drug release

Energy Technology Data Exchange (ETDEWEB)

Yao, Qingqing [Institute of Advanced Materials for Nano-Bio Applications, School of Ophthalmology & Optometry, Wenzhou Medical University, 270 Xueyuan Xi Road, Wenzhou, Zhejiang 325027 (China); Li, Wei [Institute of Biomaterials, Department of Materials Science and Engineering, University of Erlangen-Nuremberg, Cauerstrasse 6, Erlangen 91058 (Germany); Yu, Shanshan; Ma, Liwei [Institute of Advanced Materials for Nano-Bio Applications, School of Ophthalmology & Optometry, Wenzhou Medical University, 270 Xueyuan Xi Road, Wenzhou, Zhejiang 325027 (China); Jin, Dayong [Institute for Biomedical Materials and Devices, Faculty of Science, University of Technology Sydney, NSW 2007 (Australia); Advanced Cytometry Labs, ARC Center of Excellence for Nanoscale BioPhotonics, Macquarie University, Sydney, NSW 2109 (Australia); Boccaccini, Aldo R., E-mail: Aldo.Boccaccini@ww.uni-erlangen.de [Institute of Biomaterials, Department of Materials Science and Engineering, University of Erlangen-Nuremberg, Cauerstrasse 6, Erlangen 91058 (Germany); Liu, Yong, E-mail: yongliu1980@hotmail.com [Institute of Advanced Materials for Nano-Bio Applications, School of Ophthalmology & Optometry, Wenzhou Medical University, 270 Xueyuan Xi Road, Wenzhou, Zhejiang 325027 (China); Advanced Cytometry Labs, ARC Center of Excellence for Nanoscale BioPhotonics, Macquarie University, Sydney, NSW 2109 (Australia)

2015-11-01

Novel chitosan–polyvinyl pyrrolidone/45S5 Bioglass® (CS-PVP/BG) scaffolds were prepared via foam replication and chemical cross-linking techniques. The pristine BG, CS-PVP coated BG and genipin cross-linked CS-PVP/BG (G-CS-PVP/BG) scaffolds were synthesized and characterized in terms of chemical composition, physical structure and morphology respectively. Resistance to enzymatic degradation of the scaffold is improved significantly with the use of genipin cross-linked CS-PVP. The bio-effects of scaffolds on MC3T3-E1 osteoblast-like cells were evaluated by studying cell viability, adhesion and proliferation. The CCK-8 assay shows that cell viability on the resulting G-CS-PVP/BG scaffold is improved obviously after cross-linking of genipin. Cell skeleton images exhibit that well-stretched F-actin bundles are obtained on the G-CS-PVP/BG scaffold. SEM results present significant improvement on the cell adhesion and proliferation for cells cultured on the G-CS-PVP/BG scaffold. The drug release performance on the as-synthesized scaffold was studied in a phosphate buffered saline (PBS) solution. Vancomycin is found to be released in burst fashion within 24 h from the pristine BG scaffold, however, the release period from the G-CS-PVP/BG scaffold is enhanced to 7 days, indicating improved drug release properties of the G-CS-PVP/BG scaffold. Our results suggest that the G-CS-PVP/BG scaffolds possess promising physicochemical properties, sustained drug release capability and good biocompatibility for MC3T3-E1 cells' proliferation and adhesion, suggesting their potential applications in areas such as MC3T3-E1 cell stimulation and bone tissue engineering. - Highlights: • Novel genipi–chitosan–polyvinyl pyrrolidone/45S5 Bioglass® scaffolds are prepared. • Resistance to enzymatic degradation of the scaffold is improved significantly. • The resulting scaffold shows enhanced MC3T3-E1 cell adhesion and proliferation. • Release of antibiotic vancomycin from the

Multifunctional chitosan/polyvinyl pyrrolidone/45S5 Bioglass® scaffolds for MC3T3-E1 cell stimulation and drug release

International Nuclear Information System (INIS)

Yao, Qingqing; Li, Wei; Yu, Shanshan; Ma, Liwei; Jin, Dayong; Boccaccini, Aldo R.; Liu, Yong

2015-01-01

Novel chitosan–polyvinyl pyrrolidone/45S5 Bioglass® (CS-PVP/BG) scaffolds were prepared via foam replication and chemical cross-linking techniques. The pristine BG, CS-PVP coated BG and genipin cross-linked CS-PVP/BG (G-CS-PVP/BG) scaffolds were synthesized and characterized in terms of chemical composition, physical structure and morphology respectively. Resistance to enzymatic degradation of the scaffold is improved significantly with the use of genipin cross-linked CS-PVP. The bio-effects of scaffolds on MC3T3-E1 osteoblast-like cells were evaluated by studying cell viability, adhesion and proliferation. The CCK-8 assay shows that cell viability on the resulting G-CS-PVP/BG scaffold is improved obviously after cross-linking of genipin. Cell skeleton images exhibit that well-stretched F-actin bundles are obtained on the G-CS-PVP/BG scaffold. SEM results present significant improvement on the cell adhesion and proliferation for cells cultured on the G-CS-PVP/BG scaffold. The drug release performance on the as-synthesized scaffold was studied in a phosphate buffered saline (PBS) solution. Vancomycin is found to be released in burst fashion within 24 h from the pristine BG scaffold, however, the release period from the G-CS-PVP/BG scaffold is enhanced to 7 days, indicating improved drug release properties of the G-CS-PVP/BG scaffold. Our results suggest that the G-CS-PVP/BG scaffolds possess promising physicochemical properties, sustained drug release capability and good biocompatibility for MC3T3-E1 cells' proliferation and adhesion, suggesting their potential applications in areas such as MC3T3-E1 cell stimulation and bone tissue engineering. - Highlights: • Novel genipi–chitosan–polyvinyl pyrrolidone/45S5 Bioglass® scaffolds are prepared. • Resistance to enzymatic degradation of the scaffold is improved significantly. • The resulting scaffold shows enhanced MC3T3-E1 cell adhesion and proliferation. • Release of antibiotic vancomycin from the

Osteogenic differentiation of MC3T3-E1 cells on poly(L-lactide)/Fe{sub 3}O{sub 4} nanofibers with static magnetic field exposure

Energy Technology Data Exchange (ETDEWEB)

Cai, Qing [State Key Laboratory of Organic–inorganic Composites, Beijing University of Chemical Technology, Beijing 100029 (China); Beijing Laboratory of Biomedical Materials, Beijing University of Chemical Technology, Beijing 100029 (China); Shi, Yuzhou; Shan, Dingying; Jia, Wenkai; Duan, Shun [Beijing Laboratory of Biomedical Materials, Beijing University of Chemical Technology, Beijing 100029 (China); Deng, Xuliang [Department of Geriatric Dentistry, Peking University School and Hospital of Stomatology, Beijing 100081 (China); Yang, Xiaoping, E-mail: yangxp@mail.buct.edu.cn [State Key Laboratory of Organic–inorganic Composites, Beijing University of Chemical Technology, Beijing 100029 (China); Beijing Laboratory of Biomedical Materials, Beijing University of Chemical Technology, Beijing 100029 (China)

2015-10-01

Proliferation and differentiation of bone-related cells are modulated by many factors such as scaffold design, growth factor, dynamic culture system, and physical simulation. Nanofibrous structure and moderate-intensity (1 mT–1 T) static magnetic field (SMF) have been identified as capable of stimulating proliferation and differentiation of osteoblasts. Herein, magnetic nanofibers were prepared by electrospinning mixture solutions of poly(L-lactide) (PLLA) and ferromagnetic Fe{sub 3}O{sub 4} nanoparticles (NPs). The PLLA/Fe{sub 3}O{sub 4} composite nanofibers demonstrated homogeneous dispersion of Fe{sub 3}O{sub 4} NPs, and their magnetism depended on the contents of Fe{sub 3}O{sub 4} NPs. SMF of 100 mT was applied in the culture of MC3T3-E1 osteoblasts on pure PLLA and PLLA/Fe{sub 3}O{sub 4} composite nanofibers for the purpose of studying the effect of SMF on osteogenic differentiation of osteoblastic cells on magnetic nanofibrous scaffolds. On non-magnetic PLLA nanofibers, the application of external SMF could enhance the proliferation and osteogenic differentiation of MC3T3-E1 cells. In comparison with pure PLLA nanofibers, the incorporation of Fe{sub 3}O{sub 4} NPs could also promote the proliferation and osteogenic differentiation of MC3T3-E1 cells in the absence or presence of external SMF. The marriage of magnetic nanofibers and external SMF was found most effective in accelerating every aspect of biological behaviors of MC3T3-E1 osteoblasts. The findings demonstrated that the magnetic feature of substrate and microenvironment were applicable ways in regulating osteogenesis in bone tissue engineering. - Highlights: • Magnetic nanofibers containing well-dispersed Fe{sub 3}O{sub 4} nanoparticles were produced. • Static magnetic field (SMF) was applied to perform the culture of osteoblasts. • Osteogenic differentiation was enhanced on magnetic substrate with exposure to SMF.

SU-E-T-490: Independent Three-Dimensional (3D) Dose Verification of VMAT/SBRT Using EPID and Cloud Computing

Energy Technology Data Exchange (ETDEWEB)

Ding, A; Han, B; Bush, K; Wang, L; Xing, L [Stanford University School of Medicine, Stanford, CA (United States)

2015-06-15

Purpose: Dosimetric verification of VMAT/SBRT is currently performed on one or two planes in a phantom with either film or array detectors. A robust and easy-to-use 3D dosimetric tool has been sought since the advent of conformal radiation therapy. Here we present such a strategy for independent 3D VMAT/SBRT plan verification system by a combined use of EPID and cloud-based Monte Carlo (MC) dose calculation. Methods: The 3D dosimetric verification proceeds in two steps. First, the plan was delivered with a high resolution portable EPID mounted on the gantry, and the EPID-captured gantry-angle-resolved VMAT/SBRT field images were converted into fluence by using the EPID pixel response function derived from MC simulations. The fluence was resampled and used as the input for an in-house developed Amazon cloud-based MC software to reconstruct the 3D dose distribution. The accuracy of the developed 3D dosimetric tool was assessed using a Delta4 phantom with various field sizes (square, circular, rectangular, and irregular MLC fields) and different patient cases. The method was applied to validate VMAT/SBRT plans using WFF and FFF photon beams (Varian TrueBeam STX). Results: It was found that the proposed method yielded results consistent with the Delta4 measurements. For points on the two detector planes, a good agreement within 1.5% were found for all the testing fields. Patient VMAT/SBRT plan studies revealed similar level of accuracy: an average γ-index passing rate of 99.2± 0.6% (3mm/3%), 97.4± 2.4% (2mm/2%), and 72.6± 8.4 % ( 1mm/1%). Conclusion: A valuable 3D dosimetric verification strategy has been developed for VMAT/SBRT plan validation. The technique provides a viable solution for a number of intractable dosimetry problems, such as small fields and plans with high dose gradient.

SU-E-T-490: Independent Three-Dimensional (3D) Dose Verification of VMAT/SBRT Using EPID and Cloud Computing

International Nuclear Information System (INIS)

Ding, A; Han, B; Bush, K; Wang, L; Xing, L

2015-01-01

Purpose: Dosimetric verification of VMAT/SBRT is currently performed on one or two planes in a phantom with either film or array detectors. A robust and easy-to-use 3D dosimetric tool has been sought since the advent of conformal radiation therapy. Here we present such a strategy for independent 3D VMAT/SBRT plan verification system by a combined use of EPID and cloud-based Monte Carlo (MC) dose calculation. Methods: The 3D dosimetric verification proceeds in two steps. First, the plan was delivered with a high resolution portable EPID mounted on the gantry, and the EPID-captured gantry-angle-resolved VMAT/SBRT field images were converted into fluence by using the EPID pixel response function derived from MC simulations. The fluence was resampled and used as the input for an in-house developed Amazon cloud-based MC software to reconstruct the 3D dose distribution. The accuracy of the developed 3D dosimetric tool was assessed using a Delta4 phantom with various field sizes (square, circular, rectangular, and irregular MLC fields) and different patient cases. The method was applied to validate VMAT/SBRT plans using WFF and FFF photon beams (Varian TrueBeam STX). Results: It was found that the proposed method yielded results consistent with the Delta4 measurements. For points on the two detector planes, a good agreement within 1.5% were found for all the testing fields. Patient VMAT/SBRT plan studies revealed similar level of accuracy: an average γ-index passing rate of 99.2± 0.6% (3mm/3%), 97.4± 2.4% (2mm/2%), and 72.6± 8.4 % ( 1mm/1%). Conclusion: A valuable 3D dosimetric verification strategy has been developed for VMAT/SBRT plan validation. The technique provides a viable solution for a number of intractable dosimetry problems, such as small fields and plans with high dose gradient

Practical cloud evaluation from a Nordic eScience user perspective

DEFF Research Database (Denmark)

Edlund, Åke; Koopmans, Maarten; Shah, Zeeshan Ali

2011-01-01

In this paper, we describe the findings of the NEON project - a cross-Nordic - Sweden, Norway, Denmark, Finland and Iceland - project evaluating the usefulness of private versus public cloud services for HPC users. Our findings are briefly that private cloud technology is not mature enough yet...... to provide a transparent user experience. It is expected that this will be the case mid 2012. The cost efficiency of both public and private cloud should be continuously monitored as there is a strong downward trend. This conclusion is supported by NEON experimenting as well as larger initiatives e.......g. StratusLab reports. Public cloud technology is mature enough but lacks certain features that will be necessary to include cloud resources in a transparent manner in a national infrastructure like the Norwegian NOTUR (www.notur.no) case, e.g. with respect to quota management. These features are expected...

The role of non-thermal atmospheric pressure biocompatible plasma in the differentiation of osteoblastic precursor cells, MC3T3-E1.

Science.gov (United States)

Han, Ihn; Choi, Eun Ha

2017-05-30

Non-thermal atmospheric pressure plasma is ionized matter, composed of highly reactive species that include positive ions, negative ions, free radicals, neutral atoms, and molecules. Recent reports have suggested that non-thermal biocompatible plasma (NBP) can selectively kill a variety of cancer cells, and promote stem cell differentiation. However as of yet, the regulation of proliferation and differentiation potential of NBP has been poorly understood.Here, we investigated the effects of NBP on the osteogenic differentiation of precursor cell lines of osteoblasts, MC3T3 E1 and SaOS-2. For in vitro osteogenic differentiation, precursor cell lines were treated with NBP, and cultured with osteogenic induction medium. After 10 days of treatment, the NBP was shown to be effective in osteogenic differentiation in MC3T3 E1 cells by von Kossa and Alizarin Red S staining assay. Real-time PCR was then performed to investigate the expression of osteogenic specific genes, Runx2, OCN, COL1, ALP and osterix in MC3T3 E1 cells after treatment with NBP for 4 days. Furthermore, analysis of the protein expression showed that NBP treatment significantly reduced PI3K/AKT signaling and MAPK family signaling. However, p38 controlled phosphorylation of transcription factor forkhead box O1 (FoxO1) that related to cell differentiation with increased phosphorylated p38. These results suggest that non-thermal atmospheric pressure plasma can induce osteogenic differentiation, and enhance bone formation.

7-ketocholesterol induces apoptosis of MC3T3-E1 cells associated with reactive oxygen species generation, endoplasmic reticulum stress and caspase-3/7 dependent pathway

Directory of Open Access Journals (Sweden)

Yuta Sato

2017-03-01

Full Text Available Type 2 diabetes mellitus (T2DM is associated with an increased risk of bone fractures without reduction of bone mineral density. The cholesterol oxide 7-ketocholesterol (7KCHO has been implicated in numerous diseases such as atherosclerosis, Alzheimer's disease, Parkinson's disease, cancer, age-related macular degeneration and T2DM. In the present study, 7KCHO decreased the viability of MC3T3-E1 cells, increased reactive oxygen species (ROS production and apoptotic rate, and upregulated the caspase-3/7 pathway. Furthermore, these effects of 7KCHO were abolished by pre-incubation of the cells with N-acetylcysteine (NAC, an ROS inhibitor. Also, 7KCHO enhanced the mRNA expression of two endoplasmic reticulum (ER stress markers; CHOP and GRP78, in MC3T3-E1 cells. Pre-incubation of the cells with NAC suppressed the 7KCHO-induced upregulation of CHOP, but not GRP78. In conclusion, we demonstrated that 7KCHO induced apoptosis of MC3T3-E1 cells associated with ROS generation, ER stress, and caspase-3/7 activity, and the effects of 7KCHO were abolished by the ROS inhibitor NAC. These findings may provide new insight into the relationship between oxysterol and pathophysiology of osteoporosis seen in T2DM.

An Exploratory Study of the Experiences of Recent Graduates Who Participated in the Ronald E. McNair Postbaccalaureate Achievement Program

Science.gov (United States)

Thomas, Zaducka T. C.

2012-01-01

The purpose of this qualitative study was to explore the experiences of recent graduates who participated in the Ronald E. McNair Postbaccalaureate Achievement Program at a medium-size southeastern university. This research used a phenomenological approach, as well as qualitative interviews, to provide a detailed and insightful description about…

Effects of 2-deoxy-D-glucose and quercetin on the expression of osteonectin and osteopontin during the differentiation of irradiated MC3T3-E1 osteoblastic cells

International Nuclear Information System (INIS)

Yu, Su Kyung; Koh, Kwang Joon; Kim, Kyoung A

2008-01-01

To characterize the effects of 2-deoxy-D-glucose (2-DG) and quercetin (QCT) on gene expression of osteonectin (ON) and osteopontin (OP) in irradiated MC3T3-E1 cells. When MC3T3-E1 osteoblastic cells had reached 70-80% confluence, cultures were transferred to a differentiating medium supplemented with 5 mM 2-DG or 10 μM QCT and then irradiated with 2, 4, 6, and 8 Gy. At various times after irradiation, the cells were analyzed for the expression of bone mineralization genes such as ON and OP. The mRNA expression of both ON and OP was increased according to the culture time in the differentiation medium, and the increase of the genes peaked at 14 days after the differentiation induction. In the case of OP, the increase of mRNA expression was maintained to 28 days after the differentiation, while the mRNA level of ON was reduced to the basal level at the same time. Irradiation adding 2-DG showed a significant peak value in the expression pattern of ON at 4 Gy 7 days after irradiation. Irradiation adding QCT increased the mRNA expression of ON and OP in a dose-dependant manner, but irradiation adding 2-DG did not show any differences between the control and experiments 14 days after irradiation. Irradiation adding QCT increased significantly the expression patterns of ON 21 days after irradiation. The results showed that QCT acted as a radiosensitizer in the gene expression of ON and OP during differentiation of the late stage of irradiated MC3T3-E1 osteoblastic cells in vitro.

Low-intensity pulsed ultrasound (LIPUS) stimulates mineralization of MC3T3-E1 cells through calcium and phosphate uptake.

Science.gov (United States)

Tassinary, João Alberto Fioravante; Lunardelli, Adroaldo; Basso, Bruno de Souza; Dias, Henrique Bregolin; Catarina, Anderson Velasque; Stülp, Simone; Haute, Gabriela Viegas; Martha, Bianca Andrade; Melo, Denizar Alberto da Silva; Nunes, Fernanda Bordignon; Donadio, Márcio Vinícius Fagundes; Oliveira, Jarbas Rodrigues de

2018-03-01

The present study aimed to evaluate the effect of low-intensity pulsed ultrasound (LIPUS) on pre-osteoblast mineralization using in vitro bioassays. Pre-osteoblastic MC3T3-E1 cells were exposed to LIPUS at 1 MHz frequency, 0.2 W/cm 2 intensity and 20% duty cycle for 30 min. The analyses were carried out up to 336 h (14 days) after exposure. The concentration of collagen, phosphate, alkaline phosphatase, calcium and transforming growth factor beta 1 (TGF-β1) in cell supernatant and the presence of calcium deposits in the cells were analyzed. Our results showed that LIPUS promotes mineralized nodules formation. Collagen, phosphate, and calcium levels were decreased in cell supernatant at 192 h after LIPUS exposure. However, alkaline phosphatase and TGF-β1 concentrations remained unchanged. Therapeutic pulsed ultrasound is capable of stimulating differentiation and mineralization of pre-osteoblastic MC3T3-E1 cells by calcium and phosphate uptake with consequent hydroxyapatite formation. Copyright © 2017 Elsevier B.V. All rights reserved.

Sensitivity of Cirrus and Mixed-phase Clouds to the Ice Nuclei Spectra in McRAS-AC: Single Column Model Simulations

Science.gov (United States)

Betancourt, R. Morales; Lee, D.; Oreopoulos, L.; Sud, Y. C.; Barahona, D.; Nenes, A.

2012-01-01

The salient features of mixed-phase and ice clouds in a GCM cloud scheme are examined using the ice formation parameterizations of Liu and Penner (LP) and Barahona and Nenes (BN). The performance of LP and BN ice nucleation parameterizations were assessed in the GEOS-5 AGCM using the McRAS-AC cloud microphysics framework in single column mode. Four dimensional assimilated data from the intensive observation period of ARM TWP-ICE campaign was used to drive the fluxes and lateral forcing. Simulation experiments where established to test the impact of each parameterization in the resulting cloud fields. Three commonly used IN spectra were utilized in the BN parameterization to described the availability of IN for heterogeneous ice nucleation. The results show large similarities in the cirrus cloud regime between all the schemes tested, in which ice crystal concentrations were within a factor of 10 regardless of the parameterization used. In mixed-phase clouds there are some persistent differences in cloud particle number concentration and size, as well as in cloud fraction, ice water mixing ratio, and ice water path. Contact freezing in the simulated mixed-phase clouds contributed to transfer liquid to ice efficiently, so that on average, the clouds were fully glaciated at T approximately 260K, irrespective of the ice nucleation parameterization used. Comparison of simulated ice water path to available satellite derived observations were also performed, finding that all the schemes tested with the BN parameterization predicted 20 average values of IWP within plus or minus 15% of the observations.

Automated Grid Monitoring for the LHCb Experiment Through HammerCloud

CERN Document Server

Dice, Bradley

2015-01-01

The HammerCloud system is used by CERN IT to monitor the status of the Worldwide LHC Computing Grid (WLCG). HammerCloud automatically submits jobs to WLCG computing resources, closely replicating the workflow of Grid users (e.g. physicists analyzing data). This allows computation nodes and storage resources to be monitored, software to be tested (somewhat like continuous integration), and new sites to be stress tested with a heavy job load before commissioning. The HammerCloud system has been in use for ATLAS and CMS experiments for about five years. This summer's work involved porting the HammerCloud suite of tools to the LHCb experiment. The HammerCloud software runs functional tests and provides data visualizations. HammerCloud's LHCb variant is written in Python, using the Django web framework and Ganga/DIRAC for job management.

Results from the CERN pilot CLOUD experiment

CERN Document Server

Duplissy, J; Reichl, U; Winkler, P M; Pedersen, E; Makhmutov, V; Viisanen, Y; Kulmala, M; Wilhelmsson, M; Weingartner, E; Avngaard, M; Curtius, J; Veenhof, R; Laakso, L; Gagne, S; Harrison, R G; Sipila, M; David, A; Seinfeld, J H; Nieminen, T; Verheggen, B; Aplin, K L; Stratmann, F; Arnold, F; Makela, J; Kellett, B; Fastrup, B; Marsh, N D; Lockwood, M; Carslaw, K; Wehrle, G; Aufmhoff, H; Pedersen, J O P; Baltensperger, U; Onnela, A; Laaksonen, A; Enghoff, M B; Svensmark, J; Wex, H; Lillestol, E; Wagner, P E; Kirkby, J; Stozhkov, Y; Polny, J; Bondo, T; Bingham, R; Svensmark, H

2010-01-01

During a 4-week run in October-November 2006, a pilot experiment was performed at the CERN Proton Synchrotron in preparation for the Cosmics Leaving OUtdoor Droplets (CLOUD) experiment, whose aim is to study the possible influence of cosmic rays on clouds. The purpose of the pilot experiment was firstly to carry out exploratory measurements of the effect of ionising particle radiation on aerosol formation from trace H2SO4 vapour and secondly to provide technical input for the CLOUD design. A total of 44 nucleation bursts were produced and recorded, with formation rates of particles above the 3 nm detection threshold of between 0.1 and 100 cm(-3) s(-1), and growth rates between 2 and 37 nm h(-1). The corresponding H2SO4 concentrations were typically around 10(6) cm(-3) or less. The experimentally-measured formation rates and H2SO4 concentrations are comparable to those found in the atmosphere, supporting the idea that sulphuric acid is involved in the nucleation of atmospheric aerosols. However, sulphuric acid...

A Proposed Smart E-Learning System Using Cloud Computing Services: PaaS, IaaS and Web 3.0

Directory of Open Access Journals (Sweden)

Dr.Mona M. Nasr

2012-09-01

Full Text Available E-learning systems need to improve its infrastructure, which can devote the required computation and storage resources for e-learning systems. Microsoft cloud computing technologies although in their early stages, have managed to change the way applications are going to be developed and accessed. The objective of the paper is to combine various technologies to design architecture which describe E-learning systems. Web 3.0 uses widget aggregation, intelligent retrieval, user interest modeling and semantic annotation. These technologies are aimed at running applications as services over the internet on a flexible infrastructure. Cloud computing provides a low cost solution to academic institutions for their researchers, faculty and learners. In this paper we integrate cloud computing as a platform with web 3.0 for building intelligent e-learning systems.

BlueSky Cloud Framework: An E-Learning Framework Embracing Cloud Computing

Science.gov (United States)

Dong, Bo; Zheng, Qinghua; Qiao, Mu; Shu, Jian; Yang, Jie

Currently, E-Learning has grown into a widely accepted way of learning. With the huge growth of users, services, education contents and resources, E-Learning systems are facing challenges of optimizing resource allocations, dealing with dynamic concurrency demands, handling rapid storage growth requirements and cost controlling. In this paper, an E-Learning framework based on cloud computing is presented, namely BlueSky cloud framework. Particularly, the architecture and core components of BlueSky cloud framework are introduced. In BlueSky cloud framework, physical machines are virtualized, and allocated on demand for E-Learning systems. Moreover, BlueSky cloud framework combines with traditional middleware functions (such as load balancing and data caching) to serve for E-Learning systems as a general architecture. It delivers reliable, scalable and cost-efficient services to E-Learning systems, and E-Learning organizations can establish systems through these services in a simple way. BlueSky cloud framework solves the challenges faced by E-Learning, and improves the performance, availability and scalability of E-Learning systems.

34 CFR 647.1 - What is the Ronald E. McNair Postbaccalaureate Achievement Program?

Science.gov (United States)

2010-07-01

... 34 Education 3 2010-07-01 2010-07-01 false What is the Ronald E. McNair Postbaccalaureate... (Continued) OFFICE OF POSTSECONDARY EDUCATION, DEPARTMENT OF EDUCATION RONALD E. MCNAIR POSTBACCALAUREATE ACHIEVEMENT PROGRAM General § 647.1 What is the Ronald E. McNair Postbaccalaureate Achievement Program? The...

Effect of surface topography and bioactive properties on early adhesion and growth behavior of mouse preosteoblast MC3T3-E1 cells.

Science.gov (United States)

Li, Na; Chen, Gang; Liu, Jue; Xia, Yang; Chen, Hanbang; Tang, Hui; Zhang, Feimin; Gu, Ning

2014-10-08

The effects of bioactive properties and surface topography of biomaterials on the adhesion and spreading properties of mouse preosteoblast MC3T3-E1 cells was investigated by preparation of different surfaces. Poly lactic-co-glycolic acid (PLGA) electrospun fibers (ES) were produced as a porous rough surface. In our study, coverslips were used as a substrate for the immobilization of 3,4-dihydroxyphenylalanine (DOPA) and collagen type I (COL I) in the preparation of bioactive surfaces. In addition, COL I was immobilized onto porous electrospun fibers surfaces (E-COL) to investigate the combined effects of bioactive molecules and topography. Untreated coverslips were used as controls. Early adhesion and growth behavior of MC3T3-E1 cells cultured on the different surfaces were studied at 6, 12, and 24 h. Evaluation of cell adhesion and morphological changes showed that the all the surfaces were favorable for promoting the adhesion and spreading of cells. CCK-8 assays and flow cytometry revealed that both topography and bioactive properties were favorable for cell growth. Analysis of β1, α1, α2, α5, α10 and α11 integrin expression levels by immunofluorescence, real-time RT-PCR, and Western blot and indicated that surface topography plays an important role in the early stage of cell adhesion. However, the influence of topography and bioactive properties of surfaces on integrins is variable. Compared with any of the topographic or bioactive properties in isolation, the combined effect of both types of properties provided an advantage for the growth and spreading of MC3T3-E1 cells. This study provides a new insight into the functions and effects of topographic and bioactive modifications of surfaces at the interface between cells and biomaterials for tissue engineering.

Protection by the flavonoids quercetin and luteolin against peroxide- or menadione-induced oxidative stress in MC3T3-E1 osteoblast cells.

Science.gov (United States)

Fatokun, Amos A; Tome, Mercedes; Smith, Robert A; Darlington, L Gail; Stone, Trevor W

2015-01-01

Potential protective effects of the flavonoids quercetin and luteolin have been examined against the oxidative stress of MC3T3-E1 osteoblast-like cells. Although hydrogen peroxide and menadione reduced cell viability, the toxicity was prevented by desferrioxamine or catalase but not superoxide dismutase, suggesting the involvement of hydrogen peroxide in both cases. Quercetin and luteolin reduced the oxidative damage, especially that caused by hydrogen peroxide. When cultures were pre-incubated with quercetin or luteolin, protection was reduced or lost. Protection was also reduced when a 24 h pre-incubation with the flavonoids was followed by exposure to menadione alone. Pretreating cultures with luteolin impaired protection by quercetin, whereas quercetin pretreatment did not affect protection by luteolin. It is concluded that quercetin and luteolin suppress oxidative damage to MC3T3-E1 cells, especially caused by peroxide. The reduction in protection by pretreatment implies a down-regulation of part of the toxic transduction pathway.

SU-E-T-314: The Application of Cloud Computing in Pencil Beam Scanning Proton Therapy Monte Carlo Simulation

Energy Technology Data Exchange (ETDEWEB)

Wang, Z [Reading Hospital, West Reading, PA (United States); Gao, M [ProCure Treatment Centers, Warrenville, IL (United States)

2014-06-01

Purpose: Monte Carlo simulation plays an important role for proton Pencil Beam Scanning (PBS) technique. However, MC simulation demands high computing power and is limited to few large proton centers that can afford a computer cluster. We study the feasibility of utilizing cloud computing in the MC simulation of PBS beams. Methods: A GATE/GEANT4 based MC simulation software was installed on a commercial cloud computing virtual machine (Linux 64-bits, Amazon EC2). Single spot Integral Depth Dose (IDD) curves and in-air transverse profiles were used to tune the source parameters to simulate an IBA machine. With the use of StarCluster software developed at MIT, a Linux cluster with 2–100 nodes can be conveniently launched in the cloud. A proton PBS plan was then exported to the cloud where the MC simulation was run. Results: The simulated PBS plan has a field size of 10×10cm{sup 2}, 20cm range, 10cm modulation, and contains over 10,000 beam spots. EC2 instance type m1.medium was selected considering the CPU/memory requirement and 40 instances were used to form a Linux cluster. To minimize cost, master node was created with on-demand instance and worker nodes were created with spot-instance. The hourly cost for the 40-node cluster was $0.63 and the projected cost for a 100-node cluster was $1.41. Ten million events were simulated to plot PDD and profile, with each job containing 500k events. The simulation completed within 1 hour and an overall statistical uncertainty of < 2% was achieved. Good agreement between MC simulation and measurement was observed. Conclusion: Cloud computing is a cost-effective and easy to maintain platform to run proton PBS MC simulation. When proton MC packages such as GATE and TOPAS are combined with cloud computing, it will greatly facilitate the pursuing of PBS MC studies, especially for newly established proton centers or individual researchers.

SU-E-T-314: The Application of Cloud Computing in Pencil Beam Scanning Proton Therapy Monte Carlo Simulation

International Nuclear Information System (INIS)

Wang, Z; Gao, M

2014-01-01

Purpose: Monte Carlo simulation plays an important role for proton Pencil Beam Scanning (PBS) technique. However, MC simulation demands high computing power and is limited to few large proton centers that can afford a computer cluster. We study the feasibility of utilizing cloud computing in the MC simulation of PBS beams. Methods: A GATE/GEANT4 based MC simulation software was installed on a commercial cloud computing virtual machine (Linux 64-bits, Amazon EC2). Single spot Integral Depth Dose (IDD) curves and in-air transverse profiles were used to tune the source parameters to simulate an IBA machine. With the use of StarCluster software developed at MIT, a Linux cluster with 2–100 nodes can be conveniently launched in the cloud. A proton PBS plan was then exported to the cloud where the MC simulation was run. Results: The simulated PBS plan has a field size of 10×10cm 2 , 20cm range, 10cm modulation, and contains over 10,000 beam spots. EC2 instance type m1.medium was selected considering the CPU/memory requirement and 40 instances were used to form a Linux cluster. To minimize cost, master node was created with on-demand instance and worker nodes were created with spot-instance. The hourly cost for the 40-node cluster was $0.63 and the projected cost for a 100-node cluster was $1.41. Ten million events were simulated to plot PDD and profile, with each job containing 500k events. The simulation completed within 1 hour and an overall statistical uncertainty of < 2% was achieved. Good agreement between MC simulation and measurement was observed. Conclusion: Cloud computing is a cost-effective and easy to maintain platform to run proton PBS MC simulation. When proton MC packages such as GATE and TOPAS are combined with cloud computing, it will greatly facilitate the pursuing of PBS MC studies, especially for newly established proton centers or individual researchers

Sirtuin1 promotes osteogenic differentiation through downregulation of peroxisome proliferator-activated receptor γ in MC3T3-E1 cells

International Nuclear Information System (INIS)

Qu, Bo; Ma, Yuan; Yan, Ming; Gong, Kai; Liang, Feng; Deng, Shaolin; Jiang, Kai; Ma, Zehui; Pan, Xianming

2016-01-01

Osteoporosis is a skeletal disorder characterized by bone loss, resulting in architectural deterioration of the skeleton, decreased bone strength and an increased risk of fragility fractures. Strengthening osteogenesis is an effective way to relieve osteoporosis. Sirtuin1 (Sirt1) is a nicotinamide adenine dinucleotide (NAD"+)-dependent deacetylase, which is reported to be involved in improving osteogenesis. Sirt1 targets peroxisome proliferator-activated receptor γ (PPARγ) in the regulation of adipose tissues; however, the molecular mechanism of Sirt1 in osteogenic differentiation is still unknown. PPARγ tends to induce more adipogenic differentiation rather than osteogenic differentiation. Hence, we hypothesized that Sirt1 facilitates osteogenic differentiation through downregulation of PPARγ signaling. Mouse pre-osteoblastic MC3T3-E1 cells were cultured under osteogenic medium. Sirt1 was overexpressed through plasmid transfection. The results showed that high expression of Sirt1 was associated with increased osteogenic differentiation, as indicated by quantitative PCR and Western blot analysis of osteogenic markers, and Von Kossa staining. Sirt1 overexpression also directly and negatively regulated the expression of PPARγ and its downstream molecules. Use of the PPARγ agonist Rosiglitazone, reversed the effects of Sirt1 on osteogenic differentiation. Using constructed luciferase plasmids, we demonstrated a role of Sirt1 in inhibiting PPARγ–induced activity and expression of adipocyte–specific genes, including acetyl-coenzyme A carboxylase (Acc) and fatty acid binding protein 4 (Fabp4). The interaction between Sirt1 and PPARγ was further confirmed using co-immunoprecipitation analysis. Together, these results reveal a novel mechanism for Sirt1 in osteogenic differentiation through downregulation of PPARγ activity. These findings suggest that the Sirt1–PPARγ pathway may represent a potential target for enhancement of osteogenesis and treatment of

Sirtuin1 promotes osteogenic differentiation through downregulation of peroxisome proliferator-activated receptor γ in MC3T3-E1 cells

Energy Technology Data Exchange (ETDEWEB)

Qu, Bo [Department of Orthopaedics, Chengdu Military General Hospital, Chengdu 610083 (China); Ma, Yuan [Department of Neurosurgery, Chengdu Military General Hospital, Chengdu 610083 (China); Yan, Ming [Department of Orthopaedics, Xijing Hospital of The Fourth Military Medical University, Xi’an 710032 (China); Gong, Kai; Liang, Feng; Deng, Shaolin; Jiang, Kai; Ma, Zehui [Department of Orthopaedics, Chengdu Military General Hospital, Chengdu 610083 (China); Pan, Xianming, E-mail: xianmingpanxj@163.com [Department of Orthopaedics, Chengdu Military General Hospital, Chengdu 610083 (China)

2016-09-09

Osteoporosis is a skeletal disorder characterized by bone loss, resulting in architectural deterioration of the skeleton, decreased bone strength and an increased risk of fragility fractures. Strengthening osteogenesis is an effective way to relieve osteoporosis. Sirtuin1 (Sirt1) is a nicotinamide adenine dinucleotide (NAD{sup +})-dependent deacetylase, which is reported to be involved in improving osteogenesis. Sirt1 targets peroxisome proliferator-activated receptor γ (PPARγ) in the regulation of adipose tissues; however, the molecular mechanism of Sirt1 in osteogenic differentiation is still unknown. PPARγ tends to induce more adipogenic differentiation rather than osteogenic differentiation. Hence, we hypothesized that Sirt1 facilitates osteogenic differentiation through downregulation of PPARγ signaling. Mouse pre-osteoblastic MC3T3-E1 cells were cultured under osteogenic medium. Sirt1 was overexpressed through plasmid transfection. The results showed that high expression of Sirt1 was associated with increased osteogenic differentiation, as indicated by quantitative PCR and Western blot analysis of osteogenic markers, and Von Kossa staining. Sirt1 overexpression also directly and negatively regulated the expression of PPARγ and its downstream molecules. Use of the PPARγ agonist Rosiglitazone, reversed the effects of Sirt1 on osteogenic differentiation. Using constructed luciferase plasmids, we demonstrated a role of Sirt1 in inhibiting PPARγ–induced activity and expression of adipocyte–specific genes, including acetyl-coenzyme A carboxylase (Acc) and fatty acid binding protein 4 (Fabp4). The interaction between Sirt1 and PPARγ was further confirmed using co-immunoprecipitation analysis. Together, these results reveal a novel mechanism for Sirt1 in osteogenic differentiation through downregulation of PPARγ activity. These findings suggest that the Sirt1–PPARγ pathway may represent a potential target for enhancement of osteogenesis and treatment

Monte Carlo dose calculation improvements for low energy electron beams using eMC

International Nuclear Information System (INIS)

Fix, Michael K; Frei, Daniel; Volken, Werner; Born, Ernst J; Manser, Peter; Neuenschwander, Hans

2010-01-01

The electron Monte Carlo (eMC) dose calculation algorithm in Eclipse (Varian Medical Systems) is based on the macro MC method and is able to predict dose distributions for high energy electron beams with high accuracy. However, there are limitations for low energy electron beams. This work aims to improve the accuracy of the dose calculation using eMC for 4 and 6 MeV electron beams of Varian linear accelerators. Improvements implemented into the eMC include (1) improved determination of the initial electron energy spectrum by increased resolution of mono-energetic depth dose curves used during beam configuration; (2) inclusion of all the scrapers of the applicator in the beam model; (3) reduction of the maximum size of the sphere to be selected within the macro MC transport when the energy of the incident electron is below certain thresholds. The impact of these changes in eMC is investigated by comparing calculated dose distributions for 4 and 6 MeV electron beams at source to surface distance (SSD) of 100 and 110 cm with applicators ranging from 6 x 6 to 25 x 25 cm 2 of a Varian Clinac 2300C/D with the corresponding measurements. Dose differences between calculated and measured absolute depth dose curves are reduced from 6% to less than 1.5% for both energies and all applicators considered at SSD of 100 cm. Using the original eMC implementation, absolute dose profiles at depths of 1 cm, d max and R50 in water lead to dose differences of up to 8% for applicators larger than 15 x 15 cm 2 at SSD 100 cm. Those differences are now reduced to less than 2% for all dose profiles investigated when the improved version of eMC is used. At SSD of 110 cm the dose difference for the original eMC version is even more pronounced and can be larger than 10%. Those differences are reduced to within 2% or 2 mm with the improved version of eMC. In this work several enhancements were made in the eMC algorithm leading to significant improvements in the accuracy of the dose calculation

Monte Carlo dose calculation improvements for low energy electron beams using eMC.

Science.gov (United States)

Fix, Michael K; Frei, Daniel; Volken, Werner; Neuenschwander, Hans; Born, Ernst J; Manser, Peter

2010-08-21

The electron Monte Carlo (eMC) dose calculation algorithm in Eclipse (Varian Medical Systems) is based on the macro MC method and is able to predict dose distributions for high energy electron beams with high accuracy. However, there are limitations for low energy electron beams. This work aims to improve the accuracy of the dose calculation using eMC for 4 and 6 MeV electron beams of Varian linear accelerators. Improvements implemented into the eMC include (1) improved determination of the initial electron energy spectrum by increased resolution of mono-energetic depth dose curves used during beam configuration; (2) inclusion of all the scrapers of the applicator in the beam model; (3) reduction of the maximum size of the sphere to be selected within the macro MC transport when the energy of the incident electron is below certain thresholds. The impact of these changes in eMC is investigated by comparing calculated dose distributions for 4 and 6 MeV electron beams at source to surface distance (SSD) of 100 and 110 cm with applicators ranging from 6 x 6 to 25 x 25 cm(2) of a Varian Clinac 2300C/D with the corresponding measurements. Dose differences between calculated and measured absolute depth dose curves are reduced from 6% to less than 1.5% for both energies and all applicators considered at SSD of 100 cm. Using the original eMC implementation, absolute dose profiles at depths of 1 cm, d(max) and R50 in water lead to dose differences of up to 8% for applicators larger than 15 x 15 cm(2) at SSD 100 cm. Those differences are now reduced to less than 2% for all dose profiles investigated when the improved version of eMC is used. At SSD of 110 cm the dose difference for the original eMC version is even more pronounced and can be larger than 10%. Those differences are reduced to within 2% or 2 mm with the improved version of eMC. In this work several enhancements were made in the eMC algorithm leading to significant improvements in the accuracy of the dose

Retrievals of Ice Cloud Microphysical Properties of Deep Convective Systems using Radar Measurements

Science.gov (United States)

Tian, J.; Dong, X.; Xi, B.; Wang, J.; Homeyer, C. R.

2015-12-01

This study presents innovative algorithms for retrieving ice cloud microphysical properties of Deep Convective Systems (DCSs) using Next-Generation Radar (NEXRAD) reflectivity and newly derived empirical relationships from aircraft in situ measurements in Wang et al. (2015) during the Midlatitude Continental Convective Clouds Experiment (MC3E). With composite gridded NEXRAD radar reflectivity, four-dimensional (space-time) ice cloud microphysical properties of DCSs are retrieved, which is not possible from either in situ sampling at a single altitude or from vertical pointing radar measurements. For this study, aircraft in situ measurements provide the best-estimated ice cloud microphysical properties for validating the radar retrievals. Two statistical comparisons between retrieved and aircraft in situ measured ice microphysical properties are conducted from six selected cases during MC3E. For the temporal-averaged method, the averaged ice water content (IWC) and median mass diameter (Dm) from aircraft in situ measurements are 0.50 g m-3 and 1.51 mm, while the retrievals from radar reflectivity have negative biases of 0.12 g m-3 (24%) and 0.02 mm (1.3%) with correlations of 0.71 and 0.48, respectively. For the spatial-averaged method, the IWC retrievals are closer to the aircraft results (0.51 vs. 0.47 g m-3) with a positive bias of 8.5%, whereas the Dm retrievals are larger than the aircraft results (1.65 mm vs. 1.51 mm) with a positive bias of 9.3%. The retrieved IWCs decrease from ~0.6 g m-3 at 5 km to ~0.15 g m-3 at 13 km, and Dm values decrease from ~2 mm to ~0.7 mm at the same levels. In general, the aircraft in situ measured IWC and Dm values at each level are within one standard derivation of retrieved properties. Good agreements between microphysical properties measured from aircraft and retrieved from radar reflectivity measurements indicate the reasonable accuracy of our retrievals.

[Effect of NF-κB on the expression of interleukin-6 induced by lipopolysaccharides of Porphyromonas endodontalis in MC3T3-E1 cells].

Science.gov (United States)

Yu, Ya-qiong; Guo, Jia-jie; Qiu, Li-hong; Lv, You; Jia, Ge; Guo, Yan

2013-08-01

To investigate the effect of NF-κB signaling on the expression of interleukin-6(IL-6) induced by lipopolysaccharides(LPS) extracted from Porphyromonas endodontalis(P.e) in MC3T3-El cells. MC3T3-E1 cells were pretreated with BAY-117082 for 1 h, and then were treated with 10 mg/L P.e-LPS for different times. The translocation of NF-κB was observed by immunofluorescence. The expression of IL-6 was detected by reverse transcription polymerse chain reaction (RT-PCR) and enzyme-linked immuno sorbent assay (ELISA). Statistical analysis was performed using multi-way ANOVA and Dunnett's t test with SPSS 13.0 software package. The staining of NF-κB was mostly in cytoplasm in untreated cells. Rapid translocation of NF-κB into nucleus was observed in the cells stimulated for 30 min and mostly relocalization of NF-κB from nucleus to cytoplasm was observed after 60 min. Pretreatment with 10 μmol/L BAY-117082 for 1h significantly inhibited P.e-LPS-induced translocation of NF-κB .The mRNA and proteins of IL-6 decreased significantly after pretreatment with 10 μmol/L BAY-117082 and the expression of IL-6 proteins was reduced from (774.983±6.585) ng/L to (377.384±14.620) ng/L (P<0.01). The group of treatment with BAY-117082 alone had no significant difference from the blank control group. P.e-LPS can induce translocation of NF-κB in mouse osteoblast MC3T3-El, and P.e-LPS may induce the expression of IL-6 in mouse osteoblast through the signaling of NF-κB.

76 FR 12096 - McCloud-Pit Project; Notice of Availability of the Final Environmental Impact Statement for the...

Science.gov (United States)

2011-03-04

... Project; Notice of Availability of the Final Environmental Impact Statement for the Mccloud-Pit... Pit Rivers in Shasta County, California and has prepared a final environmental impact statement (EIS... and the alternatives for relicensing the McCloud-Pit Project. The final EIS documents the views of...

Analysing neutron scattering data using McStas virtual experiments

DEFF Research Database (Denmark)

Udby, L.; Willendrup, Peter Kjær; Bergbäck Knudsen, Erik

2011-01-01

With the intention of developing a new data analysis method using virtual experiments we have built a detailed virtual model of the cold triple-axis spectrometer RITA-II at PSI, Switzerland, using the McStas neutron ray-tracing package. The parameters characterising the virtual instrument were...... carefully tuned against real experiments. In the present paper we show that virtual experiments reproduce experimentally observed linewidths within 1–3% for a variety of samples. Furthermore we show that the detailed knowledge of the instrumental resolution found from virtual experiments, including sample...

Official portrait of Astronaut Ronald E. McNair

Science.gov (United States)

1985-01-01

Official portrait of Astronaut Ronald E. McNair. McNair is in the blue shuttle flight suit, standing in front of a table which holds a model of the Space Shuttle. An American flag is visible behind him.

MC3T3-E1 cell response of amorphous phase/TiO{sub 2} nanocrystal composite coating prepared by microarc oxidation on titanium

Energy Technology Data Exchange (ETDEWEB)

Zhou, Rui [Department of Materials Science and Engineering, Harbin Institute of Technology, Harbin 150001 (China); Wei, Daqing, E-mail: daqingwei@hit.edu.cn [Department of Materials Science and Engineering, Harbin Institute of Technology, Harbin 150001 (China); Yang, Haoyue; Feng, Wei [Department of Materials Science and Engineering, Harbin Institute of Technology, Harbin 150001 (China); Cheng, Su [Department of Mechanical Engineering, School of Architecture and Civil Engineering, Harbin University of Science and Technology, Harbin 150001 (China); Li, Baoqiang; Wang, Yaming; Jia, Dechang; Zhou, Yu [Department of Materials Science and Engineering, Harbin Institute of Technology, Harbin 150001 (China)

2014-06-01

Bioactive amorphous phase/TiO{sub 2} nanocrystal (APTN) composite coatings were fabricated by microarc oxidation (MAO) on Ti. The APTN coatings are composed of much amorphous phase with Si, Na, Ca, Ti and O elements and a few TiO{sub 2} nanocrystals. With increasing applied voltage, the micropore density of the APTN coating decreases and the micropore size of the APTN coating increases. The results indicate that less MC3T3-E1 cells attach on the APTN coatings as compared to Ti. However, the APTN coatings greatly enhance the cell proliferation ability and the activity of alkaline phosphatase. The amorphous phase and the concentrations of the released Ca and Si from the APTN coatings during cell culture have significant effects on the cell response. - Highlights: • Amorphous phase/TiO2 nanocrystal (APTN) composite coatings were fabricated. • The MC3T3-E1 cell response of the APTN coatings was evaluated. • The APTN coatings greatly enhanced the cell proliferation ability.

Artificial ionospheric modification: The Metal Oxide Space Cloud experiment

Science.gov (United States)

Caton, Ronald G.; Pedersen, Todd R.; Groves, Keith M.; Hines, Jack; Cannon, Paul S.; Jackson-Booth, Natasha; Parris, Richard T.; Holmes, Jeffrey M.; Su, Yi-Jiun; Mishin, Evgeny V.; Roddy, Patrick A.; Viggiano, Albert A.; Shuman, Nicholas S.; Ard, Shaun G.; Bernhardt, Paul A.; Siefring, Carl L.; Retterer, John; Kudeki, Erhan; Reyes, Pablo M.

2017-05-01

Clouds of vaporized samarium (Sm) were released during sounding rocket flights from the Reagan Test Site, Kwajalein Atoll in May 2013 as part of the Metal Oxide Space Cloud (MOSC) experiment. A network of ground-based sensors observed the resulting clouds from five locations in the Republic of the Marshall Islands. Of primary interest was an examination of the extent to which a tailored radio frequency (RF) propagation environment could be generated through artificial ionospheric modification. The MOSC experiment consisted of launches near dusk on two separate evenings each releasing 6 kg of Sm vapor at altitudes near 170 km and 180 km. Localized plasma clouds were generated through a combination of photoionization and chemi-ionization (Sm + O → SmO+ + e-) processes producing signatures visible in optical sensors, incoherent scatter radar, and in high-frequency (HF) diagnostics. Here we present an overview of the experiment payloads, document the flight characteristics, and describe the experimental measurements conducted throughout the 2 week launch window. Multi-instrument analysis including incoherent scatter observations, HF soundings, RF beacon measurements, and optical data provided the opportunity for a comprehensive characterization of the physical, spectral, and plasma density composition of the artificial plasma clouds as a function of space and time. A series of companion papers submitted along with this experimental overview provide more detail on the individual elements for interested readers.

Life science experiments during parabolic flight: The McGill experience

Science.gov (United States)

Watt, D. G. D.

1988-01-01

Over the past twelve years, members of the Aerospace Medical Research Unit of McGill University have carried out a wide variety of tests and experiments in the weightless condition created by parabolic flight. This paper discusses the pros and cons of that environment for the life scientist, and uses examples from the McGill program of the types of activities which can be carried out in a transport aircraft such as the NASA KC-135.

Experience in Collaboration: McDenver at McDonald's.

Science.gov (United States)

Combs, Clarice Sue

2002-01-01

The McDenver at McDonald's project provided a nontraditional, community-based teaching and learning environment for faculty and students in a health, physical education, and recreation (HPER) department and a school of nursing. Children and parents come to McDonald's, children received developmental screenings, and parents completed conferences…

Cloud chamber experiments on the origin of ice crystal complexity in cirrus clouds

Directory of Open Access Journals (Sweden)

M. Schnaiter

2016-04-01

Full Text Available This study reports on the origin of small-scale ice crystal complexity and its influence on the angular light scattering properties of cirrus clouds. Cloud simulation experiments were conducted at the AIDA (Aerosol Interactions and Dynamics in the Atmosphere cloud chamber of the Karlsruhe Institute of Technology (KIT. A new experimental procedure was applied to grow and sublimate ice particles at defined super- and subsaturated ice conditions and for temperatures in the −40 to −60 °C range. The experiments were performed for ice clouds generated via homogeneous and heterogeneous initial nucleation. Small-scale ice crystal complexity was deduced from measurements of spatially resolved single particle light scattering patterns by the latest version of the Small Ice Detector (SID-3. It was found that a high crystal complexity dominates the microphysics of the simulated clouds and the degree of this complexity is dependent on the available water vapor during the crystal growth. Indications were found that the small-scale crystal complexity is influenced by unfrozen H2SO4 / H2O residuals in the case of homogeneous initial ice nucleation. Angular light scattering functions of the simulated ice clouds were measured by the two currently available airborne polar nephelometers: the polar nephelometer (PN probe of Laboratoire de Métérologie et Physique (LaMP and the Particle Habit Imaging and Polar Scattering (PHIPS-HALO probe of KIT. The measured scattering functions are featureless and flat in the side and backward scattering directions. It was found that these functions have a rather low sensitivity to the small-scale crystal complexity for ice clouds that were grown under typical atmospheric conditions. These results have implications for the microphysical properties of cirrus clouds and for the radiative transfer through these clouds.

Rossiter-McLaughlin observations of 55 Cnc e

DEFF Research Database (Denmark)

Lopez-Morales, Mercedes; Triaud, Amaury H. M. J.; Rodler, Florian

2014-01-01

We present Rossiter-McLaughlin observations of the transiting super-Earth 55 Cnc e collected during six transit events between 2012 January and 2013 November with HARPS and HARPS-N. We detect no radial velocity signal above 35 cm s–1 (3σ) and confine the stellar v sin i to 0.2 ± 0.5 km s–1. The s...

Self-Consistent simulations of High-Intensity Beams and E-Clouds with WARP POSINST

International Nuclear Information System (INIS)

Vay, J.-L.; Friendman, A.; Grote, D.P.

2006-01-01

We have developed a new, comprehensive set of simulation tools aimed at modeling the interaction of intense ion beams and electron clouds (e-clouds). The set contains the 3-D accelerator PIC codeWARP and the 2-D ''slice'' ecloud code POSINST, as well as a merger of the two, augmented by new modules for impact ionization and neutral gas generation. The new capability runs on workstations or parallel supercomputers and contains advanced features such as mesh refinement, disparate adaptive time stepping, and a new ''drift-Lorentz'' particle mover for tracking charged particles in magnetic fields using large time steps. It is being applied to the modeling of ion beams (1 MeV, 180 mA, K+) for heavy ion inertial fusion and warm dense matter studies, as they interact with electron clouds in the High-Current Experiment (HCX). In earlier papers, we described the capabilities and presented recent simulation results with detailed comparisons against the HCX experiment, as well as their application (in a different regime) to the modeling of e-clouds in the Large Hadron Collider (LHC). We concentrate here on the description of the implementation of the ''quasi-static'' mode of operation, for comparison with other codes, and introduce a new consideration on the estimate of computing time between the quasi-static and the fully self-consistent modes

QoE Guarantee Scheme Based on Cooperative Cognitive Cloud and Opportunistic Weight Particle Swarm

Directory of Open Access Journals (Sweden)

Weihang Shi

2015-01-01

Full Text Available It is well known that the Internet application of cloud services may be affected by the inefficiency of cloud computing and inaccurate evaluation of quality of experience (QoE seriously. In our paper, based on construction algorithms of cooperative cognitive cloud platform and optimization algorithm of opportunities weight particle swarm clustering, the QoE guarantee mechanism was proposed. The mechanism, through the sending users of requests and the cognitive neighbor users’ cooperation, combined the cooperation of subcloud platforms and constructed the optimal cloud platform with the different service. At the same time, the particle swarm optimization algorithm could be enhanced dynamically according to all kinds of opportunity request weight, which could optimize the cooperative cognitive cloud platform. Finally, the QoE guarantee scheme was proposed with the opportunity weight particle swarm optimization algorithm and collaborative cognitive cloud platform. The experimental results show that the proposed mechanism compared is superior to the QoE guarantee scheme based on cooperative cloud and QoE guarantee scheme based on particle swarm optimization, compared with optimization fitness and high cloud computing service execution efficiency and high throughput performance advantages.

FOREIGN AND DOMESTIC EXPERIENCE OF INTEGRATING CLOUD COMPUTING INTO PEDAGOGICAL PROCESS OF HIGHER EDUCATIONAL ESTABLISHMENTS

Directory of Open Access Journals (Sweden)

Nataliia A. Khmil

2016-01-01

Full Text Available In the present article foreign and domestic experience of integrating cloud computing into pedagogical process of higher educational establishments (H.E.E. has been generalized. It has been stated that nowadays a lot of educational services are hosted in the cloud, e.g. infrastructure as a service (IaaS, platform as a service (PaaS and software as a service (SaaS. The peculiarities of implementing cloud technologies by H.E.E. in Ukraine and abroad have been singled out; the products developed by the leading IT companies for using cloud computing in higher education system, such as Microsoft for Education, Google Apps for Education and Amazon AWS Educate have been reviewed. The examples of concrete types, methods and forms of learning and research work based on cloud services have been provided.

Magnetically actuated mechanical stimuli on Fe3O4/mineralized collagen coatings to enhance osteogenic differentiation of the MC3T3-E1 cells.

Science.gov (United States)

Zhuang, Junjun; Lin, Suya; Dong, Lingqing; Cheng, Kui; Weng, Wenjian

2018-04-15

Mechanical stimuli at the bone-implant interface are considered to activate the mechanotransduction pathway of the cell to improve the initial osseointegration establishment and to guarantee clinical success of the implant. However, control of the mechanical stimuli at the bone-implant interface still remains a challenge. In this study, we have designed a strategy of a magnetically responsive coating on which the mechanical stimuli is controlled because of coating deformation under static magnetic field (SMF). The iron oxide nanoparticle/mineralized collagen (IOP-MC) coatings were electrochemically codeposited on titanium substrates in different quantities of IOPs and distributions; the resulting coatings were verified to possess swelling behavior with flexibility same as that of hydrogel. The relative quantity of IOP to collagen and the IOP distribution in the coatings were demonstrated to play a critical role in mediating cell behavior. The cells present on the outer layer of the distributed IOP-MC (O-IOP-MC) coating with a mass ratio of 0.67 revealed the most distinct osteogenic differentiation activity being promoted, which could be attributed to the maximized mechanical stimuli with exposure to SMF. Furthermore, the enhanced osteogenic differentiation of the stimulated MC3T3-E1 cells originated from magnetically actuated mechanotransduction signaling pathway, embodying the upregulated expression of osteogenic-related and mechanotransduction-related genes. This work therefore provides a promising strategy for implementing mechanical stimuli to activate mechanotransduction on the bone-implant interface and thus to promote osseointegration. The magnetically actuated coating is designed to produce mechanical stimuli to cells for promoting osteogenic differentiation based on the coating deformation. Iron oxide nanoparticles (IOPs) were incorporated into the mineralized collagen coatings (MC) forming the composite coatings (IOP-MC) with spatially distributed IOPs

78 FR 17646 - Agency Information Collection Activities; Comment Request; Ronald E. McNair Postbaccalaureate...

Science.gov (United States)

2013-03-22

...; Comment Request; Ronald E. McNair Postbaccalaureate Achievement Program Annual Performance Report AGENCY... of Collection: Ronald E. McNair Postbaccalaureate Achievement Program Annual Performance Report. OMB...: Ronald E. McNair Postbaccalaureate Achievement (McNair) Program Annual Performance Report Program...

Poly(acrylic acid-regulated Synthesis of Rod-Like Calcium Carbonate Nanoparticles for Inducing the Osteogenic Differentiation of MC3T3-E1 Cells

Directory of Open Access Journals (Sweden)

Wei Yang

2016-05-01

Full Text Available Calcium carbonate, especially with nanostructure, has been considered as a good candidate material for bone regeneration due to its excellent biodegradability and osteoconductivity. In this study, rod-like calcium carbonate nanoparticles (Rod-CC NPs with desired water dispersibility were achieved with the regulation of poly (acrylic acid. Characterization results revealed that the Rod-CC NPs had an average length of 240 nm, a width of 90 nm with an average aspect ratio of 2.60 and a negative ζ-potential of −22.25 ± 0.35 mV. The degradation study illustrated the nanoparticles degraded 23% at pH 7.4 and 45% at pH 5.6 in phosphate-buffered saline (PBS solution within three months. When cultured with MC3T3-E1 cells, the Rod-CC NPs exhibited a positive effect on the proliferation of osteoblast cells. Alkaline phosphatase (ALP activity assays together with the osteocalcin (OCN and bone sialoprotein (BSP expression observations demonstrated the nanoparticles could induce the differentiation of MC3T3-E1 cells. Our study developed well-dispersed rod-like calcium carbonate nanoparticles which have great potential to be used in bone regeneration.

Adiponectin and AMP kinase activator stimulate proliferation, differentiation, and mineralization of osteoblastic MC3T3-E1 cells

Directory of Open Access Journals (Sweden)

Yamauchi Mika

2007-11-01

Full Text Available Abstract Background Adiponectin is a key mediator of the metabolic syndrome that is caused by visceral fat accumulation. Adiponectin and its receptors are known to be expressed in osteoblasts, but their actions with regard to bone metabolism are still unclear. In this study, we investigated the effects of adiponectin on the proliferation, differentiation, and mineralization of osteoblastic MC3T3-E1 cells. Results Adiponectin receptor type 1 (AdipoR1 mRNA was detected in the cells by RT-PCR. The adenosine monophosphate-activated protein kinase (AMP kinase was phosphorylated by both adiponectin and a pharmacological AMP kinase activator, 5-amino-imidazole-4-carboxamide-riboside (AICAR, in the cells. AdipoR1 small interfering RNA (siRNA transfection potently knocked down the receptor mRNA, and the effect of this knockdown persisted for as long as 10 days after the transfection. The transfected cells showed decreased expressions of type I collagen and osteocalcin mRNA, as determined by real-time PCR, and reduced ALP activity and mineralization, as determined by von Kossa and Alizarin red stainings. In contrast, AMP kinase activation by AICAR (0.01–0.5 mM in wild-type MC3T3-E1 cells augmented their proliferation, differentiation, and mineralization. BrdU assay showed that the addition of adiponectin (0.01–1.0 μg/ml also promoted their proliferation. Osterix, but not Runx-2, appeared to be involved in these processes because AdipoR1 siRNA transfection and AICAR treatments suppressed and enhanced osterix mRNA expression, respectively. Conclusion Taken together, this study suggests that adiponectin stimulates the proliferation, differentiation, and mineralization of osteoblasts via the AdipoR1 and AMP kinase signaling pathways in autocrine and/or paracrine fashions.

When STAR meets the Clouds-Virtualization and Cloud Computing Experiences

International Nuclear Information System (INIS)

Lauret, J; Hajdu, L; Walker, M; Balewski, J; Goasguen, S; Stout, L; Fenn, M; Keahey, K

2011-01-01

In recent years, Cloud computing has become a very attractive paradigm and popular model for accessing distributed resources. The Cloud has emerged as the next big trend. The burst of platform and projects providing Cloud resources and interfaces at the very same time that Grid projects are entering a production phase in their life cycle has however raised the question of the best approach to handling distributed resources. Especially, are Cloud resources scaling at the levels shown by Grids? Are they performing at the same level? What is their overhead on the IT teams and infrastructure? Rather than seeing the two as orthogonal, the STAR experiment has viewed them as complimentary and has studied merging the best of the two worlds with Grid middleware providing the aggregation of both Cloud and traditional resources. Since its first use of Cloud resources on Amazon EC2 in 2008/2009 using a Nimbus/EC2 interface, the STAR software team has tested and experimented with many novel approaches: from a traditional, native EC2 approach to the Virtual Organization Cluster (VOC) at Clemson University and Condor/VM on the GLOW resources at the University of Wisconsin. The STAR team is also planning to run as part of the DOE/Magellan project. In this paper, we will present an overview of our findings from using truly opportunistic resources and scaling-out two orders of magnitude in both tests and practical usage.

Results from the CERN pilot CLOUD experiment

International Nuclear Information System (INIS)

Duplissy, J.; David, A.; Hahn, F.; Kirkby, J.; Onnela, A.; Veenhof, R.; Wilhelmsson, M.; Enghoff, M.B.; Avngaard, M.; Bondo, T.; Marsh, N.D.; Pedersen, O.P.; Polny, J.; Svensmark, H.; Svensmark, J.; Aplin, K.L.; Bingham, R.; Kellett, B.; Lockwood, M.; Arnold, F.; Aufmhoff, H.; Reichl, U.; Verheggen, B.; Baltensperger, U.; Wehrle, G.; Weingartner, E.; Carslaw, K.; Curtius, J.; Fastrup, B.; Pedersen, E.; Gagne, S.; Kulmala, M.; Laakso, L.; Nieminen, T.; Sipila, M.; Harrison, R.G.; Laaksonen, A.; Lillestol, E.; Makela, J.; Makhmutov, V.; Stozhkov, Y.; Seinfeld, J.H.; Stratmann, F.; Wex, H.; Viisanen, Y.; Wagner, P.E.; Winkler, P.M.

2010-01-01

During a 4-week run in October-November 2006, a pilot experiment was performed at the CERN Proton Synchrotron in preparation for the Cosmics Leaving Outdoor Droplets (CLOUD) experiment, whose aim is to study the possible influence of cosmic rays on clouds. The purpose of the pilot experiment was firstly to carry out exploratory measurements of the effect of ionising particle radiation on aerosol formation from trace H2SO4 vapour and secondly to provide technical input for the CLOUD design. A total of 44 nucleation bursts were produced and recorded, with formation rates of particles above the 3 nm detection threshold of between 0.1 and 100 cm -3 s -1 , and growth rates between 2 and 37 nm h -1 . The corresponding H2SO4 concentrations were typically around 106 cm -3 or less. The experimentally-measured formation rates and H2SO4 concentrations are comparable to those found in the atmosphere, supporting the idea that sulphuric acid is involved in the nucleation of atmospheric aerosols. However, sulphuric acid alone is not able to explain the observed rapid growth rates, which suggests the presence of additional trace vapours in the aerosol chamber, whose identity is unknown. By analyzing the charged fraction, a few of the aerosol bursts appear to have a contribution from ion-induced nucleation and ion-ion recombination to form neutral clusters. Some indications were also found for the accelerator beam timing and intensity to influence the aerosol particle formation rate at the highest experimental SO2 concentrations of 6 ppb, although none was found at lower concentrations. Overall, the exploratory measurements provide suggestive evidence for ion-induced nucleation or ion-ion recombination as sources of aerosol particles. However in order to quantify the conditions under which ion processes become significant, improvements are needed in controlling the experimental variables and in the reproducibility of the experiments. Finally, concerning technical aspects, the most

PRELP (proline/arginine-rich end leucine-rich repeat protein) promotes osteoblastic differentiation of preosteoblastic MC3T3-E1 cells by regulating the β-catenin pathway

Energy Technology Data Exchange (ETDEWEB)

Li, Haiying; Cui, Yazhou; Luan, Jing [School of Medicine and Life Sciences, University of Jinan-Shandong Academy of Medical Science, Ji' nan, Shandong (China); Key Laboratory for Rare Disease Research of Shandong Province, Key Laboratory for Biotech Drugs of the Ministry of Health, Shandong Medical Biotechnological Center, Shandong Academy of Medical Sciences, Ji' nan, Shandong (China); Zhang, Xiumei [School of Medicine and Life Sciences, University of Jinan-Shandong Academy of Medical Science, Ji' nan, Shandong (China); Li, Chengzhi; Zhou, Xiaoyan; Shi, Liang [School of Medicine and Life Sciences, University of Jinan-Shandong Academy of Medical Science, Ji' nan, Shandong (China); Key Laboratory for Rare Disease Research of Shandong Province, Key Laboratory for Biotech Drugs of the Ministry of Health, Shandong Medical Biotechnological Center, Shandong Academy of Medical Sciences, Ji' nan, Shandong (China); Wang, Huaxin [Shandong University of Traditional Chinese Medicine, Ji' an, Shandong (China); Han, Jinxiang, E-mail: jxhan9888@aliyun.com [School of Medicine and Life Sciences, University of Jinan-Shandong Academy of Medical Science, Ji' nan, Shandong (China); Key Laboratory for Rare Disease Research of Shandong Province, Key Laboratory for Biotech Drugs of the Ministry of Health, Shandong Medical Biotechnological Center, Shandong Academy of Medical Sciences, Ji' nan, Shandong (China)

2016-02-12

Proline/arginine-rich end leucine-rich repeat protein (PRELP) is a collagen-binding proteoglycan highly expressed in the developing bones. Recent studies indicated that PRELP could inhibit osteoclastogenesis as a NF-κB inhibitor. However, its role during osteoblast differentiation is still unclear. In this study, we confirmed that the expression of PRELP increased with the osteogenesis induction of preosteoblastic MC3T3-E1 cells. Down-regulation of PRELP expression by shRNA reduced ALP activity, mineralization and expression of osteogenic marker gene Runx2. Our microarray analysis data suggested that β-catenin may act as a hub gene in the PRELP-mediated gene network. We validated furtherly that PRELP knockdown could inhibit the level of connexin43, a key regulator of osteoblast differentiation by affecting β-catenin protein expression, and its nuclear translocation in MC3T3-E1 preosteoblasts. Therefore, this study established a new role of PRELP in modulating β-catenin/connexin43 pathway and osteoblast differentiation.

Open Cloud eXchange (OCX): A Pivot for Intercloud Services Federation in Multi-provider Cloud Market Environment

NARCIS (Netherlands)

Demchenko, Y.; Dumitru, C.; Koining, R.; de Laat, C.; Matselyukh, T.; Filiposka, S.; de Vos, M.; Arbel, D.; Regvart, D.; Karaliotas, T.; Baumann, K.

2015-01-01

This paper presents results of the ongoing development of the Open Cloud eXchange (OCX) that has been proposed in the framework of the GN3plus project. Its aim is to provide cloud aware network infrastructure to power and support modern data intensive research at European universities and research

Cloud Computing Benefits for E-learning Solutions

OpenAIRE

Paul POCATILU

2010-01-01

E-learning systems usually require many hardware and software resources. There are many educational institutions that cannot afford such investments, and cloud computing is the best solution. This paper presents the impact on using cloud computing for e-learning solutions.

Cloud Infrastructure & Applications - CloudIA

Science.gov (United States)

Sulistio, Anthony; Reich, Christoph; Doelitzscher, Frank

The idea behind Cloud Computing is to deliver Infrastructure-as-a-Services and Software-as-a-Service over the Internet on an easy pay-per-use business model. To harness the potentials of Cloud Computing for e-Learning and research purposes, and to small- and medium-sized enterprises, the Hochschule Furtwangen University establishes a new project, called Cloud Infrastructure & Applications (CloudIA). The CloudIA project is a market-oriented cloud infrastructure that leverages different virtualization technologies, by supporting Service-Level Agreements for various service offerings. This paper describes the CloudIA project in details and mentions our early experiences in building a private cloud using an existing infrastructure.

Effect of injection molded micro-structured polystyrene surfaces on proliferation of MC3T3-E1 cells

Directory of Open Access Journals (Sweden)

G. Lucchetta

2015-04-01

Full Text Available In this work, osteoinductive micro-pillared polystyrene surfaces were mass-produced for bone replacement applications, by means of the micro injection molding process. Firstly, the molding process parameters were optimized with a two-level, three-factor central composite face-centered plan to increase the quality of polystyrene micro pillars replication and to maximize the pillars height uniformity over the molded part. Secondly, osteoblastic MC3T3-E1 cells adhesion and proliferation on the replicated substrates were assessed as a function of micro topography parameters, such as pillars diameter, aspect ratio and spacing. Cell morphology and proliferation were evaluated through MTS test after 1, 3 and 7 days from seeding. The experimental results showed that cells adhesion and proliferation is more positively promoted on micro-pillared surfaces compared to flat surfaces, but no correlations were observed between cell proliferation and pillar diameter and spacing.

Oscillatory fluid flow elicits changes in morphology, cytoskeleton and integrin-associated molecules in MLO-Y4 cells, but not in MC3T3-E1 cells

Directory of Open Access Journals (Sweden)

Huiyun Xu

2012-01-01

Full Text Available Interstitial fluid flow stress is one of the most important mechanical stimulations of bone cells under physiological conditions. Osteocytes and osteoblasts act as primary mechanosensors within bones, and in vitro are able to respond to fluid shear stress, both morphologically and functionally. However, there is little information about the response of integrin-associated molecules using both osteoblasts and osteocytes. In this study, we investigated the changes in response to 2 hours of oscillatory fluid flow stress in the MLO-Y4 osteocyte-like cell line and the MC3T3-E1 osteoblast-like cell line. MLO-Y4 cells exhibited a significant increase in the expression of integrin-associated molecules, including OPN, CD44, vinculin and integrin avp3. However, there was no or limited increase observed in MC3T3-E1 osteoblast-like cells. Cell area and fiber stress formation were also markedly promoted by fluid flow only in MLO-Y4 cells. But the numbers of processes per cell remain unaffected in both cell lines.

Investigation concerning the existence of quarks near the nuclei of great air showers with the help of a cloud chamber

International Nuclear Information System (INIS)

Wiemken, U.

1974-01-01

In order to compare the results of McCusker's (1969) experiment, this paper presents an experiment with improved technical details. For this purpose, a large cloud chamber in connection with the Kiel air shower set-up was available. First, the expected quark induced ionisation has been determined by a calibration measurement on minimum ionising muons. These data are in extremely good agreement with values from the literature. Then, measurements in air showers with a mean primary energy of 10 16 eV have been performed during an effective measuring time of 66 days. The mean distance from the nucleus amounts to about 9 m. In contradiction to the quark abundance of McCusker, which predicts six quarks for the Kiel set-up, no track was found with 'quark suspicion'. Some tracks with low droplet densities could be explained already in a preliminary stage of the evaluation by normal cloud chamber effects. (orig.) [de

Effects of irradiation on TGF-β1 mRNA expression and calcific nodule formation in MC3T3-E1 osteoblastic cell line

International Nuclear Information System (INIS)

Song, Ju Seop; Kim, Kyoung A; Koh, Kwang Joon

2008-01-01

To investigate the effects of irradiation on transforming growth factor β1 (TGF-β 1 ) mRNA expression and calcific nodule formation in MC3T3-E1 osteoblastic cell line. Cells were cultured in alpha-minimum essential medium (α-MEM) supplemented with 10% fetal bovine serum and antibiotics. When the cells reached the level of 70-80% confluence, culture media were changed with α-MEM supplemented with 10% FBS, 5 mM β-glycerol phosphate, and 50 μg/mL ascorbic acid. Thereafter the cells were irradiated with a single dose of 2, 4, 6, 8 Gy at a dose rate of 1.5 Gy/min. The expression pattern of TGF-β 1 mRNA, calcium content and calcific nodule formation were examined on day 3, 7, 14, 21, 28, respectively, after the irradiation. The amount of TGF-β 1 mRNA expression decreased significantly on day 7 after irradiation of 4, 6, 8 Gy. It also decreased on day 14 after irradiation of 6, 8 Gy, and decreased on day 21 after irradiation of 8 Gy. The amount of calcium deposition decreased significantly on day 7 after irradiation of 4, 8 Gy (P 1 mRNA expression that was associated with proliferation and the production of extracellular matrix in MC3T3-E1 osteoblastic cell line

An efficient global energy optimization approach for robust 3D plane segmentation of point clouds

Science.gov (United States)

Dong, Zhen; Yang, Bisheng; Hu, Pingbo; Scherer, Sebastian

2018-03-01

Automatic 3D plane segmentation is necessary for many applications including point cloud registration, building information model (BIM) reconstruction, simultaneous localization and mapping (SLAM), and point cloud compression. However, most of the existing 3D plane segmentation methods still suffer from low precision and recall, and inaccurate and incomplete boundaries, especially for low-quality point clouds collected by RGB-D sensors. To overcome these challenges, this paper formulates the plane segmentation problem as a global energy optimization because it is robust to high levels of noise and clutter. First, the proposed method divides the raw point cloud into multiscale supervoxels, and considers planar supervoxels and individual points corresponding to nonplanar supervoxels as basic units. Then, an efficient hybrid region growing algorithm is utilized to generate initial plane set by incrementally merging adjacent basic units with similar features. Next, the initial plane set is further enriched and refined in a mutually reinforcing manner under the framework of global energy optimization. Finally, the performances of the proposed method are evaluated with respect to six metrics (i.e., plane precision, plane recall, under-segmentation rate, over-segmentation rate, boundary precision, and boundary recall) on two benchmark datasets. Comprehensive experiments demonstrate that the proposed method obtained good performances both in high-quality TLS point clouds (i.e., http://SEMANTIC3D.NET)

Enhancement of growth and osteogenic differentiation of MC3T3-E1 cells via facile surface functionalization of polylactide membrane with chitooligosaccharide based on polydopamine adhesive coating

International Nuclear Information System (INIS)

Li, Huihua; Luo, Chuang; Luo, Binghong; Wen, Wei; Wang, Xiaoying; Ding, Shan; Zhou, Changren

2016-01-01

Graphical abstract: - Highlights: • COS was conveniently immobilized on PDLLA membrane based on PDOPA adhesive layer. • The hydrophilicity of PDLLA membrane was improved by modified with PDOPA and COS. • COS-functionalized PDLLA membrane is favorable to cell adhesion and proliferation. • COS-coated PDLLA membrane notably promote osteogenic differentiation of MC3T3-E1. - Abstract: To develop a chitooligosaccharide(COS)-functionalized poly(D,L-lactide) (PDLLA) membrane to enhance growth and osteogenic differentiation of MC3T3-E1 cells, firstly a thin polydopamine (PDOPA) layer was adhered to the PDLLA membrane via the self-polymerization and strong adhesion behavior of dopamine. Subsequently, COS was immobilized covalently on the resultant PDLLA/PDOPA composite membrane by coupling with PDOPA active coating. The successful immobilization of the PDOPA and COS was confirmed by attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy and X-ray photoelectron spectroscopy (XPS). Scanning electronic microscopy (SEM) and atomic force microscopy (AFM) results indicated that the surface topography and roughness of the membranes were changed, and the root mean square increased from 0.613 nm to 6.96 and 7.12 nm, respectively after coating PDOPA and COS. Water contact angle and surface energy measurements revealed that the membrane hydrophilicity was remarkably improved by surface modification. In vitro cells culture results revealed that the PDOPA- and COS-functionalized surfaces showed a significant increase in MC3T3-E1 cells adhesion, proliferation, osteogenic differentiation and alkaline phosphate activity compared to the pristine PDLLA substrate. Furthermore the COS-functionalized PDLLA membrane was more effectively at enhancing osteoblast activity than the PDOPA-functionalized PDLLA membrane.

Ghrelin protects against depleted uranium-induced apoptosis of MC3T3-E1 cells through oxidative stress-mediated p38-mitogen-activated protein kinase pathway

Energy Technology Data Exchange (ETDEWEB)

Hao, Yuhui; Liu, Cong; Huang, Jiawei; Gu, Ying; Li, Hong; Yang, Zhangyou; Liu, Jing [State Key Laboratory of Trauma, Burns and Combined Injury, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Third Military Medical University, No. 30 Gaotanyan Street, Shapingba District, Chongqing 400038 (China); Wang, Weidong, E-mail: wwdwyl@sina.com [Department of Radiation Oncology, Shanghai Jiao Tong University Affiliated Sixth People Hospital, Shanghai 200233 (China); Li, Rong, E-mail: yuhui_hao@126.com [State Key Laboratory of Trauma, Burns and Combined Injury, Institute of Combined Injury, Chongqing Engineering Research Center for Nanomedicine, College of Preventive Medicine, Third Military Medical University, No. 30 Gaotanyan Street, Shapingba District, Chongqing 400038 (China)

2016-01-01

Depleted uranium (DU) mainly accumulates in the bone over the long term. Osteoblast cells are responsible for the formation of bone, and they are sensitive to DU damage. However, studies investigating methods of reducing DU damage in osteoblasts are rarely reported. Ghrelin is a stomach hormone that stimulates growth hormones released from the hypothalamic–pituitary axis, and it is believed to play an important physiological role in bone metabolism. This study evaluates the impact of ghrelin on DU-induced apoptosis of the osteoblast MC3T3-E1 and investigates its underlying mechanisms. The results show that ghrelin relieved the intracellular oxidative stress induced by DU, eliminated reactive oxygen species (ROS) and reduced lipid peroxidation by increasing intracellular GSH levels; in addition, ghrelin effectively suppressed apoptosis, enhanced mitochondrial membrane potential, and inhibited cytochrome c release and caspase-3 activation after DU exposure. Moreover, ghrelin significantly reduced the expression of DU-induced phosphorylated p38-mitogen-activated protein kinase (MAPK). A specific inhibitor (SB203580) or specific siRNA of p38-MAPK could significantly suppress DU-induced apoptosis and related signals, whereas ROS production was not affected. In addition, ghrelin receptor inhibition could reduce the anti-apoptosis effect of ghrelin on DU and reverse the effect of ghrelin on intracellular ROS and p38-MAPK after DU exposure. These results suggest that ghrelin can suppress DU-induced apoptosis of MC3T3-E1 cells, reduce DU-induced oxidative stress by interacting with its receptor, and inhibit downstream p38-MAPK activation, thereby suppressing the mitochondrial-dependent apoptosis pathway. - Highlights: • Ghrelin suppressed DU-induced apoptosis of MC3T3-E1 cells. • Ghrelin inhibited DU-induced oxidative stress and further p38-MAPK activation. • Ghrelin further suppressed mitochondrial-dependent apoptosis pathway. • The anti-oxidation effect of

Completing Einstein's Proof of E=mc2

Directory of Open Access Journals (Sweden)

Lo C. Y.

2006-10-01

Full Text Available It is shown that Einstein’s proof for E=mc2 is actually incomplete and therefore is not yet valid. A crucial step is his implicit assumption of treating the light as a bundle of massless particles. However, the energy-stress tensor of massless particles is incompatible with an electromagnetic energy-stress tensor. Thus, it is necessary to show that the total energy of a light ray includes also non-electromagnetic energy. It turns out, the existence of intrinsic difference between the photonic and the electromagnetic energy tensors is independent of the coupling of gravity. Nevertheless, their difference is the energy-stress tensor of the gravitational wave component that is accompanying the electromagnetic wave component. Concurrently, it is concluded that Einstein’s formula E=mc2 necessarily implies that the photons include non- electromagnetic energy and that the Einstein equation of 1915 must be rectified.

Cloud-Resolving Modeling Intercomparison Study of a Squall Line Case from MC3E - Properties of Convective Core

Science.gov (United States)

Fan, J.; Han, B.; Varble, A.; Morrison, H.; North, K.; Kollias, P.; Chen, B.; Dong, X.; Giangrande, S. E.; Khain, A.; Lin, Y.; Mansell, E.; Milbrandt, J.; Stenz, R.; Thompson, G.; Wang, Y.

2016-12-01

The large spread in CRM model simulations of deep convection and aerosol effects on deep convective clouds (DCCs) makes it difficult to (1) further our understanding of deep convection and (2) define "benchmarks" and then limit their use in parameterization developments. A constrained model intercomparsion study on a mid-latitude mesoscale squall line is performed using the Weather Research & Forecasting (WRF) model at 1-km horizontal grid spacing with eight cloud microphysics schemes to understand specific processes that lead to the large spreads of simulated convection and precipitation. Various observational data are employed to evaluate the baseline simulations. All simulations tend to produce a wider convective area but a much narrower stratiform area. The magnitudes of virtual potential temperature drop, pressure rise, and wind speed peak associated with the passage of the gust front are significantly smaller compared with the observations, suggesting simulated cool pools are weaker. Simulations generally overestimate the vertical velocity and radar reflectivity in convective cores compared with the retrievals. The modeled updraft velocity and precipitation have a significant spread across eight schemes. The spread of updraft velocity is the combination of both low-level pressure perturbation gradient (PPG) and buoyancy. Both PPG and thermal buoyancy are small for simulations of weak convection but both are large for those of strong convection. Ice-related parameterizations contribute majorly to the spread of updraft velocity, while they are not the reason for the large spread of precipitation. The understandings gained in this study can help to focus future observations and parameterization development.

Fault Tolerance and Scaling in e-Science Cloud Applications: Observations from the Continuing Development of MODISAzure

Energy Technology Data Exchange (ETDEWEB)

Li, Jie [Univ. of Virginia, Charlottesville, VA (United States). Dept. of Computer Science; Humphrey, Marty [Univ. of Virginia, Charlottesville, VA (United States). Dept. of Computer Science; Cheah, You-Wei [Indiana Univ., Bloomington, IN (United States); Ryu, Youngryel [Univ. of California, Berkeley, CA (United States). Dept. of Environmental Science, Policy, and Management; Agarwal, Deb [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Jackson, Keith [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); van Ingen, Catharine [Microsoft Research. San Francisco, CA (United States)

2010-04-01

It can be natural to believe that many of the traditional issues of scale have been eliminated or at least greatly reduced via cloud computing. That is, if one can create a seemingly wellfunctioning cloud application that operates correctly on small or moderate-sized problems, then the very nature of cloud programming abstractions means that the same application will run as well on potentially significantly larger problems. In this paper, we present our experiences taking MODISAzure, our satellite data processing system built on the Windows Azure cloud computing platform, from the proof-of-concept stage to a point of being able to run on significantly larger problem sizes (e.g., from national-scale data sizes to global-scale data sizes). To our knowledge, this is the longest-running eScience application on the nascent Windows Azure platform. We found that while many infrastructure-level issues were thankfully masked from us by the cloud infrastructure, it was valuable to design additional redundancy and fault-tolerance capabilities such as transparent idempotent task retry and logging to support debugging of user code encountering unanticipated data issues. Further, we found that using a commercial cloud means anticipating inconsistent performance and black-box behavior of virtualized compute instances, as well as leveraging changing platform capabilities over time. We believe that the experiences presented in this paper can help future eScience cloud application developers on Windows Azure and other commercial cloud providers.

An Automatic Cloud Detection Method for ZY-3 Satellite

Directory of Open Access Journals (Sweden)

CHEN Zhenwei

2015-03-01

Full Text Available Automatic cloud detection for optical satellite remote sensing images is a significant step in the production system of satellite products. For the browse images cataloged by ZY-3 satellite, the tree discriminate structure is adopted to carry out cloud detection. The image was divided into sub-images and their features were extracted to perform classification between clouds and grounds. However, due to the high complexity of clouds and surfaces and the low resolution of browse images, the traditional classification algorithms based on image features are of great limitations. In view of the problem, a prior enhancement processing to original sub-images before classification was put forward in this paper to widen the texture difference between clouds and surfaces. Afterwards, with the secondary moment and first difference of the images, the feature vectors were extended in multi-scale space, and then the cloud proportion in the image was estimated through comprehensive analysis. The presented cloud detection algorithm has already been applied to the ZY-3 application system project, and the practical experiment results indicate that this algorithm is capable of promoting the accuracy of cloud detection significantly.

A Robust Multi-Scale Modeling System for the Study of Cloud and Precipitation Processes

Science.gov (United States)

Tao, Wei-Kuo

2012-01-01

During the past decade, numerical weather and global non-hydrostatic models have started using more complex microphysical schemes originally developed for high resolution cloud resolving models (CRMs) with 1-2 km or less horizontal resolutions. These microphysical schemes affect the dynamic through the release of latent heat (buoyancy loading and pressure gradient) the radiation through the cloud coverage (vertical distribution of cloud species), and surface processes through rainfall (both amount and intensity). Recently, several major improvements of ice microphysical processes (or schemes) have been developed for cloud-resolving model (Goddard Cumulus Ensemble, GCE, model) and regional scale (Weather Research and Forecast, WRF) model. These improvements include an improved 3-ICE (cloud ice, snow and graupel) scheme (Lang et al. 2010); a 4-ICE (cloud ice, snow, graupel and hail) scheme and a spectral bin microphysics scheme and two different two-moment microphysics schemes. The performance of these schemes has been evaluated by using observational data from TRMM and other major field campaigns. In this talk, we will present the high-resolution (1 km) GeE and WRF model simulations and compared the simulated model results with observation from recent field campaigns [i.e., midlatitude continental spring season (MC3E; 2010), high latitude cold-season (C3VP, 2007; GCPEx, 2012), and tropical oceanic (TWP-ICE, 2006)].

Intercomparison study and optical asphericity measurements of small ice particles in the CERN CLOUD experiment

Science.gov (United States)

Nichman, Leonid; Järvinen, Emma; Dorsey, James; Connolly, Paul; Duplissy, Jonathan; Fuchs, Claudia; Ignatius, Karoliina; Sengupta, Kamalika; Stratmann, Frank; Möhler, Ottmar; Schnaiter, Martin; Gallagher, Martin

2017-09-01

Optical probes are frequently used for the detection of microphysical cloud particle properties such as liquid and ice phase, size and morphology. These properties can eventually influence the angular light scattering properties of cirrus clouds as well as the growth and accretion mechanisms of single cloud particles. In this study we compare four commonly used optical probes to examine their response to small cloud particles of different phase and asphericity. Cloud simulation experiments were conducted at the Cosmics Leaving OUtdoor Droplets (CLOUD) chamber at European Organisation for Nuclear Research (CERN). The chamber was operated in a series of multi-step adiabatic expansions to produce growth and sublimation of ice particles at super- and subsaturated ice conditions and for initial temperatures of -30, -40 and -50 °C. The experiments were performed for ice cloud formation via homogeneous ice nucleation. We report the optical observations of small ice particles in deep convection and in situ cirrus simulations. Ice crystal asphericity deduced from measurements of spatially resolved single particle light scattering patterns by the Particle Phase Discriminator mark 2 (PPD-2K, Karlsruhe edition) were compared with Cloud and Aerosol Spectrometer with Polarisation (CASPOL) measurements and image roundness captured by the 3View Cloud Particle Imager (3V-CPI). Averaged path light scattering properties of the simulated ice clouds were measured using the Scattering Intensity Measurements for the Optical detectioN of icE (SIMONE) and single particle scattering properties were measured by the CASPOL. We show the ambiguity of several optical measurements in ice fraction determination of homogeneously frozen ice in the case where sublimating quasi-spherical ice particles are present. Moreover, most of the instruments have difficulties of producing reliable ice fraction if small aspherical ice particles are present, and all of the instruments cannot separate perfectly

Assessing 1D Atmospheric Solar Radiative Transfer Models: Interpretation and Handling of Unresolved Clouds.

Science.gov (United States)

Barker, H. W.; Stephens, G. L.; Partain, P. T.; Bergman, J. W.; Bonnel, B.; Campana, K.; Clothiaux, E. E.; Clough, S.; Cusack, S.; Delamere, J.; Edwards, J.; Evans, K. F.; Fouquart, Y.; Freidenreich, S.; Galin, V.; Hou, Y.; Kato, S.; Li, J.;  Mlawer, E.;  Morcrette, J.-J.;  O'Hirok, W.;  Räisänen, P.;  Ramaswamy, V.;  Ritter, B.;  Rozanov, E.;  Schlesinger, M.;  Shibata, K.;  Sporyshev, P.;  Sun, Z.;  Wendisch, M.;  Wood, N.;  Yang, F.

2003-08-01

The primary purpose of this study is to assess the performance of 1D solar radiative transfer codes that are used currently both for research and in weather and climate models. Emphasis is on interpretation and handling of unresolved clouds. Answers are sought to the following questions: (i) How well do 1D solar codes interpret and handle columns of information pertaining to partly cloudy atmospheres? (ii) Regardless of the adequacy of their assumptions about unresolved clouds, do 1D solar codes perform as intended?One clear-sky and two plane-parallel, homogeneous (PPH) overcast cloud cases serve to elucidate 1D model differences due to varying treatments of gaseous transmittances, cloud optical properties, and basic radiative transfer. The remaining four cases involve 3D distributions of cloud water and water vapor as simulated by cloud-resolving models. Results for 25 1D codes, which included two line-by-line (LBL) models (clear and overcast only) and four 3D Monte Carlo (MC) photon transport algorithms, were submitted by 22 groups. Benchmark, domain-averaged irradiance profiles were computed by the MC codes. For the clear and overcast cases, all MC estimates of top-of-atmosphere albedo, atmospheric absorptance, and surface absorptance agree with one of the LBL codes to within ±2%. Most 1D codes underestimate atmospheric absorptance by typically 15-25 W m-2 at overhead sun for the standard tropical atmosphere regardless of clouds.Depending on assumptions about unresolved clouds, the 1D codes were partitioned into four genres: (i) horizontal variability, (ii) exact overlap of PPH clouds, (iii) maximum/random overlap of PPH clouds, and (iv) random overlap of PPH clouds. A single MC code was used to establish conditional benchmarks applicable to each genre, and all MC codes were used to establish the full 3D benchmarks. There is a tendency for 1D codes to cluster near their respective conditional benchmarks, though intragenre variances typically exceed those for

MC3T3-E1 cell response to stainless steel 316L with different surface treatments

International Nuclear Information System (INIS)

Zhang, Hongyu; Han, Jianmin; Sun, Yulong; Huang, Yongling; Zhou, Ming

2015-01-01

In the present study, stainless steel 316L samples with polishing, aluminum oxide blasting, and hydroxyapatite (HA) coating were prepared and characterized through a scanning electron microscope (SEM), optical interferometer (surface roughness, Sq), contact angle, surface composition and phase composition analyses. Osteoblast-like MC3T3-E1 cell adhesion on the samples was investigated by cell morphology using a SEM (4 h, 1 d, 3 d, 7 d), and cell proliferation was assessed by MTT method at 1 d, 3 d, and 7 d. In addition, adsorption of bovine serum albumin on the samples was evaluated at 1 h. The polished sample was smooth (Sq: 1.8 nm), and the blasted and HA coated samples were much rougher (Sq: 3.2 μm and 7.8 μm). Within 1 d of incubation, the HA coated samples showed the best cell morphology (e.g., flattened shape and complete spread), but there was no significant difference after 3 d and 7 d of incubation for all the samples. The absorbance value for the HA coated samples was the highest after 1 d and 3 d of incubation, indicating better cell viability. However, it reduced to the lowest value at 7 d. Protein adsorption on the HA coated samples was the highest at 1 h. The results indicate that rough stainless steel surface improves cell adhesion and morphology, and HA coating contributes to superior cell adhesion, but inhibits cell proliferation. - Highlights: • Rough stainless steel surface improves cell adhesion and proliferation. • HA coating results in superior cell morphology and cell attachment. • HA coating inhibits osteoblast cell proliferation after 7 d of incubation

MC3T3-E1 cell response to stainless steel 316L with different surface treatments

Energy Technology Data Exchange (ETDEWEB)

Zhang, Hongyu [State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084 (China); Han, Jianmin, E-mail: siyanghan@163.com [Dental Materials Laboratory, National Engineering Laboratory for Digital and Material Technology of Stomatology, Peking University School and Hospital of Stomatology, Beijing 100081 (China); Sun, Yulong [State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084 (China); Huang, Yongling [Jinghang Biomedicine Engineering Division, Beijing Institute of Aeronautical Material, Beijing 100095 (China); Zhou, Ming [State Key Laboratory of Tribology, Department of Mechanical Engineering, Tsinghua University, Beijing 100084 (China)

2015-11-01

In the present study, stainless steel 316L samples with polishing, aluminum oxide blasting, and hydroxyapatite (HA) coating were prepared and characterized through a scanning electron microscope (SEM), optical interferometer (surface roughness, Sq), contact angle, surface composition and phase composition analyses. Osteoblast-like MC3T3-E1 cell adhesion on the samples was investigated by cell morphology using a SEM (4 h, 1 d, 3 d, 7 d), and cell proliferation was assessed by MTT method at 1 d, 3 d, and 7 d. In addition, adsorption of bovine serum albumin on the samples was evaluated at 1 h. The polished sample was smooth (Sq: 1.8 nm), and the blasted and HA coated samples were much rougher (Sq: 3.2 μm and 7.8 μm). Within 1 d of incubation, the HA coated samples showed the best cell morphology (e.g., flattened shape and complete spread), but there was no significant difference after 3 d and 7 d of incubation for all the samples. The absorbance value for the HA coated samples was the highest after 1 d and 3 d of incubation, indicating better cell viability. However, it reduced to the lowest value at 7 d. Protein adsorption on the HA coated samples was the highest at 1 h. The results indicate that rough stainless steel surface improves cell adhesion and morphology, and HA coating contributes to superior cell adhesion, but inhibits cell proliferation. - Highlights: • Rough stainless steel surface improves cell adhesion and proliferation. • HA coating results in superior cell morphology and cell attachment. • HA coating inhibits osteoblast cell proliferation after 7 d of incubation.

Influence of MC3T3-E1 preosteoblast culture on the corrosion of a T6-treated AZ91 alloy

Science.gov (United States)

Brooks, Emily K.; Tobias, Menachem E.; Yang, Shuying; Bone, Lawrence B.; Ehrensberger, Mark T.

2015-01-01

This study investigated the corrosion of artificially aged T6 heat-treated Mg-9%Al-1%Zn (AZ91) for biomedical applications. Corrosion tests and surface analysis were completed both with and without a monolayer of mouse preosteoblast MC3T3-E1 cells cultured on the sample. Electrochemical impedance spectroscopy (EIS) and inductively coupled plasma mass spectroscopy (ICPMS) were used to explore the corrosion processes after either 3 or 21 days of AZ91 incubation in cell culture medium (CCM). The EIS showed both the inner layer resistance (Rin) and outer layer resistance (Rout) were lower for samples without cells cultured on the surface at 3 days (Rin = 2.64 e4 Ω/cm2, Rout = 140 Ω/cm2) compared to 21 days (Rin = 3.60 e4 Ω/cm2, Rout = 287 Ω/cm2) due to precipitation of magnesium and calcium phosphates over time. Samples with preosteoblasts cultured on the surface had a slower initial corrosion (3 day, Rin = 1.88 e5 Ω/cm2, Rout = 1060 Ω/cm2) which was observed to increase over time (21 day, Rin = 2.99 e4 Ω/cm2, Rout = 287 Ω/cm2). Changes in the corrosion processes were thought to be related to changes in the coverage provided by the cell layer. Our results reveal that the presence of cells and biological processes are able to significantly influence the corrosion rate of AZ91. PMID:25715925

Idealized Simulations of a Squall Line from the MC3E Field Campaign Applying Three Bin Microphysics Schemes: Dynamic and Thermodynamic Structure

Energy Technology Data Exchange (ETDEWEB)

Xue, Lulin [National Center for Atmospheric Research, Boulder, Colorado; Fan, Jiwen [Pacific Northwest National Laboratory, Richland, Washington; Lebo, Zachary J. [University of Wyoming, Laramie, Wyoming; Wu, Wei [National Center for Atmospheric Research, Boulder, Colorado; University of Illinois at Urbana–Champaign, Urbana, Illinois; Morrison, Hugh [National Center for Atmospheric Research, Boulder, Colorado; Grabowski, Wojciech W. [National Center for Atmospheric Research, Boulder, Colorado; Chu, Xia [University of Wyoming, Laramie, Wyoming; Geresdi, István [University of Pécs, Pécs, Hungary; North, Kirk [McGill University, Montréal, Québec, Canada; Stenz, Ronald [University of North Dakota, Grand Forks, North Dakota; Gao, Yang [Pacific Northwest National Laboratory, Richland, Washington; Lou, Xiaofeng [Chinese Academy of Meteorological Sciences, Beijing, China; Bansemer, Aaron [National Center for Atmospheric Research, Boulder, Colorado; Heymsfield, Andrew J. [National Center for Atmospheric Research, Boulder, Colorado; McFarquhar, Greg M. [National Center for Atmospheric Research, Boulder, Colorado; University of Illinois at Urbana–Champaign, Urbana, Illinois; Rasmussen, Roy M. [National Center for Atmospheric Research, Boulder, Colorado

2017-12-01

The squall line event on May 20, 2011, during the Midlatitude Continental Convective Clouds (MC3E) field campaign has been simulated by three bin (spectral) microphysics schemes coupled into the Weather Research and Forecasting (WRF) model. Semi-idealized three-dimensional simulations driven by temperature and moisture profiles acquired by a radiosonde released in the pre-convection environment at 1200 UTC in Morris, Oklahoma show that each scheme produced a squall line with features broadly consistent with the observed storm characteristics. However, substantial differences in the details of the simulated dynamic and thermodynamic structure are evident. These differences are attributed to different algorithms and numerical representations of microphysical processes, assumptions of the hydrometeor processes and properties, especially ice particle mass, density, and terminal velocity relationships with size, and the resulting interactions between the microphysics, cold pool, and dynamics. This study shows that different bin microphysics schemes, designed to be conceptually more realistic and thus arguably more accurate than bulk microphysics schemes, still simulate a wide spread of microphysical, thermodynamic, and dynamic characteristics of a squall line, qualitatively similar to the spread of squall line characteristics using various bulk schemes. Future work may focus on improving the representation of ice particle properties in bin schemes to reduce this uncertainty and using the similar assumptions for all schemes to isolate the impact of physics from numerics.

Toward real-time Monte Carlo simulation using a commercial cloud computing infrastructure.

Science.gov (United States)

Wang, Henry; Ma, Yunzhi; Pratx, Guillem; Xing, Lei

2011-09-07

Monte Carlo (MC) methods are the gold standard for modeling photon and electron transport in a heterogeneous medium; however, their computational cost prohibits their routine use in the clinic. Cloud computing, wherein computing resources are allocated on-demand from a third party, is a new approach for high performance computing and is implemented to perform ultra-fast MC calculation in radiation therapy. We deployed the EGS5 MC package in a commercial cloud environment. Launched from a single local computer with Internet access, a Python script allocates a remote virtual cluster. A handshaking protocol designates master and worker nodes. The EGS5 binaries and the simulation data are initially loaded onto the master node. The simulation is then distributed among independent worker nodes via the message passing interface, and the results aggregated on the local computer for display and data analysis. The described approach is evaluated for pencil beams and broad beams of high-energy electrons and photons. The output of cloud-based MC simulation is identical to that produced by single-threaded implementation. For 1 million electrons, a simulation that takes 2.58 h on a local computer can be executed in 3.3 min on the cloud with 100 nodes, a 47× speed-up. Simulation time scales inversely with the number of parallel nodes. The parallelization overhead is also negligible for large simulations. Cloud computing represents one of the most important recent advances in supercomputing technology and provides a promising platform for substantially improved MC simulation. In addition to the significant speed up, cloud computing builds a layer of abstraction for high performance parallel computing, which may change the way dose calculations are performed and radiation treatment plans are completed.

Toward real-time Monte Carlo simulation using a commercial cloud computing infrastructure

International Nuclear Information System (INIS)

Wang, Henry; Ma Yunzhi; Pratx, Guillem; Xing Lei

2011-01-01

Monte Carlo (MC) methods are the gold standard for modeling photon and electron transport in a heterogeneous medium; however, their computational cost prohibits their routine use in the clinic. Cloud computing, wherein computing resources are allocated on-demand from a third party, is a new approach for high performance computing and is implemented to perform ultra-fast MC calculation in radiation therapy. We deployed the EGS5 MC package in a commercial cloud environment. Launched from a single local computer with Internet access, a Python script allocates a remote virtual cluster. A handshaking protocol designates master and worker nodes. The EGS5 binaries and the simulation data are initially loaded onto the master node. The simulation is then distributed among independent worker nodes via the message passing interface, and the results aggregated on the local computer for display and data analysis. The described approach is evaluated for pencil beams and broad beams of high-energy electrons and photons. The output of cloud-based MC simulation is identical to that produced by single-threaded implementation. For 1 million electrons, a simulation that takes 2.58 h on a local computer can be executed in 3.3 min on the cloud with 100 nodes, a 47x speed-up. Simulation time scales inversely with the number of parallel nodes. The parallelization overhead is also negligible for large simulations. Cloud computing represents one of the most important recent advances in supercomputing technology and provides a promising platform for substantially improved MC simulation. In addition to the significant speed up, cloud computing builds a layer of abstraction for high performance parallel computing, which may change the way dose calculations are performed and radiation treatment plans are completed. (note)

Toward real-time Monte Carlo simulation using a commercial cloud computing infrastructure

Energy Technology Data Exchange (ETDEWEB)

Wang, Henry [Department of Electrical Engineering, Stanford University, Stanford, CA 94305 (United States); Ma Yunzhi; Pratx, Guillem; Xing Lei, E-mail: hwang41@stanford.edu [Department of Radiation Oncology, Stanford University School of Medicine, Stanford, CA 94305-5847 (United States)

2011-09-07

Monte Carlo (MC) methods are the gold standard for modeling photon and electron transport in a heterogeneous medium; however, their computational cost prohibits their routine use in the clinic. Cloud computing, wherein computing resources are allocated on-demand from a third party, is a new approach for high performance computing and is implemented to perform ultra-fast MC calculation in radiation therapy. We deployed the EGS5 MC package in a commercial cloud environment. Launched from a single local computer with Internet access, a Python script allocates a remote virtual cluster. A handshaking protocol designates master and worker nodes. The EGS5 binaries and the simulation data are initially loaded onto the master node. The simulation is then distributed among independent worker nodes via the message passing interface, and the results aggregated on the local computer for display and data analysis. The described approach is evaluated for pencil beams and broad beams of high-energy electrons and photons. The output of cloud-based MC simulation is identical to that produced by single-threaded implementation. For 1 million electrons, a simulation that takes 2.58 h on a local computer can be executed in 3.3 min on the cloud with 100 nodes, a 47x speed-up. Simulation time scales inversely with the number of parallel nodes. The parallelization overhead is also negligible for large simulations. Cloud computing represents one of the most important recent advances in supercomputing technology and provides a promising platform for substantially improved MC simulation. In addition to the significant speed up, cloud computing builds a layer of abstraction for high performance parallel computing, which may change the way dose calculations are performed and radiation treatment plans are completed. (note)

Model of E-Cloud Instability in the Fermilab Recycler

Energy Technology Data Exchange (ETDEWEB)

Balbekov, V. [Fermi National Accelerator Lab. (FNAL), Batavia, IL (United States)

2015-06-24

Simple model of electron cloud is developed in the paper to explain e-cloud instability of bunched proton beam in the Fermilab Recycler. The cloud is presented as an immobile snake in strong vertical magnetic field. The instability is treated as an amplification of the bunch injection errors from the batch head to its tail. Nonlinearity of the e-cloud field is taken into account. Results of calculations are compared with experimental data demonstrating good correlation.

Antiparticle cloud temperatures for antihydrogen experiments

Science.gov (United States)

Bianconi, A.; Charlton, M.; Lodi Rizzini, E.; Mascagna, V.; Venturelli, L.

2017-07-01

A simple rate-equation description of the heating and cooling of antiparticle clouds under conditions typical of those found in antihydrogen formation experiments is developed and analyzed. We include single-particle collisional, radiative, and cloud expansion effects and, from the modeling calculations, identify typical cooling phenomena and trends and relate these to the underlying physics. Some general rules of thumb of use to experimenters are derived.

Cloud computing with e-science applications

CERN Document Server

Terzo, Olivier

2015-01-01

The amount of data in everyday life has been exploding. This data increase has been especially significant in scientific fields, where substantial amounts of data must be captured, communicated, aggregated, stored, and analyzed. Cloud Computing with e-Science Applications explains how cloud computing can improve data management in data-heavy fields such as bioinformatics, earth science, and computer science. The book begins with an overview of cloud models supplied by the National Institute of Standards and Technology (NIST), and then:Discusses the challenges imposed by big data on scientific

The Impact of Cloud Computing Technologies in E-learning

Directory of Open Access Journals (Sweden)

Hosam Farouk El-Sofany

2013-01-01

Full Text Available Cloud computing is a new computing model which is based on the grid computing, distributed computing, parallel computing and virtualization technologies define the shape of a new technology. It is the core technology of the next generation of network computing platform, especially in the field of education, cloud computing is the basic environment and platform of the future E-learning. It provides secure data storage, convenient internet services and strong computing power. This article mainly focuses on the research of the application of cloud computing in E-learning environment. The research study shows that the cloud platform is valued for both students and instructors to achieve the course objective. The paper presents the nature, benefits and cloud computing services, as a platform for e-learning environment.

Influence of MC3T3-E1 preosteoblast culture on the corrosion of a T6-treated AZ91 alloy.

Science.gov (United States)

Brooks, Emily K; Tobias, Menachem E; Yang, Shuying; Bone, Lawrence B; Ehrensberger, Mark T

2016-02-01

This study investigated the corrosion of artificially aged T6 heat-treated Mg-9%Al-1%Zn (AZ91) for biomedical applications. Corrosion tests and surface analysis were completed both with and without a monolayer of mouse preosteoblast MC3T3-E1 cells cultured on the sample. Electrochemical impedance spectroscopy (EIS) and inductively coupled plasma mass spectroscopy (ICPMS) were used to explore the corrosion processes after either 3 or 21 days of AZ91 incubation in cell culture medium (CCM). The EIS showed both the inner layer resistance (Rin ) and outer layer resistance (Rout ) were lower for samples without cells cultured on the surface at 3 days (Rin  = 2.64 e4 Ω/cm(2) , Rout  = 140 Ω/cm(2) ) compared to 21 days (Rin  = 3.60 e4 Ω/cm(2) , Rout  = 287 Ω/cm(2) ) due to precipitation of magnesium and calcium phosphates over time. Samples with preosteoblasts cultured on the surface had a slower initial corrosion (3 day, Rin  = 1.88 e5 Ω/cm(2) , Rout  = 1060 Ω/cm(2) ) which was observed to increase over time (21 day, Rin  = 2.99 e4 Ω/cm(2) , Rout  = 287 Ω/cm(2) ). Changes in the corrosion processes were thought to be related to changes in the coverage provided by the cell layer. Our results reveal that the presence of cells and biological processes are able to significantly influence the corrosion rate of AZ91. © 2015 Wiley Periodicals, Inc.

From 2D to 3D: The morphology, proliferation and differentiation of MC3T3-E1 on silk fibroin/chitosan matrices.

Science.gov (United States)

Li, Da-Wei; He, Feng-Li; He, Jin; Deng, Xudong; Liu, Ya-Li; Liu, Yang-Yang; Ye, Ya-Jing; Yin, Da-Chuan

2017-12-15

It has been widely accepted that cell culture in two-dimensional (2D) conditions may not be able to represent growth in three-dimensional (3D) conditions. Systematic comparisons between 2D and 3D cell cultures are needed to appropriately use the existing 2D results. In this work, we conducted a comparative study between 2D and 3D cell cultures of MC3T3-E1 using the same type of material (a mixture of silk fibroin (SF) and chitosan (CS)). Our results showed 3D SF/CS scaffold exhibited different effects on cell culture compared with the 2D cases. 1) The cells grown in 3D scaffold showed multiple morphologies. 2) The proliferation of cells in 3D scaffold was long-term and sustainable. 3) Cell differentiation occurred throughout the entire 3D scaffold. The results showed that cell culture in 3D SF/CS scaffold exhibited different features than 2D cases and 3D SF/CS scaffold could be a promising material for 3D cell culture. Copyright © 2017 Elsevier Ltd. All rights reserved.

CSN1S2 protein of goat milk inhibits the decrease of viability and increases the proliferation of MC3T3E1 pre-osteoblast cell in methyl glyoxal exposure

Directory of Open Access Journals (Sweden)

Choirunil Chotimah

2015-03-01

Full Text Available Objective: To investigate whether the CNS1S2 protein of goat milk is able to inhibit the toxicity of methyl glyoxal (MG towards MC3T3E1 pre-osteoblast cells. Methods: At confluency, pre-osteoblast cells were divided into five groups which included control (untreated, pre-osteoblast cells exposed to 5 µmol/L MG, pre-osteoblast cells exposed to MG in the presence of CSN1S2 protein at doses of 0.025, 0.050, and 0.100 mg/L, respectively. Analysis of reactive oxygen species was done with 2,7-dichlorodihydrofluorescein diacetate fluorochrome. The proliferation and viability of MC3T3E1 cells were measured by trypan blue staining. Malondialdehyde analysis was done colorimetrically. Results: Cell's viabilities were significantly lower in MG+0.050 mg/L CSN1S2 protein of goat milk compared to MG group (P<0.05. MG+0.100 mg/L CSN1S2 protein of goat milk significantly increased the cells viability compared to MG group (P<0.05. The levels of proliferation were significantly higher in MG+0.100 mg/L CSN1S2 protein of goat milk compared to control group and all treatment groups, respectively (P<0.05. Conclusions: High dose of CSN1S2 protein of goat milk (0.100 mg/L in high MG environment inhibits the decrease of viability due to the increases of the proliferation of MC3T3E1 preosteoblast cell.

Inhibition of microRNA-214-5p promotes cell survival and extracellular matrix formation by targeting collagen type IV alpha 1 in osteoblastic MC3T3-E1 cells.

Science.gov (United States)

Li, Q S; Meng, F Y; Zhao, Y H; Jin, C L; Tian, J; Yi, X J

2017-08-01

This study aimed to investigate the functional effects of microRNA (miR)-214-5p on osteoblastic cells, which might provide a potential role of miR-214-5p in bone fracture healing. Blood samples were obtained from patients with hand fracture or intra-articular calcaneal fracture and from healthy controls (HCs). Expression of miR-214-5p was monitored by qRT-PCR at day 7, 14 and 21 post-surgery. Mouse osteoblastic MC3T3-E1 cells were transfected with antisense oligonucleotides (ASO)-miR-214-5p, collagen type IV alpha 1 (COL4A1) vector or their controls; thereafter, cell viability, apoptotic rate, and the expression of collagen type I alpha 1 (COL1A1), type II collagen (COL-II), and type X collagen (COL-X) were determined. Luciferase reporter assay, qRT-PCR, and Western blot were performed to ascertain whether COL4A1 was a target of miR-214-5p. Plasma miR-214-5p was highly expressed in patients with bone fracture compared with HCs after fracture (p extracellular matrix (ECM) formation of osteoblastic MC3T3-E1 cells by targeting COL4A1. Cite this article: Q. S. Li, F. Y. Meng, Y. H. Zhao, C. L. Jin, J. Tian, X. J. Yi. Inhibition of microRNA-214-5p promotes cell survival and extracellular matrix formation by targeting collagen type IV alpha 1 in osteoblastic MC3T3-E1 cells. Bone Joint Res 2017;6:464-471. DOI: 10.1302/2046-3758.68.BJR-2016-0208.R2. © 2017 Yi et al.

Intercomparison study and optical asphericity measurements of small ice particles in the CERN CLOUD experiment

Directory of Open Access Journals (Sweden)

L. Nichman

2017-09-01

Full Text Available Optical probes are frequently used for the detection of microphysical cloud particle properties such as liquid and ice phase, size and morphology. These properties can eventually influence the angular light scattering properties of cirrus clouds as well as the growth and accretion mechanisms of single cloud particles. In this study we compare four commonly used optical probes to examine their response to small cloud particles of different phase and asphericity. Cloud simulation experiments were conducted at the Cosmics Leaving OUtdoor Droplets (CLOUD chamber at European Organisation for Nuclear Research (CERN. The chamber was operated in a series of multi-step adiabatic expansions to produce growth and sublimation of ice particles at super- and subsaturated ice conditions and for initial temperatures of −30, −40 and −50 °C. The experiments were performed for ice cloud formation via homogeneous ice nucleation. We report the optical observations of small ice particles in deep convection and in situ cirrus simulations. Ice crystal asphericity deduced from measurements of spatially resolved single particle light scattering patterns by the Particle Phase Discriminator mark 2 (PPD-2K, Karlsruhe edition were compared with Cloud and Aerosol Spectrometer with Polarisation (CASPOL measurements and image roundness captured by the 3View Cloud Particle Imager (3V-CPI. Averaged path light scattering properties of the simulated ice clouds were measured using the Scattering Intensity Measurements for the Optical detectioN of icE (SIMONE and single particle scattering properties were measured by the CASPOL. We show the ambiguity of several optical measurements in ice fraction determination of homogeneously frozen ice in the case where sublimating quasi-spherical ice particles are present. Moreover, most of the instruments have difficulties of producing reliable ice fraction if small aspherical ice particles are present, and all of the instruments cannot

Cloud Service Platform: Hospital Information eXchange(HIX)

OpenAIRE

Fang Zhiyuan; Wei Li

2013-01-01

Health Information eXchange (HIX) is a part of Happiness Cloud Service Platform of Happiness Guangdong in Guangdong Province of China based on innovation of cloud-based business model. This article illustrates the hospital health care business services system based on cloud computing. major business functions of HIX includes integrated mobile medical information services, and mobile health information services. Key cloud service platform capabilities include appointment of HIX registration, d...

Aerosol and Cloud Properties during the Cloud Cheju ABC Plume -Asian Monsoon Experiment (CAPMEX) 2008: Linking between Ground-based and UAV Measurements

Science.gov (United States)

Kim, S.; Yoon, S.; Venkata Ramana, M.; Ramanathan, V.; Nguyen, H.; Park, S.; Kim, M.

2009-12-01

Cheju Atmospheric Brown Cloud (ABC) Plume-Monsoon Experiment (CAPMEX), comprehsensive ground-based measurements and a series of data-gathering flights by specially equipped autonomous unmanned aerial vehicles (AUAVs) for aerosol and cloud, had conducted at Jeju (formerly, Cheju), South Korea during August-September 2008, to improve our understanding of how the reduction of anthropogenic emissions in China (so-called “great shutdown” ) during and after the Summer Beijing Olympic Games 2008 effcts on the air quliaty and radiation budgets and how atmospheric brown clouds (ABCs) influences solar radiation budget off Asian continent. Large numbers of in-situ and remote sensing instruments at the Gosan ABC observatory and miniaturized instruments on the aircraft measure a range of properties such as the quantity of soot, size-segregated aerosol particle numbers, total particle numbers, size-segregated cloud droplet numbers (only AUAV), aerosol scattering properties (only ground), aerosol vertical distribution, column-integrated aerosol properties, and meteorological variables. By integrating ground-level and high-elevation AUAV measurements with NASA-satellite observations (e.g., MODIS, CALIPSO), we investigate the long range transport of aerosols, the impact of ABCs on clouds, and the role of biogenic and anthropogenic aerosols on cloud condensation nuclei (CCN). In this talk, we will present the results from CAPMEX focusing on: (1) the characteristics of aerosol optical, physical and chemical properties at Gosan observatory, (2) aerosol solar heating calculated from the ground-based micro-pulse lidar and AERONET sun/sky radiometer synergy, and comparison with direct measurements from UAV, and (3) aerosol-cloud interactions in conjunction with measurements by satellites and Gosan observatory.

Making the most of cloud storage - a toolkit for exploitation by WLCG experiments

Science.gov (United States)

Alvarez Ayllon, Alejandro; Arsuaga Rios, Maria; Bitzes, Georgios; Furano, Fabrizio; Keeble, Oliver; Manzi, Andrea

2017-10-01

Understanding how cloud storage can be effectively used, either standalone or in support of its associated compute, is now an important consideration for WLCG. We report on a suite of extensions to familiar tools targeted at enabling the integration of cloud object stores into traditional grid infrastructures and workflows. Notable updates include support for a number of object store flavours in FTS3, Davix and gfal2, including mitigations for lack of vector reads; the extension of Dynafed to operate as a bridge between grid and cloud domains; protocol translation in FTS3; the implementation of extensions to DPM (also implemented by the dCache project) to allow 3rd party transfers over HTTP. The result is a toolkit which facilitates data movement and access between grid and cloud infrastructures, broadening the range of workflows suitable for cloud. We report on deployment scenarios and prototype experience, explaining how, for example, an Amazon S3 or Azure allocation can be exploited by grid workflows.

[The effects of platelet-rich fibrin extract on MC3T3-E1 cells cultured on the titanium discs].

Science.gov (United States)

Zhang, X J; Xu, S; Meng, W Y; Xiao, H J; Dong, K; Liu, Z H

2017-01-09

Objective: To evaluate the effect of platelet-rich fibrin extract (PRFe) on the adhesion, proliferation and differentiation of MC3T3-E1 cells cultured on the titanium discs. Methods: Samples were divided into experimental group (P) and control group (D). Group P used the α-minimal essential medium (α-MEM) containing PRFe (0.5%), while group D used only the α-MEM. Cell adhesion and cytoskeleton were observed using scanning electron microscopy (SEM) and laser scanning confocal microscopy (LSCM). Methyl thiazolyl tetrazolium (MTT) assay to detect the number of the osteoblasts at 1, 3, 5, 7 d; the activity of alkaline phosphatase (ALP) to detect the differentiation of osteoblast at 1, 3, 5, 7 d; the level of osteogenetic biomarkers core-binding factorα1 (cbfα1) and osteocalcin (OCN) were quantified by quantitative real-time PCR (qRT-PCR) at 3 and 7 d. Results: SEM and LSCM showed that the adhesion and filaments of group P were higher than those of group D at each time point. MTT assay showed that the absorbance were significantly increased in group P (1 d: 0.299±0.002, 3 d: 0.517±0.004, 5 d: 0.810±0.002, 7 d: 1.203±0.011) compared with group D (1 d: 0.198±0.003, 3 d: 0.399±0.002, 5 d: 0.588±0.002, 7 d: 0.897±0.005) at each time points ( P< 0.05). Furthermore, the ALP activity of group P (1 d: 0.162±0.004, 3 d: 0.289±0.001, 5 d: 0.491±0.006, 7 d: 0.647±0.005) was significantly higher than that of group D (1 d: 0.121±0.003, 3 d: 0.191± 0.006, 5 d: 0.252±0.004, 7 d: 0.365±0.012), ( P< 0.05). Moreover, the qRT-PCR showed that the Cbfα1 and OCN gene expression in group P (Cfbα1, 3 d: 1.50±0.04, 7 d: 1.94±0.06; OCN, 3 d: 3.37±0.17, 7 d: 3.92± 0.04) were significantly higher than that in group D(Cfbα1, 3 d: 1, 7 d: 1.18±0.13; OCN, 3 d: 1, 7 d: 2.34± 0.09) ( P< 0.05). Conclusions: PRFe promoted the adhension, proliferation and differentiation of MC3T3-E1 cells on the titanium discs.

Blast experiments for the derivation of initial cloud dimensions after a ''Dirty Bomb'' event

International Nuclear Information System (INIS)

Thielen, H.; Schroedl, E.

2004-01-01

Basis for the assessment of potential consequences of a ''dirty bomb'' event is the calculation of the atmospheric dispersion of airborne particles. The empirical derivation of parameters for the estimation of the initial pollutant cloud dimensions was the principal purpose for blast experiments performed in the training area Munster in summer 2003 with the participation of several highly engaged German organisations and institutions. The experiments were performed under variation of parameters like mass and kind of explosive, subsurface characteristics or meteorological conditions and were documented by digital video recording. The blasting experiments supplied significant results under reproducible conditions. The initial cloud dimension was primarily influenced by the explosive mass. The influence of other parameters was relatively small and within the range of the experimental uncertainties. Based on these experimental results a new correlation was determined for the empirical estimation of the initial cloud dimensions as a function of explosive mass. The observed initial cloud volumes were more than an order of magnitude smaller than those calculated with other widely-used formulas (e.g. HOTSPOT). As a smaller volume of the initial cloud leads to higher near-ground concentration maxima, our results support an appropriate adjustment of currently employed calculation methods. (orig.)

Developing cloud applications using the e-Science Central platform.

Science.gov (United States)

Hiden, Hugo; Woodman, Simon; Watson, Paul; Cala, Jacek

2013-01-28

This paper describes the e-Science Central (e-SC) cloud data processing system and its application to a number of e-Science projects. e-SC provides both software as a service (SaaS) and platform as a service for scientific data management, analysis and collaboration. It is a portable system and can be deployed on both private (e.g. Eucalyptus) and public clouds (Amazon AWS and Microsoft Windows Azure). The SaaS application allows scientists to upload data, edit and run workflows and share results in the cloud, using only a Web browser. It is underpinned by a scalable cloud platform consisting of a set of components designed to support the needs of scientists. The platform is exposed to developers so that they can easily upload their own analysis services into the system and make these available to other users. A representational state transfer-based application programming interface (API) is also provided so that external applications can leverage the platform's functionality, making it easier to build scalable, secure cloud-based applications. This paper describes the design of e-SC, its API and its use in three different case studies: spectral data visualization, medical data capture and analysis, and chemical property prediction.

Nonlinear Effects at the Fermilab Recycler e-Cloud Instability

Energy Technology Data Exchange (ETDEWEB)

Balbekov, V. [Fermi National Accelerator Lab. (FNAL), Batavia, IL (United States)

2016-06-10

Theoretical analysis of e-cloud instability in the Fermilab Recycler is represented in the paper. The e-cloud in strong magnetic field is treated as a set of immovable snakes each being initiated by some proton bunch. It is shown that the instability arises because of injection errors of the bunches which increase in time and from bunch to bunch along the batch being amplified by the e-cloud electric field. The particular attention is given to nonlinear additions to the cloud field. It is shown that the nonlinearity is the main factor which restricts growth of the bunch amplitude. Possible role of the field free parts of the Recycler id discussed as well. Results of calculations are compared with experimental data demonstrating good correlation.

Experiments with a laser cooled cloud of atoms

International Nuclear Information System (INIS)

Natarajan, Vasant; Banerjee, Ayan; Rapol, Umakant

1999-01-01

We discuss two experiments that can be performed using a cloud of laser-cooled and trapped atoms, namely Bose-Einstein condensation (BEC) and search for a permanent Electric Dipole Moment (EDM). BEC can be observed in Rb atoms in a magnetic trap by using forced evaporative cooling to continuously lower the temperature below the condensation limit. The cloud is cooled by preferentially ejecting the hottest atoms from a magnetic trap. The magnetic trap is loaded with laser-cooled atoms from a magneto-optic trap. The EDM experiment can be performed with a laser-cooled cloud of Yb atoms. The atoms are spin polarized and the precession of the spin is measured in the presence of a strong electric field applied perpendicular to the spin direction. The use of laser-cooled atoms should greatly enhance the sensitivity of the experiment. (author)

Interstellar clouds toward 3C 154 and 3C 353

International Nuclear Information System (INIS)

Federman, S.R.; Evans, N.J. II; Willson, R.F.; Falgarone, E.; Combes, F.; Texas Univ., Austin; Tufts Univ., Medford, MA; Meudon, Observatoire, France)

1987-01-01

Molecular observations of the interstellar clouds toward the radio sources 3C 154 and 3C 353 were obtained in order to elucidate the physical conditions within the clouds. Maps of (C-12)O emission in the J = 1-0 and J = 2-1 lines were compared with observations of the (C-13)O, CH, and OH molecules. The peak emission in the (C-12)O transitions does not occur in the direction of the continuum sources, and thus, an incomplete picture arises when only one line of sight in the two clouds is analyzed. The cloud toward 3C 154 appears to have a low extinction, but a relatively high CO abundance, suggesting that it is similar to high-latitude clouds and CO-rich diffuse clouds. The cloud toward 3C 353 is considerably denser than that toward 3C 154 and may be more like a dark cloud. 32 references

E=mc$^{2}$ l'équation de tous les possibles

CERN Document Server

Galfard, Christophe

2017-01-01

"E=mc² est une espèce de signal, un panneau marquant l'entrée dans une nouvelle réalité, différente de celle que nous connaissons tous. Et cela a des implications profondes dans le monde de l'infiniment petit comme dans celui de l'infiniment grand..." E=mc², la plus célèbre de toutes les équations... Elle a bouleversé à jamais la façon dont nous comprenons le monde, en libérant pour commencer la colossale énergie enfermée dans les noyaux des atomes. Mais que signifie vraiment cette formule ? Pour le savoir, laissez Christophe Galfard vous raconter l'équation de tous les possibles. Plongez dans un univers d'énergie pure où tous vos repères seront définitivement abolis...

Cloud-resolving model intercomparison of an MC3E squall line case: Part I-Convective updrafts: CRM Intercomparison of a Squall Line

Energy Technology Data Exchange (ETDEWEB)

Fan, Jiwen [Pacific Northwest National Laboratory, Richland Washington USA; Han, Bin [Pacific Northwest National Laboratory, Richland Washington USA; School of Atmospheric Sciences, Nanjing University, Nanjing China; Varble, Adam [Department of Atmospheric Sciences, University of Utah, Salt Lake City Utah USA; Morrison, Hugh [National Center for Atmospheric Research, Boulder Colorado USA; North, Kirk [Department of Atmospheric and Oceanic Sciences, McGill University, Montreal Quebec USA; Kollias, Pavlos [Department of Atmospheric and Oceanic Sciences, McGill University, Montreal Quebec USA; School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook New York USA; Chen, Baojun [School of Atmospheric Sciences, Nanjing University, Nanjing China; Dong, Xiquan [Department of Hydrology and Atmospheric Sciences, University of Arizona, Tucson Arizona USA; Giangrande, Scott E. [Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton New York USA; Khain, Alexander [The Institute of the Earth Science, The Hebrew University of Jerusalem, Jerusalem Israel; Lin, Yun [Department of Atmospheric Sciences, Texas A& M University, College Station Texas USA; Mansell, Edward [NOAA/OAR/National Severe Storms Laboratory, Norman Oklahoma USA; Milbrandt, Jason A. [Meteorological Research Division, Environment and Climate Change Canada, Dorval Canada; Stenz, Ronald [Department of Atmospheric Sciences, University of North Dakota, Grand Forks North Dakota USA; Thompson, Gregory [National Center for Atmospheric Research, Boulder Colorado USA; Wang, Yuan [Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena California USA

2017-09-06

A constrained model intercomparison study of a mid-latitude mesoscale squall line is performed using the Weather Research & Forecasting (WRF) model at 1-km horizontal grid spacing with eight cloud microphysics schemes, to understand specific processes that lead to the large spread of simulated cloud and precipitation at cloud-resolving scales, with a focus of this paper on convective cores. Various observational data are employed to evaluate the baseline simulations. All simulations tend to produce a wider convective area than observed, but a much narrower stratiform area, with most bulk schemes overpredicting radar reflectivity. The magnitudes of the virtual potential temperature drop, pressure rise, and the peak wind speed associated with the passage of the gust front are significantly smaller compared with the observations, suggesting simulated cool pools are weaker. Simulations also overestimate the vertical velocity and Ze in convective cores as compared with observational retrievals. The modeled updraft velocity and precipitation have a significant spread across the eight schemes even in this strongly dynamically-driven system. The spread of updraft velocity is attributed to the combined effects of the low-level perturbation pressure gradient determined by cold pool intensity and buoyancy that is not necessarily well correlated to differences in latent heating among the simulations. Variability of updraft velocity between schemes is also related to differences in ice-related parameterizations, whereas precipitation variability increases in no-ice simulations because of scheme differences in collision-coalescence parameterizations.

Behaviors of MC3T3-E1 cells on carbonated apatite films, with a characteristic network structure, fabricated on a titanium plate by aqueous spray coating

International Nuclear Information System (INIS)

Mochizuki, Chihiro; Hara, Hiroki; Oya, Kei; Aoki, Shun; Hayakawa, Tohru; Fujie, Hiromichi; Sato, Mitsunobu

2014-01-01

Four carbonated apatite films having average thicknesses of 1.3–0.11 μm, proportions of network sizes above 10 μm of 41–68%, and average border heights of the characteristic network structure of 0.98–0.29 μm were fabricated on a titanium plate by aqueous spray coating. These carbonated apatite films after heat treatment showed good mineralization ability in Hanks' balanced salt solution. Assessment of initial cell attachment and calcination on these films and on the Ti plate using osteoblastic MC3T3-E1 indicated that the carbonated apatite film heat treated at 600 °C, whose film thickness, proportion of network sizes above 10 μm, and border height were 0.11 μm, 61%, and 0.31 μm, respectively, was most preferred by osteoblastic cells. Field emission scanning electron microscopic observation of the cells attached to the films showed that the wide network and low border height of the network structure on the carbonated apatite film play an important role in the development of the filopodia of the osteoblastic cells. - Highlights: • Osteoblastic MC3T3-E1 behaviors on aqueous spray coating-derived carbonated apatite (CA) films • The network size of CA films is important. • CA films having a low network border height are better for cell proliferation

Behaviors of MC3T3-E1 cells on carbonated apatite films, with a characteristic network structure, fabricated on a titanium plate by aqueous spray coating

Energy Technology Data Exchange (ETDEWEB)

Mochizuki, Chihiro; Hara, Hiroki [Division of Liberal Arts, Kogakuin University, 2665-1 Nakano, Hachioji, Tokyo 192-0015 (Japan); Oya, Kei [Research Institute for Science and Technology, Kogakuin University, 2665-1 Nakano, Hachioji, Tokyo 192-0015 (Japan); School of Engineering, Tokai University, 4-1-1 Kitakanane, Hiratsuka, Kanagawa 259-1292 (Japan); Aoki, Shun [Faculty of System Design, Tokyo Metropolitan University, 6-6 Asahigaoka, Hino, Tokyo 191-0065 (Japan); Hayakawa, Tohru [Department of Dental Engineering, Tsurumi University School of Dental Medicine, 2-1-3 Tsurumi, Yokohama City, Kanagawa 230-8501 (Japan); Fujie, Hiromichi [Faculty of System Design, Tokyo Metropolitan University, 6-6 Asahigaoka, Hino, Tokyo 191-0065 (Japan); Sato, Mitsunobu, E-mail: lccsato@cc.kogakuin.ac.jp [Division of Liberal Arts, Kogakuin University, 2665-1 Nakano, Hachioji, Tokyo 192-0015 (Japan)

2014-06-01

Four carbonated apatite films having average thicknesses of 1.3–0.11 μm, proportions of network sizes above 10 μm of 41–68%, and average border heights of the characteristic network structure of 0.98–0.29 μm were fabricated on a titanium plate by aqueous spray coating. These carbonated apatite films after heat treatment showed good mineralization ability in Hanks' balanced salt solution. Assessment of initial cell attachment and calcination on these films and on the Ti plate using osteoblastic MC3T3-E1 indicated that the carbonated apatite film heat treated at 600 °C, whose film thickness, proportion of network sizes above 10 μm, and border height were 0.11 μm, 61%, and 0.31 μm, respectively, was most preferred by osteoblastic cells. Field emission scanning electron microscopic observation of the cells attached to the films showed that the wide network and low border height of the network structure on the carbonated apatite film play an important role in the development of the filopodia of the osteoblastic cells. - Highlights: • Osteoblastic MC3T3-E1 behaviors on aqueous spray coating-derived carbonated apatite (CA) films • The network size of CA films is important. • CA films having a low network border height are better for cell proliferation.

Cytotoxicity of Titanate-Calcium Complexes to MC3T3 Osteoblast-Like Cells

Science.gov (United States)

Drury, Jeanie L.; Moussi, Joelle; Taylor-Pashow, Kathryn M. L.

2016-01-01

Monosodium titanates (MST) are a relatively novel form of particulate titanium dioxide that have been proposed for biological use as metal sorbents or delivery agents, most recently calcium (II). In these roles, the toxicity of the titanate or its metal complex is crucial to its biological utility. The aim of this study was to determine the cytotoxicity of MST and MST-calcium complexes with MC3T3 osteoblast-like cells; MST-Ca(II) complexes could be useful to promote bone formation in various hard tissue applications. MC3T3 cells were exposed to native MST or MST-Ca(II) complexes for 24–72 h. A CellTiter-Blue® assay was employed to assess the metabolic activity of the cells. The results showed that MST and MST-Ca(II) suppressed MC3T3 metabolic activity significantly in a dose-, time-, and cell-density-dependent fashion. MST-Ca(II) suppressed MC3T3 metabolism in a statistically identical manner as native MST at all concentrations. We concluded that MST and MST-Ca(II) are significantly cytotoxic to MC3T3 cells through a mechanism yet unknown; this is a potential problem to the biological utility of these complexes. PMID:28044136

Cytotoxicity of Titanate-Calcium Complexes to MC3T3 Osteoblast-Like Cells

Directory of Open Access Journals (Sweden)

Yen-Wei Chen

2016-01-01

Full Text Available Monosodium titanates (MST are a relatively novel form of particulate titanium dioxide that have been proposed for biological use as metal sorbents or delivery agents, most recently calcium (II. In these roles, the toxicity of the titanate or its metal complex is crucial to its biological utility. The aim of this study was to determine the cytotoxicity of MST and MST-calcium complexes with MC3T3 osteoblast-like cells; MST-Ca(II complexes could be useful to promote bone formation in various hard tissue applications. MC3T3 cells were exposed to native MST or MST-Ca(II complexes for 24–72 h. A CellTiter-Blue® assay was employed to assess the metabolic activity of the cells. The results showed that MST and MST-Ca(II suppressed MC3T3 metabolic activity significantly in a dose-, time-, and cell-density-dependent fashion. MST-Ca(II suppressed MC3T3 metabolism in a statistically identical manner as native MST at all concentrations. We concluded that MST and MST-Ca(II are significantly cytotoxic to MC3T3 cells through a mechanism yet unknown; this is a potential problem to the biological utility of these complexes.

Aerosol-Cloud Interactions During Puijo Cloud Experiments - The effects of weather and local sources

Science.gov (United States)

Komppula, Mika; Portin, Harri; Leskinen, Ari; Romakkaniemi, Sami; Brus, David; Neitola, Kimmo; Hyvärinen, Antti-Pekka; Kortelainen, Aki; Hao, Liqing; Miettinen, Pasi; Jaatinen, Antti; Ahmad, Irshad; Lihavainen, Heikki; Laaksonen, Ari; Lehtinen, Kari E. J.

2013-04-01

The Puijo measurement station has provided continuous data on aerosol-cloud interactions since 2006. The station is located on top of the Puijo observation tower (306 m a.s.l, 224 m above the surrounding lake level) in Kuopio, Finland. The top of the tower is covered by cloud about 15 % of the time, offering perfect conditions for studying aerosol-cloud interactions. With a twin-inlet setup (total and interstitial inlets) we are able to separate the activated particles from the interstitial (non-activated) particles. The continuous twin-inlet measurements include aerosol size distribution, scattering and absorption. In addition cloud droplet number and size distribution are measured continuously with weather parameters. During the campaigns the twin-inlet system was additionally equipped with aerosol mass spectrometer (AMS) and Single Particle Soot Photometer (SP-2). This way we were able to define the differences in chemical composition of the activated and non-activated particles. Potential cloud condensation nuclei (CCN) in different supersaturations were measured with two CCN counters (CCNC). The other CCNC was operated with a Differential Mobility Analyzer (DMA) to obtain size selected CCN spectra. Other additional measurements included Hygroscopic Tandem Differential Mobility Analyzer (HTDMA) for particle hygroscopicity. Additionally the valuable vertical wind profiles (updraft velocities) are available from Halo Doppler lidar during the 2011 campaign. Cloud properties (droplet number and effective radius) from MODIS instrument onboard Terra and Aqua satellites were retrieved and compared with the measured values. This work summarizes the two latest intensive campaigns, Puijo Cloud Experiments (PuCE) 2010 & 2011. We study especially the effect of the local sources on the cloud activation behaviour of the aerosol particles. The main local sources include a paper mill, a heating plant, traffic and residential areas. The sources can be categorized and identified

Genes Responsive to Low-Intensity Pulsed Ultrasound in MC3T3-E1 Preosteoblast Cells

Directory of Open Access Journals (Sweden)

Yoshiaki Tabuchi

2013-11-01

Full Text Available Although low-intensity pulsed ultrasound (LIPUS has been shown to enhance bone fracture healing, the underlying mechanism of LIPUS remains to be fully elucidated. Here, to better understand the molecular mechanism underlying cellular responses to LIPUS, we investigated gene expression profiles in mouse MC3T3-E1 preosteoblast cells exposed to LIPUS using high-density oligonucleotide microarrays and computational gene expression analysis tools. Although treatment of the cells with a single 20-min LIPUS (1.5 MHz, 30 mW/cm2 did not affect the cell growth or alkaline phosphatase activity, the treatment significantly increased the mRNA level of Bglap. Microarray analysis demonstrated that 38 genes were upregulated and 37 genes were downregulated by 1.5-fold or more in the cells at 24-h post-treatment. Ingenuity pathway analysis demonstrated that the gene network U (up contained many upregulated genes that were mainly associated with bone morphology in the category of biological functions of skeletal and muscular system development and function. Moreover, the biological function of the gene network D (down, which contained downregulated genes, was associated with gene expression, the cell cycle and connective tissue development and function. These results should help to further clarify the molecular basis of the mechanisms of the LIPUS response in osteoblast cells.

Evaluation of the Eclipse eMC algorithm for bolus electron conformal therapy using a standard verification dataset.

Science.gov (United States)

Carver, Robert L; Sprunger, Conrad P; Hogstrom, Kenneth R; Popple, Richard A; Antolak, John A

2016-05-08

The purpose of this study was to evaluate the accuracy and calculation speed of electron dose distributions calculated by the Eclipse electron Monte Carlo (eMC) algorithm for use with bolus electron conformal therapy (ECT). The recent com-mercial availability of bolus ECT technology requires further validation of the eMC dose calculation algorithm. eMC-calculated electron dose distributions for bolus ECT have been compared to previously measured TLD-dose points throughout patient-based cylindrical phantoms (retromolar trigone and nose), whose axial cross sections were based on the mid-PTV (planning treatment volume) CT anatomy. The phantoms consisted of SR4 muscle substitute, SR4 bone substitute, and air. The treatment plans were imported into the Eclipse treatment planning system, and electron dose distributions calculated using 1% and processors (Intel Xeon E5-2690, 2.9 GHz) on a framework agent server (FAS). In comparison, the eMC was significantly more accurate than the pencil beam algorithm (PBA). The eMC has comparable accuracy to the pencil beam redefinition algorithm (PBRA) used for bolus ECT planning and has acceptably low dose calculation times. The eMC accuracy decreased when smoothing was used in high-gradient dose regions. The eMC accuracy was consistent with that previously reported for accuracy of the eMC electron dose algorithm and shows that the algorithm is suitable for clinical implementation of bolus ECT.

Influence of 3D effects on 1D aerosol retrievals in synthetic, partially clouded scenes

International Nuclear Information System (INIS)

Stap, F.A.; Hasekamp, O.P.; Emde, C.; Röckmann, T.

2016-01-01

An important challenge in aerosol remote sensing is to retrieve aerosol properties in the vicinity of clouds and in cloud contaminated scenes. Satellite based multi-wavelength, multi-angular, photo-polarimetric instruments are particularly suited for this task as they have the ability to separate scattering by aerosol and cloud particles. Simultaneous aerosol/cloud retrievals using 1D radiative transfer codes cannot account for 3D effects such as shadows, cloud induced enhancements and darkening of cloud edges. In this study we investigate what errors are introduced on the retrieved optical and micro-physical aerosol properties, when these 3D effects are neglected in retrievals where the partial cloud cover is modeled using the Independent Pixel Approximation. To this end a generic, synthetic data set of PARASOL like observations for 3D scenes with partial, liquid water cloud cover is created. It is found that in scenes with random cloud distributions (i.e. broken cloud fields) and either low cloud optical thickness or low cloud fraction, the inversion algorithm can fit the observations and retrieve optical and micro-physical aerosol properties with sufficient accuracy. In scenes with non-random cloud distributions (e.g. at the edge of a cloud field) the inversion algorithm can fit the observations, however, here the retrieved real part of the refractive indices of both modes is biased. - Highlights: • An algorithm for retrieval of both aerosol and cloud properties is presented. • Radiative transfer models of 3D, partially clouded scenes are simulated. • Errors introduced in the retrieved aerosol properties are discussed.

Best Practices for Cloud Provider Connectivity for R&E Users

CERN Document Server

Bos, Erik-Jan; Kleist, Josva; Foster, David; CERN. Geneva. IT Department

2016-01-01

R&E Networks have been in the business of serving the needs of research and education for decades. A recent development is that more and more R&E Networks are required to support the overall business of research and education for their customers. As R&E institutes have felt the pressure from governments to become more efficient and cost-effective, their interest has turned to cloud solutions for scientific applications as well as back-end office systems. The use of clouds, both commercial and private, is increasing rapidly. Large scale connectivity with cloud providers is a rather new but important area, in which R&E Networks are trying to find their way to add value. Connectivity with commercial cloud providers nowadays is an important topic, and it is becoming crucial that advice to policy makers, decision makers and procurers is given so that over time it will lead to a coherent, scalable and increasingly cost-effective solution for connecting to cloud service providers.

The human Ago2 MC region does not contain an eIF4E-like mRNA cap binding motif

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Grishin Nick V

2009-01-01

Full Text Available Abstract Background Argonaute (Ago proteins interact with small regulatory RNAs to mediate gene regulatory pathways. A recent report by Kiriakidou et al. 1 describes an MC sequence region identified in Ago2 that displays similarity to the cap-binding motif in translation initiation factor 4E (eIF4E. In a cap-bound eIF4E structure, two important aromatic residues of the motif stack on either side of a 7-methylguanosine 5'-triphosphate (m7Gppp base. The corresponding Ago2 aromatic residues (F450 and F505 were hypothesized to perform the same cap-binding function. However, the detected similarity between the MC sequence and the eIF4E cap-binding motif was questionable. Results A number of sequence-based and structure-based bioinformatics methods reveal the reported similarity between the Ago2 MC sequence region and the eIF4E cap-binding motif to be spurious. Alternatively, the MC sequence region is confidently assigned to the N-terminus of the Ago piwi module, within the mid domain of experimentally determined prokaryotic Ago structures. Confident mapping of the Ago2 MC sequence region to the piwi mid domain results in a homology-based structure model that positions the identified aromatic residues over 20 Å apart, with one of the aromatic side chains (F450 contributing instead to the hydrophobic core of the domain. Conclusion Correct functional prediction based on weak sequence similarity requires substantial evolutionary and structural support. The evolutionary context of the Ago mid domain suggested by multiple sequence alignment is limited to a conserved hydrophobicity profile required for the fold and a motif following the MC region that binds guide RNA. Mapping of the MC sequence to the mid domain structure reveals Ago2 aromatics that are incompatible with eIF4E-like mRNA cap-binding, yet display some limited local structure similarities that cause the chance sequence match to eIF4E. Reviewers This article was reviewed by Arcady Mushegian

Bone morphogenetic protein-2 (BMP-2 and transforming growth factor-β1 (TGF-β1 alter connexin 43 phosphorylation in MC3T3-E1 Cells

Directory of Open Access Journals (Sweden)

Rudkin George H

2001-07-01

Full Text Available Abstract Background Bone morphogenetic proteins (BMPs and transforming growth factor-βs (TGF-βs are important regulators of bone repair and regeneration. BMP-2 and TGF-β1 have been shown to inhibit gap junctional intercellular communication (GJIC in MC3T3-E1 cells. Connexin 43 (Cx43 has been shown to mediate GJIC in osteoblasts and it is the predominant gap junctional protein expressed in these murine osteoblast-like cells. We examined the expression, phosphorylation, and subcellular localization of Cx43 after treatment with BMP-2 or TGF-β1 to investigate a possible mechanism for the inhibition of GJIC. Results Northern blot analysis revealed no detectable change in the expression of Cx43 mRNA. Western blot analysis demonstrated no significant change in the expression of total Cx43 protein. However, significantly higher ratios of unphosphorylated vs. phosphorylated forms of Cx43 were detected after BMP-2 or TGF-β1 treatment. Immunofluorescence and cell protein fractionation revealed no detectable change in the localization of Cx43 between the cytosol and plasma membrane. Conclusions BMP-2 and TGF-β1 do not alter expression of Cx43 at the mRNA or protein level. BMP-2 and TGF-β1 may inhibit GJIC by decreasing the phosphorylated form of Cx43 in MC3T3-E1 cells.

Cosmic rays,Climate and the CERN CLOUD Experiment

CERN Multimedia

CERN. Geneva

2011-01-01

For more than two centuries, scientists have been puzzled by observations of solar-climate variability yet the lack of any established physical mechanism. Some recent observations, although disputed, suggest that clouds may be influenced by cosmic rays, which are modulated by the solar wind. The CLOUD experiment aims to settle the question of whether or not cosmic rays have a climatically-significant effect on clouds by carrying out a series of carefully-controlled measurements in a large cloud chamber exposed to a beam from the CERN PS. This talk will present the scientific motivation for CLOUD and the first results, which have recently been published in Nature (Kirkby et al. (2011). Role of sulphuric acid, ammonia and galactic cosmic rays in atmospheric aerosol nucleation. Nature 476, 429-433).

Eucalyptus Cloud to Remotely Provision e-Governance Applications

Directory of Open Access Journals (Sweden)

Sreerama Prabhu Chivukula

2011-01-01

Full Text Available Remote rural areas are constrained by lack of reliable power supply, essential for setting up advanced IT infrastructure as servers or storage; therefore, cloud computing comprising an Infrastructure-as-a-Service (IaaS is well suited to provide such IT infrastructure in remote rural areas. Additional cloud layers of Platform-as-a-Service (PaaS and Software-as-a-Service (SaaS can be added above IaaS. Cluster-based IaaS cloud can be set up by using open-source middleware Eucalyptus in data centres of NIC. Data centres of the central and state governments can be integrated with State Wide Area Networks and NICNET together to form the e-governance grid of India. Web service repositories at centre, state, and district level can be built over the national e-governance grid of India. Using Globus Toolkit, we can achieve stateful web services with speed and security. Adding the cloud layer over the e-governance grid will make a grid-cloud environment possible through Globus Nimbus. Service delivery can be in terms of web services delivery through heterogeneous client devices. Data mining using Weka4WS and DataMiningGrid can produce meaningful knowledge discovery from data. In this paper, a plan of action is provided for the implementation of the above proposed architecture.

Designing Cloud Infrastructure for Big Data in E-government

Directory of Open Access Journals (Sweden)

Jelena Šuh

2015-03-01

Full Text Available The development of new information services and technologies, especially in domains of mobile communications, Internet of things, and social media, has led to appearance of the large quantities of unstructured data. The pervasive computing also affects the e-government systems, where big data emerges and cannot be processed and analyzed in a traditional manner due to its complexity, heterogeneity and size. The subject of this paper is the design of the cloud infrastructure for big data storage and processing in e-government. The goal is to analyze the potential of cloud computing for big data infrastructure, and propose a model for effective storing, processing and analyzing big data in e-government. The paper provides an overview of current relevant concepts related to cloud infrastructure design that should provide support for big data. The second part of the paper gives a model of the cloud infrastructure based on the concepts of software defined networks and multi-tenancy. The final goal is to support projects in the field of big data in e-government

Scanning Cloud Radar Observations at Azores: Preliminary 3D Cloud Products

Energy Technology Data Exchange (ETDEWEB)

Kollias, P.; Johnson, K.; Jo, I.; Tatarevic, A.; Giangrande, S.; Widener, K.; Bharadwaj, N.; Mead, J.

2010-03-15

The deployment of the Scanning W-Band ARM Cloud Radar (SWACR) during the AMF campaign at Azores signals the first deployment of an ARM Facility-owned scanning cloud radar and offers a prelude for the type of 3D cloud observations that ARM will have the capability to provide at all the ARM Climate Research Facility sites by the end of 2010. The primary objective of the deployment of Scanning ARM Cloud Radars (SACRs) at the ARM Facility sites is to map continuously (operationally) the 3D structure of clouds and shallow precipitation and to provide 3D microphysical and dynamical retrievals for cloud life cycle and cloud-scale process studies. This is a challenging task, never attempted before, and requires significant research and development efforts in order to understand the radar's capabilities and limitations. At the same time, we need to look beyond the radar meteorology aspects of the challenge and ensure that the hardware and software capabilities of the new systems are utilized for the development of 3D data products that address the scientific needs of the new Atmospheric System Research (ASR) program. The SWACR observations at Azores provide a first look at such observations and the challenges associated with their analysis and interpretation. The set of scan strategies applied during the SWACR deployment and their merit is discussed. The scan strategies were adjusted for the detection of marine stratocumulus and shallow cumulus that were frequently observed at the Azores deployment. Quality control procedures for the radar reflectivity and Doppler products are presented. Finally, preliminary 3D-Active Remote Sensing of Cloud Locations (3D-ARSCL) products on a regular grid will be presented, and the challenges associated with their development discussed. In addition to data from the Azores deployment, limited data from the follow-up deployment of the SWACR at the ARM SGP site will be presented. This effort provides a blueprint for the effort required

FPFH-based graph matching for 3D point cloud registration

Science.gov (United States)

Zhao, Jiapeng; Li, Chen; Tian, Lihua; Zhu, Jihua

2018-04-01

Correspondence detection is a vital step in point cloud registration and it can help getting a reliable initial alignment. In this paper, we put forward an advanced point feature-based graph matching algorithm to solve the initial alignment problem of rigid 3D point cloud registration with partial overlap. Specifically, Fast Point Feature Histograms are used to determine the initial possible correspondences firstly. Next, a new objective function is provided to make the graph matching more suitable for partially overlapping point cloud. The objective function is optimized by the simulated annealing algorithm for final group of correct correspondences. Finally, we present a novel set partitioning method which can transform the NP-hard optimization problem into a O(n3)-solvable one. Experiments on the Stanford and UWA public data sets indicates that our method can obtain better result in terms of both accuracy and time cost compared with other point cloud registration methods.

Precipitating clouds observed by 1.3-GHz boundary layer radars in equatorial Indonesia

Directory of Open Access Journals (Sweden)

F. Renggono

2001-08-01

Full Text Available Temporal variations of precipitating clouds in equatorial Indonesia have been studied based on observations with 1357.5 MHz boundary layer radars at Serpong (6.4° S, 106.7° E near Jakarta and Bukittinggi (0.2° S, 100.3° E in West Sumatera. We have classified precipitating clouds into four types: stratiform, mixed stratiform-convective, deep convective, and shallow convective clouds, using the Williams et al. (1995 method. Diurnal variations of the occurrence of precipitating clouds at Serpong and Bukittinggi have showed the same characteristics, namely, that the precipitating clouds primarily occur in the afternoon and the peak of the stratiform cloud comes after the peak of the deep convective cloud. The time delay between the peaks of stratiform and deep convective clouds corresponds to the life cycle of the mesoscale convective system. The precipitating clouds which occur in the early morning at Serpong are dominated by stratiform cloud. Concerning seasonal variations of the precipitating clouds, we have found that the occurrence of the stratiform cloud is most frequent in the rainy season, while the occurrence of the deep convective cloud is predominant in the dry season.Key words. Meteorology and atmospheric dynamics (convective processes; precipitation; tropical meteorology

Generalized eMC implementation for Monte Carlo dose calculation of electron beams from different machine types.

Science.gov (United States)

Fix, Michael K; Cygler, Joanna; Frei, Daniel; Volken, Werner; Neuenschwander, Hans; Born, Ernst J; Manser, Peter

2013-05-07

The electron Monte Carlo (eMC) dose calculation algorithm available in the Eclipse treatment planning system (Varian Medical Systems) is based on the macro MC method and uses a beam model applicable to Varian linear accelerators. This leads to limitations in accuracy if eMC is applied to non-Varian machines. In this work eMC is generalized to also allow accurate dose calculations for electron beams from Elekta and Siemens accelerators. First, changes made in the previous study to use eMC for low electron beam energies of Varian accelerators are applied. Then, a generalized beam model is developed using a main electron source and a main photon source representing electrons and photons from the scattering foil, respectively, an edge source of electrons, a transmission source of photons and a line source of electrons and photons representing the particles from the scrapers or inserts and head scatter radiation. Regarding the macro MC dose calculation algorithm, the transport code of the secondary particles is improved. The macro MC dose calculations are validated with corresponding dose calculations using EGSnrc in homogeneous and inhomogeneous phantoms. The validation of the generalized eMC is carried out by comparing calculated and measured dose distributions in water for Varian, Elekta and Siemens machines for a variety of beam energies, applicator sizes and SSDs. The comparisons are performed in units of cGy per MU. Overall, a general agreement between calculated and measured dose distributions for all machine types and all combinations of parameters investigated is found to be within 2% or 2 mm. The results of the dose comparisons suggest that the generalized eMC is now suitable to calculate dose distributions for Varian, Elekta and Siemens linear accelerators with sufficient accuracy in the range of the investigated combinations of beam energies, applicator sizes and SSDs.

The Cloud Ice Mountain Experiment (CIME) 1998: experiment overview and modelling of the microphysical processes during the seeding by isentropic gas expansion

Science.gov (United States)

Wobrock, Wolfram; Flossmann, Andrea I.; Monier, Marie; Pichon, Jean-Marc; Cortez, Laurent; Fournol, Jean-François; Schwarzenböck, Alfons; Mertes, Stephan; Heintzenberg, Jost; Laj, Paolo; Orsi, Giordano; Ricci, Loretta; Fuzzi, Sandro; Brink, Harry Ten; Jongejan, Piet; Otjes, René

The second field campaign of the Cloud Ice Mountain Experiment (CIME) project took place in February 1998 on the mountain Puy de Dôme in the centre of France. The content of residual aerosol particles, of H 2O 2 and NH 3 in cloud droplets was evaluated by evaporating the drops larger than 5 μm in a Counterflow Virtual Impactor (CVI) and by measuring the residual particle concentration and the released gas content. The same trace species were studied behind a round jet impactor for the complementary interstitial aerosol particles smaller than 5 μm diameter. In a second step of experiments, the ambient supercooled cloud was converted to a mixed phase cloud by seeding the cloud with ice particles by the gas release from pressurised gas bottles. A comparison between the physical and chemical characteristics of liquid drops and ice particles allows a study of the fate of the trace constituents during the presence of ice crystals in the cloud. In the present paper, an overview is given of the CIME 98 experiment and the instrumentation deployed. The meteorological situation during the experiment was analysed with the help of a cloud scale model. The microphysics processes and the behaviour of the scavenged aerosol particles before and during seeding are analysed with the detailed microphysical model ExMix. The simulation results agreed well with the observations and confirmed the assumption that the Bergeron-Findeisen process was dominating during seeding and was influencing the partitioning of aerosol particles between drops and ice crystals. The results of the CIME 98 experiment give an insight on microphysical changes, redistribution of aerosol particles and cloud chemistry during the Bergeron-Findeisen process when acting also in natural clouds.

In vitro behavior of MC3T3-E1 preosteoblast with different annealing temperature titania nanotubes.

Science.gov (United States)

Yu, W Q; Zhang, Y L; Jiang, X Q; Zhang, F Q

2010-10-01

Titanium oxide nanotube layers by anodization have excellent potential for dental implants because of good bone cell promotion. It is necessary to evaluate osteoblast behavior on different annealing temperature titania nanotubes for actual implant designs.  Scanning Electron Microscopy, X-Ray polycrystalline Diffractometer (XRD), X-ray photoelectron Spectroscope, and Atomic Force Microscopy (AFM) were used to characterize the different annealing temperature titania nanotubes. Confocal laser scanning microscopy, MTT, and Alizarin Red-S staining were used to evaluate the MC3T3-E1 preosteoblast behavior on different annealing temperature nanotubes.  The tubular morphology was constant when annealed at 450°C and 550°C, but collapsed when annealed at 650°C. XRD exhibited the crystal form of nanotubes after formation (amorphous), after annealing at 450°C (anatase), and after annealing at 550°C (anatase/rutile). Annealing led to the complete loss of fluorine on nanotubes at 550°C. Average surface roughness of different annealing temperature nanotubes showed no difference by AFM analysis. The proliferation and mineralization of preostoblasts cultured on anatase or anatase/rutile nanotube layers were shown to be significantly higher than smooth, amorphous nanotube layers.  Annealing can change the crystal form and composition of nanotubes. The nanotubes after annealing can promote osteoblast proliferation and mineralization in vitro. © 2010 John Wiley & Sons A/S.

Service Migration from Cloud to Multi-tier Fog Nodes for Multimedia Dissemination with QoE Support.

Science.gov (United States)

Rosário, Denis; Schimuneck, Matias; Camargo, João; Nobre, Jéferson; Both, Cristiano; Rochol, Juergen; Gerla, Mario

2018-01-24

A wide range of multimedia services is expected to be offered for mobile users via various wireless access networks. Even the integration of Cloud Computing in such networks does not support an adequate Quality of Experience (QoE) in areas with high demands for multimedia contents. Fog computing has been conceptualized to facilitate the deployment of new services that cloud computing cannot provide, particularly those demanding QoE guarantees. These services are provided using fog nodes located at the network edge, which is capable of virtualizing their functions/applications. Service migration from the cloud to fog nodes can be actuated by request patterns and the timing issues. To the best of our knowledge, existing works on fog computing focus on architecture and fog node deployment issues. In this article, we describe the operational impacts and benefits associated with service migration from the cloud to multi-tier fog computing for video distribution with QoE support. Besides that, we perform the evaluation of such service migration of video services. Finally, we present potential research challenges and trends.

Meteorological observations in support of a hill cap cloud experiment

Energy Technology Data Exchange (ETDEWEB)

Nielsen, Morten

1998-06-01

Humid air flows form a hill cap cloud over the Agana mountain ridge in the north-east of Tenerife. The HILLCLOUD project utilised this cloud formation to investigate the chemical and physical properties of cloud aerosols by land based observations. The project was part of the second Aerosol characterisation Experiment (ACE-2) of the International Global Atmospheric chemistry project (IGAC). The present report describes meteorological observations in support of the hill cap cloud experiment. Time-series of wind speed, wind direction, temperature and humidity were collected at ground-based meteorological stations during a period starting one year in advance of the main campaign. A series of radiosonde detecting the upstream stability and wind profile were launched during the main campaign. (au) 5 tabs., 32 ills., 6 refs.

Validation of the MC{sup 2}-3/DIF3D Code System for Control Rod Worth via the BFS-75-1 Reactor Physics Experiment

Energy Technology Data Exchange (ETDEWEB)

Yun, Sunghwan; Kim, Sang Ji [KAERI, Daejeon (Korea, Republic of)

2016-05-15

In this paper, control rod worths of the BFS-75-1 reactor physics experiments were examined using continuous energy MCNP models and deterministic MC2-3/DIF3D models based on the ENDF/B-VII.0 library. We can conclude that the ENDF/B-VII.0 library shows very good agreement in small-size metal uranium fuel loaded core which is surrounded by the depleted uranium blanket. However, the control rod heterogeneity effect reported by the reference is not significant in this problem because the tested control rod models were configured by single rod. Hence comparison with other control rod worth measurements data such as the BFS-109-2A reactor physics experiment is planned as a future study. The BFS-75-1 critical experiment was carried out in the BFS-1 facility of IPPE in Russia within the framework of validating an early phase of KALIMER- 150 design. The Monte-Carlo model of the BFS- 75-1 critical experiment had been developed. However, due to incomplete information for the BFS- 75-1 experiments, Monte-Carlo models had been generated for the reference criticality and sodium void reactivity measurements with disk-wise homogeneous model. Recently, KAERI performed another physics experiment, BFS-109-2A, by collaborating with Russian IPPE. During the review process of the experimental report of the BFS-109-2A critical experiments, valuable information for the BFS-1 facility which can also be used for the BFS-75-1 experiments was discovered.

Towards real-time photon Monte Carlo dose calculation in the cloud

Science.gov (United States)

Ziegenhein, Peter; Kozin, Igor N.; Kamerling, Cornelis Ph; Oelfke, Uwe

2017-06-01

Near real-time application of Monte Carlo (MC) dose calculation in clinic and research is hindered by the long computational runtimes of established software. Currently, fast MC software solutions are available utilising accelerators such as graphical processing units (GPUs) or clusters based on central processing units (CPUs). Both platforms are expensive in terms of purchase costs and maintenance and, in case of the GPU, provide only limited scalability. In this work we propose a cloud-based MC solution, which offers high scalability of accurate photon dose calculations. The MC simulations run on a private virtual supercomputer that is formed in the cloud. Computational resources can be provisioned dynamically at low cost without upfront investment in expensive hardware. A client-server software solution has been developed which controls the simulations and transports data to and from the cloud efficiently and securely. The client application integrates seamlessly into a treatment planning system. It runs the MC simulation workflow automatically and securely exchanges simulation data with the server side application that controls the virtual supercomputer. Advanced encryption standards were used to add an additional security layer, which encrypts and decrypts patient data on-the-fly at the processor register level. We could show that our cloud-based MC framework enables near real-time dose computation. It delivers excellent linear scaling for high-resolution datasets with absolute runtimes of 1.1 seconds to 10.9 seconds for simulating a clinical prostate and liver case up to 1% statistical uncertainty. The computation runtimes include the transportation of data to and from the cloud as well as process scheduling and synchronisation overhead. Cloud-based MC simulations offer a fast, affordable and easily accessible alternative for near real-time accurate dose calculations to currently used GPU or cluster solutions.

The effects of low dose X-irradiation on osteoblastic MC3T3-E1 cells in vitro

Directory of Open Access Journals (Sweden)

Xu Wei

2012-06-01

Full Text Available Abstract Background It has been indicated that moderate or high dose of X-irradiation could delay fracture union and cause osteoradionecrosis, in part, mediated by its effect on proliferation and differentiation of osteoblasts. However, whether low dose irradiation (LDI has similar roles on osteoblasts is still unknown. In this study, we investigated whether and to what extent LDI could affect the proliferation, differentiation and mineralization of osteoblasts in vitro. Methods The MC3T3-E1 cells were exposed to single dose of X-irradiation with 0, 0.1, 0.5, 1.0 Gy respectively. Cell proliferation, apoptosis, alkaline phosphatase (ALP activity, and mineralization was evaluated by methylthiazoletetrazolium (MTT and bromodeoxyuridine (BrdU assay, flow cytometry, ALP viability kit and von Kossa staining, respectively. Osteocalcin (OCN and core-binding factor α1 (Cbfα1 expressions were measured by real time-PCR and western blot, respectively. Results The proliferation of the cells exposed to 2.0 Gy was significantly lower than those exposed to ≤1.0 Gy (p  Conclusions LDI have different effects on proliferation and differentiation of osteoblasts from those of high dose of X-irradiation, which might suggest that LDI could lead to promotion of frature healing through enhancing the differentiation and mineralization of osteoblasts.

The cloud paradigm applied to e-Health.

Science.gov (United States)

Vilaplana, Jordi; Solsona, Francesc; Abella; Filgueira, Rosa; Rius, Josep

2013-03-14

Cloud computing is a new paradigm that is changing how enterprises, institutions and people understand, perceive and use current software systems. With this paradigm, the organizations have no need to maintain their own servers, nor host their own software. Instead, everything is moved to the cloud and provided on demand, saving energy, physical space and technical staff. Cloud-based system architectures provide many advantages in terms of scalability, maintainability and massive data processing. We present the design of an e-health cloud system, modelled by an M/M/m queue with QoS capabilities, i.e. maximum waiting time of requests. Detailed results for the model formed by a Jackson network of two M/M/m queues from the queueing theory perspective are presented. These results show a significant performance improvement when the number of servers increases. Platform scalability becomes a critical issue since we aim to provide the system with high Quality of Service (QoS). In this paper we define an architecture capable of adapting itself to different diseases and growing numbers of patients. This platform could be applied to the medical field to greatly enhance the results of those therapies that have an important psychological component, such as addictions and chronic diseases.

The cloud paradigm applied to e-Health

Science.gov (United States)

2013-01-01

Background Cloud computing is a new paradigm that is changing how enterprises, institutions and people understand, perceive and use current software systems. With this paradigm, the organizations have no need to maintain their own servers, nor host their own software. Instead, everything is moved to the cloud and provided on demand, saving energy, physical space and technical staff. Cloud-based system architectures provide many advantages in terms of scalability, maintainability and massive data processing. Methods We present the design of an e-health cloud system, modelled by an M/M/m queue with QoS capabilities, i.e. maximum waiting time of requests. Results Detailed results for the model formed by a Jackson network of two M/M/m queues from the queueing theory perspective are presented. These results show a significant performance improvement when the number of servers increases. Conclusions Platform scalability becomes a critical issue since we aim to provide the system with high Quality of Service (QoS). In this paper we define an architecture capable of adapting itself to different diseases and growing numbers of patients. This platform could be applied to the medical field to greatly enhance the results of those therapies that have an important psychological component, such as addictions and chronic diseases. PMID:23496912

Cloud Migration Experiment Configuration and Results

Science.gov (United States)

2017-12-01

composed of an OpenStack instantiation. OpenStack is a prevailing cloud infrastructure management software that leverages Kernel Virtual Machine (KVM...the experiment. These authentication values would be based on the OpenStack credentials the experiment user commonly uses, or the global administrator...need to be changed. It should be noted that the openstack_tenant_name variable is synonymous with the project names within OpenStack . In the case

3rd International Symposium on Big Data and Cloud Computing Challenges

CERN Document Server

Neelanarayanan, V

2016-01-01

This proceedings volume contains selected papers that were presented in the 3rd International Symposium on Big data and Cloud Computing Challenges, 2016 held at VIT University, India on March 10 and 11. New research issues, challenges and opportunities shaping the future agenda in the field of Big Data and Cloud Computing are identified and presented throughout the book, which is intended for researchers, scholars, students, software developers and practitioners working at the forefront in their field. This book acts as a platform for exchanging ideas, setting questions for discussion, and sharing the experience in Big Data and Cloud Computing domain.

Comparisons of characteristics of magnetic clouds and cloud-like structures during 1995-2012

Science.gov (United States)

Lepping, R. P.; Wu, C. C.; Liou, K.

2014-12-01

Using eighteen years (1995-2012) of solar wind plasma and magnetic field data (observed by the Wind spacecraft), solar activity (e.g., sunspot number: SSN), and geomagnetic activity index (Dst), we have identified 168 magnetic clouds (MCs) and 197 magnetic cloud-like structures (MCLs), and we made relevant comparisons. The following features are found during seven different periods [Total Period (TP) during 1995-2012, first and second half period during 1995-2003 (P1) and 2004-2012 (P2), Quiet periods during 1995-1997 (Q1) and 2007-2009 (Q2), Active periods during 1998-2006 (A1) and 2010-2012 (A2)]. (1) During 1995-2012 the yearly occurrence frequency is TP = 9.3 for MCs and TP =10.9 for MCLs. (2) In the quiet periods, Q1,Q2 is higher than Q1,Q2 (i.e., Q1 > Q1 and Q2 > Q2), but Q1,Q2 is lower than during the active periods (i.e., A1 A1 and A2 A2). This is probably due to the lower interaction rate between MCs/MCLs and the quiet background solar wind during lower solar active periods in Q1, Q2, and higher interaction rate and highly disturbed background solar wind during the active periods in A1 and A2. (3) The minimum Bz (Bzmin) inside of a MC is well correlated with the intensity of geomagnetic activity, Dstmin (minimum Dst found within a storm event) for MCs (correlation coefficient, c.c. = 0.75 and the fitting function is Dstmin = -1.74+ 7.23 Bzmin), but Bzmin is not well correlated with MCLs (c.c. = 0.57). (4) MCs play a major role in producing geomagnetic storms: the absolute value of the average Dstmin for MCs (MC = -70 nT) associated geomagnetic storms is two times stronger than that for MCLs (MCL = -35 nT) due to the difference in the IMF (interplanetary magnetic field) strength. (5) Over the Total Period the SSN is not correlated with TP (c.c. = 0.27), but is well associated with TP (c.c. = 0.85). Note that the c.c. for SSN vs. P2 is better than that for SSN vs. P2. (6) Averages of IMF, solar wind speed, and density inside of the MCs are larger than those

Effect of hierarchical pore structure on ALP expression of MC3T3-E1 cells on bioglass films.

Science.gov (United States)

Yu, Cuixia; Zhuang, Junjun; Dong, Lingqing; Cheng, Kui; Weng, Wenjian

2017-08-01

Hierarchical porous bioglass films on the tantalum were designed to enhance osteointegration of metallic implants. The films were prepared by a sol-gel method using P123 as the mesopore template and polystyrene microsphere as the nanopore template. The films with 5.4nm mesopores and 100nm nanopores (MBG-100) elicited an obviously elongated morphology of the cultured MC3T3-E1 cells, as a result, a higher alkaline phosphatase level was expressed. It is suggested that the nanopores play an important role in regulating cellular behavior by initial protein adsorption through nanopore curvatures. The mesopores were proven very effective for loading rhBMP-2, and the rhBMP-2 loaded on MBG-100 films showed a better function of enhancing osteogenic differentiation, which is attributed to that the nanopore structure could expedite rhBMP-2 release and provide a microenvironment for intensifying the interaction of rhBMP-2 with the cells. Hence, the cell osteogenic differentiation can be enhanced by hierarchical porous bioglass films through both the porous structure and rhBMP-2 induction. Copyright © 2017 Elsevier B.V. All rights reserved.

Macquarie Island Cloud and Radiation Experiment (MICRE) Science Plan

Energy Technology Data Exchange (ETDEWEB)

Marchand, RT [University of Washington; Protat, A [Australian Bureau of Meterology; Alexander, SP [Australian Antarctic Division

2015-12-01

Clouds over the Southern Ocean are poorly represented in present day reanalysis products and global climate model simulations. Errors in top-of-atmosphere (TOA) broadband radiative fluxes in this region are among the largest globally, with large implications for modeling both regional and global scale climate responses (e.g., Trenberth and Fasullo 2010, Ceppi et al. 2012). Recent analyses of model simulations suggest that model radiative errors in the Southern Ocean are due to a lack of low-level postfrontal clouds (including clouds well behind the front) and perhaps a lack of supercooled liquid water that contribute most to the model biases (Bodas-Salcedo et al. 2013, Huang et al. 2014). These assessments of model performance, as well as our knowledge of cloud and aerosol properties over the Southern Ocean, rely heavily on satellite data sets. Satellite data sets are incomplete in that the observations are not continuous (i.e., they are acquired only when the satellite passes nearby), generally do not sample the diurnal cycle, and view primarily the tops of cloud systems (especially for the passive instruments). This is especially problematic for retrievals of aerosol, low-cloud properties, and layers of supercooled water embedded within (rather than at the top of) clouds, as well as estimates of surface shortwave and longwave fluxes based on these properties.

Towards an e-Health Cloud Solution for Remote Regions at Bahia-Brazil.

Science.gov (United States)

Sarinho, V T; Mota, A O; Silva, E P

2017-12-19

This paper presents CloudMedic, an e-Health Cloud solution that manages health care services in remote regions of Bahia-Brazil. For that, six main modules: Clinic, Hospital, Supply, Administrative, Billing and Health Business Intelligence, were developed to control the health flow among health actors at health institutions. They provided database model and procedures for health business rules, a standard gateway for data maintenance between web views and database layer, and a multi-front-end framework based on web views and web commands configurations. These resources were used by 2042 health actors in 261 health posts covering health demands from 118 municipalities at Bahia state. They also managed approximately 2.4 million health service 'orders and approximately 13.5 million health exams for more than 1.3 million registered patients. As a result, a collection of health functionalities available in a cloud infrastructure was successfully developed, deployed and validated in more than 28% of Bahia municipalities. A viable e-Health Cloud solution that, despite municipality limitations in remote regions, decentralized and improved the access to health care services at Bahia state.

Homomorphic encryption experiments on IBM's cloud quantum computing platform

Science.gov (United States)

Huang, He-Liang; Zhao, You-Wei; Li, Tan; Li, Feng-Guang; Du, Yu-Tao; Fu, Xiang-Qun; Zhang, Shuo; Wang, Xiang; Bao, Wan-Su

2017-02-01

Quantum computing has undergone rapid development in recent years. Owing to limitations on scalability, personal quantum computers still seem slightly unrealistic in the near future. The first practical quantum computer for ordinary users is likely to be on the cloud. However, the adoption of cloud computing is possible only if security is ensured. Homomorphic encryption is a cryptographic protocol that allows computation to be performed on encrypted data without decrypting them, so it is well suited to cloud computing. Here, we first applied homomorphic encryption on IBM's cloud quantum computer platform. In our experiments, we successfully implemented a quantum algorithm for linear equations while protecting our privacy. This demonstration opens a feasible path to the next stage of development of cloud quantum information technology.

Fine-grained Database Field Search Using Attribute-Based Encryption for E-Healthcare Clouds.

Science.gov (United States)

Guo, Cheng; Zhuang, Ruhan; Jie, Yingmo; Ren, Yizhi; Wu, Ting; Choo, Kim-Kwang Raymond

2016-11-01

An effectively designed e-healthcare system can significantly enhance the quality of access and experience of healthcare users, including facilitating medical and healthcare providers in ensuring a smooth delivery of services. Ensuring the security of patients' electronic health records (EHRs) in the e-healthcare system is an active research area. EHRs may be outsourced to a third-party, such as a community healthcare cloud service provider for storage due to cost-saving measures. Generally, encrypting the EHRs when they are stored in the system (i.e. data-at-rest) or prior to outsourcing the data is used to ensure data confidentiality. Searchable encryption (SE) scheme is a promising technique that can ensure the protection of private information without compromising on performance. In this paper, we propose a novel framework for controlling access to EHRs stored in semi-trusted cloud servers (e.g. a private cloud or a community cloud). To achieve fine-grained access control for EHRs, we leverage the ciphertext-policy attribute-based encryption (CP-ABE) technique to encrypt tables published by hospitals, including patients' EHRs, and the table is stored in the database with the primary key being the patient's unique identity. Our framework can enable different users with different privileges to search on different database fields. Differ from previous attempts to secure outsourcing of data, we emphasize the control of the searches of the fields within the database. We demonstrate the utility of the scheme by evaluating the scheme using datasets from the University of California, Irvine.

MC3D modelling of stratified explosion

International Nuclear Information System (INIS)

Picchi, S.; Berthoud, G.

1999-01-01

It is known that a steam explosion can occur in a stratified geometry and that the observed yields are lower than in the case of explosion in a premixture configuration. However, very few models are available to quantify the amount of melt which can be involved and the pressure peak that can be developed. In the stratified application of the MC3D code, mixing and fragmentation of the melt are explained by the growth of Kelvin Helmholtz instabilities due to the shear flow of the two phase coolant above the melt. Such a model is then used to recalculate the Frost-Ciccarelli tin-water experiment. Pressure peak, speed of propagation, bubble shape and erosion height are well reproduced as well as the influence of the inertial constraint (height of the water pool). (author)

MC3D modelling of stratified explosion

Energy Technology Data Exchange (ETDEWEB)

Picchi, S.; Berthoud, G. [DTP/SMTH/LM2, CEA, 38 - Grenoble (France)

1999-07-01

It is known that a steam explosion can occur in a stratified geometry and that the observed yields are lower than in the case of explosion in a premixture configuration. However, very few models are available to quantify the amount of melt which can be involved and the pressure peak that can be developed. In the stratified application of the MC3D code, mixing and fragmentation of the melt are explained by the growth of Kelvin Helmholtz instabilities due to the shear flow of the two phase coolant above the melt. Such a model is then used to recalculate the Frost-Ciccarelli tin-water experiment. Pressure peak, speed of propagation, bubble shape and erosion height are well reproduced as well as the influence of the inertial constraint (height of the water pool). (author)

77 FR 4713 - Proposed Establishment of Class E Airspace; Red Cloud, NE

Science.gov (United States)

2012-01-31

...-0426; Airspace Docket No. 11-ACE-7] Proposed Establishment of Class E Airspace; Red Cloud, NE AGENCY... action proposes to establish Class E airspace at Red Cloud, NE. Controlled airspace is necessary to accommodate new Standard Instrument Approach Procedures (SIAP) at Red Cloud Municipal Airport. The FAA is...

H2, CO, and dust absorption through cold molecular clouds

Science.gov (United States)

Lacy, John H.; Sneden, Chris; Kim, Hwihyun; Jaffe, Daniel Thomas

2017-06-01

We have made observations with IGRINS on the Harlan J. Smith telescope at McDonald Observatory of near-infrared absorption by H2, CO, and dust toward stars behind molecular clouds, primarily the TMC. Prior to these observations, the abundance of H2 in molecular clouds, relative to the commonly used tracer CO, had only been measured toward a few embedded stars, which may be surrounded by atypical gas. The new observations provide a representative sample of these molecules in cold molecular gas. We find N(H2)/Av ~ 0.9e+21, N(CO)/Av ~ 1.6e+17, and H2/CO ~ 6000. The measured H2/CO ratio is consistent with that measured toward embedded stars in various molecular clouds, but half that derived from mm-wave observations of CO emission and star counts or other determinations of Av.

McStas

DEFF Research Database (Denmark)

Willendrup, Peter Kjær; Farhi, Emmanuel; Bergbäck Knudsen, Erik

2014-01-01

experiments. McStas is being actively used for the design-update of the European Spallation Source (ESS) in Lund. This paper includes an introduction to the McStas package, recent and ongoing simulation projects. Further, new features in releases McStas 1.12c and 2.0 are discussed.......The McStas neutron ray-tracing simulation package is a collaboration between Risø DTU, ILL, University of Copenhagen and the PSI. During its lifetime, McStas has evolved to become the world leading software in the area of neutron scattering simulations for instrument design, optimisation, virtual...

Contrasting Cloud Composition Between Coupled and Decoupled Marine Boundary Layer Clouds

Science.gov (United States)

WANG, Z.; Mora, M.; Dadashazar, H.; MacDonald, A.; Crosbie, E.; Bates, K. H.; Coggon, M. M.; Craven, J. S.; Xian, P.; Campbell, J. R.; AzadiAghdam, M.; Woods, R. K.; Jonsson, H.; Flagan, R. C.; Seinfeld, J.; Sorooshian, A.

2016-12-01

Marine stratocumulus clouds often become decoupled from the vertical layer immediately above the ocean surface. This study contrasts cloud chemical composition between coupled and decoupled marine stratocumulus clouds. Cloud water and droplet residual particle composition were measured in clouds off the California coast during three airborne experiments in July-August of separate years (E-PEACE 2011, NiCE 2013, BOAS 2015). Decoupled clouds exhibited significantly lower overall mass concentrations in both cloud water and droplet residual particles, consistent with reduced cloud droplet number concentration and sub-cloud aerosol (Dp > 100 nm) number concentration, owing to detachment from surface sources. Non-refractory sub-micrometer aerosol measurements show that coupled clouds exhibit higher sulfate mass fractions in droplet residual particles, owing to more abundant precursor emissions from the ocean and ships. Consequently, decoupled clouds exhibited higher mass fractions of organics, nitrate, and ammonium in droplet residual particles, owing to effects of long-range transport from more distant sources. Total cloud water mass concentration in coupled clouds was dominated by sodium and chloride, and their mass fractions and concentrations exceeded those in decoupled clouds. Conversely, with the exception of sea salt constituents (e.g., Cl, Na, Mg, K), cloud water mass fractions of all species examined were higher in decoupled clouds relative to coupled clouds. These results suggest that an important variable is the extent to which clouds are coupled to the surface layer when interpreting microphysical data relevant to clouds and aerosol particles.

Aerosols, clouds, and precipitation in the North Atlantic trades observed during the Barbados aerosol cloud experiment – Part 1: Distributions and variability

Directory of Open Access Journals (Sweden)

E. Jung

2016-07-01

Full Text Available Shallow marine cumulus clouds are by far the most frequently observed cloud type over the Earth's oceans; but they are poorly understood and have not been investigated as extensively as stratocumulus clouds. This study describes and discusses the properties and variations of aerosol, cloud, and precipitation associated with shallow marine cumulus clouds observed in the North Atlantic trades during a field campaign (Barbados Aerosol Cloud Experiment- BACEX, March–April 2010, which took place off Barbados where African dust periodically affects the region. The principal observing platform was the Center for Interdisciplinary Remotely Piloted Aircraft Studies (CIRPAS Twin Otter (TO research aircraft, which was equipped with standard meteorological instruments, a zenith pointing cloud radar and probes that measured aerosol, cloud, and precipitation characteristics.The temporal variation and vertical distribution of aerosols observed from the 15 flights, which included the most intense African dust event during all of 2010 in Barbados, showed a wide range of aerosol conditions. During dusty periods, aerosol concentrations increased substantially in the size range between 0.5 and 10 µm (diameter, particles that are large enough to be effective giant cloud condensation nuclei (CCN. The 10-day back trajectories showed three distinct air masses with distinct vertical structures associated with air masses originating in the Atlantic (typical maritime air mass with relatively low aerosol concentrations in the marine boundary layer, Africa (Saharan air layer, and mid-latitudes (continental pollution plumes. Despite the large differences in the total mass loading and the origin of the aerosols, the overall shapes of the aerosol particle size distributions were consistent, with the exception of the transition period.The TO was able to sample many clouds at various phases of growth. Maximum cloud depth observed was less than ∼ 3 km, while most

Cloud management and security

CERN Document Server

Abbadi, Imad M

2014-01-01

Written by an expert with over 15 years' experience in the field, this book establishes the foundations of Cloud computing, building an in-depth and diverse understanding of the technologies behind Cloud computing. In this book, the author begins with an introduction to Cloud computing, presenting fundamental concepts such as analyzing Cloud definitions, Cloud evolution, Cloud services, Cloud deployment types and highlighting the main challenges. Following on from the introduction, the book is divided into three parts: Cloud management, Cloud security, and practical examples. Part one presents the main components constituting the Cloud and federated Cloud infrastructure(e.g., interactions and deployment), discusses management platforms (resources and services), identifies and analyzes the main properties of the Cloud infrastructure, and presents Cloud automated management services: virtual and application resource management services. Part two analyzes the problem of establishing trustworthy Cloud, discuss...

Cloud Computing Technologies in Writing Class: Factors Influencing Students’ Learning Experience

Directory of Open Access Journals (Sweden)

Jenny WANG

2017-07-01

Full Text Available The proposed interactive online group within the cloud computing technologies as a main contribution of this paper provides easy and simple access to the cloud-based Software as a Service (SaaS system and delivers effective educational tools for students and teacher on after-class group writing assignment activities. Therefore, this study addresses the implementation of the most commonly used cloud applications, Google Docs, in a higher education course. The learning environment integrated Google Docs that students are using to develop and deploy writing assignments in between classes has been subjected to learning experience assessment. Using the questionnaire as an instrument to study participants (n=28, the system has provided an effective learning environment in between classes for the students and the instructor to stay connected. Factors influencing students’ learning experience based on cloud applications include frequency of interaction online and students’ technology experience. Suggestions to cope with challenges regarding the use of them in higher education including the technical issues are also presented. Educators are therefore encouraged to embrace cloud computing technologies as they design the course curriculum in hoping to effectively enrich students’ learning.

Satellite-Surface Perspectives of Air Quality and Aerosol-Cloud Effects on the Environment: An Overview of 7-SEAS BASELInE

Science.gov (United States)

Tsay, Si-Chee; Maring, Hal B.; Lin, Neng-Huei; Buntoung, Sumaman; Chantara, Somporn; Chuang, Hsiao-Chi; Gabriel, Philip M.; Goodloe, Colby S.; Holben, Brent N.; Hsiao, Ta-Chih;

The McNair Scholars Program as an Agent of Socialization in the Doctoral Experience

Science.gov (United States)

Gittens, Cheryl Bailey

2013-01-01

Interventions such as the Ronald E. McNair Post-Baccalaureate Achievement Program (McNair Scholars Program) are among the national strategies for promoting doctoral degree attainment amongst first-generation college students from low socioeconomic backgrounds or groups underrepresented in graduate education. This study aimed to understand how…

Patient-Centered e-Health Record over the Cloud.

Science.gov (United States)

Koumaditis, Konstantinos; Themistocleous, Marinos; Vassilacopoulos, George; Prentza, Andrianna; Kyriazis, Dimosthenis; Malamateniou, Flora; Maglaveras, Nicos; Chouvarda, Ioanna; Mourouzis, Alexandros

2014-01-01

The purpose of this paper is to introduce the Patient-Centered e-Health (PCEH) conceptual aspects alongside a multidisciplinary project that combines state-of-the-art technologies like cloud computing. The project, by combining several aspects of PCEH, such as: (a) electronic Personal Healthcare Record (e-PHR), (b) homecare telemedicine technologies, (c) e-prescribing, e-referral, e-learning, with advanced technologies like cloud computing and Service Oriented Architecture (SOA), will lead to an innovative integrated e-health platform of many benefits to the society, the economy, the industry, and the research community. To achieve this, a consortium of experts, both from industry (two companies, one hospital and one healthcare organization) and academia (three universities), was set to investigate, analyse, design, build and test the new platform. This paper provides insights to the PCEH concept and to the current stage of the project. In doing so, we aim at increasing the awareness of this important endeavor and sharing the lessons learned so far throughout our work.

Cloud4Psi: cloud computing for 3D protein structure similarity searching.

Science.gov (United States)

Mrozek, Dariusz; Małysiak-Mrozek, Bożena; Kłapciński, Artur

2014-10-01

Popular methods for 3D protein structure similarity searching, especially those that generate high-quality alignments such as Combinatorial Extension (CE) and Flexible structure Alignment by Chaining Aligned fragment pairs allowing Twists (FATCAT) are still time consuming. As a consequence, performing similarity searching against large repositories of structural data requires increased computational resources that are not always available. Cloud computing provides huge amounts of computational power that can be provisioned on a pay-as-you-go basis. We have developed the cloud-based system that allows scaling of the similarity searching process vertically and horizontally. Cloud4Psi (Cloud for Protein Similarity) was tested in the Microsoft Azure cloud environment and provided good, almost linearly proportional acceleration when scaled out onto many computational units. Cloud4Psi is available as Software as a Service for testing purposes at: http://cloud4psi.cloudapp.net/. For source code and software availability, please visit the Cloud4Psi project home page at http://zti.polsl.pl/dmrozek/science/cloud4psi.htm. © The Author 2014. Published by Oxford University Press.

e-Health Cloud: Opportunities and Challenges

Directory of Open Access Journals (Sweden)

Jameela Al-Jaroodi

2012-07-01

Full Text Available As the costs of healthcare services rise and healthcare professionals are becoming scarce and hard to find, it is imminent that healthcare organizations consider adopting health information technology (HIT systems. HIT allows health organizations to streamline many of their processes and provide services in a more efficient and cost-effective manner. The latest technological trends such as Cloud Computing (CC provide a strong infrastructure and offer a true enabler for HIT services over the Internet. This can be achieved on a pay-as-you-use model of the “e-Health Cloud” to help the healthcare industry cope with current and future demands yet keeping their costs to a minimum. Despite its great potential, HIT as a CC model has not been addressed extensively in the literature. There are no apparent frameworks which clearly encompass all viable schemes and interrelationships between HIT and CC. Therefore, analyzing and comparing the effectiveness of such schemes is important. In this paper we introduce the concept of “e-Health Cloud” highlighting many of its constituents and proposing building an e-health environment and elucidating many of the challenges confronting the success of the e-Health Cloud. We will also discuss different possible solutions to address challenges such as security and privacy.

Cloud Computing E-Communication Services in the University Environment

Science.gov (United States)

Babin, Ron; Halilovic, Branka

2017-01-01

The use of cloud computing services has grown dramatically in post-secondary institutions in the last decade. In particular, universities have been attracted to the low-cost and flexibility of acquiring cloud software services from Google, Microsoft and others, to implement e-mail, calendar and document management and other basic office software.…

77 FR 29871 - Establishment of Class E Airspace; Red Cloud, NE

Science.gov (United States)

2012-05-21

...-0426; Airspace Docket No. 11-ACE-7] Establishment of Class E Airspace; Red Cloud, NE AGENCY: Federal... at Red Cloud, NE. Controlled airspace is necessary to accommodate new Area Navigation (RNAV) Standard Instrument Approach Procedures at Red Cloud Municipal Airport. The FAA is taking this action to enhance the...

INTERNATIONAL EXPERIENCE OF CLOUD ORIENTED LEARNING ENVIRONMENT DESIGN IN SECONDARY SCHOOLS

Directory of Open Access Journals (Sweden)

Svitlana G. Lytvynova

2014-06-01

Full Text Available The article highlights the foreign experience of designing of cloud oriented learning environments (COLE in general secondary education. The projects in Russia, Germany, Czech Republic, Australia, China, Israel, Africa, Singapore, Brazil, Egypt, Colombia and the United States are analyzed. The analysis of completed projects found out the common problems of implementing of cloud oriented learning environments (security of personal data, technical problems of integration of cloud environments with existing systems, and productivity of cloud services and their advantages for secondary education (mobility of participants, volumetric cloud data storage, universally accessibility, regular software updating, ease of use, etc..

Retrieval of Boundary Layer 3D Cloud Properties Using Scanning Cloud Radar and 3D Radiative Transfer

Energy Technology Data Exchange (ETDEWEB)

Marchand, Roger [Univ. of Washington, Seattle, WA (United States)

2017-01-24

Retrievals of cloud optical and microphysical properties for boundary layer clouds, including those widely used by ASR investigators, frequently assume that clouds are sufficiently horizontally homogeneous that scattering and absorption (at all wavelengths) can be treated using one dimensional (1D) radiative transfer, and that differences in the field-of-view of different sensors are unimportant. Unfortunately, most boundary layer clouds are far from horizontally homogeneous, and numerous theoretical and observational studies show that the assumption of horizontal homogeneity leads to significant errors. The introduction of scanning cloud and precipitation radars at the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) program sites presents opportunities to move beyond the horizontally homogeneous assumption. The primary objective of this project was to develop a 3D retrieval for warm-phase (liquid only) boundary layer cloud microphysical properties, and to assess errors in current 1D (non-scanning) approaches. Specific research activities also involved examination of the diurnal cycle of hydrometeors as viewed by ARM cloud radar, and continued assessment of precipitation impacts on retrievals of cloud liquid water path using passive microwaves.

ARM Cloud-Aerosol-Precipitation Experiment (ACAPEX) Field Campaign Report

Energy Technology Data Exchange (ETDEWEB)

Leung, L Ruby [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

2016-03-01

The U.S. Department of Energy (DOE)’s Atmospheric Radiation Measurement (ARM) Climate Research Facility’s ARM Cloud-Aerosol-Precipitation Experiment (ACAPEX) field campaign contributes to CalWater 2015, a multi-agency field campaign that aims to improve understanding of atmospheric rivers and aerosol sources and transport that influence cloud and precipitation processes. The ultimate goal is to reduce uncertainties in weather predictions and climate projections of droughts and floods in California. With the DOE G-1 aircraft and ARM Mobile Facility 2 (AMF2) well equipped for making aerosol and cloud measurements, ACAPEX focuses specifically on understanding how aerosols from local pollution and long-range transport affect the amount and phase of precipitation associated with atmospheric rivers. ACAPEX took place between January 12, 2015 and March 8, 2015 as part of CalWater 2015, which included four aircraft (DOE G-1, National Oceanic and Atmospheric Administration [NOAA] G-IV and P-3, and National Aeronautics and Space Administration [NASA] ER-2), the NOAA research ship Ron Brown, carrying onboard the AMF2, National Science Foundation (NSF)-sponsored aerosol and precipitation measurements at Bodega Bay, and the California Department of Water Resources extreme precipitation network.

Grid Site Testing for ATLAS with HammerCloud

CERN Document Server

Elmsheuser, J; The ATLAS collaboration; Legger, F; Medrano LLamas, R; Sciacca, G; van der Ster, D

2014-01-01

With the exponential growth of LHC (Large Hadron Collider) data in 2012, distributed computing has become the established way to analyze collider data. The ATLAS grid infrastructure includes more than 130 sites worldwide, ranging from large national computing centers to smaller university clusters. HammerCloud was previously introduced with the goals of enabling VO- and site-administrators to run validation tests of the site and software infrastructure in an automated or on-demand manner. The HammerCloud infrastructure has been constantly improved to support the addition of new test work-flows. These new work-flows comprise e.g. tests of the ATLAS nightly build system, ATLAS MC production system, XRootD federation FAX and new site stress test work-flows. We report on the development, optimization and results of the various components in the HammerCloud framework.

Grid Site Testing for ATLAS with HammerCloud

CERN Document Server

Elmsheuser, J; The ATLAS collaboration; Legger, F; Medrano LLamas, R; Sciacca, G; van der Ster, D

2013-01-01

With the exponential growth of LHC (Large Hadron Collider) data in 2012, distributed computing has become the established way to analyze collider data. The ATLAS grid infrastructure includes more than 130 sites worldwide, ranging from large national computing centers to smaller university clusters. HammerCloud was previously introduced with the goals of enabling VO- and site-administrators to run validation tests of the site and software infrastructure in an automated or on-demand manner. The HammerCloud infrastructure has been constantly improved to support the addition of new test work-flows. These new work-flows comprise e.g. tests of the ATLAS nightly build system, ATLAS MC production system, XRootD federation FAX and new site stress test work-flows. We report on the development, optimization and results of the various components in the HammerCloud framework.

3D Cloud Radiative Effects on Polarized Reflectances

Science.gov (United States)

Cornet, C.; Matar, C.; C-Labonnote, L.; Szczap, F.; Waquet, F.; Parol, F.; Riedi, J.

2017-12-01

As recognized in the last IPCC report, clouds have a major importance in the climate budget and need to be better characterized. Remote sensing observations are a way to obtain either global observations of cloud from satellites or a very fine description of clouds from airborne measurements. An increasing numbers of radiometers plan to measure polarized reflectances in addition to total reflectances, since this information is very helpful to obtain aerosol or cloud properties. In a near future, for example, the Multi-viewing, Multi-channel, Multi-polarization Imager (3MI) will be part the EPS-SG Eumetsat-ESA mission. It will achieve multi-angular polarimetric measurements from visible to shortwave infrared wavelengths. An airborne prototype, OSIRIS (Observing System Including Polarization in the Solar Infrared Spectrum), is also presently developed at the Laboratoire d'Optique Atmospherique and had already participated to several measurements campaigns. In order to analyze suitably the measured signal, it it necessary to have realistic and accurate models able to simulate polarized reflectances. The 3DCLOUD model (Szczap et al., 2014) was used to generate three-dimensional synthetic cloud and the 3D radiative transfer model, 3DMCPOL (Cornet et al., 2010) to compute realistic polarized reflectances. From these simulations, we investigate the effects of 3D cloud structures and heterogeneity on the polarized angular signature often used to retrieve cloud or aerosol properties. We show that 3D effects are weak for flat clouds but become quite significant for fractional clouds above ocean. The 3D effects are quite different according to the observation scale. For the airborne scale (few tens of meter), solar illumination effects can lead to polarized cloud reflectance values higher than the saturation limit predicted by the homogeneous cloud assumption. In the cloud gaps, corresponding to shadowed areas of the total reflectances, polarized signal can also be enhanced

McUniversities Revisited: A Comparison of University and McDonald's Casual Employee Experiences in Australia

Science.gov (United States)

Nadolny, Andrew; Ryan, Suzanne

2015-01-01

The McDonaldization of higher education refers to the transformation of universities from knowledge generators to rational service organizations or "McUniversities". This is reflected in the growing dependence on a casualized academic workforce. The article explores the extent to which the McDonaldization thesis applies to universities…

Flex-prints for the Mu3e experiment

Energy Technology Data Exchange (ETDEWEB)

Dittmeier, Sebastian [Physikalisches Institut, Universitaet Heidelberg (Germany); Collaboration: Mu3e-Collaboration

2016-07-01

Mu3e is a novel experiment dedicated to the search for the charged lepton flavor violating decay μ{sup +} → e{sup +}e{sup -}e{sup +} with a targeted sensitivity of a branching ratio (BR) down to 10{sup -16}. Within the standard model of particle physics this process is extremely suppressed to BR<10{sup -54}. Thus, any observation would be a clear sign for new physics beyond the standard model. The Mu3e detector consists of a silicon pixel tracking detector using the novel HV-MAPS (High Voltage Monolithic Active Pixel Sensor) technology to measure the momentum of the decay products, and scintillating fibres and tiles for precise timing. The pixel sensors are thinned to 50 μ m to achieve a material budget of about 0.1% radiation length per tracking layer. The pixel sensors are powered and connected to readout frontend boards using custom designed flex-prints, which are low material interconnects with a high signal density. We present studies of high speed data transmission up to 3.2 Gb/s over flex-print prototypes produced in-house. The design of the flex-prints for the Mu3e detector will be discussed. A 3-layer design including power, ground and slow control distribution, as well as 9 1.25 Gb/s data transmission lines for the readout of the pixel sensors is foreseen.

Intercomparison of model simulations of mixed-phase clouds observed during the ARM Mixed-Phase Arctic Cloud Experiment. Part II: Multi-layered cloud

Energy Technology Data Exchange (ETDEWEB)

Morrison, H; McCoy, R B; Klein, S A; Xie, S; Luo, Y; Avramov, A; Chen, M; Cole, J; Falk, M; Foster, M; Genio, A D; Harrington, J; Hoose, C; Khairoutdinov, M; Larson, V; Liu, X; McFarquhar, G; Poellot, M; Shipway, B; Shupe, M; Sud, Y; Turner, D; Veron, D; Walker, G; Wang, Z; Wolf, A; Xu, K; Yang, F; Zhang, G

2008-02-27

Results are presented from an intercomparison of single-column and cloud-resolving model simulations of a deep, multi-layered, mixed-phase cloud system observed during the ARM Mixed-Phase Arctic Cloud Experiment. This cloud system was associated with strong surface turbulent sensible and latent heat fluxes as cold air flowed over the open Arctic Ocean, combined with a low pressure system that supplied moisture at mid-level. The simulations, performed by 13 single-column and 4 cloud-resolving models, generally overestimate the liquid water path and strongly underestimate the ice water path, although there is a large spread among the models. This finding is in contrast with results for the single-layer, low-level mixed-phase stratocumulus case in Part I of this study, as well as previous studies of shallow mixed-phase Arctic clouds, that showed an underprediction of liquid water path. The overestimate of liquid water path and underestimate of ice water path occur primarily when deeper mixed-phase clouds extending into the mid-troposphere were observed. These results suggest important differences in the ability of models to simulate Arctic mixed-phase clouds that are deep and multi-layered versus shallow and single-layered. In general, models with a more sophisticated, two-moment treatment of the cloud microphysics produce a somewhat smaller liquid water path that is closer to observations. The cloud-resolving models tend to produce a larger cloud fraction than the single-column models. The liquid water path and especially the cloud fraction have a large impact on the cloud radiative forcing at the surface, which is dominated by the longwave flux for this case.

Effect of acetaminophen on osteoblastic differentiation and migration of MC3T3-E1 cells.

Science.gov (United States)

Nakatsu, Yoshihiro; Nakagawa, Fumio; Higashi, Sen; Ohsumi, Tomoko; Shiiba, Shunji; Watanabe, Seiji; Takeuchi, Hiroshi

2018-02-01

N-acetyl-p-aminophenol (APAP, acetaminophen, paracetamol) is a widely used analgesic/antipyretic with weak inhibitory effects on cyclooxygenase (COX) compared to non-steroidal anti-inflammatory drugs (NSAIDs). The mechanism of action of APAP is mediated by its metabolite that activates transient receptor potential channels, including transient receptor potential vanilloid 1 (TRPV1) and TRP ankyrin 1 (TRPA1) or the cannabinoid receptor type 1 (CB1). However, the exact molecular mechanism and target underlying the cellular actions of APAP remain unclear. Therefore, we investigated the effect of APAP on osteoblastic differentiation and cell migration, with a particular focus on TRP channels and CB1. Effects of APAP on osteoblastic differentiation and cell migration of MC3T3-E1, a mouse pre-osteoblast cell line, were assessed by the increase in alkaline phosphatase (ALP) activity, and both wound-healing and transwell-migration assays, respectively. APAP dose-dependently inhibited osteoblastic differentiation, which was well correlated with the effects on COX activity compared with other NSAIDs. In contrast, cell migration was promoted by APAP, and this effect was not correlated with COX inhibition. None of the agonists or antagonists of TRP channels and the CB receptor affected the APAP-induced cell migration, while the effect of APAP on cell migration was abolished by down-regulating TRPV4 gene expression. APAP inhibited osteoblastic differentiation via COX inactivation while it promoted cell migration independently of previously known targets such as COX, TRPV1, TRPA1 channels, and CB receptors, but through the mechanism involving TRPV4. APAP may have still unidentified molecular targets that modify cellular functions. Copyright © 2017 Institute of Pharmacology, Polish Academy of Sciences. Published by Elsevier B.V. All rights reserved.

The Einstein formula: E0=mc2. 'Isn't the Lord laughing?'

International Nuclear Information System (INIS)

Okun, L B

2008-01-01

The article traces the way Einstein formulated the relation between energy and mass in his work from 1905 to 1955. Einstein emphasized quite often that the mass m of a body is equivalent to its rest energy E 0 . At the same time, he frequently resorted to the less clear-cut statement of the equivalence of energy and mass. As a result, Einstein's formula E 0 =mc 2 still remains much less known than its popular form, E=mc 2 , in which E is the total energy equal to the sum of the rest energy and the kinetic energy of a freely moving body. One of the consequences of this is the widespread fallacy that the mass of a body increases when its velocity increases and even that this is an experimental fact. As wrote the playwright A N Ostrovsky 'Something must exist for people, something so austere, so lofty, so sacrosanct that it would make profaning it unthinkable.' (from the history of physics)

Microphysical parameters of cirrus clouds using lidar at a tropical station, Gadanki, Tirupati (13.5° N, 79.2°E), India

Science.gov (United States)

Satyanarayana, M.; Radhakrishnan, S.-R.; Krishnakumar, V.; Mahadevan Pillai, V. P.; Raghunath, K.

2008-12-01

Cirrus clouds have been identified as one of the most uncertain component in the atmospheric research. It is known that cirrus clouds modulate the earth's climate through direct and indirect modification of radiation. The role of cirrus clouds depends mainly on their microphysical properties. To understand cirrus clouds better, we must observe and characterize their properties. In-situ observation of such clouds is a challenging experiment, as the clouds are located at high altitudes. Active remote sensing method based on lidar can detect high and thin cirrus clouds with good spatial and temporal resolution. We present the result obtained on the microphysical properties of the cirrus clouds at two Tropical stations namely Gadhanki, Tirupati (13.50 N, 79.20 E), India and Trivandrum (13.50 N, 770 E) Kerala, India from the ground based pulsed Nd: YAG lidar systems installed at the stations. A variant of the widely used Klett's lidar inversion method with range dependent scattering ratio is used for the present study for the retrieval of aerosol extinction and microphysical parameters of cirrus cloud.

E-HEALTH CLOUD FOR NIGERIAN TEACHING HOSPITALS

African Journals Online (AJOL)

Administrator

massive data storage and availability of resources on demand. With well over ... this issue by proposing a Cloud computing infrastructure for e-Health solutions in Nigeria. This will ... security and privacy as each application has its own virtual.

CloudSat-Constrained Cloud Ice Water Path and Cloud Top Height Retrievals from MHS 157 and 183.3 GHz Radiances

Science.gov (United States)

Gong, J.; Wu, D. L.

2014-01-01

Ice water path (IWP) and cloud top height (ht) are two of the key variables in determining cloud radiative and thermodynamical properties in climate models. Large uncertainty remains among IWP measurements from satellite sensors, in large part due to the assumptions made for cloud microphysics in these retrievals. In this study, we develop a fast algorithm to retrieve IWP from the 157, 183.3+/-3 and 190.3 GHz radiances of the Microwave Humidity Sounder (MHS) such that the MHS cloud ice retrieval is consistent with CloudSat IWP measurements. This retrieval is obtained by constraining the empirical forward models between collocated and coincident measurements of CloudSat IWP and MHS cloud-induced radiance depression (Tcir) at these channels. The empirical forward model is represented by a lookup table (LUT) of Tcir-IWP relationships as a function of ht and the frequency channel.With ht simultaneously retrieved, the IWP is found to be more accurate. The useful range of the MHS IWP retrieval is between 0.5 and 10 kg/sq m, and agrees well with CloudSat in terms of the normalized probability density function (PDF). Compared to the empirical model, current operational radiative transfer models (RTMs) still have significant uncertainties in characterizing the observed Tcir-IWP relationships. Therefore, the empirical LUT method developed here remains an effective approach to retrieving ice cloud properties from the MHS-like microwave channels.

New simulation capabilities of electron clouds in ion beams with large tune depression

International Nuclear Information System (INIS)

Vay, J.L.; Furman, M.A.; Seidl, P.A.; Cohen, R.H.; Friedman, A.; Grote, D.P.; Kireeff-Covo, M.; Molvik, A.W.; Stoltz, P.H.; Veitzer, S.; Verboncoeur, J.P.

2006-01-01

The authors have developed a new, comprehensive set of simulation tools aimed at modeling the interaction of intense ion beams and electron clouds (e-clouds). The set contains the 3-D accelerator PIC code WARP and the 2-D ''slice'' e-cloud code POSINST, as well as a merger of the two, augmented by new modules for impact ionization and neutral gas generation. The new capability runs on workstations or parallel supercomputers and contains advanced features such as mesh refinement, disparate adaptive time stepping, and a new ''drift-Lorentz'' particle mover for tracking charged particles in magnetic fields using large time steps. It is being applied to the modeling of ion beams (1 MeV, 180 mA, K+) for heavy ion inertial fusion and warm dense matter studies, as they interact with electron clouds in the High-Current Experiment (HCX). They describe the capabilities and present recent simulation results with detailed comparisons against the HCX experiment, as well as their application (in a different regime) to the modeling of e-clouds in the Large Hadron Collider (LHC)

MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants.

Science.gov (United States)

Elshazly, Hatem; Souilmi, Yassine; Tonellato, Peter J; Wall, Dennis P; Abouelhoda, Mohamed

2017-01-20

Next Generation Genome sequencing techniques became affordable for massive sequencing efforts devoted to clinical characterization of human diseases. However, the cost of providing cloud-based data analysis of the mounting datasets remains a concerning bottleneck for providing cost-effective clinical services. To address this computational problem, it is important to optimize the variant analysis workflow and the used analysis tools to reduce the overall computational processing time, and concomitantly reduce the processing cost. Furthermore, it is important to capitalize on the use of the recent development in the cloud computing market, which have witnessed more providers competing in terms of products and prices. In this paper, we present a new package called MC-GenomeKey (Multi-Cloud GenomeKey) that efficiently executes the variant analysis workflow for detecting and annotating mutations using cloud resources from different commercial cloud providers. Our package supports Amazon, Google, and Azure clouds, as well as, any other cloud platform based on OpenStack. Our package allows different scenarios of execution with different levels of sophistication, up to the one where a workflow can be executed using a cluster whose nodes come from different clouds. MC-GenomeKey also supports scenarios to exploit the spot instance model of Amazon in combination with the use of other cloud platforms to provide significant cost reduction. To the best of our knowledge, this is the first solution that optimizes the execution of the workflow using computational resources from different cloud providers. MC-GenomeKey provides an efficient multicloud based solution to detect and annotate mutations. The package can run in different commercial cloud platforms, which enables the user to seize the best offers. The package also provides a reliable means to make use of the low-cost spot instance model of Amazon, as it provides an efficient solution to the sudden termination of spot

Columbia River Salmonid Outmigration: McNary Dam Passage and Enhanced Smolt Quality, 1984 Second Year Completion Report.

Energy Technology Data Exchange (ETDEWEB)

Schreck, Carl B.

1984-07-01

The effects of the McNary Dam transportation system on emigrating fall and spring chinook smolts were evaluated using physiological indices of stress (e.g., plasma cortisol, hepatic glycogen, leucocrit, interrenal cell nuclear diameter) and performance tests (e.g., saltwater challenge, secondary stress challenge, disease resistance). Controlled experiments were conducted in a hatchery environment to characterize the fishes' physiological responses to stress, and disease resistance to allow a basis for judging the nature of the stress experienced by smolts at McNary Dam. 55 figs., 3 tabs.

New experiment to investigate cosmic connection to clouds

CERN Multimedia

United Kingdom. Particle Physics and Astronomy Research Council

2006-01-01

"A novel experiment, known as CLOUD (Cosmics Leaving OUtdoor Droplets), begins taking its first data today with a prototype detector in a prticle beam at CERN, the world's largest laboratory for particle physics." (1,5 page)

McMYB10 regulates coloration via activating McF3'H and later structural genes in ever-red leaf crabapple.

Science.gov (United States)

Tian, Ji; Peng, Zhen; Zhang, Jie; Song, Tingting; Wan, Huihua; Zhang, Meiling; Yao, Yuncong

2015-09-01

The ever-red leaf trait, which is important for breeding ornamental and higher anthocyanin plants, rarely appears in Malus families, but little is known about the regulation of anthocyanin biosynthesis involved in the red leaves. In our study, HPLC analysis showed that the anthocyanin concentration in ever-red leaves, especially cyanidin, was significantly higher than that in evergreen leaves. The transcript level of McMYB10 was significantly correlated with anthocyanin synthesis between the 'Royalty' and evergreen leaf 'Flame' cultivars during leaf development. We also found the ever-red leaf colour cultivar 'Royalty' contained the known R6 : McMYB10 sequence, but was not in the evergreen leaf colour cultivar 'Flame', which have been reported in apple fruit. The distinction in promoter region maybe is the main reason why higher expression level of McMYB10 in red foliage crabapple cultivar. Furthermore, McMYB10 promoted anthocyanin biosynthesis in crabapple leaves and callus at low temperatures and during long-day treatments. Both heterologous expression in tobacco (Nicotiana tabacum) and Arabidopsis pap1 mutant, and homologous expression in crabapple and apple suggested that McMYB10 could promote anthocyanins synthesis and enhanced anthocyanin accumulation in plants. Interestingly, electrophoretic mobility shift assays, coupled with yeast one-hybrid analysis, revealed that McMYB10 positively regulates McF3'H via directly binding to AACCTAAC and TATCCAACC motifs in the promoter. To sum up, our results demonstrated that McMYB10 plays an important role in ever-red leaf coloration, by positively regulating McF3'H in crabapple. Therefore, our work provides new perspectives for ornamental fruit tree breeding. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

First Look at Results from the Metal Oxide Space Cloud (MOSC) Experiment

Science.gov (United States)

Caton, R. G.; Pedersen, T. R.; Parris, R. T.; Groves, K. M.; Bernhardt, P. A.; Cannon, P. S.

2013-12-01

During the moon down period from 28 April to 10 May 2013, the NASA Sounding Rocket Program successfully completed a series of two launches from the Kwajalein Atoll for the Air Force Research Laboratory's Metal Oxide Space Cloud (MOSC) experiment. Payloads on both Terrier Improved Orion rockets flown during the mission included two 5 kg of canisters of Samarium (Sm) powder in a thermite mix for immediate expulsion and vaporization and a two-frequency Coherent Electromagnetic Radio Tomography (CERTO) beacon provided by the Naval Research Laboratory. The launches were carefully timed for dusk releases of Sm vapor at preselected altitudes creating artificially generated layers lasting several hours. A host of ground sensors were deployed to fully probe and characterize the localized plasma cloud produced as a result of charge exchange with the background oxygen (Sm + O → SmO+ + e-). In addition to incoherent scatter probing of the ionization cloud with the ALTAIR radar, ground diagnostics included GPS and CERTO beacon receivers at five locations in the Marshall Islands. Researchers from QinetiQ and the UK MOD participated in the MOSC experiment with the addition of an HF transmitting system and an array of receivers distributed across multiple islands to examine the response of the HF propagation environment to the artificially generated layer. AFRL ground equipment included a pair of All-Sky Imagers, optical spectrographs, and two DPS-4D digisondes spaced ~200 km apart providing vertical and oblique soundings. As the experimental team continues to evaluate the data, this paper will present a first look at early results from the MOSC experiment. Data collected will be used to improve existing models and tailor future experiments targeted at demonstrating the ability to temporarily control the RF propagation environment through an on-demand modification of the ionosphere. Funding for the launch was provided by the DoD Space Test Program.

Automatic Generation of Structural Building Descriptions from 3D Point Cloud Scans

DEFF Research Database (Denmark)

Ochmann, Sebastian; Vock, Richard; Wessel, Raoul

2013-01-01

We present a new method for automatic semantic structuring of 3D point clouds representing buildings. In contrast to existing approaches which either target the outside appearance like the facade structure or rather low-level geometric structures, we focus on the building’s interior using indoor...... scans to derive high-level architectural entities like rooms and doors. Starting with a registered 3D point cloud, we probabilistically model the affiliation of each measured point to a certain room in the building. We solve the resulting clustering problem using an iterative algorithm that relies...... on the estimated visibilities between any two locations within the point cloud. With the segmentation into rooms at hand, we subsequently determine the locations and extents of doors between adjacent rooms. In our experiments, we demonstrate the feasibility of our method by applying it to synthetic as well...

Determination of ice water path in ice-over-water cloud systems using combined MODIS and AMSR-E measurements

Science.gov (United States)

Huang, Jianping; Minnis, Patrick; Lin, Bing; Yi, Yuhong; Fan, T.-F.; Sun-Mack, Sunny; Ayers, J. K.

2006-11-01

To provide more accurate ice cloud microphysical properties, the multi-layered cloud retrieval system (MCRS) is used to retrieve ice water path (IWP) in ice-over-water cloud systems globally over oceans using combined instrument data from Aqua. The liquid water path (LWP) of lower-layer water clouds is estimated from the Advanced Microwave Scanning Radiometer for EOS (AMSR-E) measurements. The properties of the upper-level ice clouds are then derived from Moderate Resolution Imaging Spectroradiometer (MODIS) measurements by matching simulated radiances from a two-cloud-layer radiative transfer model. The results show that the MCRS can significantly improve the accuracy and reduce the over-estimation of optical depth and IWP retrievals for ice-over-water cloud systems. The mean daytime ice cloud optical depth and IWP for overlapped ice-over-water clouds over oceans from Aqua are 7.6 and 146.4 gm-2, respectively, down from the initial single-layer retrievals of 17.3 and 322.3 gm-2. The mean IWP for actual single-layer clouds is 128.2 gm-2.

User requirements Massive Point Clouds for eSciences (WP1)

NARCIS (Netherlands)

Suijker, P.M.; Alkemade, I.; Kodde, M.P.; Nonhebel, A.E.

2014-01-01

This report is a milestone in work package 1 (WP1) of the project Massive point clouds for eSciences. In WP1 the basic functionalities needed for a new Point Cloud Spatial Database Management System are identified. This is achieved by (1) literature research, (2) discussions with the project

Experiment E89-044 on the Quasielastic ³He(e,e'p) Reaction at Jefferson Laboratory

Energy Technology Data Exchange (ETDEWEB)

Penel-Nottaris, Emilie [Univ. Joseph Fourier Grenoble (France)

2004-07-07

The Jefferson Lab Hall A E89-044 experiment has measured the ³He(e,e'p) reaction cross-sections. The extraction of the longitudinal and transverse response functions for the two-body break-up ³He(e,e'p)d reaction in parallel kinematics allows the study of the bound proton electromagnetic properties inside the ³He nucleus and the involved nuclear mechanisms beyond plane wave approximations.

AMF3 CloudSat Overpasses Field Campaign Report

Energy Technology Data Exchange (ETDEWEB)

Matrosov, Sergey [University of Colorado, Boulder; National Oceanic and Atmospheric Administration (NOAA), Boulder, CO (United States). Earth System Research Lab.; Hardin, Joseph [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); De Boer, Gijs [University of Colorado, Boulder; National Oceanic and Atmospheric Administration (NOAA), Boulder, CO (United States). Earth System Research Lab.; Shupe, Matthew [University of Colorado, Boulder; National Oceanic and Atmospheric Administration (NOAA), Boulder, CO (United States). Earth System Research Lab.; Maahn, Maximillian [National Oceanic and Atmospheric Administration (NOAA), Boulder, CO (United States). Earth System Research Lab.; Williams, Christopher [University of Colorado, Boulder; National Oceanic and Atmospheric Administration (NOAA), Boulder, CO (United States). Earth System Research Lab.

2017-10-15

Synergy between ground-based and satellite radar observations of clouds and precipitation is important for refining the algorithms to retrieve hydrometeor microphysical parameters, improvements in the retrieval accuracy, and better understanding the advantages and limitations of different retrieval approaches. The new dual-frequency (Ka- and W-band, 35 GHz and 94 GHz) fully polarimetric scanning U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Research Facility cloud radars (SACRs-2) are advanced sensors aimed to significantly enhance remote sensing capabilities (Kollias et al. 2016). One of these radars was deployed as part of the third ARM Mobile Facility (AMF3) at Oliktok Point, Alaska (70.495o N, 149.886oW). The National Aeronautics and Space Administration (NASA) CloudSat satellite, which is part of the polar-orbiting A-train satellite constellation, passes over the vicinity of the AMF3 location (typically within 0-7 km depending on a particular overpass) on a descending orbit every 16 days at approximately 13:21 UTC. The nadir pointing W-band CloudSat cloud profiling radar (CPR) provides vertical profiles of reflectivity that are then used for retrievals of hydrometeor parameters (Tanelli et al. 2008). The main objective of the AMF3 CloudSat overpasses intensive operating period (IOP) campaign was to collect approximately collocated in space and time radar data from the SACR-2 and the CloudSat CPR measurements for subsequent joint analysis of radar variables and microphysical retrievals of cloud and precipitation parameters. Providing the reference for the SACR-2 absolute calibration from the well-calibrated CloudSat CPR was another objective of this IOP. The IOP objectives were achieved by conducting seven special SACR-2 scans during the 10.5-min period centered at the exact time of the CloudSat overpass over the AMF3 (~1321 UTC) on six dates of the CloudSat overpasses during the three-month period allocated to this IOP. These six days

Efficient 3D Volume Reconstruction from a Point Cloud Using a Phase-Field Method

Directory of Open Access Journals (Sweden)

Darae Jeong

2018-01-01

Full Text Available We propose an explicit hybrid numerical method for the efficient 3D volume reconstruction from unorganized point clouds using a phase-field method. The proposed three-dimensional volume reconstruction algorithm is based on the 3D binary image segmentation method. First, we define a narrow band domain embedding the unorganized point cloud and an edge indicating function. Second, we define a good initial phase-field function which speeds up the computation significantly. Third, we use a recently developed explicit hybrid numerical method for solving the three-dimensional image segmentation model to obtain efficient volume reconstruction from point cloud data. In order to demonstrate the practical applicability of the proposed method, we perform various numerical experiments.

Description of premixing with the MC3D code including molten jet behavior modeling. Comparison with FARO experimental results

Energy Technology Data Exchange (ETDEWEB)

Berthoud, G.; Crecy, F. de; Meignen, R.; Valette, M. [CEA-G, DRN/DTP/SMTH, 17 rue des Martyrs, 38054 Grenoble Cedex 9 (France)

1998-01-01

The premixing phase of a molten fuel-coolant interaction is studied by the way of mechanistic multidimensional calculation. Beside water and steam, corium droplet flow and continuous corium jet flow are calculated independent. The 4-field MC3D code and a detailed hot jet fragmentation model are presented. MC3D calculations are compared to the FARO L14 experiment results and are found to give satisfactory results; heat transfer and jet fragmentation models are still to be improved to predict better final debris size values. (author)

On the Clouds: A New Way of Computing

Directory of Open Access Journals (Sweden)

Yan Han

2010-06-01

Full Text Available This article introduces cloud computing and discusses the author’s experience “on the clouds.” The author reviews cloud computing services and providers, then presents his experience of running multiple systems (e.g., integrated library systems, content management systems, and repository software. He evaluates costs, discusses advantages, and addresses some issues about cloud computing. Cloud computing fundamentally changes the ways institutions and companies manage their computing needs. Libraries can take advantage of cloud computing to start an IT project with low cost, to manage computing resources cost-effectively, and to explore new computing possibilities.

Automatic co-registration of 3D multi-sensor point clouds

Science.gov (United States)

Persad, Ravi Ancil; Armenakis, Costas

2017-08-01

We propose an approach for the automatic coarse alignment of 3D point clouds which have been acquired from various platforms. The method is based on 2D keypoint matching performed on height map images of the point clouds. Initially, a multi-scale wavelet keypoint detector is applied, followed by adaptive non-maxima suppression. A scale, rotation and translation-invariant descriptor is then computed for all keypoints. The descriptor is built using the log-polar mapping of Gabor filter derivatives in combination with the so-called Rapid Transform. In the final step, source and target height map keypoint correspondences are determined using a bi-directional nearest neighbour similarity check, together with a threshold-free modified-RANSAC. Experiments with urban and non-urban scenes are presented and results show scale errors ranging from 0.01 to 0.03, 3D rotation errors in the order of 0.2° to 0.3° and 3D translation errors from 0.09 m to 1.1 m.

Probabilistic programming in Python using PyMC3

Directory of Open Access Journals (Sweden)

John Salvatier

2016-04-01

Full Text Available Probabilistic programming allows for automatic Bayesian inference on user-defined probabilistic models. Recent advances in Markov chain Monte Carlo (MCMC sampling allow inference on increasingly complex models. This class of MCMC, known as Hamiltonian Monte Carlo, requires gradient information which is often not readily available. PyMC3 is a new open source probabilistic programming framework written in Python that uses Theano to compute gradients via automatic differentiation as well as compile probabilistic programs on-the-fly to C for increased speed. Contrary to other probabilistic programming languages, PyMC3 allows model specification directly in Python code. The lack of a domain specific language allows for great flexibility and direct interaction with the model. This paper is a tutorial-style introduction to this software package.

Importance of including ammonium sulfate ((NH42SO4 aerosols for ice cloud parameterization in GCMs

Directory of Open Access Journals (Sweden)

P. S. Bhattacharjee

2010-02-01

Full Text Available A common deficiency of many cloud-physics parameterizations including the NASA's microphysics of clouds with aerosol-cloud interactions (hereafter called McRAS-AC is that they simulate lesser (larger than the observed ice cloud particle number (size. A single column model (SCM of McRAS-AC physics of the GEOS4 Global Circulation Model (GCM together with an adiabatic parcel model (APM for ice-cloud nucleation (IN of aerosols were used to systematically examine the influence of introducing ammonium sulfate (NH42SO4 aerosols in McRAS-AC and its influence on the optical properties of both liquid and ice clouds. First an (NH42SO4 parameterization was included in the APM to assess its effect on clouds vis-à-vis that of the other aerosols. Subsequently, several evaluation tests were conducted over the ARM Southern Great Plain (SGP and thirteen other locations (sorted into pristine and polluted conditions distributed over marine and continental sites with the SCM. The statistics of the simulated cloud climatology were evaluated against the available ground and satellite data. The results showed that inclusion of (NH42SO4 into McRAS-AC of the SCM made a remarkable improvement in the simulated effective radius of ice cloud particulates. However, the corresponding ice-cloud optical thickness increased even more than the observed. This can be caused by lack of horizontal cloud advection not performed in the SCM. Adjusting the other tunable parameters such as precipitation efficiency can mitigate this deficiency. Inclusion of ice cloud particle splintering invoked empirically further reduced simulation biases. Overall, these changes make a substantial improvement in simulated cloud optical properties and cloud distribution particularly over the Intertropical Convergence Zone (ITCZ in the GCM.

Performing quantum computing experiments in the cloud

Science.gov (United States)

Devitt, Simon J.

2016-09-01

Quantum computing technology has reached a second renaissance in the past five years. Increased interest from both the private and public sector combined with extraordinary theoretical and experimental progress has solidified this technology as a major advancement in the 21st century. As anticipated my many, some of the first realizations of quantum computing technology has occured over the cloud, with users logging onto dedicated hardware over the classical internet. Recently, IBM has released the Quantum Experience, which allows users to access a five-qubit quantum processor. In this paper we take advantage of this online availability of actual quantum hardware and present four quantum information experiments. We utilize the IBM chip to realize protocols in quantum error correction, quantum arithmetic, quantum graph theory, and fault-tolerant quantum computation by accessing the device remotely through the cloud. While the results are subject to significant noise, the correct results are returned from the chip. This demonstrates the power of experimental groups opening up their technology to a wider audience and will hopefully allow for the next stage of development in quantum information technology.

Traf2 interacts with Smad4 and regulates BMP signaling pathway in MC3T3-E1 osteoblasts

International Nuclear Information System (INIS)

Shimada, Koichi; Ikeda, Kyoko; Ito, Koichi

2009-01-01

Bone morphogenetic proteins (BMPs) play important roles in osteoblast differentiation and maturation. In mammals, the BMP-induced receptor-regulated Smads form complexes with Smad4. These complexes translocate and accumulate in the nucleus, where they regulate the transcription of various target genes. However, the function of Smad4 remains unclear. We performed a yeast two-hybrid screen using Smad4 as bait and a cDNA library derived from bone marrow, to indentify the proteins interacting with Smad4. cDNA clones for Tumor necrosis factor (TNF) receptor-associated factor 2 (Traf2) were identified, and the interaction between the endogenous proteins was confirmed in the mouse osteoblast cell line MC3T3-E1. To investigate the function of Traf2, we silenced it with siRNA. The level of BMP-2 protein in the medium, the expression levels of the Bmp2 gene and BMP-induced transcription factor genes, including Runx2, Dlx5, Msx2, and Sp7, and the phosphorylated-Smad1 protein level were increased in cells transfected with Traf2 siRNA. The nuclear accumulation of Smad1 increased with TNF-α stimulation for 30 min at Traf2 silencing. These results suggest that the TNF-α-stimulated nuclear accumulation of Smad1 may be dependent on Traf2. Thus, the interaction between Traf2 and Smad4 may play a role in the cross-talk between TNF-α and BMP signaling pathways.

The corrosion and biological behaviour of titanium alloys in the presence of human lymphoid cells and MC3T3-E1 osteoblasts

International Nuclear Information System (INIS)

Zhang Yumei; Zhao Yimin; Chai Feng; Hildebrand, Hartmut F; Hornez, Jean-Christophe; Li, Chang Liang; Traisnel, Michel

2009-01-01

Corrosion behaviour of biomedical alloys is generally determined in mineral electrolytes: unbuffered NaCl 0.9% (pH 7.4) or artificial saliva (pH 6.8). The assays with exclusive utilization of these electrolytes are of low relevance for the biological condition, to which the alloys will be exposed once implanted in the human organism. As an approach to the biological situation regarding the interaction of proteins, electrolytes and metals, we added the RPMI cell culture medium containing foetal calf serum as a biological electrolyte (pH 7.0). The analysis of corrosion behaviour was also performed in the presence of human lymphoid cells (CEM). The rest potential (E r ) and the global polarization were determined on cp-Ti, micro-arc oxidized cp-Ti (MAO-Ti), four different Ti-alloys (Ti6Al4V, Ti12Zr, Ti(AlMoZr), Ti(NbTaZr)) and 316L stainless steel. The 316L exhibited an appropriate E r and a good passive current density (I p ), but a high corrosion potential (E c ) and a very low breakdown potential (E b ) in all electrolytes. All Ti-alloys exhibited a much better electrochemical behaviour: better E r and E c and very high E b . No significant differences of the above parameters existed between the Ti-alloys, except for Zr-containing alloys that showed better corrosion behaviour. A remarkable difference, however, was stated with respect to the electrolytes. NaCl 0.9% induced strong variations between the Ti-alloys. More homogeneous results were obtained with artificial saliva and RPMI medium, which induced a favourable E c and an increased I p . The presence of cells further decreased these values. The unbuffered NaCl solution seems to be less appropriate for the analysis of corrosion of metals. Additional in vitro biological assessments with CEM cell suspensions and MC3T3-E1 osteoblasts confirmed the advantages of the Ti(AlMoZr) and Ti(NbTaZr) alloys with an improved cell proliferation and vitality rate.

Obama, McCain e as “Não-Questões”: o Doméstico e o Internacional

Directory of Open Access Journals (Sweden)

Cristina Soreanu Pecequilo

2008-07-01

Full Text Available

O artigo trata da eleição presidencial

norte-americana e da possibilidade de continuidade

e mudança a partir dos candidatos Barack Obama e

John McCain.

Zero-gravity cloud physics laboratory: Experiment program definition and preliminary laboratory concept studies

Science.gov (United States)

Eaton, L. R.; Greco, E. V.

1973-01-01

The experiment program definition and preliminary laboratory concept studies on the zero G cloud physics laboratory are reported. This program involves the definition and development of an atmospheric cloud physics laboratory and the selection and delineations of a set of candidate experiments that must utilize the unique environment of zero gravity or near zero gravity.

New simulation capabilities of electron clouds in ion beams with large tune depression

International Nuclear Information System (INIS)

Vay, J.-L.; Furman, M.A.; Seidl, P.A.

2007-01-01

We have developed a new, comprehensive set of simulation tools aimed at modeling the interaction of intense ion beams and electron clouds (e-clouds). The set contains the 3-D accelerator PIC code WARP and the 2-D 'slice' e-cloud code POSINST [M. Furman, this workshop, paper TUAX05], as well as a merger of the two, augmented by new modules for impact ionization and neutral gas generation. The new capability runs on workstations or parallel supercomputers and contains advanced features such as mesh refinement, disparate adaptive time stepping, and a new 'drift-Lorentz' particle mover for tracking charged particles in magnetic fields using large time steps. It is being applied to the modeling of ion beams (1 MeV, 180 mA, K+) for heavy ion inertial fusion and warm dense matter studies, as they interact with electron clouds in the High-Current Experiment (HCX) [experimental results discussed by A. Molvik, this workshop, paper THAW02]. We describe the capabilities and present recent simulation results with detailed comparisons against the HCX experiment, as well as their application (in a different regime) to the modeling of e-clouds in the Large Hadron Collider (LHC). (author)

New simulation capabilities of electron clouds in ion beams with large tune depression

International Nuclear Information System (INIS)

Lawrence Livermore National Laboratory

2006-01-01

We have developed a new, comprehensive set of simulation tools aimed at modeling the interaction of intense ion beams and electron clouds (e-clouds). The set contains the 3-D accelerator PIC code WARP and the 2-D ''slice'' e-cloud code POSINST [M. Furman, this workshop, paper TUAX05], as well as a merger of the two, augmented by new modules for impact ionization and neutral gas generation. The new capability runs on workstations or parallel supercomputers and contains advanced features such as mesh refinement, disparate adaptive time stepping, and a new ''drift-Lorentz'' particle mover for tracking charged particles in magnetic fields using large time steps. It is being applied to the modeling of ion beams (1 MeV, 180 mA, K+) for heavy ion inertial fusion and warm dense matter studies, as they interact with electron clouds in the High-Current Experiment (HCX) [experimental results discussed by A. Molvik, this workshop, paper THAW02]. We describe the capabilities and present recent simulation results with detailed comparisons against the HCX experiment, as well as their application (in a different regime) to the modeling of e-clouds in the Large Hadron Collider (LHC)

3D Aerosol-Cloud Radiative Interaction Observed in Collocated MODIS and ASTER Images of Cumulus Cloud Fields

Science.gov (United States)

Wen, Guoyong; Marshak, Alexander; Cahalan, Robert F.; Remer, Lorraine A.; Kleidman, Richard G.

2007-01-01

3D aerosol-cloud interaction is examined by analyzing two images containing cumulus clouds in biomass burning regions in Brazil. The research consists of two parts. The first part focuses on identifying 3D clo ud impacts on the reflectance of pixel selected for the MODIS aerosol retrieval based purely on observations. The second part of the resea rch combines the observations with radiative transfer computations to identify key parameters in 3D aerosol-cloud interaction. We found that 3D cloud-induced enhancement depends on optical properties of nearb y clouds as well as wavelength. The enhancement is too large to be ig nored. Associated biased error in 1D aerosol optical thickness retrie val ranges from 50% to 140% depending on wavelength and optical prope rties of nearby clouds as well as aerosol optical thickness. We caution the community to be prudent when applying 1D approximations in comp uting solar radiation in dear regions adjacent to clouds or when usin g traditional retrieved aerosol optical thickness in aerosol indirect effect research.

Overview of MPLNET Version 3 Cloud Detection

Science.gov (United States)

Lewis, Jasper R.; Campbell, James; Welton, Ellsworth J.; Stewart, Sebastian A.; Haftings, Phillip

2016-01-01

The National Aeronautics and Space Administration Micro Pulse Lidar Network, version 3, cloud detection algorithm is described and differences relative to the previous version are highlighted. Clouds are identified from normalized level 1 signal profiles using two complementary methods. The first method considers vertical signal derivatives for detecting low-level clouds. The second method, which detects high-level clouds like cirrus, is based on signal uncertainties necessitated by the relatively low signal-to-noise ratio exhibited in the upper troposphere by eye-safe network instruments, especially during daytime. Furthermore, a multitemporal averaging scheme is used to improve cloud detection under conditions of a weak signal-to-noise ratio. Diurnal and seasonal cycles of cloud occurrence frequency based on one year of measurements at the Goddard Space Flight Center (Greenbelt, Maryland) site are compared for the new and previous versions. The largest differences, and perceived improvement, in detection occurs for high clouds (above 5 km, above MSL), which increase in occurrence by over 5%. There is also an increase in the detection of multilayered cloud profiles from 9% to 19%. Macrophysical properties and estimates of cloud optical depth are presented for a transparent cirrus dataset. However, the limit to which the cirrus cloud optical depth could be reliably estimated occurs between 0.5 and 0.8. A comparison using collocated CALIPSO measurements at the Goddard Space Flight Center and Singapore Micro Pulse Lidar Network (MPLNET) sites indicates improvements in cloud occurrence frequencies and layer heights.

Why does E=mc2 ? And why should we care?

CERN Document Server

Cox, Brian

2009-01-01

Professor Brian Cox and Professor Jeff Forshaw go on a journey to the frontier of 21st century science to consider the real meaning behind the iconic sequence of symbols that make up Einstein’s most famous equation, E=mc2. Breaking down the symbols themselves, they pose a series of questions: What is energy? What is mass? What has the speed of light got to do with energy and mass? In answering these questions, they take us to the site of one of the largest scientific experiments ever conducted. Lying beneath the city of Geneva, straddling the Franco-Swiss boarder, is a 27 km particle accelerator, known as the Large Hadron Collider. Using this gigantic machine-which can recreate conditions in the early Universe fractions of a second after the Big Bang-Cox and Forshaw will describe the current theory behind the origin of mass. Alongside questions of energy and mass, they will consider the third, and perhaps, most intriguing element of the equation: 'c' - or the speed of light. Why is it that the speed of ligh...

eWALL: An Open-Source Cloud-Based eHealth Platform for Creating Home Caring Environments for Older Adults Living with Chronic Diseases or Frailty

DEFF Research Database (Denmark)

Kyriazakos, Sofoklis; Mihovska, Albena; Prasad, Ramjee

2017-01-01

present eWALL, an innovative open-source eHealth platform that aims to address these challenges by means of an advanced cloud-based infrastructure. eWALL is designed in an innovative manner and achieved technical breakthroughs in eHealth platforms, while prioritizing user and market needs that are often...... abandoned and are the major reason for technically sound solutions that fail. We consider this as an opportunity and we aim to change the eHealth systems’ experience for older adults and break the barriers for the penetration of ICT solutions....

Assessment of the Performance of the Chilbolton 3-GHz Advanced Meteorological Radar for Cloud-Top-Height Retrieval.

Science.gov (United States)

Naud, C. M.; Muller, J.-P.; Slack, E. C.; Wrench, C. L.; Clothiaux, E. E.

2005-06-01

The Chilbolton 3-GHz Advanced Meteorological Radar (CAMRa), which is mounted on a fully steerable 25-m dish, can provide three-dimensional information on the presence of hydrometeors. The potential for this radar to make useful measurements of low-altitude liquid water cloud structure is investigated. To assess the cloud-height assignment capabilities of the 3-GHz radar, low-level cloud-top heights were retrieved from CAMRa measurements made between May and July 2003 and were compared with cloud-top heights retrieved from a vertically pointing 94-GHz radar that operates alongside CAMRa. The average difference between the 94- and 3-GHz radar-derived cloud-top heights is shown to be -0.1 ± 0.4 km. To assess the capability of 3-GHz radar scans to be used for satellite-derived cloud-top-height validation, multiangle imaging spectroradiometer (MISR) cloud-top heights were compared with both 94- and 3-GHz radar retrievals. The average difference between 94-GHz radar and MISR cloud-top heights is shown to be 0.1 ± 0.3 km, while the 3-GHz radar and MISR average cloud-top-height difference is shown to be -0.2 ± 0.6 km. In assessing the value of the CAMRa measurements, the problems associated with low-reflectivity values from stratiform liquid water clouds, ground clutter, and Bragg scattering resulting from turbulent mixing are all addressed. It is shown that, despite the difficulties, the potential exists for CAMRa measurements to contribute significantly to liquid water cloud-top-height retrievals, leading to the production of two-dimensional transects (i.e., maps) of cloud-top height.

Application verification research of cloud computing technology in the field of real time aerospace experiment

Science.gov (United States)

Wan, Junwei; Chen, Hongyan; Zhao, Jing

2017-08-01

According to the requirements of real-time, reliability and safety for aerospace experiment, the single center cloud computing technology application verification platform is constructed. At the IAAS level, the feasibility of the cloud computing technology be applied to the field of aerospace experiment is tested and verified. Based on the analysis of the test results, a preliminary conclusion is obtained: Cloud computing platform can be applied to the aerospace experiment computing intensive business. For I/O intensive business, it is recommended to use the traditional physical machine.

An axial distribution of seeding, proliferation, and osteogenic differentiation of MC3T3-E1 cells and rat bone marrow-derived mesenchymal stem cells across a 3D Thai silk fibroin/gelatin/hydroxyapatite scaffold in a perfusion bioreactor

Energy Technology Data Exchange (ETDEWEB)

Sinlapabodin, Salita; Amornsudthiwat, Phakdee; Damrongsakkul, Siriporn; Kanokpanont, Sorada, E-mail: sorada.k@chula.ac.th

2016-01-01

In cell culture, a perfusion bioreactor provides effective transportation of nutrients, oxygen, and waste removal to and from the core of the scaffold. In addition, it provides mechanical stimuli for enhancing osteogenic differentiation. In this study, we used an axial distribution of cell numbers, alkaline phosphatase (ALP) enzyme activity, and calcium content across 4 cross-sections of 10 mm thick scaffold, made of Thai silk fibroin (SF)/gelatin (G)/hydroxyapatite (HA), as a tool to evaluate the suitable perfusion flow rate. These evaluations cover all cellular developmental phases starting from seeding, to proliferation, and later osteogenic differentiation. Mouse pre-osteoblastic MC3T3-E1 cell lines were used as a cell model during seeding and proliferation. The bioreactor seeded scaffold provided more uniform cell distribution across the scaffold compared to centrifugal and agitation seeding, while the overall number of adhered cells from bioreactor seeding was slightly lower than agitation seeding. The dynamic culture using 1 ml/min perfusion flow rate (initial shear stress of 0.1 dyn/cm{sup 2}) enabled statistically higher MC3T3-E1 proliferation, ALP activity, and calcium deposition than those observed in the static-culturing condition. However, the perfusion flow rate of 1 ml/min seemed not to be enough for enhancing ALP expression across all sections of the scaffold. Rat bone marrow derived stromal cells (rMSC) were used in the detachment test and osteogenic differentiation. It was found that perfusion flow rate of 5 ml/min caused statistically higher cell detachment than that of 1 and 3 ml/min. The perfusion flow rate of 3 ml/min gave the highest rMSC osteogenic differentiation on a SF/G/HA scaffold than other flow rates, as observed from the significantly highest number of ALP enzyme activity and the calcium content without any significant cell growth. In addition, all of these parameters were evenly distributed across all scaffold sections. - Highlights

Coupled fvGCM-GCE Modeling System, 3D Cloud-Resolving Model and Cloud Library

Science.gov (United States)

Tao, Wei-Kuo

2005-01-01

Recent GEWEX Cloud System Study (GCSS) model comparison projects have indicated that cloud- resolving models (CRMs) agree with observations better than traditional single-column models in simulating various types of clouds and cloud systems from different geographic locations. Current and future NASA satellite programs can provide cloud, precipitation, aerosol and other data at very fine spatial and temporal scales. It requires a coupled global circulation model (GCM) and cloud-scale model (termed a super-parameterization or multi-scale modeling framework, MMF) to use these satellite data to improve the understanding of the physical processes that are responsible for the variation in global and regional climate and hydrological systems. The use of a GCM will enable global coverage, and the use of a CRM will allow for better and more sophisticated physical parameterization. NASA satellite and field campaign cloud related datasets can provide initial conditions as well as validation for both the MMF and CRMs. A seed fund is available at NASA Goddard to build a MMF based on the 2D Goddard Cumulus Ensemble (GCE) model and the Goddard finite volume general circulation model (fvGCM). A prototype MMF in being developed and production runs will be conducted at the beginning of 2005. In this talk, I will present: (1) A brief review on GCE model and its applications on precipitation processes, ( 2 ) The Goddard MMF and the major difference between two existing MMFs (CSU MMF and Goddard MMF), (3) A cloud library generated by Goddard MMF, and 3D GCE model, and (4) A brief discussion on the GCE model on developing a global cloud simulator.

Influence of Ice-phase of Hydrometeors on Moist-Convection

Science.gov (United States)

Sud, Y. C.; Walker, G. K.

2003-01-01

Climate models often ignore the influence of ice-phase physics (IPP) of hydrometeors as a second order effect. This has also been true for McRAS (Microphysics of clouds with Relaxed Arakawa Schubert Scheme) developed by the authors. Recognizing that the temperature sounding is critical for moist-convection, and, that IPP would modify it, we investigated the influence of introducing IPP into McRAS coupled to FvGCM (finite volume General Circulation Model with NCAR physics). We analyzed three 3-yr long simulations; the first called Control Case, CC and had no IPP; the other two called Experiments El and E2 had IPP introduced with two different in-cloud freezing assumptions. Simulation El assumed that all hydrometeors remain liquid in the updraft and freeze upon detrainment. Simulation E2 invoked the in-cloud freezing of new condensate generated at subfreezing temperatures in the updraft while old cloud water continued to ascend as liquid. Upon detrainment, this cloud water also froze like in E1. With these assumptions, about 50% of hydrometeors froze in the tower and the rest froze in the anvil. However, in both El and E2, the frozen hydrometeors melted during fall at the first encounter of above freezing ambient temperature. Comparative analysis revealed that El simulated far more mid-level and far less deep clouds while E2 had modified deep and more mid-level clouds as compared to CC along with some major changes around the melt-level. We infer that IPP produced a more realistic response in E2. At the basic level, the results show that ice-phase processes influence convective detrainment at mid- and deep levels in accord with TOGAGOARE observations. The results suggest that IPP can help to mitigate less-than-observed mid-level and over-abundance of deep convective clouds in McRAS.

Allelic variants of melanocortin 3 receptor gene (MC3R) and weight loss in obesity

DEFF Research Database (Denmark)

L. Santos, José; De la Cruz, Rolando; Holst, Claus

2011-01-01

receptor gene (MC3R) have been associated with childhood obesity, higher BMI Z-score and elevated body fat percentage compared to non-carriers. The aim of this study is to assess the association in adults between allelic variants of MC3R with weight loss induced by energy-restricted diets.......The melanocortin system plays an important role in energy homeostasis. Mice genetically deficient in the melanocortin-3 receptor gene have a normal body weight with increased body fat, mild hypophagia compared to wild-type mice. In humans, Thr6Lys and Val81Ile variants of the melanocortin-3...

Deploying and managing a cloud infrastructure real-world skills for the Comptia cloud+ certification and beyond exam CV0-001

CERN Document Server

Salam, Abdul; Ul Haq, Salman

2015-01-01

Learn in-demand cloud computing skills from industry experts Deploying and Managing a Cloud Infrastructure is an excellent resource for IT professionals seeking to tap into the demand for cloud administrators. This book helps prepare candidates for the CompTIA Cloud+ Certification (CV0-001) cloud computing certification exam. Designed for IT professionals with 2-3 years of networking experience, this certification provides validation of your cloud infrastructure knowledge. With over 30 years of combined experience in cloud computing, the author team provides the latest expert perspectives on

Wake Field of the e-Cloud

International Nuclear Information System (INIS)

Heifets, Samuel A

2001-01-01

The wake field of the cloud is derived analytically taking into account the finite size of the cloud and nonlinearity of the electron motion. The analytic expression for the effective transverse wake field caused by the electron cloud in a positron storage ring is derived. The derivation includes the frequency spread in the cloud, which is the main effect of the nonlinearity of electron motion in the cloud. This approach allows calculation of the Q-factor and study the tune spread in a bunch

COMPARISON OF 2D AND 3D APPROACHES FOR THE ALIGNMENT OF UAV AND LIDAR POINT CLOUDS

Directory of Open Access Journals (Sweden)

R. A. Persad

2017-08-01

Full Text Available The automatic alignment of 3D point clouds acquired or generated from different sensors is a challenging problem. The objective of the alignment is to estimate the 3D similarity transformation parameters, including a global scale factor, 3 rotations and 3 translations. To do so, corresponding anchor features are required in both data sets. There are two main types of alignment: i Coarse alignment and ii Refined Alignment. Coarse alignment issues include lack of any prior knowledge of the respective coordinate systems for a source and target point cloud pair and the difficulty to extract and match corresponding control features (e.g., points, lines or planes co-located on both point cloud pairs to be aligned. With the increasing use of UAVs, there is a need to automatically co-register their generated point cloud-based digital surface models with those from other data acquisition systems such as terrestrial or airborne lidar point clouds. This works presents a comparative study of two independent feature matching techniques for addressing 3D conformal point cloud alignment of UAV and lidar data in different 3D coordinate systems without any prior knowledge of the seven transformation parameters.

Intercomparison of model simulations of mixed-phase clouds observed during the ARM Mixed-Phase Arctic Cloud Experiment. Part I: Single layer cloud

Energy Technology Data Exchange (ETDEWEB)

Klein, Stephen A.; McCoy, Renata B.; Morrison, Hugh; Ackerman, Andrew S.; Avramov, Alexander; de Boer, Gijs; Chen, Mingxuan; Cole, Jason N.S.; Del Genio, Anthony D.; Falk, Michael; Foster, Michael J.; Fridlind, Ann; Golaz, Jean-Christophe; Hashino, Tempei; Harrington, Jerry Y.; Hoose, Corinna; Khairoutdinov, Marat F.; Larson, Vincent E.; Liu, Xiaohong; Luo, Yali; McFarquhar, Greg M.; Menon, Surabi; Neggers, Roel A. J.; Park, Sungsu; Poellot, Michael R.; Schmidt, Jerome M.; Sednev, Igor; Shipway, Ben J.; Shupe, Matthew D.; Spangenberg, Douglas A.; Sud, Yogesh C.; Turner, David D.; Veron, Dana E.; von Salzen, Knut; Walker, Gregory K.; Wang, Zhien; Wolf, Audrey B.; Xie, Shaocheng; Xu, Kuan-Man; Yang, Fanglin; Zhang, Gong

2009-02-02

Results are presented from an intercomparison of single-column and cloud-resolving model simulations of a cold-air outbreak mixed-phase stratocumulus cloud observed during the Atmospheric Radiation Measurement (ARM) program's Mixed-Phase Arctic Cloud Experiment. The observed cloud occurred in a well-mixed boundary layer with a cloud top temperature of -15 C. The observed average liquid water path of around 160 g m{sup -2} was about two-thirds of the adiabatic value and much greater than the average mass of ice crystal precipitation which when integrated from the surface to cloud top was around 15 g m{sup -2}. The simulations were performed by seventeen single-column models (SCMs) and nine cloud-resolving models (CRMs). While the simulated ice water path is generally consistent with the observed values, the median SCM and CRM liquid water path is a factor of three smaller than observed. Results from a sensitivity study in which models removed ice microphysics suggest that in many models the interaction between liquid and ice-phase microphysics is responsible for the large model underestimate of liquid water path. Despite this general underestimate, the simulated liquid and ice water paths of several models are consistent with the observed values. Furthermore, there is evidence that models with more sophisticated microphysics simulate liquid and ice water paths that are in better agreement with the observed values, although considerable scatter is also present. Although no single factor guarantees a good simulation, these results emphasize the need for improvement in the model representation of mixed-phase microphysics.

Analysis of performance measures to handle medical E-commerce shopping cart abandonment in cloud

Directory of Open Access Journals (Sweden)

Vedhanayagam Priya

Full Text Available The E-commerce zone is crowded with many Internet users. Medical E-commerce has had significant growth in part because of a great deal of growth in the Indian E-commerce field. Medical E-commerce sites use cloud computing to guarantee a high quality of service anywhere and anytime in the world. For online access, the customer's expectations are very high. Medical E-commerce retailers are directed towards cloud service providers based on their quality of service. During online shopping, impatient customers may abandon a specific medical E-commerce shopping cart due to slow response. This is quite difficult to endure for a medical E-commerce firm. The research described herein observed the effect of shopping cart abandonment on medical E-commerce websites deployed in cloud computing. The impact of the idle virtual machine on customer impatience during medical E-commerce shopping was also studied. The ultimate aim of this study was to propose a stochastic queueing model and to yield results through probability generating functions. The results of the model may be highly useful for a medical E-commerce firm facing customer impatience, so as to design its service system to offer satisfactory quality of service. Keywords: Cloud computing, Queueing, Virtual machine, E-commerce, Cart abandonment, Quality of Service

Premixing of corium into water during a Fuel-Coolant Interaction. The models used in the 3 field version of the MC3D code and two examples of validation on Billeau and FARO experiments

Energy Technology Data Exchange (ETDEWEB)

Berthoud, G.; Crecy, F. de; Duplat, F.; Meignen, R.; Valette, M. [CEA/Grenoble, DRN/DTP, 17 Avenue des Martyrs, 38054 Grenoble Cedex 9 (France)

1998-01-01

This paper presents the <> application of the multiphasic 3D computer code MC3D. This application is devoted to the premixing phase of a Fuel Coolant Interaction (FCI) when large amounts of molten corium flow into water and interact with it. A description of the new features of the model is given (a more complete description of the full model is given in annex). Calculations of Billeau experiments (cold or hot spheres dropped into water) and of a FARO test (<> corium dropped into 5 MPa saturated water) are presented. (author)

Precipitation Processes Developed During ARM (1997), TOGA COARE (1992) GATE (1974), SCSMEX (1998), and KWAJEX (1999): Consistent 3D, Semi-3D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, W.-K.; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

2003-01-01

Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D) have been used to study the response of clouds to large-scale forcing. IN these 3D simulators, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical clouds systems with large horizontal domains at the National Center of Atmospheric Research (NCAR) and at NASA Goddard Space Center. At Goddard, a 3D cumulus Ensemble (GCE) model was used to simulate periods during TOGA COARE, GATE, SCSMEX, ARM, and KWAJEX using a 512 by 512 km domain (with 2-km resolution). The result indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D GCE model simulation. The major objective of this paper are: (1) to assess the performance of the super-parametrization technique, (2) calculate and examine the surface energy (especially radiation) and water budget, and (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

Far-infrared observations of Large Magellanic Cloud H II regions

International Nuclear Information System (INIS)

Werner, M.W.; Becklin, E.E.; Gatley, I.; Ellis, M.J.; Hyland, A.R.; Robinson, G.; Thomas, J.A.

1978-01-01

Far-infrared emission has been measured from four Large Magellanic Cloud H II regions: the 30 Doradus nebula, MC75, MC76 and MC77. The far-infrared radiation is thermal emission from dust heated by starlight. The results show that the LMC H II regions, like H II regions in the Galaxy, have far-infrared luminosities comparable to the total luminosity of their exciting stars. (author)

Delivery of the autofluorescent protein R-phycoerythrin by calcium phosphate nanoparticles into four different eukaryotic cell lines (HeLa, HEK293T, MG-63, MC3T3: Highly efficient, but leading to endolysosomal proteolysis in HeLa and MC3T3 cells.

Directory of Open Access Journals (Sweden)

Mathis Kopp

Full Text Available Nanoparticles can be used as carriers to transport biomolecules like proteins and synthetic molecules across the cell membrane because many molecules are not able to cross the cell membrane on their own. The uptake of nanoparticles together with their cargo typically occurs via endocytosis, raising concerns about the possible degradation of the cargo in the endolysosomal system. As the tracking of a dye-labelled protein during cellular uptake and processing is not indicative of the presence of the protein itself but only for the fluorescent label, a label-free tracking was performed with the red-fluorescing model protein R-phycoerythrin (R-PE. Four different eukaryotic cell lines were investigated: HeLa, HEK293T, MG-63, and MC3T3. Alone, the protein was not taken up by any cell line; only with the help of calcium phosphate nanoparticles, an efficient uptake occurred. After the uptake into HeLa cells, the protein was found in early endosomes (shown by the marker EEA1 and lysosomes (shown by the marker Lamp1. There, it was still intact and functional (i.e. properly folded as its red fluorescence was detected. However, a few hours after the uptake, proteolysis started as indicated by the decreasing red fluorescence intensity in the case of HeLa and MC3T3 cells. 12 h after the uptake, the protein was almost completely degraded in HeLa cells and MC3T3 cells. In HEK293T cells and MG-63 cells, no degradation of the protein was observed. In the presence of Bafilomycin A1, an inhibitor of acidification and protein degradation in lysosomes, the fluorescence of R-PE remained intact over the whole observation period in the four cell lines. These results indicate that despite an efficient nanoparticle-mediated uptake of proteins by cells, a rapid endolysosomal degradation may prevent the desired (e.g. therapeutic effect of a protein inside a cell.

Delivery of the autofluorescent protein R-phycoerythrin by calcium phosphate nanoparticles into four different eukaryotic cell lines (HeLa, HEK293T, MG-63, MC3T3): Highly efficient, but leading to endolysosomal proteolysis in HeLa and MC3T3 cells.

Science.gov (United States)

Kopp, Mathis; Rotan, Olga; Papadopoulos, Chrisovalantis; Schulze, Nina; Meyer, Hemmo; Epple, Matthias

2017-01-01

Nanoparticles can be used as carriers to transport biomolecules like proteins and synthetic molecules across the cell membrane because many molecules are not able to cross the cell membrane on their own. The uptake of nanoparticles together with their cargo typically occurs via endocytosis, raising concerns about the possible degradation of the cargo in the endolysosomal system. As the tracking of a dye-labelled protein during cellular uptake and processing is not indicative of the presence of the protein itself but only for the fluorescent label, a label-free tracking was performed with the red-fluorescing model protein R-phycoerythrin (R-PE). Four different eukaryotic cell lines were investigated: HeLa, HEK293T, MG-63, and MC3T3. Alone, the protein was not taken up by any cell line; only with the help of calcium phosphate nanoparticles, an efficient uptake occurred. After the uptake into HeLa cells, the protein was found in early endosomes (shown by the marker EEA1) and lysosomes (shown by the marker Lamp1). There, it was still intact and functional (i.e. properly folded) as its red fluorescence was detected. However, a few hours after the uptake, proteolysis started as indicated by the decreasing red fluorescence intensity in the case of HeLa and MC3T3 cells. 12 h after the uptake, the protein was almost completely degraded in HeLa cells and MC3T3 cells. In HEK293T cells and MG-63 cells, no degradation of the protein was observed. In the presence of Bafilomycin A1, an inhibitor of acidification and protein degradation in lysosomes, the fluorescence of R-PE remained intact over the whole observation period in the four cell lines. These results indicate that despite an efficient nanoparticle-mediated uptake of proteins by cells, a rapid endolysosomal degradation may prevent the desired (e.g. therapeutic) effect of a protein inside a cell.

An example of radiation-education experiment using a new-type handy cloud chamber

International Nuclear Information System (INIS)

Kushita, Kouhei

2005-01-01

We have developed a new-type handy cloud chamber to overcome shortcomings in the conventional handy cloud chambers. The new-type handy cloud chamber has such advantages as: no dangerous parts or tools are used; can be assembled quickly; has a wider observation window; much less expensive, etc. We have also prepared a new text for this cloud-chamber kit to explain the basic theory of radiation and radioisotopes, which is divided into two levels for children and for adults. Using this new-type handy cloud chamber, we propose an example of an educational experiment on radiation and radioisotopes which can be carried out within one hour. (author)

Intercomparison of model simulations of mixed-phase clouds observed during the ARM Mixed-Phase Arctic Cloud Experiment. Part I: Single layer cloud

Energy Technology Data Exchange (ETDEWEB)

Klein, S A; McCoy, R B; Morrison, H; Ackerman, A; Avramov, A; deBoer, G; Chen, M; Cole, J; DelGenio, A; Golaz, J; Hashino, T; Harrington, J; Hoose, C; Khairoutdinov, M; Larson, V; Liu, X; Luo, Y; McFarquhar, G; Menon, S; Neggers, R; Park, S; Poellot, M; von Salzen, K; Schmidt, J; Sednev, I; Shipway, B; Shupe, M; Spangenberg, D; Sud, Y; Turner, D; Veron, D; Falk, M; Foster, M; Fridlind, A; Walker, G; Wang, Z; Wolf, A; Xie, S; Xu, K; Yang, F; Zhang, G

2008-02-27

Results are presented from an intercomparison of single-column and cloud-resolving model simulations of a cold-air outbreak mixed-phase stratocumulus cloud observed during the Atmospheric Radiation Measurement (ARM) program's Mixed-Phase Arctic Cloud Experiment. The observed cloud occurred in a well-mixed boundary layer with a cloud top temperature of -15 C. The observed liquid water path of around 160 g m{sup -2} was about two-thirds of the adiabatic value and much greater than the mass of ice crystal precipitation which when integrated from the surface to cloud top was around 15 g m{sup -2}. The simulations were performed by seventeen single-column models (SCMs) and nine cloud-resolving models (CRMs). While the simulated ice water path is generally consistent with the observed values, the median SCM and CRM liquid water path is a factor of three smaller than observed. Results from a sensitivity study in which models removed ice microphysics indicate that in many models the interaction between liquid and ice-phase microphysics is responsible for the large model underestimate of liquid water path. Despite this general underestimate, the simulated liquid and ice water paths of several models are consistent with the observed values. Furthermore, there is some evidence that models with more sophisticated microphysics simulate liquid and ice water paths that are in better agreement with the observed values, although considerable scatter is also present. Although no single factor guarantees a good simulation, these results emphasize the need for improvement in the model representation of mixed-phase microphysics. This case study, which has been well observed from both aircraft and ground-based remote sensors, could be a benchmark for model simulations of mixed-phase clouds.

MC3T3-E1 proliferation and differentiation on biphasic mixtures of Mg substituted β-tricalcium phosphate and amorphous calcium phosphate

International Nuclear Information System (INIS)

Singh, Satish S.; Roy, Abhijit; Lee, Boeun E.; Banerjee, Ipsita; Kumta, Prashant N.

2014-01-01

A low temperature aqueous approach was used to synthesize nanocrystalline, high surface area Mg 2+ substituted β-tricalcium phosphate (β-TCMP) to assess its potential use as a synthetic bone graft substitute. X-ray diffraction indicated that β-TCMP was the predominant crystalline phase formed. However, thermal analysis revealed the presence of a secondary amorphous phase which increased with increasing Mg 2+ concentration. Further analysis by Rietveld refinement indicated that the level of ionic substitution of Ca 2+ by Mg 2+ was significantly lower than the amount of Mg 2+ measured using elemental analysis, confirming the formation of a Mg 2+ rich secondary amorphous phase. MC3T3-E1 proliferation on substrates prepared using β-TCMP was assessed using the MTT assay. In comparison to commercially available β-TCP, increased proliferation was observed on samples prepared with 50% Mg, despite elevated Mg 2+ and PO 4 3− concentrations in culture media. Alkaline phosphatase (ALP) activity and qRT-PCR were used to study the effect of varying Mg 2+ substitution on osteogenic differentiation. Cells cultured on β-TCMP substrates prepared with increased Mg 2+ concentrations expressed significantly increased levels of ALP activity and osteogenic genes such as, osteocalcin, collagen-1, and Runx2, in comparison to those cultured on commercially available β-TCP

CAD-based Monte Carlo program for integrated simulation of nuclear system SuperMC

International Nuclear Information System (INIS)

Wu, Yican; Song, Jing; Zheng, Huaqing; Sun, Guangyao; Hao, Lijuan; Long, Pengcheng; Hu, Liqin

2015-01-01

Highlights: • The new developed CAD-based Monte Carlo program named SuperMC for integrated simulation of nuclear system makes use of hybrid MC-deterministic method and advanced computer technologies. SuperMC is designed to perform transport calculation of various types of particles, depletion and activation calculation including isotope burn-up, material activation and shutdown dose, and multi-physics coupling calculation including thermo-hydraulics, fuel performance and structural mechanics. The bi-directional automatic conversion between general CAD models and physical settings and calculation models can be well performed. Results and process of simulation can be visualized with dynamical 3D dataset and geometry model. Continuous-energy cross section, burnup, activation, irradiation damage and material data etc. are used to support the multi-process simulation. Advanced cloud computing framework makes the computation and storage extremely intensive simulation more attractive just as a network service to support design optimization and assessment. The modular design and generic interface promotes its flexible manipulation and coupling of external solvers. • The new developed and incorporated advanced methods in SuperMC was introduced including hybrid MC-deterministic transport method, particle physical interaction treatment method, multi-physics coupling calculation method, geometry automatic modeling and processing method, intelligent data analysis and visualization method, elastic cloud computing technology and parallel calculation method. • The functions of SuperMC2.1 integrating automatic modeling, neutron and photon transport calculation, results and process visualization was introduced. It has been validated by using a series of benchmarking cases such as the fusion reactor ITER model and the fast reactor BN-600 model. - Abstract: Monte Carlo (MC) method has distinct advantages to simulate complicated nuclear systems and is envisioned as a routine

Fragment assignment in the cloud with eXpress-D

Science.gov (United States)

2013-01-01

Background Probabilistic assignment of ambiguously mapped fragments produced by high-throughput sequencing experiments has been demonstrated to greatly improve accuracy in the analysis of RNA-Seq and ChIP-Seq, and is an essential step in many other sequence census experiments. A maximum likelihood method using the expectation-maximization (EM) algorithm for optimization is commonly used to solve this problem. However, batch EM-based approaches do not scale well with the size of sequencing datasets, which have been increasing dramatically over the past few years. Thus, current approaches to fragment assignment rely on heuristics or approximations for tractability. Results We present an implementation of a distributed EM solution to the fragment assignment problem using Spark, a data analytics framework that can scale by leveraging compute clusters within datacenters–“the cloud”. We demonstrate that our implementation easily scales to billions of sequenced fragments, while providing the exact maximum likelihood assignment of ambiguous fragments. The accuracy of the method is shown to be an improvement over the most widely used tools available and can be run in a constant amount of time when cluster resources are scaled linearly with the amount of input data. Conclusions The cloud offers one solution for the difficulties faced in the analysis of massive high-thoughput sequencing data, which continue to grow rapidly. Researchers in bioinformatics must follow developments in distributed systems–such as new frameworks like Spark–for ways to port existing methods to the cloud and help them scale to the datasets of the future. Our software, eXpress-D, is freely available at: http://github.com/adarob/express-d. PMID:24314033

Effects of Apatite Cement Containing Atelocollagen on Attachment to and Proliferation and Differentiation of MC3T3-E1 Osteoblastic Cells

Directory of Open Access Journals (Sweden)

Masaaki Takechi

2016-04-01

Full Text Available To improve the osteoconductivity of apatite cement (AC for reconstruction of bone defects after oral maxillofacial surgery, we previously fabricated AC containing atelocollagen (AC(ate. In the present study, we examined the initial attachment, proliferation and differentiation of mouse osteoblastic cells (MC3T3-E1 cells on the surface of conventional AC (c-AC, AC(ate and a plastic cell dish. The number of osteoblastic cells showing initial attachment to AC(ate was greater than those attached to c-AC and similar to the number attached to the plastic cell wells. We also found that osteoblastic cells were well spread and increased their number on AC(ate in comparison with c-AC and the wells without specimens, while the amount of procollagen type I carboxy-terminal peptide (PIPC produced in osteoblastic cells after three days on AC(ate was greater as compared to the others. There was no significant difference in regard to alkaline phosphatase (ALP activity and osteocalcin production by osteoblastic cells among the three surface types after three and six days. However, after 12 days, ALP activity and the produced osteocalcin were greater with AC(ate. In conclusion, AC(ate may be a useful material with high osteoconductivity for reconstruction of bone defects after oral maxillofacial surgery.

Automated Grid Monitoring for LHCb through HammerCloud

CERN Multimedia

CERN. Geneva

2015-01-01

The HammerCloud system is used by CERN IT to monitor the status of the Worldwide LHC Computing Grid (WLCG). HammerCloud automatically submits jobs to WLCG computing resources, closely replicating the workflow of Grid users (e.g. physicists analyzing data). This allows computation nodes and storage resources to be monitored, software to be tested (somewhat like continuous integration), and new sites to be stress tested with a heavy job load before commissioning. The HammerCloud system has been in use for ATLAS and CMS experiments for about five years. This summer's work involved porting the HammerCloud suite of tools to the LHCb experiment. The HammerCloud software runs functional tests and provides data visualizations. HammerCloud's LHCb variant is written in Python, using the Django web framework and Ganga/DIRAC for job management.

eEcoLiDAR, eScience infrastructure for ecological applications of LiDAR point clouds: reconstructing the 3D ecosystem structure for animals at regional to continental scales

Directory of Open Access Journals (Sweden)

W. Daniel Kissling

2017-07-01

Full Text Available The lack of high-resolution measurements of 3D ecosystem structure across broad spatial extents impedes major advancements in animal ecology and biodiversity science. We aim to fill this gap by using Light Detection and Ranging (LiDAR technology to characterize the vertical and horizontal complexity of vegetation and landscapes at high resolution across regional to continental scales. The newly LiDAR-derived 3D ecosystem structures will be applied in species distribution models for breeding birds in forests and marshlands, for insect pollinators in agricultural landscapes, and songbirds at stopover sites during migration. This will allow novel insights into the hierarchical structure of animal-habitat associations, into why animal populations decline, and how they respond to habitat fragmentation and ongoing land use change. The processing of these massive amounts of LiDAR point cloud data will be achieved by developing a generic interactive eScience environment with multi-scale object-based image analysis (OBIA and interpretation of LiDAR point clouds, including data storage, scalable computing, tools for machine learning and visualisation (feature selection, annotation/segmentation, object classification, and evaluation, and a PostGIS spatial database. The classified objects will include trees, forests, vegetation strata, edges, bushes, hedges, reedbeds etc. with their related metrics, attributes and summary statistics (e.g. vegetation openness, height, density, vertical biomass distribution etc.. The newly developed eScience tools and data will be available to other disciplines and applications in ecology and the Earth sciences, thereby achieving high impact. The project will foster new multi-disciplinary collaborations between ecologists and eScientists and contribute to training a new generation of geo-ecologists.

Identifying the impact of G-quadruplexes on Affymetrix 3' arrays using cloud computing.

Science.gov (United States)

Memon, Farhat N; Owen, Anne M; Sanchez-Graillet, Olivia; Upton, Graham J G; Harrison, Andrew P

2010-01-15

A tetramer quadruplex structure is formed by four parallel strands of DNA/ RNA containing runs of guanine. These quadruplexes are able to form because guanine can Hoogsteen hydrogen bond to other guanines, and a tetrad of guanines can form a stable arrangement. Recently we have discovered that probes on Affymetrix GeneChips that contain runs of guanine do not measure gene expression reliably. We associate this finding with the likelihood that quadruplexes are forming on the surface of GeneChips. In order to cope with the rapidly expanding size of GeneChip array datasets in the public domain, we are exploring the use of cloud computing to replicate our experiments on 3' arrays to look at the effect of the location of G-spots (runs of guanines). Cloud computing is a recently introduced high-performance solution that takes advantage of the computational infrastructure of large organisations such as Amazon and Google. We expect that cloud computing will become widely adopted because it enables bioinformaticians to avoid capital expenditure on expensive computing resources and to only pay a cloud computing provider for what is used. Moreover, as well as financial efficiency, cloud computing is an ecologically-friendly technology, it enables efficient data-sharing and we expect it to be faster for development purposes. Here we propose the advantageous use of cloud computing to perform a large data-mining analysis of public domain 3' arrays.

The SO-20.3 MC and A modernization plan final report

International Nuclear Information System (INIS)

Longmire, V.L.; Ensslin, Norbert; Files, C.; Joseph, Joshua A. Jr.; Rudy, C.R.; Smith, M.K.; Russo, P.A.; Stevens, R.S.; Strittmatter, R.B.; Wilkey, D.D.; Pickett, C.; Brosey, W.; Swanson, J.

2004-01-01

Materials Control and Accountability (MC and A) provides assurance to the nation that nuclear materials are controlled in accordance with their strategic and economic importance and that the misuse, theft or diversion of these materials will be detected. MC and A plays an important part in security at nuclear facilities, especially in addressing threats such as theft of materials, environmental contamination, and nuclear safety incidents associated with nuclear materials. For this reason, it is important that MC and A takes advantage of new technologies and methods in order to provide information on a site's nuclear materials in the most timely and useful manner possible. Within the U.S. Department of Energy (DOE), the Office of Security Policy, Policy Integration and Technical Support Program (SO-20.3) is responsible for the development of safeguards and security technology that enables DOE and NNSA facilities to safeguard their Special Nuclear Materials. The SO-20.3 Program tasked safeguards personnel at Los Alamos National Laboratory to lead a project with representatives from the Y-12 Plant, Lawrence Livermore National Laboratory, and the Savannah River Site to prepare an MC and A Modernization Plan that provides recommendations for development new technologies and methodologies for MC and A in both new and existing DOE facilities. The team was tasked with taking into account new concerns about the protection of nuclear material following the attacks of September 11, 2001. Opportunities for applying new MC and A approaches and technologies that provide increased freedom of operation, increased security and provide a potential for cost savings in existing and new DOE facilities are discussed in this report.

Experience in Grid Site Testing for ATLAS, CMS and LHCb with HammerCloud

CERN Document Server

Van der Ster , D; Medrano Llamas, R; Legger , F; Sciaba, A; Sciacca, G; Ubeda Garca , M

2012-01-01

Frequent validation and stress testing of the network, storage and CPU resources of a grid site is essential to achieve high performance and reliability. HammerCloud was previously introduced with the goals of enabling VO- and site-administrators to run such tests in an automated or on-demand manner. The ATLAS, CMS and LHCb experiments have all developed VO plugins for the service and have successfully integrated it into their grid operations infrastructures. This work will present the experience in running HammerCloud at full scale for more than 3 years and present solutions to the scalability issues faced by the service. First, we will show the particular challenges faced when integrating with CMS and LHCb offline computing, including customized dashboards to show site validation reports for the VOs and a new API to tightly integrate with the LHCbDIRAC Resource Status System. Next, a study of the automatic site exclusion component used by ATLAS will be presented along with results for tuning the exclusion p...

Experience in Grid Site Testing for ATLAS, CMS and LHCb with HammerCloud

CERN Multimedia

CERN. Geneva

2012-01-01

Frequent validation and stress testing of the network, storage and CPU resources of a grid site is essential to achieve high performance and reliability. HammerCloud was previously introduced with the goals of enabling VO- and site-administrators to run such tests in an automated or on-demand manner. The ATLAS, CMS and LHCb experiments have all developed VO plugins for the service and have successfully integrated it into their grid operations infrastructures. This work will present the experience in running HammerCloud at full scale for more than 3 years and present solutions to the scalability issues faced by the service. First, we will show the particular challenges faced when integrating with CMS and LHCb offline computing, including customized dashboards to show site validation reports for the VOs and a new API to tightly integrate with the LHCbDIRAC Resource Status System. Next, a study of the automatic site exclusion component used by ATLAS will be presented along with results for tuning the exclusion ...

Ronald E. McNair Graduate Student Researchers Program

Science.gov (United States)

Monroe, Joseph

2002-01-01

According to the latest report by the National Science Foundation, only eighty-three (83) African-Americans received doctoral degrees in all engineering disciplines in 2000. North Carolina A&T State University (NC A&T) awarded Ph.D.s to 15 African-Americans, in only two engineering disciplines over the past 4 years. It clearly indicates that the partnership between NASA and NC A&T plays a significant role in producing minority engineering Ph.D.s, which this country needs to establish an ethnically diverse workforce to compete in a global economy. Many of these students would not have been able to study for their doctoral degrees without the Ronald E. McNair Graduate Research Fellowship Program.

Joint CARE-ELAN, CARE-HHH-APD, and EUROTEV-WP3 Workshop on Electron Cloud Clearing

CERN Document Server

Scandale, Walter; Schulte, D; Zimmermann, F; Electron Cloud Effects and Technological Consequences; ECL2

2007-01-01

This report contains the Proceedings of the joint CARE-HHH-APD, CARE-ELAN, and EUROTEV-WP3 Mini-Workshop on 'Electron Cloud Clearing - Electron Cloud and Technical Consequences', "ECL2", held at CERN in Geneva, Switzerland, 1-2 March 2007). The ECL2 workshop explored novel technological remedies against electron-cloud formation in an accelerator beam pipe. A primary motivation for the workshop was the expected harmful electron-cloud effects in the upgraded LHC injectors and in future linear colliders, as well as recent beam observations in operating facilities like ANKA, CESR, KEKB, RHIC, and SPS. The solutions discussed at ECL2 included enamel-based clearing electrodes, slotted vacuum chambers, NEG coating, and grooves. Several of the proposed cures were assessed in terms of their clearing efficiency and the associated beam impedance. The workshop also reviewed new simulation tools like the 3D electron-ion build-up 'Faktor', modeling assumptions, analytical calculations, beam experiments, and laboratory meas...

Using long-term ARM observations to evaluate Arctic mixed-phased cloud representation in the GISS ModelE GCM

Science.gov (United States)

Lamer, K.; Fridlind, A. M.; Luke, E. P.; Tselioudis, G.; Ackerman, A. S.; Kollias, P.; Clothiaux, E. E.

2016-12-01

). Alternatively, the second approach consists of comparing model output and ground-based observations that exhibit the same large-scale GWS type (i.e. same cloud top pressure and optical depth patterns) where ground-based observations are associated to large-scale GWS every 3 hours using the closest satellite overpass.

Comparison of 3D point clouds produced by LIDAR and UAV photoscan in the Rochefort cave (Belgium)

Science.gov (United States)

Watlet, Arnaud; Triantafyllou, Antoine; Kaufmann, Olivier; Le Mouelic, Stéphane

2016-04-01

Amongst today's techniques that are able to produce 3D point clouds, LIDAR and UAV (Unmanned Aerial Vehicle) photogrammetry are probably the most commonly used. Both methods have their own advantages and limitations. LIDAR scans create high resolution and high precision 3D point clouds, but such methods are generally costly, especially for sporadic surveys. Compared to LIDAR, UAV (e.g. drones) are cheap and flexible to use in different kind of environments. Moreover, the photogrammetric processing workflow of digital images taken with UAV becomes easier with the rise of many affordable software packages (e.g. Agisoft, PhotoModeler3D, VisualSFM). We present here a challenging study made at the Rochefort Cave Laboratory (South Belgium) comprising surface and underground surveys. The site is located in the Belgian Variscan fold-and-thrust belt, a region that shows many karstic networks within Devonian limestone units. A LIDAR scan has been acquired in the main chamber of the cave (~ 15000 m³) to spatialize 3D point cloud of its inner walls and infer geological beds and structures. Even if the use of LIDAR instrument was not really comfortable in such caving environment, the collected data showed a remarkable precision according to few control points geometry. We also decided to perform another challenging survey of the same cave chamber by modelling a 3D point cloud using photogrammetry of a set of DSLR camera pictures taken from the ground and UAV pictures. The aim was to compare both techniques in terms of (i) implementation of data acquisition and processing, (ii) quality of resulting 3D points clouds (points density, field vs cloud recovery and points precision), (iii) their application for geological purposes. Through Rochefort case study, main conclusions are that LIDAR technique provides higher density point clouds with slightly higher precision than photogrammetry method. However, 3D data modeled by photogrammetry provide visible light spectral information

Set up for Success: An Examination of the Ronald E. McNair Postbaccalaureate Achievement Program's Mentoring Component

Science.gov (United States)

Wyre, Dwuena Cene

2011-01-01

Often, individuals are set up to fail. However, effective mentoring can set individuals up to succeed. This nonexperimental cross-sectional, predictive study examines the Ronald E. McNair Postbaccalaureate Achievement Program's mentoring component. Specific focus is placed on faculty mentor competency and its impact on McNair student intent to…

Precipitation Processes developed during ARM (1997), TOGA COARE(1992), GATE(1 974), SCSMEX(1998) and KWAJEX(1999): Consistent 2D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, W.-K.; Shie, C.-H.; Simpson, J.; Starr, D.; Johnson, D.; Sud, Y.

2003-01-01

Real clouds and clouds systems are inherently three dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical cloud system with large horizontal domains at the National Center for Atmospheric Research. The results indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D simulations of these same cases. The reason for the strong similarity between the 2D and 3D CRM simulations is that the observed large-scale advective tendencies of potential temperature, water vapor mixing ratio, and horizontal momentum were used as the main forcing in both the 2D and 3D models. Interestingly, the 2D and 3D versions of the CRM used in CSU and U.K. Met Office showed significant differences in the rainfall and cloud statistics for three ARM cases. The major objectives of this project are to calculate and axamine: (1)the surface energy and water budgets, (2) the precipitation processes in the convective and stratiform regions, (3) the cloud upward and downward mass fluxes in the convective and stratiform regions; (4) cloud characteristics such as size, updraft intensity and lifetime, and (5) the entrainment and detrainment rates associated with clouds and cloud systems that developed in TOGA COARE, GATE, SCSMEX, ARM and KWAJEX. Of special note is that the analyzed (model generated) data sets are all produced by the same current version of the GCE model, i.e. consistent model physics and configurations. Trajectory analyse and inert tracer calculation will be conducted to identify the differences and similarities in the organization of convection between simulated 2D and 3D cloud systems.

Zero-Gravity Atmospheric Cloud Physics Experiment Laboratory engineering concepts/design tradeoffs. Volume 1: Study results

Science.gov (United States)

Greco, R. V.; Eaton, L. R.; Wilkinson, H. C.

1974-01-01

The work is summarized which was accomplished from January 1974 to October 1974 for the Zero-Gravity Atmospheric Cloud Physics Laboratory. The definition and development of an atmospheric cloud physics laboratory and the selection and delineation of candidate experiments that require the unique environment of zero gravity or near zero gravity are reported. The experiment program and the laboratory concept for a Spacelab payload to perform cloud microphysics research are defined. This multimission laboratory is planned to be available to the entire scientific community to utilize in furthering the basic understanding of cloud microphysical processes and phenomenon, thereby contributing to improved weather prediction and ultimately to provide beneficial weather control and modification.

Extending 3D near-cloud corrections from shorter to longer wavelengths

International Nuclear Information System (INIS)

Marshak, Alexander; Evans, K. Frank; Várnai, Tamás; Wen, Guoyong

2014-01-01

Satellite observations have shown a positive correlation between cloud amount and aerosol optical thickness (AOT) that can be explained by the humidification of aerosols near clouds, and/or by cloud contamination by sub-pixel size clouds and the cloud adjacency effect. The last effect may substantially increase reflected radiation in cloud-free columns, leading to overestimates in the retrieved AOT. For clear-sky areas near boundary layer clouds the main contribution to the enhancement of clear sky reflectance at shorter wavelengths comes from the radiation scattered into clear areas by clouds and then scattered to the sensor by air molecules. Because of the wavelength dependence of air molecule scattering, this process leads to a larger reflectance increase at shorter wavelengths, and can be corrected using a simple two-layer model [18]. However, correcting only for molecular scattering skews spectral properties of the retrieved AOT. Kassianov and Ovtchinnikov [9] proposed a technique that uses spectral reflectance ratios to retrieve AOT in the vicinity of clouds; they assumed that the cloud adjacency effect influences the spectral ratio between reflectances at two wavelengths less than it influences the reflectances themselves. This paper combines the two approaches: It assumes that the 3D correction for the shortest wavelength is known with some uncertainties, and then it estimates the 3D correction for longer wavelengths using a modified ratio method. The new approach is tested with 3D radiances simulated for 26 cumulus fields from Large-Eddy Simulations, supplemented with 40 aerosol profiles. The results showed that (i) for a variety of cumulus cloud scenes and aerosol profiles over ocean the 3D correction due to cloud adjacency effect can be extended from shorter to longer wavelengths and (ii) the 3D corrections for longer wavelengths are not very sensitive to unbiased random uncertainties in the 3D corrections at shorter wavelengths. - Highlights: �

Precipitation Processes developed during ARM (1997), TOGA COARE (1992), GATE (1974), SCSMEX (1998), and KWAJEX (1999), Consistent 2D, semi-3D and 3D Cloud Resolving Model Simulations

Science.gov (United States)

Tao, Wei-Kuo; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

2003-01-01

Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D). A few 3D CRMs have been used to study the response of clouds to large-scale forcing. In these 3D simulations, the model domain was small, and the integration time was 6 hours. The major objectives of this paper are: (1) to assess the performance of the super-parameterization technique (i.e. is 2D or semi-3D CRM appropriate for the super-parameterization?); (2) calculate and examine the surface energy (especially radiation) and water budgets; (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

Dependence of stratocumulus-topped boundary-layer entrainment on cloud-water sedimentation: Impact on global aerosol indirect effect in GISS ModelE3 single column model and global simulations

Science.gov (United States)

Ackerman, A. S.; Kelley, M.; Cheng, Y.; Fridlind, A. M.; Del Genio, A. D.; Bauer, S.

2017-12-01

Reduction in cloud-water sedimentation induced by increasing droplet concentrations has been shown in large-eddy simulations (LES) and direct numerical simulation (DNS) to enhance boundary-layer entrainment, thereby reducing cloud liquid water path and offsetting the Twomey effect when the overlying air is sufficiently dry, which is typical. Among recent upgrades to ModelE3, the latest version of the NASA Goddard Institute for Space Studies (GISS) general circulation model (GCM), are a two-moment stratiform cloud microphysics treatment with prognostic precipitation and a moist turbulence scheme that includes an option in its entrainment closure of a simple parameterization for the effect of cloud-water sedimentation. Single column model (SCM) simulations are compared to LES results for a stratocumulus case study and show that invoking the sedimentation-entrainment parameterization option indeed reduces the dependence of cloud liquid water path on increasing aerosol concentrations. Impacts of variations of the SCM configuration and the sedimentation-entrainment parameterization will be explored. Its impact on global aerosol indirect forcing in the framework of idealized atmospheric GCM simulations will also be assessed.

Elastic extension of a local analysis facility on external clouds for the LHC experiments

Science.gov (United States)

Ciaschini, V.; Codispoti, G.; Rinaldi, L.; Aiftimiei, D. C.; Bonacorsi, D.; Calligola, P.; Dal Pra, S.; De Girolamo, D.; Di Maria, R.; Grandi, C.; Michelotto, D.; Panella, M.; Taneja, S.; Semeria, F.

2017-10-01

The computing infrastructures serving the LHC experiments have been designed to cope at most with the average amount of data recorded. The usage peaks, as already observed in Run-I, may however originate large backlogs, thus delaying the completion of the data reconstruction and ultimately the data availability for physics analysis. In order to cope with the production peaks, the LHC experiments are exploring the opportunity to access Cloud resources provided by external partners or commercial providers. In this work we present the proof of concept of the elastic extension of a local analysis facility, specifically the Bologna Tier-3 Grid site, for the LHC experiments hosted at the site, on an external OpenStack infrastructure. We focus on the Cloud Bursting of the Grid site using DynFarm, a newly designed tool that allows the dynamic registration of new worker nodes to LSF. In this approach, the dynamically added worker nodes instantiated on an OpenStack infrastructure are transparently accessed by the LHC Grid tools and at the same time they serve as an extension of the farm for the local usage.

The Impact of the Diurnal Cycle of Clouds and Precipitation over the Maritime Continent on the Propagation of the MJO into the Western Pacific

Science.gov (United States)

Burleyson, C. D.; Hagos, S. M.; Feng, Z.

2016-12-01

The processes that determine the interaction between the islands of the maritime continent (MC) and the eastward propagation of the Madden-Julian Oscillation (MJO) are poorly understood. We are undertaking a series of observational and modeling analyses aimed at understanding how clouds and precipitation over the islands of the MC lead to changes in the intensity of the MJO (inferred by the amplitude of the Real-time Multivariate MJO index [RMM] and other metrics) as it crosses the MC. One component of our analysis uses the long-term measurements from the DOE Atmospheric Radiation Measurement (ARM) sites in the Tropical Western Pacific (TWP) to examine cloud radiative effects as the MJO crosses the MC. Using the multi-year ARM dataset and a cloud resolving model (CRM), we show that the MJO interacts with the diurnal cycle of surface heating, clouds, and precipitation over the islands of the MC in a way that weakens it. Additionally, using a satellite climatology based on the TRMM 3B42 dataset we found that MJO episodes that weaken as they cross the MC are characterized by more frequent precipitation and warmer sea surface temperatures (SSTs) south of the equator and less frequent precipitation north of the equator compared to cases where the MJO intensifies. The north-south polarity in SSTs suggests a seasonal dependence in the ability of the MJO to cross the MC. This seasonality was confirmed by looking the seasonal distribution of changes in MJO amplitude as it crosses the MC. Consistent with the SST result, we found that MJO episodes that intensify as they cross the MC are more likely to occur during the northern hemisphere summer and less likely to occur during the northern hemisphere winter (Fig. 1). A regional CRM and satellite observations are used jointly to explore the processes responsible for this seasonality and to examine the impact of interannual oscillations such as ENSO and monsoons on the ability of the MJO to cross the MC. Fig. 1. The annual

CAD-based Monte Carlo program for integrated simulation of nuclear system SuperMC

International Nuclear Information System (INIS)

Wu, Y.; Song, J.; Zheng, H.; Sun, G.; Hao, L.; Long, P.; Hu, L.

2013-01-01

SuperMC is a (Computer-Aided-Design) CAD-based Monte Carlo (MC) program for integrated simulation of nuclear systems developed by FDS Team (China), making use of hybrid MC-deterministic method and advanced computer technologies. The design aim, architecture and main methodology of SuperMC are presented in this paper. The taking into account of multi-physics processes and the use of advanced computer technologies such as automatic geometry modeling, intelligent data analysis and visualization, high performance parallel computing and cloud computing, contribute to the efficiency of the code. SuperMC2.1, the latest version of the code for neutron, photon and coupled neutron and photon transport calculation, has been developed and validated by using a series of benchmarking cases such as the fusion reactor ITER model and the fast reactor BN-600 model

Electric Vehicle Performance at McMurdo Station (Antarctica) and Comparison with McMurdo Station Conventional Vehicles

Energy Technology Data Exchange (ETDEWEB)

Sears, T.; Lammert, M.; Colby, K.; Walter, R.

2014-09-01

This report examines the performance of two electric vehicles (EVs) at McMurdo, Antarctica (McMurdo). The study examined the performance of two e-ride Industries EVs initially delivered to McMurdo on February 16, 2011, and compared their performance and fuel use with that of conventional vehicles that have a duty cycle similar to that of the EVs used at McMurdo.

Characterizing Sorghum Panicles using 3D Point Clouds

Science.gov (United States)

Lonesome, M.; Popescu, S. C.; Horne, D. W.; Pugh, N. A.; Rooney, W.

2017-12-01

To address demands of population growth and impacts of global climate change, plant breeders must increase crop yield through genetic improvement. However, plant phenotyping, the characterization of a plant's physical attributes, remains a primary bottleneck in modern crop improvement programs. 3D point clouds generated from terrestrial laser scanning (TLS) and unmanned aerial systems (UAS) based structure from motion (SfM) are a promising data source to increase the efficiency of screening plant material in breeding programs. This study develops and evaluates methods for characterizing sorghum (Sorghum bicolor) panicles (heads) in field plots from both TLS and UAS-based SfM point clouds. The TLS point cloud over experimental sorghum field at Texas A&M farm in Burleston County TX were collected using a FARO Focus X330 3D laser scanner. SfM point cloud was generated from UAS imagery captured using a Phantom 3 Professional UAS at 10m altitude and 85% image overlap. The panicle detection method applies point cloud reflectance, height and point density attributes characteristic of sorghum panicles to detect them and estimate their dimensions (panicle length and width) through image classification and clustering procedures. We compare the derived panicle counts and panicle sizes with field-based and manually digitized measurements in selected plots and study the strengths and limitations of each data source for sorghum panicle characterization.

THE DUSTIEST POST-MAIN SEQUENCE STARS IN THE MAGELLANIC CLOUDS

Energy Technology Data Exchange (ETDEWEB)

Jones, Olivia C.; Meixner, Margaret; Roman-Duval, Julia [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Sargent, Benjamin A. [Center for Imaging Science and Laboratory for Multiwavelength Astrophysics, Rochester Institute of Technology, 54 Lomb Memorial Drive, Rochester, NY 14623 (United States); Boyer, Martha L. [Observational Cosmology Lab, Code 665, NASA Goddard Space Flight Center, Greenbelt, MD 20771 (United States); Sewiło, Marta [The Johns Hopkins University, Department of Physics and Astronomy, 366 Bloomberg Center, 3400 N. Charles Street, Baltimore, MD 21218 (United States); Hony, Sacha [Institut für Theoretische Astrophysik, Zentrum für Astronomie, Universitt Heidelberg, Albert-Ueberle-Str. 2, D-69120 Heidelberg (Germany)

2015-10-01

Using observations from the Herschel Inventory of The Agents of Galaxy Evolution (HERITAGE) survey of the Magellanic Clouds (MC), we have found 35 evolved stars and stellar end products that are bright in the far-infrared. These 28 (LMC) and 7 (SMC) sources were selected from the 529 evolved star candidates in the HERITAGE far-infrared point source catalogs. Our source identification method is based on spectral confirmation, spectral energy distribution characteristics, careful examination of the multiwavelength images and includes constraints on the luminosity, resulting in a thoroughly vetted list of evolved stars. These sources span a wide range in luminosity and hence initial mass. We found 13 low- to intermediate-mass evolved stars, including asymptotic giant branch (AGB) stars, post-AGB stars, planetary nebulae, and a symbiotic star. We also identify 10 high mass stars, including 4 of the 15 known B[e] stars in the MC, 3 extreme red supergiants that are highly enshrouded by dust, a Luminous Blue Variable, a Wolf–Rayet star, and two supernova remnants. Further, we report the detection of 9 probable evolved objects which were previously undescribed in the literature. These sources are likely to be among the dustiest evolved objects in the MC. The Herschel emission may either be due to dust produced by the evolved star or it may arise from swept-up interstellar medium material.

The Importance of Business Model Factors for Cloud Computing Adoption: Role of Previous Experiences

Directory of Open Access Journals (Sweden)

Bogataj Habjan Kristina

2017-08-01

Full Text Available Background and Purpose: Bringing several opportunities for more effective and efficient IT governance and service exploitation, cloud computing is expected to impact the European and global economies significantly. Market data show that despite many advantages and promised benefits the adoption of cloud computing is not as fast and widespread as foreseen. This situation shows the need for further exploration of the potentials of cloud computing and its implementation on the market. The purpose of this research was to identify individual business model factors with the highest impact on cloud computing adoption. In addition, the aim was to identify the differences in opinion regarding the importance of business model factors on cloud computing adoption according to companies’ previous experiences with cloud computing services.

Reconstruction of 3D Shapes of Opaque Cumulus Clouds from Airborne Multiangle Imaging: A Proof-of-Concept

Science.gov (United States)

Davis, A. B.; Bal, G.; Chen, J.

2015-12-01

. Extension to 3D volumes is straightforward but the next challenge is to accommodate images at lower spatial resolution, e.g., from MISR/Terra. G. Bal, J. Chen, and A.B. Davis (2015). Reconstruction of cloud geometry from multi-angle images, Inverse Problems in Imaging (submitted).

The impact of horizontal heterogeneities, cloud fraction, and cloud dynamics on warm cloud effective radii and liquid water path from CERES-like Aqua MODIS retrievals

Science.gov (United States)

Painemal, D.; Minnis, P.; Sun-Mack, S.

2013-05-01

The impact of horizontal heterogeneities, liquid water path (LWP from AMSR-E), and cloud fraction (CF) on MODIS cloud effective radius (re), retrieved from the 2.1 μm (re2.1) and 3.8 μm (re3.8) channels, is investigated for warm clouds over the southeast Pacific. Values of re retrieved using the CERES Edition 4 algorithms are averaged at the CERES footprint resolution (~ 20 km), while heterogeneities (Hσ) are calculated as the ratio between the standard deviation and mean 0.64 μm reflectance. The value of re2.1 strongly depends on CF, with magnitudes up to 5 μm larger than those for overcast scenes, whereas re3.8 remains insensitive to CF. For cloudy scenes, both re2.1 and re3.8 increase with Hσ for any given AMSR-E LWP, but re2.1 changes more than for re3.8. Additionally, re3.8 - re2.1 differences are positive ( 50 g m-2, and negative (up to -4 μm) for larger Hσ. Thus, re3.8 - re2.1 differences are more likely to reflect biases associated with cloud heterogeneities rather than information about the cloud vertical structure. The consequences for MODIS LWP are also discussed.

Tricuspid annuloplasty with the MC3 ring and septal plication technique.

Science.gov (United States)

Isomura, Tadashi; Hirota, Masanori; Hoshino, Joji; Fukada, Yasuhisa; Kondo, Taichi; Takahashi, Yu

2015-01-01

Functional tricuspid regurgitation is caused by annular dilation mainly in the posterior annulus. However, ring annuloplasty does not always prevent the recurrence of tricuspid regurgitation due to dilation of the septal annulus. We developed a septal plication technique with a 3-dimensional MC3 ring. Between 2006 and 2011, 76 patients (male/female 30/46; mean age 68 ± 11 years) with functional tricuspid regurgitation received tricuspid ring annuloplasty. After placement of the annular sutures, the 3 commissural ring portions were fixed on the equivalent commissures to plicate the anterior and posterior annulus. The end of the septal ring portion was fixed at the optimal annular position to obtain minimal tricuspid regurgitation. All patients were followed-up for a mean of 47 ± 18 months; the longest duration was 79 months. Although there was no operative death, one patient died of sepsis during hospitalization (hospital mortality 1.3%). After implantation of the MC3 ring (mean size 31.0 ± 3.3 mm), additional edge-to-edge sutures were required for minor leakage in 5 (7%) patients. The degree of tricuspid regurgitation was significantly reduced at discharge (0.5 ± 0.6) and midterm (0.6 ± 0.6) compared to 2.5 ± 0.7 before the operation (p tricuspid ring annuloplasty with a 3-dimensional MC3 ring. © The Author(s) 2014 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

Using S3 cloud storage with ROOT and CvmFS

Science.gov (United States)

Arsuaga-Ríos, María; Heikkilä, Seppo S.; Duellmann, Dirk; Meusel, René; Blomer, Jakob; Couturier, Ben

2015-12-01

Amazon S3 is a widely adopted web API for scalable cloud storage that could also fulfill storage requirements of the high-energy physics community. CERN has been evaluating this option using some key HEP applications such as ROOT and the CernVM filesystem (CvmFS) with S3 back-ends. In this contribution we present an evaluation of two versions of the Huawei UDS storage system stressed with a large number of clients executing HEP software applications. The performance of concurrently storing individual objects is presented alongside with more complex data access patterns as produced by the ROOT data analysis framework. Both Huawei UDS generations show a successful scalability by supporting multiple byte-range requests in contrast with Amazon S3 or Ceph which do not support these commonly used HEP operations. We further report the S3 integration with recent CvmFS versions and summarize the experience with CvmFS/S3 for publishing daily releases of the full LHCb experiment software stack.

The Cloud Feedback Model Intercomparison Project (CFMIP) contribution to CMIP6.

Science.gov (United States)

Webb, Mark J.; Andrews, Timothy; Bodas-Salcedo, Alejandro; Bony, Sandrine; Bretherton, Christopher S.; Chadwick, Robin; Chepfer, Helene; Douville, Herve; Good, Peter; Kay, Jennifer E.;

The Complex Point Cloud for the Knowledge of the Architectural Heritage. Some Experiences

Science.gov (United States)

Aveta, C.; Salvatori, M.; Vitelli, G. P.

2017-05-01

The present paper aims to present a series of experiences and experimentations that a group of PhD from the University of Naples Federico II conducted over the past decade. This work has concerned the survey and the graphic restitution of monuments and works of art, finalized to their conservation. The targeted query of complex point cloud acquired by 3D scanners, integrated with photo sensors and thermal imaging, has allowed to explore new possibilities of investigation. In particular, we will present the scientific results of the experiments carried out on some important historical artifacts with distinct morphological and typological characteristics. According to aims and needs that emerged during the connotative process, with the support of archival and iconographic historical research, the laser scanner technology has been used in many different ways. New forms of representation, obtained directly from the point cloud, have been tested for the elaboration of thematic studies for documenting the pathologies and the decay of materials, for correlating visible aspects with invisible aspects of the artifact.

THE COMPLEX POINT CLOUD FOR THE KNOWLEDGE OF THE ARCHITECTURAL HERITAGE. SOME EXPERIENCES

Directory of Open Access Journals (Sweden)

C. Aveta

2017-05-01

Full Text Available The present paper aims to present a series of experiences and experimentations that a group of PhD from the University of Naples Federico II conducted over the past decade. This work has concerned the survey and the graphic restitution of monuments and works of art, finalized to their conservation. The targeted query of complex point cloud acquired by 3D scanners, integrated with photo sensors and thermal imaging, has allowed to explore new possibilities of investigation. In particular, we will present the scientific results of the experiments carried out on some important historical artifacts with distinct morphological and typological characteristics. According to aims and needs that emerged during the connotative process, with the support of archival and iconographic historical research, the laser scanner technology has been used in many different ways. New forms of representation, obtained directly from the point cloud, have been tested for the elaboration of thematic studies for documenting the pathologies and the decay of materials, for correlating visible aspects with invisible aspects of the artifact.

A CLOUD BOUNDARY DETECTION SCHEME COMBINED WITH ASLIC AND CNN USING ZY-3, GF-1/2 SATELLITE IMAGERY

Directory of Open Access Journals (Sweden)

Z. Guo

2018-04-01

Full Text Available Remote sensing optical image cloud detection is one of the most important problems in remote sensing data processing. Aiming at the information loss caused by cloud cover, a cloud detection method based on convolution neural network (CNN is presented in this paper. Firstly, a deep CNN network is used to extract the multi-level feature generation model of cloud from the training samples. Secondly, the adaptive simple linear iterative clustering (ASLIC method is used to divide the detected images into superpixels. Finally, the probability of each superpixel belonging to the cloud region is predicted by the trained network model, thereby generating a cloud probability map. The typical region of GF-1/2 and ZY-3 were selected to carry out the cloud detection test, and compared with the traditional SLIC method. The experiment results show that the average accuracy of cloud detection is increased by more than 5 %, and it can detected thin-thick cloud and the whole cloud boundary well on different imaging platforms.

PROGRA2 experiment: new results for dust clouds and regoliths

Science.gov (United States)

Renard, J.-B.; Hadamcik, E.; Worms, J.-C.; Levasseur-Regourd, A.-C.; Daugeron, D.

With the CNES-sponsored PROGRA2 facility, linear polarization of scattered light is performed on various types of dust clouds in microgravity during parabolic flights onboard the CNES- and ESA-sponsored A300 Zéro-G aircraft. Clouds of fluffy aggregates are also studied on the ground when lifted by an air-draught. The effect of the physical properties of the particles, such as the grains size and size distribution, the real part of the refractive index, and the structure is currently being studied. The size distribution of the agglomerates is measured in the field of view from the polarized component images. The large number of phase curves already obtained in the various conditions of measurements, in order to build a database (about 160 curves) allows us to better connect the physical properties with the observed polarization of the dust in the clouds. The aim is to compare these curves with those obtained in the solar system by remote-sensing and in-situ techniques for interplanetary dust, cometary coma, and solid particles in planetary atmospheres (Renard et al., 2003). Measurements on layers of particles (i.e. on the ground) are then compared with remote measurements on asteroidal regoliths and planetary surfaces. New phase curves will be presented and discussed i.e. for quartz samples, crystals, fluffy mixtures of alumina and silica, and a high porosity ``regolith'' analogue made of micron-sized silica spheres. This work will contribute to the choice of the samples to be studied with the IMPACT/ICAPS instrument onboard the ISS. J.-B. Renard, E. Hadamcik, T. Lemaire, J.-C. Worms and A.-C. Levasseur-Regourd (2003). Polarization imaging of dust cloud particles: improvement and applications of the PROGRA2 instrument, ASR 31, 12, 2511-2518.

Smoke/Sulfates, Clouds and Radiation Experiment in Brazil (SCAR-B) Data Set Version 5.5

Data.gov (United States)

National Aeronautics and Space Administration — SCAR_B_G8_FIRE data are Smoke/Sulfates, Clouds and Radiation Experiment in Brazil, GOES-8 ABBA Diurnal Fire Product (1995 Fire Season) data.Smoke/Sulfates, Clouds...

spMC: an R-package for 3D lithological reconstructions based on spatial Markov chains

Science.gov (United States)

Sartore, Luca; Fabbri, Paolo; Gaetan, Carlo

2016-09-01

The paper presents the spatial Markov Chains (spMC) R-package and a case study of subsoil simulation/prediction located in a plain site of Northeastern Italy. spMC is a quite complete collection of advanced methods for data inspection, besides spMC implements Markov Chain models to estimate experimental transition probabilities of categorical lithological data. Furthermore, simulation methods based on most known prediction methods (as indicator Kriging and CoKriging) were implemented in spMC package. Moreover, other more advanced methods are available for simulations, e.g. path methods and Bayesian procedures, that exploit the maximum entropy. Since the spMC package was developed for intensive geostatistical computations, part of the code is implemented for parallel computations via the OpenMP constructs. A final analysis of this computational efficiency compares the simulation/prediction algorithms by using different numbers of CPU cores, and considering the example data set of the case study included in the package.

Extracting valley-ridge lines from point-cloud-based 3D fingerprint models.

Science.gov (United States)

Pang, Xufang; Song, Zhan; Xie, Wuyuan

2013-01-01

3D fingerprinting is an emerging technology with the distinct advantage of touchless operation. More important, 3D fingerprint models contain more biometric information than traditional 2D fingerprint images. However, current approaches to fingerprint feature detection usually must transform the 3D models to a 2D space through unwrapping or other methods, which might introduce distortions. A new approach directly extracts valley-ridge features from point-cloud-based 3D fingerprint models. It first applies the moving least-squares method to fit a local paraboloid surface and represent the local point cloud area. It then computes the local surface's curvatures and curvature tensors to facilitate detection of the potential valley and ridge points. The approach projects those points to the most likely valley-ridge lines, using statistical means such as covariance analysis and cross correlation. To finally extract the valley-ridge lines, it grows the polylines that approximate the projected feature points and removes the perturbations between the sampled points. Experiments with different 3D fingerprint models demonstrate this approach's feasibility and performance.

Comparison of Cloud and Aerosol Detection between CERES Edition 3 Cloud Mask and CALIPSO Version 2 Data Products

Science.gov (United States)

Trepte, Qing; Minnis, Patrick; Sun-Mack, Sunny; Trepte, Charles

Clouds and aerosol play important roles in the global climate system. Accurately detecting their presence, altitude, and properties using satellite radiance measurements is a crucial first step in determining their influence on surface and top-of-atmosphere radiative fluxes. This paper presents a comparison analysis of a new version of the Clouds and Earth's Radiant Energy System (CERES) Edition 3 cloud detection algorithms using Aqua MODIS data with the recently released Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) Version 2 Vertical Feature Mask (VFM). Improvements in CERES Edition 3 cloud mask include dust detection, thin cirrus tests, enhanced low cloud detection at night, and a smoother transition from mid-latitude to polar regions. For the CALIPSO Version 2 data set, changes to the lidar calibration can result in significant improvements to its identification of optically thick aerosol layers. The Aqua and CALIPSO satellites, part of the A-train satellite constellation, provide a unique opportunity for validating passive sensor cloud and aerosol detection using an active sensor. In this paper, individual comparison cases will be discussed for different types of clouds and aerosols over various surfaces, for daytime and nighttime conditions, and for regions ranging from the tropics to the poles. Examples will include an assessment of the CERES detection algorithm for optically thin cirrus, marine stratus, and polar night clouds as well as its ability to characterize Saharan dust plumes off the African coast. With the CALIPSO lidar's unique ability to probe the vertical structure of clouds and aerosol layers, it provides an excellent validation data set for cloud detection algorithms, especially for polar nighttime clouds.

The in vitro effects of macrophages on the osteogenic capabilities of MC3T3-E1 cells encapsulated in a biomimetic poly(ethylene glycol) hydrogel.

Science.gov (United States)

Saleh, Leila S; Carles-Carner, Maria; Bryant, Stephanie J

2018-04-15

Poly(ethylene glycol) PEG-based hydrogels are promising for cell encapsulation and tissue engineering, but are known to elicit a foreign body response (FBR) in vivo. The goal of this study was to investigate the impact of the FBR, and specifically the presence of inflammatory macrophages, on encapsulated cells and their ability to synthesize new extracellular matrix. This study employed an in vitro co-culture system with murine macrophages and MC3T3-E1 pre-osteoblasts encapsulated in a bone-mimetic hydrogel, which were cultured in transwell inserts, and exposed to an inflammatory stimulant, lipopolysaccharide (LPS). The co-culture was compared to mono-cultures of the cell-laden hydrogels alone and with LPS over 28 days. Two macrophage cell sources, RAW 264.7 and primary derived, were investigated. The presence of LPS-stimulated primary macrophages led to significant changes in the cell-laden hydrogel by a 5.3-fold increase in percent apoptotic osteoblasts at day 28, 4.2-fold decrease in alkaline phosphatase activity at day 10, and 7-fold decrease in collagen deposition. The presence of LPS-stimulated RAW macrophages led to significant changes in the cell-laden hydrogel by 5-fold decrease in alkaline phosphatase activity at day 10 and 4-fold decrease in collagen deposition. Mineralization, as measured by von Kossa stain or quantified by calcium content, was not sensitive to macrophages or LPS. Elevated interleukin-6 and tumor necrosis factor-α secretion were detected in mono-cultures with LPS and co-cultures. Overall, primary macrophages had a more severe inhibitory effect on osteoblast differentiation than the macrophage cell line, with greater apoptosis and collagen I reduction. In summary, this study highlights the detrimental effects of macrophages on encapsulated cells for bone tissue engineering. Poly(ethylene glycol) (PEG)-based hydrogels are promising for cell encapsulation and tissue engineering, but are known to elicit a foreign body response (FBR) in

Numerical simulations of mixing conditions and aerosol dynamics in the CERN CLOUD chamber

CERN Document Server

Voigtländer, J; Rondo, L; Kürten, A; Stratmann, F

2012-01-01

To study the effect of galactic cosmic rays on aerosols and clouds, the Cosmics Leaving OUtdoor Droplets (CLOUD) project was established. Experiments are carried out at a 26.1 m3 tank at CERN (Switzerland). In the experiments, the effect of ionizing radiation on H2SO4 particle formation and growth is investigated. To evaluate the experimental configuration, the experiment was simulated using a coupled multidimensional computational fluid dynamics (CFD) – particle model. In the model the coupled fields of gas/vapor species, temperature, flow velocity and particle properties were computed to investigate mixing state and mixing times of the CLOUD tank's contents. Simulation results show that a 1-fan configuration, as used in first experiments, may not be sufficient to ensure a homogeneously mixed chamber. To mix the tank properly, two fans and sufficiently high fan speeds are necessary. The 1/e response times for instantaneous changes of wall temperature and saturation ratio were found to be in the order of fe...

Review of e+e- experiments with PLUTO from 3 to 31 GeV

International Nuclear Information System (INIS)

Criegee, L.; Knies, G.

1981-07-01

The contributions of the PLUTO experiment to e + e - physics at collision energies in the range of 3-31 GeV are reviewed. The review briefly sketches the storage rings DORIS and PETRA at DESY, and describes the most important features of the PLUTO detector, of data processing, and of the analysis methods. It covers the physics results in the fields of electroweak interactions, of the heavy lepton tau and the search for still heavier leptons, of hadron production with evidence for quark and gluon jets, as well as multiparton effects, of UPSILON decays and their relation to QCD, and concludes with first results in high-energy photon-photon interactions. (orig.)

3D reconstruction of tropospheric cirrus clouds by stereovision system

Science.gov (United States)

Nadjib Kouahla, Mohamed; Moreels, Guy; Seridi, Hamid

2016-07-01

A stereo imaging method is applied to measure the altitude of cirrus clouds and provide a 3D map of the altitude of the layer centroid. They are located in the high troposphere and, sometimes in the lower stratosphere, between 6 and 10 km high. Two simultaneous images of the same scene are taken with Canon cameras (400D) in two sites distant of 37 Km. Each image processed in order to invert the perspective effect and provide a satellite-type view of the layer. Pairs of matched points that correspond to a physical emissive point in the common area are identified in calculating a correlation coefficient (ZNCC: Zero mean Normalized Cross-correlation or ZSSD: as Zero mean Sum of Squared Differences). This method is suitable for obtaining 3D representations in the case of low-contrast objects. An observational campaign was conducted in June 2014 in France. The images were taken simultaneously at Marnay (47°17'31.5" N, 5°44'58.8" E; altitude 275 m) 25 km northwest of Besancon and in Mont poupet (46°58'31.5" N, 5°52'22.7" E; altitude 600 m) southwest of Besancon at 43 km. 3D maps of the Natural cirrus clouds and artificial like "aircraft trails" are retrieved. They are compared with pseudo-relief intensity maps of the same region. The mean altitude of the cirrus barycenter is located at 8.5 ± 1km on June 11.

Evolution of particle composition in CLOUD nucleation experiments

CERN Document Server

Keskinen, H; Joutsensaari, J; Tsagkogeorgas, G; Duplissy, J; Schobesberger, S; Gysel, M; Riccobono, F; Bianchi, F; Yli-Juuti, T; Lehtipalo, K; Rondo, L; Breitenlechner, M; Kupc, A; Almeida, J; Amorim, A; Dunne, E M; Downard, A J; Ehrhart, S; Franchin, A; Kajos, M K; Kirkby, J; Kurten, A; Nieminen, T; Makhmutov, V; Mathot, S; Miettinen, P; Onnela, A; Petaja, T; Praplan, A; Santos, F D; Schallhart, S; Sipila, M; Stozhkov, Y; Tome, A; Vaattovaara, P; Wimmer, D; Prevot, A; Dommen, J; Donahue, N M; Flagan, R C; Weingartner, E; Viisanen, Y; Riipinen, I; Hansel, A; Curtius, J; Kulmala, M; Worsnop, D R; Baltensperger, U; Wex, H; Stratmann, F; Laaksonen, A; Slowik, J G

2013-01-01

Sulphuric acid, ammonia, amines, and oxidised organics play a crucial role in nanoparticle formation in the atmosphere. In this study, we investigate the composition of nucleated nanoparticles formed from these compounds in the CLOUD (Cosmics Leaving Outdoor Droplets) chamber experiments at CERN (Centre europ ́ een pour la recherche nucl ́ eaire). The investigation was carried out via analysis of the particle hygroscopicity, ethanol affinity, oxidation state, and ion composition. Hygroscopicity was studied by a hygroscopic tandem differential mobility analyser and a cloud condensation nuclei counter, ethanol affinity by an organic differential mobility analyser and particle oxidation level by a high-resolution time-of-flight aerosol mass spectrometer. The ion composition was studied by an atmospheric pressure interface time-of-flight mass spectrometer. The volume fraction of the organics in the particles during theirgrowth from sizes of a few nanometers to tens of nanometers was derived from measured hygros...

The impact of horizontal heterogeneities, cloud fraction, and cloud dynamics on warm cloud effective radii and liquid water path from CERES-like Aqua MODIS retrievals

OpenAIRE

D. Painemal; P. Minnis; S. Sun-Mack

2013-01-01

The impact of horizontal heterogeneities, liquid water path (LWP from AMSR-E), and cloud fraction (CF) on MODIS cloud effective radius (re), retrieved from the 2.1 μm (re2.1) and 3.8 μm (re3.8) channels, is investigated for warm clouds over the southeast Pacific. Values of re retrieved using the CERES Edition 4 algorithms are averaged at the CERES footprint resolution (~ 20 km), while heterogeneities (Hσ) are calculated as the ratio between the standard deviation and mean...

Layer-by-layer assembly of peptide based bioorganic–inorganic hybrid scaffolds and their interactions with osteoblastic MC3T3-E1 cells

International Nuclear Information System (INIS)

Romanelli, Steven M.; Fath, Karl R.; Phekoo, Aruna P.; Knoll, Grant A.; Banerjee, Ipsita A.

2015-01-01

In this work we have developed a new family of biocomposite scaffolds for bone tissue regeneration by utilizing self-assembled fluorenylmethyloxycarbonyl protected Valyl-cetylamide (FVC) nanoassemblies as templates. To tailor the assemblies for enhanced osteoblast attachment and proliferation, we incorporated (a) Type I collagen, (b) a hydroxyapatite binding peptide sequence (EDPHNEVDGDK) derived from dentin sialophosphoprotein and (c) the osteoinductive bone morphogenetic protein-4 (BMP-4) to the templates by layer-by-layer assembly. The assemblies were then incubated with hydroxyapatite nanocrystals blended with varying mass percentages of TiO 2 nanoparticles and coated with alginate to form three dimensional scaffolds for potential applications in bone tissue regeneration. The morphology was examined by TEM and SEM and the binding interactions were probed by FITR spectroscopy. The scaffolds were found to be non-cytotoxic, adhered to mouse preosteoblast MC3T3-E1 cells and promoted osteogenic differentiation as indicated by the results obtained by alkaline phosphatase assay. Furthermore, they were found to be biodegradable and possessed inherent antibacterial capability. Thus, we have developed a new family of tissue-engineered biocomposite scaffolds with potential applications in bone regeneration. - Highlights: • Fmoc-val-cetylamide assemblies were used as templates. • Collagen, a short dentin sialophosphoprotein derived sequence and BMP-4 were incorporated. • Hydroxyapatite–TiO 2 nanocomposite blends and alginate were incorporated. • The 3D scaffold biocomposites adhered to preosteoblasts and promoted osteoblast differentiation. • The biocomposites also displayed antimicrobial activity

Layer-by-layer assembly of peptide based bioorganic–inorganic hybrid scaffolds and their interactions with osteoblastic MC3T3-E1 cells

Energy Technology Data Exchange (ETDEWEB)

Romanelli, Steven M. [Fordham University Department of Chemistry, 441 East Fordham Road, Bronx, NY 10458 (United States); Fath, Karl R. [The City University of New York, Queens College, Department of Biology, 65-30 Kissena Blvd, Flushing, NY 11367 (United States); The Graduate Center, The City University of New York, 365 Fifth Avenue, NY 10016 (United States); Phekoo, Aruna P. [The City University of New York, Queens College, Department of Biology, 65-30 Kissena Blvd, Flushing, NY 11367 (United States); Knoll, Grant A. [Fordham University Department of Chemistry, 441 East Fordham Road, Bronx, NY 10458 (United States); Banerjee, Ipsita A., E-mail: banerjee@fordham.edu [Fordham University Department of Chemistry, 441 East Fordham Road, Bronx, NY 10458 (United States)

2015-06-01

In this work we have developed a new family of biocomposite scaffolds for bone tissue regeneration by utilizing self-assembled fluorenylmethyloxycarbonyl protected Valyl-cetylamide (FVC) nanoassemblies as templates. To tailor the assemblies for enhanced osteoblast attachment and proliferation, we incorporated (a) Type I collagen, (b) a hydroxyapatite binding peptide sequence (EDPHNEVDGDK) derived from dentin sialophosphoprotein and (c) the osteoinductive bone morphogenetic protein-4 (BMP-4) to the templates by layer-by-layer assembly. The assemblies were then incubated with hydroxyapatite nanocrystals blended with varying mass percentages of TiO{sub 2} nanoparticles and coated with alginate to form three dimensional scaffolds for potential applications in bone tissue regeneration. The morphology was examined by TEM and SEM and the binding interactions were probed by FITR spectroscopy. The scaffolds were found to be non-cytotoxic, adhered to mouse preosteoblast MC3T3-E1 cells and promoted osteogenic differentiation as indicated by the results obtained by alkaline phosphatase assay. Furthermore, they were found to be biodegradable and possessed inherent antibacterial capability. Thus, we have developed a new family of tissue-engineered biocomposite scaffolds with potential applications in bone regeneration. - Highlights: • Fmoc-val-cetylamide assemblies were used as templates. • Collagen, a short dentin sialophosphoprotein derived sequence and BMP-4 were incorporated. • Hydroxyapatite–TiO{sub 2} nanocomposite blends and alginate were incorporated. • The 3D scaffold biocomposites adhered to preosteoblasts and promoted osteoblast differentiation. • The biocomposites also displayed antimicrobial activity.

Knockdown of Indian hedgehog protein induces an inhibition of cell growth and differentiation in osteoblast MC3T3-E1 cells

Science.gov (United States)

Deng, Ang; Zhang, Hongqi; Hu, Minyu; Liu, Shaohua; Gao, Qile; Wang, Yuxiang; Guo, Chaofeng

2017-01-01

Indian hedgehog protein (Ihh) is evolutionarily conserved and serves important roles in controlling the differentiation of progenitor cells into osteoblasts. Ihh null mutant mice exhibit a failure of osteoblast development in endochondral bone. Although studies have demonstrated that Ihh signaling is a potent local factor that regulates osteoblast differentiation, the specific transcription factors that determine osteoblast differentiation remain unclear. Further studies are required to determine the precise mechanism through which Ihh regulates osteoblast differentiation. In the present study, Ihh was knocked down in osteoblast MC3T3-E1 cells using short hairpin RNA, to investigate the function of Ihh in osteoblast proliferation and differentiation and to examine the potential mechanism through which Ihh induces osteoblast apoptosis and cell cycle arrest. It was observed that the knockdown of Ihh induced a marked inhibition of cell growth and increased the apoptosis rate compared with the negative control osteoblasts. Downregulation of Ihh resulted in a cell cycle arrest at the G1 to S phase boundary in osteoblasts. In addition, the knockdown of Ihh decreased the alkaline phosphatase activity and mineral deposition of osteoblasts. The inhibitory roles of Ihh downregulation in osteoblast growth and differentiation may be associated with the transforming growth factor-β/mothers against decapentaplegic homolog and tumor necrosis factor receptor superfamily member 11B/tumor necrosis factor ligand superfamily member 11 signaling pathways. Manipulating either Ihh expression or its signaling components may be of benefit for the treatment of skeletal diseases. PMID:28990069

Results from the CERN pilot CLOUD experiment

DEFF Research Database (Denmark)

Duplissy, J.; Enghoff, Martin Andreas Bødker; Aplin, K.L.

2010-01-01

the charged fraction, a few of the aerosol bursts appear to have a contribution from ion-induced nucleation and ion-ion recombination to form neutral clusters. Some indications were also found for the accelerator beam timing and intensity to influence the aerosol particle formation rate at the highest...... become significant, improvements are needed in controlling the experimental variables and in the reproducibility of the experiments. Finally, concerning technical aspects, the most important lessons for the CLOUD design include the stringent requirement of internal cleanliness of the aerosol chamber...

Results from the CERN pilot CLOUD experiment

DEFF Research Database (Denmark)

Duplissy, J.; Enghoff, Martin Andreas Bødker; Aplin, K. L.

2009-01-01

is involved in the nucleation of atmospheric aerosols. However, sulphuric acid alone is not able to explain the observed rapid growth rates, which suggests the presence of additional trace vapours in the aerosol chamber, whose identity is unknown. By analysing the charged fraction, a few of the aerosol bursts...... are needed in controlling the experimental variables and in the reproducibility of the experiments. Finally, concerning technical aspects, the most important lessons for the CLOUD design include the stringent requirement of internal cleanliness of the aerosol chamber, as well as maintenance of extremely...

Association of MC3R gene polymorphisms with body weight in the red fox and comparative gene organization in four canids.

Science.gov (United States)

Skorczyk, A; Flisikowski, K; Szydlowski, M; Cieslak, J; Fries, R; Switonski, M

2011-02-01

There are five genes encoding melanocortin receptors. Among canids, the genes have mainly been studied in the dog (MC1R, MC2R and MC4R). The MC4R gene has also been analysed in the red fox. In this report, we present a study of chromosome localization, comparative sequence analysis and polymorphism of the MC3R gene in the dog, red fox, arctic fox and Chinese raccoon dog. The gene was localized by FISH to the following chromosome: 24q24-25 in the dog, 14p16 in the red fox, 18q13 in the arctic fox and NPP4p15 in the Chinese raccoon dog. A high identity level of the MC3R gene sequences was observed among the species, ranging from 96.0% (red fox--Chinese raccoon dog) to 99.5% (red fox--arctic fox). Altogether, eight polymorphic sites were found in the red fox, six in the Chinese raccoon dog and two in the dog, while the arctic fox appeared to be monomorphic. In addition, association of several polymorphisms with body weight was analysed in red foxes (the number of genotyped animals ranged from 319 to 379). Two polymorphisms in the red fox, i.e. a silent substitution c.957A>C and c.*185C>T in the 3'-flanking sequence, showed a significant association (P < 0.01) with body weight. © 2010 The Authors, Animal Genetics © 2010 Stichting International Foundation for Animal Genetics.

The Feasibility of 3d Point Cloud Generation from Smartphones

Science.gov (United States)

Alsubaie, N.; El-Sheimy, N.

2016-06-01

This paper proposes a new technique for increasing the accuracy of direct geo-referenced image-based 3D point cloud generated from low-cost sensors in smartphones. The smartphone's motion sensors are used to directly acquire the Exterior Orientation Parameters (EOPs) of the captured images. These EOPs, along with the Interior Orientation Parameters (IOPs) of the camera/ phone, are used to reconstruct the image-based 3D point cloud. However, because smartphone motion sensors suffer from poor GPS accuracy, accumulated drift and high signal noise, inaccurate 3D mapping solutions often result. Therefore, horizontal and vertical linear features, visible in each image, are extracted and used as constraints in the bundle adjustment procedure. These constraints correct the relative position and orientation of the 3D mapping solution. Once the enhanced EOPs are estimated, the semi-global matching algorithm (SGM) is used to generate the image-based dense 3D point cloud. Statistical analysis and assessment are implemented herein, in order to demonstrate the feasibility of 3D point cloud generation from the consumer-grade sensors in smartphones.

Heterogeneous ice nucleation activity of bacteria: new laboratory experiments at simulated cloud conditions

Directory of Open Access Journals (Sweden)

O. Möhler

2008-10-01

Full Text Available The ice nucleation activities of five different Pseudomonas syringae, Pseudomonas viridiflava and Erwinia herbicola bacterial species and of Snomax™ were investigated in the temperature range between −5 and −15°C. Water suspensions of these bacteria were directly sprayed into the cloud chamber of the AIDA facility of Forschungszentrum Karlsruhe at a temperature of −5.7°C. At this temperature, about 1% of the Snomax™ cells induced immersion freezing of the spray droplets before the droplets evaporated in the cloud chamber. The living cells didn't induce any detectable immersion freezing in the spray droplets at −5.7°C. After evaporation of the spray droplets the bacterial cells remained as aerosol particles in the cloud chamber and were exposed to typical cloud formation conditions in experiments with expansion cooling to about −11°C. During these experiments, the bacterial cells first acted as cloud condensation nuclei to form cloud droplets. Then, only a minor fraction of the cells acted as heterogeneous ice nuclei either in the condensation or the immersion mode. The results indicate that the bacteria investigated in the present study are mainly ice active in the temperature range between −7 and −11°C with an ice nucleation (IN active fraction of the order of 10⁻⁴. In agreement to previous literature results, the ice nucleation efficiency of Snomax™ cells was much larger with an IN active fraction of 0.2 at temperatures around −8°C.

Safety assessment of McB-E60 (extract of a Momordica sp.: Subchronic toxicity study in rats

Directory of Open Access Journals (Sweden)

Narendra S. Deshmukh

Full Text Available Momordica charantia plant is consumed as a foodstuff in some south Asian curries while its extract preparations have been traditionally used for lowering blood glucose levels in patients with diabetes mellitus. Nutritional Health Institute Laboratories (NHIL, LLC, Florida informed that it patented a new plant McB, as an interhybrid of three plants of Momordica genus. The objective of the present study was to investigate potential adverse effects, if any, of McB-E60 (extract of a Momordica sp. in rats following subchronic administration. Sprague-Dawley rats (10/sex/group were administered via oral gavage 0 (control, 250, 500 and 1000 mg/kg body weight (bw/day of McB-E60 for 90 days. Additional 28-day recovery groups were maintained at control and high dose levels. No mortality or significant and adverse changes in clinical signs, neurological signs, body weight gain or feed intake were noted. No toxicologically significant changes in hematology, clinical chemistry, urinalysis and organ weights were noted. Gross and microscopic pathology examinations did not reveal treatment-related abnormalities. Any changes noted were incidental and within historical control ranges. Based on the results of this study, the No-Observed-Effect Level (NOEL for McB-E60 (extract of a Momordica sp. was determined as greater than 1000 mg/kg bw/day, the highest dose tested. Keywords: Dietary supplement, Safety, Toxicity

Qualitative analysis of the e-cloud formation

International Nuclear Information System (INIS)

Heifets, Samuel A

2002-01-01

The qualitative analysis of the electron cloud formation is presented. Two mechanisms of the cloud formation, generation of jets of primary photo-electrons and thermalization of electrons in the electron cloud, are analyzed and compared with simulations for the NLC damping ring [1

Tomographic retrieval of cloud liquid water fields from a single scanning microwave radiometer aboard a moving platform – Part 1: Field trial results from the Wakasa Bay experiment

Directory of Open Access Journals (Sweden)

D. Huang

2010-07-01

Full Text Available Tomographic methods offer great potential for retrieving three-dimensional spatial distributions of cloud liquid water from radiometric observations by passive microwave sensors. Fixed tomographic systems require multiple radiometers, while mobile systems can use just a single radiometer. Part 1 (this paper examines the results from a limited cloud tomography trial with a single-radiometer airborne system carried out as part of the 2003 AMSR-E validation campaign over Wakasa Bay of the Sea of Japan. During this trial, the Polarimetric Scanning Radiometer (PSR and Microwave Imaging Radiometer (MIR aboard the NASA P-3 research aircraft provided a useful dataset for testing the cloud tomography method over a system of low-level clouds. We do tomographic retrievals with a constrained inversion algorithm using three configurations: PSR, MIR, and combined PSR and MIR data. The liquid water paths from the PSR retrieval are consistent with those from the MIR retrieval. The retrieved cloud field based on the combined data appears to be physically plausible and consistent with the cloud image obtained by a cloud radar. We find that some vertically-uniform clouds appear at high altitudes in the retrieved field where the radar shows clear sky. This is likely due to the sub-optimal data collection strategy. This sets the stage for Part 2 of this study that aims to define optimal data collection strategies using observation system simulation experiments.

Experience in using commercial clouds in CMS

Energy Technology Data Exchange (ETDEWEB)

Bauerdick, L. [Fermilab; Bockelman, B. [Nebraska U.; Dykstra, D. [Fermilab; Fuess, S. [Fermilab; Garzoglio, G. [Fermilab; Girone, M. [CERN; Gutsche, O. [Fermilab; Holzman, B. [Fermilab; Hugnagel, D. [Fermilab; Kim, H. [Fermilab; Kennedy, R. [Fermilab; Mason, D. [Fermilab; Spentzouris, P. [Fermilab; Timm, S. [Fermilab; Tiradani, A. [Fermilab; Vaandering, E. [Fermilab

2017-10-03

Historically high energy physics computing has been performed on large purposebuilt computing systems. In the beginning there were single site computing facilities, which evolved into the Worldwide LHC Computing Grid (WLCG) used today. The vast majority of the WLCG resources are used for LHC computing and the resources are scheduled to be continuously used throughout the year. In the last several years there has been an explosion in capacity and capability of commercial and academic computing clouds. Cloud resources are highly virtualized and intended to be able to be flexibly deployed for a variety of computing tasks. There is a growing interest amongst the cloud providers to demonstrate the capability to perform large scale scientific computing. In this presentation we will discuss results from the CMS experiment using the Fermilab HEPCloud Facility, which utilized both local Fermilab resources and Amazon Web Services (AWS). The goal was to work with AWS through a matching grant to demonstrate a sustained scale approximately equal to half of the worldwide processing resources available to CMS. We will discuss the planning and technical challenges involved in organizing the most IO intensive CMS workflows on a large-scale set of virtualized resource provisioned by the Fermilab HEPCloud. We will describe the data handling and data management challenges. Also, we will discuss the economic issues and cost and operational efficiency comparison to our dedicated resources. At the end we will consider the changes in the working model of HEP computing in a domain with the availability of large scale resources scheduled at peak times.

Non-equilibrium ionization around clouds evaporating in the interstellar medium

International Nuclear Information System (INIS)

Ballet, J.; Luciani, J.F.; Mora, P.

1986-01-01

It is of prime importance for global models of the interstellar medium to know whether dense clouds do or do not evaporate in the hot coronal gas. The rate of mass exchanges between phases depends very much on that. McKee and Ostriker's model, for instance, assumes that evaporation is important enough to control the expansion of supernova remnants, and that mass loss obeys the law derived by Cowie and McKee. In fact, the geometry of the magnetic field is nearly unknown, and it might totally inhibit evaporation, if the clouds are not regularly connected to the hot gas. Up to now, the only test of the theory is the U.V. observation (by the Copernicus and IUE satellites) of absorption lines of ions such as OVI or NV, that exist at temperatures of a few 100,000 K typical of transition layers around evaporating clouds. Other means of testing the theory are discussed

First vapor explosion calculations performed with MC3D thermal-hydraulic code

Energy Technology Data Exchange (ETDEWEB)

Brayer, C.; Berthoud, G. [CEA Centre d`Etudes de Grenoble, 38 (France). Direction des Reacteurs Nucleaires

1998-01-01

This paper presents the first calculations performed with the `explosion` module of the multiphase computer code MC3D, which is devoted to the fine fragmentation and explosion phase of a fuel coolant interaction. A complete description of the physical laws included in this module is given. The fragmentation models, taking into account two fragmentation mechanisms, a thermal one and an hydrodynamic one, are also developed here. Results to some calculations to test the numerical behavior of MC3D and to test the explosion models in 1D or 2D are also presented. (author)

Design of new dusty plasma apparatus to view 3D particle dynamics of fluorescent dust clouds

Science.gov (United States)

Thome, Kathreen; Fontanetta, Alexandra; Zwicker, Andrew

2008-11-01

Particles suspended in dusty plasmas represent both contamination in industrial plasmas and a primary interstellar medium component. Typically, dusty plasma behavior is studied by laser scattering techniques that provide 2D dust cloud images. However, the 3D structure of the dust cloud is essential to understand the waves, group dynamics, and stabilities of the cloud. Techniques used to study this structure include stereoscopic particle image velocimetry and rapid laser scanning. Our UV illumination technique reveals translational and rotational velocities of fluorescent dust particles as a function of UV intensity. The new argon DC glow discharge experiment designed to study the 3D aspects of fluorescent dust consists of a 13.25'' diameter chamber, two 8'' window ports for CCD cameras, one along the plasma and another transverse to it, two additional 8'' window ports transverse to the plasma for laser or UV light illumination of the dust cloud, and a diagnostic probe port. Results from different electrodes--including mesh and ring--observations and imaging will be presented.

Low cost digital photogrammetry: From the extraction of point clouds by SFM technique to 3D mathematical modeling

Science.gov (United States)

Michele, Mangiameli; Giuseppe, Mussumeci; Salvatore, Zito

2017-07-01

The Structure From Motion (SFM) is a technique applied to a series of photographs of an object that returns a 3D reconstruction made up by points in the space (point clouds). This research aims at comparing the results of the SFM approach with the results of a 3D laser scanning in terms of density and accuracy of the model. The experience was conducted by detecting several architectural elements (walls and portals of historical buildings) both with a 3D laser scanner of the latest generation and an amateur photographic camera. The point clouds acquired by laser scanner and those acquired by the photo camera have been systematically compared. In particular we present the experience carried out on the "Don Diego Pappalardo Palace" site in Pedara (Catania, Sicily).

Implant Angle Monitor System of MC3-II

International Nuclear Information System (INIS)

Sato, Fumiaki; Sano, Makoto; Nakaoka, Hiroaki; Fujii, Yoshito; Kudo, Tetuya; Nakanishi, Makoto; Koike, Masazumi; Fujino, Yasushi

2008-01-01

Precise implant angle control is required for the latest generation of ion implanters to meet further shrink semiconductor device requirements. Especially, the highest angle accuracy is required for Halo implant process of Logic devices. The Halo implant angle affects the device performance, because slight differences of beam divergence change the overlap profile towards the extension. Additionally, twist angle accuracy is demanded in case of channeling angle implant. Therefore monitoring beam angles and wafer twist angles is important. A new monitoring system for the MC3-II, SEN Corp.'s single wafer type medium current implanter has been developed. This paper describes the angle control performance and monitoring system of the MC3-II. For the twist angle control, we developed a wafer notch angle monitor. The system monitors the wafer notch image on the platen. And the notch angle variation is calculated by using image processing method. It is also able to adjust the notch angle according to the angle error. For the tilt angle control, we developed a vertical beam profile monitor. The monitor system can detect beam profile of vertical directions with horizontally scanning beam. It also measures beam angles of a tilt direction to a wafer. The system configuration and sample beam data are presented.

Lxcloud: a prototype for an internal cloud in HEP. Experiences and lessons learned

International Nuclear Information System (INIS)

Goasguen, Sebastien; Moreira, Belmiro; Roche, Ewan; Schwickerath, Ulrich

2012-01-01

Born out of the desire to virtualize our batch compute farm CERN has developed an internal cloud known as lxcloud. Since December 2010 it has been used to run a small but sufficient part of our batch workload thus allowing operational and development experience to be gained. Recently, this service has evolved to a public cloud allowing selected physics users an alternate way of accessing resources.

Self-Similar Spin Images for Point Cloud Matching

Science.gov (United States)

Pulido, Daniel

The rapid growth of Light Detection And Ranging (Lidar) technologies that collect, process, and disseminate 3D point clouds have allowed for increasingly accurate spatial modeling and analysis of the real world. Lidar sensors can generate massive 3D point clouds of a collection area that provide highly detailed spatial and radiometric information. However, a Lidar collection can be expensive and time consuming. Simultaneously, the growth of crowdsourced Web 2.0 data (e.g., Flickr, OpenStreetMap) have provided researchers with a wealth of freely available data sources that cover a variety of geographic areas. Crowdsourced data can be of varying quality and density. In addition, since it is typically not collected as part of a dedicated experiment but rather volunteered, when and where the data is collected is arbitrary. The integration of these two sources of geoinformation can provide researchers the ability to generate products and derive intelligence that mitigate their respective disadvantages and combine their advantages. Therefore, this research will address the problem of fusing two point clouds from potentially different sources. Specifically, we will consider two problems: scale matching and feature matching. Scale matching consists of computing feature metrics of each point cloud and analyzing their distributions to determine scale differences. Feature matching consists of defining local descriptors that are invariant to common dataset distortions (e.g., rotation and translation). Additionally, after matching the point clouds they can be registered and processed further (e.g., change detection). The objective of this research is to develop novel methods to fuse and enhance two point clouds from potentially disparate sources (e.g., Lidar and crowdsourced Web 2.0 datasets). The scope of this research is to investigate both scale and feature matching between two point clouds. The specific focus of this research will be in developing a novel local descriptor

Clouds of Venus

Energy Technology Data Exchange (ETDEWEB)

Knollenberg, R G [Particle Measuring Systems, Inc., 1855 South 57th Court, Boulder, Colorado 80301, U.S.A.; Hansen, J [National Aeronautics and Space Administration, New York (USA). Goddard Inst. for Space Studies; Ragent, B [National Aeronautics and Space Administration, Moffett Field, Calif. (USA). Ames Research Center; Martonchik, J [Jet Propulsion Lab., Pasadena, Calif. (USA); Tomasko, M [Arizona Univ., Tucson (USA)

1977-05-01

The current state of knowledge of the Venusian clouds is reviewed. The visible clouds of Venus are shown to be quite similar to low level terrestrial hazes of strong anthropogenic influence. Possible nucleation and particle growth mechanisms are presented. The Pioneer Venus experiments that emphasize cloud measurements are described and their expected findings are discussed in detail. The results of these experiments should define the cloud particle composition, microphysics, thermal and radiative heat budget, rough dynamical features and horizontal and vertical variations in these and other parameters. This information should be sufficient to initialize cloud models which can be used to explain the cloud formation, decay, and particle life cycle.

Blue skies for CLOUD

CERN Multimedia

2006-01-01

Through the recently approved CLOUD experiment, CERN will soon be contributing to climate research. Tests are being performed on the first prototype of CLOUD, an experiment designed to assess cosmic radiation influence on cloud formation.

A Classification-oriented Method of Feature Image Generation for Vehicle-borne Laser Scanning Point Clouds

Directory of Open Access Journals (Sweden)

YANG Bisheng

2016-02-01

Full Text Available An efficient method of feature image generation of point clouds to automatically classify dense point clouds into different categories is proposed, such as terrain points, building points. The method first uses planar projection to sort points into different grids, then calculates the weights and feature values of grids according to the distribution of laser scanning points, and finally generates the feature image of point clouds. Thus, the proposed method adopts contour extraction and tracing means to extract the boundaries and point clouds of man-made objects (e.g. buildings and trees in 3D based on the image generated. Experiments show that the proposed method provides a promising solution for classifying and extracting man-made objects from vehicle-borne laser scanning point clouds.

Evolution of particle composition in CLOUD nucleation experiments

Directory of Open Access Journals (Sweden)

H. Keskinen

2013-06-01

Full Text Available Sulphuric acid, ammonia, amines, and oxidised organics play a crucial role in nanoparticle formation in the atmosphere. In this study, we investigate the composition of nucleated nanoparticles formed from these compounds in the CLOUD (Cosmics Leaving Outdoor Droplets chamber experiments at CERN (Centre européen pour la recherche nucléaire. The investigation was carried out via analysis of the particle hygroscopicity, ethanol affinity, oxidation state, and ion composition. Hygroscopicity was studied by a hygroscopic tandem differential mobility analyser and a cloud condensation nuclei counter, ethanol affinity by an organic differential mobility analyser and particle oxidation level by a high-resolution time-of-flight aerosol mass spectrometer. The ion composition was studied by an atmospheric pressure interface time-of-flight mass spectrometer. The volume fraction of the organics in the particles during their growth from sizes of a few nanometers to tens of nanometers was derived from measured hygroscopicity assuming the Zdanovskii–Stokes–Robinson relationship, and compared to values gained from the spectrometers. The ZSR-relationship was also applied to obtain the measured ethanol affinities during the particle growth, which were used to derive the volume fractions of sulphuric acid and the other inorganics (e.g. ammonium salts. In the presence of sulphuric acid and ammonia, particles with a mobility diameter of 150 nm were chemically neutralised to ammonium sulphate. In the presence of oxidation products of pinanediol, the organic volume fraction of freshly nucleated particles increased from 0.4 to ~0.9, with an increase in diameter from 2 to 63 nm. Conversely, the sulphuric acid volume fraction decreased from 0.6 to 0.1 when the particle diameter increased from 2 to 50 nm. The results provide information on the composition of nucleated aerosol particles during their growth in the presence of various combinations of sulphuric acid

Big Data, Internet of Things and Cloud Convergence--An Architecture for Secure E-Health Applications.

Science.gov (United States)

Suciu, George; Suciu, Victor; Martian, Alexandru; Craciunescu, Razvan; Vulpe, Alexandru; Marcu, Ioana; Halunga, Simona; Fratu, Octavian

2015-11-01

Big data storage and processing are considered as one of the main applications for cloud computing systems. Furthermore, the development of the Internet of Things (IoT) paradigm has advanced the research on Machine to Machine (M2M) communications and enabled novel tele-monitoring architectures for E-Health applications. However, there is a need for converging current decentralized cloud systems, general software for processing big data and IoT systems. The purpose of this paper is to analyze existing components and methods of securely integrating big data processing with cloud M2M systems based on Remote Telemetry Units (RTUs) and to propose a converged E-Health architecture built on Exalead CloudView, a search based application. Finally, we discuss the main findings of the proposed implementation and future directions.

MODIS/Aqua Aerosol Cloud Water Vapor Ozone 8-Day L3 Global 1Deg CMG V006

Data.gov (United States)

National Aeronautics and Space Administration — MODIS/Aqua Aerosol Cloud Water Vapor Ozone 8-Day L3 Global 1Deg CMG (MYD08_E3). MODIS was launched aboard the Aqua satellite on May 04, 2002 (1:30 pm equator...

Track reconstruction for the Mu3e experiment based on a novel Multiple Scattering fit

Directory of Open Access Journals (Sweden)

Kozlinskiy Alexandr

2017-01-01

Full Text Available The Mu3e experiment is designed to search for the lepton flavor violating decay μ+ → e+e+e−. The aim of the experiment is to reach a branching ratio sensitivity of 10−16. In a first phase the experiment will be performed at an existing beam line at the Paul-Scherrer Institute (Switzerland providing 108 muons per second, which will allow to reach a sensitivity of 2 · 10−15. The muons with a momentum of about 28 MeV/c are stopped and decay at rest on a target. The decay products (positrons and electrons with energies below 53MeV are measured by a tracking detector consisting of two double layers of 50 μm thin silicon pixel sensors. The high granularity of the pixel detector with a pixel size of 80 μm × 80 μm allows for a precise track reconstruction in the high multiplicity environment of the Mu3e experiment, reaching 100 tracks per reconstruction frame of 50 ns in the final phase of the experiment. To deal with such high rates and combinatorics, the Mu3e track reconstruction uses a novel fit algorithm that in the simplest case takes into account only the multiple scattering, which allows for a fast online tracking on a GPU based filter farm. An implementation of the 3-dimensional multiple scattering fit based on hit triplets is described. The extension of the fit that takes into account energy losses and pixel size is used for offline track reconstruction. The algorithm and performance of the offline track reconstruction based on a full Geant4 simulation of the Mu3e detector are presented.

An Uneven Illumination Correction Algorithm for Optical Remote Sensing Images Covered with Thin Clouds

Directory of Open Access Journals (Sweden)

Xiaole Shen

2015-09-01

Full Text Available The uneven illumination phenomenon caused by thin clouds will reduce the quality of remote sensing images, and bring adverse effects to the image interpretation. To remove the effect of thin clouds on images, an uneven illumination correction can be applied. In this paper, an effective uneven illumination correction algorithm is proposed to remove the effect of thin clouds and to restore the ground information of the optical remote sensing image. The imaging model of remote sensing images covered by thin clouds is analyzed. Due to the transmission attenuation, reflection, and scattering, the thin cloud cover usually increases region brightness and reduces saturation and contrast of the image. As a result, a wavelet domain enhancement is performed for the image in Hue-Saturation-Value (HSV color space. We use images with thin clouds in Wuhan area captured by QuickBird and ZiYuan-3 (ZY-3 satellites for experiments. Three traditional uneven illumination correction algorithms, i.e., multi-scale Retinex (MSR algorithm, homomorphic filtering (HF-based algorithm, and wavelet transform-based MASK (WT-MASK algorithm are performed for comparison. Five indicators, i.e., mean value, standard deviation, information entropy, average gradient, and hue deviation index (HDI are used to analyze the effect of the algorithms. The experimental results show that the proposed algorithm can effectively eliminate the influences of thin clouds and restore the real color of ground objects under thin clouds.

3D Results in VTK with data for gravitational collapse of a molecular hydrogen cloud

International Nuclear Information System (INIS)

Duarte P, R.; Klapp E, J.

2007-01-01

With the objective of using free software for visualization, we experience with VTK (Visualization Toolkit) system guided to objects, using a VTK classes library, Tcl languages and PV-WAVE, to create an application and to produce some images in 3D with data of 3D coordinated points, in this case of a gravitational collapse of a cloud of molecular hydrogen. (Author)

Direct effects of casein phosphopeptides on growth and differentiation of in vitro cultured osteoblastic cells (MC3T3-E1).

Science.gov (United States)

Tulipano, Giovanni; Bulgari, Omar; Chessa, Stefania; Nardone, Alessandro; Cocchi, Daniela; Caroli, Anna

2010-02-25

Casein phosphopeptides (CPPs) obtained by enzymatic hydrolysis in vitro of caseins, have been shown to enhance calcium solubility and to increase the calcification of embryonic rat bones in their diaphyseal area. Little is known about the direct effects of CPPs on cultured osteoblastic cells. Calcium in the microenvironment surrounding bone cells is not only important for the mineralization of the extracellular matrix, but it is believed to provide preosteblasts with a signal that modulates their proliferation and differentiation. The aim of the present study was to investigate the direct effects of four selected casein phosphopeptides on osteoblastic cell (MC3T3-E1 cells) viability and differentiation. The selected peptides have been obtained by chemical synthesis and differed in the number of phosphorylated sites and in the amino acid spacing out two phosphorylated sites, in order to further characterize the relationship between structure and function. The results obtained in this work demonstrated that CPPs may directly affect osteoblast-like cell growth, calcium uptake and ultimately calcium deposition in the extracellular matrix. The effects exerted by distinct CPPs on osteogenesis in vitro can be either stimulatory or inhibitory. Differential short amino acid sequences in their molecules, like the -SpEE- and the -SpTSpEE-motifs, are likely the molecular determinants for their biological activities on osteoblastic cells. Moreover, two genetic variants of CPPs showing one amino acid change in their sequence may profoundly differ in their biological activities. Finally, our data may also suggest important clues about the role of intrinsic phosphorylated peptides derived from endogenous phosphorylated proteins in bone metabolism, apart from extrinsic CPPs. Copyright 2009 Elsevier B.V. All rights reserved.

On CLOUD nine

CERN Multimedia

2009-01-01

The team from the CLOUD experiment - the world’s first experiment using a high-energy particle accelerator to study the climate - were on cloud nine after the arrival of their new three-metre diameter cloud chamber. This marks the end of three years’ R&D and design, and the start of preparations for data taking later this year.

Improving HelioClim-3 estimates of surface solar irradiance using the McClear clear-sky model and recent advances in atmosphere composition

Directory of Open Access Journals (Sweden)

Z. Qu

2014-11-01

Full Text Available The HelioClim-3 database (HC3v3 provides records of surface solar irradiation every 15 min, estimated by processing images from the geostationary meteorological Meteosat satellites using climatological data sets of the atmospheric Linke turbidity factor. This technical note proposes a method to improve a posteriori HC3v3 by combining it with data records of the irradiation under clear skies from the new McClear clear-sky model, whose inputs are the advanced global aerosol property forecasts and physically consistent total column content in water vapour and ozone produced by the MACC (Monitoring Atmosphere Composition and Climate projects. The method is validated by comparison with a series of ground measurements for 15 min and 1 h for 6 stations and for daily irradiation for 23 stations. The correlation coefficient is large, greater than respectively 0.92, 0.94, and 0.97, for 15 min, 1 h and daily irradiation. The bias ranges from −4 to 4% of the mean observed irradiation for most sites. The relative root mean square difference (RMSD varies between 14 and 38% for 15 min, 12 and 33% for 1 h irradiation, and 6 and 20% for daily irradiation. As a rule of thumb, the farther from the nadir of the Meteosat satellite located at latitude 0° and longitude 0°, and the greater the occurrence of fragmented cloud cover, the greater the relative RMSD. The method improves HC3v3 in most cases, and with no degradation in the others. A systematic correction of HC3v3 with McClear is recommended.

Fast optical readout for Mu3e experiment

Energy Technology Data Exchange (ETDEWEB)

Huang, Qinhua [Institut fuer Kernphysik, Universitaet Mainz, Mainz (Germany); Collaboration: Mu3e-Collaboration

2016-07-01

Charged lepton flavour violation is highly suppressed in the Standard Model, which results in a prediction for the branching ratio of μ{sup +}→e{sup +}e{sup +}e{sup -} below O(10{sup -54}). The Mu3e experiment will search for this rare decay with a sensitivity of 10{sup -16}. An observation would be a clear sign for new physics. A high muon stopping rate of 2.10{sup 9} Hz is required so that sufficient statistics can be accumulated in about one year of data taking. The high event rate and the requirement of a full online track reconstruction demand a fast readout system which should provide a bandwidth above 1 Tbit/s. Reconfigurable devices, namely FPGAs, can easily parallelise the data processing, so it becomes possible to sort, merge, pack and route the data with low latency at high throughput. Optical fibres are the only option for the interconnection between different FPGA-based boards. The fibres also reduce the crosstalk and signal attenuation, especially over long distance links. As part of the readout system prototyping, firmware for synchronous merging of different data streams is being developed. In addition, the optical links have been tested and show a bit error rate below O(10{sup -16}) at 6.4 Gbit/s for a single fibre.

An Overview of the Lightning - Atmospheric Chemistry Aspects of the Deep Convective Clouds and Chemistry (DC3) Experiment

Science.gov (United States)

Pickering, K. E.; Barth, M. C.; Koshak, W.; Bucsela, E. J.; Allen, D. J.; Weinheimer, A.; Ryerson, T.; Huntrieser, H.; Bruning, E.; MacGorman, D.;

ACE-2 HILLCLOUD. An overview of the ACE-2 ground-based cloud experiment

DEFF Research Database (Denmark)

Bower, B.K.N.; Choularton, T.W.; Gallagher, M.W.

2000-01-01

the dependence of the cloud microphysics and chemistry on the characteristics of the aerosols and trace gases entering cloud, and to simultaneously study the influence of the physical and chemical processes occurring within the cloud on the size distribution, chemical and hygroscopic properties of the aerosol......) and higher aerosol mass loadings. Cloud droplet number concentrations N, increased from 50 cm-3 in background maritime air to >2500 cm-3 in aged polluted continental air, a concentration much higher than had previously been detected. Surprisingly, N was seen to vary almost linearly with aerosol number across...... were around 0.3 ppbv even in air originating over the ocean, another unexpected but important result for the region. NO2 was present in background concentrations of typically 15 pptv to 100 pptv and NO3. (the nitrate radical) was observed at night throughout. Calculations suggest NO3. losses were...

ATLAS WORLD-cloud and networking in PanDA

Science.gov (United States)

Barreiro Megino, F.; De, K.; Di Girolamo, A.; Maeno, T.; Walker, R.; ATLAS Collaboration

2017-10-01

The ATLAS computing model was originally designed as static clouds (usually national or geographical groupings of sites) around the Tier 1 centres, which confined tasks and most of the data traffic. Since those early days, the sites’ network bandwidth has increased at 0(1000) and the difference in functionalities between Tier 1s and Tier 2s has reduced. After years of manual, intermediate solutions, we have now ramped up to full usage of World-cloud, the latest step in the PanDA Workload Management System to increase resource utilization on the ATLAS Grid, for all workflows (MC production, data (re)processing, etc.). We have based the development on two new site concepts. Nuclei sites are the Tier 1s and large Tier 2s, where tasks will be assigned and the output aggregated, and satellites are the sites that will execute the jobs and send the output to their nucleus. PanDA dynamically pairs nuclei and satellite sites for each task based on the input data availability, capability matching, site load and network connectivity. This contribution will introduce the conceptual changes for World-cloud, the development necessary in PanDA, an insight into the network model and the first half-year of operational experience.

Secure Cloud-Based Solutions for Different eHealth Services in Spanish Rural Health Centers.

Science.gov (United States)

de la Torre-Díez, Isabel; Lopez-Coronado, Miguel; Garcia-Zapirain Soto, Begonya; Mendez-Zorrilla, Amaia

2015-07-27

The combination of eHealth applications and/or services with cloud technology provides health care staff—with sufficient mobility and accessibility for them—to be able to transparently check any data they may need without having to worry about its physical location. The main aim of this paper is to put forward secure cloud-based solutions for a range of eHealth services such as electronic health records (EHRs), telecardiology, teleconsultation, and telediagnosis. The scenario chosen for introducing the services is a set of four rural health centers located within the same Spanish region. iCanCloud software was used to perform simulations in the proposed scenario. We chose online traffic and the cost per unit in terms of time as the parameters for choosing the secure solution on the most optimum cloud for each service. We suggest that load balancers always be fitted for all solutions in communication together with several Internet service providers and that smartcards be used to maintain identity to an appropriate extent. The solutions offered via private cloud for EHRs, teleconsultation, and telediagnosis services require a volume of online traffic calculated at being able to reach 2 Gbps per consultation. This may entail an average cost of €500/month. The security solutions put forward for each eHealth service constitute an attempt to centralize all information on the cloud, thus offering greater accessibility to medical information in the case of EHRs alongside more reliable diagnoses and treatment for telecardiology, telediagnosis, and teleconsultation services. Therefore, better health care for the rural patient can be obtained at a reasonable cost.

Secure Cloud-Based Solutions for Different eHealth Services in Spanish Rural Health Centers

Science.gov (United States)

2015-01-01

Background The combination of eHealth applications and/or services with cloud technology provides health care staff—with sufficient mobility and accessibility for them—to be able to transparently check any data they may need without having to worry about its physical location. Objective The main aim of this paper is to put forward secure cloud-based solutions for a range of eHealth services such as electronic health records (EHRs), telecardiology, teleconsultation, and telediagnosis. Methods The scenario chosen for introducing the services is a set of four rural health centers located within the same Spanish region. iCanCloud software was used to perform simulations in the proposed scenario. We chose online traffic and the cost per unit in terms of time as the parameters for choosing the secure solution on the most optimum cloud for each service. Results We suggest that load balancers always be fitted for all solutions in communication together with several Internet service providers and that smartcards be used to maintain identity to an appropriate extent. The solutions offered via private cloud for EHRs, teleconsultation, and telediagnosis services require a volume of online traffic calculated at being able to reach 2 Gbps per consultation. This may entail an average cost of €500/month. Conclusions The security solutions put forward for each eHealth service constitute an attempt to centralize all information on the cloud, thus offering greater accessibility to medical information in the case of EHRs alongside more reliable diagnoses and treatment for telecardiology, telediagnosis, and teleconsultation services. Therefore, better health care for the rural patient can be obtained at a reasonable cost. PMID:26215155

Functional Characterization of MC1R-TUBB3 Intergenic Splice Variants of the Human Melanocortin 1 Receptor.

Directory of Open Access Journals (Sweden)

Cecilia Herraiz

Full Text Available The melanocortin 1 receptor gene (MC1R expressed in melanocytes is a major determinant of skin pigmentation. It encodes a Gs protein-coupled receptor activated by α-melanocyte stimulating hormone (αMSH. Human MC1R has an inefficient poly(A site allowing intergenic splicing with its downstream neighbour Tubulin-β-III (TUBB3. Intergenic splicing produces two MC1R isoforms, designated Iso1 and Iso2, bearing the complete seven transmembrane helices from MC1R fused to TUBB3-derived C-terminal extensions, in-frame for Iso1 and out-of-frame for Iso2. It has been reported that exposure to ultraviolet radiation (UVR might promote an isoform switch from canonical MC1R (MC1R-001 to the MC1R-TUBB3 chimeras, which might lead to novel phenotypes required for tanning. We expressed the Flag epitope-tagged intergenic isoforms in heterologous HEK293T cells and human melanoma cells, for functional characterization. Iso1 was expressed with the expected size. Iso2 yielded a doublet of Mr significantly lower than predicted, and impaired intracellular stability. Although Iso1- and Iso2 bound radiolabelled agonist with the same affinity as MC1R-001, their plasma membrane expression was strongly reduced. Decreased surface expression mostly resulted from aberrant forward trafficking, rather than high rates of endocytosis. Functional coupling of both isoforms to cAMP was lower than wild-type, but ERK activation upon binding of αMSH was unimpaired, suggesting imbalanced signaling from the splice variants. Heterodimerization of differentially labelled MC1R-001 with the splicing isoforms analyzed by co-immunoprecipitation was efficient and caused decreased surface expression of binding sites. Thus, UVR-induced MC1R isoforms might contribute to fine-tune the tanning response by modulating MC1R-001 availability and functional parameters.

EXPERIENCE OF THE ORGANIZATION OF VIRTUAL LABORATORIES ON THE BASIS OF TECHNOLOGIES OF CLOUD COMPUTING

Directory of Open Access Journals (Sweden)

V. Oleksyuk

2014-06-01

Full Text Available The article investigated the concept of «virtual laboratory». This paper describes models of deploying of cloud technologies in IT infrastructure. The hybrid model is most recent for higher educational institution. The author suggests private cloud platforms to deploying the virtual laboratory. This paper describes the experience of the deployment enterprise cloud in IT infrastructure of Department of Physics and Mathematics of Ternopil V. Hnatyuk National Pedagogical University. The object of the research are virtual laboratories as components of IT infrastructure of higher education. The subject of the research are clouds as base of deployment of the virtual laboratories. Conclusions. The use of cloud technologies in the development virtual laboratories of the is an actual and need of the development. The hybrid model is the most appropriate in the deployment of cloud infrastructure of higher educational institution. It is reasonable to use the private (Cloudstack, Eucalyptus, OpenStack cloud platform in the universities.

Pixel sensor evaluation and online event selection for the Mu3e experiment

Energy Technology Data Exchange (ETDEWEB)

Bruch, Dorothea vom

2017-10-27

Despite having survived numerous experimental tests, the standard model of particle physics is not a complete description of nature. The Mu3e experiment tests theories beyond the standard model by searching for the lepton flavour violating decay μ→e{sup +}e{sup -}e{sup +}, aiming at a branching ratio sensitivity of 2.10{sup -15} in a first phase of the experiment. A high precision magnetic spectrometer combined with scintillation detectors will measure the momenta, vertices and timing of the decay products of 1.10{sup 8} μ/s stopped on a target. In this work, a prototype of the high voltage monolithic active pixel sensor envisaged for the spectrometer was characterised. With an efficiency >99% and a time resolution of 14 ns, it meets the requirements imposed on the final sensor. Furthermore, an online signal selection process was developed and implemented on a graphics processing unit (GPU), keeping 98% of signal decays, while reducing the data rate of 80 Gbit/s by a factor of 140; resulting in a rate that can be stored to disk. With the computing performance achieved on the GPU, the selection process can run on the hardware planned for the experiment. Both the online selection and the silicon sensor are key aspects for the success of Mu3e.

AIRS-CloudSat cloud mask, radar reflectivities, and cloud classification matchups V3.2

Data.gov (United States)

National Aeronautics and Space Administration — This is AIRS-CloudSat collocated subset, in NetCDF 4 format. These data contain collocated: AIRS Level 1b radiances spectra, CloudSat radar reflectivities, and MODIS...

3D Viewer Platform of Cloud Clustering Management System: Google Map 3D

Science.gov (United States)

Choi, Sung-Ja; Lee, Gang-Soo

The new management system of framework for cloud envrionemnt is needed by the platfrom of convergence according to computing environments of changes. A ISV and small business model is hard to adapt management system of platform which is offered from super business. This article suggest the clustering management system of cloud computing envirionments for ISV and a man of enterprise in small business model. It applies the 3D viewer adapt from map3D & earth of google. It is called 3DV_CCMS as expand the CCMS[1].

Knockdown of Indian hedgehog protein induces an inhibition of cell growth and differentiation in osteoblast MC3T3‑E1 cells.

Science.gov (United States)

Deng, Ang; Zhang, Hongqi; Hu, Minyu; Liu, Shaohua; Gao, Qile; Wang, Yuxiang; Guo, Chaofeng

2017-12-01

Indian hedgehog protein (Ihh) is evolutionarily conserved and serves important roles in controlling the differentiation of progenitor cells into osteoblasts. Ihh null mutant mice exhibit a failure of osteoblast development in endochondral bone. Although studies have demonstrated that Ihh signaling is a potent local factor that regulates osteoblast differentiation, the specific transcription factors that determine osteoblast differentiation remain unclear. Further studies are required to determine the precise mechanism through which Ihh regulates osteoblast differentiation. In the present study, Ihh was knocked down in osteoblast MC3T3‑E1 cells using short hairpin RNA, to investigate the function of Ihh in osteoblast proliferation and differentiation and to examine the potential mechanism through which Ihh induces osteoblast apoptosis and cell cycle arrest. It was observed that the knockdown of Ihh induced a marked inhibition of cell growth and increased the apoptosis rate compared with the negative control osteoblasts. Downregulation of Ihh resulted in a cell cycle arrest at the G1 to S phase boundary in osteoblasts. In addition, the knockdown of Ihh decreased the alkaline phosphatase activity and mineral deposition of osteoblasts. The inhibitory roles of Ihh downregulation in osteoblast growth and differentiation may be associated with the transforming growth factor‑β/mothers against decapentaplegic homolog and tumor necrosis factor receptor superfamily member 11B/tumor necrosis factor ligand superfamily member 11 signaling pathways. Manipulating either Ihh expression or its signaling components may be of benefit for the treatment of skeletal diseases.

EA-MC Neutronic Calculations on IAEA ADS Benchmark 3.2

Energy Technology Data Exchange (ETDEWEB)

Dahlfors, Marcus [Uppsala Univ. (Sweden). Dept. of Radiation Sciences; Kadi, Yacine [CERN, Geneva (Switzerland). Emerging Energy Technologies

2006-01-15

The neutronics and the transmutation properties of the IAEA ADS benchmark 3.2 setup, the 'Yalina' experiment or ISTC project B-70, have been studied through an extensive amount of 3-D Monte Carlo calculations at CERN. The simulations were performed with the state-of-the-art computer code package EA-MC, developed at CERN. The calculational approach is outlined and the results are presented in accordance with the guidelines given in the benchmark description. A variety of experimental conditions and parameters are examined; three different fuel rod configurations and three types of neutron sources are applied to the system. Reactivity change effects introduced by removal of fuel rods in both central and peripheral positions are also computed. Irradiation samples located in a total of 8 geometrical positions are examined. Calculations of capture reaction rates in {sup 129}I, {sup 237}Np and {sup 243}Am samples and of fission reaction rates in {sup 235}U, {sup 237}Np and {sup 243}Am samples are presented. Simulated neutron flux densities and energy spectra as well as spectral indices inside experimental channels are also given according to benchmark specifications. Two different nuclear data libraries, JAR-95 and JENDL-3.2, are applied for the calculations.

Cloud type comparisons of AIRS, CloudSat, and CALIPSO cloud height and amount

Directory of Open Access Journals (Sweden)

B. H. Kahn

2008-03-01

Full Text Available The precision of the two-layer cloud height fields derived from the Atmospheric Infrared Sounder (AIRS is explored and quantified for a five-day set of observations. Coincident profiles of vertical cloud structure by CloudSat, a 94 GHz profiling radar, and the Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO, are compared to AIRS for a wide range of cloud types. Bias and variability in cloud height differences are shown to have dependence on cloud type, height, and amount, as well as whether CloudSat or CALIPSO is used as the comparison standard. The CloudSat-AIRS biases and variability range from −4.3 to 0.5±1.2–3.6 km for all cloud types. Likewise, the CALIPSO-AIRS biases range from 0.6–3.0±1.2–3.6 km (−5.8 to −0.2±0.5–2.7 km for clouds ≥7 km (<7 km. The upper layer of AIRS has the greatest sensitivity to Altocumulus, Altostratus, Cirrus, Cumulonimbus, and Nimbostratus, whereas the lower layer has the greatest sensitivity to Cumulus and Stratocumulus. Although the bias and variability generally decrease with increasing cloud amount, the ability of AIRS to constrain cloud occurrence, height, and amount is demonstrated across all cloud types for many geophysical conditions. In particular, skill is demonstrated for thin Cirrus, as well as some Cumulus and Stratocumulus, cloud types infrared sounders typically struggle to quantify. Furthermore, some improvements in the AIRS Version 5 operational retrieval algorithm are demonstrated. However, limitations in AIRS cloud retrievals are also revealed, including the existence of spurious Cirrus near the tropopause and low cloud layers within Cumulonimbus and Nimbostratus clouds. Likely causes of spurious clouds are identified and the potential for further improvement is discussed.

Engaging observers to look at clouds from both sides: connecting NASA mission science with authentic STEM experiences

Science.gov (United States)

Chambers, L. H.; Taylor, J.; Ellis, T. D.; McCrea, S.; Rogerson, T. M.; Falcon, P.

2016-12-01

In 1997, NASA's Clouds and the Earth's Radiant Energy System (CERES) team began engaging K-12 schools as ground truth observers of clouds. CERES seeks to understand cloud effects on Earth's energy budget; thus accurate detection and characterization of clouds is key. While satellite remote sensing provides global information about clouds, it is limited in time and resolution. Ground observers, on the other hand, can observe clouds at any time of day (and sometimes night), and can see small and thin clouds that are challenging to detect from space. In 2006, two active sensing satellites, CloudSat and CALIPSO, were launched into the A-Train, which already contained 2 CERES instruments on the Aqua spacecraft. The CloudSat team also engaged K-12 schools to observe clouds, through The GLOBE Program, with a specialized observation protocol customized for the narrow radar swath. While providing valuable data for satellite assessment, these activities also engage participants in accessible, authentic science that gets people outdoors, helps them develop observation skills, and is friendly to all ages. The effort has evolved substantially since 1997, adopting new technology to provide a more compelling experience to citizen observers. Those who report within 15 minutes of the passage of a wide range of satellites (Terra, Aqua, CloudSat, CALIPSO, NPP, as well as a number of geostationary satellites) are sent a satellite image centered on their location and are invited to extend the experience beyond simple observation to include analysis of the two different viewpoints. Over the years these projects have collected large amounts of cloud observations from every continent and ocean basin on Earth. A number of studies have been conducted comparing the ground observations to the satellite results. This presentation will provide an overview of those results and also describe plans for a coordinated, thematic cloud observation and data analysis activity going forward.

Interaction of Supernova Blast Waves with Interstellar Clouds: Experiments on the Omega Laser

International Nuclear Information System (INIS)

Klein, R.I.; Robey, H.F.; Perry, T.S.; Kane, J.O.; Greenough, J.A.; Marinak, M.M.

2001-01-01

The interaction of strong shock waves, such as those generated by the explosion of supernovae with interstellar clouds, is a problem of fundamental importance in understanding the evolution and the dynamics of the interstellar medium (ISM) as it is disrupted by shock waves. The physics of this essential interaction is critical to understanding the evolution of the ISM, the mixing of interstellar clouds with the ISM and the viability of this mechanism for triggered star formation. Here we present the results of a series of new OMEGA laser experiments investigating the evolution of a high density sphere embedded in a low density medium after the interaction of a strong shock wave, thereby emulating the supernova shock-cloud interaction. The interaction is viewed from two orthogonal directions enabling visualization of the both the initial distortion of the sphere into a vortex ring as well as the onset of an azimuthal instability that ultimately results in the three-dimensional breakup of the ring. These studies augment previous studies [1,2] on the NOVA laser by enabling the full three-dimensional topology of the interaction to be understood. We show that the experimental results for the vortex ring are in remarkable agreement with the incompressible theory of Widnall [3]. Implications for mixing in the ISM are discussed

Copper benchmark experiment for the testing of JEFF-3.2 nuclear data for fusion applications

Directory of Open Access Journals (Sweden)

Angelone M.

2017-01-01

Full Text Available A neutronics benchmark experiment on a pure Copper block (dimensions 60 × 70 × 70 cm3 aimed at testing and validating the recent nuclear data libraries for fusion applications was performed in the frame of the European Fusion Program at the 14 MeV ENEA Frascati Neutron Generator (FNG. Reaction rates, neutron flux spectra and doses were measured using different experimental techniques (e.g. activation foils techniques, NE213 scintillator and thermoluminescent detectors. This paper first summarizes the analyses of the experiment carried-out using the MCNP5 Monte Carlo code and the European JEFF-3.2 library. Large discrepancies between calculation (C and experiment (E were found for the reaction rates both in the high and low neutron energy range. The analysis was complemented by sensitivity/uncertainty analyses (S/U using the deterministic and Monte Carlo SUSD3D and MCSEN codes, respectively. The S/U analyses enabled to identify the cross sections and energy ranges which are mostly affecting the calculated responses. The largest discrepancy among the C/E values was observed for the thermal (capture reactions indicating severe deficiencies in the 63,65Cu capture and elastic cross sections at lower rather than at high energy. Deterministic and MC codes produced similar results. The 14 MeV copper experiment and its analysis thus calls for a revision of the JEFF-3.2 copper cross section and covariance data evaluation. A new analysis of the experiment was performed with the MCNP5 code using the revised JEFF-3.3-T2 library released by NEA and a new, not yet distributed, revised JEFF-3.2 Cu evaluation produced by KIT. A noticeable improvement of the C/E results was obtained with both new libraries.

Copper benchmark experiment for the testing of JEFF-3.2 nuclear data for fusion applications

Science.gov (United States)

Angelone, M.; Flammini, D.; Loreti, S.; Moro, F.; Pillon, M.; Villar, R.; Klix, A.; Fischer, U.; Kodeli, I.; Perel, R. L.; Pohorecky, W.

2017-09-01

A neutronics benchmark experiment on a pure Copper block (dimensions 60 × 70 × 70 cm3) aimed at testing and validating the recent nuclear data libraries for fusion applications was performed in the frame of the European Fusion Program at the 14 MeV ENEA Frascati Neutron Generator (FNG). Reaction rates, neutron flux spectra and doses were measured using different experimental techniques (e.g. activation foils techniques, NE213 scintillator and thermoluminescent detectors). This paper first summarizes the analyses of the experiment carried-out using the MCNP5 Monte Carlo code and the European JEFF-3.2 library. Large discrepancies between calculation (C) and experiment (E) were found for the reaction rates both in the high and low neutron energy range. The analysis was complemented by sensitivity/uncertainty analyses (S/U) using the deterministic and Monte Carlo SUSD3D and MCSEN codes, respectively. The S/U analyses enabled to identify the cross sections and energy ranges which are mostly affecting the calculated responses. The largest discrepancy among the C/E values was observed for the thermal (capture) reactions indicating severe deficiencies in the 63,65Cu capture and elastic cross sections at lower rather than at high energy. Deterministic and MC codes produced similar results. The 14 MeV copper experiment and its analysis thus calls for a revision of the JEFF-3.2 copper cross section and covariance data evaluation. A new analysis of the experiment was performed with the MCNP5 code using the revised JEFF-3.3-T2 library released by NEA and a new, not yet distributed, revised JEFF-3.2 Cu evaluation produced by KIT. A noticeable improvement of the C/E results was obtained with both new libraries.