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Sample records for circularly permuted fluorescent

  1. Expression of linear permutated variants from circular enterocin AS-48

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    Montalbán-López, Manuel; Martínez-Bueno, Manuel; Valdivia, Eva; Maqueda, Mercedes

    2011-01-01

    To confirm whether the head-to-tail circularization could be involved in the stability and activity of the circular bacteriocin AS-48, two permutated linear structural as-48A genes have been constructed by circular permutation. The absence of the leaderless linear AS(23/24) and AS(48/49) proteins in

  2. Modified Hill Cipher with Key Dependent Permutation and Circular Rotation

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    V. U.K. Sastry

    2007-01-01

    Full Text Available In this study, we have modified the Hill cipher, by including a permutation and circular rotation into the cipher. Here both the permutation and the rotation depend upon the key. From the cryptanalysis and the avalanche effect, discussed in this study, we notice that the strength of the cipher is significant.

  3. Probing the functional mechanism of Escherichia coli GroEL using circular permutation.

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    Tomohiro Mizobata

    Full Text Available BACKGROUND: The Escherichia coli chaperonin GroEL subunit consists of three domains linked via two hinge regions, and each domain is responsible for a specific role in the functional mechanism. Here, we have used circular permutation to study the structural and functional characteristics of the GroEL subunit. METHODOLOGY/PRINCIPAL FINDINGS: Three soluble, partially active mutants with polypeptide ends relocated into various positions of the apical domain of GroEL were isolated and studied. The basic functional hallmarks of GroEL (ATPase and chaperoning activities were retained in all three mutants. Certain functional characteristics, such as basal ATPase activity and ATPase inhibition by the cochaperonin GroES, differed in the mutants while at the same time, the ability to facilitate the refolding of rhodanese was roughly equal. Stopped-flow fluorescence experiments using a fluorescent variant of the circularly permuted GroEL CP376 revealed that a specific kinetic transition that reflects movements of the apical domain was missing in this mutant. This mutant also displayed several characteristics that suggested that the apical domains were behaving in an uncoordinated fashion. CONCLUSIONS/SIGNIFICANCE: The loss of apical domain coordination and a concomitant decrease in functional ability highlights the importance of certain conformational signals that are relayed through domain interlinks in GroEL. We propose that circular permutation is a very versatile tool to probe chaperonin structure and function.

  4. Circular permutation of a synthetic eukaryotic chromosome with the telomerator

    Science.gov (United States)

    Mitchell, Leslie A.; Boeke, Jef D.

    2014-01-01

    Chromosome engineering is a major focus in the fields of systems biology, genetics, synthetic biology, and the functional analysis of genomes. Here, we describe the “telomerator,” a new synthetic biology device for use in Saccharomyces cerevisiae. The telomerator is designed to inducibly convert circular DNA molecules into mitotically stable, linear chromosomes replete with functional telomeres in vivo. The telomerator cassette encodes convergent yeast telomere seed sequences flanking the I-SceI homing endonuclease recognition site in the center of an intron artificially transplanted into the URA3 selectable/counterselectable auxotrophic marker. We show that inducible expression of the homing endonuclease efficiently generates linear molecules, identified by using a simple plate-based screening method. To showcase its functionality and utility, we use the telomerator to circularly permute a synthetic yeast chromosome originally constructed as a circular molecule, synIXR, to generate 51 linear variants. Many of the derived linear chromosomes confer unexpected phenotypic properties. This finding indicates that the telomerator offers a new way to study the effects of gene placement on chromosomes (i.e., telomere proximity). However, that the majority of synIXR linear derivatives support viability highlights inherent tolerance of S. cerevisiae to changes in gene order and overall chromosome structure. The telomerator serves as an important tool to construct artificial linear chromosomes in yeast; the concept can be extended to other eukaryotes. PMID:25378705

  5. Ancestral Protein Reconstruction and Circular Permutation for Improving the Stability and Dynamic Range of FRET Sensors.

    Science.gov (United States)

    Clifton, Ben E; Whitfield, Jason H; Sanchez-Romero, Inmaculada; Herde, Michel K; Henneberger, Christian; Janovjak, Harald; Jackson, Colin J

    2017-01-01

    Small molecule biosensors based on Förster resonance energy transfer (FRET) enable small molecule signaling to be monitored with high spatial and temporal resolution in complex cellular environments. FRET sensors can be constructed by fusing a pair of fluorescent proteins to a suitable recognition domain, such as a member of the solute-binding protein (SBP) superfamily. However, naturally occurring SBPs may be unsuitable for incorporation into FRET sensors due to their low thermostability, which may preclude imaging under physiological conditions, or because the positions of their N- and C-termini may be suboptimal for fusion of fluorescent proteins, which may limit the dynamic range of the resulting sensors. Here, we show how these problems can be overcome using ancestral protein reconstruction and circular permutation. Ancestral protein reconstruction, used as a protein engineering strategy, leverages phylogenetic information to improve the thermostability of proteins, while circular permutation enables the termini of an SBP to be repositioned to maximize the dynamic range of the resulting FRET sensor. We also provide a protocol for cloning the engineered SBPs into FRET sensor constructs using Golden Gate assembly and discuss considerations for in situ characterization of the FRET sensors.

  6. Circularly permuted tRNA genes: their expression and implications for their physiological relevance and development.

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    Akiko eSoma

    2014-04-01

    Full Text Available A number of genome analyses and searches using programs that focus on the RNA-specific bulge-helix-bulge (BHB motif have uncovered a wide variety of disrupted tRNA genes. The results of these analyses have shown that genetic information encoding functional RNAs is described in the genome cryptically and is retrieved using various strategies. One such strategy is represented by circularly permuted tRNA genes, in which the sequences encoding the 5′-half and 3′-half of the specific tRNA are separated and inverted on the genome. Biochemical analyses have defined a processing pathway in which the termini of tRNA precursors (pre-tRNAs are ligated to form a characteristic circular RNA intermediate, which is then cleaved at the acceptor-stem to generate the typical cloverleaf structure with functional termini. The sequences adjacent to the processing site located between the 3′-half and the 5′-half of pre-tRNAs potentially form a BHB motif, which is the dominant recognition site for the tRNA-intron splicing endonuclease, suggesting that circularization of pre-tRNAs depends on the splicing machinery. Some permuted tRNAs contain a BHB-mediated intron in their 5′- or 3′-half, meaning that removal of an intron, as well as swapping of the 5′- and 3′-halves, are required during maturation of their pre-tRNAs. To date, 34 permuted tRNA genes have been identified from six species of unicellular algae and one archaeon. Although their physiological significance and mechanism of development remain unclear, the splicing system of BHB motifs seems to have played a key role in the formation of permuted tRNA genes. In this review, current knowledge of circularly permuted tRNA genes is presented and some unanswered questions regarding these species are discussed.

  7. Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin

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    Le Trong, Isolde [University of Washington, Box 357420, Seattle, WA 98195-7420 (United States); University of Washington, Box 357742, Seattle, WA 98195-7742 (United States); Chu, Vano [University of Washington, Box 355061, Seattle, WA 98195-5061 (United States); Xing, Yi [University of Washington, Box 357420, Seattle, WA 98195-7420 (United States); Lybrand, Terry P. [Vanderbilt University, 5142 Medical Research Building III, 465 21st Avenue South, Nashville, TN 37232-8725 (United States); Stayton, Patrick S. [University of Washington, Box 355061, Seattle, WA 98195-5061 (United States); Stenkamp, Ronald E., E-mail: stenkamp@u.washington.edu [University of Washington, Box 357420, Seattle, WA 98195-7420 (United States); University of Washington, Box 357742, Seattle, WA 98195-7742 (United States); University of Washington, Box 357430, Seattle, WA 98195-7430 (United States)

    2013-06-01

    The crystal structures of two circularly permuted streptavidins probe the role of a flexible loop in the tight binding of biotin. Molecular-dynamics calculations for one of the mutants suggests that increased fluctuations in a hydrogen bond between the protein and biotin are associated with cleavage of the binding loop. Circular permutation of streptavidin was carried out in order to investigate the role of a main-chain amide in stabilizing the high-affinity complex of the protein and biotin. Mutant proteins CP49/48 and CP50/49 were constructed to place new N-termini at residues 49 and 50 in a flexible loop involved in stabilizing the biotin complex. Crystal structures of the two mutants show that half of each loop closes over the binding site, as observed in wild-type streptavidin, while the other half adopts the open conformation found in the unliganded state. The structures are consistent with kinetic and thermodynamic data and indicate that the loop plays a role in enthalpic stabilization of the bound state via the Asn49 amide–biotin hydrogen bond. In wild-type streptavidin, the entropic penalties of immobilizing a flexible portion of the protein to enhance binding are kept to a manageable level by using a contiguous loop of medium length (six residues) which is already constrained by its anchorage to strands of the β-barrel protein. A molecular-dynamics simulation for CP50/49 shows that cleavage of the binding loop results in increased structural fluctuations for Ser45 and that these fluctuations destabilize the streptavidin–biotin complex.

  8. BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations.

    Science.gov (United States)

    Bahr, A; Thompson, J D; Thierry, J C; Poch, O

    2001-01-01

    BAliBASE is specifically designed to serve as an evaluation resource to address all the problems encountered when aligning complete sequences. The database contains high quality, manually constructed multiple sequence alignments together with detailed annotations. The alignments are all based on three-dimensional structural superpositions, with the exception of the transmembrane sequences. The first release provided sets of reference alignments dealing with the problems of high variability, unequal repartition and large N/C-terminal extensions and internal insertions. Here we describe version 2.0 of the database, which incorporates three new reference sets of alignments containing structural repeats, trans-membrane sequences and circular permutations to evaluate the accuracy of detection/prediction and alignment of these complex sequences. BAliBASE can be viewed at the web site http://www-igbmc.u-strasbg. fr/BioInfo/BAliBASE2/index.html or can be downloaded from ftp://ftp-igbmc.u-strasbg.fr/pub/BAliBASE2 /.

  9. Engineering allosteric regulation into the hinge region of a circularly permuted TEM-1 beta-lactamase.

    Science.gov (United States)

    Mathieu, Valéry; Fastrez, Jacques; Soumillion, Patrice

    2010-09-01

    In nature, the activity of many enzymes involved in important biochemical pathways is controlled by binding a ligand in a site remote from the active site. The allosteric sites are frequently located in hinge regulatory subunits, in which a conformational change can occur and propagate to the active site. The enzymatic activity is then enhanced or decreased depending on the type of effectors. Many artificial binding sites have been created to engineer an allosteric regulation. Generally, these sites were engineered near the active site in loops or at the surface of contiguous helices or strands but rarely in hinge regions. This work aims at exploring the possibility of regulating a monomeric enzyme whose active site is located at the interface between two domains. We anticipated that binding of a ligand in the hinge region linking the domains would modify their positioning and, consequently, modulate the activity. Here, we describe the design of two mutants in a circularly permuted TEM-1 (cpTEM-1) beta-lactamase. The first one, cpTEM-1-His(3) was created by a rational design. It shows little regulation upon metal ion binding except for a weak activation with Zn(2+). The second one, cpTEM-1-3M-His(2), was selected by a directed evolution strategy. It is allosterically down-regulated by Zn(2+), Ni(2+) and Co(2+) with binding affinities around 300 microM.

  10. Circular permutation prediction reveals a viable backbone disconnection for split proteins: an approach in identifying a new functional split intein.

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    Yun-Tzai Lee

    Full Text Available Split-protein systems have emerged as a powerful tool for detecting biomolecular interactions and reporting biological reactions. However, reliable methods for identifying viable split sites are still unavailable. In this study, we demonstrated the feasibility that valid circular permutation (CP sites in proteins have the potential to act as split sites and that CP prediction can be used to search for internal permissive sites for creating new split proteins. Using a protein ligase, intein, as a model, CP predictor facilitated the creation of circular permutants in which backbone opening imposes the least detrimental effects on intein folding. We screened a series of predicted intein CPs and identified stable and native-fold CPs. When the valid CP sites were introduced as split sites, there was a reduction in folding enthalpy caused by the new backbone opening; however, the coincident loss in entropy was sufficient to be compensated, yielding a favorable free energy for self-association. Since split intein is exploited in protein semi-synthesis, we tested the related protein trans-splicing (PTS activities of the corresponding split inteins. Notably, a novel functional split intein composed of the N-terminal 36 residues combined with the remaining C-terminal fragment was identified. Its PTS activity was shown to be better than current reported two-piece intein with a short N-terminal segment. Thus, the incorporation of in silico CP prediction facilitated the design of split intein as well as circular permutants.

  11. Structural analysis of papain-like NlpC/P60 superfamily enzymes with a circularly permuted topology reveals potential lipid binding sites.

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    Qingping Xu

    Full Text Available NlpC/P60 superfamily papain-like enzymes play important roles in all kingdoms of life. Two members of this superfamily, LRAT-like and YaeF/YiiX-like families, were predicted to contain a catalytic domain that is circularly permuted such that the catalytic cysteine is located near the C-terminus, instead of at the N-terminus. These permuted enzymes are widespread in virus, pathogenic bacteria, and eukaryotes. We determined the crystal structure of a member of the YaeF/YiiX-like family from Bacillus cereus in complex with lysine. The structure, which adopts a ligand-induced, "closed" conformation, confirms the circular permutation of catalytic residues. A comparative analysis of other related protein structures within the NlpC/P60 superfamily is presented. Permutated NlpC/P60 enzymes contain a similar conserved core and arrangement of catalytic residues, including a Cys/His-containing triad and an additional conserved tyrosine. More surprisingly, permuted enzymes have a hydrophobic S1 binding pocket that is distinct from previously characterized enzymes in the family, indicative of novel substrate specificity. Further analysis of a structural homolog, YiiX (PDB 2if6 identified a fatty acid in the conserved hydrophobic pocket, thus providing additional insights into possible function of these novel enzymes.

  12. Structural Analysis of Papain-Like NlpC/P60 Superfamily Enzymes with a Circularly Permuted Topology Reveals Potential Lipid Binding Sites

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    Xu, Qingping; Rawlings, Neil D.; Chiu, Hsiu-Ju; Jaroszewski, Lukasz; Klock, Heath E.; Knuth, Mark W.; Miller, Mitchell D.; Elsliger, Marc-Andre; Deacon, Ashley M.; Godzik, Adam; Lesley, Scott A.; Wilson, Ian A. (SG); (Wellcome)

    2012-07-11

    NlpC/P60 superfamily papain-like enzymes play important roles in all kingdoms of life. Two members of this superfamily, LRAT-like and YaeF/YiiX-like families, were predicted to contain a catalytic domain that is circularly permuted such that the catalytic cysteine is located near the C-terminus, instead of at the N-terminus. These permuted enzymes are widespread in virus, pathogenic bacteria, and eukaryotes. We determined the crystal structure of a member of the YaeF/YiiX-like family from Bacillus cereus in complex with lysine. The structure, which adopts a ligand-induced, 'closed' conformation, confirms the circular permutation of catalytic residues. A comparative analysis of other related protein structures within the NlpC/P60 superfamily is presented. Permutated NlpC/P60 enzymes contain a similar conserved core and arrangement of catalytic residues, including a Cys/His-containing triad and an additional conserved tyrosine. More surprisingly, permuted enzymes have a hydrophobic S1 binding pocket that is distinct from previously characterized enzymes in the family, indicative of novel substrate specificity. Further analysis of a structural homolog, YiiX (PDB 2if6) identified a fatty acid in the conserved hydrophobic pocket, thus providing additional insights into possible function of these novel enzymes.

  13. SIMULTANEOUS MEASUREMENT OF CIRCULAR DICHROISM AND FLUORESCENCE POLARIZATION ANISOTROPY.

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    SUTHERLAND,J.C.

    2002-01-19

    Circular dichroism and fluorescence polarization anisotropy are important tools for characterizing biomolecular systems. Both are used extensively in kinetic experiments involving stopped- or continuous flow systems as well as titrations and steady-state spectroscopy. This paper presents the theory for determining circular dichroism and fluorescence polarization anisotropy simultaneously, thus insuring the two parameters are recorded under exactly the same conditions and at exactly the same time in kinetic experiments. The approach to measuring circular dichroism is that used in almost all conventional dichrographs. Two arrangements for measuring fluorescence polarization anisotropy are described. One uses a single fluorescence detector and signal processing with a lock-in amplifier that is similar to the measurement of circular dichroism. The second approach uses classic ''T'' format detection optics, and thus can be used with conventional photon-counting detection electronics. Simple extensions permit the simultaneous measurement of the absorption and excitation intensity corrected fluorescence intensity.

  14. Cyanobacterial phycobilisomes: selective dissociation monitored by fluorescence and circular dichroism

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    Rigbi, M.; Rosinski, J.; Siegelman, H.W.; Sutherland, J.C.

    1980-04-01

    Phycobilisomes are supramolecular assemblies of phycobiliproteins responsible for photosynthetic light collection in red algae and cyanobacteria. They can be selectively dissociated by reduction of temperature and buffer concentration. Phycobilisomes isolated from Fremyella diplosiphon transfer energy collected by C-phycoerythrin and C-phycocyanin to allophycocyanin. The energy transfer to allophycocyanin is nearly abolished at 2/sup 0/C, as indicated by a blue shift in fluorescence emission, and is accompanied by a decrease in the circular dichroism in the region of allophycocyanin absorbance. Further dissociation of the phycobilisomes can be attained by reduction of buffer concentration and holding at 2/sup 0/C. Energy transfer to C-phycocyanin is nearly abolished, and decreases occur in the circular dichroism in the region of C-phycocyanin and C-phycoerythrin absorbance. Complete dissociation of the phycobilisomes at low buffer concentration and 2/sup 0/C requires extended time. Energy transfer to C-phycocyanin is further reduced and the circular dichroism maximum of C-phycoerythrin at 575 nm is lost. Circular dichroism provides information on the hexamer-monomer transitions of the phycobiliproteins, whereas fluorescence is indicative of hexamer-hexamer interactions. We consider that hydrophobic interactions are fundamental to the maintenance of the structure and function of phycobilisomes.

  15. Permuting operations on strings: Their permutations and their primes

    NARCIS (Netherlands)

    Asveld, Peter R.J.

    2009-01-01

    We study some length-preserving operations on strings that permute the symbol positions in strings. These operations include some well-known examples (reversal, circular or cyclic shift, shuffle, twist, operations induced by the Josephus problem) and some new ones based on Archimedes spiral. Such

  16. Permutation orbifolds

    CERN Document Server

    Bántay, P

    2002-01-01

    A general theory of permutation orbifolds is developed for arbitrary twist groups. Explicit expressions for the number of primaries, the partition function, the genus one characters, the matrix elements of modular transformations and for fusion rule coefficients are presented, together with the relevant mathematical concepts, such as Lambda-matrices and twisted dimensions. The arithmetic restrictions implied by the theory for the allowed modular representations in CFT are discussed. The simplest nonabelian example with twist group S_3 is described to illustrate the general theory.

  17. Stability of some Cactaceae proteins based on fluorescence, circular dichroism, and differential scanning calorimetry measurements.

    Science.gov (United States)

    Gorinstein, S; Zemser, M; Vargas-Albores, F; Ochoa, J L; Paredes-Lopez, O; Scheler, C; Aksu, S; Salnikow, J

    1999-02-01

    Characterization of three cactus proteins (native and denatured) from Machaerocereus gummosus (Pitahaya agria), Lophocereu schottii (Garambullo), and Cholla opuntia (Cholla), was based on electrophoretic, fluorescence, CD (circular dichroism), DSC (differential scanning calorimetry), and FT-IR (Fourier transform infrared) measurements. The obtained results of intrinsic fluorescence, DSC, and CD were dissimilar for the three species of cactus, providing evidence of differences in secondary and tertiary structures. Cactus proteins may be situated in the following order corresponding to their relative stability: Machaerocereus gummosus (Pitahaya agria) > Cholla opuntia (Cholla) > Lophocereu schottii (Garambullo). Thermodynamic properties of proteins and their changes upon denaturation (temperature of denaturation, enthalphy, and the number of ruptured hydrogen bonds) were correlated with the secondary structure of proteins and disappearance of alpha-helix.

  18. Combinatorics of permutations

    CERN Document Server

    Bona, Miklos

    2004-01-01

    WINNER of a CHOICE Outstanding Academic Title Award for 2006!As linear orders, as elements of the symmetric group, modeled by matrices, modeled by graphs…permutations are omnipresent in modern combinatorics. They are omnipresent but also multifaceted, and while several excellent books explore particular aspects of the subject, no one book has covered them all. Even the classic results are scattered in various resources.Combinatorics of Permutations offers the first comprehensive, up to date treatment of both enumerative and extremal combinatorics and looks at permutation as linear orders and a

  19. Permutations and quantum entanglement

    Energy Technology Data Exchange (ETDEWEB)

    Chruscinski, D; Kossakowski, A [Institute of Physics, Nicolaus Copernicus University, Grudziadzka 5/7, 87-100 Torun (Poland)], E-mail: darch@fizyka.umk.pl, E-mail: kossak@fizyka.umk.pl

    2008-03-01

    We construct a large class of quantum dxd states which are positive under partial transposition (so called PPT states). The construction is based on certain direct sum decomposition of the total Hilbert space which is governed by by cyclic permutation from the symmetric group S{sub d-i}. It turns out that partial transposition maps any such decomposition into another one corresponding to 'complementary' permutation. This class contains many well known examples of PPT states from the literature and gives rise to a huge family of completely new states.

  20. Permutations and quantum entanglement

    Science.gov (United States)

    Chruściński, D.; Kossakowski, A.

    2008-03-01

    We construct a large class of quantum dotimesd states which are positive under partial transposition (so called PPT states). The construction is based on certain direct sum decomposition of the total Hilbert space which is governed by by cyclic permutation from the symmetric group Sd-i. It turns out that partial transposition maps any such decomposition into another one corresponding to 'complementary' permutation. This class contains many well known examples of PPT states from the literature and gives rise to a huge family of completely new states.

  1. On the tensor Permutation Matrices

    CERN Document Server

    Rakotonirina, Christian

    2011-01-01

    A property that tensor permutation matrices permutate tensor product of rectangle matrices is shown. Some examples, in the particular case of tensor commutation matrices, for studying some linear matricial equations are given.

  2. Integrated platform with magnetic purification and rolling circular amplification for sensitive fluorescent detection of ochratoxin A.

    Science.gov (United States)

    Yao, Li; Chen, Yinji; Teng, Jun; Zheng, Wanli; Wu, Jingjing; Adeloju, Samuel B; Pan, Daodong; Chen, Wei

    2015-12-15

    In this article, we report the detection of ochratoxin A (OTA) with excellent sensitivity with the two-aspect signal amplification treatments. Combining the unique property of magnetic nanoparticles and the high efficiency of the in vitro amplification of rolling circular amplification (RCA), the competitive sensing protocol for ultrasensitive detection of OTA was achieved in about 80 min. The excellent magnetic separation treatment could effectively avoid the interference of background fluorescent noise in the sensing system while the RCA could tremendously increase the hybridization sequence for the quantum dot labeled probes and further increase the sensing response signal. Afterwards, two factors affecting the final detection limit, concentration of RCA components and RCA reaction time, were all systematically optimized for the best sensing performance. The response of the optimized protocol for OTA detection is highly linear over the wider range from 10(-3) to 10 ppb, which is 3 orders improvement in sensing range, and the limit of detection is calculated to be as low as 0.13 ppt, which is 10,000 folds improvement compared with the traditional methods. More importantly, given the selected aptamer, this universal signal amplification protocol could be widely applied to other fields by just change the recognition sequence of the aptamer.

  3. Permutationally invariant state reconstruction

    CERN Document Server

    Moroder, Tobias; Toth, Geza; Schwemmer, Christian; Niggebaum, Alexander; Gaile, Stefanie; Gühne, Otfried; Weinfurter, Harald

    2012-01-01

    Feasible tomography schemes for large particle numbers must possess, besides an appropriate data acquisition protocol, also an efficient way to reconstruct the density operator from the observed finite data set. Since state reconstruction typically requires the solution of a non-linear large-scale optimization problem, this is a major challenge in the design of scalable tomography schemes. Here we present an efficient state reconstruction scheme for permutationally invariant quantum state tomography. It works for all common state-of-the-art reconstruction principles, including, in particular, maximum likelihood and least squares methods, which are the preferred choices in today's experiments. This high efficiency is achieved by greatly reducing the dimensionality of the problem employing a particular representation of permutationally invariant states known from spin coupling combined with convex optimization, which has clear advantages regarding speed, control and accuracy in comparison to commonly employed n...

  4. Interaction of fisetin with human serum albumin by fluorescence, circular dichroism spectroscopy and DFT calculations: binding parameters and conformational changes

    Energy Technology Data Exchange (ETDEWEB)

    Matei, Iulia; Ionescu, Sorana [Department of Physical Chemistry, Faculty of Chemistry, University of Bucharest, Bd. Regina Elisabeta 4-12, 030018 Bucharest (Romania); Hillebrand, Mihaela, E-mail: mihh@gw-chimie.math.unibuc.ro [Department of Physical Chemistry, Faculty of Chemistry, University of Bucharest, Bd. Regina Elisabeta 4-12, 030018 Bucharest (Romania)

    2011-08-15

    The interaction between fisetin, an antioxidant and neuroprotective flavonoid, and human serum albumin (HSA) is investigated by means of fluorescence (steady-state, synchronous, time-resolved) and circular dichroism (CD) spectroscopy. The formation of a 1:1 complex with a constant of about 10{sup 5} M{sup -1} was evidenced. Foerster's resonance energy transfer and competitive binding with site markers warfarin and ibuprofen were considered and discussed. Changes in the CD band of HSA indicate a decrease in the {alpha}-helix content upon binding. An induced CD signal for bound fisetin was observed and rationalized in terms of density functional theory calculations. - Highlights: > Fisetin-BSA system was studied by fluorescence spectroscopy. > Binding parameters, association constant and number of sites were estimated. > Binding site of fisetin was identified by competitive experiments. > Conformational changes in HSA and fisetin were evidenced by circular dichroism. > TDDFT calculated CD spectra supported the experimental data.

  5. Gray Code for Cayley Permutations

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    J.-L. Baril

    2003-10-01

    Full Text Available A length-n Cayley permutation p of a total ordered set S is a length-n sequence of elements from S, subject to the condition that if an element x appears in p then all elements y < x also appear in p . In this paper, we give a Gray code list for the set of length-n Cayley permutations. Two successive permutations in this list differ at most in two positions.

  6. Parimutuel Betting on Permutations

    CERN Document Server

    Agrawal, Shipra; Ye, Yinyu

    2008-01-01

    We focus on a permutation betting market under parimutuel call auction model where traders bet on the final ranking of n candidates. We present a Proportional Betting mechanism for this market. Our mechanism allows the traders to bet on any subset of the n x n 'candidate-rank' pairs, and rewards them proportionally to the number of pairs that appear in the final outcome. We show that market organizer's decision problem for this mechanism can be formulated as a convex program of polynomial size. More importantly, the formulation yields a set of n x n unique marginal prices that are sufficient to price the bets in this mechanism, and are computable in polynomial-time. The marginal prices reflect the traders' beliefs about the marginal distributions over outcomes. We also propose techniques to compute the joint distribution over n! permutations from these marginal distributions. We show that using a maximum entropy criterion, we can obtain a concise parametric form (with only n x n parameters) for the joint dist...

  7. Visual recognition of permuted words

    Science.gov (United States)

    Rashid, Sheikh Faisal; Shafait, Faisal; Breuel, Thomas M.

    2010-02-01

    In current study we examine how letter permutation affects in visual recognition of words for two orthographically dissimilar languages, Urdu and German. We present the hypothesis that recognition or reading of permuted and non-permuted words are two distinct mental level processes, and that people use different strategies in handling permuted words as compared to normal words. A comparison between reading behavior of people in these languages is also presented. We present our study in context of dual route theories of reading and it is observed that the dual-route theory is consistent with explanation of our hypothesis of distinction in underlying cognitive behavior for reading permuted and non-permuted words. We conducted three experiments in lexical decision tasks to analyze how reading is degraded or affected by letter permutation. We performed analysis of variance (ANOVA), distribution free rank test, and t-test to determine the significance differences in response time latencies for two classes of data. Results showed that the recognition accuracy for permuted words is decreased 31% in case of Urdu and 11% in case of German language. We also found a considerable difference in reading behavior for cursive and alphabetic languages and it is observed that reading of Urdu is comparatively slower than reading of German due to characteristics of cursive script.

  8. Tetrachoric Correlation: A Permutation Alternative

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    Long, Michael A.; Berry, Kenneth J.; Mielke, Paul W., Jr.

    2009-01-01

    An exact permutation test is provided for the tetrachoric correlation coefficient. Comparisons with the conventional test employing Student's t distribution demonstrate the necessity of using the permutation approach for small sample sizes and/or disproportionate marginal frequency totals. (Contains 4 tables.)

  9. Permutationally invariant state reconstruction

    DEFF Research Database (Denmark)

    Moroder, Tobias; Hyllus, Philipp; Tóth, Géza;

    2012-01-01

    Feasible tomography schemes for large particle numbers must possess, besides an appropriate data acquisition protocol, an efficient way to reconstruct the density operator from the observed finite data set. Since state reconstruction typically requires the solution of a nonlinear large-scale opti......Feasible tomography schemes for large particle numbers must possess, besides an appropriate data acquisition protocol, an efficient way to reconstruct the density operator from the observed finite data set. Since state reconstruction typically requires the solution of a nonlinear large...... likelihood and least squares methods, which are the preferred choices in today's experiments. This high efficiency is achieved by greatly reducing the dimensionality of the problem employing a particular representation of permutationally invariant states known from spin coupling combined with convex...

  10. Maps, immersions and permutations

    CERN Document Server

    Coquereaux, Robert

    2015-01-01

    We consider the problem of counting and of listing topologically inequivalent "planar" {4-valent} maps with a single component and a given number n of vertices. This enables us to count and to tabulate immersions of a circle in a sphere (spherical curves), extending results by Arnold and followers. Different options where the circle and/or the sphere are/is oriented are considered in turn, following Arnold's classification of the different types of symmetries. We also consider the case of bicolourable and bicoloured maps or immersions, where faces are bicoloured. Our method extends to immersions of a circle in a higher genus Riemann surface. There the bicolourability is no longer automatic and has to be assumed. We thus have two separate countings in non zero genus, that of bicolourable maps and that of general maps. We use a classical method of encoding maps in terms of permutations, on which the constraints of "one-componentness" and of a given genus may be applied. Depending on the orientation issue and on...

  11. Hardware Index to Permutation Converter

    Science.gov (United States)

    2012-05-01

    latency to be n−1. Note that, after the first codeword emerges, a codeword emerges at each clock period. C. Results A Verilog program was written to...by the Verilog code executes significantly faster on the SRC-6 than the C code on the microprocessor. For example, for 10-element permutations, the... Verilog code, each permutation was represented by a single word. Here, each word has nlog2(n) bits, which is 36 for n = 9, for example. Although a

  12. A combined binding mechanism of nonionic ethoxylated surfactants to bovine serum albumin revealed by fluorescence and circular dichroism.

    Science.gov (United States)

    Iovescu, Alina; Băran, Adriana; Stîngă, Gabriela; Cantemir-Leontieş, Anca Ruxandra; Maxim, Monica Elisabeta; Anghel, Dan Florin

    2015-12-01

    The study systematically investigates aqueous mixtures of fixed bovine serum albumin (BSA) and various ethoxylated nonionic surfactants belonging to a homologous series or not. Mono-disperse tetra-(C12E4), hexa-(C12E6) and octa-ethyleneglycol mono-n-dodecyl ether (C12E8), and poly-disperse eicosa-ethyleneglycol mono-n-tetradecyl ether (C14EO20) are respectively employed. Fluorescence and circular dichroism measurements are performed at surfactant/protein molar ratios (rm)s lower and higher than one. We aim to get new insights into the binding mechanism of these species and to differentiate among the interaction abilities of these surfactants. The relative magnitude of the binding thermodynamic parameters by fluorescence, and the increase of α-helix prove that hydrogen bonding drives the interaction next to the hydrophobic attraction. C12En (n=4,6,8) develop more H bonds with the albumin than C14EO20 owing to a zigzag conformation of their short ethyleneoxide chains. Among the homologous surfactants, C12E6 has a slightly stronger interaction with BSA due to a maximal number of H bonds at a minimal hindering. Static fluorescence and dynamic fluorescence indicate an inter-conversion between the tryptophan (Trp) rotamers which happens around the surfactants critical micellar concentration. For C14EO20, the meander conformation of the polar group determines a less evident conversion of the Trp rotamers and smaller α-helix rise. Binding isotherms of the homologous surfactants and the fluorescence quenching mechanism by C12E6 are also provided.

  13. Spectral characteristics of fluorescence and circular dichroism of aflatoxin B1 reaction with its anti-idiotypic antibody

    Science.gov (United States)

    Liu, Aiping; Yang, Hongxiu; Wang, Xiaohong; Chen, Fusheng

    2012-11-01

    Aflatoxin B1 (AFB1) is a toxic secondary metabolite and sensitive methods for its analysis have been developed. In our lab, a number of works have been carried out, including exploitation of detection methods and production of anti-idiotypic antibody (Ab2) against Fab fragment of anti-AFB1 antibody (Ab1). In this paper, Ab2 was generated upon the immunization of mice with F(ab')2 fragment, which was specific to AFB1 and obtained by pepsin digestion of Ab1. The characteristics of Ab2 was primarily investigated by indirect competitive enzyme-linked immunosorbent assay (icELISA), which indicated that Ab2, might bear an internal image of antigen AFB1 and was able to combine to F(ab')2 in competition with AFB1, and the concentration of Ab2 to cause 50% inhibition of binding (IC50) was 131.8 μg/mL. In addition, fluorescence and circular dichroism studies were designed to explore the mutual relationship among AFB1, F(ab')2 and Ab2. The fluorescence spectroscopy implied that both AFB1 and Ab2 act as a quencher upon F(ab')2, and the Ab2 could compete with AFB1 when both of Ab2 and AFB1 reacted with F(ab')2. The circular dichroism (CD) spectrum suggested that both the binding of Ab2 and AFB1 on F(ab')2 brought secondary conformation change of F(ab')2, especially in the changes of α helix and β sheet. The research performed would provide unique insight into the comprehension of interaction among AFB1, F(ab')2 and Ab2 as well as offer structural information for substitution researches of toxic antigen like AFB1.

  14. Permutation Complexity in Dynamical Systems

    CERN Document Server

    Amigo, Jose

    2010-01-01

    The study of permutation complexity can be envisioned as a new kind of symbolic dynamics whose basic blocks are ordinal patterns, that is, permutations defined by the order relations among points in the orbits of dynamical systems. Since its inception in 2002 the concept of permutation entropy has sparked a new branch of research in particular regarding the time series analysis of dynamical systems that capitalizes on the order structure of the state space. Indeed, on one hand ordinal patterns and periodic points are closely related, yet ordinal patterns are amenable to numerical methods, while periodicity is not. Another interesting feature is that since it can be shown that random (unconstrained) dynamics has no forbidden patterns with probability one, their existence can be used as a fingerprint to identify any deterministic origin of orbit generation. This book is primarily addressed to researchers working in the field of nonlinear dynamics and complex systems, yet will also be suitable for graduate stude...

  15. Optical and structural properties of plasma-treated Cordyceps bassiana spores as studied by circular dichroism, absorption, and fluorescence spectroscopy

    Science.gov (United States)

    Lee, Geon Joon; Sim, Geon Bo; Choi, Eun Ha; Kwon, Young-Wan; Kim, Jun Young; Jang, Siun; Kim, Seong Hwan

    2015-01-01

    To understand the killing mechanism of fungal spores by plasma treatment, the optical, structural, and biological properties of the insect pathogenic fungus Cordyceps bassiana spores were studied. A nonthermal atmospheric-pressure plasma jet (APPJ) was used to treat the spores in aqueous solution. Optical emission spectra of the APPJ acquired in air indicated emission peaks corresponding to hydroxyl radicals and atomic oxygen. When the APPJ entered the aqueous solution, additional reactive species were derived from the interaction of plasma radicals with the aqueous solution. Fluorescence and absorption spectroscopy confirmed the generation of hydroxyl radicals and hydrogen peroxide in the plasma-activated water (PAW). Spore counting showed that plasma treatment significantly reduced spore viability. Absorption spectroscopy, circular dichroism (CD) spectroscopy, and agarose gel electrophoresis of the DNA extracted from plasma-treated spores showed a reduction in spore DNA content. The magnitude of the dip in the CD spectrum was lower in the plasma-treated spores than in the control, indicating that plasma treatment causes structural modifications and/or damage to cellular components. Tryptophan fluorescence intensity was lower in the plasma-treated spores than in the control, suggesting that plasma treatment modified cell wall proteins. Changes in spore viability and DNA content were attributed to structural modification of the cell wall by reactive species coming from the APPJ and the PAW. Our results provided evidence that the plasma radicals and the derived reactive species play critical roles in fungal spore inactivation.

  16. Optical and structural properties of plasma-treated Cordyceps bassiana spores as studied by circular dichroism, absorption, and fluorescence spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Geon Joon, E-mail: gjlee@kw.ac.kr; Sim, Geon Bo; Choi, Eun Ha [Plasma Bioscience Research Center/Department of Electrical and Biological Physics, Kwangwoon University, Seoul 139-701 (Korea, Republic of); Kwon, Young-Wan [KU-KIST Graduate School of Converging Science and Technology, Korea University, Seoul 136-701 (Korea, Republic of); Kim, Jun Young; Jang, Siun; Kim, Seong Hwan, E-mail: piceae@naver.com [Department of Microbiology and Institute of Basic Sciences, Dankook University, Cheonan 330-714 (Korea, Republic of)

    2015-01-14

    To understand the killing mechanism of fungal spores by plasma treatment, the optical, structural, and biological properties of the insect pathogenic fungus Cordyceps bassiana spores were studied. A nonthermal atmospheric-pressure plasma jet (APPJ) was used to treat the spores in aqueous solution. Optical emission spectra of the APPJ acquired in air indicated emission peaks corresponding to hydroxyl radicals and atomic oxygen. When the APPJ entered the aqueous solution, additional reactive species were derived from the interaction of plasma radicals with the aqueous solution. Fluorescence and absorption spectroscopy confirmed the generation of hydroxyl radicals and hydrogen peroxide in the plasma-activated water (PAW). Spore counting showed that plasma treatment significantly reduced spore viability. Absorption spectroscopy, circular dichroism (CD) spectroscopy, and agarose gel electrophoresis of the DNA extracted from plasma-treated spores showed a reduction in spore DNA content. The magnitude of the dip in the CD spectrum was lower in the plasma-treated spores than in the control, indicating that plasma treatment causes structural modifications and/or damage to cellular components. Tryptophan fluorescence intensity was lower in the plasma-treated spores than in the control, suggesting that plasma treatment modified cell wall proteins. Changes in spore viability and DNA content were attributed to structural modification of the cell wall by reactive species coming from the APPJ and the PAW. Our results provided evidence that the plasma radicals and the derived reactive species play critical roles in fungal spore inactivation.

  17. Novel permutation measures for image encryption algorithms

    Science.gov (United States)

    Abd-El-Hafiz, Salwa K.; AbdElHaleem, Sherif H.; Radwan, Ahmed G.

    2016-10-01

    This paper proposes two measures for the evaluation of permutation techniques used in image encryption. First, a general mathematical framework for describing the permutation phase used in image encryption is presented. Using this framework, six different permutation techniques, based on chaotic and non-chaotic generators, are described. The two new measures are, then, introduced to evaluate the effectiveness of permutation techniques. These measures are (1) Percentage of Adjacent Pixels Count (PAPC) and (2) Distance Between Adjacent Pixels (DBAP). The proposed measures are used to evaluate and compare the six permutation techniques in different scenarios. The permutation techniques are applied on several standard images and the resulting scrambled images are analyzed. Moreover, the new measures are used to compare the permutation algorithms on different matrix sizes irrespective of the actual parameters used in each algorithm. The analysis results show that the proposed measures are good indicators of the effectiveness of the permutation technique.

  18. Permutation orbifolds and their applications

    CERN Document Server

    Bántay, P

    2001-01-01

    The theory of permutation orbifolds is reviewed and applied to the study of symmetric product orbifolds and the congruence subgroup problem. The issue of discrete torsion, the combinatorics of symmetric products, the Galois action and questions related to the classification of RCFTs are also discussed.

  19. A Note on Permutationally Convex Games

    NARCIS (Netherlands)

    van Velzen, S.; Hamers, H.J.M.; Norde, H.W.

    2005-01-01

    In this paper we generalise marginal vectors and permutational convexity.We show that if a game is generalised permutationally convex, then the corresponding generalised marginal vector is a core element.Furthermore we refine the concept of permutational convexity and show that this refinement yield

  20. Decryption of pure-position permutation algorithms

    Institute of Scientific and Technical Information of China (English)

    赵晓宇; 陈刚; 张亶; 王肖虹; 董光昌

    2004-01-01

    Pure position permutation image encryption algorithms, commonly used as image encryption investigated in this work are unfortunately frail under known-text attack. In view of the weakness of pure position permutation algorithm,we put forward an effective decryption algorithm for all pure-position permutation algorithms. First, a summary of the pure position permutation image encryption algorithms is given by introducing the concept of ergodic matrices. Then, by using probability theory and algebraic principles, the decryption probability of pure-position permutation algorithms is verified theoretically; and then, by defining the operation system of fuzzy ergodic matrices, we improve a specific decryption al-gorithm. Finally, some simulation results are shown.

  1. Embedding Properties Related to System Permutability

    Institute of Scientific and Technical Information of China (English)

    Tom Kimber

    2002-01-01

    A subgroup U of a finite solvable group G is system permutable in G if there is a Hall system ∑ of G such that US ≤ G for all S ∈∑. We introduce and investigate three properties, each apparently weaker than system permutability.We show that all three properties are equivalent to system permutability in a group of p-length at most 1 for each prime p, and they determine the same subgroup closed class as system permutability. We give an example to show that two of these properties are weaker than system permutability. For the third property,this is unresolved.

  2. Competitive binding of (-)-epigallocatechin-3-gallate and 5-fluorouracil to human serum albumin: A fluorescence and circular dichroism study

    Science.gov (United States)

    Yuan, Lixia; Liu, Min; Liu, Guiqin; Li, Dacheng; Wang, Zhengping; Wang, Bingquan; Han, Jun; Zhang, Min

    2017-02-01

    Combination therapy with more than one therapeutic agent can improve therapeutic efficiency and decrease drug resistance. In this study, the interactions of human serum albumin (HSA) with individual or combined anticancer drugs, (-)-epigallocatechin-3-gallate (EGCG) and 5-fluorouracil (FU), were investigated by fluorescence and circular dichroism (CD) spectroscopy. The results demonstrated that the interaction of EGCG or FU with HSA is a process of static quenching and EGCG formed a more stable complex. The competitive experiments of site markers suggested that both anti-carcinogens mainly bound to site I (subdomain IIA). The interaction forces which play important roles in the binding process were discussed based on enthalpy and entropy changes. Moreover, the competition binding model for a ternary system was proposed so as to precisely calculate the binding parameters. The results demonstrated that one drug decreased the binding affinity of another drug with HSA, resulting in the increasing free drug concentration at the action sites. CD studies indicated that there was an alteration in HSA secondary structure due to the binding of EGCG and FU. It can be concluded that the combination of EGCG with FU may enhance anticancer efficacy. This finding may provide a theoretical basis for clinical treatments.

  3. Cascade Product of Permutation Groups

    OpenAIRE

    Egri-Nagy, Attila; Nehaniv, Chrystopher L.

    2013-01-01

    We define the cascade product of permutation groups as an external product, an explicit construction of substructures of the iterated wreath product that are much smaller than the full wreath product. This construction is essential for computational implementations of algebraic hierarchical decompositions of finite automata. We show how direct, semidirect, and wreath products and group extensions can all be expressed as cascade products, and analyse examples of groups that can be constructed ...

  4. Fast Digit-Index Permutations

    Directory of Open Access Journals (Sweden)

    Dorothy Bollman

    1996-01-01

    Full Text Available We introduce a tensor sum which is useful for the design and analysis of digit-index permutations (DIPs algorithms. Using this operation we obtain a new high-performance algorithm for the family of DIPs. We discuss an implementation in the applicative language Sisal and show how different choices of parameters yield different DIPs. The efficiency of the special case of digit reversal is illustrated with performance results on a Cray C-90.

  5. Witt Rings and Permutation Polynomials

    Institute of Scientific and Technical Information of China (English)

    Qifan Zhang

    2005-01-01

    Let p be a prime number. In this paper, the author sets up a canonical correspondence between polynomial functions over Z/p2Z and 3-tuples of polynomial functions over Z/pZ. Based on this correspondence, he proves and reproves some fundamental results on permutation polynomials mod pl. The main new result is the characterization of strong orthogonal systems over Z/p1Z.

  6. Fast and sensitive medical diagnostic protocol based on integrating circular current lines for magnetic washing and optical detection of fluorescent magnetic nanobeads

    Directory of Open Access Journals (Sweden)

    Jaiyam Sharma

    2016-07-01

    Full Text Available Magnetic nanoparticles (MNPs are increasingly being used as ‘magnetic labels’ in medical diagnostics. Practical applications of MNPs necessitate reducing their non-specific interactions with sensor surfaces that result in noise in measurements. Here we describe the design and implementation of a sensing platform that incorporates circular shaped current lines that reduce non-specific binding by enabling the “magnetic washing” of loosely attached MNPs attached to the senor surface. Generating magnetic fields by passing electrical currents through the circular shaped current lines enabled the capture and collection of fluorescent MNPs that was more efficient and effective than straight current lines reported to-date. The use of fluorescent MNPs allows their optical detection rather than with widely used magnetoresistive sensors. As a result our approach is not affected by magnetic noise due to the flow of currents. Our design is expected to improve the speed, accuracy, and sensitivity of MNPs based medical diagnostics.

  7. Minimal factorizations of permutations into star transpositions

    OpenAIRE

    Irving, J.; Rattan, Amarpreet

    2009-01-01

    International audience; We give a compact expression for the number of factorizations of any permutation into a minimal number of transpositions of the form $(1 i)$. Our result generalizes earlier work of Pak ($\\textit{Reduced decompositions of permutations in terms of star transpositions, generalized catalan numbers and k-ary trees}$, Discrete Math. $\\textbf{204}$:329―335, 1999) in which substantial restrictions were placed on the permutation being factored.; Nous présentons une expression c...

  8. Congruence Permutable Symmetric Extended de Morgan Algebras

    Institute of Scientific and Technical Information of China (English)

    Jie FANG

    2006-01-01

    An algebra A is said to be congruence permutable if any two congruences on it are per-mutable. This property has been investigated in several varieties of algebras, for example, de Morgan algebras, p-algebras, Kn,o-algebras. In this paper, we study the class of symmetric extended de Morgan algebras that are congruence permutable. In particular we consider the case where A is finite, and show that A is congruence permutable if and only if it is isomorphic to a direct product of finitely many simple algebras.

  9. Photon diffusion in a homogeneous medium bounded externally or internally by an infinitely long circular cylindrical applicator. V. Steady-state fluorescence.

    Science.gov (United States)

    Piao, Daqing; Zhang, Anqi; Xu, Guan

    2013-04-01

    As Part V in our series, this paper examines steady-state fluorescence photon diffusion in a homogenous medium that contains a homogenous distribution of fluorophores, and is enclosed by a "concave" circular cylindrical applicator or is enclosing a "convex" circular cylindrical applicator, both geometries being infinite in the longitudinal dimension. The aim is to predict by analytics and examine with the finite-element method the changing characteristics of the fluorescence-wavelength photon-fluence rate and the ratio (sometimes called the Born ratio) of it versus the excitation-wavelength photon-fluence rate, with respect to the source-detector distance. The analysis is performed for a source and a detector located on the medium-applicator interface and aligned either azimuthally or longitudinally in both concave and convex geometries. When compared to its steady-state counterparts on a semi-infinite medium-applicator interface with the same line-of-sight source-detector distance, the fluorescence-wavelength photon-fluence rate reduces faster along the longitudinal direction and slower along the azimuthal direction in the concave geometry, and conversely in the convex geometry. However, the Born ratio increases slower in both azimuthal and longitudinal directions in the concave geometry and faster in both directions in the convex geometry, respectively, when compared to that in the semi-infinite geometry.

  10. Symmetric products, permutation orbifolds and discrete torsion

    CERN Document Server

    Bántay, P

    2000-01-01

    Symmetric product orbifolds, i.e. permutation orbifolds of the full symmetric group S_{n} are considered by applying the general techniques of permutation orbifolds. Generating functions for various quantities, e.g. the torus partition functions and the Klein-bottle amplitudes are presented, as well as a simple expression for the discrete torsion coefficients.

  11. Simple permutations with order $4n + 2$

    CERN Document Server

    Acosta-Humánez, Primitivo B

    2010-01-01

    The problem of genealogy of permutations has been solved partially by Stefan (odd order) and Acosta-Hum\\'anez & Bernhardt (power of two). It is well known that Sharkovskii's theorem shows the relationship between the cardinal of the set of periodic points of a continuous map, but simple permutations will show the behavior of those periodic points. This paper studies the structure of permutations of mixed order $4n+2$, its properties and a way to describe its genealogy by using Pasting and Reversing.

  12. Permutation orbifolds of heterotic Gepner models

    CERN Document Server

    Maio, M

    2011-01-01

    We study orbifolds by permutations of two identical N=2 minimal models within the Gepner construction of four dimensional heterotic strings. This is done using the new N=2 supersymmetric permutation orbifold building blocks we have recently developed. We compare our results with the old method of modding out the full string partition function. The overlap between these two approaches is surprisingly small, but whenever a comparison can be made we find complete agreement. The use of permutation building blocks allows us to use the complete arsenal of simple current techniques that is available for standard Gepner models, vastly extending what could previously be done for permutation orbifolds. In particular, we consider (0,2) models, breaking of SO(10) to subgroups, weight-lifting for the minimal models and B-L lifting. Some previously observed phenomena, for example concerning family number quantization, extend to this new class as well, and in the lifted models three family models occur with abundance compar...

  13. EPC: A Provably Secure Permutation Based Compression Function

    DEFF Research Database (Denmark)

    Bagheri, Nasour; Gauravaram, Praveen; Naderi, Majid;

    2010-01-01

    The security of permutation-based hash functions in the ideal permutation model has been studied when the input-length of compression function is larger than the input-length of the permutation function. In this paper, we consider permutation based compression functions that have input lengths sh...

  14. Wilf classification of doubly generalized permutation patterns

    CERN Document Server

    Parviainen, Robert

    2009-01-01

    We classify all doubly generalized patterns of length two and three according to the number of permutations avoiding them. These patterns were recently defined by Bousquet-Melou et. al., and are natural generalizations of Babson and Steingrimsson's generalized patterns. The patterns are divided into seven and 24 Wilf classes, for lengths two and three, respectively. For most of the patterns an explicit form for the number of permutations avoiding the pattern is given.

  15. Permutation parity machines for neural cryptography.

    Science.gov (United States)

    Reyes, Oscar Mauricio; Zimmermann, Karl-Heinz

    2010-06-01

    Recently, synchronization was proved for permutation parity machines, multilayer feed-forward neural networks proposed as a binary variant of the tree parity machines. This ability was already used in the case of tree parity machines to introduce a key-exchange protocol. In this paper, a protocol based on permutation parity machines is proposed and its performance against common attacks (simple, geometric, majority and genetic) is studied.

  16. Permutations with Ascending and Descending Blocks

    CERN Document Server

    Steinhardt, Jacob

    2009-01-01

    We investigate permutations in terms of their cycle structure and descent set. To do this, we generalize the classical bijection of Gessel and Reutenauer to deal with permutations that have some ascending and some descending blocks. We then provide the first bijective proofs of some known results. We also solve some problems posed in [3] by Eriksen, Freij, and Wastlund, who study derangements that descend in blocks of prescribed lengths.

  17. Mesh patterns and the expansion of permutation statistics as sums of permutation patterns

    CERN Document Server

    Brändén, Petter

    2011-01-01

    Any permutation statistic $f:\\sym\\to\\CC$ may be represented uniquely as a, possibly infinite, linear combination of (classical) permutation patterns: $f= \\Sigma_\\tau\\lambda_f(\\tau)\\tau$. To provide explicit expansions for certain statistics, we introduce a new type of permutation patterns that we call mesh patterns. Intuitively, a mesh pattern $p=(\\pi,R)$ counts occurrences of the permutation pattern $\\pi$ with additional restrictions specified by $R$ on the relative position of the entries of the occurrence. We show that, for any mesh pattern $p=(\\pi,R)$, we have $\\lambda_p(\\tau) = (-1)^{|\\tau|-|\\pi|}p^{\\star}(\\tau)$ where $p^{\\star}=(\\pi,R^c)$ is the mesh pattern with the same underlying permutation as $p$ but with complementary restrictions. We use this result to expand some well known permutation statistics, such as the number of left-to-right maxima, descents, excedances, fixed points, strong fixed points, and the major index. We also show that alternating permutations, Andr\\'e permutations of the first ...

  18. On Exact Algorithms for Permutation CSP

    CERN Document Server

    Kim, Eun Jung

    2012-01-01

    In the Permutation Constraint Satisfaction Problem (Permutation CSP) we are given a set of variables $V$ and a set of constraints C, in which constraints are tuples of elements of V. The goal is to find a total ordering of the variables, $\\pi\\ : V \\rightarrow [1,...,|V|]$, which satisfies as many constraints as possible. A constraint $(v_1,v_2,...,v_k)$ is satisfied by an ordering $\\pi$ when $\\pi(v_1)<\\pi(v_2)<...<\\pi(v_k)$. An instance has arity $k$ if all the constraints involve at most $k$ elements. This problem expresses a variety of permutation problems including {\\sc Feedback Arc Set} and {\\sc Betweenness} problems. A naive algorithm, listing all the $n!$ permutations, requires $2^{O(n\\log{n})}$ time. Interestingly, {\\sc Permutation CSP} for arity 2 or 3 can be solved by Held-Karp type algorithms in time $O^*(2^n)$, but no algorithm is known for arity at least 4 with running time significantly better than $2^{O(n\\log{n})}$. In this paper we resolve the gap by showing that {\\sc Arity 4 Permutati...

  19. Administrative Circulars

    CERN Multimedia

    Département des Ressources humaines

    2004-01-01

    Administrative Circular N° 2 (Rev. 2) - May 2004 Guidelines and procedures concerning recruitment and probation period of staff members This circular has been revised. It cancels and replaces Administrative Circular N° 2 (Rev. 1) - March 2000. Administrative Circular N° 9 (Rev. 3) - May 2004 Staff members contracts This circular has been revised. It cancels and replaces Administrative Circular N° 9 (Rev. 2) - March 2000. Administrative Circular N° 26 (Rev. 4) - May 2004 Procedure governing the career evolution of staff members This circular has also been revised. It Administrative Circulars Administrative Circular N° 26 (Rev. 3) - December 2001 and brings up to date the French version (Rev. 4) published on the HR Department Web site in January 2004. Operational Circular N° 7 - May 2004 Work from home This circular has been drawn up. Operational Circular N° 8 - May 2004 Dealing with alcohol-related problems...

  20. Basic amphipathic model peptides: Structural investigations in solution, studied by circular dichroism, fluorescence, analytical ultracentrifugation and molecular modelling

    Science.gov (United States)

    Mangavel, C.; Sy, D.; Reynaud, J. A.

    1999-05-01

    A twenty amino acid residue long amphipathic peptide made of ten leucine and ten lysine residues and four derivatives, in which a tryptophan, as a fluorescent probe, is substituted for a leucine, are studied. The peptides in water are mainly in an unordered conformation (~90%), and undergo a two state reversible transition upon heating, leading to a partially helical conformation (cold denaturation). Time resolved fluorescence results show that fluorescence decay for the four Trp containing peptides is best described by triple fluorescence decay kinetics. In TFE/water mixture, peptides adopt a single α-helix conformation but the Leu-Trp9 substitution leads to an effective helix destabilizing effect. In salted media, the peptides are fully helical and present a great tendency to self associate by bringing the hydrophobic faces of helices into close contact. This proceeds in non-cooperative multisteps leading to the formation of α helix aggregates with various degrees of complexation. Using modelling, the relative hydrophobic surface areas accessible to water molecules in n-mer structures are calculated and discussed. Nous avons étudié un peptide amphipathique composé de dix lysine et dix leucine, ainsi que quatre dérivés comportant un résidu tryptophane pour les études par fluorescence. Dans l'eau, les peptides ne sont pas structurés (~90%), et se structurent partiellement en hélice α par chauffage (dénaturation froide). Les mesures de déclin de fluorescence font apparaître une cinétique à trois temps de vie. Dans un mélange eau/TFE, les peptides adoptent une conformation en hélice α, mais la substitution Leu-Trp9 possède un effet déstabilisant. En mileu salin, les peptides sont totalement hélicoïdaux et ont tendance à s'agréger de façon à regrouper leur face hydrophobe. Ce processus se fait en plusieurs étapes avec des agrégats de taille variable. L'existence de tels agrégats est discutée sur la base de la modélisation mol

  1. Permutation statistical methods an integrated approach

    CERN Document Server

    Berry, Kenneth J; Johnston, Janis E

    2016-01-01

    This research monograph provides a synthesis of a number of statistical tests and measures, which, at first consideration, appear disjoint and unrelated. Numerous comparisons of permutation and classical statistical methods are presented, and the two methods are compared via probability values and, where appropriate, measures of effect size. Permutation statistical methods, compared to classical statistical methods, do not rely on theoretical distributions, avoid the usual assumptions of normality and homogeneity of variance, and depend only on the data at hand. This text takes a unique approach to explaining statistics by integrating a large variety of statistical methods, and establishing the rigor of a topic that to many may seem to be a nascent field in statistics. This topic is new in that it took modern computing power to make permutation methods available to people working in the mainstream of research. This research monograph addresses a statistically-informed audience, and can also easily serve as a ...

  2. Probing the Interaction of Human Serum Albumin with Norfloxacin in the Presence of High-Frequency Electromagnetic Fields: Fluorescence Spectroscopy and Circular Dichroism Investigations

    Directory of Open Access Journals (Sweden)

    Jamshidkhan Chamani

    2011-11-01

    Full Text Available The present study describes an investigation by fluorescence quenching, circular dichroism and UV-visible spectroscopy of the interaction between norfloxacin (NRF and human serum albumin (HSA in the presence of electromagnetic fields (EMFs. The results obtained from this study indicated that NRF had a strong ability to quench HSA at λex = 280 nm. In addition, a slight blue shift occurred, which suggested that the microenvironment of the protein became more hydrophobic after addition of NRF. The interaction between the NRF and HSA, whether in the absence or presence of an EMF, was considered to be a static quenching mechanism. Moreover, synchronous fluorescence demonstrated that the microenvironment around Trp became modified. Data of HSA-NRF in the presence of EMFs between 1 Hz–1 MHz confirmed the results of quenching and blue shifts. Corresponding Stern-Volmer plots were also drawn and the resultant Ksv and kq values were compared. Moreover, the binding parameters, including the number of binding sites, the binding constant and the distance, r, between donor and acceptor, were calculated based on Förster’s non-radiative energy transfer theory. According to far and near UV-CD, the formation of the complex caused changes of the secondary and tertiary structures of HSA. The obtained results are significant for patients who are subjected to high-frequency radiation as this was found to reduce the affinity of NRF to HSA.

  3. A Representation of Permutations with Full Cycle

    CERN Document Server

    Cesmelioglu, Ayca

    2010-01-01

    For q > 2, Carlitz proved that the group of permutation polynomials (PPs) over F_q is generated by linear polynomials and x^{q-2}. Based on this result, this note points out a simple method for representing all PPs with full cycle over the prime field F_p, where p is an odd prime. We use the isomorphism between the symmetric group S_p of p elements and the group of PPs over F_p, and the well-known fact that permutations in S_p have the same cycle structure if and only if they are conjugate.

  4. Space Time Codes from Permutation Codes

    CERN Document Server

    Henkel, Oliver

    2006-01-01

    A new class of space time codes with high performance is presented. The code design utilizes tailor-made permutation codes, which are known to have large minimal distances as spherical codes. A geometric connection between spherical and space time codes has been used to translate them into the final space time codes. Simulations demonstrate that the performance increases with the block lengths, a result that has been conjectured already in previous work. Further, the connection to permutation codes allows for moderate complex en-/decoding algorithms.

  5. The L-sharp permutation groups

    Institute of Scientific and Technical Information of China (English)

    李炯生

    2000-01-01

    An answer is given to a problem proposed by Bannai and Ito for { l, l + s, l + s + t} -sharp permutation group, and the result is used to determine L-sharp groups for L = { l, l + 1, l + 3} and{l,l+2,l+3}.

  6. Flavour singlets in gauge theory as Permutations

    CERN Document Server

    Kimura, Yusuke; Suzuki, Ryo

    2016-01-01

    Gauge-invariant operators can be specified by equivalence classes of permutations. We develop this idea concretely for the singlets of the flavour group $SO(N_f)$ in $U(N_c)$ gauge theory by using Gelfand pairs and Schur-Weyl duality. The singlet operators, when specialised at $N_f =6$, belong to the scalar sector of ${\\cal N}=4$ SYM. A simple formula is given for the two-point functions in the free field limit of $g_{YM}^2 =0$. The free two-point functions are shown to be equal to the partition function on a 2-complex with boundaries and a defect, in a topological field theory of permutations. The permutation equivalence classes are Fourier transformed to a representation basis which is orthogonal for the two-point functions at finite $N_c , N_f$. Counting formulae for the gauge-invariant operators are described. The one-loop mixing matrix is derived as a linear operator on the permutation equivalence classes.

  7. Permutation orbifolds of heterotic Gepner models

    Energy Technology Data Exchange (ETDEWEB)

    Maio, M., E-mail: michelem@nikhef.n [Nikhef Theory Group, Amsterdam (Netherlands); Schellekens, A.N. [Nikhef Theory Group, Amsterdam (Netherlands); IMAPP, Radboud Universiteit Nijmegen (Netherlands); Instituto de Fisica Fundamental, CSIC, Madrid (Spain)

    2011-07-21

    We study orbifolds by permutations of two identical N=2 minimal models within the Gepner construction of four-dimensional heterotic strings. This is done using the new N=2 supersymmetric permutation orbifold building blocks we have recently developed. We compare our results with the old method of modding out the full string partition function. The overlap between these two approaches is surprisingly small, but whenever a comparison can be made we find complete agreement. The use of permutation building blocks allows us to use the complete arsenal of simple current techniques that is available for standard Gepner models, vastly extending what could previously be done for permutation orbifolds. In particular, we consider (0,2) models, breaking of SO(10) to subgroups, weight-lifting for the minimal models and B-L lifting. Some previously observed phenomena, for example concerning family number quantization, extend to this new class as well, and in the lifted models three-family models occur with abundance comparable to two or four.

  8. Demonstration of quantum permutation algorithm with a single photon ququart.

    Science.gov (United States)

    Wang, Feiran; Wang, Yunlong; Liu, Ruifeng; Chen, Dongxu; Zhang, Pei; Gao, Hong; Li, Fuli

    2015-06-05

    We report an experiment to demonstrate a quantum permutation determining algorithm with linear optical system. By employing photon's polarization and spatial mode, we realize the quantum ququart states and all the essential permutation transformations. The quantum permutation determining algorithm displays the speedup of quantum algorithm by determining the parity of the permutation in only one step of evaluation compared with two for classical algorithm. This experiment is accomplished in single photon level and the method exhibits universality in high-dimensional quantum computation.

  9. Defects and permutation branes in the Liouville field theory

    DEFF Research Database (Denmark)

    Sarkissian, Gor

    2009-01-01

    The defects and permutation branes for the Liouville field theory are considered. By exploiting cluster condition, equations satisfied by permutation branes and defects reflection amplitudes are obtained. It is shown that two types of solutions exist, discrete and continuous families.......The defects and permutation branes for the Liouville field theory are considered. By exploiting cluster condition, equations satisfied by permutation branes and defects reflection amplitudes are obtained. It is shown that two types of solutions exist, discrete and continuous families....

  10. Quick Trickle Permutation Based on Quick Trickle Characteristic Sequence

    Institute of Scientific and Technical Information of China (English)

    Wang Li-na; Fei Ru-chun; Liu Zhu

    2003-01-01

    The concept of quick trickle characteristic sequence is presented, the properties and count of quick trickle characteristic sequence are researched, the mapping relationship between quick trickle characteristic sequence and quick trickle permutation is discussed. Finally, an efficient construction of quick trickle permutation based on quick trickle characteristic sequence is given, by which quick trickle permutation can be figured out after constructing quick trickle characteristic sequence. Quick trickle permutation has good cryptographic properties.

  11. Explicit classes of permutation polynomials of F33m

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Permutation polynomials have been an interesting subject of study for a long time and have applications in many areas of mathematics and engineering. However, only a small number of specific classes of permutation polynomials are known so far. In this paper, six classes of linearized permutation polynomials and six classes of nonlinearized permutation polynomials over F33m are presented. These polynomials have simple shapes, and they are related to planar functions.

  12. Explicit classes of permutation polynomials of F33m

    Institute of Scientific and Technical Information of China (English)

    DING CunSheng; XIANG Qing; YUAN Jin; YUAN PingZhi

    2009-01-01

    Permutation polynomials have been an interesting subject of study for a long time and have applications in many areas of mathematics and engineering. However, only a small number of specific classes of permutation polynomials are known so far. In this paper, six classes of linearized permutation polynomials and six classes of nonlinearized permutation polynomials over F33 are pre-sented. These polynomials have simple shapes, and they are related to planar functions.

  13. Circular Coinduction

    Science.gov (United States)

    Rosu, Grigore; Goguen, Joseph; Norvig, Peter (Technical Monitor)

    2001-01-01

    Circular coinduction is a technique for behavioral reasoning that extends cobasis coinduction to specifications with circularities. Because behavioral satisfaction is not recursively enumerable, no algorithm can work for every behavioral statement. However. algorithms using circular coinduction can prove every practical behavioral result that we know. This paper proves the correctness of circular coinduction and some consequences.

  14. Grid classes and the Fibonacci dichotomy for restricted permutations

    OpenAIRE

    Huczynska, Sophie; Vatter, Vincent

    2006-01-01

    We introduce and characterise grid classes, which are natural generalisations of other well-studied permutation classes. This characterisation allows us to give a new, short proof of the Fibonacci dichotomy: the number of permutations of length n in a permutation class is either at least as large as the nth Fibonacci number or is eventually polynomial.

  15. Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design

    Energy Technology Data Exchange (ETDEWEB)

    Akerboom, Jasper; Velez Rivera, Jonathan D.; Rodriguez Guilbe, María M.; Alfaro Malavé, Elisa C.; Hernandez, Hector H.; Tian, Lin; Hires, S. Andrew; Marvin, Jonathan S.; Looger, Loren L.; Schreiter, Eric R.; (MIT); (Puerto Rico); (HHMI)

    2009-03-16

    The genetically encoded calcium indicator GCaMP2 shows promise for neural network activity imaging, but is currently limited by low signal-to-noise ratio. We describe x-ray crystal structures as well as solution biophysical and spectroscopic characterization of GCaMP2 in the calcium-free dark state, and in two calcium-bound bright states: a monomeric form that dominates at intracellular concentrations observed during imaging experiments and an unexpected domain-swapped dimer with decreased fluorescence. This series of structures provides insight into the mechanism of Ca{sup 2+}-induced fluorescence change. Upon calcium binding, the calmodulin (CaM) domain wraps around the M13 peptide, creating a new domain interface between CaM and the circularly permuted enhanced green fluorescent protein domain. Residues from CaM alter the chemical environment of the circularly permuted enhanced green fluorescent protein chromophore and, together with flexible inter-domain linkers, block solvent access to the chromophore. Guided by the crystal structures, we engineered a series of GCaMP2 point mutants to probe the mechanism of GCaMP2 function and characterized one mutant with significantly improved signal-to-noise. The mutation is located at a domain interface and its effect on sensor function could not have been predicted in the absence of structural data.

  16. APE: Authenticated Permutation-Based Encryption for Lightweight Cryptography

    DEFF Research Database (Denmark)

    Andreeva, Elena; Bilgin, Begül; Bogdanov, Andrey

    2015-01-01

    of cryptographic schemes actually require the nonce assumption for their security. In this paper, we propose APE as the first permutation-based authenticated encryption scheme that is resistant against nonce misuse. We formally prove that APE is secure, based on the security of the underlying permutation....... To decrypt, APE processes the ciphertext blocks in reverse order, and uses inverse permutation calls. APE therefore requires a permutation that is both efficient for forward and inverse calls. We instantiate APE with the permutations of three recent lightweight hash function designs: Quark, Photon...

  17. High order generalized permutational fractional Fourier transforms

    Institute of Scientific and Technical Information of China (English)

    Ran Qi-Wen; Yuan Lin; Tan Li-Ying; Ma Jing; Wang Qi

    2004-01-01

    We generalize the definition of the fractional Fourier transform (FRFT) by extending the new definition proposed by Shih. The generalized FRFT, called the high order generalized permutational fractional Fourier transform (HGPFRFT),is a generalized permutational transform. It is shown to have arbitrary natural number M periodic eigenvalues not only with respect to the order of Hermite-Gaussian functions but also to the order of the transform. This HGPFRFT will be reduced to the original FRFT proposed by Namias and Liu's generalized FRFT and Shih's FRFT at the three limits with M = +∞,M = 4k (k is a natural number), and M = 4, respectively. Therefore the HGPFRFT introduces a comprehensive approach to Shih's FRFT and the original definition. Some important properties of HGPFRFT are discussed. Lastly the results of computer simulations and symbolic representations of the transform are provided.

  18. Constructing circuit codes by permuting initial sequences

    CERN Document Server

    Wynn, Ed

    2012-01-01

    Two new constructions are presented for coils and snakes in the hypercube. Improvements are made on the best known results for snake-in-the-box coils of dimensions 9, 10 and 11, and for some other circuit codes of dimensions between 8 and 13. In the first construction, circuit codes are generated from permuted copies of an initial transition sequence; the multiple copies constrain the search, so that long codes can be found relatively efficiently. In the second construction, two lower-dimensional paths are joined together with only one or two changes in the highest dimension; this requires a search for a permutation of the second sequence to fit around the first. It is possible to investigate sequences of vertices of the hypercube, including circuit codes, by connecting the corresponding vertices in an extended graph related to the hypercube. As an example of this, invertible circuit codes are briefly discussed.

  19. Permutation Analysis of Track and Column Braiding

    Institute of Scientific and Technical Information of China (English)

    李毓陵; 丁辛; 胡良剑

    2004-01-01

    The positions of braiding carrier in track and column braiding are represented by a diagrammatic braiding plan and a corresponding lattice-array is defined. A set is then formed so that the permutation analysis can be performed to represent the movement of carriers in a braiding process. The process of 4-step braiding is analyzed as an example to describe the application of the proposed method by expressing a braiding cycle as a product of disjoint cycles. As a result, a mapping relation between the disjoint cycles and the movement of carriers is deduced. Following the same analysis principles, a process of 8-step braiding and the corresponding initial state of the lattice-array is developed. A successful permutation analysis to the process manifests the general suitability of the proposed method.

  20. IA-Automorphisms of Permutational Wreath Products

    Institute of Scientific and Technical Information of China (English)

    John Panagopoulos

    2001-01-01

    Let W be the permutational wreath product of two groups A and B.In this paper, we study the relationship between the semicompleteness of W and the semicompleteness of A and B. In the general case, we give some necessary conditions for the semicompleteness of the group W. In the case of finite groups A and B with A abelian, we give necessary and sufficient conditions under which the group W is semicomplete.

  1. Bin Packing via Discrepancy of Permutations

    CERN Document Server

    Eisenbrand, Friedrich; Rothvoß, Thomas

    2010-01-01

    A well studied special case of bin packing is the 3-partition problem, where n items of size >1/4 have to be packed in a minimum number of bins of capacity one. The famous Karmarkar-Karp algorithm transforms a fractional solution of a suitable LP relaxation for this problem into an integral solution that requires at most O(log n) additional bins. The three-permutations-conjecture of Beck is the following. Given any 3 permutations on n symbols, one can color the symbols red and blue, such that in any interval of any of those permutations, the number of red and blue symbols differs only by a constant. Beck's conjecture is well known in the field of discrepancy theory. We establish a surprising connection between bin packing and Beck's conjecture: If the latter holds true, then the additive integrality gap of the 3-partition linear programming relaxation is bounded by a constant. This result indicates that improving approximability results for bin packing requires a better understanding of discrepancy theory.

  2. Permutation Entropy for Random Binary Sequences

    Directory of Open Access Journals (Sweden)

    Lingfeng Liu

    2015-12-01

    Full Text Available In this paper, we generalize the permutation entropy (PE measure to binary sequences, which is based on Shannon’s entropy, and theoretically analyze this measure for random binary sequences. We deduce the theoretical value of PE for random binary sequences, which can be used to measure the randomness of binary sequences. We also reveal the relationship between this PE measure with other randomness measures, such as Shannon’s entropy and Lempel–Ziv complexity. The results show that PE is consistent with these two measures. Furthermore, we use PE as one of the randomness measures to evaluate the randomness of chaotic binary sequences.

  3. Alternating permutations with restrictions and standard Young tableaux

    CERN Document Server

    Yan, Sherry H F

    2012-01-01

    In this paper, we give bijections between the set of 4123-avoiding down-up alternating permutations of length $2n$ and the set of standard Young tableaux of shape $(n,n,n)$, and between the set of 4123-avoiding down-up alternating permutations of length $2n-1$ and the set of shifted standard Young tableaux of shape $(n+1, n, n-1)$ via an intermediate structure of Yamanouchi words. Moreover, we get the enumeration of 4123-avoiding up-down alternating permutations of even and odd length by presenting bijections between 4123-avoiding up-down alternating permutations and standard Young tableaux.

  4. Ordered groups and infinite permutation groups

    CERN Document Server

    1996-01-01

    The subjects of ordered groups and of infinite permutation groups have long en­ joyed a symbiotic relationship. Although the two subjects come from very different sources, they have in certain ways come together, and each has derived considerable benefit from the other. My own personal contact with this interaction began in 1961. I had done Ph. D. work on sequence convergence in totally ordered groups under the direction of Paul Conrad. In the process, I had encountered "pseudo-convergent" sequences in an ordered group G, which are like Cauchy sequences, except that the differences be­ tween terms of large index approach not 0 but a convex subgroup G of G. If G is normal, then such sequences are conveniently described as Cauchy sequences in the quotient ordered group GIG. If G is not normal, of course GIG has no group structure, though it is still a totally ordered set. The best that can be said is that the elements of G permute GIG in an order-preserving fashion. In independent investigations around that t...

  5. Permuting operations on strings and their relation to prime numbers

    NARCIS (Netherlands)

    Asveld, Peter R.J.

    2011-01-01

    Some length-preserving operations on strings only permute the symbol positions in strings; such an operation $X$ gives rise to a family $\\{X_n\\}_{n\\geq 2}$ of similar permutations. We investigate the structure and the order of the cyclic group generated by $X_n$. We call an integer $n$ $X$-prime if

  6. Permuting operations on strings and their relation to prime numbers

    NARCIS (Netherlands)

    Asveld, Peter R.J.

    2010-01-01

    Some length-preserving operations on strings only permute the symbol positions in strings; such an operation $X$ gives rise to a family $\\{X_n\\}_{n\\geq2}$ of similar permutations. We investigate the structure and the order of the cyclic group generated by $X_n$. We call an integer $n$ $X$-{\\em prim

  7. Permutation Symmetry Determines the Discrete Wigner Function

    Science.gov (United States)

    Zhu, Huangjun

    2016-01-01

    The Wigner function provides a useful quasiprobability representation of quantum mechanics, with applications in various branches of physics. Many nice properties of the Wigner function are intimately connected with the high symmetry of the underlying operator basis composed of phase point operators: any pair of phase point operators can be transformed to any other pair by a unitary symmetry transformation. We prove that, in the discrete scenario, this permutation symmetry is equivalent to the symmetry group being a unitary 2 design. Such a highly symmetric representation can only appear in odd prime power dimensions besides dimensions 2 and 8. It suffices to single out a unique discrete Wigner function among all possible quasiprobability representations. In the course of our study, we show that this discrete Wigner function is uniquely determined by Clifford covariance, while no Wigner function is Clifford covariant in any even prime power dimension.

  8. TWO APPLICATIONS OF PERMUTATION TESTS IN BIOSTASTICS

    Science.gov (United States)

    LEÓN-NOVELO, LUIS; KEMPPAINEN, KAISA M.; ARDISSONE, ALEXANDRIA; DAVIS-RICHARDSON, AUSTIN; FAGEN, JENNIE; GANO, KELSEY; TRIPLETT, ERIC W.

    2014-01-01

    We show two examples of how we answer biological questions by converting them into statistical hypothesis testing problems. We consider gene abundance data, and apply permutation tests. Though these tests are simple, they allow us to test biologically relevant hypotheses. Here we present the analysis of data rising from two studies on Type 1 Diabetes. In the first study [3] are interested in comparing the gut bacterial biodiversity in children at risk and not at risk of developing diabetes. In the second study, [4] compare the gut bacterial biodiversity of children in six different sites in USA and Europe. The statistical analyses presented here are parts of the “statistical methods” in two papers mentioned above. Here we offer a detailed explanation of the “Statistical Methods” addressed to readers with a statistics background. PMID:25221355

  9. The Fractional Metric Dimension of Permutation Graphs

    Institute of Scientific and Technical Information of China (English)

    Eunjeong YI

    2015-01-01

    Let G = (V (G), E(G)) be a graph with vertex set V (G) and edge set E(G). For two distinct vertices x and y of a graph G, let RG{x, y}denote the set of vertices z such that the distance from x to z is not equal to the distance from y to z in G. For a function g defined on V (G) and for U ⊆V (G), let g(U )=? s∈U g(s). A real-valued function g:V (G)→[0, 1] is a resolving function of G if g(RG{x, y})≥1 for any two distinct vertices x, y∈V (G). The fractional metric dimension dimf (G) of a graph G is min{g(V (G)):g is a resolving function of G}. Let G1 and G2 be disjoint copies of a graph G, and let σ : V (G1) → V (G2) be a bijection. Then, a permutation graph Gσ = (V,E) has the vertex set V = V (G1)∪V (G2) and the edge set E = E(G1)∪E(G2)∪{uv|v = σ(u)}. First, we determine dimf (T ) for any tree T . We show that 1 0, there exists a permutation graph Gσ such that dimf (Gσ)−1dimf (Gσ) for all pairs (G,σ). Furthermore, we investigate dimf (Gσ) when G is a complete k-partite graph or a cycle.

  10. Circular Updates

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Circular Updates are periodic sequentially numbered instructions to debriefing staff and observers informing them of changes or additions to scientific and specimen...

  11. Understanding 3-manifolds in the context of permutations

    CERN Document Server

    Null, Karoline P

    2011-01-01

    We demonstrate how a 3-manifold, a Heegaard diagram, and a group presentation can each be interpreted as a pair of signed permutations in the symmetric group $S_d.$ We demonstrate the power of permutation data in programming and discuss an algorithm we have developed that takes the permutation data as input and determines whether the data represents a closed 3-manifold. We therefore have an invariant of groups, that is given any group presentation, we can determine if that presentation presents a closed 3-manifold.

  12. Operational Circulars

    CERN Multimedia

    2003-01-01

    Operational Circular N° 4 - April 2003 Conditions for use by members of the CERN personnel of vehicles belonging to or rented by CERN - This circular has been drawn up. Operational Circular N° 5 - October 2000 Use of CERN computing facilities - Further details on the personal use of CERN computing facilities Operational Circular N° 5 and its Subsidiary Rules http://cern.ch/ComputingRules defines the rules for the use of CERN computing facilities. One of the basic principles governing such use is that it must come within the professional duties of the user concerned, as defined by the user's divisional hierarchy. However, personal use of the computing facilities is tolerated or allowed provided : a) It is in compliance with Operational Circular N° 5 and not detrimental to official duties, including those of other users; b) the frequency and duration is limited and there is a negligible use of CERN resources; c) it does not constitute a political, commercial and/or profit-making activity; d) it is not...

  13. Succinct Representations of Permutations and Functions

    CERN Document Server

    Munro, J Ian; Raman, Venkatesh; Rao, S Srinivasa

    2011-01-01

    We investigate the problem of succinctly representing an arbitrary permutation, \\pi, on {0,...,n-1} so that \\pi^k(i) can be computed quickly for any i and any (positive or negative) integer power k. A representation taking (1+\\epsilon) n lg n + O(1) bits suffices to compute arbitrary powers in constant time, for any positive constant \\epsilon <= 1. A representation taking the optimal \\ceil{\\lg n!} + o(n) bits can be used to compute arbitrary powers in O(lg n / lg lg n) time. We then consider the more general problem of succinctly representing an arbitrary function, f: [n] \\rightarrow [n] so that f^k(i) can be computed quickly for any i and any integer power k. We give a representation that takes (1+\\epsilon) n lg n + O(1) bits, for any positive constant \\epsilon <= 1, and computes arbitrary positive powers in constant time. It can also be used to compute f^k(i), for any negative integer k, in optimal O(1+|f^k(i)|) time. We place emphasis on the redundancy, or the space beyond the information-theoretic l...

  14. Constrained Metric Learning by Permutation Inducing Isometries.

    Science.gov (United States)

    Bosveld, Joel; Mahmood, Arif; Huynh, Du Q; Noakes, Lyle

    2016-01-01

    The choice of metric critically affects the performance of classification and clustering algorithms. Metric learning algorithms attempt to improve performance, by learning a more appropriate metric. Unfortunately, most of the current algorithms learn a distance function which is not invariant to rigid transformations of images. Therefore, the distances between two images and their rigidly transformed pair may differ, leading to inconsistent classification or clustering results. We propose to constrain the learned metric to be invariant to the geometry preserving transformations of images that induce permutations in the feature space. The constraint that these transformations are isometries of the metric ensures consistent results and improves accuracy. Our second contribution is a dimension reduction technique that is consistent with the isometry constraints. Our third contribution is the formulation of the isometry constrained logistic discriminant metric learning (IC-LDML) algorithm, by incorporating the isometry constraints within the objective function of the LDML algorithm. The proposed algorithm is compared with the existing techniques on the publicly available labeled faces in the wild, viewpoint-invariant pedestrian recognition, and Toy Cars data sets. The IC-LDML algorithm has outperformed existing techniques for the tasks of face recognition, person identification, and object classification by a significant margin.

  15. Permutation centralizer algebras and multimatrix invariants

    Science.gov (United States)

    Mattioli, Paolo; Ramgoolam, Sanjaye

    2016-03-01

    We introduce a class of permutation centralizer algebras which underly the combinatorics of multimatrix gauge-invariant observables. One family of such noncommutative algebras is parametrized by two integers. Its Wedderburn-Artin decomposition explains the counting of restricted Schur operators, which were introduced in the physics literature to describe open strings attached to giant gravitons and were subsequently used to diagonalize the Gaussian inner product for gauge invariants of two-matrix models. The structure of the algebra, notably its dimension, its center and its maximally commuting subalgebra, is related to Littlewood-Richardson numbers for composing Young diagrams. It gives a precise characterization of the minimal set of charges needed to distinguish arbitrary matrix gauge invariants, which are related to enhanced symmetries in gauge theory. The algebra also gives a star product for matrix invariants. The center of the algebra allows efficient computation of a sector of multimatrix correlators. These generate the counting of a certain class of bicoloured ribbon graphs with arbitrary genus.

  16. Image encryption using a synchronous permutation-diffusion technique

    Science.gov (United States)

    Enayatifar, Rasul; Abdullah, Abdul Hanan; Isnin, Ismail Fauzi; Altameem, Ayman; Lee, Malrey

    2017-03-01

    In the past decade, the interest on digital images security has been increased among scientists. A synchronous permutation and diffusion technique is designed in order to protect gray-level image content while sending it through internet. To implement the proposed method, two-dimensional plain-image is converted to one dimension. Afterward, in order to reduce the sending process time, permutation and diffusion steps for any pixel are performed in the same time. The permutation step uses chaotic map and deoxyribonucleic acid (DNA) to permute a pixel, while diffusion employs DNA sequence and DNA operator to encrypt the pixel. Experimental results and extensive security analyses have been conducted to demonstrate the feasibility and validity of this proposed image encryption method.

  17. A Comparative Study on the Performance of Permutation Algorithms

    CERN Document Server

    Bassil, Youssef

    2012-01-01

    Permutation is the different arrangements that can be made with a given number of things taking some or all of them at a time. The notation P(n,r) is used to denote the number of permutations of n things taken r at a time. Permutation is used in various fields such as mathematics, group theory, statistics, and computing, to solve several combinatorial problems such as the job assignment problem and the traveling salesman problem. In effect, permutation algorithms have been studied and experimented for many years now. Bottom-Up, Lexicography, and Johnson-Trotter are three of the most popular permutation algorithms that emerged during the past decades. In this paper, we are implementing three of the most eminent permutation algorithms, they are respectively: Bottom-Up, Lexicography, and Johnson-Trotter algorithms. The implementation of each algorithm will be carried out using two different approaches: brute-force and divide and conquer. The algorithms codes will be tested using a computer simulation tool to mea...

  18. A hyper-chaos-based image encryption algorithm using pixel-level permutation and bit-level permutation

    Science.gov (United States)

    Li, Yueping; Wang, Chunhua; Chen, Hua

    2017-03-01

    Recently, a number of chaos-based image encryption algorithms that use low-dimensional chaotic map and permutation-diffusion architecture have been proposed. However, low-dimensional chaotic map is less safe than high-dimensional chaotic system. And permutation process is independent of plaintext and diffusion process. Therefore, they cannot resist efficiently the chosen-plaintext attack and chosen-ciphertext attack. In this paper, we propose a hyper-chaos-based image encryption algorithm. The algorithm adopts a 5-D multi-wing hyper-chaotic system, and the key stream generated by hyper-chaotic system is related to the original image. Then, pixel-level permutation and bit-level permutation are employed to strengthen security of the cryptosystem. Finally, a diffusion operation is employed to change pixels. Theoretical analysis and numerical simulations demonstrate that the proposed algorithm is secure and reliable for image encryption.

  19. Single fluorescent protein-based Ca2+ sensors with increased dynamic range

    Directory of Open Access Journals (Sweden)

    Labas Yulii A

    2007-06-01

    Full Text Available Abstract Background Genetically encoded sensors developed on the basis of green fluorescent protein (GFP-like proteins are becoming more and more popular instruments for monitoring cellular analytes and enzyme activities in living cells and transgenic organisms. In particular, a number of Ca2+ sensors have been developed, either based on FRET (Fluorescence Resonance Energy Transfer changes between two GFP-mutants or on the change in fluorescence intensity of a single circularly permuted fluorescent protein (cpFP. Results Here we report significant progress on the development of the latter type of Ca2+ sensors. Derived from the knowledge of previously reported cpFP-based sensors, we generated a set of cpFP-based indicators with different spectral properties and fluorescent responses to changes in Ca2+ concentration. Two variants, named Case12 and Case16, were characterized by particular high brightness and superior dynamic range, up to 12-fold and 16.5-fold increase in green fluorescence between Ca2+-free and Ca2+-saturated forms. We demonstrated the high potential of these sensors on various examples, including monitoring of Ca2+ response to a prolonged glutamate treatment in cortical neurons. Conclusion We believe that expanded dynamic range, high brightness and relatively high pH-stability should make Case12 and Case16 popular research tools both in scientific studies and high throughput screening assays.

  20. ADMINISTRATIVE CIRCULARS

    CERN Multimedia

    Division des ressources humaines

    2000-01-01

    N° 2 (Rev. 1) - March 2000Guidelines and procedures concerning recruitment and probation period of staff membersN° 9 (Rev. 2) - March 2000Staff members contractsN° 16 (Rev. 2) - January 2000TrainingN° 30 (Rev. 1) - January 2000Indemnities and reimbursements upon taking up appointment and termination of contractN° 32 - February 2000Principles and procedures governing complaints of harassmentThese circular have been amended (No 2, N° 9, N° 16 and N° 30) or drawn up (N° 32).Copies are available in the Divisional Secretariats.Note:\tAdministrative and operational circulars, as well as the lists of those in force, are available for consultation in the server SRV4_Home in the Appletalk zone NOVELL (as GUEST or using your Novell username and password), volume PE Division Data Disk.The Word files are available in the folder COM, folder Public, folder ADM.CIRC.docHuman Resources DivisionTel. 74128

  1. Permutation Complexity and Coupling Measures in Hidden Markov Models

    Directory of Open Access Journals (Sweden)

    Taichi Haruna

    2013-09-01

    Full Text Available Recently, the duality between values (words and orderings (permutations has been proposed by the authors as a basis to discuss the relationship between information theoretic measures for finite-alphabet stationary stochastic processes and their permutatio nanalogues. It has been used to give a simple proof of the equality between the entropy rate and the permutation entropy rate for any finite-alphabet stationary stochastic process and to show some results on the excess entropy and the transfer entropy for finite-alphabet stationary ergodic Markov processes. In this paper, we extend our previous results to hidden Markov models and show the equalities between various information theoretic complexity and coupling measures and their permutation analogues. In particular, we show the following two results within the realm of hidden Markov models with ergodic internal processes: the two permutation analogues of the transfer entropy, the symbolic transfer entropy and the transfer entropy on rank vectors, are both equivalent to the transfer entropy if they are considered as the rates, and the directed information theory can be captured by the permutation entropy approach.

  2. Permutation-based Homogeneous Block Content Authentication for Watermarking

    Directory of Open Access Journals (Sweden)

    S.Maruthuperumal

    2013-02-01

    Full Text Available In modern days, digital watermarking has become an admired technique for hitting data in digital images to help guard against copyright infringement. The proposed Permutation-based Homogeneous Block Content authentication (PHBC methods develop a secure and excellence strong watermarking algorithm that combines the reward of permutation-based Homogeneous block (PHB with that of significant and insignificant bit values with X0R encryption function using Max coefficient of least coordinate value for embedding the watermark. In the projected system uses the relationship between the permutation blocks to embed many data into Homogeneous blocks without causing solemn distortion to the watermarked image. The experimental results show that the projected system is very efficient in achieving perceptual invisibility with an increase in the Peak Signal to Noise Ratio (PSNR. Moreover, the projected system is robust to a variety of signal processing operations, such as image Cropping, Rotation, Resizing, Adding noise, Filtering , Blurring and Motion blurring.

  3. Permutations and the combinatorics of gauge invariants for general N

    CERN Document Server

    Ramgoolam, Sanjaye

    2016-01-01

    Group algebras of permutations have proved highly useful in solving a number of problems in large N gauge theories. I review the use of permutations in classifying gauge invariants in one-matrix and multi-matrix models and computing their correlators. These methods are also applicable to tensor models and have revealed a link between tensor models and the counting of branched covers. The key idea is to parametrize $U(N)$ gauge invariants using permutations, subject to equivalences. Correlators are related to group theoretic properties of these equivalence classes. Fourier transformation on symmetric groups by means of representation theory offers nice bases of functions on these equivalence classes. This has applications in AdS/CFT in identifying CFT duals of giant gravitons and their perturbations. It has also lead to general results on quiver gauge theory correlators, uncovering links to two dimensional topological field theory and the combinatorics of trace monoids.

  4. Enumeration of snakes and cycle-alternating permutations

    CERN Document Server

    Josuat-Vergès, Matthieu

    2010-01-01

    Springer numbers are an analog of Euler numbers for the group of signed permutations. Arnol'd showed that they count some objects called snakes, that generalize alternating permutations. Hoffman established a link between Springer numbers, snakes, and some polynomials related with the successive derivatives of trigonometric functions. The goal of this article is to give further combinatorial properties of derivative polynomials, in terms of snakes and other objects: cycle-alternating permutations, weighted Dyck or Motzkin paths, increasing trees and forests. We obtain the generating functions, in terms of trigonometric functions for exponential ones and in terms of J-fractions for ordinary ones. We also define natural q-analogs, make a link with normal ordering problems and combinatorial theory of differential equations.

  5. Determination of Pavement Rehabilitation Activities through a Permutation Algorithm

    Directory of Open Access Journals (Sweden)

    Sangyum Lee

    2013-01-01

    Full Text Available This paper presents a mathematical programming model for optimal pavement rehabilitation planning. The model maximized the rehabilitation area through a newly developed permutation algorithm, based on the procedures outlined in the harmony search (HS algorithm. Additionally, the proposed algorithm was based on an optimal solution method for the problem of multilocation rehabilitation activities on pavement structure, using empirical deterioration and rehabilitation effectiveness models, according to a limited maintenance budget. Thus, nonlinear pavement performance and rehabilitation activity decision models were used to maximize the objective functions of the rehabilitation area within a limited budget, through the permutation algorithm. Our results showed that the heuristic permutation algorithm provided a good optimum in terms of maximizing the rehabilitation area, compared with a method of the worst-first maintenance currently used in Seoul.

  6. Normal approximations for descents and inversions of permutations of multisets

    OpenAIRE

    Conger, Mark; Viswanath, D.

    2005-01-01

    Normal approximations for descents and inversions of permutations of the set $\\{1,2,...,n\\}$ are well known. A number of sequences that occur in practice, such as the human genome and other genomes, contain many repeated elements. Motivated by such examples, we consider the number of inversions of a permutation $\\pi(1), \\pi(2),...,\\pi(n)$ of a multiset with $n$ elements, which is the number of pairs $(i,j)$ with $1\\leq i \\pi(j)$. The number of descents is the number of...

  7. Secure physical layer using dynamic permutations in cognitive OFDMA systems

    DEFF Research Database (Denmark)

    Meucci, F.; Wardana, Satya Ardhy; Prasad, Neeli R.

    2009-01-01

    This paper proposes a novel lightweight mechanism for a secure Physical (PHY) layer in Cognitive Radio Network (CRN) using Orthogonal Frequency Division Multiplexing (OFDM). User's data symbols are mapped over the physical subcarriers with a permutation formula. The PHY layer is secured...... of the permutations are analyzed for several DSA patterns. Simulations are performed according to the parameters of the IEEE 802.16e system model. The securing mechanism proposed provides intrinsic PHY layer security and it can be easily implemented in the current IEEE 802.16 standard applying almost negligible...

  8. Permutation entropy of fractional Brownian motion and fractional Gaussian noise

    Energy Technology Data Exchange (ETDEWEB)

    Zunino, L. [Centro de Investigaciones Opticas, C.C. 124 Correo Central, 1900 La Plata (Argentina); Departamento de Ciencias Basicas, Facultad de Ingenieria, Universidad Nacional de La Plata (UNLP), 1900 La Plata (Argentina); Departamento de Fisica, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, 1900 La Plata (Argentina)], E-mail: lucianoz@ciop.unlp.edu.ar; Perez, D.G. [Instituto de Fisica, Pontificia Universidad Catolica de Valparaiso (PUCV), 23-40025 Valparaiso (Chile)], E-mail: dario.perez@ucv.cl; Martin, M.T. [Instituto de Fisica (IFLP), Facultad de Ciencias Exactas, Universidad Nacional de La Plata and Argentina' s National Council (CCT-CONICET), C.C. 727, 1900 La Plata (Argentina)], E-mail: mtmartin@fisica.unlp.edu.ar; Garavaglia, M. [Centro de Investigaciones Opticas, C.C. 124 Correo Central, 1900 La Plata (Argentina); Departamento de Fisica, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, 1900 La Plata (Argentina)], E-mail: garavagliam@ciop.unlp.edu.ar; Plastino, A. [Instituto de Fisica (IFLP), Facultad de Ciencias Exactas, Universidad Nacional de La Plata and Argentina' s National Council (CCT-CONICET), C.C. 727, 1900 La Plata (Argentina)], E-mail: plastino@fisica.unlp.edu.ar; Rosso, O.A. [Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, School of Electrical Engineering and Computer Science, The University of Newcastle, University Drive, Callaghan NSW 2308 (Australia); Chaos and Biology Group, Instituto de Calculo, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellon II, Ciudad Universitaria, 1428 Ciudad de Buenos Aires (Argentina)], E-mail: oarosso@fibertel.com.ar

    2008-06-30

    We have worked out theoretical curves for the permutation entropy of the fractional Brownian motion and fractional Gaussian noise by using the Bandt and Shiha [C. Bandt, F. Shiha, J. Time Ser. Anal. 28 (2007) 646] theoretical predictions for their corresponding relative frequencies. Comparisons with numerical simulations show an excellent agreement. Furthermore, the entropy-gap in the transition between these processes, observed previously via numerical results, has been here theoretically validated. Also, we have analyzed the behaviour of the permutation entropy of the fractional Gaussian noise for different time delays.

  9. On permutation symmetries of hopfield model neural network

    Directory of Open Access Journals (Sweden)

    Jiyang Dong

    2001-01-01

    Full Text Available Discrete Hopfield neural network (DHNN is studied by performing permutation operations on the synaptic weight matrix. The storable patterns set stored with Hebbian learning algorithm in a network without losing memories is studied, and a condition which makes sure all the patterns of the storable patterns set have a same basin size of attraction is proposed. Then, the permutation symmetries of the network are studied associating with the stored patterns set. A construction of the storable patterns set satisfying that condition is achieved by consideration of their invariance under a point group.

  10. Versatile platform for nanotechnology based on circular permutations of chaperonin protein

    Science.gov (United States)

    Paavola, Chad D. (Inventor); Trent, Jonathan D. (Inventor); Chan, Suzanne L. (Inventor); Li, Yi-Fen (Inventor); McMillan, R. Andrew (Inventor); Kagawa, Hiromi (Inventor)

    2010-01-01

    The present invention provides chaperonin polypeptides which are modified to include N-terminal and C-terminal ends that are relocated from the central pore region to various different positions in the polypeptide which are located on the exterior of the folded modified chaperonin polypeptide. In the modified chaperonin polypeptide, the naturally-occurring N-terminal and C-terminal ends are joined together directly or with an intervening linker peptide sequence. The relocated N-terminal or C-terminal ends can be covalently joined to, or bound with another molecule such as a nucleic acid molecule, a lipid, a carbohydrate, a second polypeptide, or a nanoparticle. The modified chaperonin polypeptides can assemble into double-ringed chaperonin structures. Further, the chaperonin structures can organize into higher order structures such as nanofilaments or nanoarrays which can be used to produce nanodevices and nanocoatings.

  11. Glycerol acyl-transfer kinetics of a circular permutated Candida antarctica Lipase B

    Science.gov (United States)

    Triacylglycerols containing a high abundance of unusual fatty acids, such as y-linolenic acid, or novel arylaliphatic acids, such as ferulic acid, are useful in pharmaceutical and cosmeceutical applications. Candida antarctica lipase B (CALB) is quite often used for non-aqueous synthesis, although ...

  12. Circular causality.

    Science.gov (United States)

    Thomas, R

    2006-07-01

    The problem of disentangling complex dynamic systems is addressed, especially with a view to identifying those variables that take part in the essential qualitative behaviour of systems. The author presents a series of reflections about the methods of formalisation together with the principles that govern the global operation of systems. In particular, a section on circuits, nuclei, and circular causality and a rather detailed description of the analytic use of the generalised asynchronous logical description, together with a brief description of its synthetic use (OreverseO logic). Some basic rules are recalled, such as the fact that a positive circuit is a necessary condition of multistationarity. Also, the interest of considering as a model, rather than a well-defined set of differential equations, a variety of systems that differ from each other only by the values of constant terms is emphasised. All these systems have a common Jacobian matrix and for all of them phase space has exactly the same structure. It means that all can be partitioned in the same way as regards the signs of the eigenvalues and thus as regards the precise nature of any steady states that might be present. Which steady states are actually present, depends on the values of terms of order zero in the ordinary differential equations (ODEs), and it is easy to find for which values of these terms a given point in phase space is steady. Models can be synthesised first at the level of the circuits involved in the Jacobian matrix (that determines which types and numbers of steady states are consistent with the model), then only at the level of terms of order zero in the ODE's (that determines which of the steady states actually exist), hence the title 'Circular casuality'.

  13. Permutation Matrix Method for Dense Coding Using GHZ States

    Institute of Scientific and Technical Information of China (English)

    JIN Rui-Bo; CHEN Li-Bing; WANG Fa-Qiang; SU Zhi-Kun

    2008-01-01

    We present a new method called the permutation matrix method to perform dense coding using Greenberger-Horne-Zeilinger (GHZ) states. We show that this method makes the study of dense coding systematically and regularly. It also has high potential to be realized physically.

  14. Mixing Times of Self-Organizing Lists and Biased Permutations

    CERN Document Server

    Bhakta, Prateek; Randall, Dana; Streib, Amanda Pascoe

    2012-01-01

    Sampling permutations from S_n is a fundamental problem from probability theory. The nearest neighbor transposition chain \\cal{M}}_{nn} is known to converge in time \\Theta(n^3 \\log n) in the uniform case and time \\Theta(n^2) in the constant bias case, in which we put adjacent elements in order with probability p \

  15. A permutation test for the race model inequality

    DEFF Research Database (Denmark)

    Gondan, Matthias

    2010-01-01

    signals. Several statistical procedures have been used for testing the race model inequality. However, the commonly employed procedure does not control the Type I error. In this article a permutation test is described that keeps the Type I error at the desired level. Simulations show that the power...

  16. Boson permutation and parity operators: Lie algebra and applications

    Energy Technology Data Exchange (ETDEWEB)

    Campos, Richard A. [Department of Physics and Astronomy, Lehman College, City University of New York, 250 Bedford Boulevard West, Bronx, NY 10468-1589 (United States)]. E-mail: richard.campos@mailaps.org; Gerry, Christopher C. [Department of Physics and Astronomy, Lehman College, City University of New York, 250 Bedford Boulevard West, Bronx, NY 10468-1589 (United States)

    2006-08-14

    We show that dichotomic permutation and parity operators for a two-dimensional boson system form an su(2) algebra with a unitary operator that relates, in quantum optics, to a balanced beamsplitter. The algebra greatly simplifies the input-output transformations of states through quantum nonlinear systems such as the Kerr interferometer or the kicked top.

  17. SELF-DUAL PERMUTATION CODES OVER FORMAL POWER SERIES RINGS AND FINITE PRINCIPAL IDEAL RINGS

    Institute of Scientific and Technical Information of China (English)

    张光辉; 刘宏伟

    2013-01-01

    In this paper, we study self-dual permutation codes over formal power series rings and finite principal ideal rings. We first give some results on the torsion codes associated with the linear codes over formal power series rings. These results allow for obtaining some conditions for non-existence of self-dual permutation codes over formal power series rings. Finally, we describe self-dual permutation codes over finite principal ideal rings by examining permutation codes over their component chain rings.

  18. Non-parametric combination and related permutation tests for neuroimaging.

    Science.gov (United States)

    Winkler, Anderson M; Webster, Matthew A; Brooks, Jonathan C; Tracey, Irene; Smith, Stephen M; Nichols, Thomas E

    2016-04-01

    In this work, we show how permutation methods can be applied to combination analyses such as those that include multiple imaging modalities, multiple data acquisitions of the same modality, or simply multiple hypotheses on the same data. Using the well-known definition of union-intersection tests and closed testing procedures, we use synchronized permutations to correct for such multiplicity of tests, allowing flexibility to integrate imaging data with different spatial resolutions, surface and/or volume-based representations of the brain, including non-imaging data. For the problem of joint inference, we propose and evaluate a modification of the recently introduced non-parametric combination (NPC) methodology, such that instead of a two-phase algorithm and large data storage requirements, the inference can be performed in a single phase, with reasonable computational demands. The method compares favorably to classical multivariate tests (such as MANCOVA), even when the latter is assessed using permutations. We also evaluate, in the context of permutation tests, various combining methods that have been proposed in the past decades, and identify those that provide the best control over error rate and power across a range of situations. We show that one of these, the method of Tippett, provides a link between correction for the multiplicity of tests and their combination. Finally, we discuss how the correction can solve certain problems of multiple comparisons in one-way ANOVA designs, and how the combination is distinguished from conjunctions, even though both can be assessed using permutation tests. We also provide a common algorithm that accommodates combination and correction.

  19. Circular dichroism and fluorescence spectroscopy of cysteinyl-tRNA synthetase from Halobacterium salinarum ssp. NRC-1 demonstrates that group I cations are particularly effective in providing structure and stability to this halophilic protein.

    Directory of Open Access Journals (Sweden)

    Christopher J Reed

    Full Text Available Proteins from extremophiles have the ability to fold and remain stable in their extreme environment. Here, we investigate the presence of this effect in the cysteinyl-tRNA synthetase from Halobacterium salinarum ssp. NRC-1 (NRC-1, which was used as a model halophilic protein. The effects of salt on the structure and stability of NRC-1 and of E. coli CysRS were investigated through far-UV circular dichroism (CD spectroscopy, fluorescence spectroscopy, and thermal denaturation melts. The CD of NRC-1 CysRS was examined in different group I and group II chloride salts to examine the effects of the metal ions. Potassium was observed to have the strongest effect on NRC-1 CysRS structure, with the other group I salts having reduced strength. The group II salts had little effect on the protein. This suggests that the halophilic adaptations in this protein are mediated by potassium. CD and fluorescence spectra showed structural changes taking place in NRC-1 CysRS over the concentration range of 0-3 M KCl, while the structure of E. coli CysRS was relatively unaffected. Salt was also shown to increase the thermal stability of NRC-1 CysRS since the melt temperature of the CysRS from NRC-1 was increased in the presence of high salt, whereas the E. coli enzyme showed a decrease. By characterizing these interactions, this study not only explains the stability of halophilic proteins in extremes of salt, but also helps us to understand why and how group I salts stabilize proteins in general.

  20. Characterization of the 1st and 2nd EF-hands of NADPH oxidase 5 by fluorescence, isothermal titration calorimetry, and circular dichroism

    Directory of Open Access Journals (Sweden)

    Wei Chin-Chuan

    2012-04-01

    Full Text Available Abstract Background Superoxide generated by non-phagocytic NADPH oxidases (NOXs is of growing importance for physiology and pathobiology. The calcium binding domain (CaBD of NOX5 contains four EF-hands, each binding one calcium ion. To better understand the metal binding properties of the 1st and 2nd EF-hands, we characterized the N-terminal half of CaBD (NCaBD and its calcium-binding knockout mutants. Results The isothermal titration calorimetry measurement for NCaBD reveals that the calcium binding of two EF-hands are loosely associated with each other and can be treated as independent binding events. However, the Ca2+ binding studies on NCaBD(E31Q and NCaBD(E63Q showed their binding constants to be 6.5 × 105 and 5.0 × 102 M-1 with ΔHs of -14 and -4 kJ/mol, respectively, suggesting that intrinsic calcium binding for the 1st non-canonical EF-hand is largely enhanced by the binding of Ca2+ to the 2nd canonical EF-hand. The fluorescence quenching and CD spectra support a conformational change upon Ca2+ binding, which changes Trp residues toward a more non-polar and exposed environment and also increases its α-helix secondary structure content. All measurements exclude Mg2+-binding in NCaBD. Conclusions We demonstrated that the 1st non-canonical EF-hand of NOX5 has very weak Ca2+ binding affinity compared with the 2nd canonical EF-hand. Both EF-hands interact with each other in a cooperative manner to enhance their Ca2+ binding affinity. Our characterization reveals that the two EF-hands in the N-terminal NOX5 are Ca2+ specific. Graphical abstract

  1. Sensitive detection of p65 homodimers using red-shifted and fluorescent protein-based FRET couples.

    Directory of Open Access Journals (Sweden)

    Joachim Goedhart

    Full Text Available BACKGROUND: Fluorescence Resonance Energy Transfer (FRET between the green fluorescent protein (GFP variants CFP and YFP is widely used for the detection of protein-protein interactions. Nowadays, several monomeric red-shifted fluorescent proteins are available that potentially improve the efficiency of FRET. METHODOLOGY/PRINCIPAL FINDINGS: To allow side-by-side comparison of several fluorescent protein combinations for detection of FRET, yellow or orange fluorescent proteins were directly fused to red fluorescent proteins. FRET from yellow fluorescent proteins to red fluorescent proteins was detected by both FLIM and donor dequenching upon acceptor photobleaching, showing that mCherry and mStrawberry were more efficient acceptors than mRFP1. Circular permutated yellow fluorescent protein variants revealed that in the tandem constructs the orientation of the transition dipole moment influences the FRET efficiency. In addition, it was demonstrated that the orange fluorescent proteins mKO and mOrange are both suitable as donor for FRET studies. The most favorable orange-red FRET pair was mKO-mCherry, which was used to detect homodimerization of the NF-kappaB subunit p65 in single living cells, with a threefold higher lifetime contrast and a twofold higher FRET efficiency than for CFP-YFP. CONCLUSIONS/SIGNIFICANCE: The observed high FRET efficiency of red-shifted couples is in accordance with increased Förster radii of up to 64 A, being significantly higher than the Förster radius of the commonly used CFP-YFP pair. Thus, red-shifted FRET pairs are preferable for detecting protein-protein interactions by donor-based FRET methods in single living cells.

  2. A chronicle of permutation statistical methods 1920–2000, and beyond

    CERN Document Server

    Berry, Kenneth J; Mielke Jr , Paul W

    2014-01-01

    The focus of this book is on the birth and historical development of permutation statistical methods from the early 1920s to the near present. Beginning with the seminal contributions of R.A. Fisher, E.J.G. Pitman, and others in the 1920s and 1930s, permutation statistical methods were initially introduced to validate the assumptions of classical statistical methods. Permutation methods have advantages over classical methods in that they are optimal for small data sets and non-random samples, are data-dependent, and are free of distributional assumptions. Permutation probability values may be exact, or estimated via moment- or resampling-approximation procedures. Because permutation methods are inherently computationally-intensive, the evolution of computers and computing technology that made modern permutation methods possible accompanies the historical narrative. Permutation analogs of many well-known statistical tests are presented in a historical context, including multiple correlation and regression, ana...

  3. Permutation based speech scrambling for next generation mobile communication

    Directory of Open Access Journals (Sweden)

    Dhanya G

    2016-04-01

    Full Text Available Scrambling is a really significant method that provides protection in communication systems by using random permutation and pseudorandom binary scrambling method. To enhance the security in communication, OFDM scrambling can provide better protection than an FFT scrambler under same permutation operation. To evaluate the quality of the proposed system, perceptual evaluation of speech quality is used. The objective test SNR and BER are used to estimate the noise performance of the system. STI and CIS were applied to know the performance of the system. From the simulations, it is clear that, the proposed system shows better performance than conventional scrambling technique and it is more robust in the 4th generation of mobile communication.

  4. Computational Approaches to Consecutive Pattern Avoidance in Permutations

    CERN Document Server

    Nakamura, Brian

    2011-01-01

    In recent years, there has been increasing interest in consecutive pattern avoidance in permutations. In this paper, we introduce two approaches to counting permutations that avoid a set of prescribed patterns consecutively. These algoritms have been implemented in the accompanying Maple package CAV, which can be downloaded from the author's website. As a byproduct of the first algorithm, we have a theorem giving a sufficient condition for when two pattern sets are strongly (consecutively) Wilf-Equivalent. For the implementation of the second algorithm, we define the cluster tail generating function and show that it always satisfies a certain functional equation. We also explain how the CAV package can be used to approximate asymptotic constants for single pattern avoidance.

  5. A Weak Quantum Blind Signature with Entanglement Permutation

    Science.gov (United States)

    Lou, Xiaoping; Chen, Zhigang; Guo, Ying

    2015-09-01

    Motivated by the permutation encryption algorithm, a weak quantum blind signature (QBS) scheme is proposed. It involves three participants, including the sender Alice, the signatory Bob and the trusted entity Charlie, in four phases, i.e., initializing phase, blinding phase, signing phase and verifying phase. In a small-scale quantum computation network, Alice blinds the message based on a quantum entanglement permutation encryption algorithm that embraces the chaotic position string. Bob signs the blinded message with private parameters shared beforehand while Charlie verifies the signature's validity and recovers the original message. Analysis shows that the proposed scheme achieves the secure blindness for the signer and traceability for the message owner with the aid of the authentic arbitrator who plays a crucial role when a dispute arises. In addition, the signature can neither be forged nor disavowed by the malicious attackers. It has a wide application to E-voting and E-payment system, etc.

  6. A WATERMARKING ALGORITHM BASED ON PERMUTATION AND 2-D BARCODE

    Institute of Scientific and Technical Information of China (English)

    Ji Zhen; Zhang Jihong; Xie Weixin

    2001-01-01

    This letter presents a method for digital image watermarking for copyright protection. This technique produces a watermarked image that closely retains the quality of the original host image while concurrently surviving various image processing operations such as lowpass/highpass filtering, lossy JPEG compression, and cropping. This image watermarking algorithm takes full advantage of permutation and 2-D barcode (PDF417). The actual watermark embedding in spatial domain is followed using permutated image for improving the resistance to image cropping. Much higher watermark robustness is obtainable via a simple forward error correction technique, which is the main feature of PDF417 codes. Additional features of this technique include the easy determination of the existence of the watermark and that the watermark verification procedure does not need the original host image. The experimental results demonstrate its effectiveness.

  7. Multivariate Permutation Polynomial Systems and Nonlinear Pseudorandom Number Generators

    CERN Document Server

    Ostafe, Alina

    2009-01-01

    In this paper we study a class of dynamical systems generated by iterations of multivariate permutation polynomial systems which lead to polynomial growth of the degrees of these iterations. Using these estimates and the same techniques studied previously for inversive generators, we bound exponential sums along the orbits of these dynamical systems and show that they admit much stronger estimates on average over all initial values than in the general case and thus can be of use for pseudorandom number generation.

  8. Information sets as permutation cycles for quadratic residue codes

    Directory of Open Access Journals (Sweden)

    Richard A. Jenson

    1982-01-01

    Full Text Available The two cases p=7 and p=23 are the only known cases where the automorphism group of the [p+1,   (p+1/2] extended binary quadratic residue code, O(p, properly contains PSL(2,p. These codes have some of their information sets represented as permutation cycles from Aut(Q(p. Analysis proves that all information sets of Q(7 are so represented but those of Q(23 are not.

  9. A Note on Primitive Permutation Groups of Prime Power Degree

    OpenAIRE

    Qian Cai; Hua Zhang

    2015-01-01

    Primitive permutation groups of prime power degree are known to be affine type, almost simple type, and product action type. At the present stage finding an explicit classification of primitive groups of affine type seems untractable, while the product action type can usually be reduced to almost simple type. In this paper, we present a short survey of the development of primitive groups of prime power degree, together with a brief description on such groups.

  10. The torus and the Klein Bottle amplitude of permutation orbifolds

    CERN Document Server

    Kadar, Z

    2000-01-01

    The torus and the Klein bottle amplitude coefficients are computed in permutation orbifolds of RCFT-s in terms of the same quantities in the original theory and the twist group. An explicit expression is presented for the number of self conjugate primaries in the orbifold as a polynomial of the total number of primaries and the number of self conjugate ones in the parent theory. The formulae in the $Z_2$ orbifold illustrate the general results.

  11. Successful attack on permutation-parity-machine-based neural cryptography.

    Science.gov (United States)

    Seoane, Luís F; Ruttor, Andreas

    2012-02-01

    An algorithm is presented which implements a probabilistic attack on the key-exchange protocol based on permutation parity machines. Instead of imitating the synchronization of the communicating partners, the strategy consists of a Monte Carlo method to sample the space of possible weights during inner rounds and an analytic approach to convey the extracted information from one outer round to the next one. The results show that the protocol under attack fails to synchronize faster than an eavesdropper using this algorithm.

  12. Counting permutations with no long monotone subsequence via generating trees

    CERN Document Server

    Bousquet-Mélou, Mireille

    2010-01-01

    We recover Gessel's determinantal formula for the generating function of permutations with no ascending subsequence of length m+1. The starting point of our proof is the recursive construction of these permutations by insertion of the largest entry. This construction is of course extremely simple. The cost of this simplicity is that we need to take into account in the enumeration m-1 additional parameters --- namely, the positions of the leftmost increasing subsequences of length i, for i=2,...,m. This yields for the generating function a functional equation with m-1 "catalytic" variables, and the heart of the paper is the solution of this equation. We perform a similar task for involutions with no descending subsequence of length m+1, constructed recursively by adding a cycle containing the largest entry. We refine this result by keeping track of the number of fixed points. In passing, we prove that the ordinary generating functions of these families of permutations can be expressed as constant terms of rati...

  13. The Permutation Groups and the Equivalence of Cyclic and Quasi-Cyclic Codes

    CERN Document Server

    Guenda, Kenza

    2010-01-01

    We give the class of finite groups which arise as the permutation groups of cyclic codes over finite fields. Furthermore, we extend the results of Brand and Huffman et al. and we find the properties of the set of permutations by which two cyclic codes of length p^r can be equivalent. We also find the set of permutations by which two quasi-cyclic codes can be equivalent.

  14. PERMUTATION-BASED POLYMORPHIC STEGO-WATERMARKS FOR PROGRAM CODES

    Directory of Open Access Journals (Sweden)

    Denys Samoilenko

    2016-06-01

    Full Text Available Purpose: One of the most actual trends in program code protection is code marking. The problem consists in creation of some digital “watermarks” which allow distinguishing different copies of the same program codes. Such marks could be useful for authority protection, for code copies numbering, for program propagation monitoring, for information security proposes in client-server communication processes. Methods: We used the methods of digital steganography adopted for program codes as text objects. The same-shape symbols method was transformed to same-semantic element method due to codes features which makes them different from ordinary texts. We use dynamic principle of marks forming making codes similar to be polymorphic. Results: We examined the combinatorial capacity of permutations possible in program codes. As a result it was shown that the set of 5-7 polymorphic variables is suitable for the most modern network applications. Marks creation and restoration algorithms where proposed and discussed. The main algorithm is based on full and partial permutations in variables names and its declaration order. Algorithm for partial permutation enumeration was optimized for calculation complexity. PHP code fragments which realize the algorithms were listed. Discussion: Methodic proposed in the work allows distinguishing of each client-server connection. In a case if a clone of some network resource was found the methodic could give information about included marks and thereby data on IP, date and time, authentication information of client copied the resource. Usage of polymorphic stego-watermarks should improve information security indexes in network communications.

  15. Dyck Paths, Standard Young Tableaux, and Pattern Avoiding Permutations

    CERN Document Server

    Gudmundsson, Hilmar

    2009-01-01

    We present a generating function and a closed counting formula in two variables that enumerate a family of classes of permutations that avoid or contain an increasing pattern of length three and have a prescribed number of occurrences of another pattern of length three. This gives a refinement of some previously studied statistics, most notably one by Noonan. The formula is also shown to enumerate a family of classes of Dyck paths and Standard Young Tableaux, and a bijection is given between the corresponding classes of these two families of objects. Finally, the results obtained are used to solve an optimization problem for a certain card game.

  16. Genuine multipartite nonlocality of permutationally invariant Gaussian states

    CERN Document Server

    Xu, Buqing; Adesso, Gerardo

    2016-01-01

    We investigate genuine multipartite nonlocality of pure permutationally invariant multimode Gaussian states of continuous variable systems, as detected by the violation of Svetlichny inequality. We identify the phase space settings leading to the largest violation of the inequality when using displaced parity measurements, distinguishing between even and odd number of modes. We further consider pseudospin measurements and show that, for three-mode states with asymptotically large squeezing degree, particular settings of these measurements allow one to approach the maximum violation allowed by quantum mechanics. This indicates that the highest possible genuine multipartite quantum nonlocality is in principle verifiable on Gaussian states.

  17. Some open questions in the theory of generalized permutable subgroups

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    A subgroup H of a group G is said to be weakly s-supplemented in G if H has a supplement T in G such that H ∩ T HsG, where HsG is the largest s-permutable subgroup of G contained in H. This paper constructs an example to show that the open questions 6.3 and 6.4 in J Algebra, 315: 192–209 (2007) have negative solutions, and shows that in many cases Question 6.4 is positive. A series of known results are unified and generalized.

  18. Permutation Groups with Bounded Movement having Maximum Orbits

    Indian Academy of Sciences (India)

    Mehdi Alaeiyan; Behnam Razzaghmaneshi

    2012-05-01

    Let be a permutation group on a set with no fixed points in and let be a positive integer. If no element of moves any subset of by more than points (that is, $|^g\\backslash|≤ m$ for every $\\subseteq$ and $g\\in G$), and also if each -orbit has size greater than 2, then the number of -orbits in is at most $\\frac{1}{2}(3m-1)$. Moreover, the equality holds if and only if is an elementary abelian 3-group.

  19. Tri-Permuting Mixing Matrix and predictions for theta_13

    CERN Document Server

    Bazzocchi, F

    2011-01-01

    We introduce a new texture for neutrino mixing named Tri-Permuting (TP) mixing matrix. This pattern is characterized by maximal solar and atmospheric angles and by a large reactor angle satisfying sin(theta_13)=1/3. The correct lepton mixing matrix is obtained when combining the charged lepton mixing matrix with the neutrino one. In this way we get new predictions for theta_13 with respect to those obtained by the well studied TBM or BM mixing patterns. We present a specific model that gives rise to TP mixing in the neutrino sector as well as the required corrections from the charged lepton one.

  20. Learning Combinatorial Map Information from Permutations of Landmarks

    Science.gov (United States)

    2010-10-04

    Learning Combinatorial Map Information from Permutations of Landmarks Benjamı́n Tovar ∗, Luigi Freda†, and Steven M. LaValle‡ Abstract This paper...is B. Tovar . This work was founded by NSF grant 0904501 (IIS robotics), DARPA SToMP grant HR0011-05-1-0008, and MURI/ONR grant N00014-09-1-1052. ∗B... Tovar is with the Dept. of Mechanical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 602081, USA. email: b- tovar

  1. Exploiting Lipid Permutation Symmetry to Compute Membrane Remodeling Free Energies

    Science.gov (United States)

    Bubnis, Greg; Risselada, Herre Jelger; Grubmüller, Helmut

    2016-10-01

    A complete physical description of membrane remodeling processes, such as fusion or fission, requires knowledge of the underlying free energy landscapes, particularly in barrier regions involving collective shape changes, topological transitions, and high curvature, where Canham-Helfrich (CH) continuum descriptions may fail. To calculate these free energies using atomistic simulations, one must address not only the sampling problem due to high free energy barriers, but also an orthogonal sampling problem of combinatorial complexity stemming from the permutation symmetry of identical lipids. Here, we solve the combinatorial problem with a permutation reduction scheme to map a structural ensemble into a compact, nondegenerate subregion of configuration space, thereby permitting straightforward free energy calculations via umbrella sampling. We applied this approach, using a coarse-grained lipid model, to test the CH description of bending and found sharp increases in the bending modulus for curvature radii below 10 nm. These deviations suggest that an anharmonic bending term may be required for CH models to give quantitative energetics of highly curved states.

  2. Genetic algorithms with permutation coding for multiple sequence alignment.

    Science.gov (United States)

    Ben Othman, Mohamed Tahar; Abdel-Azim, Gamil

    2013-08-01

    Multiple sequence alignment (MSA) is one of the topics of bio informatics that has seriously been researched. It is known as NP-complete problem. It is also considered as one of the most important and daunting tasks in computational biology. Concerning this a wide number of heuristic algorithms have been proposed to find optimal alignment. Among these heuristic algorithms are genetic algorithms (GA). The GA has mainly two major weaknesses: it is time consuming and can cause local minima. One of the significant aspects in the GA process in MSA is to maximize the similarities between sequences by adding and shuffling the gaps of Solution Coding (SC). Several ways for SC have been introduced. One of them is the Permutation Coding (PC). We propose a hybrid algorithm based on genetic algorithms (GAs) with a PC and 2-opt algorithm. The PC helps to code the MSA solution which maximizes the gain of resources, reliability and diversity of GA. The use of the PC opens the area by applying all functions over permutations for MSA. Thus, we suggest an algorithm to calculate the scoring function for multiple alignments based on PC, which is used as fitness function. The time complexity of the GA is reduced by using this algorithm. Our GA is implemented with different selections strategies and different crossovers. The probability of crossover and mutation is set as one strategy. Relevant patents have been probed in the topic.

  3. Multiscale Permutation Entropy Based Rolling Bearing Fault Diagnosis

    Directory of Open Access Journals (Sweden)

    Jinde Zheng

    2014-01-01

    Full Text Available A new rolling bearing fault diagnosis approach based on multiscale permutation entropy (MPE, Laplacian score (LS, and support vector machines (SVMs is proposed in this paper. Permutation entropy (PE was recently proposed and defined to measure the randomicity and detect dynamical changes of time series. However, for the complexity of mechanical systems, the randomicity and dynamic changes of the vibration signal will exist in different scales. Thus, the definition of MPE is introduced and employed to extract the nonlinear fault characteristics from the bearing vibration signal in different scales. Besides, the SVM is utilized to accomplish the fault feature classification to fulfill diagnostic procedure automatically. Meanwhile, in order to avoid a high dimension of features, the Laplacian score (LS is used to refine the feature vector by ranking the features according to their importance and correlations with the main fault information. Finally, the rolling bearing fault diagnosis method based on MPE, LS, and SVM is proposed and applied to the experimental data. The experimental data analysis results indicate that the proposed method could identify the fault categories effectively.

  4. Circular polarisation in AGN

    NARCIS (Netherlands)

    Macquart, JP

    2002-01-01

    We discuss the constraints that recent observations place on circular polarisation in AGN. In many sources the circular polarisation is variable on short timescales, indicating that it originates in compact regions of the sources. The best prospects for gleaning further information about circular po

  5. Minimal Degrees of Faithful Quasi-Permutation Representations for Direct Products of -Groups

    Indian Academy of Sciences (India)

    Ghodrat Ghaffarzadeh; Mohammad Hassan Abbaspour

    2012-08-01

    In [2], the algorithms of $c(G), q(G)$ and $p(G)$, the minimal degrees of faithful quasi-permutation and permutation representations of a finite group are given. The main purpose of this paper is to consider the relationship between these minimal degrees of non-trivial -groups and with the group × .

  6. Exact Permutation Algorithm for Paired Observations: The Challenge of R. A. Fisher

    Directory of Open Access Journals (Sweden)

    J. I. Odiase

    2007-01-01

    Full Text Available The major handicap of permutation test is the logical and computational requirement necessary to develop and implement the exact permutation scheme. This study provides an algorithm that systematically enumerates all the distinct permutations of the paired observations in an experiment without the possibility of repeating any of the permutations. The permutation algorithm presented completely breaks down the permutation problem for ease of implementation and analysis. The algorithm was illustratively implemented in Intel Visual Fortran to recreate Fisher’s manual compilation of 32,768 permutations of Charles Darwin’s data on heights of cross-fertilized and self-fertilized plants. The algorithm provides exact p-values for any experiment involving paired observations and exposes the danger in using asymptotic or parametric distributions such as the t-test to analyze small data sets when the exact functional form of the distribution is not explicitly known. This becomes more obvious especially when the experiment leads to a p-value close to the threshold level of significance. The exact distribution and the graphical presentation provided in this study give credence to the use of the permutation test.

  7. Students' Errors in Solving the Permutation and Combination Problems Based on Problem Solving Steps of Polya

    Science.gov (United States)

    Sukoriyanto; Nusantara, Toto; Subanji; Chandra, Tjang Daniel

    2016-01-01

    This article was written based on the results of a study evaluating students' errors in problem solving of permutation and combination in terms of problem solving steps according to Polya. Twenty-five students were asked to do four problems related to permutation and combination. The research results showed that the students still did a mistake in…

  8. An upper bound on the number of high-dimensional permutations

    CERN Document Server

    Linial, Nathan

    2011-01-01

    What is the higher-dimensional analog of a permutation? If we think of a permutation as given by a permutation matrix, then the following definition suggests itself: A d-dimensional permutation of order n is an [n]^(d+1) array of zeros and ones in which every "line" contains a unique 1 entry. A line here is a set of entries of the form {(x_1,...,x_{i-1},y,x_{i+1},...,x_{d+1})}, for y between 1 and n, some index i between 1 and d+1 and some choice of x_j in [n] for all j except i. It is easy to observe that a one-dimensional permutation is simply a permutation matrix and that a two-dimensional permutation is synonymous with an order-n Latin square. We seek an estimate for the number of d-dimensional permutations. Our main result is the following upper bound on their number: ((1+o(1))(n/e^d))^(n^d). We tend to believe that this is actually the correct number, but the problem of proving the complementary lower bound remains open. Our main tool is an adaptation of Bregman's proof of the Minc conjecture on permane...

  9. A highly nonlinear differentially 4 uniform power mapping that permutes fields of even degree

    DEFF Research Database (Denmark)

    Leander, Gregor; Bracken, Carl

    2010-01-01

    cryptosystem should be a permutation. Also, it is required that the function is highly nonlinear so that it is resistant to Matsui’s linear attack. In this article we demonstrate that the highly nonlinear permutation f (x) = x22k+2k+1 on the field F24k , discovered by Hans Dobbertin (1998) [1], has...

  10. Permuting operations on strings and the distribution of their prime numbers

    NARCIS (Netherlands)

    Asveld, Peter R.J.

    2011-01-01

    Several ways of interleaving, as studied in theoretical computer science, and some subjects from mathematics can be modeled by length-preserving operations on strings, that only permute the symbol positions in strings. Each such operation X gives rise to a family {Xn}n≥2} of similar permutations. We

  11. Equivalence Classes of Permutations under Various Relations Generated by Constrained Transpositions

    CERN Document Server

    Linton, Steven; Roby, Tom; West, Julian

    2011-01-01

    We consider a large family of equivalence relations on permutations in Sn that generalise those discovered by Knuth in his study of the Robinson-Schensted correspondence. In our most general setting, two permutations are equivalent if one can be obtained from the other by a sequence of pattern-replacing moves of prescribed form; however, we limit our focus to patterns where two elements are transposed, subject to the constraint that a third element of a suitable type be in a suitable position. For various instances of the problem, we compute the number of equivalence classes, determine how many n-permutations are equivalent to the identity permutation, or characterise this equivalence class. Although our results feature familiar integer sequences (e.g., Catalan, Fibonacci, and Tribonacci numbers) and special classes of permutations (layered, connected, and 123-avoiding), some of the sequences that arise appear to be new.

  12. A self-adaptive image encryption scheme with half-pixel interchange permutation operation

    Science.gov (United States)

    Ye, Ruisong; Liu, Li; Liao, Minyu; Li, Yafang; Liao, Zikang

    2017-01-01

    A plain-image dependent image encryption scheme with half-pixel-level swapping permutation strategy is proposed. In the new permutation operation, a pixel-swapping operation between four higher bit-planes and four lower bit-planes is employed to replace the traditional confusion operation, which not only improves the conventional permutation efficiency within the plain-image, but also changes all the pixel gray values. The control parameters of generalized Arnold map applied for the permutation operation are related to the plain-image content and consequently can resist chosen-plaintext and known-plaintext attacks effectively. To enhance the security of the proposed image encryption, one multimodal skew tent map is applied to generate pseudo-random gray value sequence for diffusion operation. Simulations have been carried out thoroughly to demonstrate that the proposed image encryption scheme is highly secure thanks to its large key space and efficient permutation-diffusion operations.

  13. Matrices with restricted entries and q-analogues of permutations

    CERN Document Server

    Lewis, Joel Brewster; Morales, Alejandro H; Panova, Greta; Sam, Steven V; Zhang, Yan

    2010-01-01

    We study the functions that count matrices of given rank over a finite field with specified positions equal to zero. We show that these matrices are $q$-analogues of permutations with certain restricted values. We obtain a simple closed formula for the number of invertible matrices with zero diagonal, a $q$-analogue of derangements, and a curious relationship between invertible skew-symmetric matrices and invertible symmetric matrices with zero diagonal. In addition, we provide recursions to enumerate matrices and symmetric matrices with zero diagonal by rank, and we frame some of our results in the context of Lie theory. Finally, we provide a brief exposition of polynomiality results for enumeration questions related to those mentioned, and give several open questions.

  14. Permutation Entropy Applied to Movement Behaviors of Drosophila Melanogaster

    Science.gov (United States)

    Liu, Yuedan; Chon, Tae-Soo; Baek, Hunki; Do, Younghae; Choi, Jin Hee; Chung, Yun Doo

    Movement of different strains in Drosophila melanogaster was continuously observed by using computer interfacing techniques and was analyzed by permutation entropy (PE) after exposure to toxic chemicals, toluene (0.1 mg/m3) and formaldehyde (0.01 mg/m3). The PE values based on one-dimensional time series position (vertical) data were variable according to internal constraint (i.e. strains) and accordingly increased in response to external constraint (i.e. chemicals) by reflecting diversity in movement patterns from both normal and intoxicated states. Cross-correlation function revealed temporal associations between the PE values and between the component movement patterns in different chemicals and strains through the period of intoxication. The entropy based on the order of position data could be a useful means for complexity measure in behavioral changes and for monitoring the impact of stressors in environment.

  15. All possible permutational symmetries of a quantum system

    Science.gov (United States)

    Arnaud, Ludovic

    2016-01-01

    We investigate the intermediate permutational symmetries of a system of qubits that lie in between the perfect symmetric and antisymmetric cases. We prove that, on average, pure states of qubits picked at random with respect to the uniform measure on the unit sphere of the Hilbert space are almost as antisymmetric as they are allowed to be. We then observe that multipartite entanglement, measured by the generalized Meyer-Wallach measure, tends to be larger in subspaces that are more antisymmetric than the complete symmetric one. Eventually, we prove that all states contained in the most antisymmetric subspace are relevant multipartite entangled states in the sense that their 1-qubit reduced states are all maximally mixed.

  16. A permutation test for the race model inequality

    DEFF Research Database (Denmark)

    Gondan, Matthias

    2010-01-01

    When participants are asked to respond in the same way to several stimulus identities, responses are often observed to be faster if two stimuli are presented simultaneously as opposed to when a single stimulus is presented (redundant signals effect; Miller, 1982). An important issue...... of such experiments is whether the observed redundancy gains can be explained by parallel processing of the two stimuli in a race-like fashion. To test the parallel processing model, Miller derived the well-known race model inequality which has become a routine test for behavioral data in experiments with redundant...... signals. Several statistical procedures have been used for testing the race model inequality. However, the commonly employed procedure does not control the Type I error. In this article a permutation test is described that keeps the Type I error at the desired level. Simulations show that the power...

  17. Ranking and Unranking of Hereditarily Finite Functions and Permutations

    CERN Document Server

    Tarau, Paul

    2008-01-01

    Prolog's ability to return multiple answers on backtracking provides an elegant mechanism to derive reversible encodings of combinatorial objects as Natural Numbers i.e. {\\em ranking} and {\\em unranking} functions. Starting from a generalization of Ackerman's encoding of Hereditarily Finite Sets with Urelements and a novel tupling/untupling operation, we derive encodings for Finite Functions and use them as building blocks for an executable theory of {\\em Hereditarily Finite Functions}. The more difficult problem of {\\em ranking} and {\\em unranking} {\\em Hereditarily Finite Permutations} is then tackled using Lehmer codes and factoradics. The paper is organized as a self-contained literate Prolog program available at \\url{http://logic.csci.unt.edu/tarau/research/2008/pHFF.zip}

  18. Permutation Centralizer Algebras and Multi-Matrix Invariants

    CERN Document Server

    Mattioli, Paolo

    2016-01-01

    We introduce a class of permutation centralizer algebras which underly the combinatorics of multi-matrix gauge invariant observables. One family of such non-commutative algebras is parametrised by two integers. Its Wedderburn-Artin decomposition explains the counting of restricted Schur operators, which were introduced in the physics literature to describe open strings attached to giant gravitons and were subsequently used to diagonalize the Gaussian inner product for gauge invariants of 2-matrix models. The structure of the algebra, notably its dimension, its centre and its maximally commuting sub-algebra, is related to Littlewood-Richardson numbers for composing Young diagrams. It gives a precise characterization of the minimal set of charges needed to distinguish arbitrary matrix gauge invariants, which are related to enhanced symmetries in gauge theory. The algebra also gives a star product for matrix invariants. The centre of the algebra allows efficient computation of a sector of multi-matrix correlator...

  19. Strong Trinucleotide Circular Codes

    Directory of Open Access Journals (Sweden)

    Christian J. Michel

    2011-01-01

    Full Text Available Recently, we identified a hierarchy relation between trinucleotide comma-free codes and trinucleotide circular codes (see our previous works. Here, we extend our hierarchy with two new classes of codes, called DLD and LDL codes, which are stronger than the comma-free codes. We also prove that no circular code with 20 trinucleotides is a DLD code and that a circular code with 20 trinucleotides is comma-free if and only if it is a LDL code. Finally, we point out the possible role of the symmetric group ∑4 in the mathematical study of trinucleotide circular codes.

  20. Publication of administrative circular

    CERN Multimedia

    HR Department

    2009-01-01

    ADMINISTRATIVE CIRCULAR NO. 23 (REV. 2) – SPECIAL WORKING HOURS Administrative Circular No. 23 (Rev. 2) entitled "Special working hours", approved following discussion in the Standing Concertation Committee on 9 December 2008, will be available on the intranet site of the Human Resources Department as from 19 December 2008: http://cern.ch/hr-docs/admincirc/admincirc.asp It cancels and replaces Administrative Circular No. 23 (Rev. 1) entitled "Stand-by duty" of April 1988. A "Frequently Asked Questions" information document on special working hours will also be available on this site. Paper copies of this circular will shortly be available in Departmental Secretariats. Human Resources Department Tel. 78003

  1. PUBLICATION OF ADMINISTRATIVE CIRCULAR

    CERN Multimedia

    HR Department

    2008-01-01

    ADMINISTRATIVE CIRCULAR NO. 23 (REV. 2) – SPECIAL WORKING HOURS Administrative Circular No. 23 (Rev. 2) entitled "Special working hours", approved following discussion in the Standing Concertation Committee meeting of 9 December 2008, will be available on the intranet site of the Human Resources Department as from 19 December 2008: http://cern.ch/hr-docs/admincirc/admincirc.asp It cancels and replaces Administrative Circular No. 23 (Rev. 1) entitled "Stand-by duty" of April 1988. A "Frequently Asked Questions" information document on special working hours will also be available on this site. Paper copies of this circular will shortly be available in departmental secretariats. Human Resources Department Tel. 78003

  2. A noncommutative de Finetti theorem: Invariance under quantum permutations is equivalent to freeness with amalgamation

    CERN Document Server

    Köstler, Claus

    2008-01-01

    We show that the classical de Finetti theorem has a canonical noncommutative counterpart if we strengthen `exchangeability' (i.e., invariance of the joint distribution of the random variables under the action of the permutation group) to invariance under the action of the quantum permutation group. More precisely, for an infinite sequence of noncommutative random variables, we prove that invariance of their joint distribution under quantum permutations is equivalent to the fact that the random variables are identically distributed and free with respect to the conditional expectation onto their tail algebra.

  3. Multi-response permutation procedure as an alternative to the analysis of variance: an SPSS implementation.

    Science.gov (United States)

    Cai, Li

    2006-02-01

    A permutation test typically requires fewer assumptions than does a comparable parametric counterpart. The multi-response permutation procedure (MRPP) is a class of multivariate permutation tests of group difference useful for the analysis of experimental data. However, psychologists seldom make use of the MRPP in data analysis, in part because the MRPP is not implemented in popular statistical packages that psychologists use. A set of SPSS macros implementing the MRPP test is provided in this article. The use of the macros is illustrated by analyzing example data sets.

  4. Predecessor and permutation existence problems for sequential dynamical systems

    Energy Technology Data Exchange (ETDEWEB)

    Barrett, C. L. (Christopher L.); Hunt, H. B. (Harry B.); Marathe, M. V. (Madhav V.); Rosenkrantz, D. J. (Daniel J.); Stearns, R. E. (Richard E.)

    2002-01-01

    A class of finite discrete dynamical systems, called Sequential Dynamical Systems (SDSs), was introduced in BMR99, BR991 as a formal model for analyzing simulation systems. An SDS S is a triple (G, F,n ),w here (i) G(V,E ) is an undirected graph with n nodes with each node having a state, (ii) F = (fi, fi, . . ., fn), with fi denoting a function associated with node ui E V and (iii) A is a permutation of (or total order on) the nodes in V, A configuration of an SDS is an n-vector ( b l, bz, . . ., bn), where bi is the value of the state of node vi. A single SDS transition from one configuration to another is obtained by updating the states of the nodes by evaluating the function associated with each of them in the order given by n. Here, we address the complexity of two basic problems and their generalizations for SDSs. Given an SDS S and a configuration C, the PREDECESSOR EXISTENCE (or PRE) problem is to determine whether there is a configuration C' such that S has a transition from C' to C. (If C has no predecessor, C is known as a garden of Eden configuration.) Our results provide separations between efficiently solvable and computationally intractable instances of the PRE problem. For example, we show that the PRE problem can be solved efficiently for SDSs with Boolean state values when the node functions are symmetric and the underlying graph is of bounded treewidth. In contrast, we show that allowing just one non-symmetric node function renders the problem NP-complete even when the underlying graph is a tree (which has a treewidth of 1). We also show that the PRE problem is efficiently solvable for SDSs whose state values are from a field and whose node functions are linear. Some of the polynomial algorithms also extend to the case where we want to find an ancestor configuration that precedes a given configuration by a logarithmic number of steps. Our results extend some of the earlier results by Sutner [Su95] and Green [@87] on the complexity of

  5. Circularity and Lambda Abstraction

    DEFF Research Database (Denmark)

    Danvy, Olivier; Thiemann, Peter; Zerny, Ian

    2013-01-01

    circular unknowns as dead variables, and we apply the functions to them. The result is a lazy circular program a la Bird. We illustrate the two transformations by mapping an algebraic construct to an isomorphic one with new leaves, reading a binary number as sug- gested by Knuth, and backpatching...

  6. Perfect Circular Dichroic Metamirrors

    CERN Document Server

    Wang, Zuojia; Liu, Yongmin

    2015-01-01

    In nature, the beetle Chrysina gloriosa derives its iridescence by selectively reflecting left-handed circularly polarized light only. Here, for the first time, we introduce and demonstrate the optical analogue based on an ultrathin metamaterial, which we term circular dichroic metamirror. A general method to design the circular dichroic metasmirror is presented under the framework of Jones calculus. It is analytically shown that the metamirror can be realized by two layers of anisotropic metamaterial structures, in order to satisfy the required simultaneous breakings of n-fold rotational (n>2) and mirror symmetries. We design an infrared metamirror, which shows perfect reflectance for left-handed circularly polarized light without reversing its handedness, while almost completely absorbs right-handed circularly polarized light. These findings offer new methodology to realize novel chiral optical devices for a variety of applications, including polarimetric imaging, molecular spectroscopy, as well as quantum ...

  7. Orders induced by segments in floorplan partitions and (2-14-3,3-41-2)-avoiding permutations

    CERN Document Server

    Asinowski, Andrei; Bousquet-Mélou, Mireille; Mansour, Toufik; Pinter, Ron

    2010-01-01

    Floorplan partitions are certain tilings of a rectangle by other rectangles. There are natural ways to order their elements (rectangles and segments). In particular, Ackerman, Barequet, and Pinter studied a pair of orders induced by neighborhood relations between rectangles of a floorplan partition, and obtained a natural bijection between these pairs and (2-41-3, 3-14-2)-avoiding permutations (also known as Baxter permutations). In the present paper, we study a pair of orders induced by neighborhood relations between segments of a floorplan partition. We obtain a natural bijection between these pairs and another family of permutations, namely (2-14-3,3-41-2)-avoiding permutations. We also enumerate these permutations, investigate relations between the two kinds of pairs of orders --- and correspondingly, between (2-14-3,3-41-2)-avoiding permutations and Baxter permutations --- and study the special case of "guillotine" partitions.

  8. Circularly symmetric light scattering from nanoplasmonic spirals.

    Science.gov (United States)

    Trevino, Jacob; Cao, Hui; Dal Negro, Luca

    2011-05-11

    In this paper, we combine experimental dark-field imaging, scattering, and fluorescence spectroscopy with rigorous electrodynamics calculations in order to investigate light scattering from planar arrays of Au nanoparticles arranged in aperiodic spirals with diffuse, circularly symmetric Fourier space. In particular, by studying the three main types of Vogel's spirals fabricated by electron-beam lithography on quartz substrates, we demonstrate polarization-insensitive planar light diffraction in the visible spectral range. Moreover, by combining dark-field imaging with analytical multiparticle calculations in the framework of the generalized Mie theory, we show that plasmonic spirals support distinctive structural resonances with circular symmetry carrying orbital angular momentum. The engineering of light scattering phenomena in deterministic structures with circular Fourier space provides a novel strategy for the realization of optical devices that fully leverage on enhanced, polarization-insensitive light-matter coupling over planar surfaces, such as thin-film plasmonic solar cells, plasmonic polarization devices, and optical biosensors.

  9. Single-Cycle Bit Permutations with MOMR Execution

    Institute of Scientific and Technical Information of China (English)

    Ruby B. Lee; Xiao Yang; Zhi-Jie Jerry Shi

    2005-01-01

    Secure computing paradigms impose new architectural challenges for general-purpose processors. Cryptographic processing is needed for secure communications, storage, and computations. We identify two categories of operations in symmetric-key and public-key cryptographic algorithms that are not common in previous general-purpose workloads:advanced bit operations within a word and multi-word operations. We define MOMR (Multiple Operands Multiple Results)execution or datarich execution as a unified solution to both challenges. It allows arbitrary n-bit permutations to be achieved in one or two cycles, rather than O(n) cycles as in existing RISC processors. It also enables significant acceleration of multiword multiplications needed by public-key ciphers. We propose two implementations of MOMR: one employs only hardware changes while the other uses Instruction Set Architecture (ISA) support. We show that MOMR execution leverages available resources in typical multi-issue processors with minimal additional cost. Multi-issue processors enhanced with MOMR units provide additional speedup over standard multi-issue processors with the same datapath. MOMR is a general architectural solution for word-oriented processor architectures to incorporate datarich operations.

  10. Ground states of fermionic lattice Hamiltonians with permutation symmetry

    Science.gov (United States)

    Kraus, Christina V.; Lewenstein, Maciej; Cirac, J. Ignacio

    2013-08-01

    We study the ground states of lattice Hamiltonians that are invariant under permutations, in the limit where the number of lattice sites N→∞. For spin systems, these are product states, a fact that follows directly from the quantum de Finetti theorem. For fermionic systems, however, the problem is very different, since mode operators acting on different sites do not commute, but anticommute. We construct a family of fermionic states, F, from which such ground states can be easily computed. They are characterized by few parameters whose number only depends on M, the number of modes per lattice site. We also give an explicit construction for M=1,2. In the first case, F is contained in the set of Gaussian states, whereas in the second it is not. Inspired by that construction, we build a set of fermionic variational wave functions, and apply it to the Fermi-Hubbard model in two spatial dimensions, obtaining results that go beyond the generalized Hartree-Fock theory.

  11. A MULTICRITERIA PERMUTATION FLOWSHOP SCHEDULING PROBLEM WITH SETUP TIMES

    Directory of Open Access Journals (Sweden)

    M.Saravanan

    2014-07-01

    Full Text Available The permutation flow shop scheduling problem has been completely concentrated on in late decades, both from single objective and additionally from multi-objective points of view. To the best of our information, little has been carried out with respect to the multi-objective flow shop with sequence dependent setup times are acknowledged. As setup times and multi-criteria problems are significant in industry, we must concentrate on this area. We propose a simple and powerful meta-heuristic algorithm as artificial immune system for the sequence dependent setup time’s flow shop problem with several criteria. The objective functions are framed to simultaneously minimize the makespan time, tardiness time, earliness time and total completion time. The proposed approach is in conjunction with the constructive heuristic of Nawaz et al. evaluated using benchmark problems taken from Taillard and compared with the prevailing Simulated annealing approach and B-Grasp approach. Computational experiments indicate that the proposed algorithm is better than the SA approach and B-Grasp approach in all cases and can be very well applied to find better schedule.

  12. Inferential permutation tests for maximum entropy models in ecology.

    Science.gov (United States)

    Shipley, Bill

    2010-09-01

    Maximum entropy (maxent) models assign probabilities to states that (1) agree with measured macroscopic constraints on attributes of the states and (2) are otherwise maximally uninformative and are thus as close as possible to a specified prior distribution. Such models have recently become popular in ecology, but classical inferential statistical tests require assumptions of independence during the allocation of entities to states that are rarely fulfilled in ecology. This paper describes a new permutation test for such maxent models that is appropriate for very general prior distributions and for cases in which many states have zero abundance and that can be used to test for conditional relevance of subsets of constraints. Simulations show that the test gives correct probability estimates under the null hypothesis. Power under the alternative hypothesis depends primarily on the number and strength of the constraints and on the number of states in the model; the number of empty states has only a small effect on power. The test is illustrated using two empirical data sets to test the community assembly model of B. Shipley, D. Vile, and E. Garnier and the species abundance distribution models of S. Pueyo, F. He, and T. Zillio.

  13. On the permutation combinatorics of worldsheet moduli space

    CERN Document Server

    Freidel, Laurent; Ramgoolam, Sanjaye

    2014-01-01

    Light-cone string diagrams have been used to reproduce the orbifold Euler characteristic of moduli spaces of punctured Riemann surfaces at low genus and with few punctures. Nakamura studied the meromorphic differential introduced by Giddings and Wolpert to characterise light-cone diagrams and introduced a class of graphs related to this differential. These Nakamura graphs were used to parametrise the cells in a light-cone cell decomposition of moduli space. We develop links between Nakamura graphs and realisations of the worldsheet as branched covers. This leads to a development of the combinatorics of Nakamura graphs in terms of permutation tuples. For certain classes of cells, including those of top dimension, there is a simple relation to Belyi maps, which allows us to use results from Hermitian and complex matrix models to give analytic formulae for the counting of cells at arbitrarily high genus. For the most general cells, we develop a new equivalence relation on Hurwitz classes which organises the cell...

  14. Classifications and canonical forms of tensor product expressions in the presence of permutation symmetries

    CERN Document Server

    Li, Zhendong; Liu, Wenjian

    2016-01-01

    Complicated mathematical equations involving tensors with permutation symmetries are frequently encountered in fields such as quantum chemistry, e.g., those in coupled cluster theories and derivatives of wavefunction parameters. In automatic derivations of these equations, a key step is the collection of product terms that can be found identical by using permutation symmetries or relabelling dummy indices. In the present work, we define a canonical form for a general tensor product in the presence of permutation symmetries as a result of the classification of all tensor products from a group theoretical point of view. To make such definition of practical use, we provide an efficient algorithm to compute the canonical form by combining the classical backtrack search for permutation groups and the idea of partitions used in graph isomorphism algorithms. The resulted algorithm can compute canonical forms and generators of the automorphism groups of tensor expressions. Moreover, for tensor products with external ...

  15. Digraph description of k-interchange technique for optimization over permutations and adaptive algorithm system

    CERN Document Server

    Levin, Mark Sh

    2011-01-01

    The paper describes a general glance to the use of element exchange techniques for optimization over permutations. A multi-level description of problems is proposed which is a fundamental to understand nature and complexity of optimization problems over permutations (e.g., ordering, scheduling, traveling salesman problem). The description is based on permutation neighborhoods of several kinds (e.g., by improvement of an objective function). Our proposed operational digraph and its kinds can be considered as a way to understand convexity and polynomial solvability for combinatorial optimization problems over permutations. Issues of an analysis of problems and a design of hierarchical heuristics are discussed. The discussion leads to a multi-level adaptive algorithm system which analyzes an individual problem and selects/designs a solving strategy (trajectory).

  16. A counterexample to Beck's conjecture on the discrepancy of three permutations

    CERN Document Server

    Newman, Alantha

    2011-01-01

    Given three permutations on the integers 1 through n, consider the set system consisting of each interval in each of the three permutations. Jozsef Beck conjectured (c. 1987) that the discrepancy of this set system is O(1). We give a counterexample to this conjecture: for any positive integer n = 3^k, we exhibit three permutations whose corresponding set system has discrepancy Omega(log(n)). Our counterexample is based on a simple recursive construction, and our proof of the discrepancy lower bound is by induction. This example also disproves a generalization of Beck's conjecture due to Spencer, Srinivasan and Tetali, who conjectured that a set system corresponding to l permutations has discrepancy O(sqrt(l)).

  17. Balancedness of Permutation Games and Envy-Free Allocations in Indivisible Good Economies

    NARCIS (Netherlands)

    Klijn, F.; Tijs, S.H.; Hamers, H.J.M.

    1999-01-01

    We present a simple proof of the balancedness of permutation games. In the proof we use the existence of envy-free allocations in economies with indivisible objects, quasi-linear utility functions, and an amount of money.

  18. Permutation Entropy and Its Main Biomedical and Econophysics Applications: A Review

    Directory of Open Access Journals (Sweden)

    Osvaldo A. Rosso

    2012-08-01

    Full Text Available Entropy is a powerful tool for the analysis of time series, as it allows describing the probability distributions of the possible state of a system, and therefore the information encoded in it. Nevertheless, important information may be codified also in the temporal dynamics, an aspect which is not usually taken into account. The idea of calculating entropy based on permutation patterns (that is, permutations defined by the order relations among values of a time series has received a lot of attention in the last years, especially for the understanding of complex and chaotic systems. Permutation entropy directly accounts for the temporal information contained in the time series; furthermore, it has the quality of simplicity, robustness and very low computational cost. To celebrate the tenth anniversary of the original work, here we analyze the theoretical foundations of the permutation entropy, as well as the main recent applications to the analysis of economical markets and to the understanding of biomedical systems.

  19. Circular-Arc Cartograms

    CERN Document Server

    Kämper, Jan-Hinrich; Nöllenburg, Martin

    2011-01-01

    We present a new circular-arc cartogram model in which countries are drawn with circular arcs instead of straight-line segments. Given a geographic map and values associated with each country in the map, the cartogram is a new map in which the areas of the countries represent the corresponding values. In the circular-arc cartogram model straight-line segments can be replaced with circular arcs in order to achieve the desired areas, while the corners of the polygons defining each country remain fixed. The countries in circular-arc cartograms have the aesthetically pleasing appearance of clouds or snowflakes, depending on whether their edges are bent outwards or inwards. This makes is easy to determine whether a country has grown or shrunk, just by its overall shape. We show that determining whether a given map and area-values can be realized with a circular-arc cartogram is an NP-hard problem. Next we describe a heuristic method for constructing circular-arc cartograms, which uses a max-flow computation on the...

  20. The genus distributions for a certain type of permutation graphs in orientable surfaces

    Institute of Scientific and Technical Information of China (English)

    Rong-xia; HAO; Wei-li; HE; Yan-pei; LIU; Er-ling; WEI

    2007-01-01

    A circuit is a connected nontrivial 2-regular graph. A graph G is a permutation graph over a circuit C, if G can be obtained from two copies of C by joining these two copies with a perfect matching. In this paper, based on the joint tree method introduced by Liu, the genus polynomials for a certain type of permutation graphs in orientable surfaces are given.

  1. Descent polynomials for k bubble-sortable permutations of type B

    CERN Document Server

    Hyatt, Matthew

    2012-01-01

    Motivated by the work of Chung, Claesson, Dukes, and Graham, we define a natural type B analog of the classic bubble sort, and use it to define a type B analog of the maximum drop statistic. We enumerate (by explicit, recursive, and generating function formulas) signed permutations with r type B descents and type B maximum drop at most k. We also find a connection between these signed permutations and certain 2-colored juggling sequences.

  2. THE PERMUTATION FORMULA OF SINGULAR INTEGRALS WITH BOCHNER-MARTINELLI KERNEL ON STEIN MANIFOLDS

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Using the method of localization, the authors obtain the permutation formula of singular integrals with Bochner-Martinelli kernel for a relative compact domain with C(1) smooth boundary on a Stein manifold. As an application the authors discuss the regularization problem for linear singular integral equations with Bochner-Martinelli kernel and variable coefficients; using permutation formula, the singular integral equation can be reduced to a fredholm equation.

  3. Building a Circular Future

    DEFF Research Database (Denmark)

    Merrild, Heidi; Guldager Jensen, Kasper; Sommer, John

    2016-01-01

    of the circular strategies is not only in the future. Increased flexibility, optimized operation and maintenance, as well as a healthier building, is low-hanging fruit that can be harvested today. The project’s principles can be implemented in industrialized construction in a large scale today. That is proven......Natural resources are scarce and construction accounts for 40 percent of the material and energy consumption in Europe. This means that a switch to a circular future is necessary. ’Building a Circular Future’ maps out where we are, where we are going, and what is needed for this conversion to take...

  4. Circular statistics in R

    CERN Document Server

    Pewsey, Arthur; Ruxton, Graeme D

    2013-01-01

    Circular Statistics in R provides the most comprehensive guide to the analysis of circular data in over a decade. Circular data arise in many scientific contexts whether it be angular directions such as: observed compass directions of departure of radio-collared migratory birds from a release point; bond angles measured in different molecules; wind directions at different times of year at a wind farm; direction of stress-fractures in concretebridge supports; longitudes of earthquake epicentres or seasonal and daily activity patterns, for example: data on the times of day at which animals are c

  5. Administrative & Operational Circulars - Reminder

    CERN Multimedia

    HR Department

    2011-01-01

    All Administrative and Operational Circulars are available on the intranet site of the Human Resources Department at the following address: http://cern.ch/hr-docs/admincirc/admincirc.asp Department Head Office  

  6. Circular words and applications

    Directory of Open Access Journals (Sweden)

    Benoît Rittaud

    2011-08-01

    Full Text Available We define the notion of circular words, then consider on such words a constraint derived from the Fibonacci condition. We give several results on the structure of these circular words, then mention possible applications to various situations: periodic expansion of numbers in numeration systems, "gcd-property" of integer sequences, partition of the prefix of the fixed point of the Fibonacci substitution, spanning trees of a wheel. Eventually, we mention some open questions.

  7. The Circular Camera Movement

    DEFF Research Database (Denmark)

    Hansen, Lennard Højbjerg

    2014-01-01

    It has been an accepted precept in film theory that specific stylistic features do not express specific content. Nevertheless, it is possible to find many examples in the history of film in which stylistic features do express specific content: for instance, the circular camera movement is used...... such as the circular camera movement. Keywords: embodied perception, embodied style, explicit narration, interpretation, style pattern, television style...

  8. Constructing parallel long-message signcryption scheme from trapdoor permutation

    Institute of Scientific and Technical Information of China (English)

    HU ZhenYu; LIN DongDai; WU WenLing; FENG DengGuo

    2007-01-01

    A highly practical parallel signcryption scheme named PLSC from trapdoor permutations (TDPs for short) was built to perform long messages directly. The new scheme follows the idea "scramble all, and encrypt small", using some scrambling operation on message m along with the user's identities, and then passing, in parallel, small parts of the scrambling result through corresponding TDPs. This design enables the scheme to flexibly perform long messages of arbitrary length while avoid repeatedly invoking TDP operations such as the CBC mode, or verbosely black-box composing symmetric encryption and signcryption, resulting in noticeable practical savings in both message bandwidth and efficiency. Concretely, the signcryption scheme requires exactly one computation of the "receiver's TDP" (for "encryption") and one inverse computation of the "sender's TDP" (for "authentication"), which is of great practical significance in directly performing long messages, since the major bottleneck for many public encryption schemes is the excessive computational overhead of performing TDP operations. Cutting out the verbosely repeated padding, the newly proposed scheme is more efficient than a black-box hybrid scheme. Most importantly, the proposed scheme has been proven to be tightly semantically secure under adaptive chosen ciphertext attacks (IND-CCA2) and to provide integrity of ciphertext (INT-CTXT) as well as non-repudiation in the random oracle model. All of these security guarantees are provided in the full multi-user, insider-security setting. Moreover, though the scheme is designed to perform long messages, it may also be appropriate for settings where it is impractical to perform large block of messages (i.e. extremely low memory environments such as smart cards).

  9. Particle Filter with State Permutations for Solving Image Jigsaw Puzzles

    Science.gov (United States)

    Yang, Xingwei; Adluru, Nagesh; Latecki, Longin Jan

    2016-01-01

    We deal with an image jigsaw puzzle problem, which is defined as reconstructing an image from a set of square and non-overlapping image patches. It is known that a general instance of this problem is NP-complete, and it is also challenging for humans, since in the considered setting the original image is not given. Recently a graphical model has been proposed to solve this and related problems. The target label probability function is then maximized using loopy belief propagation. We also formulate the problem as maximizing a label probability function and use exactly the same pairwise potentials. Our main contribution is a novel inference approach in the sampling framework of Particle Filter (PF). Usually in the PF framework it is assumed that the observations arrive sequentially, e.g., the observations are naturally ordered by their time stamps in the tracking scenario. Based on this assumption, the posterior density over the corresponding hidden states is estimated. In the jigsaw puzzle problem all observations (puzzle pieces) are given at once without any particular order. Therefore, we relax the assumption of having ordered observations and extend the PF framework to estimate the posterior density by exploring different orders of observations and selecting the most informative permutations of observations. This significantly broadens the scope of applications of the PF inference. Our experimental results demonstrate that the proposed inference framework significantly outperforms the loopy belief propagation in solving the image jigsaw puzzle problem. In particular, the extended PF inference triples the accuracy of the label assignment compared to that using loopy belief propagation.

  10. An Efficient Algorithm for the Split K-Layer Circular Topological Via Minimization Problem

    Directory of Open Access Journals (Sweden)

    J. S. Huang

    1996-01-01

    Full Text Available The split k-layer (k ≥ 2 circular topological via minimization (k-CTVM problem is reconsidered here. The problem is finding a topological routing of the n nets, using k available layers, such that the total number of vias is minimized. The optimal solution of this problem is solved in O(n2k+1 time. However, such an algorithm is inefficient even for n ≥ 8 and k ≥ 2. A heuristic algorithm with complexity of O(k n4 is presented. When the experimental results of this algorithm and that of an exhaustive algorithm are compared, the same number of optimal solutions is obtained from this heuristic algorithm for all permutations of 1 n = 8 with k = 2 or 3, and 2 n = 10 with k = 3. For other cases, the number of optimal solutions from this algorithm depends on the permutations been selected; and this number, in general, will increase as k increases.

  11. Walsh Spectral Characteristics and the Auto-Correlation Function Characteristics of Forming Orthomorphic Permutations of Multi-Output Functions

    Institute of Scientific and Technical Information of China (English)

    ZHAO Yaqun; WANG Jue

    2006-01-01

    Orthomorphic permutations have good characteristics in cryptosystems. In this paper, by using of knowledge about relation between orthomorphic permutations and multi-output functions, and conceptions of the generalized Walsh spectrum of multi-output functions and the auto-correlation function of multi-output functions to investigate the Walsh spectral characteristics and the auto-correlation function characteristics of orthormophic permutations, several results are obtained.

  12. Compact waveguide circular polarizer

    Science.gov (United States)

    Tantawi, Sami G.

    2016-08-16

    A multi-port waveguide is provided having a rectangular waveguide that includes a Y-shape structure with first top arm having a first rectangular waveguide port, a second top arm with second rectangular waveguide port, and a base arm with a third rectangular waveguide port for supporting a TE.sub.10 mode and a TE.sub.20 mode, where the end of the third rectangular waveguide port includes rounded edges that are parallel to a z-axis of the waveguide, a circular waveguide having a circular waveguide port for supporting a left hand and a right hand circular polarization TE.sub.11 mode and is coupled to a base arm broad wall, and a matching feature disposed on the base arm broad wall opposite of the circular waveguide for terminating the third rectangular waveguide port, where the first rectangular waveguide port, the second rectangular waveguide port and the circular waveguide port are capable of supporting 4-modes of operation.

  13. A Design of New Fast Image Permutation Approach for Food Intellectual-property Protection

    Directory of Open Access Journals (Sweden)

    Feng Huang

    2015-08-01

    Full Text Available The security of food image was important in food intellectual-property protection. Permutation could protect security of image which charged the correlation among adjacent pixels. Some chaotic maps were used in image permutation; act as baker map or some other maps. But the plain image must be square. At the same time the plain image always is stretched to a line firstly. Obviously, it wasted precious time. The study found the pixels location could arrange freely using some new maps without stretching and those also could encrypt rectangle images not only square image. The ideas of maps were: firstly the plain image was divided into two halves. Using two different scanning methods it could stretch the halves to two different lines. Then it inserted the pixels of a line into the adjacent pixels of another line in order. Lastly the new line could be fold to a new image. For different of scanning methods, it got some different map patterns. A permutation approach was developed which used those patterns. It used decimal numbers as the keys and could permute rectangle images easily. The permutation process was quite fast and enough safe. Deciphering process was an invertible process using the same keys. Some studies proved that high correlation among adjacent pixels was rapidly charged. The approach could satisfy the most security requirements in Internet.

  14. A novel chaos-based bit-level permutation scheme for digital image encryption

    Science.gov (United States)

    Fu, Chong; Lin, Bin-bin; Miao, Yu-sheng; Liu, Xiao; Chen, Jun-jie

    2011-11-01

    Confidentiality is an important issue when digital images are transmitted over public networks, and encryption is the most useful technique employed for this purpose. Image encryption is somehow different from text encryption due to some inherent features of image such as bulk data capacity and high correlation among pixels, which are generally difficult to handle by conventional algorithms. Recently, chaos-based encryption has suggested a new and efficient way to deal with the intractable problems of fast and highly secure image encryption. This paper proposes a novel chaos-based bit-level permutation scheme for secure and efficient image cipher. To overcome the drawbacks of conventional permutation-only type image cipher, the proposed scheme introduced a significant diffusion effect in permutation procedure through a two-stage bit-level shuffling algorithm. The two-stage permutation operations are realized by chaotic sequence sorting algorithm and Arnold Cat map, respectively. Results of various types of analysis are interesting and indicate that the security level of the new scheme is competitive with that of permutation-diffusion type image cipher, while the computational complexity is much lower. Therefore the new scheme is a good candidate for real-time secure image communication applications.

  15. Circular Fibonacci gratings.

    Science.gov (United States)

    Gao, Nan; Zhang, Yuchao; Xie, Changqing

    2011-11-01

    We introduce circular Fibonacci gratings (CFGs) that combine the concept of circular gratings and Fibonacci structures. Theoretical analysis shows that the diffraction pattern of CFGs is composed of fractal distributions of impulse rings. Numerical simulations are performed with two-dimensional fast Fourier transform to reveal the fractal behavior of the diffraction rings. Experimental results are also presented and agree well with the numerical results. The fractal nature of the diffraction field should be of great theoretical interest, and shows potential to be further developed into practical applications, such as in laser measurement with wideband illumination.

  16. Permutation invariant polynomial neural network approach to fitting potential energy surfaces. III. Molecule-surface interactions

    Science.gov (United States)

    Jiang, Bin; Guo, Hua

    2014-07-01

    The permutation invariant polynomial-neural network (PIP-NN) method for constructing highly accurate potential energy surfaces (PESs) for gas phase molecules is extended to molecule-surface interaction PESs. The symmetry adaptation in the NN fitting of a PES is achieved by employing as the input symmetry functions that fulfill both the translational symmetry of the surface and permutation symmetry of the molecule. These symmetry functions are low-order PIPs of the primitive symmetry functions containing the surface periodic symmetry. It is stressed that permutationally invariant cross terms are needed to avoid oversymmetrization. The accuracy and efficiency are demonstrated in fitting both a model PES for the H2 + Cu(111) system and density functional theory points for the H2 + Ag(111) system.

  17. Permutational distribution of the log-rank statistic under random censorship with applications to carcinogenicity assays.

    Science.gov (United States)

    Heimann, G; Neuhaus, G

    1998-03-01

    In the random censorship model, the log-rank test is often used for comparing a control group with different dose groups. If the number of tumors is small, so-called exact methods are often applied for computing critical values from a permutational distribution. Two of these exact methods are discussed and shown to be incorrect. The correct permutational distribution is derived and studied with respect to its behavior under unequal censoring in the light of recent results proving that the permutational version and the unconditional version of the log-rank test are asymptotically equivalent even under unequal censoring. The log-rank test is studied by simulations of a realistic scenario from a bioassay with small numbers of tumors.

  18. A Noncommutative de Finetti Theorem: Invariance under Quantum Permutations is Equivalent to Freeness with Amalgamation

    Science.gov (United States)

    Köstler, Claus; Speicher, Roland

    2009-10-01

    We show that the classical de Finetti theorem has a canonical noncommutative counterpart if we strengthen “exchangeability” (i.e., invariance of the joint distribution of the random variables under the action of the permutation group) to invariance under the action of the quantum permutation group. More precisely, for an infinite sequence of noncommutative random variables {(x_i)_{iinmathbb{N}}} , we prove that invariance of the joint distribution of the x i ’s under quantum permutations is equivalent to the fact that the x i ’s are identically distributed and free with respect to the conditional expectation onto the tail algebra of the x i ’s.

  19. Numerical and experimental study of the effects of noise on the permutation entropy

    CERN Document Server

    Quintero-Quiroz, C; Torrent, M C; Masoller, Cristina

    2015-01-01

    We analyze the effects of noise on the permutation entropy of dynamical systems. We take as numerical examples the logistic map and the R\\"ossler system. Upon varying the noise strengthfaster, we find a transition from an almost-deterministic regime, where the permutation entropy grows slower than linearly with the pattern dimension, to a noise-dominated regime, where the permutation entropy grows faster than linearly with the pattern dimension. We perform the same analysis on experimental time-series by considering the stochastic spiking output of a semiconductor laser with optical feedback. Because of the experimental conditions, the dynamics is found to be always in the noise-dominated regime. Nevertheless, the analysis allows to detect regularities of the underlying dynamics. By comparing the results of these three different examples, we discuss the possibility of determining from a time series whether the underlying dynamics is dominated by noise or not.

  20. Exponential Brute-Force Complexity of A Permutation Based Stream Cipher

    Directory of Open Access Journals (Sweden)

    Mohammed Omari

    2013-01-01

    Full Text Available This paper introduces a permutation generation mechanism based on a shared secret key. The generated permutation vectors are used as encryption keys in a stream ciphering cryptosystem. We investigated various types of attacks on the known stream cipher RC4 and patched most of its loopholes, especially biased-byte and state-related attacks. Unique to our approach, we prove mathematically that the complexity of brute-forcing such a system is (2n, where n is the key size in bytes. This paper also presents a complete security model using permutation-based encryption, in order to handle privacy. In addition, our approach achieved higher performance than that of existing peer techniques, while maintaining solid security. Experimental results show that our system is much faster than the existing security mechanisms, such as AES and DES.

  1. Six-qubit permutation-based decoherence-free orthogonal basis

    CERN Document Server

    Cabello, A

    2007-01-01

    There is a natural orthogonal basis of the 6-qubit decoherence-free (DF) space robust against collective noise. Interestingly, most of the basis states can be obtained from one another just permuting qubits. This property: (a) is useful for encoding qubits in DF subspaces, (b) allows the implementation of the Bennett-Brassard 1984 (BB84) protocol in DF subspaces just permuting qubits, which completes a the method for quantum key distribution using DF states proposed by Boileau et al. [Phys. Rev. Lett. 92, 017901 (2004)], and (c) points out that there is only one 6-qubit DF state which is essentially new (not obtained by permutations) and therefore constitutes an interesting experimental challenge.

  2. Around the circular law

    CERN Document Server

    Bordenave, Charles

    2011-01-01

    These expository notes are centered around the circular law theorem, which states that the empirical spectral distribution of a n \\times n random matrix with i.i.d. entries of variance 1/n tends to the uniform law on the unit disc of the complex plane as the dimension n tends to infinity. This phenomenon is the non-Hermitian counterpart of the semi circular limit for Wigner random Hermitian matrices, and the quarter circular limit for Marchenko-Pastur random covariance matrices. We present a proof in a Gaussian case, due to Silverstein, based on a formula by Ginibre, and a proof of the universal case by revisiting the approach of Tao and Vu, based on the Hermitization of Girko, the logarithmic potential, and the control of the small singular values. Beyond the finite variance model, we also consider the case where the entries have heavy tails, by using the objective method of Aldous and Steele borrowed from randomized combinatorial optimization. The limiting law is then no longer the circular law and is relat...

  3. Radical Circular Economy

    NARCIS (Netherlands)

    Prins, M.; Mohammadi, S.; Slob, N.

    2015-01-01

    Recently the Circular Economy (CE) concept has gained momentum in the Netherlands, propounding that environmental impact reduction can provide a significant positive economical impulse. The government, larger parts of the industry as a whole, as well as the construction industry, has warmly received

  4. Wiimote Experiments: Circular Motion

    Science.gov (United States)

    Kouh, Minjoon; Holz, Danielle; Kawam, Alae; Lamont, Mary

    2013-01-01

    The advent of new sensor technologies can provide new ways of exploring fundamental physics. In this paper, we show how a Wiimote, which is a handheld remote controller for the Nintendo Wii video game system with an accelerometer, can be used to study the dynamics of circular motion with a very simple setup such as an old record player or a…

  5. Transposable elements and circular DNAs

    KAUST Repository

    Mourier, Tobias

    2016-09-26

    Circular DNAs are extra-chromosomal fragments that become circularized by genomic recombination events. We have recently shown that yeast LTR elements generate circular DNAs through recombination events between their flanking long terminal repeats (LTRs). Similarly, circular DNAs can be generated by recombination between LTRs residing at different genomic loci, in which case the circular DNA will contain the intervening sequence. In yeast, this can result in gene copy number variations when circles contain genes and origins of replication. Here, I speculate on the potential and implications of circular DNAs generated through recombination between human transposable elements.

  6. Structured LDPC Codes from Permutation Matrices Free of Small Trapping Sets

    CERN Document Server

    Nguyen, Dung Viet; Marcellin, Michael; Chilappagari, Shashi Kiran

    2010-01-01

    This paper introduces a class of structured lowdensity parity-check (LDPC) codes whose parity check matrices are arrays of permutation matrices. The permutation matrices are obtained from Latin squares and form a finite field under some matrix operations. They are chosen so that the Tanner graphs do not contain subgraphs harmful to iterative decoding algorithms. The construction of column-weight-three codes is presented. Although the codes are optimized for the Gallager A/B algorithm over the binary symmetric channel (BSC), their error performance is very good on the additive white Gaussian noise channel (AWGNC) as well.

  7. Bearing Fault Diagnosis Based on Multiscale Permutation Entropy and Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Jian-Jiun Ding

    2012-07-01

    Full Text Available Bearing fault diagnosis has attracted significant attention over the past few decades. It consists of two major parts: vibration signal feature extraction and condition classification for the extracted features. In this paper, multiscale permutation entropy (MPE was introduced for feature extraction from faulty bearing vibration signals. After extracting feature vectors by MPE, the support vector machine (SVM was applied to automate the fault diagnosis procedure. Simulation results demonstrated that the proposed method is a very powerful algorithm for bearing fault diagnosis and has much better performance than the methods based on single scale permutation entropy (PE and multiscale entropy (MSE.

  8. SOME CODES WHICH ARE INVARIENT UNDER A DOUBLY-TRANSITIVE PERMUTATION GROUP AND THEIR CONNECTION WITH BALANCED INCOMPLETE BLOCK DESIGNS

    Science.gov (United States)

    If a binary code is invariant under a doubly-transitive permutation group, then the set of all code words of weight j forms a balanced incomplete...doubly- transitive permutation group. Thus, BIB designs can be derived from these classes of codes. It is shown that if the symbols of the Reed-Muller

  9. Kappa Coefficients for Circular Classifications

    NARCIS (Netherlands)

    Warrens, Matthijs J.; Pratiwi, Bunga C.

    2016-01-01

    Circular classifications are classification scales with categories that exhibit a certain periodicity. Since linear scales have endpoints, the standard weighted kappas used for linear scales are not appropriate for analyzing agreement between two circular classifications. A family of kappa coefficie

  10. A Symmetric Chaos-Based Image Cipher with an Improved Bit-Level Permutation Strategy

    Directory of Open Access Journals (Sweden)

    Chong Fu

    2014-02-01

    Full Text Available Very recently, several chaos-based image ciphers using a bit-level permutation have been suggested and shown promising results. Due to the diffusion effect introduced in the permutation stage, the workload of the time-consuming diffusion stage is reduced, and hence the performance of the cryptosystem is improved. In this paper, a symmetric chaos-based image cipher with a 3D cat map-based spatial bit-level permutation strategy is proposed. Compared with those recently proposed bit-level permutation methods, the diffusion effect of the new method is superior as the bits are shuffled among different bit-planes rather than within the same bit-plane. Moreover, the diffusion key stream extracted from hyperchaotic system is related to both the secret key and the plain image, which enhances the security against known/chosen plaintext attack. Extensive security analysis has been performed on the proposed scheme, including the most important ones like key space analysis, key sensitivity analysis, plaintext sensitivity analysis and various statistical analyses, which has demonstrated the satisfactory security of the proposed scheme

  11. On the reconstruction of binary and permutation matrices under (binary) tomographic constraints

    NARCIS (Netherlands)

    Brunetti, S.; Del Lungo, A.; Gritzmann, P.; de Vries, S.

    2008-01-01

    The paper studies the problem of reconstructing binary matrices constrained by binary tomographic information. We prove new NP-hardness results that sharpen previous complexity results in the realm of discrete tomography but also allow applications to related problems for permutation matrices. Hence

  12. Analyzing Permutations for AES-like Ciphers: Understanding ShiftRows

    DEFF Research Database (Denmark)

    Beierle, Christof; Jovanovic, Philipp; Lauridsen, Martin Mehl;

    2015-01-01

    Designing block ciphers and hash functions in a manner that resemble the AES in many aspects has been very popular since Rijndael was adopted as the Advanced Encryption Standard. However, in sharp contrast to the MixColumns operation, the security implications of the way the state is permuted by ...

  13. The coupling analysis between stock market indices based on permutation measures

    Science.gov (United States)

    Shi, Wenbin; Shang, Pengjian; Xia, Jianan; Yeh, Chien-Hung

    2016-04-01

    Many information-theoretic methods have been proposed for analyzing the coupling dependence between time series. And it is significant to quantify the correlation relationship between financial sequences since the financial market is a complex evolved dynamic system. Recently, we developed a new permutation-based entropy, called cross-permutation entropy (CPE), to detect the coupling structures between two synchronous time series. In this paper, we extend the CPE method to weighted cross-permutation entropy (WCPE), to address some of CPE's limitations, mainly its inability to differentiate between distinct patterns of a certain motif and the sensitivity of patterns close to the noise floor. It shows more stable and reliable results than CPE does when applied it to spiky data and AR(1) processes. Besides, we adapt the CPE method to infer the complexity of short-length time series by freely changing the time delay, and test it with Gaussian random series and random walks. The modified method shows the advantages in reducing deviations of entropy estimation compared with the conventional one. Finally, the weighted cross-permutation entropy of eight important stock indices from the world financial markets is investigated, and some useful and interesting empirical results are obtained.

  14. EPEPT: A web service for enhanced P-value estimation in permutation tests

    Directory of Open Access Journals (Sweden)

    Knijnenburg Theo A

    2011-10-01

    Full Text Available Abstract Background In computational biology, permutation tests have become a widely used tool to assess the statistical significance of an event under investigation. However, the common way of computing the P-value, which expresses the statistical significance, requires a very large number of permutations when small (and thus interesting P-values are to be accurately estimated. This is computationally expensive and often infeasible. Recently, we proposed an alternative estimator, which requires far fewer permutations compared to the standard empirical approach while still reliably estimating small P-values 1. Results The proposed P-value estimator has been enriched with additional functionalities and is made available to the general community through a public website and web service, called EPEPT. This means that the EPEPT routines can be accessed not only via a website, but also programmatically using any programming language that can interact with the web. Examples of web service clients in multiple programming languages can be downloaded. Additionally, EPEPT accepts data of various common experiment types used in computational biology. For these experiment types EPEPT first computes the permutation values and then performs the P-value estimation. Finally, the source code of EPEPT can be downloaded. Conclusions Different types of users, such as biologists, bioinformaticians and software engineers, can use the method in an appropriate and simple way. Availability http://informatics.systemsbiology.net/EPEPT/

  15. Differential cryptanalysis of round-reduced PRINTcipher: Computing roots of permutations

    DEFF Research Database (Denmark)

    Abdelraheem, Mohamed Ahmed; Leander, Gregor; Zenner, Erik

    2011-01-01

    At CHES 2010, the new block cipher PRINTcipher was presented. In addition to using an xor round key as is common practice for round-based block ciphers, PRINTcipher also uses key-dependent permutations. While this seems to make differential cryptanalysis difficult due to the unknown bit permutati...

  16. Permutations with Kazhdan-Lusztig polynomial P_{id,w}(q) = 1 + q^h

    OpenAIRE

    Woo, Alexander; Billey, Sara; Weed, Jonathan

    2008-01-01

    Using resolutions of singularities introduced by Cortez and a method for calculating Kazhdan-Lusztig polynomials due to Polo, we prove the conjecture of Billey and Braden characterizing permutations w with Kazhdan-Lusztig polynomial P_{id,w}(q)=1+q^h for some h.

  17. A Secure and Efficient Image Encryption Scheme Based on Tent Map and Permutation-substitution Architecture

    Directory of Open Access Journals (Sweden)

    Ruisong Ye

    2014-03-01

    Full Text Available A secure image encryption scheme based on 2D skew tent map is proposed for the encryption of color images. The proposed encryption scheme is composed of one permutation process and one substitution process. The 3D color plain-image matrix is converted to 2D image matrix first, then 2D skew tent map is utilized to generate chaotic sequences, which are used for both permutation process and substitution process. The chaotic sequence for permutation process is dependent on plain-image and cipher keys, resulting in good key sensitivity and plaintext sensitivity. The substitution process is first initiated with the initial vectors generated by the cipher keys and 2D skew tent map, then the gray values of row and column pixels of 2D image matrix are mixed with the pseudorandom number sequences via bitxoring operation. Both permutation process and substitution process are executed row-by-row and column-by-column instead of pixel-by-pixel to improve the speed of encryption. The security and performance of the proposed image encryption have been analyzed, including histograms, correlation coefficients, information entropy, key sensitivity analysis, key space analysis, differential analysis, encryption/decryption rate analysis etc. All the experimental results suggest that the proposed image encryption scheme is robust and secure and can be used for secure image and video communication applications.

  18. Permutation test for non-inferiority of the linear to the optimal combination of multiple tests.

    Science.gov (United States)

    Jin, Hua; Lu, Ying

    2009-03-01

    We proposed a permutation test for non-inferiority of the linear discriminant function to the optimal combination of multiple tests based on Mann-Whitney statistic estimate of the area under the receiver operating characteristic curve. Monte Carlo simulations showed its good performance.

  19. Circular arc structures

    KAUST Repository

    Bo, Pengbo

    2011-07-01

    The most important guiding principle in computational methods for freeform architecture is the balance between cost efficiency on the one hand, and adherence to the design intent on the other. Key issues are the simplicity of supporting and connecting elements as well as repetition of costly parts. This paper proposes so-called circular arc structures as a means to faithfully realize freeform designs without giving up smooth appearance. In contrast to non-smooth meshes with straight edges where geometric complexity is concentrated in the nodes, we stay with smooth surfaces and rather distribute complexity in a uniform way by allowing edges in the shape of circular arcs. We are able to achieve the simplest possible shape of nodes without interfering with known panel optimization algorithms. We study remarkable special cases of circular arc structures which possess simple supporting elements or repetitive edges, we present the first global approximation method for principal patches, and we show an extension to volumetric structures for truly threedimensional designs. © 2011 ACM.

  20. Antennas on circular cylinders

    DEFF Research Database (Denmark)

    Knudsen, H. L.

    1959-01-01

    antenna in a circular cylinder. By a procedure similar to the one used by Silver and Saunders, expressions have been derived for the field radiated from an arbitrary surface current distribution on a cylinder surface coaxial with a perfectly conducting cylinder. The cases where the space between the two...... cylindrical surfaces have the sane characteristic constants and different constants are treated separately. Extensive numerical computations of the field radiated from the slot antennas described here are being carried out, but no numerical results are yet available...

  1. Circularly polarized antennas

    CERN Document Server

    Gao, Steven; Zhu, Fuguo

    2013-01-01

    This book presents a comprehensive insight into the design techniques for different types of CP antenna elements and arrays In this book, the authors address a broad range of topics on circularly polarized (CP) antennas. Firstly, it introduces to the reader basic principles, design techniques and characteristics of various types of CP antennas, such as CP patch antennas, CP helix antennas, quadrifilar helix antennas (QHA), printed quadrifilar helix antennas (PQHA), spiral antenna, CP slot antennas, CP dielectric resonator antennas, loop antennas, crossed dipoles, monopoles and CP horns. Adva

  2. A Comparison of Multiscale Permutation Entropy Measures in On-Line Depth of Anesthesia Monitoring

    Science.gov (United States)

    Li, Xiaoli; Li, Duan; Li, Yongwang; Ursino, Mauro

    2016-01-01

    Objective Multiscale permutation entropy (MSPE) is becoming an interesting tool to explore neurophysiological mechanisms in recent years. In this study, six MSPE measures were proposed for on-line depth of anesthesia (DoA) monitoring to quantify the anesthetic effect on the real-time EEG recordings. The performance of these measures in describing the transient characters of simulated neural populations and clinical anesthesia EEG were evaluated and compared. Methods Six MSPE algorithms—derived from Shannon permutation entropy (SPE), Renyi permutation entropy (RPE) and Tsallis permutation entropy (TPE) combined with the decomposition procedures of coarse-graining (CG) method and moving average (MA) analysis—were studied. A thalamo-cortical neural mass model (TCNMM) was used to generate noise-free EEG under anesthesia to quantitatively assess the robustness of each MSPE measure against noise. Then, the clinical anesthesia EEG recordings from 20 patients were analyzed with these measures. To validate their effectiveness, the ability of six measures were compared in terms of tracking the dynamical changes in EEG data and the performance in state discrimination. The Pearson correlation coefficient (R) was used to assess the relationship among MSPE measures. Results CG-based MSPEs failed in on-line DoA monitoring at multiscale analysis. In on-line EEG analysis, the MA-based MSPE measures at 5 decomposed scales could track the transient changes of EEG recordings and statistically distinguish the awake state, unconsciousness and recovery of consciousness (RoC) state significantly. Compared to single-scale SPE and RPE, MSPEs had better anti-noise ability and MA-RPE at scale 5 performed best in this aspect. MA-TPE outperformed other measures with faster tracking speed of the loss of unconsciousness. Conclusions MA-based multiscale permutation entropies have the potential for on-line anesthesia EEG analysis with its simple computation and sensitivity to drug effect

  3. Fine-grained permutation entropy as a measure of natural complexity for time series

    Institute of Scientific and Technical Information of China (English)

    Liu Xiao-Feng; Wang Yue

    2009-01-01

    In a recent paper [2002 Phys. Rev. Lett. 88 174102], Bandt and Pompe propose permutation entropy (PE)as a natural complexity measure for arbitrary time series which may be stationary or nonstationary, deterministic or stochastic. Their method is based on a comparison of neighbouring values. This paper further develops PE, and proposes the concept of fine-grained PE (FGPE) defined by the order pattern and magnitude of the difference between neighbouring values. This measure excludes the case where vectors with a distinct appearance are mistakenly mapped onto the same permutation type, and consequently FGPE becomes more sensitive to the dynamical change of time series than does PE, according to our simulation and experimental results.

  4. Novel algorithm for complex bit reversal: employing vector permutation and branch reduction methods

    Institute of Scientific and Technical Information of China (English)

    Feng YU; Ze-ke WANG; Rui-feng GE

    2009-01-01

    We present novel vector permutation and branch reduction methods to minimize the number of execution cycles for bit reversal algorithms. The new methods are applied to single instruction multiple data (SIMD) parallel implementation of complex data floating-point fast Fourier transform (FFT). The number of operational clock cycles can be reduced by an average factor of 3.5 by using our vector permutation methods and by 1.1 by using our branch reduction methods, compared with conventional implementations. Experiments on MPC7448 (a well-known SIMD reduced instruction set computing processor) demonstrate that our optimal bit-reversal algorithm consistently takes fewer than two cycles per element in complex array operations.

  5. Accidental permutation symmetries as a test for Grand Unification: the supersymmetric $SU(5)$ case

    CERN Document Server

    Fichet, Sylvain

    2016-01-01

    Unification of matter fields implies the existence of accidental permutation symmetries, which potentially remain immune to large quantum corrections up to the TeV scale. We investigate the case of a supersymmetric $SU(5)$ grand unified theory, where such a permutation symmetry is present in the up-type squark sector. We present a variety of tests allowing to challenge the $SU(5)$ hypothesis based on the observation of squarks at the LHC. These tests appear as relations among observables involving flavour-violating or chirality-flipping decays of squarks. Moreover, they rely on top-polarimetry and charm-tagging. As an example, we discuss the application to the scenario of Natural Supersymmetry, while more examples can be found in the related journal publications.

  6. Weighted fractional permutation entropy and fractional sample entropy for nonlinear Potts financial dynamics

    Science.gov (United States)

    Xu, Kaixuan; Wang, Jun

    2017-02-01

    In this paper, recently introduced permutation entropy and sample entropy are further developed to the fractional cases, weighted fractional permutation entropy (WFPE) and fractional sample entropy (FSE). The fractional order generalization of information entropy is utilized in the above two complexity approaches, to detect the statistical characteristics of fractional order information in complex systems. The effectiveness analysis of proposed methods on the synthetic data and the real-world data reveals that tuning the fractional order allows a high sensitivity and more accurate characterization to the signal evolution, which is useful in describing the dynamics of complex systems. Moreover, the numerical research on nonlinear complexity behaviors is compared between the returns series of Potts financial model and the actual stock markets. And the empirical results confirm the feasibility of the proposed model.

  7. Permutation Entropy and Statistical Complexity Analysis of Turbulence in Laboratory Plasmas and the Solar Wind

    CERN Document Server

    Weck, Peter J; Brown, Michael R; Wicks, Robert T

    2014-01-01

    The Bandt-Pompe permutation entropy and the Jensen-Shannon statistical complexity are used to analyze fluctuating time series of three different plasmas: the magnetohydrodynamic (MHD) turbulence in the plasma wind tunnel of the Swarthmore Spheromak Experiment (SSX), drift-wave turbulence of ion saturation current fluctuations in the edge of the Large Plasma Device (LAPD) and fully-developed turbulent magnetic fluctuations of the solar wind taken from the WIND spacecraft. The entropy and complexity values are presented as coordinates on the CH plane for comparison among the different plasma environments and other fluctuation models. The solar wind is found to have the highest permutation entropy and lowest statistical complexity of the three data sets analyzed. Both laboratory data sets have larger values of statistical complexity, suggesting these systems have fewer degrees of freedom in their fluctuations, with SSX magnetic fluctuations having slightly less complexity than the LAPD edge fluctuations. The CH ...

  8. Rolling Bearing Fault Diagnosis Based on ELCD Permutation Entropy and RVM

    Directory of Open Access Journals (Sweden)

    Jiang Xingmeng

    2016-01-01

    Full Text Available Aiming at the nonstationary characteristic of a gear fault vibration signal, a recognition method based on permutation entropy of ensemble local characteristic-scale decomposition (ELCD and relevance vector machine (RVM is proposed. First, the vibration signal was decomposed by ELCD; then a series of intrinsic scale components (ISCs were obtained. Second, according to the kurtosis of ISCs, principal ISCs were selected and then the permutation entropy of principal ISCs was calculated and they were combined into a feature vector. Finally, the feature vectors were input in RVM classifier to train and test and identify the type of rolling bearing faults. Experimental results show that this method can effectively diagnose four kinds of working condition, and the effect is better than local characteristic-scale decomposition (LCD method.

  9. Multivariate Multi-Scale Permutation Entropy for Complexity Analysis of Alzheimer’s Disease EEG

    Directory of Open Access Journals (Sweden)

    Isabella Palamara

    2012-07-01

    Full Text Available An original multivariate multi-scale methodology for assessing the complexity of physiological signals is proposed. The technique is able to incorporate the simultaneous analysis of multi-channel data as a unique block within a multi-scale framework. The basic complexity measure is done by using Permutation Entropy, a methodology for time series processing based on ordinal analysis. Permutation Entropy is conceptually simple, structurally robust to noise and artifacts, computationally very fast, which is relevant for designing portable diagnostics. Since time series derived from biological systems show structures on multiple spatial-temporal scales, the proposed technique can be useful for other types of biomedical signal analysis. In this work, the possibility of distinguish among the brain states related to Alzheimer’s disease patients and Mild Cognitive Impaired subjects from normal healthy elderly is checked on a real, although quite limited, experimental database.

  10. A note on the estimation of the Pareto efficient set for multiobjective matrix permutation problems.

    Science.gov (United States)

    Brusco, Michael J; Steinley, Douglas

    2012-02-01

    There are a number of important problems in quantitative psychology that require the identification of a permutation of the n rows and columns of an n × n proximity matrix. These problems encompass applications such as unidimensional scaling, paired-comparison ranking, and anti-Robinson forms. The importance of simultaneously incorporating multiple objective criteria in matrix permutation applications is well recognized in the literature; however, to date, there has been a reliance on weighted-sum approaches that transform the multiobjective problem into a single-objective optimization problem. Although exact solutions to these single-objective problems produce supported Pareto efficient solutions to the multiobjective problem, many interesting unsupported Pareto efficient solutions may be missed. We illustrate the limitation of the weighted-sum approach with an example from the psychological literature and devise an effective heuristic algorithm for estimating both the supported and unsupported solutions of the Pareto efficient set.

  11. A Novel Permutation Based Approach for Effective and Efficient Representation of Face Images under Varying Illuminations

    Directory of Open Access Journals (Sweden)

    S Natarajan

    2013-08-01

    Full Text Available Paramount importance for an automated face recognition system is the ability to enhance discriminatory power with a low-dimensional feature representation. Keeping this as a focal point, we present a novel approach for face recognition by formulating the problem of face tagging in terms of permutation. Using a fundamental concept that, dominant pixels of a person will remain dominant under varying illuminations, we develop a Permutation Matrix (PM based approach for representing face images. The proposed method is extensively evaluated on several benchmark databases under different exemplary evaluation protocols reported in the literature. Experimental results and comparative study with state-of-the-art methods suggest that the proposed approach provides a better representation of face, thereby achieving higher efficacy and lower error rates.

  12. Fundamental Group and Euler Characteristic of Permutation Products and Fat Diagonals

    CERN Document Server

    Kallel, Sadok

    2010-01-01

    Permutation products and their various "fat diagonal" subspaces are studied from the topological and geometric point of view. We first write down an expression for the fundamental group of any permutation product of a connected space $X$, having the homotopy type of a simplicial complex, in terms of $\\pi_1(X)$ and $H_1(X;{\\mathbb Z})$. We then prove that the fundamental group of the configuration space of $n$-points on $X$ of which multiplicities do not exceed $n/2$ coincides with $H_1(X;{\\mathbb Z})$. Useful additivity properties for the Euler characteristic are then spelled out and used to give explicit formulae for the Euler characteristics of various fat diagonals. Several examples and calculations are included.

  13. Data Hiding by LSB Substitution Using Genetic Optimal Key-Permutation

    Directory of Open Access Journals (Sweden)

    Marghny Mohamed

    2011-01-01

    Full Text Available The least significant bit (LSB embedding method is one of the most commonly used techniques; it targets the LSB'sof the host image to hide the data. This paper deals with three main steganography challenges (i.e. capacity, imperceptibility,and security. This is achieved by hybrid data hiding scheme incorporates LSB technique with a key-permutation method. Thepaper also proposes an optimal key permutation method using genetic algorithms for best key selection. Both normal andoptimized methods are tested with standard images, varying both data size as well as key space. Final experimental resultsshow decrement in computation time when increasing number of keys, at the same time system security improves.

  14. A permutation information theory tour through different interest rate maturities: the Libor case.

    Science.gov (United States)

    Bariviera, Aurelio Fernández; Guercio, María Belén; Martinez, Lisana B; Rosso, Osvaldo A

    2015-12-13

    This paper analyses Libor interest rates for seven different maturities and referred to operations in British pounds, euros, Swiss francs and Japanese yen, during the period 2001-2015. The analysis is performed by means of two quantifiers derived from information theory: the permutation Shannon entropy and the permutation Fisher information measure. An anomalous behaviour in the Libor is detected in all currencies except euros during the years 2006-2012. The stochastic switch is more severe in one, two and three months maturities. Given the special mechanism of Libor setting, we conjecture that the behaviour could have been produced by the manipulation that was uncovered by financial authorities. We argue that our methodology is pertinent as a market overseeing instrument.

  15. Break the Ties for NEH Heuristic in Solving the Permutation Flow Shop Problems

    Institute of Scientific and Technical Information of China (English)

    GAO Shou-wei; LEISTEN Rainer; DAI Yang; ZHANG Wei-dong

    2008-01-01

    This study deals with the Permutation Flow Shop Scheduling Problem (PFSP) based on the maximum completion time (makespan). NEH (the algorithm of Nawaz, Enscore and Ham) is the concluded most efficient constructive method in solving this NP-hard problem. The principal features of its strengths are the initial arrangement of jobs and the job insertion phase. In some instances, ties will occur in both the initial permutation and the partial sequences. The problem of ties breaking may have a significant impact on the NEH performance, but evaluate all the ties will be non-polynomial in the worst case. Several kinds of methods are presented in the paper to break the ties in a quick time. Together with the basic one, all 22 methods are tested on the famous Taillard's benchmarks and the most suitable ties breaking policy is recommended.

  16. X-s-Permutable Subgroups%X-s-置换子群

    Institute of Scientific and Technical Information of China (English)

    石磊; 郭文彬; 易小兰

    2008-01-01

    Let X be a nonempty subset of a group G.A subgroup H of G is said to be X-spermutable in G if,for every Sylow subgroup T of G,there exists an element x ∈X such that HTx=Tx H.In this paper,we obtain some results about the X-s-permutable subgroups and use them to determine the structure of some finite groups.

  17. Permutation Excess Entropy and Mutual Information between the Past and Future

    CERN Document Server

    Haruna, Taichi

    2011-01-01

    We address the excess entropy, which is a measure of complexity for stationary time series, from the ordinal point of view. We show that the permutation excess entropy is equal to the mutual information between two adjacent semi-infinite blocks in the space of orderings for finite-state stationary ergodic Markov processes. This result may shed a new light on the relationship between complexity and anticipation.

  18. Computationally efficient permutation-based confidence interval estimation for tail-area FDR

    Directory of Open Access Journals (Sweden)

    Joshua eMillstein

    2013-09-01

    Full Text Available Challenges of satisfying parametric assumptions in genomic settings with thousands or millions of tests have led investigators to combine powerful False Discovery Rate (FDR approaches with computationally expensive but exact permutation testing. We describe a computationally efficient permutation-based approach that includes a tractable estimator of the proportion of true null hypotheses, the variance of the log of tail-area FDR, and a confidence interval (CI estimator, which accounts for the number of permutations conducted and dependencies between tests. The CI estimator applies a binomial distribution and an overdispersion parameter to counts of positive tests. The approach is general with regards to the distribution of the test statistic, it performs favorably in comparison to other approaches, and reliable FDR estimates are demonstrated with as few as 10 permutations. An application of this approach to relate sleep patterns to gene expression patterns in mouse hypothalamus yielded a set of 11 transcripts associated with 24 hour REM sleep (FDR = .15 (.08, .26. Two of the corresponding genes, Sfrp1 and Sfrp4, are involved in wnt signaling and several others, Irf7, Ifit1, Iigp2, and Ifih1, have links to interferon signaling. These genes would have been overlooked had a typical a priori FDR threshold such as 0.05 or 0.1 been applied. The CI provides the flexibility for choosing a significance threshold based on tolerance for false discoveries and precision of the FDR estimate. That is, it frees the investigator to use a more data-driven approach to define significance, such as the minimum estimated FDR, an option that is especially useful for weak effects, often observed in studies of complex diseases.

  19. Operational circular No. 1 (Rev. 1) – Operational circulars

    CERN Multimedia

    HR Department

    2011-01-01

    Operational Circular No. 1 (Rev. 1) is applicable to members of the personnel and other persons concerned. Operational Circular No. 1 (Rev. 1) entitled "Operational circulars", approved following discussion at the Standing Concertation Committee meeting on 4 May 2011, is available on the intranet site of the Human Resources Department: https://hr-docs.web.cern.ch/hr-docs/opcirc/opcirc.asp It cancels and replaces Operational Circular No. 1 entitled "Operational Circulars” of December 1996. This new version clarifies, in particular, that operational circulars do not necessarily arise from the Staff Rules and Regulations, and the functional titles have been updated to bring them into line with the current CERN organigram. Department Head Office  

  20. Circularly Polarized MHOHG with Bichromatic Circularly Polarized Laser Pulses

    Science.gov (United States)

    Bandrauk, Andre D.; Mauger, Francois; Uzer, Turgay

    2016-05-01

    Circularly polarized MHOHG-Molecular High Order Harmonic Generation is shown to occur efficiently with intense ultrashort bichromatic circularly polarized pulses due to frequent electron-parent -ion recollision with co-or counter-rotating incident circular pulses as predicted in 1995. We show in this context that molecules offer a very robust and efficient frameworkfor the production of circularly polarized harmonics for the generation of single circularly polarized ``attosecond'' pulses. The efficiency of such new MHOHG is shown to depend on the compatibility of the symmetry of the molecular medium with the net electric field generated by the combination of the laser pulses.Using a time-dependent symmetry analysis with concrete examples such as H 2 + vs H 3 + we show how all the features(harmonic order and ∧ polarization) of MHOHG can be explained and predicted.

  1. On wind Turbine failure detection from measurements of phase currents: a permutation entropy approach

    CERN Document Server

    Ram, Sumit Kumar; Molinas, Marta

    2016-01-01

    This article presents the applicability of Permutation Entropy based complexity measure of a time series for detection of fault in wind turbines. A set of electrical data from one faulty and one healthy wind turbine were analysed using traditional FastFourier analysis in addition to Permutation Entropy analysis to compare the complexity index of phase currents of the two turbines over time. The 4 seconds length data set did not reveal any low frequency in the spectra of currents, neither did they show any meaningful differences of spectrum between the two turbine currents. Permutation Entropy analysis of the current waveforms of same phases for the two turbines are found to have different complexity values over time, one of them being clearly higher than the other. The work of Yan et. al. in has found that higher entropy values related to thepresence of failure in rotary machines in his study. Following this track, further efforts will be put into relating the entropy difference found in our study to possible...

  2. Differentiating Interictal and Ictal States in Childhood Absence Epilepsy through Permutation Rényi Entropy

    Directory of Open Access Journals (Sweden)

    Nadia Mammone

    2015-07-01

    Full Text Available Permutation entropy (PE has been widely exploited to measure the complexity of the electroencephalogram (EEG, especially when complexity is linked to diagnostic information embedded in the EEG. Recently, the authors proposed a spatial-temporal analysis of the EEG recordings of absence epilepsy patients based on PE. The goal here is to improve the ability of PE in discriminating interictal states from ictal states in absence seizure EEG. For this purpose, a parametrical definition of permutation entropy is introduced here in the field of epileptic EEG analysis: the permutation Rényi entropy (PEr. PEr has been extensively tested against PE by tuning the involved parameters (order, delay time and alpha. The achieved results demonstrate that PEr outperforms PE, as there is a statistically-significant, wider gap between the PEr levels during the interictal states and PEr levels observed in the ictal states compared to PE. PEr also outperformed PE as the input to a classifier aimed at discriminating interictal from ictal states.

  3. Permutation entropy and statistical complexity analysis of turbulence in laboratory plasmas and the solar wind.

    Science.gov (United States)

    Weck, P J; Schaffner, D A; Brown, M R; Wicks, R T

    2015-02-01

    The Bandt-Pompe permutation entropy and the Jensen-Shannon statistical complexity are used to analyze fluctuating time series of three different turbulent plasmas: the magnetohydrodynamic (MHD) turbulence in the plasma wind tunnel of the Swarthmore Spheromak Experiment (SSX), drift-wave turbulence of ion saturation current fluctuations in the edge of the Large Plasma Device (LAPD), and fully developed turbulent magnetic fluctuations of the solar wind taken from the Wind spacecraft. The entropy and complexity values are presented as coordinates on the CH plane for comparison among the different plasma environments and other fluctuation models. The solar wind is found to have the highest permutation entropy and lowest statistical complexity of the three data sets analyzed. Both laboratory data sets have larger values of statistical complexity, suggesting that these systems have fewer degrees of freedom in their fluctuations, with SSX magnetic fluctuations having slightly less complexity than the LAPD edge I(sat). The CH plane coordinates are compared to the shape and distribution of a spectral decomposition of the wave forms. These results suggest that fully developed turbulence (solar wind) occupies the lower-right region of the CH plane, and that other plasma systems considered to be turbulent have less permutation entropy and more statistical complexity. This paper presents use of this statistical analysis tool on solar wind plasma, as well as on an MHD turbulent experimental plasma.

  4. Termination of Rewriting with Right-Flat Rules Modulo Permutative Theories

    CERN Document Server

    Barguñó, Luis; Huntingford, Eduard; Tiwari, Ashish

    2010-01-01

    We present decidability results for termination of classes of term rewriting systems modulo permutative theories. Termination and innermost termination modulo permutative theories are shown to be decidable for term rewrite systems (TRS) whose right-hand side terms are restricted to be shallow (variables occur at depth at most one) and linear (each variable occurs at most once). Innermost termination modulo permutative theories is also shown to be decidable for shallow TRS. We first show that a shallow TRS can be transformed into a flat (only variables and constants occur at depth one) TRS while preserving termination and innermost termination. The decidability results are then proved by showing that (a) for right-flat right-linear (flat) TRS, non-termination (respectively, innermost non-termination) implies non-termination starting from flat terms, and (b) for right-flat TRS, the existence of non-terminating derivations starting from a given term is decidable. On the negative side, we show PSPACE-hardness of ...

  5. Revisiting the European sovereign bonds with a permutation-information-theory approach

    Science.gov (United States)

    Fernández Bariviera, Aurelio; Zunino, Luciano; Guercio, María Belén; Martinez, Lisana B.; Rosso, Osvaldo A.

    2013-12-01

    In this paper we study the evolution of the informational efficiency in its weak form for seventeen European sovereign bonds time series. We aim to assess the impact of two specific economic situations in the hypothetical random behavior of these time series: the establishment of a common currency and a wide and deep financial crisis. In order to evaluate the informational efficiency we use permutation quantifiers derived from information theory. Specifically, time series are ranked according to two metrics that measure the intrinsic structure of their correlations: permutation entropy and permutation statistical complexity. These measures provide the rectangular coordinates of the complexity-entropy causality plane; the planar location of the time series in this representation space reveals the degree of informational efficiency. According to our results, the currency union contributed to homogenize the stochastic characteristics of the time series and produced synchronization in the random behavior of them. Additionally, the 2008 financial crisis uncovered differences within the apparently homogeneous European sovereign markets and revealed country-specific characteristics that were partially hidden during the monetary union heyday.

  6. Hippocampal activation during face-name associative memory encoding: blocked versus permuted design

    Energy Technology Data Exchange (ETDEWEB)

    De Vogelaere, Frederick; Vingerhoets, Guy [Ghent University, Laboratory for Neuropsychology, Department of Neurology, Ghent (Belgium); Santens, Patrick; Boon, Paul [Ghent University Hospital, Department of Neurology, Ghent (Belgium); Achten, Erik [Ghent University Hospital, Department of Radiology, Ghent (Belgium)

    2010-01-15

    The contribution of the hippocampal subregions to episodic memory through the formation of new associations between previously unrelated items such as faces and names is established but remains under discussion. Block design studies in this area of research generally tend to show posterior hippocampal activation during encoding of novel associational material while event-related studies emphasize anterior hippocampal involvement. We used functional magnetic resonance imaging to assess the involvement of anterior and posterior hippocampus in the encoding of novel associational material compared to the viewing of previously seen associational material. We used two different experimental designs, a block design and a permuted block design, and applied it to the same associative memory task to perform valid statistical comparisons. Our results indicate that the permuted design was able to capture more anterior hippocampal activation compared to the block design, which emphasized more posterior hippocampal involvement. These differences were further investigated and attributed to a combination of the polymodal stimuli we used and the experimental design. Activation patterns during encoding in both designs occurred along the entire longitudinal axis of the hippocampus, but with different centers of gravity. The maximal activated voxel in the block design was situated in the posterior half of the hippocampus while in the permuted design this was located in the anterior half. (orig.)

  7. Circular chemiresistors for microchemical sensors

    Science.gov (United States)

    Ho, Clifford K.

    2007-03-13

    A circular chemiresistor for use in microchemical sensors. A pair of electrodes is fabricated on an electrically insulating substrate. The pattern of electrodes is arranged in a circle-filling geometry, such as a concentric, dual-track spiral design, or a circular interdigitated design. A drop of a chemically sensitive polymer (i.e., chemiresistive ink) is deposited on the insulating substrate on the electrodes, which spreads out into a thin, circular disk contacting the pair of electrodes. This circularly-shaped electrode geometry maximizes the contact area between the pair of electrodes and the polymer deposit, which provides a lower and more stable baseline resistance than with linear-trace designs. The circularly-shaped electrode pattern also serves to minimize batch-to-batch variations in the baseline resistance due to non-uniform distributions of conductive particles in the chemiresistive polymer film.

  8. Towards Future Circular Colliders

    CERN Document Server

    AUTHOR|(CDS)2108454; Zimmermann, Frank

    2016-01-01

    The Large Hadron Collider (LHC) at CERN presently provides proton-proton collisions at a centre-of-mass (c.m.) energy of 13 TeV. The LHC design was started more than 30 years ago, and its physics programme will extend through the second half of the 2030’s. The global Future Circular Collider (FCC) study is now preparing for a post-LHC project. The FCC study focuses on the design of a 100-TeV hadron collider (FCC-hh) in a new ∼100 km tunnel. It also includes the design of a high-luminosity electron-positron collider (FCC-ee) as a potential intermediate step, and a lepton-hadron collider option (FCC-he). The scope of the FCC study comprises accelerators, technology, infrastructure, detectors, physics, concepts for worldwide data services, international governance models, and implementation scenarios. Among the FCC core technologies figure 16-T dipole magnets, based on $Nb_3Sn$ superconductor, for the FCC-hh hadron collider, and a highly efficient superconducting radiofrequency system for the FCC-ee lepton c...

  9. Future Circular Colliders

    CERN Document Server

    AUTHOR|(CDS)2108454; Zimmermann, Frank

    2015-01-01

    In response to a request from the 2013 Update of the European Strategy for Particle Physics, the global Future Circular Collider (FCC) study is preparing the foundation for a next-generation large-scale accelerator infrastructure in the heart of Europe. The FCC study focuses on the design of a 100-TeV hadron collider (FCC-hh), to be accommodated in a new ∼100 km tunnel near Geneva. It also includes the design of a high-luminosity electron-positron collider (FCC-ee), which could be installed in the same tunnel as a potential intermediate step, and a lepton-hadron collider option (FCC-he). The scope of the FCC study comprises accelerators, technology, infrastructure, detectors, physics, concepts for worldwide data services, international governance models, and implementation scenarios. Among the FCC core technologies figure 16-T dipole magnets, based on Nb3Sn superconductor, for the FCC-hh hadron collider, and a highly efficient superconducting radiofrequency system for the FCC-ee lepton collider. The interna...

  10. Future Circular Colliders

    CERN Document Server

    AUTHOR|(CDS)2108454; Zimmermann, Frank

    2015-01-01

    In response to a request from the 2013 Update of the European Strategy for Particle Physics, the global Future Circular Collider (FCC) study is preparing the foundation for a next-generation large-scale accelerator infrastructure in the heart of Europe. The FCC study focuses on the design of a 100-TeV hadron collider (FCC-hh), to be accommodated in a new ∼100 km tunnel near Geneva. It also includes the design of a high-luminosity electron-positron collider (FCC-ee), which could be installed in the same tunnel as a potential intermediate step, and a lepton-hadron collider option (FCC-he). The scope of the FCC study comprises accelerators, technology, infrastructure, detector, physics, concepts for worldwide data services, international governance models, and implementation scenarios. Among the FCC core technologies figure 16-T dipole magnets, based on Nb3Sn superconductor, for the FCC-hh hadron collider, and a highly efficient superconducting radiofrequency system for the FCC-ee lepton collider. The internat...

  11. Reload Purified Melittin and Lactoferrin on Perfluorooctyl Bromide Nanoparticles (PFOB-Nps and Examine the Distribution of Particle Size, Zeta Potential and Confirmation of Their Accession on the Nanoparticles Via Tryptophan Fluorescence and Circular Dichroism (CD and its Anti-Cancer Effects on Human Breast Cancer Cell Line MCF7

    Directory of Open Access Journals (Sweden)

    Hadis Rahmani Incheh Keykanlu

    2016-12-01

    Full Text Available Acording to the prevalence of cancer in today's societies, it is too important to find new drugs for that treatment. Cationic antimicrobial peptides that are able to eliminate a wide range of bacteria, fungi, parasites, viruses and unicellular, are natural anti-cancer agents. In the present study, the effect of cationic peptides of bee venom Melittin (ML and Lactoferrin (LF of camel milk which was loaded on the Perfluorooctyl Bromide (PFOB nanoparticles, were examined on MCF7 cells. Nanoparticles using oil in water emulsion was prepared by ultra-thoracic and ultrasonic. Then ML and LF were separately added to the nanoparticles then incorporation of them were confirmed by tryptophan fluorescence and circular dichroism (CD spectra. The mean diameter of the nanoparticles did not change after addition of ML and LF (~100 nm, but as expected, the zeta potential of the nanoparticles with increasing of ML and LF concentrations to the preformed nanoparticles increased from -18.43(without ML and LF to +21.61(LF 110.66µg/ml and +20.93(ML 0.1µg/ml and +23.75(LF 110.66µg/ml and ML 0.1µg/ml. By using of scanning electron microscopy (SEM, the morphology and structure of nanoparticles was investigated, homogeneity and uniformity during processing and loading of ML and LF was observed. Effectiveness of nanoparticles loaded on cancer cells was performed with MTT test. The results showed that ML and LF had a positive effect on cancer cell death. Percent of cell death was higher when ML and LF was loaded on nanoparticles. With increase of ML and LF concentration loading on nanoparticles, increases cancer cell death. Minitab software was used to analyze some data.

  12. Digitalizing the Circular Economy

    Science.gov (United States)

    Reuter, Markus A.

    2016-12-01

    Metallurgy is a key enabler of a circular economy (CE), its digitalization is the metallurgical Internet of Things (m-IoT). In short: Metallurgy is at the heart of a CE, as metals all have strong intrinsic recycling potentials. Process metallurgy, as a key enabler for a CE, will help much to deliver its goals. The first-principles models of process engineering help quantify the resource efficiency (RE) of the CE system, connecting all stakeholders via digitalization. This provides well-argued and first-principles environmental information to empower a tax paying consumer society, policy, legislators, and environmentalists. It provides the details of capital expenditure and operational expenditure estimates. Through this path, the opportunities and limits of a CE, recycling, and its technology can be estimated. The true boundaries of sustainability can be determined in addition to the techno-economic evaluation of RE. The integration of metallurgical reactor technology and systems digitally, not only on one site but linking different sites globally via hardware, is the basis for describing CE systems as dynamic feedback control loops, i.e., the m-IoT. It is the linkage of the global carrier metallurgical processing system infrastructure that maximizes the recovery of all minor and technology elements in its associated refining metallurgical infrastructure. This will be illustrated through the following: (1) System optimization models for multimetal metallurgical processing. These map large-scale m-IoT systems linked to computer-aided design tools of the original equipment manufacturers and then establish a recycling index through the quantification of RE. (2) Reactor optimization and industrial system solutions to realize the "CE (within a) Corporation—CEC," realizing the CE of society. (3) Real-time measurement of ore and scrap properties in intelligent plant structures, linked to the modeling, simulation, and optimization of industrial extractive process

  13. Towards future circular colliders

    Science.gov (United States)

    Benedikt, Michael; Zimmermann, Frank

    2016-09-01

    The Large Hadron Collider (LHC) at the European Organization for Nuclear Research (CERN) presently provides proton-proton collisions at a center-of-mass (c.m.) energy of 13 TeV. The LHC design was started more than 30 years ago, and its physics program will extend through the second half of the 2030's. The global Future Circular Collider (FCC) study is now preparing for a post-LHC project. The FCC study focuses on the design of a 100-TeV hadron collider (FCC-hh) in a new ˜100 km tunnel. It also includes the design of a high-luminosity electron-positron collider (FCCee) as a potential intermediate step, and a lepton-hadron collider option (FCC-he). The scope of the FCC study comprises accelerators, technology, infrastructure, detectors, physics, concepts for worldwide data services, international governance models, and implementation scenarios. Among the FCC core technologies figure 16-T dipole magnets, based on Nb3 S n superconductor, for the FCC-hh hadron collider, and a highly-efficient superconducting radiofrequency system for the FCC-ee lepton collider. Following the FCC concept, the Institute of High Energy Physics (IHEP) in Beijing has initiated a parallel design study for an e + e - Higgs factory in China (CEPC), which is to be succeeded by a high-energy hadron collider (SPPC). At present a tunnel circumference of 54 km and a hadron collider c.m. energy of about 70 TeV are being considered. After a brief look at the LHC, this article reports the motivation and the present status of the FCC study, some of the primary design challenges and R&D subjects, as well as the emerging global collaboration.

  14. Fluorescence spectroscopy

    DEFF Research Database (Denmark)

    Bagatolli, Luis

    2016-01-01

    Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses the foundati......Fluorescence spectroscopy is a powerful experimental tool used by scientists from many disciplines. During the last decades there have been important developments on distinct fluorescence methods, particularly those related to the study of biological phenomena. This chapter discusses...

  15. Adaptive Tests of Significance Using Permutations of Residuals with R and SAS

    CERN Document Server

    O'Gorman, Thomas W

    2012-01-01

    Provides the tools needed to successfully perform adaptive tests across a broad range of datasets Adaptive Tests of Significance Using Permutations of Residuals with R and SAS illustrates the power of adaptive tests and showcases their ability to adjust the testing method to suit a particular set of data. The book utilizes state-of-the-art software to demonstrate the practicality and benefits for data analysis in various fields of study. Beginning with an introduction, the book moves on to explore the underlying concepts of adaptive tests, including:Smoothing methods and normalizing transforma

  16. Impact of Energetically Accessible Proton Permutations in the Spectroscopy and Dynamics of H{_5^+}

    Science.gov (United States)

    Lin, Zhou; McCoy, Anne B.

    2016-06-01

    H{_5^+} has been proposed to be the intermediate of the astrochemically interesting proton transfer reaction H_3^+ + H_2 → H_2 + H_3^+. The scrambling of five protons in this floppy, ``structureless'' ion introduces complications to its high-resolution rovibrational spectroscopy and the proton transfer dynamics between H{_3^+} and H_2. Quantum chemical studies are performed to predict and interpret the spectroscopic and dynamical properties of H{_5^+}, with special consideration paid to the group theoretical aspects. If the full permutation of protons were allowed in H{_5^+}, just like in CH{_5^+}, the system should have been characterized by the G240 complete permutation-inversion group. However, our diffusion Monte Carlo calculations indicate that such a full permutation is not allowed for most of the molecular configurations sampled by the reaction path of the proton transfer process in question, and the energetically accessible permutations are functions of the distance between the H{_3^+} and H_2 fragments. In the present study, we investigate two extreme geometries of H{_5^+}, the [H_2-H-H_2]^+ shared-proton intermediate and the H_3^+\\cdots H_2 long-range complex, using two subgroups of G240, G16 and G24, respectively. In these two limiting circumstances, we derive the symmetry-adapted basis functions for the energy levels that describe the nuclear spins and the rovibrational motions of H{_5^+}. Based on the results of these derivations, we discuss the spectroscopic properties of H{_5^+}, including the coupling between different rovibrational degrees of freedom in the effective nuclear motion Hamiltonian, the electric-dipole selection rules for rovibrational spectroscopy, and correlations of energy levels between [H_2-H-H_2]^+ and H_3^+\\cdots H_2. Our study can be considered as the first step towards the implementation of future quantitative theoretical investigations for comparison with spectroscopic and dynamical experiments. X.-G. Wang and T

  17. Permutation approach, high frequency trading and variety of micro patterns in financial time series

    Science.gov (United States)

    Aghamohammadi, Cina; Ebrahimian, Mehran; Tahmooresi, Hamed

    2014-11-01

    Permutation approach is suggested as a method to investigate financial time series in micro scales. The method is used to see how high frequency trading in recent years has affected the micro patterns which may be seen in financial time series. Tick to tick exchange rates are considered as examples. It is seen that variety of patterns evolve through time; and that the scale over which the target markets have no dominant patterns, have decreased steadily over time with the emergence of higher frequency trading.

  18. Multistage Off-Line Permutation Packet Routing on a Mesh: An Approach with Elementary Mathematics

    Institute of Scientific and Technical Information of China (English)

    Kevin Chiew; Yingjiu Li

    2009-01-01

    Various methods have been proposed for off-line permutation packet routing on a mesh. One of the methods is known as multistage routing, in which the first stage is crucial. For the first stage of routing, the previous study normally converts it to a problem of graph theory and proves the existence of solutions. However, there is a lack of simple algorithms to the first stage of routing. This article presents an explicit and simple approach for the first stage of routing based on elementary mathematics.

  19. The Influence of s-Conditional Permutability of Subgroups on the Structure of Finite Groups

    Institute of Scientific and Technical Information of China (English)

    Wen Juan NIU; Wen Bin GU; Yu Feng LIU

    2011-01-01

    Let G be a finite group.Fix a prime divisor p of |G|and a Sylow p-subgroup P of G, let d be the smallest generator number of P and Md(P) denote a family of maximal subgroups P1, P2,…,Pd of P satisfying ∩idPi=Φ(P), the Frattini subgroup of P.In this paper, we shall investigate the influence of s-conditional permutability of the members of some fixed Md(P) on the structure of finite groups.Some new results are obtained and some known results are generalized.

  20. A NEW ROUTING ALGORITHM FOR THE SHUFFLE-EXCHANGE PERMUTATION NETWORK

    Institute of Scientific and Technical Information of China (English)

    Baoxing CHEN; Wenjun XIAO; Ni DU

    2006-01-01

    In this paper, a new routing algorithm is given for the shuffle-exchange permutation network (SEPn). The length of the path between any two nodes given by our algorithm is not more than 11/16n2 +O(n), i.e., the diameter of SEPn is at most 11/16n2+O(n). This improves on a 1/8(9n2 -22n+24)routing algorithm described earlier by S. Latifi and P. K. Srimani. We also show that the diameter of SEPn is more than 1/2n2-n.

  1. A Flexible Computational Framework Using R and Map-Reduce for Permutation Tests of Massive Genetic Analysis of Complex Traits.

    Science.gov (United States)

    Mahjani, Behrang; Toor, Salman; Nettelblad, Carl; Holmgren, Sverker

    2017-01-01

    In quantitative trait locus (QTL) mapping significance of putative QTL is often determined using permutation testing. The computational needs to calculate the significance level are immense, 10(4) up to 10(8) or even more permutations can be needed. We have previously introduced the PruneDIRECT algorithm for multiple QTL scan with epistatic interactions. This algorithm has specific strengths for permutation testing. Here, we present a flexible, parallel computing framework for identifying multiple interacting QTL using the PruneDIRECT algorithm which uses the map-reduce model as implemented in Hadoop. The framework is implemented in R, a widely used software tool among geneticists. This enables users to rearrange algorithmic steps to adapt genetic models, search algorithms, and parallelization steps to their needs in a flexible way. Our work underlines the maturity of accessing distributed parallel computing for computationally demanding bioinformatics applications through building workflows within existing scientific environments. We investigate the PruneDIRECT algorithm, comparing its performance to exhaustive search and DIRECT algorithm using our framework on a public cloud resource. We find that PruneDIRECT is vastly superior for permutation testing, and perform 2 ×10(5) permutations for a 2D QTL problem in 15 hours, using 100 cloud processes. We show that our framework scales out almost linearly for a 3D QTL search.

  2. Automatic event detection in low SNR microseismic signals based on multi-scale permutation entropy and a support vector machine

    Science.gov (United States)

    Jia, Rui-Sheng; Sun, Hong-Mei; Peng, Yan-Jun; Liang, Yong-Quan; Lu, Xin-Ming

    2016-12-01

    Microseismic monitoring is an effective means for providing early warning of rock or coal dynamical disasters, and its first step is microseismic event detection, although low SNR microseismic signals often cannot effectively be detected by routine methods. To solve this problem, this paper presents permutation entropy and a support vector machine to detect low SNR microseismic events. First, an extraction method of signal features based on multi-scale permutation entropy is proposed by studying the influence of the scale factor on the signal permutation entropy. Second, the detection model of low SNR microseismic events based on the least squares support vector machine is built by performing a multi-scale permutation entropy calculation for the collected vibration signals, constructing a feature vector set of signals. Finally, a comparative analysis of the microseismic events and noise signals in the experiment proves that the different characteristics of the two can be fully expressed by using multi-scale permutation entropy. The detection model of microseismic events combined with the support vector machine, which has the features of high classification accuracy and fast real-time algorithms, can meet the requirements of online, real-time extractions of microseismic events.

  3. An effective hybrid immune algorithm for solving the distributed permutation flow-shop scheduling problem

    Science.gov (United States)

    Xu, Ye; Wang, Ling; Wang, Shengyao; Liu, Min

    2014-09-01

    In this article, an effective hybrid immune algorithm (HIA) is presented to solve the distributed permutation flow-shop scheduling problem (DPFSP). First, a decoding method is proposed to transfer a job permutation sequence to a feasible schedule considering both factory dispatching and job sequencing. Secondly, a local search with four search operators is presented based on the characteristics of the problem. Thirdly, a special crossover operator is designed for the DPFSP, and mutation and vaccination operators are also applied within the framework of the HIA to perform an immune search. The influence of parameter setting on the HIA is investigated based on the Taguchi method of design of experiment. Extensive numerical testing results based on 420 small-sized instances and 720 large-sized instances are provided. The effectiveness of the HIA is demonstrated by comparison with some existing heuristic algorithms and the variable neighbourhood descent methods. New best known solutions are obtained by the HIA for 17 out of 420 small-sized instances and 585 out of 720 large-sized instances.

  4. Weighted-Permutation Entropy Analysis of Resting State EEG from Diabetics with Amnestic Mild Cognitive Impairment

    Directory of Open Access Journals (Sweden)

    Zhijie Bian

    2016-08-01

    Full Text Available Diabetes is a significant public health issue as it increases the risk for dementia and Alzheimer’s disease (AD. In this study, we aim to investigate whether weighted-permutation entropy (WPE and permutation entropy (PE of resting-state EEG (rsEEG could be applied as potential objective biomarkers to distinguish type 2 diabetes patients with amnestic mild cognitive impairment (aMCI from those with normal cognitive function. rsEEG series were acquired from 28 patients with type 2 diabetes (16 aMCI patients and 12 controls, and neuropsychological assessments were performed. The rsEEG signals were analysed using WPE and PE methods. The correlations between the PE or WPE of the rsEEG and the neuropsychological assessments were analysed as well. The WPE in the right temporal (RT region of the aMCI diabetics was lower than the controls, and the WPE was significantly positively correlated to the scores of the Auditory Verbal Learning Test (AVLT (AVLT-Immediate recall, AVLT-Delayed recall, AVLT-Delayed recognition and the Wechsler Adult Intelligence Scale Digit Span Test (WAIS-DST. These findings were not obtained with PE. We concluded that the WPE of rsEEG recordings could distinguish aMCI diabetics from normal cognitive function diabetic controls among the current sample of diabetic patients. Thus, the WPE could be a potential index for assisting diagnosis of aMCI in type 2 diabetes.

  5. Estimating temporal causal interaction between spike trains with permutation and transfer entropy.

    Directory of Open Access Journals (Sweden)

    Zhaohui Li

    Full Text Available Estimating the causal interaction between neurons is very important for better understanding the functional connectivity in neuronal networks. We propose a method called normalized permutation transfer entropy (NPTE to evaluate the temporal causal interaction between spike trains, which quantifies the fraction of ordinal information in a neuron that has presented in another one. The performance of this method is evaluated with the spike trains generated by an Izhikevich's neuronal model. Results show that the NPTE method can effectively estimate the causal interaction between two neurons without influence of data length. Considering both the precision of time delay estimated and the robustness of information flow estimated against neuronal firing rate, the NPTE method is superior to other information theoretic method including normalized transfer entropy, symbolic transfer entropy and permutation conditional mutual information. To test the performance of NPTE on analyzing simulated biophysically realistic synapses, an Izhikevich's cortical network that based on the neuronal model is employed. It is found that the NPTE method is able to characterize mutual interactions and identify spurious causality in a network of three neurons exactly. We conclude that the proposed method can obtain more reliable comparison of interactions between different pairs of neurons and is a promising tool to uncover more details on the neural coding.

  6. Linear algebra of the permutation invariant Crow-Kimura model of prebiotic evolution.

    Science.gov (United States)

    Bratus, Alexander S; Novozhilov, Artem S; Semenov, Yuri S

    2014-10-01

    A particular case of the famous quasispecies model - the Crow-Kimura model with a permutation invariant fitness landscape - is investigated. Using the fact that the mutation matrix in the case of a permutation invariant fitness landscape has a special tridiagonal form, a change of the basis is suggested such that in the new coordinates a number of analytical results can be obtained. In particular, using the eigenvectors of the mutation matrix as the new basis, we show that the quasispecies distribution approaches a binomial one and give simple estimates for the speed of convergence. Another consequence of the suggested approach is a parametric solution to the system of equations determining the quasispecies. Using this parametric solution we show that our approach leads to exact asymptotic results in some cases, which are not covered by the existing methods. In particular, we are able to present not only the limit behavior of the leading eigenvalue (mean population fitness), but also the exact formulas for the limit quasispecies eigenvector for special cases. For instance, this eigenvector has a geometric distribution in the case of the classical single peaked fitness landscape. On the biological side, we propose a mathematical definition, based on the closeness of the quasispecies to the binomial distribution, which can be used as an operational definition of the notorious error threshold. Using this definition, we suggest two approximate formulas to estimate the critical mutation rate after which the quasispecies delocalization occurs.

  7. A space-time permutation scan statistic for disease outbreak detection.

    Directory of Open Access Journals (Sweden)

    Martin Kulldorff

    2005-03-01

    Full Text Available BACKGROUND: The ability to detect disease outbreaks early is important in order to minimize morbidity and mortality through timely implementation of disease prevention and control measures. Many national, state, and local health departments are launching disease surveillance systems with daily analyses of hospital emergency department visits, ambulance dispatch calls, or pharmacy sales for which population-at-risk information is unavailable or irrelevant. METHODS AND FINDINGS: We propose a prospective space-time permutation scan statistic for the early detection of disease outbreaks that uses only case numbers, with no need for population-at-risk data. It makes minimal assumptions about the time, geographical location, or size of the outbreak, and it adjusts for natural purely spatial and purely temporal variation. The new method was evaluated using daily analyses of hospital emergency department visits in New York City. Four of the five strongest signals were likely local precursors to citywide outbreaks due to rotavirus, norovirus, and influenza. The number of false signals was at most modest. CONCLUSION: If such results hold up over longer study times and in other locations, the space-time permutation scan statistic will be an important tool for local and national health departments that are setting up early disease detection surveillance systems.

  8. Matrix genetics, part 1: permutations of positions in triplets and symmetries of genetic matrices

    CERN Document Server

    Petoukhov, Sergey V

    2008-01-01

    The hidden connection between the degeneracy of the vertebrate mitochondria genetic code and the positional permutations inside genetic triplets is described. The Kronecker family of the genetic matrices is investigated, which is based on the genetic matrix [C A; U G], where C, A, U, G are the letters of the genetic alphabet. The natural system of binary numeration of genetic multiplets in the genetic matrices is proposed. The matrix [C A; U G] in the third Kronecker power is the (8*8)-matrix, which contains 64 triplets. When 64 triplets in this matrix are numbered in accordance with the natural system, the coincidence with the famous table of 64 hexagrams of the ancient Chinese book "I Ching" arises. It is significant that peculiarities of the degeneracy of the vertebrate mitochondria genetic code are reflected in the symmetrical black-and-white mosaic of this genetic (8*8)-matrix of 64 triplets. This matrix is reformed into a new mosaic matrix when internal positions in all triplets are permuted simultaneou...

  9. Hamiltonian replica-permutation method and its applications to an alanine dipeptide and amyloid-β(29-42) peptides.

    Science.gov (United States)

    Itoh, Satoru G; Okumura, Hisashi

    2013-11-05

    We propose the Hamiltonian replica-permutation method (RPM) (or multidimensional RPM) for molecular dynamics and Monte Carlo simulations, in which parameters in the Hamiltonian are permuted among more than two replicas with the Suwa-Todo algorithm. We apply the Coulomb RPM, which is one of realization of the Hamiltonian RPM, to an alanine dipeptide and to two amyloid-β(29-42) molecules. The Hamiltonian RPM realizes more efficient sampling than the Hamiltonian replica-exchange method. We illustrate the protein misfolding funnel of amyloid-β(29-42) and reveal its dimerization pathways.

  10. Photoelectron circular dichroism of isopropanolamine

    Science.gov (United States)

    Catone, D.; Turchini, S.; Contini, G.; Prosperi, T.; Stener, M.; Decleva, P.; Zema, N.

    2017-01-01

    Spectroscopies based on circular polarized light are sensitive to the electronic and structural properties of chiral molecules. Photoelectron circular dichroism (PECD) is a powerful technique that combines the chiral sensitivity of the circular polarized light and the electronic information obtained by photoelectron spectroscopy. An experimental and theoretical PECD study of the outer valence and C 1s core states of 1-amino-2-propanol in the gas phase is presented. The experimental dichroic dispersions in the photoelectron kinetic energy are compared with theoretical calculations employing a multicentric basis set of B-spline functions and a Kohn-Sham Hamiltonian. In order to understand analogies and differences in the dichroism of structural isomers bearing the same functional groups, a comparison with previous PECD study of valence band of 2-amino-1-propanol is carried out.

  11. Implementing circularity using partial evaluation

    DEFF Research Database (Denmark)

    Lawall, Julia Laetitia

    2001-01-01

    of an imperative C-like language, by extending the language with a new construct, persistent variables. We show that an extension of partial evaluation can eliminate persistent variables, producing a staged C program. This approach has been implemented in the Tempo specializer for C programs, and has proven useful......Complex data dependencies can often be expressed concisely by defining a variable in terms of part of its own value. Such a circular reference can be naturally expressed in a lazy functional language or in an attribute grammar. In this paper, we consider circular references in the context...

  12. Circular threshold quantum secret sharing

    Institute of Scientific and Technical Information of China (English)

    Yang Yu-Guang; Wen Qiao-Yan

    2008-01-01

    This paper proposes a circular threshold quantum secret sharing (TQSS) scheme with polarized single photons.A polarized single photon sequence runs circularly among any t or more of n parties and any t or more of n parties can reconstruct the secret key when they collaborate.It shows that entanglement is not necessary for quantum secret sharing.Moreover,the theoretic efficiency is improved to approach 100% as the single photons carrying the secret key are deterministically forwarded among any t or more of n parties,and each photon can carry one bit of information without quantum storage.This protocol is feasible with current technology.

  13. Brain computation is organized via power-of-two-based permutation logic

    Directory of Open Access Journals (Sweden)

    Kun Xie

    2016-11-01

    Full Text Available There is considerable scientific interest in understanding how cell assemblies - the long-presumed computational motif - are organized so that the brain can generate cognitive behavior. The Theory of Connectivity proposes that the origin of intelligence is rooted in a power-of-two-based permutation logic (N=2i–1, giving rise to the specific-to-general cell-assembly organization capable of generating specific perceptions and memories, as well as generalized knowledge and flexible actions. We show that this power-of-two-based computational logic is widely used in cortical and subcortical circuits across animal species and is conserved for the processing of a variety of cognitive modalities including appetitive, emotional and social cognitions. However, modulatory neurons, such as dopaminergic neurons, use a simpler logic despite their distinct subtypes. Interestingly, this specific-to-general permutation logic remained largely intact despite the NMDA receptors – the synaptic switch for learning and memory – were deleted throughout adulthood, suggesting that it is likely developmentally pre-configured. Moreover, this logic is implemented in the cortex vertically via combining a random-connectivity strategy in superficial layers 2/3 with nonrandom organizations in deep layers 5/6. This randomness of layers 2/3 cliques – which preferentially encode specific and low-combinatorial features and project inter-cortically – is ideal for maximizing cross-modality novel pattern-extraction, pattern-discrimination, and pattern-categorization using sparse code, consequently explaining why it requires hippocampal offline-consolidation. In contrast, the non-randomness in layers 5/6 - which consists of few specific cliques but a higher portion of more general cliques projecting mostly to subcortical systems – is ideal for robust feedback-control of motivation, emotion, consciousness, and behaviors. These observations suggest that the brain’s basic

  14. Circular polarization observed in bioluminescence

    NARCIS (Netherlands)

    Wijnberg, Hans; Meijer, E.W.; Hummelen, J.C.; Dekkers, H.P.J.M.; Schippers, P.H.; Carlson, A.D.

    1980-01-01

    While investigating circular polarization in luminescence, and having found it in chemiluminescence, we have studied bioluminescence because it is such a widespread and dramatic natural phenomenon. We report here that left and right lanterns of live larvae of the fireflies, Photuris lucicrescens and

  15. Circular polarization in relativistic jets

    NARCIS (Netherlands)

    Macquart, JP

    2003-01-01

    Circular polarization is observed in some relativistic jet sources at radio wavelengths. It is largely associated with activity in the cores of the radio sources, is highly variable, and is strongest during ejection episodes. VLBI imaging and interstellar scintillation arguments show that the degree

  16. Class IIc or Circular Bacteriocins

    Science.gov (United States)

    Martin-Visscher, Leah A.; van Belkum, Marco J.; Vederas, John C.

    The circular bacteriocins produced by Gram-positive bacteria represent a diverse class of antimicrobial peptides. These bacteriocins display enhanced stability compared to linear bacteriocins, which arises from their characteristic circular backbone. Currently, eight unique circular bacteriocins have been identified, and analysis of their gene clusters indicates that they likely utilize complex mechanisms for maturation and secretion, as well as for immunity. These bacteriocins target the cytoplasmic membrane of sensitive cells, leading to pore formation that results in loss of ions, dissipation of membrane potential, and ultimately, cell death. Structural studies suggest that despite variation in their sequences, most of these bacteriocins likely adopt a common three-dimensional architecture, consisting of four or five tightly packed helices encompassing a hydrophobic core. There are many mysteries surrounding the biosynthesis of these peptides, particularly in regard to the mechanism by which they are cyclized. Elucidation of such a mechanism may provide exciting new approaches to the bioengineering of new, stable, and antimicrobially active circular peptides.

  17. Iterative decoding of Generalized Parallel Concatenated Block codes using cyclic permutations

    Directory of Open Access Journals (Sweden)

    Hamid Allouch

    2012-09-01

    Full Text Available Iterative decoding techniques have gain popularity due to their performance and their application in most communications systems. In this paper, we present a new application of our iterative decoder on the GPCB (Generalized Parallel Concatenated Block codes which uses cyclic permutations. We introduce a new variant of the component decoder. After extensive simulation; the obtained result is very promising compared with several existing methods. We evaluate the effects of various parameters component codes, interleaver size, block size, and the number of iterations. Three interesting results are obtained; the first one is that the performances in terms of BER (Bit Error Rate of the new constituent decoder are relatively similar to that of original one. Secondly our turbo decoding outperforms another turbo decoder for some linear block codes. Thirdly the proposed iterative decoding of GPCB-BCH (75, 51 is about 2.1dB from its Shannon limit.

  18. Multivariate permutation entropy and its application for complexity analysis of chaotic systems

    Science.gov (United States)

    He, Shaobo; Sun, Kehui; Wang, Huihai

    2016-11-01

    To measure the complexity of multivariate systems, the multivariate permutation entropy (MvPE) algorithm is proposed. It is employed to measure complexity of multivariate system in the phase space. As an application, MvPE is applied to analyze the complexity of chaotic systems, including hyperchaotic Hénon map, fractional-order simplified Lorenz system and financial chaotic system. Results show that MvPE algorithm is effective for analyzing the complexity of the multivariate systems. It also shows that fractional-order system does not become more complex with derivative order varying. Compared with PE, MvPE has better robustness for noise and sampling interval, and the results are not affected by different normalization methods.

  19. Construction of mutually unbiased maximally entangled bases through permutations of Hadamard matrices

    Science.gov (United States)

    xu, Dengming

    2017-03-01

    We construct mutually unbiased maximally entangled bases (MUMEBs) in bipartite system C^d⊗ C^d (d≥ 3) with d a power of a prime number. Precisely, by means of permutation matrices and Hadamard matrices, we construct 2(d-1) MUMEBs in C^d⊗ C}^d. It follows that M(d,d)≥ 2(d-1), which is twice the number given in Liu et al. (2016), where M( d, d) denotes the maximal size of all sets of MUMEBs in C^d⊗ C}^d. In addition, let q be another power of a prime number, we construct MUMEBs in C^d⊗ C^{qd} from those in C^d⊗ C^d by the use of the tensor product of unitary matrices.

  20. Construção de códigos ciclicamente permutáveis

    OpenAIRE

    LEMOS NETO, José Sampaio de

    2015-01-01

    Um código ciclicamente permutável (código CP) é um código de bloco binário cujas palavrasc ódigo são ciclicamente distintas e possuem ordem cíclica plena, isto é, ordem cíclica igual ao comprimento do bloco. Um código CP pode ser construído por meio de um código cíclico. Para isto, selecionam-se as palavras do código cíclico que são ciclicamente distintas e possuem ordem cíclica plena. Um procedimento que seleciona diretamente, por meio de uma condição matemática, as palavras d...

  1. Accurate DOSY measure of out-of-equilibrium systems by permutated DOSY (p-DOSY)

    CERN Document Server

    Oikonomou, Maria; Velders, Aldrik H; Delsuc, Marc-André

    2015-01-01

    NMR spectroscopy is a perfect tool for monitoring in-situ chemical reactions. In particular, DOSY measurement is well suited to characterize transient species by the determination of their sizes. However, here we bring to light a difficulty in the DOSY experiments performed on out-of-equilibrium systems. On such a system, the evolution of the concentration of species interferes with the measurement process, and creates a bias on the diffusion coefficient determination that may lead to erroneous interpretations. We show that a random permutation of the series of gradient strengths used during the DOSY experiment allows to average out this bias. This approach, that we name p-DOSY does not require changes in the the pulse sequences nor in the processing software, and restores completely the full accuracy of the measure. This technique is demonstrated on the monitoring of the anomerization reaction of $\\alpha$ to $\\beta$ glucose.

  2. Quantum tests for the linearity and permutation invariance of Boolean functions

    Energy Technology Data Exchange (ETDEWEB)

    Hillery, Mark [Department of Physics, Hunter College of the City University of New York, 695 Park Avenue, New York, New York 10021 (United States); Andersson, Erika [SUPA, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS (United Kingdom)

    2011-12-15

    The goal in function property testing is to determine whether a black-box Boolean function has a certain property or is {epsilon}-far from having that property. The performance of the algorithm is judged by how many calls need to be made to the black box in order to determine, with high probability, which of the two alternatives is the case. Here we present two quantum algorithms, the first to determine whether the function is linear and the second to determine whether it is symmetric (invariant under permutations of the arguments). Both require order {epsilon}{sup -2/3} calls to the oracle, which is better than known classical algorithms. In addition, in the case of linearity testing, if the function is linear, the quantum algorithm identifies which linear function it is. The linearity test combines the Bernstein-Vazirani algorithm and amplitude amplification, while the test to determine whether a function is symmetric uses projective measurements and amplitude amplification.

  3. Permutation Tests of Hierarchical Cluster Analyses of Carrion Communities and Their Potential Use in Forensic Entomology.

    Science.gov (United States)

    van der Ham, Joris L

    2016-05-19

    Forensic entomologists can use carrion communities' ecological succession data to estimate the postmortem interval (PMI). Permutation tests of hierarchical cluster analyses of these data provide a conceptual method to estimate part of the PMI, the post-colonization interval (post-CI). This multivariate approach produces a baseline of statistically distinct clusters that reflect changes in the carrion community composition during the decomposition process. Carrion community samples of unknown post-CIs are compared with these baseline clusters to estimate the post-CI. In this short communication, I use data from previously published studies to demonstrate the conceptual feasibility of this multivariate approach. Analyses of these data produce series of significantly distinct clusters, which represent carrion communities during 1- to 20-day periods of the decomposition process. For 33 carrion community samples, collected over an 11-day period, this approach correctly estimated the post-CI within an average range of 3.1 days.

  4. A new permutation-based method for assessing agreement between two observers making replicated quantitative readings.

    Science.gov (United States)

    Pan, Yi; Haber, Michael; Gao, Jingjing; Barnhart, Huiman X

    2012-09-10

    The coefficient of individual equivalence is a permutation-based measure of agreement between two observers making replicated readings on each subject. It compares the observed disagreement between the observers to the expected disagreement under individual equivalence. Individual equivalence of observers requires that for every study subject, the conditional distributions of the readings of the observers given the subject's characteristics are identical. Therefore, under individual equivalence it does not matter which observer is making a particular reading on a given subject. We introduce both nonparametric and parametric methods to estimate the coefficient as well as its standard error. We compare the new coefficient with the coefficient of individual agreement and with the concordance correlation coefficient. We also evaluate the performance of the estimates of the new coefficient via simulations and illustrate this new approach using data from a study comparing two noninvasive techniques for measuring carotid stenosis to an invasive gold standard.

  5. Permutation methods for the structured exploratory data analysis (SEDA) of familial trait values.

    Science.gov (United States)

    Karlin, S; Williams, P T

    1984-07-01

    A collection of functions that contrast familial trait values between and across generations is proposed for studying transmission effects and other collateral influences in nuclear families. Two classes of structured exploratory data analysis (SEDA) statistics are derived from ratios of these functions. SEDA-functionals are the empirical cumulative distributions of the ratio of the two contrasts computed within each family. SEDA-indices are formed by first averaging the numerator and denominator contrasts separately over the population and then forming their ratio. The significance of SEDA results are determined by a spectrum of permutation techniques that selectively shuffle the trait values across families. The process systematically alters certain family structure relationships while keeping other familial relationships intact. The methodology is applied to five data examples of plasma total cholesterol concentrations, reported height values, dermatoglyphic pattern intensity index scores, measurements of dopamine-beta-hydroxylase activity, and psychometric cognitive test results.

  6. New gridded daily climatology of Finland: Permutation-based uncertainty estimates and temporal trends in climate

    Science.gov (United States)

    Aalto, Juha; Pirinen, Pentti; Jylhä, Kirsti

    2016-04-01

    Long-term time series of key climate variables with a relevant spatiotemporal resolution are essential for environmental science. Moreover, such spatially continuous data, based on weather observations, are commonly used in, e.g., downscaling and bias correcting of climate model simulations. Here we conducted a comprehensive spatial interpolation scheme where seven climate variables (daily mean, maximum, and minimum surface air temperatures, daily precipitation sum, relative humidity, sea level air pressure, and snow depth) were interpolated over Finland at the spatial resolution of 10 × 10 km2. More precisely, (1) we produced daily gridded time series (FMI_ClimGrid) of the variables covering the period of 1961-2010, with a special focus on evaluation and permutation-based uncertainty estimates, and (2) we investigated temporal trends in the climate variables based on the gridded data. National climate station observations were supplemented by records from the surrounding countries, and kriging interpolation was applied to account for topography and water bodies. For daily precipitation sum and snow depth, a two-stage interpolation with a binary classifier was deployed for an accurate delineation of areas with no precipitation or snow. A robust cross-validation indicated a good agreement between the observed and interpolated values especially for the temperature variables and air pressure, although the effect of seasons was evident. Permutation-based analysis suggested increased uncertainty toward northern areas, thus identifying regions with suboptimal station density. Finally, several variables had a statistically significant trend indicating a clear but locally varying signal of climate change during the last five decades.

  7. Circular spectropolarimetric sensing of chiral photosystems in decaying leaves

    Science.gov (United States)

    Patty, C. H. Lucas; Visser, Luuk J. J.; Ariese, Freek; Buma, Wybren Jan; Sparks, William B.; van Spanning, Rob J. M.; Röling, Wilfred F. M.; Snik, Frans

    2017-03-01

    Circular polarization spectroscopy has proven to be an indispensable tool in photosynthesis research and (bio)molecular research in general. Oxygenic photosystems typically display an asymmetric Cotton effect around the chlorophyll absorbance maximum with a signal ≤ 1 % . In vegetation, these signals are the direct result of the chirality of the supramolecular aggregates. The circular polarization is thus directly influenced by the composition and architecture of the photosynthetic macrodomains, and is thereby linked to photosynthetic functioning. Although ordinarily measured only on a molecular level, we have developed a new spectropolarimetric instrument, TreePol, that allows for both laboratory and in-the-field measurements. Through spectral multiplexing, TreePol is capable of fast measurements with a sensitivity of ∼ 1 *10-4 and is therefore suitable of non-destructively probing the molecular architecture of whole plant leaves. We have measured the chiroptical evolution of Hedera helix leaves for a period of 22 days. Spectrally resolved circular polarization measurements (450-900 nm) on whole leaves in transmission exhibit a strong decrease in the polarization signal over time after plucking, which we accredit to the deterioration of chiral macro-aggregates. Chlorophyll a levels measured over the same period by means of UV-vis absorption and fluorescence spectroscopy showed a much smaller decrease. With these results we are able to distinguish healthy from deteriorating leaves. Hereby we indicate the potency of circular polarization spectroscopy on whole and intact leaves as a nondestructive tool for structural and plant stress assessment. Additionally, we underline the establishment of circular polarization signals as remotely accessible means of detecting the presence of extraterrestrial life.

  8. The maximal C(3) self-complementary trinucleotide circular code X in genes of bacteria, eukaryotes, plasmids and viruses.

    Science.gov (United States)

    Michel, Christian J

    2015-09-07

    In 1996, a set X of 20 trinucleotides is identified in genes of both prokaryotes and eukaryotes which has in average the highest occurrence in reading frame compared to the two shifted frames (Arquès and Michel, 1996). Furthermore, this set X has an interesting mathematical property as X is a maximal C(3) self-complementary trinucleotide circular code (Arquès and Michel, 1996). In 2014, the number of trinucleotides in prokaryotic genes has been multiplied by a factor of 527. Furthermore, two new gene kingdoms of plasmids and viruses contain enough trinucleotide data to be analysed. The approach used in 1996 for identifying a preferential frame for a trinucleotide is quantified here with a new definition analysing the occurrence probability of a complementary/permutation (CP) trinucleotide set in a gene kingdom. Furthermore, in order to increase the statistical significance of results compared to those of 1996, the circular code X is studied on several gene taxonomic groups in a kingdom. Based on this new statistical approach, the circular code X is strengthened in genes of prokaryotes and eukaryotes, and now also identified in genes of plasmids. A subset of X with 18 or 16 trinucleotides is identified in genes of viruses. Furthermore, a simple probabilistic model based on the independent occurrence of trinucleotides in reading frame of genes explains the circular code frequencies and asymmetries observed in the shifted frames in all studied gene kingdoms. Finally, the developed approach allows to identify variant X codes in genes, i.e. trinucleotide codes which differ from X. In genes of bacteria, eukaryotes and plasmids, 14 among the 47 studied gene taxonomic groups (about 30%) have variant X codes. Seven variant X codes are identified with at least 16 trinucleotides of X. Two variant X codes XA in cyanobacteria and plasmids of cyanobacteria, and XD in birds are self-complementary, without permuted trinucleotides but non-circular. Five variant X codes XB in

  9. Control of a Circular Jet

    CERN Document Server

    Gohil, Trushar B; Muralidhar, K

    2010-01-01

    The present study report direct numerical simulation (DNS) of a circular jet and the effect of a large scale perturbation at the jet inlet. The perturbation is used to control the jet for increased spreading. Dual-mode perturbation is obtained by combining an axisymmetric excitation with the helical. In the fluid dynamics videos, an active control of the circular jet at a Reynolds number of 2000 for various frequency ratios (both integer and non-integer) has been demonstrated. When the frequency ratio is fixed to 2, bifurcation of the jet on a plane is evident. However, for a non-integer frequency ratio, the axisymmetric jet is seen to bloom in all directions.

  10. Insights into circular RNA biology

    DEFF Research Database (Denmark)

    Ebbesen, Karoline K; Hansen, Thomas B; Kjems, Jørgen

    2016-01-01

    Circular RNAs (circRNAs) are a novel class of non-coding RNA characterized by a covalently closed-loop structure generated through a special type of alternative splicing termed backsplicing. CircRNAs are emerging as a heterogeneous class of molecules involved in modulating gene expression by regu...... and lastly, an outlook with a focus on unanswered questions regarding circRNA biology will be included....

  11. Granger causality for circular variables

    Energy Technology Data Exchange (ETDEWEB)

    Angelini, Leonardo; Pellicoro, Mario [Istituto Nazionale di Fisica Nucleare, Sezione di Bari (Italy); Dipartimento di Fisica, University of Bari (Italy); Stramaglia, Sebastiano, E-mail: sebastiano.stramaglia@ba.infn.i [Istituto Nazionale di Fisica Nucleare, Sezione di Bari (Italy); Dipartimento di Fisica, University of Bari (Italy)

    2009-06-29

    In this Letter we discuss the use of Granger causality to the analyze systems of coupled circular variables, by modifying a recently proposed method for multivariate analysis of causality. We show the application of the proposed approach on several Kuramoto systems, in particular one living on networks built by preferential attachment and a model for the transition from deeply to lightly anaesthetized states. Granger causalities describe the flow of information among variables.

  12. Capacitance of circular patch resonator

    Energy Technology Data Exchange (ETDEWEB)

    Miano, G.; Verolino, L. [Dip. di Ingegneria Elettrica, Ist. Nazionale di Fisica Nucleare, Naples (Italy); Panariello, G. [Dip. di Ingegneria Elettronica, Naples (Italy); Vaccaro, V.G. [Ist. Nazionale di Fisica Nucleare, Naples (Italy). Dipt. di Scienze Fisiche

    1995-11-01

    In this paper the capacitance of the circular microstrip patch resonator is computed. It is shown that the electrostatic problem can be formulated as a system of dual integral equations, and the most interesting techniques of solutions of these systems are reviewed. Some useful approximated formulas for the capacitance are derived and plots of the capacitance are finally given in a wide range of dielectric constants.

  13. Circular Polarization in Pulsar Integrated Profiles: Updates

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    We update the systematic studies of circular polarization in integrated pulse profiles by Han et al. Data of circular polarization profiles are compiled. Sense reversals can occur in core or cone components, or near the intersection between components. The correlation between the sense of circular polarization and the sense of position angle variation for conal-double pulsars is confirmed with a much large database. Circular polarization of some pulsars has clear changes with frequency.Circular polarization of millisecond pulsars is marginally different from that of normal pulsars.

  14. Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

    Directory of Open Access Journals (Sweden)

    Haas Jürgen

    2010-02-01

    Full Text Available Abstract Background Yeast two-hybrid (Y2H screens have been among the most powerful methods to detect and analyze protein-protein interactions. However, they suffer from a significant degree of false negatives, i.e. true interactions that are not detected, and to a certain degree from false positives, i.e. interactions that appear to take place only in the context of the Y2H assay. While the fraction of false positives remains difficult to estimate, the fraction of false negatives in typical Y2H screens is on the order of 70-90%. Here we present novel Y2H vectors that significantly decrease the number of false negatives and help to mitigate the false positive problem. Results We have constructed two new vectors (pGBKCg and pGADCg that allow us to make both C-terminal fusion proteins of DNA-binding and activation domains. Both vectors can be combined with existing vectors for N-terminal fusions and thus allow four different bait-prey combinations: NN, CC, NC, and CN. We have tested all ~4,900 pairwise combinations of the 70 Varicella-Zoster-Virus (VZV proteins for interactions, using all possible combinations. About ~20,000 individual Y2H tests resulted in 182 NN, 89 NC, 149 CN, and 144 CC interactions. Overlap between screens ranged from 17% (NC-CN to 43% (CN-CC. Performing four screens (i.e. permutations instead of one resulted in about twice as many interactions and thus much fewer false negatives. In addition, interactions that are found in multiple combinations confirm each other and thus provide a quality score. This study is the first systematic analysis of such N- and C-terminal Y2H vectors. Conclusions Permutations of C- and N-terminal Y2H vectors dramatically increase the coverage of interactome studies and thus significantly reduce the number of false negatives. We suggest that future interaction screens should use such vector combinations on a routine basis, not the least because they provide a built-in quality score for Y2H

  15. Mass textures and wolfenstein parameters from breaking the flavour permutational symmetry

    Energy Technology Data Exchange (ETDEWEB)

    Mondragon, A; Rivera, T. [Instituto de Fisica, Universidad Nacional Autonoma de Mexico,Mexico D.F. (Mexico); Rodriguez Jauregui, E. [Deutsches Elekronen-Synchrotron, Theory Group, Hamburg (Germany)

    2001-12-01

    We will give an overview of recent progress in the phenomenological study of quark mass matrices, quark flavour mixings and CP-violation with emphasis on the possibility of an underlying discrete, flavour permutational symmetry and its breaking, from which realistic models of mass generation could be built. The quark mixing angles and CP-violating phase, as well as the Wolfenstein parameters are given in terms of four quark mass ratios and only two parameters (Z{sup 1}/2, {phi}) characterizing the symmetry breaking pattern. Excellent agreement with all current experimental data is found. [Spanish] Daremos una visita panoramica del progreso reciente en el estudio fenomenologico de las matrices de masas y de mezclas del sabor de los quarks y la violacion de PC, con enfasis en la posibilidad de que, subyacentes al problema, se halle una simetria discreta, permutacional del sabor y su rompimiento a partir de las cuales se puedan construir modelos realistas de la generacion de las masas. Los angulos de mezcla de los quarks y la fase que viola CP, asi como los parametros de Wolfenstein se dan en terminos de cuatro razones de masas de los quarks y solamente dos parametros (Z{sup 1}/2, {phi}) que caracterizan el patron del rompimiento de la simetria. Los resultados se encuentran en excelente acuerdo con todos los datos experimentales mas recientes.

  16. CRYPTANALYSIS OF AN IMAGE ENCRYPTION SCHEME WITH A PSEUDORANDOM PERMUTATION AND ITS IMPROVED VERSION

    Institute of Scientific and Technical Information of China (English)

    Wang Jing; Jiang Guoping; Lin Bing

    2012-01-01

    Under Kerckhoff principle,this paper discusses the security property of an image encryption scheme with a pseudorandom permutation.Some findings on the security problems of the algorithm are reported in the following:(1) If each row or column of the plain-image matrix is the same,the receiver cannot decrypt correctly.(2) Each plain-text word is correlated with single cipher-text word,but independent of other cipher-text word,which cannot meet the principles of algorithm designdiffusion and confusion.(3) If the cycle numbers β are relatively small,statistics attack can be used to reveal some visual information of any other plain-images encrypted with the same secret key.Considering the above problems,we propose an improved algorithm and then analyze its performance.Theoretical analysis and simulation results show that the improved algorithm can obtain better cryptographic properties,such as statistical characteristics,difference characteristics,and so on.

  17. A Highly Flexible LDPC Decoder using Hierarchical Quasi-Cyclic Matrix with Layered Permutation

    Directory of Open Access Journals (Sweden)

    Vikram Arkalgud Chandrasetty

    2012-03-01

    Full Text Available Hardware implementation of partially-parallel Low-Density Parity-Check (LDPC decoders using unstructured random matrices is very complex and requires huge hardware resources. To alleviate the complexity and minimize resource requirements, structured LDPC matrices are used. This paper presents a novel technique for constructing a multi-level Hierarchical Quasi-Cyclic (HQC structured matrix for LDPC decoder. A unique multi-level structure of the proposed matrix provides flexibility in generating different code lengths and code rates for various applications such as WiMAX, WLAN and DVB-S2. In addition, different combinations of permuted sub-matrices are inserted in layers at different levels of matrix hierarchy to provide virtual randomness in the LDPC matrix. Simulation results show that the HQC matrices generated using the proposed technique have a marginal loss of less than 0.1 dB at a bit error rate (BER performance 10-5 compared to unstructured random matrices. A hardware model of the proposed matrix structure has been developed and synthesized on Xilinx FPGA to verify the flexibility features, hardware requirements and to analyze the performance of the LDPC decoder.

  18. Detecting change in biological rhythms: a multivariate permutation test approach to Fourier-transformed data.

    Science.gov (United States)

    Blackford, Jennifer Urbano; Salomon, Ronald M; Waller, Niels G

    2009-02-01

    Treatment-related changes in neurobiological rhythms are of increasing interest to psychologists, psychiatrists, and biological rhythms researchers. New methods for analyzing change in rhythms are needed, as most common methods disregard the rich complexity of biological processes. Large time series data sets reflect the intricacies of underlying neurobiological processes, but can be difficult to analyze. We propose the use of Fourier methods with multivariate permutation test (MPT) methods for analyzing change in rhythms from time series data. To validate the use of MPT for Fourier-transformed data, we performed Monte Carlo simulations and compared statistical power and family-wise error for MPT to Bonferroni-corrected and uncorrected methods. Results show that MPT provides greater statistical power than Bonferroni-corrected tests, while appropriately controlling family-wise error. We applied this method to human, pre- and post-treatment, serially-sampled neurotransmitter data to confirm the utility of this method using real data. Together, Fourier with MPT methods provides a statistically powerful approach for detecting change in biological rhythms from time series data.

  19. Monitoring the informational efficiency of European corporate bond markets with dynamical permutation min-entropy

    Science.gov (United States)

    Zunino, Luciano; Bariviera, Aurelio F.; Guercio, M. Belén; Martinez, Lisana B.; Rosso, Osvaldo A.

    2016-08-01

    In this paper the permutation min-entropy has been implemented to unveil the presence of temporal structures in the daily values of European corporate bond indices from April 2001 to August 2015. More precisely, the informational efficiency evolution of the prices of fifteen sectorial indices has been carefully studied by estimating this information-theory-derived symbolic tool over a sliding time window. Such a dynamical analysis makes possible to obtain relevant conclusions about the effect that the 2008 credit crisis has had on the different European corporate bond sectors. It is found that the informational efficiency of some sectors, namely banks, financial services, insurance, and basic resources, has been strongly reduced due to the financial crisis whereas another set of sectors, integrated by chemicals, automobiles, media, energy, construction, industrial goods & services, technology, and telecommunications has only suffered a transitory loss of efficiency. Last but not least, the food & beverage, healthcare, and utilities sectors show a behavior close to a random walk practically along all the period of analysis, confirming a remarkable immunity against the 2008 financial crisis.

  20. An Efficient Constructive Heuristic for Permutation Flow Shops to Minimize Total Flowtime

    Institute of Scientific and Technical Information of China (English)

    LIXiaoping; WUCheng

    2005-01-01

    In this paper, FFC (Fast fiowtime-computing) is presented for fiowtime computing in flow shops. The CPU-time of an algorithm for flow shops can be reduced considerably by replacing classical flowtime computing with FFC based on the facts that FFC is faster than the classical one and that flowtime computing of schedules/partial schedules is the main computational burden of most algorithms for flow shops. This is illustrated by modifying RZ, one of the three best existing heuristics(FL, WY and RZ) for flowtime minimization, with FFC in which about half of the CPU-time is saved. An efficient constructive heuristic is proposed for permutation flow shops with flowtime minimization, of which the CPU-time is more than that of RZ but much less than those of FL and WY. Our proposal is compared with FL, WYand RZ in terms of ARPD (Average relative percentage deviation), STD (Standard deviation) and BEST (number of best solutions obtained for a given size of problems). Computational results show that the proposed heuristic outperforms WY and RZ, and also outperforms FL when job-machine ratio is small. However, as the ratio increases, the proposal will finally be outperformed by FL but needs far less CPU-time than FL does.

  1. Multiple Memory Structure Bit Reversal Algorithm Based on Recursive Patterns of Bit Reversal Permutation

    Directory of Open Access Journals (Sweden)

    K. K. L. B. Adikaram

    2014-01-01

    Full Text Available With the increasing demand for online/inline data processing efficient Fourier analysis becomes more and more relevant. Due to the fact that the bit reversal process requires considerable processing time of the Fast Fourier Transform (FFT algorithm, it is vital to optimize the bit reversal algorithm (BRA. This paper is to introduce an efficient BRA with multiple memory structures. In 2009, Elster showed the relation between the first and the second halves of the bit reversal permutation (BRP and stated that it may cause serious impact on cache performance of the computer, if implemented. We found exceptions, especially when the said index mapping was implemented with multiple one-dimensional memory structures instead of multidimensional or one-dimensional memory structure. Also we found a new index mapping, even after the recursive splitting of BRP into equal sized slots. The four-array and the four-vector versions of BRA with new index mapping reported 34% and 16% improvement in performance in relation to similar versions of Linear BRA of Elster which uses single one-dimensional memory structure.

  2. Usefulness of permutation entropy as an anesthetic depth indicator in children.

    Science.gov (United States)

    Kim, Pil-Jong; Kim, Hong-Gee; Noh, Gyu-Jeong; Koo, Yong-Seo; Shin, Teo Jeon

    2015-04-01

    Permutation entropy (PE) as a complexity measure has been introduced to monitor anesthetic depth for adult. However, PE has not yet been evaluated for its clinical applicability as an indicator of anesthetic depth in children. Therefore, in order to investigate the validity of PE, we compared PE with BIS using pharmacodynamic (PD) modeling in children. Electroencephalogram (EEG) was obtained from BIS monitor during sevoflurane deepening and lightening protocol. End-tidal sevoflurane concentration (Etsevo) and BIS were measured simultaneously. PE was calculated from the processed EEG with the scale ranging from 0 to 100. NONMEM software was used to investigate the PD relationship between Etsevo with BIS and PE. Adjusted PE (APE) values were decreased as anesthesia deepened. APE and BIS showed significant linear correlation (P Emax model which describes the relationship between Etsevo and APE/BIS (E o : 78, E max : 17.6, C e50 : 2.5 vol%; γ: 13.1, k eo : 0.47 min(-1) for APE; E o : 89.4; E max : 15.7; C e50 : 2.2 vol%; γ: 6.6, keo: 0.52 min(-1) for BIS). PE seems to be a useful indicator of anesthetic depth, which is comparable to BIS in children.

  3. Reduced-density-matrix spectrum and block entropy of permutationally invariant many-body systems.

    Science.gov (United States)

    Salerno, Mario; Popkov, Vladislav

    2010-07-01

    Spectral properties of the reduced density matrix (RDM) of permutational invariant quantum many-body systems are investigated. The RDM block diagonalization which accounts for all symmetries of the Hamiltonian is achieved. The analytical expression of the RDM spectrum is provided for arbitrary parameters and rigorously proved in the thermodynamical limit. The existence of several sum rules and recurrence relations among RDM eigenvalues is also demonstrated and the distribution function of RDM eigenvalues (including degeneracies) characterized. In particular, we prove that the distribution function approaches a two-dimensional Gaussian in the limit of large subsystem sizes n>1. As a physical application we discuss the von Neumann entropy (VNE) of a block of size n for a system of hard-core bosons on a complete graph, as a function of n and of the temperature T. The occurrence of a crossover of VNE from purely logarithmic behavior at T=0 to a purely linear behavior in n for T≥Tc, is demonstrated.

  4. Transportation Mode Detection Based on Permutation Entropy and Extreme Learning Machine

    Directory of Open Access Journals (Sweden)

    Lei Zhang

    2015-01-01

    Full Text Available With the increasing prevalence of GPS devices and mobile phones, transportation mode detection based on GPS data has been a hot topic in GPS trajectory data analysis. Transportation modes such as walking, driving, bus, and taxi denote an important characteristic of the mobile user. Longitude, latitude, speed, acceleration, and direction are usually used as features in transportation mode detection. In this paper, first, we explore the possibility of using Permutation Entropy (PE of speed, a measure of complexity and uncertainty of GPS trajectory segment, as a feature for transportation mode detection. Second, we employ Extreme Learning Machine (ELM to distinguish GPS trajectory segments of different transportation. Finally, to evaluate the performance of the proposed method, we make experiments on GeoLife dataset. Experiments results show that we can get more than 50% accuracy when only using PE as a feature to characterize trajectory sequence. PE can indeed be effectively used to detect transportation mode from GPS trajectory. The proposed method has much better accuracy and faster running time than the methods based on the other features and SVM classifier.

  5. Weighted permutation entropy based on different symbolic approaches for financial time series

    Science.gov (United States)

    Yin, Yi; Shang, Pengjian

    2016-02-01

    In this paper, we introduce weighted permutation entropy (WPE) and three different symbolic approaches to investigate the complexities of stock time series containing amplitude-coded information and explore the influence of using different symbolic approaches on obtained WPE results. We employ WPE based on symbolic approaches to the US and Chinese stock markets and make a comparison between the results of US and Chinese stock markets. Three symbolic approaches are able to help the complexity containing in the stock time series by WPE method drop whatever the embedding dimension is. The similarity between these stock markets can be detected by the WPE based on Binary Δ-coding-method, while the difference between them can be revealed by the WPE based on σ-method, Max-min-method. The combinations of the symbolic approaches: σ-method and Max-min-method, and WPE method are capable of reflecting the multiscale structure of complexity by different time delay and analyze the differences between complexities of stock time series in more detail and more accurately. Furthermore, the correlations between stock markets in the same region and the similarities hidden in the S&P500 and DJI, ShangZheng and ShenCheng are uncovered by the comparison of the WPE based on Binary Δ-coding-method of six stock markets.

  6. Permutation entropy of finite-length white-noise time series

    Science.gov (United States)

    Little, Douglas J.; Kane, Deb M.

    2016-08-01

    Permutation entropy (PE) is commonly used to discriminate complex structure from white noise in a time series. While the PE of white noise is well understood in the long time-series limit, analysis in the general case is currently lacking. Here the expectation value and variance of white-noise PE are derived as functions of the number of ordinal pattern trials, N , and the embedding dimension, D . It is demonstrated that the probability distribution of the white-noise PE converges to a χ2 distribution with D !-1 degrees of freedom as N becomes large. It is further demonstrated that the PE variance for an arbitrary time series can be estimated as the variance of a related metric, the Kullback-Leibler entropy (KLE), allowing the qualitative N ≫D ! condition to be recast as a quantitative estimate of the N required to achieve a desired PE calculation precision. Application of this theory to statistical inference is demonstrated in the case of an experimentally obtained noise series, where the probability of obtaining the observed PE value was calculated assuming a white-noise time series. Standard statistical inference can be used to draw conclusions whether the white-noise null hypothesis can be accepted or rejected. This methodology can be applied to other null hypotheses, such as discriminating whether two time series are generated from different complex system states.

  7. 基于噪声检测的置换混叠图像盲分离%Blind Separation for Permuted Alias Image Based on Noise Detection

    Institute of Scientific and Technical Information of China (English)

    段新涛; 方勇

    2011-01-01

    Permuted alias image is a new type of single channel blind separation, which is fundamentally different from traditional single channel blind separation in theory and method. In this paper, an algorithm about permuted alias image blind separation based noise detection is proposed according to a class of permuted alias image infecting noise in permuting region. Firstly a mathematical model of permuted alias image is presented. Then a dictionary about sparse representation is obtained by training samples from permuted alias image with K-SVD dictionary learning algorithm restrained by nonzeros number. The permuted alias image is denoised by utilizing learned dictionary. Size and location of permuting region is found out by detecting the subtraction image, which is defined as difference between the denoised permuted alias image and original permuted alias image. The permuting region is optimized by implementing image morphological operation and is separated from the permuted alias image by setting threshold. The results show that permuting image can be separated efficiently from the permuted alias image, not affected by size, location, number of permuting image and noise level on permuting image.%置换混叠图像盲分离作为一类新型的单信道盲分离,在理论和方法上与传统的单信道盲分离有着本质的不同.针对一类置换区域含噪声的置换混叠图像,本文提出一种基于噪声检测的置换混叠图像盲分离算法.本文首先给出置换混叠图像的数学模型,对置换混叠图像用非零元个数约束的K-SVD算法进行训练得到其稀疏表示的字典,利用学习得到的字典对置换混叠图像去噪,然后利用去噪后的置换混叠图像与原图像作差运算得到差图像,通过检测差图像来确定出置换区域的位置和大小.并利用图像形态学运算优化置换区域,采用阈值化操作分离出置换图像.实验结果表明,本文算法能够较好的从置换混叠图像中

  8. Boxicity of Circular Arc Graphs

    OpenAIRE

    Bhowmick, Diptendu; Chandran, L. Sunil

    2008-01-01

    A $k$-dimensional box is the cartesian product $R_1 \\times R_2 \\times ... \\times R_k$ where each $R_i$ is a closed interval on the real line. The {\\it boxicity} of a graph $G$, denoted as $box(G)$, is the minimum integer $k$ such that $G$ can be represented as the intersection graph of a collection of $k$-dimensional boxes: that is two vertices are adjacent if and only if their corresponding boxes intersect. A circular arc graph is a graph that can be represented as the intersection graph of ...

  9. Deterministic Circular Self Test Path

    Institute of Scientific and Technical Information of China (English)

    WEN Ke; HU Yu; LI Xiaowei

    2007-01-01

    Circular self test path (CSTP) is an attractive technique for testing digital integrated circuits(IC) in the nanometer era, because it can easily provide at-speed test with small test data volume and short test application time. However, CSTP cannot reliably attain high fault coverage because of difficulty of testing random-pattern-resistant faults. This paper presents a deterministic CSTP (DCSTP) structure that consists of a DCSTP chain and jumping logic, to attain high fault coverage with low area overhead. Experimental results on ISCAS'89 benchmarks show that 100% fault coverage can be obtained with low area overhead and CPU time, especially for large circuits.

  10. Encryption using circular harmonic key

    OpenAIRE

    Jorge Enrique Rueda-Parada

    2015-01-01

    En este trabajo presento un estudio sobre la varianza a la rota ción de la llave del procesador de encriptación basado en la tr ansformada de Fourier. Determiné que la llave en coordenadas rectangulares pe rmite un nivel de tolerancia inferior a 0.2 grados de rotación de la llave en el proceso de decriptación. Entonces la solución es construir la llave en coordenadas polares, por medio de una expansión en armónicos circulares. De esta manera, el umbral de tolerancia a um...

  11. Unifying the rotational and permutation symmetry of nuclear spin states: Schur-Weyl duality in molecular physics

    Science.gov (United States)

    Schmiedt, Hanno; Jensen, Per; Schlemmer, Stephan

    2016-08-01

    In modern physics and chemistry concerned with many-body systems, one of the mainstays is identical-particle-permutation symmetry. In particular, both the intra-molecular dynamics of a single molecule and the inter-molecular dynamics associated, for example, with reactive molecular collisions are strongly affected by selection rules originating in nuclear-permutation symmetry operations being applied to the total internal wavefunctions, including nuclear spin, of the molecules involved. We propose here a general tool to determine coherently the permutation symmetry and the rotational symmetry (associated with the group of arbitrary rotations of the entire molecule in space) of molecular wavefunctions, in particular the nuclear-spin functions. Thus far, these two symmetries were believed to be mutually independent and it has even been argued that under certain circumstances, it is impossible to establish a one-to-one correspondence between them. However, using the Schur-Weyl duality theorem we show that the two types of symmetry are inherently coupled. In addition, we use the ingenious representation-theory technique of Young tableaus to represent the molecular nuclear-spin degrees of freedom in terms of well-defined mathematical objects. This simplifies the symmetry classification of the nuclear wavefunction even for large molecules. Also, the application to reactive collisions is very straightforward and provides a much simplified approach to obtaining selection rules.

  12. Unifying the rotational and permutation symmetry of nuclear spin states: Schur-Weyl duality in molecular physics.

    Science.gov (United States)

    Schmiedt, Hanno; Jensen, Per; Schlemmer, Stephan

    2016-08-21

    In modern physics and chemistry concerned with many-body systems, one of the mainstays is identical-particle-permutation symmetry. In particular, both the intra-molecular dynamics of a single molecule and the inter-molecular dynamics associated, for example, with reactive molecular collisions are strongly affected by selection rules originating in nuclear-permutation symmetry operations being applied to the total internal wavefunctions, including nuclear spin, of the molecules involved. We propose here a general tool to determine coherently the permutation symmetry and the rotational symmetry (associated with the group of arbitrary rotations of the entire molecule in space) of molecular wavefunctions, in particular the nuclear-spin functions. Thus far, these two symmetries were believed to be mutually independent and it has even been argued that under certain circumstances, it is impossible to establish a one-to-one correspondence between them. However, using the Schur-Weyl duality theorem we show that the two types of symmetry are inherently coupled. In addition, we use the ingenious representation-theory technique of Young tableaus to represent the molecular nuclear-spin degrees of freedom in terms of well-defined mathematical objects. This simplifies the symmetry classification of the nuclear wavefunction even for large molecules. Also, the application to reactive collisions is very straightforward and provides a much simplified approach to obtaining selection rules.

  13. A growth factor signaling cascade confined to circular ruffles in macrophages

    Directory of Open Access Journals (Sweden)

    Timothy P. Welliver

    2012-06-01

    The formation of macropinosomes requires large-scale movements of membranes and the actin cytoskeleton. Over several minutes, actin-rich surface ruffles transform into 1–5 µm diameter circular ruffles, which close at their distal margins, creating endocytic vesicles. Previous studies using fluorescent reporters of phosphoinositides and Rho-family GTPases showed that signals generated by macrophages in response to the growth factor Macrophage Colony-Stimulating Factor (M-CSF appeared transiently in domains of plasma membrane circumscribed by circular ruffles. To address the question of how signaling molecules are coordinated in such large domains of plasma membrane, this study analyzed the relative timing of growth factor-dependent signals as ruffles transformed into macropinosomes. Fluorescent protein chimeras expressed in macrophages were imaged by microscopy and quantified relative to circular ruffle formation and cup closure. The large size of macropinocytic cups allowed temporal resolution of the transitions in phosphoinositides and associated enzyme activities that organize cup closure. Circular ruffles contained transient and sequential spikes of phosphatidylinositol (4,5-bisphosphate (PI(4,5P2, phosphatidylinositol (3,4,5-trisphosphate (PIP3, diacylglycerol, PI(3,4P2, PI(3P and the activities of protein kinase C-α, Rac1, Ras and Rab5. The confinement of this signal cascade to circular ruffles indicated that diffusion barriers present in these transient structures focus feedback activation and deactivation of essential enzyme activities into restricted domains of plasma membrane.

  14. Circularly Polarized Persistent Room-Temperature Phosphorescence from Metal-Free Chiral Aromatics in Air.

    Science.gov (United States)

    Hirata, Shuzo; Vacha, Martin

    2016-04-21

    Circularly polarized room-temperature phosphorescence (RTP) with persistent emission characteristics was observed from metal-free chiral binaphthyl structures. Enantiomers of the binaphthyl compounds doped into an amorphous hydroxylated steroid matrix produced blue fluorescence and yellow persistent RTP in air. The lifetime and quantum yield of the yellow persistent RTP were 0.67 s and 2.3%, respectively. The dissymmetry factors of circular dichroism (CD) in the first absorption band, circularly polarized fluorescence (CPF), and circularly polarized persistent RTP were |1.1 × 10(-3)|, |4.5 × 10(-4)|, and |2.3 × 10(-3)|, respectively. A comparison between the experimental data and calculations by time-dependent density functional theory for transient CD spectra confirmed that the binaphthyl conformations in the lowest singlet excited state (S1) and the lowest triplet state (T1) were different. The large difference in the dissymmetry factors for the CPF and the circularly polarized persistent RTP was likely caused by this conformational change between S1 and T1.

  15. Fluorescent eco-particles for surface flow physics analysis

    Directory of Open Access Journals (Sweden)

    F. Tauro

    2013-03-01

    Full Text Available In this letter, we describe a novel methodology for fabricating inexpensive environmentally-friendly fluorescent microparticles for quantitative surface flow visualization. Particles are synthesized from natural white beeswax and a highly diluted solution of a nontoxic fluorescent red dye. Bead fluorescence exhibits a long lifetime in adverse conditions, such as exposure to weathering agents, and is enhanced by Ultra Violet radiation. The fluorescent eco-particles are integrated in a particle image velocimetry study of circular hydraulic jump to demonstrate their feasibility in tracing complex surface flows.

  16. Fluorescent eco-particles for surface flow physics analysis

    Science.gov (United States)

    Tauro, F.; Porfiri, M.; Grimaldi, S.

    2013-03-01

    In this letter, we describe a novel methodology for fabricating inexpensive environmentally-friendly fluorescent microparticles for quantitative surface flow visualization. Particles are synthesized from natural white beeswax and a highly diluted solution of a nontoxic fluorescent red dye. Bead fluorescence exhibits a long lifetime in adverse conditions, such as exposure to weathering agents, and is enhanced by Ultra Violet radiation. The fluorescent eco-particles are integrated in a particle image velocimetry study of circular hydraulic jump to demonstrate their feasibility in tracing complex surface flows.

  17. Attenuation in Superconducting Circular Waveguides

    Directory of Open Access Journals (Sweden)

    K. H. Yeap

    2016-09-01

    Full Text Available We present an analysis on wave propagation in superconducting circular waveguides. In order to account for the presence of quasiparticles in the intragap states of a superconductor, we employ the characteristic equation derived from the extended Mattis-Bardeen theory to compute the values of the complex conductivity. To calculate the attenuation in a circular waveguide, the tangential fields at the boundary of the wall are first matched with the electrical properties (which includes the complex conductivity of the wall material. The matching of fields with the electrical properties results in a set of transcendental equations which is able to accurately describe the propagation constant of the fields. Our results show that although the attenuation in the superconducting waveguide above cutoff (but below the gap frequency is finite, it is considerably lower than that in a normal waveguide. Above the gap frequency, however, the attenuation in the superconducting waveguide increases sharply. The attenuation eventually surpasses that in a normal waveguide. As frequency increases above the gap frequency, Cooper pairs break into quasiparticles. Hence, we attribute the sharp rise in attenuation to the increase in random collision of the quasiparticles with the lattice structure.

  18. Fluorescent microspheres

    Science.gov (United States)

    Rembaum, A.

    1978-01-01

    Latex particles with attached antibodies have potential biochemical and environmental applications. Human red blood cells and lymphocytes have been labeled with fluorescent microspheres by either direct or indirect immunological technique. Immunolatex spheres can also be used for detecting and localizing specific cell surface receptors. Hormones and toxins may also be bondable.

  19. Total positive curvature of circular DNA

    DEFF Research Database (Denmark)

    Bohr, Jakob; Olsen, Kasper Wibeck

    2013-01-01

    molecules, e.g., plasmids, it is shown to have implications for the total positive curvature integral. For small circular micro-DNAs it follows as a consequence of Fenchel's inequality that there must exist a minimum length for the circular plasmids to be double stranded. It also follows that all circular...... micro-DNAs longer than the minimum length must be concave, a result that is consistent with typical atomic force microscopy images of plasmids. Predictions for the total positive curvature of circular micro-DNAs are given as a function of length, and comparisons with circular DNAs from the literature......The properties of double-stranded DNA and other chiral molecules depend on the local geometry, i.e., on curvature and torsion, yet the paths of closed chain molecules are globally restricted by topology. When both of these characteristics are to be incorporated in the description of circular chain...

  20. Thematic Minireview Series on Circular Proteins

    OpenAIRE

    Craik, David J.; Allewell, Norma M.

    2012-01-01

    Circular proteins have now been discovered in all kingdoms of life and are characterized by their exceptional stability and the diversity of their biological activities, primarily in the realm of host defense functions. This thematic minireview series provides an overview of the distribution, evolution, activities, and biological synthesis of circular proteins. It also reviews approaches that biological chemists are taking to develop synthetic methods for making circular proteins in the labor...

  1. Computational fitness landscape for all gene-order permutations of an RNA virus.

    Directory of Open Access Journals (Sweden)

    Kwang-il Lim

    2009-02-01

    Full Text Available How does the growth of a virus depend on the linear arrangement of genes in its genome? Answering this question may enhance our basic understanding of virus evolution and advance applications of viruses as live attenuated vaccines, gene-therapy vectors, or anti-tumor therapeutics. We used a mathematical model for vesicular stomatitis virus (VSV, a prototype RNA virus that encodes five genes (N-P-M-G-L, to simulate the intracellular growth of all 120 possible gene-order variants. Simulated yields of virus infection varied by 6,000-fold and were found to be most sensitive to gene-order permutations that increased levels of the L gene transcript or reduced levels of the N gene transcript, the lowest and highest expressed genes of the wild-type virus, respectively. Effects of gene order on virus growth also depended upon the host-cell environment, reflecting different resources for protein synthesis and different cell susceptibilities to infection. Moreover, by computationally deleting intergenic attenuations, which define a key mechanism of transcriptional regulation in VSV, the variation in growth associated with the 120 gene-order variants was drastically narrowed from 6,000- to 20-fold, and many variants produced higher progeny yields than wild-type. These results suggest that regulation by intergenic attenuation preceded or co-evolved with the fixation of the wild type gene order in the evolution of VSV. In summary, our models have begun to reveal how gene functions, gene regulation, and genomic organization of viruses interact with their host environments to define processes of viral growth and evolution.

  2. Mixing in Circular and Non-circular Jets in Crossflow

    DEFF Research Database (Denmark)

    Salewski, Mirko; Stankovic, D.; Fuchs, L.

    2008-01-01

    Coherent structures and mixing in the flow field of a jet in crossflow have been studied using computational (large eddy simulation) and experimental (particle image velocimetry and laser-induced fluorescence) techniques. The mean scalar fields and turbulence statistics as determined by both...... orthogonal decomposition of the transverse velocity indicates that coherent structures may be responsible for this phenomenon. Nozzles which have a single-peaked distribution have stronger modes in transverse direction. The global mixing performance is superior for these nozzle types. This is the case...

  3. Nanofocusing in circular sector-like nanoantennas

    DEFF Research Database (Denmark)

    Zenin, Volodymyr; Pors, Anders Lambertus; Han, Zhanghua;

    2014-01-01

    a concentric circular line of phase contrast, demonstrating resonant excitation of a standing wave of counter-propagating surface plasmons, travelling between a tip and opposite circular edge of the antenna. Transmission spectra obtained in the range 900 - 2100 nm are in good agreement with numerical...

  4. Exon circularization in mammalian nuclear extracts.

    Science.gov (United States)

    Pasman, Z; Been, M D; Garcia-Blanco, M A

    1996-06-01

    Correct ligation of exons in pre-mRNA splicing requires splice site juxtaposition (splice site pairing), usually involving a 5' splice site and a downstream 3' splice site. Splicing of a 5' splice site to an upstream 3' splice site, however, is predicted to result in a circular RNA. This mode of splice site pairing across the axon has been hypothesized to account for rare RNAs containing scrambled exons (Nigro JM et al., 1991, Celt 64:607-613; Cocquerelle C et al., 1992, EMBO J 11:1 095-1098). Additionally, this mode of splice site pairing has been postulated to explain the formation of SRY circular transcripts in mouse testis (Capel B et al., 1993, Celt 73:1019- 1030). Here we show that splice site pairing across the exon can result in exon circularization in vitro. These results indicate that spliceosome-mediated axon circularization indeed can account for the formation of scrambled exons and circular RNAs. Exon circularization efficiency decreased dramatically as the length of the exon was increased from 95 nt to 274 nt. Circularization of this longer exon was restored, however, when intronic complementary sequences were included in the RNA substrate. These complementary sequences could form a stem that served to bring the splice sites into proximity and thereby promote splice site pairing. Therefore, the splicing of this structured RNA recapitulated SRY-like exon circularization in vitro.

  5. 21 CFR 606.122 - Instruction circular.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 7 2010-04-01 2010-04-01 false Instruction circular. 606.122 Section 606.122 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) BIOLOGICS CURRENT GOOD MANUFACTURING PRACTICE FOR BLOOD AND BLOOD COMPONENTS Finished Product Control § 606.122 Instruction circular. An instruction...

  6. CIRCULAR ECONOMY IN ROMANIA WITHIN EUROPEAN CONTEXT

    Directory of Open Access Journals (Sweden)

    Cornelia Marcela Danu

    2015-07-01

    Full Text Available In the present paper we have approached some conceptual and coordinated marks of the societal reality connected to the circular economy. Generated by „the limits of certainty” regarding the future of the world business, the operationalization of the circular economy has become a part of the EU strategies and started the various stages of implementation as an active process in all countries. We have highlighted the opportunities and the risks related to the circular economy, the European dimension and, in particular, the Romanian one of this process, the role of the triad: consumer-company-natural environment, while implementing the circular economy. Circular economy is both a new approach of the societal life, based on changing the mentalities of the individuals having the role of decision makers at the company level and public administration and the decision makers – consumers, as well as a policy meant to be made operational across all entities: governmental, entrepreneurial, individually – human.

  7. Circular motion in NUT space-time

    CERN Document Server

    Jefremov, Paul

    2016-01-01

    We consider circular motion in the NUT (Newman-Unti-Tamburino) space-time. Among other things, we determine the location of circular time-like geodesic orbits, in particular of the innermost stable circular orbit (ISCO) and of the marginally bound circular orbit. Moreover, we discuss the von Zeipel cylinders with respect to the stationary observers and with respect to the Zero Angular Momentum Observers (ZAMOs). We also investigate the relation of von Zeipel cylinders to inertial forces, in particular in the ultra-relativistic limit. Finally, we generalise the construction of thick accretion tori ("Polish doughnuts") which are well known on the Schwarzschild or Kerr background to the case of the NUT metric. We argue that, in principle, a NUT source could be distinguished from a Schwarzschild or Kerr source by observing the features of circular matter flows in its neighbourhood.

  8. A proof of maximum contention-free property of interleavers for Turbo codes using permutation polynomials over integer rings

    Institute of Scientific and Technical Information of China (English)

    MA Xin-rui; XU You-yun; ZHANG Le

    2007-01-01

    It is well known that interleavers play a critical role in Turbo coding/decoding schemes, and contention-free interleaver design has become a serious problem in the parallelization of Turbo decoding, which is indispensable to meet the demands for high throughput and low latency in next generation mobile communication systems. This paper unveils the fact that interleavers based on permutation polynomials modulo N are contention-free for every window size W, a factor of the interleaver length N, which, also called maximum contention-free interleavers.

  9. Encryption using circular harmonic key

    Directory of Open Access Journals (Sweden)

    Jorge Enrique Rueda-Parada

    2015-01-01

    Full Text Available En este trabajo presento un estudio sobre la varianza a la rota ción de la llave del procesador de encriptación basado en la tr ansformada de Fourier. Determiné que la llave en coordenadas rectangulares pe rmite un nivel de tolerancia inferior a 0.2 grados de rotación de la llave en el proceso de decriptación. Entonces la solución es construir la llave en coordenadas polares, por medio de una expansión en armónicos circulares. De esta manera, el umbral de tolerancia a umenta aproximadamente hasta 40 grados de rotación de la llave en el proceso de decriptación. Esta solución es un valor agregado par a el procesador de encriptación óptico. He desarrollado una her ramienta computacional para las simulaciones y resultados obtenidos en e ste estudio.

  10. Process engineering in circular economy

    Institute of Scientific and Technical Information of China (English)

    Lothar Reh

    2013-01-01

    Driven by increasing global population and by growing demand for individual wealth,the consumption of energy and raw materials as well as the steadily growing CO2 concentration in atmosphere pose great challenges to process engineering.This complex multi-scale discipline deals with the transformation of mass by energy to manifold products in different industrial fields under economical and ecological sustainable conditions.In growing circular economy,process engineering increasingly plays an important role in recovering valuable components from very diffuse material flows leaving the user stocks following widely variable time periods of use.As well it is engaged in thermal recovery of energy therefrom and in environmentally safe disposal of residual solid wastes whose recovery economically is not feasible.An efficient recovery of materials and energy following the laws of entropy is a must.A complex network of mass,energy,transportation and information flows has to be regarded with growing traded quantities of used goods even on global level.Important constraints in time,however,exist for a necessary realization of innovative new processes and communal mobility and industrial infrastructure on medium and large scale.Based on reasonable long term and highly reliable statistics from industrial organizations representing steel and paper industry,some limits and trends of possible developments in processing of those industries with long recycling experience will be discussed.

  11. Visualizing Single-molecule DNA Replication with Fluorescence Microscopy

    NARCIS (Netherlands)

    Tanner, Nathan A.; Loparo, Joseph J.; Oijen, Antoine M. van

    2009-01-01

    We describe a simple fluorescence microscopy-based real-time method for observing DNA replication at the single-molecule level. A circular, forked DNA template is attached to a functionalized glass coverslip and replicated extensively after introduction of replication proteins and nucleotides. The g

  12. Polarimetric investigation of materials with both linear and circular anisotropy

    DEFF Research Database (Denmark)

    Naydenova, I.; Nikolova, L.; Todorov, T.;

    1997-01-01

    We investigate light propagation through materials with both linear and circular anisotropy and find the relation of the amplitude and polarization transfer functions to the four anisotropic characteristics: linear circular birefringence, and linear and circular dichroism. We determine these four...

  13. Uniformity Tests in Circular Data: Review

    Directory of Open Access Journals (Sweden)

    Ismet DOGAN

    2015-10-01

    Full Text Available Circular data are a large class of directional data, which are interest in many fields. Examples include phenomena that are periodic in time, including those dependent on hours of the day (hospital visits, times of birth, etc. or days of the year (unemployment or sales variations. The elementary but also fundamental property of circular data is that the beginning and end of the scale coincide: for example, 0° = 360°. An immediate implication is that the arithmetic mean is likely to be a poor summary: the mean of 1° and 359° cannot sensibly be 180°. The solution is use the vector mean direction as circular mean. The statistical analysis of angular or circular data differs from the analysis of linear data. Unlike linear distributions, which are often two-tailed and infinite, circular distributions exhibit finite closure because a circular data set comes back on itself, and therefore, 0° and 360° are actually the same point on a circle. Circular statistics is concerned mainly with observations which are unit vectors in the plane. Thus the sample space is typically a circle or a sphere, so that standart methods for analysing univariate or multivariate measurement data can?t be used. Special circular methods are required take into account the structure of these sample spaces. In most circular statistical analyses, the null hypothesis is a uniform distribution in which all directions occur with equal probability. In this study, eight different testing methods improved for uniformity in angular data have been introduced and these methods were compared with each other by using the information obtained from the literature.

  14. Helicity, assembly, and circularly polarised luminesence of chiral AIEgens

    Science.gov (United States)

    Li, Hongkun; Li, Bing Shi; Tang, Ben Zhong

    2016-09-01

    As opposed to most fluorophores that suffer from aggregation-caused quenching (ACQ), aggregation-induced emissive luminogens (AIEgens) possess very weak fluorescence in solution, but show strong emission upon aggregation due to restriction of intramolecular motion (RIM). Since AIEgens are often comprised of propeller-shaped structures, i.e. polyphenylsiloles or tetraphenylethylene (TPE), the attachment of chiral units has recently proven a powerful tool to fabricate chiral AIEgens exhibiting strong circularly-polarized luminescence (CPL) signal upon aggregation. Different chiral moieties lead to various assembled structures, such as helical nanoribbons, superhelical ropes, hollow and solid micro-/nanospheres. Generally, these structures exhibit enhanced chiroptical properties when compared to their monomeric counterpart. In this context, we report on the tetraphenylsilole and TPE derivatives with side-chains bearing an enantiomerically pure chiral units readily assembled into superhelical ropes upon aggregation, which displayed large CPL dissymmetry factors (gem) of -0.32 - a record for purely organic chiral materials.

  15. Circular polarization memory in polydisperse scattering media

    CERN Document Server

    Macdonald, Callum M; Meglinski, Igor

    2015-01-01

    We investigate the survival of circularly polarized light in random scattering media. The surprising persistence of this form of polarization has a known dependence on the size and refractive index of scattering particles, however a general description regarding polydisperse media is lacking. Through analysis of Mie theory, we present a means of calculating the magnitude of circular polarization memory in complex media, with total generality in the distribution of particle sizes and refractive indices. Quantification of this memory effect enables an alternate pathway towards recovering particle size distribution, based on measurements of diffusing circularly polarized light.

  16. How to view an MCMC simulation as a permutation, with applications to parallel simulation and improved importance sampling

    CERN Document Server

    Neal, Radford M

    2012-01-01

    Consider a Markov chain defined on a finite state space, X, that leaves invariant the uniform distribution on X, and whose transition probabilities are integer multiples of 1/Q, for some integer Q. I show how a simulation of n transitions of this chain starting at x_0 can be viewed as applying a random permutation on the space XxU, where U={0,1,...,Q-1}, to the start state (x_0,u_0), with u_0 drawn uniformly from U. This result can be applied to a non-uniform distribution with probabilities that are integer multiples of 1/P, for some integer P, by representing it as the marginal distribution for X from the uniform distribution on a suitably-defined subset of XxY, where Y={0,1,...,P-1}. By letting Q, P, and the cardinality of X go to infinity, this result can be generalized to non-rational probabilities and to continuous state spaces, with permutations on a finite space replaced by volume-preserving one-to-one maps from a continuous space to itself. These constructions can be efficiently implemented for chains...

  17. A permutation decision making method with multiple weighting vectors of criteria using NSGA-II and MOPSO

    Directory of Open Access Journals (Sweden)

    Mahdi Bashiri

    2014-04-01

    Full Text Available In decision making when multiple criteria are determined, the best choice depends on having complete information and proper decision-making technique. The permutation method is one of the popular techniques used in the context of multiple criteria decision making (MCDM. In this paper, a method is presented where there is more than one vector of weights for the criteria and there are uncertainties associated with criteria weights or there are multiple decision makers. We first take different weight vectors to create a multi-objective problem and then we solve them simultaneously to achieve appropriate Pareto solutions of the permutation method. Therefore, MOPSO and NSGA-II algorithms are utilized to find non-dominated solutions. Some examples in different sizes are considered to compare the efficiency of the proposed methods. Results show that by increasing the number of options and considering the computational time, the proposed methods perform better compared with the exact method. Moreover, NSGA-II is more efficient than MOPSO for the considered problem.

  18. Polarisation vision: beetles see circularly polarised light.

    Science.gov (United States)

    Warrant, Eric J

    2010-07-27

    It has long been known that the iridescent cuticle of many scarab beetles reflects circularly polarised light. It now turns out that scarabs can also see this light, potentially using it as a covert visual signal.

  19. NMFS Scientific Publications Office: Legacy Series: Circulars

    Science.gov (United States)

    ... Research related to the case for abstention, ... The Colorado River-Matagorda Bay study, by Charles H. Koski, p. 70-74; Movement of water masses ... Circular 191. Extent of acid mine pollution ...

  20. Unleashing the Power of the Circular Economy

    Energy Technology Data Exchange (ETDEWEB)

    Kok, L.; Wurpel, G.; Ten Wolde, A. [IMSA Amsterdam, Amsterdam (Netherlands)

    2013-04-15

    The concept of circular economy is an economic and industrial system that focuses on the reusability of products and raw materials, reduces value destruction in the overall system and aims at value creation within each tier of the system. This report for Circle Economy (CE) outlines the general direction and concrete steps that must be taken to accomplish a breakthrough to a circular economy. It also provides a knowledge base behind the concept, connecting it to sustainability.

  1. A Conceptual Framework for Circular Design

    Directory of Open Access Journals (Sweden)

    Mariale Moreno

    2016-09-01

    Full Text Available Design has been recognised in the literature as a catalyst to move away from the traditional model of take-make-dispose to achieve a more restorative, regenerative and circular economy. As such, for a circular economy to thrive, products need to be designed for closed loops, as well as be adapted to generate revenues. This should not only be at the point of purchase, but also during use, and be supported by low-cost return chains and reprocessing structures, as well as effective policy and regulation. To date, most academic and grey literature on the circular economy has focused primarily on the development of new business models, with some of the latter studies addressing design strategies for a circular economy, specifically in the area of resource cycles and design for product life extension. However, these studies primarily consider a limited spectrum of the technical and biological cycles where materials are recovered and restored and nutrients (e.g., materials, energy, water are regenerated. This provides little guidance or clarity for designers wishing to design for new circular business models in practice. As such, this paper aims to address this gap by systematically analysing previous literature on Design for Sustainability (DfX (e.g., design for resource conservation, design for slowing resource loops and whole systems design and links these approaches to the current literature on circular business models. A conceptual framework is developed for circular economy design strategies. From this conceptual framework, recommendations are made to enable designers to fully consider the holistic implications for design within a circular economy.

  2. Construction of Circular Economy Industrial System

    Institute of Scientific and Technical Information of China (English)

    Cao Man; Ye Wenhu

    2007-01-01

    It is difficult to realize the transformation from traditional economy industrial system to circular economy industrial system.Regarding primary raw materials as the indicators,the industrial system has been specified according to the divergence among the indicators and the circular utilization modes.In comparison with the association among industrial systems,the relationship among industrial sub-systems is named as industrial cross-linking in this paper.The industrial system which could completely utilize and recycle the indicators should be increased and strengthened,and the circular economy industrial system with complete industrial association and industrial cross-linking should also be constructed.Taking the development of circular agricultural system basing on the traditional agricultural system as an example,the traditional agricultural products are regarded as the indicators which have been divided into foodstuff and crop straws which are used to produce food and articlesfor use,like fertilizer,energy and papers etc.The way to construct the circular agricultural industrial system is to increase the industrial systems that could utilize the products generated from crop straws,feces and other castoffs and transform the wastewater and other trucks into environmental friendly products.It has also been pointed out that the construction of circular economy industrial system is conducive to the foundation of circular industrial economics and the establishment of the construction layout of circular economy and the application schemes.Suggestions to the theoretical and practical work of the next step have also been brought forward in this paper.

  3. Laminar circular hydraulic jumps without separation

    Science.gov (United States)

    Dasgupta, Ratul; Tomar, Gaurav; Govindarajan, Rama

    2009-11-01

    The traditional inviscid criterion for the occurrence of a planar, standing hydraulic jump is to have the Froude number decrease downstream and go through a value of 1 at some location. Here, upstream propagating, small-amplitude, long, non-dispersive gravity waves are trapped, and non-linear steepening is said to result in a near-discontinuous height profile, but it is not clear how. Such a condition on the Froude number is shown in the present axisymmetric Navier-Stokes computations to hold for a circular jump as well. The relevance of non-linear steepening to a circular jump is therefore a question we wish to answer. In circular jumps, moreover, a region of recirculation is usually observed underneath the jump, underlining the importance of viscosity in this process. This led Tani (J. Phys. Soc. Japan, 1949) to hypothesise that boundary-layer separation was the cause of the circular jump. This hypothesis has been debated extensively and the possibility of circular jumps without separation hinted at. In our simulations, we are able to obtain circular hydraulic jumps without any flow separation. This, and the necessity or otherwise of viscosity in jump formation will be discussed.

  4. PLANAR MOTION OF A SLIGHTLY DISTORTED CIRCULAR CYLINDER AROUND ANOTHER CIRCULAR ONE

    Institute of Scientific and Technical Information of China (English)

    SUN Ren; CHWANG Allen T.

    2004-01-01

    Accurate prediction of the motion of a body moving around another one in an unbounded fluid and determi-nation of the hydrodynamic interaction between them are im-portant in the coastal and offshore engineering. For two-dimensional cases, most of the previous studies were focused on the interaction between circular cylinders without considering the non-circular situation. To break through the limitation of"circular" bodies, in the present paper the boundary perturbation method was employed to investigate the motion of a slightly distorted circular cylinder around a circular one. An approximate complex velocity potential in terms of double infinite series expanded at two singular points was derived using the method of continued fractions. The hydrodynamic interaction between two cylinders was computed by solving the dynamical equations of motion. In a relative coordinate system moving with the uniform stream, the kinetic energy of the fluid was expressed as a function of fifteen added masses. Approximate analytical solutions of added masses in the series form were obtained and applied to determine the trajectories of the slightly distorted circular cylinder around a fixed circular one. Numerical results show that the presence of the circular cylinder affects the planar motion of the slightly distorted cirular cylinder and the initial configuration of the slightly distorted circular cylinder has a decisive influence on the development of its rotational motion.

  5. OPERATIONAL CIRCULAR NO 6 - JUNE 2001 'CERN SCIENTIFIC DOCUMENTS'

    CERN Multimedia

    Human Resources Division

    2001-01-01

    This new operational circular has been drawn up. It cancels and replaces Administrative Circular N° 29 entitled "Principles and procedures governing CERN publications and reports and other publications arising from CERN work". Copies are available from Divisional Secretariats. Note : Administrative and operational circulars, as well as the lists of those in force, are available for consultation on WWW : ADMINISTRATIVE CIRCULARSOPERATIONAL CIRCULARS

  6. Researches on Relationship between Circular Agriculture and Industrial Diversity

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    First, this paper establishes the conceptual model of circular agriculture, conducts systematic analysis on the circular agriculture on the basis of conceptual model, and discusses the characteristics of closeness and openness of circular agriculture and relationship between closeness and openness of circular agriculture. Second, this paper introduces the industrial diversity related to circular agriculture, defines the concept of industry and the concept of industries related to agriculture, and illustrates the related industries that are conducive to circular agriculture and the related industries that are not conducive to circular agriculture. Finally, this paper analyzes the mutual relationship between circular agriculture and industrial diversity as follows: in the system of circular agriculture, the industrial diversity can transform the wastes in upstream industries into resources in downstream industries; the industrial diversity creates possibility for recycling of agricultural byproducts; the industrial diversity is conducive to the diversification of industries related to circular agriculture.

  7. Revisiting the NEH algorithm- the power of job insertion technique for optimizing the makespan in permutation flow shop scheduling

    Directory of Open Access Journals (Sweden)

    A. Baskar

    2016-04-01

    Full Text Available Permutation flow shop scheduling problems have been an interesting area of research for over six decades. Out of the several parameters, minimization of makespan has been studied much over the years. The problems are widely regarded as NP-Complete if the number of machines is more than three. As the computation time grows exponentially with respect to the problem size, heuristics and meta-heuristics have been proposed by many authors that give reasonably accurate and acceptable results. The NEH algorithm proposed in 1983 is still considered as one of the best simple, constructive heuristics for the minimization of makespan. This paper analyses the powerful job insertion technique used by NEH algorithm and proposes seven new variants, the complexity level remains same. 120 numbers of problem instances proposed by Taillard have been used for the purpose of validating the algorithms. Out of the seven, three produce better results than the original NEH algorithm.

  8. Circular design - A manual on how to integrate circular design in buildings

    NARCIS (Netherlands)

    Mac-lean, M.; Van Splunter, M.; Sun, X.

    2014-01-01

    This "designers' manual" is made during the TIDO-course AR0531 Innovation and Sustainability Circular design is based on two sustainability concepts: Cradle to Cradle® and circular economy. The former is more dogmatic and specific for the manufacturing and design industry, while the latter presents

  9. Bright circularly polarized soft X-ray high harmonics for X-ray magnetic circular dichroism.

    Science.gov (United States)

    Fan, Tingting; Grychtol, Patrik; Knut, Ronny; Hernández-García, Carlos; Hickstein, Daniel D; Zusin, Dmitriy; Gentry, Christian; Dollar, Franklin J; Mancuso, Christopher A; Hogle, Craig W; Kfir, Ofer; Legut, Dominik; Carva, Karel; Ellis, Jennifer L; Dorney, Kevin M; Chen, Cong; Shpyrko, Oleg G; Fullerton, Eric E; Cohen, Oren; Oppeneer, Peter M; Milošević, Dejan B; Becker, Andreas; Jaroń-Becker, Agnieszka A; Popmintchev, Tenio; Murnane, Margaret M; Kapteyn, Henry C

    2015-11-17

    We demonstrate, to our knowledge, the first bright circularly polarized high-harmonic beams in the soft X-ray region of the electromagnetic spectrum, and use them to implement X-ray magnetic circular dichroism measurements in a tabletop-scale setup. Using counterrotating circularly polarized laser fields at 1.3 and 0.79 µm, we generate circularly polarized harmonics with photon energies exceeding 160 eV. The harmonic spectra emerge as a sequence of closely spaced pairs of left and right circularly polarized peaks, with energies determined by conservation of energy and spin angular momentum. We explain the single-atom and macroscopic physics by identifying the dominant electron quantum trajectories and optimal phase-matching conditions. The first advanced phase-matched propagation simulations for circularly polarized harmonics reveal the influence of the finite phase-matching temporal window on the spectrum, as well as the unique polarization-shaped attosecond pulse train. Finally, we use, to our knowledge, the first tabletop X-ray magnetic circular dichroism measurements at the N4,5 absorption edges of Gd to validate the high degree of circularity, brightness, and stability of this light source. These results demonstrate the feasibility of manipulating the polarization, spectrum, and temporal shape of high harmonics in the soft X-ray region by manipulating the driving laser waveform.

  10. Environmental issues elimination through circular economy

    Science.gov (United States)

    Špirková, M.; Pokorná, E.; Šujanová, J.; Samáková, J.

    2016-04-01

    Environmental efforts of European Union are currently going towards circular economy. Tools like Extended Producer Responsibility and Eco-design were established. The circular economy deals with resources availability issue on one hand and waste management on the other hand. There are few pioneering companies all over the world with some kind of circular economy practice. Generally the concept is not very wide-spread. The paper aims to evaluate possibility of transition towards circular economy in Slovak industrial companies. They need to have an active approach to material treatment of their products after usage stage. Innovation is another important pre-condition for the transition. Main problem of current cradle to grave system is landfilling of valuable materials after one cycle of usage. Their potential value for next manufacturing cycles is lost. Companies may do not see connection between waste management and material resource prices and volatility of supplies. Municipalities are responsible for municipal waste collection and treatment in Slovakia. The circular economy operates by cradle to cradle principle. Company manages material flow until the material comes back to the beginning of manufacturing process by itself or by another partners. Stable material supplies with quite low costs are provided this way. It is necessary to deal with environmental problems in phase of product design. Questionnaire survey results show on one hand low involvement of industrial companies in waste management area, however on the other hand they are open to environmental innovations in future.

  11. A COMPACT CIRCULARLY POLARIZED SLOTTED MICROSTRIP ANTENNA

    Directory of Open Access Journals (Sweden)

    V. Jebaraj

    2014-12-01

    Full Text Available Slot antennas are often used at UHF and microwave frequencies. In slot antenna for RFID reader applications the frequency ranges from 902-923MHz to achieve circular polarization. The shapes and size of the slot, as well as the driving frequency, determine the radiation distribution pattern. The proposed compact size circularly polarized slotted microstrip antenna are summarized with design rules. The circularly polarized radiation in square patch antenna can be obtained by perturbation technique with different shapes of slot in the orthogonal direction. A single feed configuration based symmetric slotted microstrip antenna is adapted to realize the compact circularly polarized microstrip antennas. Based on the perimeter, the size of the slot on microstrip slot antenna are studied and compared. The Operating frequency of the antenna is 912MHz that can be tuned by varying the perimeter of the slot while the keeping the circularly polarized radiation unchanged. The schematic and layout are configured by using Advanced Design System (ADS. Return loss, Resonant Frequency, Axial Ratio (AR, and Gain were determined for the proposed system using ADS. A measured 3dB Axial Ratio (AR bandwidth around 6MHz with 16MHz impedance bandwidth has been achieved for the antenna on a RO3004C substrate with dielectric constant 3.38.

  12. Circular and Elliptic Submerged Impinging Water Jets

    Science.gov (United States)

    Claudey, Eric; Benedicto, Olivier; Ravier, Emmanuel; Gutmark, Ephraim

    1999-11-01

    Experiments and CFD have been performed to study circular and elliptic jets in a submerged water jet facility. The tests included discharge coefficient measurement to evaluate pressure losses encountered in noncircular nozzles compared to circular ones. Three-dimensional pressure mappings on the impingement surface and PIV measurement of the jet mean and turbulent velocity have been performed at different compound impingement angles relative to the impingement surface and at different stand-off distances. The objective was to investigate the effect of the non-circular geometry on the flow field and on the impact region. The tests were performed in a close loop system in which the water was pumped through the nozzles into a clear Plexiglas tank. The Reynolds numbers were typically in the range of 250000. Discharge coefficients of the elliptic nozzle was somewhat lower than that of the circular jet but spreading rate and turbulence level were higher. Pressure mapping showed that the nozzle exit geometry had an effect on the pressure distribution in the impact region and that high-pressure zones were generated at specific impact points. PIV measurements showed that for a same total exit area, the elliptic jets affected a surface area that is 8the equivalent circular. The turbulence level in the elliptic jet tripled due to the nozzle design. Results of the CFD model were in good agreement with the experimental data.

  13. A broadband, circular-polarization selective surface

    Science.gov (United States)

    Momeni Hasan Abadi, Seyed Mohamad Amin; Behdad, Nader

    2016-06-01

    We introduce a new technique for designing wideband circular-polarization selective surfaces (CPSSs) based on anisotropic miniaturized element frequency selective surfaces. The proposed structure is a combination of two linear-to-circular polarization converters sandwiching a linear polarizer. This CPSS consists of a number of metallic layers separated from each other by thin dielectric substrates. The metallic layers are in the form of two-dimensional arrays of subwavelength capacitive patches and inductive wire grids with asymmetric dimensions and a wire grid polarizer with sub-wavelength period. The proposed device is designed to offer a wideband circular-polarization selection capability allowing waves with left-hand circular polarization to pass through while rejecting those having right-hand circular polarization. A synthesis procedure is developed that can be used to design the proposed CPSS based on its desired band of operation. Using this procedure, a prototype of the proposed CPSS operating in the 12-18 GHz is designed. Full-wave electromagnetic simulations are used to predict the response of this structure. These simulation results confirm the validity of the proposed design concept and synthesis procedure and show that proposed CPSS operates within a fractional bandwidth of 40% with a co-polarization transmission discrimination of more than 15 dB. Furthermore, the proposed design is shown to be capable of providing an extremely wide field of view of ±60°.

  14. Best Practice Examples of Circular Business Models

    DEFF Research Database (Denmark)

    Guldmann, Eva

    are tightly closed, whereas in other cases they are more open due to initiatives being voluntary, experimental or small scale, covering only part of the market. The study indicates that the ability of companies to apply life cycle thinking, which involves the entire value chain from sourcing to disposal...... are different, circular business models can be found in both. These models operate in both young and mature firms, small and large, which points to the fact that circular business models can be successfully implemented in a wide range of business settings as long as they are individually tailored to each...... companies are found to apply a step-by-step or experimental strategy, where they test the resilience of a circular business model within a limited number of product lines or in one business unit at a time. This allows for a corresponding step-by-step organisational learning and for leveraging the risk...

  15. Analytical Optimization of Piezoelectric Circular Diaphragm Generator

    Directory of Open Access Journals (Sweden)

    S. Mohammadi

    2013-01-01

    Full Text Available This paper presents an analytical study of the piezoelectric circular diaphragm microgenerator using strain energy method. Piezoelectrics are the intelligent materials that can be used as transducer to convert mechanical energy into electrical energy and vice versa. The aim of this paper is to optimize produced electrical energy from mechanical pressure. Therefore, the circular metal plate equipped with piezoelectric circular patch has been considered with simply and clamped supports. A comprehensive modeling, parametrical study and the effect of the boundary conditions on the performance of the microgenerator have been investigated. The system is under variable pressure from an oscillating pressure source. Results are presented for PZT and PMN-PT piezoelectric materials with steel and aluminum substrates. An optimal value for the radius and thickness of the piezoelectric layer with a special support condition has been obtained.

  16. Experimental evidence for circular inference in schizophrenia

    Science.gov (United States)

    Jardri, Renaud; Duverne, Sandrine; Litvinova, Alexandra S.; Denève, Sophie

    2017-01-01

    Schizophrenia (SCZ) is a complex mental disorder that may result in some combination of hallucinations, delusions and disorganized thinking. Here SCZ patients and healthy controls (CTLs) report their level of confidence on a forced-choice task that manipulated the strength of sensory evidence and prior information. Neither group's responses can be explained by simple Bayesian inference. Rather, individual responses are best captured by a model with different degrees of circular inference. Circular inference refers to a corruption of sensory data by prior information and vice versa, leading us to `see what we expect' (through descending loops), to `expect what we see' (through ascending loops) or both. Ascending loops are stronger for SCZ than CTLs and correlate with the severity of positive symptoms. Descending loops correlate with the severity of negative symptoms. Both loops correlate with disorganized symptoms. The findings suggest that circular inference might mediate the clinical manifestations of SCZ.

  17. Chaotic Motion of Corrugated Circular Plates

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Large deflection theory of thin anisotropic circular plates was used to analyze the bifurcation behavior and chaotic phenomena of a corrugated thin circular plate with combined transverse periodic excitation and an in-plane static boundary load. The nonlinear dynamic equation for the corrugated plate was derived by employing Galerkin's technique. The critical conditions for occurrence of the homoclinic and subharmonic bifurcations as well as chaos were studied theoretically using the Melnikov function method. The chaotic motion was also simulated numerically using Maple, with the Poincaré map and phase curve used to evaluate when chaotic motion appears. The results indicate some chaotic motion in the corrugated plate. The method is directly applicable to chaotic analysis of an isotropic circular plate.

  18. Charged Particle Optics in Circular Higgs Factory

    Energy Technology Data Exchange (ETDEWEB)

    Cai, Yunhai [SLAC National Accelerator Lab., Menlo Park, CA (United States)

    2015-02-26

    Similar to a super B-factory, a circular Higgs factory will require strong focusing systems near the interaction points and a low-emittance lattice in arcs to achieve a factory luminosity. At electron beam energy of 120 GeV, beamstrahlung effects during the collision pose an additional challenge to the collider design. In particular, a large momentum acceptance at 2 percent level is necessary to retain an adequate beam lifetime. This turns out to be the most challenging aspect in the design of circular Higgs factory. In this paper, an example will be provided to illustrate the beam dynamics in circular Higgs factory, emphasizing on the chromatic optics. Basic optical modules and advanced analysis will be presented. Most important, we will show that 2% momentum aperture is achievable

  19. Circular object recognition based on shape parameters

    Institute of Scientific and Technical Information of China (English)

    Chen Aijun; Li Jinzong; Zhu Bing

    2007-01-01

    To recognize circular objects rapidly in satellite remote sensing imagery, an approach using their geometry properties is presented.The original image is segmented to be a binary one by one dimension maximum entropy threshold algorithm and the binary image is labeled with an algorithm based on recursion technique.Then, shape parameters of all labeled regions are calculated and those regions with shape parameters satisfying certain conditions are recognized as circular objects.The algorithm is described in detail, and comparison experiments with the randomized Hough transformation (RHT) are also provided.The experimental results on synthetic images and real images show that the proposed method has the merits of fast recognition rate, high recognition efficiency and the ability of anti-noise and anti-jamming.In addition, the method performs well when some circular objects are little deformed and partly misshapen.

  20. Wood Crosscutting Process Analysis for Circular Saws

    Directory of Open Access Journals (Sweden)

    Jozef Krilek

    2016-11-01

    Full Text Available This article deals with the influence of some cutting parameters (geometry of cutting edge, wood species, and circular saw type and cutting conditions on the wood crosscutting process carried out with circular saws. The establishment of torque values and feeding power for the crosswise wood cutting process has significant implications for designers of crosscutting lines. The conditions of the experiments are similar to the working conditions of real machines, and the results of individual experiments can be compared with the results obtained via similar experimental workstations. Knowledge of the wood crosscutting process, as well as the choice of suitable cutting conditions and tools could decrease wood production costs and save energy. Changing circular saw type was found to have the biggest influence on cutting power of all factors tested.

  1. Circular bacteriocins: biosynthesis and mode of action.

    Science.gov (United States)

    Gabrielsen, Christina; Brede, Dag A; Nes, Ingolf F; Diep, Dzung B

    2014-11-01

    Circular bacteriocins are a group of N-to-C-terminally linked antimicrobial peptides, produced by Gram-positive bacteria of the phylum Firmicutes. Circular bacteriocins generally exhibit broad-spectrum antimicrobial activity, including against common food-borne pathogens, such as Clostridium and Listeria spp. These peptides are further known for their high pH and thermal stability, as well as for resistance to many proteolytic enzymes, properties which make this group of bacteriocins highly promising for potential industrial applications and their biosynthesis of particular interest as a possible model system for the synthesis of highly stable bioactive peptides. In this review, we summarize the current knowledge on this group of bacteriocins, with emphasis on the recent progress in understanding circular bacteriocin genetics, biosynthesis, and mode of action; in addition, we highlight the current challenges and future perspectives for the application of these peptides.

  2. Structure and genetics of circular bacteriocins.

    Science.gov (United States)

    van Belkum, Marco J; Martin-Visscher, Leah A; Vederas, John C

    2011-08-01

    Circular bacteriocins are antimicrobial peptides produced by a variety of Gram-positive bacteria. They are part of a growing family of ribosomally synthesized peptides with a head-to-tail cyclization of their backbone that are found in mammals, plants, fungi and bacteria and are exceptionally stable. These bacteriocins permeabilize the membrane of sensitive bacteria, causing loss of ions and dissipation of the membrane potential. Most circular bacteriocins probably adopt a common 3D structure consisting of four or five α-helices encompassing a hydrophobic core. This review compares the various structures, as well as the gene clusters that encode circular bacteriocins, and discusses the biogenesis of this unique class of bacteriocins.

  3. Response-Adaptive Allocation for Circular Data.

    Science.gov (United States)

    Biswas, Atanu; Dutta, Somak; Laha, Arnab Kumar; Bakshi, Partho K

    2015-01-01

    Response-adaptive designs are used in phase III clinical trials to allocate a larger proportion of patients to the better treatment. Circular data is a natural outcome in many clinical trial setup, e.g., some measurements in opthalmologic studies, degrees of rotation of hand or waist, etc. There is no available work on response-adaptive designs for circular data. With reference to a dataset on cataract surgery we provide some response-adaptive designs where the responses are of circular nature and propose some test statistics for treatment comparison under adaptive data allocation procedure. Detailed simulation study and the analysis of the dataset, including redesigning the cataract surgery data, are carried out.

  4. MCPerm: a Monte Carlo permutation method for accurately correcting the multiple testing in a meta-analysis of genetic association studies.

    Directory of Open Access Journals (Sweden)

    Yongshuai Jiang

    Full Text Available Traditional permutation (TradPerm tests are usually considered the gold standard for multiple testing corrections. However, they can be difficult to complete for the meta-analyses of genetic association studies based on multiple single nucleotide polymorphism loci as they depend on individual-level genotype and phenotype data to perform random shuffles, which are not easy to obtain. Most meta-analyses have therefore been performed using summary statistics from previously published studies. To carry out a permutation using only genotype counts without changing the size of the TradPerm P-value, we developed a Monte Carlo permutation (MCPerm method. First, for each study included in the meta-analysis, we used a two-step hypergeometric distribution to generate a random number of genotypes in cases and controls. We then carried out a meta-analysis using these random genotype data. Finally, we obtained the corrected permutation P-value of the meta-analysis by repeating the entire process N times. We used five real datasets and five simulation datasets to evaluate the MCPerm method and our results showed the following: (1 MCPerm requires only the summary statistics of the genotype, without the need for individual-level data; (2 Genotype counts generated by our two-step hypergeometric distributions had the same distributions as genotype counts generated by shuffling; (3 MCPerm had almost exactly the same permutation P-values as TradPerm (r = 0.999; P<2.2e-16; (4 The calculation speed of MCPerm is much faster than that of TradPerm. In summary, MCPerm appears to be a viable alternative to TradPerm, and we have developed it as a freely available R package at CRAN: http://cran.r-project.org/web/packages/MCPerm/index.html.

  5. Free vibrations of circular cylindrical shells

    CERN Document Server

    Armenàkas, Anthony E; Herrmann, George

    1969-01-01

    Free Vibrations of Circular Cylindrical Shells deals with thin-walled structures that undergo dynamic loads application, thereby resulting in some vibrations. Part I discusses the treatment of problems associated with the propagation of plane harmonic waves in a hollow circular cylinder. In such search for solutions, the text employs the framework of the three-dimensional theory of elasticity. The text explains the use of tables of natural frequencies and graphs of representative mode shapes of harmonic elastic waves bounding in an infinitely long isotropic hollow cylinder. The tables are

  6. Circular economy in China and recommendations

    Institute of Scientific and Technical Information of China (English)

    Zhou Hongchun

    2006-01-01

    @@ It is an overall, urgent and long-term strategic task for China to vigorously develop the circular economy and build a resource-saving and environmental-friendly society. China is now at the accelerating stage of industrialization and urbanization.Lower per-capita resource amount and tendency of environmental deterioration has not been fundamentally averted. Therefore a circular economy development is an inevitable choice to realize the goal of building a well-off society, ensure sustainable development of national economy, and coordinate the relationship between mankind and nature.

  7. Rectangular-to-circular groove waveguide junction

    Institute of Scientific and Technical Information of China (English)

    CUI; Licheng; (崔立成); YANG; Hongsheng; (杨鸿生)

    2003-01-01

    Mode matching method is used to analyze the scattering characteristics of the rectangular-to-circular groove waveguide junction. Firstly, the scattering matrix equation is obtained by matching the electromagnetic fields at the boundary of the junction. The scattering coefficients can be obtained from the equation. Secondly the scattering characteristics of the iris with rectangular window positioned in circular groove waveguide are briefly analyzed. Thirdly, the convergent problem is discussed and the numerical results are given. At last experiment is made and good agreement is found between the calculated results and the measured results.

  8. Tailoring Very-High-n Circular Wavepackets

    Energy Technology Data Exchange (ETDEWEB)

    Reinhold, Carlos O [ORNL; Yoshida, S. [Vienna University of Technology, Austria; Burgdorfer, J. [Vienna University of Technology, Austria; Mestayer, J. J. [Rice University; Wyker, B. [Rice University; Lancaster, J. C. [Rice University; Dunning, F. B. [Rice University

    2008-01-01

    We describe a protocol to generate transiently localized circular wavepackets in very-high-n Rydberg states. These are created from strongly-polarized quasi-one-dimensional Rydberg states by applying a transverse pulsed electric field. The resulting wavepacket becomes transiently localized as the result of focusing and travels in a nearly circular Bohr-like orbit around the nucleus for several orbital periods. The localization properties can be controlled by carefully choosing the shape of the field pulse, in particular, its rise and fall times. Remarkably, the wavepackets exhibit classical revivals after the initial dephasing on time scales shorter than those expected for quantum revivals.

  9. Stink Bug Feeding Induces Fluorescence in Developing Cotton Bolls

    Directory of Open Access Journals (Sweden)

    Toews Michael D

    2011-08-01

    Full Text Available Abstract Background Stink bugs (Hemiptera: Pentatomidae comprise a critically important insect pest complex affecting 12 major crops worldwide including cotton. In the US, stink bug damage to developing cotton bolls causes boll abscission, lint staining, reduced fiber quality, and reduced yields with estimated losses ranging from 10 to 60 million dollars annually. Unfortunately, scouting for stink bug damage in the field is laborious and excessively time consuming. To improve scouting accuracy and efficiency, we investigated fluorescence changes in cotton boll tissues as a result of stink bug feeding. Results Fluorescent imaging under long-wave ultraviolet light showed that stink bug-damaged lint, the inner carpal wall, and the outside of the boll emitted strong blue-green fluorescence in a circular region near the puncture wound, whereas undamaged tissue emissions occurred at different wavelengths; the much weaker emission of undamaged tissue was dominated by chlorophyll fluorescence. We further characterized the optimum emission and excitation spectra to distinguish between stink bug damaged bolls from undamaged bolls. Conclusions The observed characteristic fluorescence peaks associated with stink bug damage give rise to a fluorescence-based method to rapidly distinguish between undamaged and stink bug damaged cotton bolls. Based on the fluorescent fingerprint, we envision a fluorescence reflectance imaging or a fluorescence ratiometric device to assist pest management professionals with rapidly determining the extent of stink bug damage in a cotton field.

  10. Fundamentals of fluorescence and fluorescence microscopy.

    Science.gov (United States)

    Wolf, David E

    2013-01-01

    This chapter discusses the fundamental physics of fluorescence. The application of fluorescence to microscopy represents an important transition in the development of microscopy, particularly as it applies to biology. It enables quantitating the amounts of specific molecules within a cell, determining whether molecules are complexing on a molecular level, measuring changes in ionic concentrations within cells and organelles, and measuring molecular dynamics. This chapter also discusses the issues important to quantitative measurement of fluorescence and focuses on four of quantitative measurements of fluorescence--boxcar-gated detection, streak cameras, photon correlation, and phase modulation. Although quantitative measurement presents many pitfalls to the beginner, it also presents significant opportunities to one skilled in the art. This chapter also examines how fluorescence is measured in the steady state and time domain and how fluorescence is applied in the modern epifluorescence microscope.

  11. Discrete Fresnel Transform and Its Circular Convolution

    CERN Document Server

    Ouyang, Xing; Gunning, Fatima; Zhang, Hongyu; Guan, Yong Liang

    2015-01-01

    Discrete trigonometric transformations, such as the discrete Fourier and cosine/sine transforms, are important in a variety of applications due to their useful properties. For example, one well-known property is the convolution theorem for Fourier transform. In this letter, we derive a discrete Fresnel transform (DFnT) from the infinitely periodic optical gratings, as a linear trigonometric transform. Compared to the previous formulations of DFnT, the DFnT in this letter has no degeneracy, which hinders its mathematic applications, due to destructive interferences. The circular convolution property of the DFnT is studied for the first time. It is proved that the DFnT of a circular convolution of two sequences equals either one circularly convolving with the DFnT of the other. As circular convolution is a fundamental process in discrete systems, the DFnT not only gives the coefficients of the Talbot image, but can also be useful for optical and digital signal processing and numerical evaluation of the Fresnel ...

  12. Beam Dynamics and Beam Losses - Circular Machines

    CERN Document Server

    Kain, V

    2016-01-01

    A basic introduction to transverse and longitudinal beam dynamics as well as the most relevant beam loss mechanisms in circular machines will be presented in this lecture. This lecture is intended for physicists and engineers with little or no knowledge of this subject.

  13. Circular Thermodynamics of Organisms and Sustainable Systems

    Directory of Open Access Journals (Sweden)

    Mae-Wan Ho

    2013-07-01

    Full Text Available A circular thermodynamics of organisms and sustainable systems is presented based on dynamic closures in nested space-time domains that enable the system to approach the ideal of zero entropy production simultaneously at equilibrium and far from equilibrium conditions.

  14. Institutional incentives in circular economy transition

    NARCIS (Netherlands)

    Fischer, Aglaia; Pascucci, Stefano

    2016-01-01

    The aim of this paper is to gain insight into how requirements for transitioning to circular economy creates new organizational forms in inter-firm collaborations, and ultimately how they stimulate the emergence of new institutions enhancing sustainability. Two strands of literature, one on circu

  15. Time can't be circular

    CERN Multimedia

    2003-01-01

    "Delivering the Albert Einstein lecture at the Centre for Philosophy and Foundations of Science on Tuesday, Nobel Laureate Professor Gerard Hooft said that any notion of time can not be circular or have loops or multi dimensionality" (1/2 page).

  16. A yarn interaction model for circular braiding

    NARCIS (Netherlands)

    Ravenhorst, van J.H.; Akkerman, R.

    2016-01-01

    Machine control data for the automation of the circular braiding process has been generated using previously published mathematical models that neglect yarn interaction. This resulted in a significant deviation from the required braid angle at mandrel cross-sectional changes, likely caused by an inc

  17. All-dielectric metasurface circular dichroism waveplate

    Science.gov (United States)

    Hu, Jingpei; Zhao, Xiaonan; Lin, Yu; Zhu, Aijiao; Zhu, Xiaojun; Guo, Peiji; Cao, Bing; Wang, Chinhua

    2017-01-01

    We propose and experimentally demonstrate a high efficient circularly polarizing dichroism waveplate (CPDW) using a Si-based all-dielectric 2Dchiral metasurface. We demonstrate that the CPDW exhibits a unique dichroism in that it functions as a transmissive quarter waveplate for one of either left-or right-handed circularly polarized incident lightand a reflective mirror for the opposite polarization. The circular polarization dichroism (CPD = IRCP ‑ ILCP) in transmission at wavelength ~1.5 μm reaches 97% and the extinction ratio (ER = IRCP/ILCP) is as high as 345:1. Experimental fabrications and measurements of the proposed all-dielectric metasurface are implemented and found to be in excellent agreement with the simulations. The proposed all-dielectric chiral metasurface is of advantages of high-dichroism, easy-fabrication and standard semiconductor fabrication techniques compatible, which could lead to enhanced security in fiber and free-space communications, as well as imaging and sensing applications for circularly polarized light with a highly integrated photonic platform.

  18. The Global Future Circular Colliders Effort

    CERN Document Server

    Benedikt, Michael

    2013-01-01

    This presentation has been given during the P5 Workshop at BNL Brookhaven (US). It contains - Global Future Circular Collier Studies Overview and Status - Main challenges and R&D areas for hadron collider - Main challenges and R&D areas for lepton collider - Conclusions

  19. CIRCULAR CHROMATIC NUMBER AND MYCIELSKI GRAPHS

    Institute of Scientific and Technical Information of China (English)

    Liu Hongmei

    2006-01-01

    For a general graph G, M(G) denotes its Mycielski graph. This article gives a number of new sufficient conditions for G to have the circular chromatic number xc (M(G))equals to the chromatic number x(M(G)), which have improved some best sufficient conditions published up to date.

  20. All-dielectric metasurface circular dichroism waveplate

    Science.gov (United States)

    Hu, Jingpei; Zhao, Xiaonan; Lin, Yu; Zhu, Aijiao; Zhu, Xiaojun; Guo, Peiji; Cao, Bing; Wang, Chinhua

    2017-01-01

    We propose and experimentally demonstrate a high efficient circularly polarizing dichroism waveplate (CPDW) using a Si-based all-dielectric 2Dchiral metasurface. We demonstrate that the CPDW exhibits a unique dichroism in that it functions as a transmissive quarter waveplate for one of either left-or right-handed circularly polarized incident lightand a reflective mirror for the opposite polarization. The circular polarization dichroism (CPD = IRCP − ILCP) in transmission at wavelength ~1.5 μm reaches 97% and the extinction ratio (ER = IRCP/ILCP) is as high as 345:1. Experimental fabrications and measurements of the proposed all-dielectric metasurface are implemented and found to be in excellent agreement with the simulations. The proposed all-dielectric chiral metasurface is of advantages of high-dichroism, easy-fabrication and standard semiconductor fabrication techniques compatible, which could lead to enhanced security in fiber and free-space communications, as well as imaging and sensing applications for circularly polarized light with a highly integrated photonic platform. PMID:28139753

  1. Numerical simulation of flow past circular duct

    Institute of Scientific and Technical Information of China (English)

    Ze-gao YIN; Xian-wei Cao; Hong-da SHI; Jian MA

    2010-01-01

    The Renormalization Group(RNG)k-ε turbulence model and Volume of Fluid(VOF)method were employed to simulate the flow past a circular duct in order to obtain and analyze hydraulic parameters.According to various upper and bottom gap ratios,the force on the duct was calculated.When the bottom gap ratio is 0,the drag force coefficient,lift force coefficient,and composite force reach their maximum values,and the azimuth reaches its minimum.With an increase of the bottom gap ratio from 0 to 1,the drag force coefficient and composite force decrease sharply,and the lift force coefficient does not decreases so much,but the azimuth increases dramatically.With a continuous increase of the bottom gap ratio from 1 upward,the drag force coefficient,lift force coefficient,composite force,and azimuth vary little.Thus,the bottom gap ratio is the key factor influencing the force on the circular duct.When the bottom gap ratio is less than 1,the upper gap ratio has a remarkable influence on the force of the circular duct.When the bottom gap ratio is greater than 1,the variation of the upper gap ratio has little influence on the force of the circular duct.

  2. Principles of fluorescence techniques

    CERN Document Server

    2016-01-01

    Fluorescence techniques are being used and applied increasingly in academics and industry. The Principles of Fluorescence Techniques course will outline the basic concepts of fluorescence techniques and the successful utilization of the currently available commercial instrumentation. The course is designed for students who utilize fluorescence techniques and instrumentation and for researchers and industrial scientists who wish to deepen their knowledge of fluorescence applications. Key scientists in the field will deliver theoretical lectures. The lectures will be complemented by the direct utilization of steady-state and lifetime fluorescence instrumentation and confocal microscopy for FLIM and FRET applications provided by leading companies.

  3. Reviews in fluorescence 2010

    CERN Document Server

    Geddes, Chris D

    2011-01-01

    ""Reviews in Fluorescence 2010"", the seventh volume of the book serial from Springer, serves as a comprehensive collection of current trends and emerging hot topics in the field of fluorescence and closely related disciplines. It summarizes the year's progress in fluorescence and its applications, with authoritative analytical reviews specialized enough to be attractive to professional researchers, yet also appealing to the wider audience of scientists in related disciplines of fluorescence. ""Reviews in Fluorescence"" offers an essential reference material for any lab working in the fluoresc

  4. A simple circular-polarized antenna: Circular waveguide horn coated with lossy magnetic material

    Science.gov (United States)

    Lee, Choon S.; Justice, D. W.; Lee, Shung-Wu

    1988-01-01

    It is shown that a circular waveguide horn coated with a lossy material in its interior wall can be used as an alternative to a corrugated waveguide for radiating a circularly polarized (CP) field. To achieve good CP radiation, the diameter of the structure must be larger than the free-space wavelength, and the coating material must be sufficiently lossy and magnetic. The device is cheaper and lighter in weight than the corrugated one.

  5. SOME RESULTS ON CIRCULAR PERFECT GRAPHS AND PERFECT GRAPHS

    Institute of Scientific and Technical Information of China (English)

    XU Baogang

    2005-01-01

    An r-circular coloring of a graph G is a map f from V(G) to the set of open unit intervals of an Euclidean circle of length r,such that f(u) ∩ f(v) = φ whenever uv ∈ E(G).Circular perfect graphs are defined analogously to perfect graphs by means of two parameters,the circular chromatic number and the circular clique number.In this paper,we study the properties of circular perfect graphs.We give (1) a necessary condition for a graph to be circular perfect,(2) some circular critical imperfect graphs,and (3) a characterization of graphs with the property that each of their induced subgraphs has circular clique number the same as its clique number,and then the two conjectures that are equivalent to the perfect graph conjecture.

  6. Circular Economy Development Mode Based on System Theory

    Institute of Scientific and Technical Information of China (English)

    Xiao Huamao; Wang Fengqi

    2007-01-01

    The paper tries to explore circular economy from the viewpoint of the system theory.Circular economy is a kind of complicated economic acdvity,and it is a wholly new ecotype economy pmposed by Western countries after they had summed up many experiences and lessons from traditional economy.It is an entirety and has many layers.It keeps an open and dynamic balance.Because the system theory is the theoretical foundation of circular economy,we should systemically analyze and study circular economy from the macroscopic view,correctly grasp its operational laws,improve its service functions,and realize human beings's ustainable development.The paper introduces the content and general characteristics of the system theory and the idea of circular economy.Then it analyzes circular economy based on the systemtheory.The paper concludes that the intonation of circular economy and the system theory can promote the functions of circular economy.

  7. Fluorescence correlation spectroscopy

    NARCIS (Netherlands)

    Hink, M.A.; Verveer, P.J.

    2015-01-01

    Fluorescence fluctuation spectroscopy techniques allow the quantification of fluorescent molecules present at the nanomolar concentration level. After a brief introduction to the technique, this chapter presents a protocol including background information in order to measure and quantify the molecul

  8. The circular F-actin bundles provide a track for turnaround and bidirectional movement of mitochondria in Arabidopsis root hair.

    Directory of Open Access Journals (Sweden)

    Yu Zhang

    Full Text Available The movement of organelles in root hairs primarily occurs along the actin cytoskeleton. Circulation and "reverse fountain" cytoplasmic streaming constitute the typical forms by which most organelles (such as mitochondria and the Golgi apparatus in plant root hair cells engage in bidirectional movement. However, there remains a lack of in-depth research regarding the relationship between the distribution of the actin cytoskeleton and turnaround organelle movement in plant root hair cells.In this paper, Arabidopsis seedlings that had been stably transformed with a GFP-ABD2-GFP (green fluorescent protein-actin-binding domain 2-green fluorescent protein construct were utilized to study the distribution of bundles of filamentous (F-actin and the directed motion of mitochondria along these bundles in root hairs. Observations with a confocal laser scanning microscope revealed that there were widespread circular F-actin bundles in the epidermal cells and root hairs of Arabidopsis roots. In root hairs, these circular bundles primarily start at the sub-apical region, which is the location where the turnaround movement of organelles occurs. MitoTracker probes were used to label mitochondria, and the dynamic observation of root hair cells with a confocal laser scanning microscope indicated that turnaround mitochondrial movement occurred along circular F-actin bundles.Relevant experimental results demonstrated that the circular F-actin bundles provide a track for the turnaround and bidirectional movement of mitochondria.

  9. Safe biodegradable fluorescent particles

    Science.gov (United States)

    Martin, Sue I.; Fergenson, David P.; Srivastava, Abneesh; Bogan, Michael J.; Riot, Vincent J.; Frank, Matthias

    2010-08-24

    A human-safe fluorescence particle that can be used for fluorescence detection instruments or act as a safe simulant for mimicking the fluorescence properties of microorganisms. The particle comprises a non-biological carrier and natural fluorophores encapsulated in the non-biological carrier. By doping biodegradable-polymer drug delivery microspheres with natural or synthetic fluorophores, the desired fluorescence can be attained or biological organisms can be simulated without the associated risks and logistical difficulties of live microorganisms.

  10. Development pattern of circular economy in Jiangsu coastland

    OpenAIRE

    Wang, Liang

    2009-01-01

    Circular economy is an effective development pattern to balance economic growth, social development and environmental protection. Based on apprehending the connotation of circular economy, this paper fully considers and studies on the future trends in this area according to the theory of circular economy and the empirical circumstances of Jiangsu Coastland. This paper also discusses the circular economy development pattern adopted by Jiangsu coastland during economic and social development fr...

  11. Binding phenomena and fluorescence quenching. II: Photophysics of aromatic residues and dependence of fluorescence spectra on protein conformation

    Science.gov (United States)

    Callis, Patrik R.

    2014-12-01

    The three amino acids with aromatic ring side chains-phenylalanine (Phe), tyrosine (Tyr), and especially tryptophan (Trp) have played a long and productive role in helping unlock the secrets of protein behavior by optical spectroscopy (absorption, fluorescence, circular dichroism, etc.) In principle, an appropriately placed Trp will undergo fluorescence wavelength and/or intensity changes upon whatever functional process a protein performs. Although perceived to be enigmatic and not well understood, Trp is arguably now better understood than many of the extrinsic probes currently in use. Basic principles of intrinsic tryptophan fluorescence quenching and wavelength shifts in proteins are presented, with strong emphasis on the importance of electrostatics. The condensed description of findings from recent experiments and simulations of tryptophan fluorescence and intrinsic quenching in proteins is designed to help authors in planning and interpreting experimental results of ligand binding studies.

  12. Photoinduced Circular Anisotropy in Side-Chain Azobenzene Polyesters

    DEFF Research Database (Denmark)

    Nikolova, L.; Todorov, T.; Ivanov, M.;

    1997-01-01

    We report for the first time the inducing of large circular anisotropy in previously unoriented films of side-chain azobenzene polyesters on illumination with circularly polarized light at a wavelength of 488 nm. The circular dichroism and optical activity are measured simultaneously in real time...

  13. Comprehensive Evaluation of Circular Economic Development in North Anhui Province

    OpenAIRE

    Hu, Shuheng; Zhang, Simei; Chen, Guangzhou; Xu, Min

    2009-01-01

    In view of the characteristics of north Anhui Province, an index system was constructed for evaluating the development level of circular economy according to relevant principles, Principal Component Analysis and Analytic Hierarchy Process were adopted to evaluate the circular economic development in north Anhui Province, and corresponding measures were put forward to promote the circular economy in north Anhui Province.

  14. A product design framework for a circular economy

    NARCIS (Netherlands)

    Van den Berg, M.R.; Bakker, C.A.

    2015-01-01

    The paper provides a circular economy framework from a product design perspective with tools to aid product designers in applying circular product design in practice. Design research for circular economy has so far mainly been limited to referring to existing fields of research such as design for di

  15. A Permutation Importance-Based Feature Selection Method for Short-Term Electricity Load Forecasting Using Random Forest

    Directory of Open Access Journals (Sweden)

    Nantian Huang

    2016-09-01

    Full Text Available The prediction accuracy of short-term load forecast (STLF depends on prediction model choice and feature selection result. In this paper, a novel random forest (RF-based feature selection method for STLF is proposed. First, 243 related features were extracted from historical load data and the time information of prediction points to form the original feature set. Subsequently, the original feature set was used to train an RF as the original model. After the training process, the prediction error of the original model on the test set was recorded and the permutation importance (PI value of each feature was obtained. Then, an improved sequential backward search method was used to select the optimal forecasting feature subset based on the PI value of each feature. Finally, the optimal forecasting feature subset was used to train a new RF model as the final prediction model. Experiments showed that the prediction accuracy of RF trained by the optimal forecasting feature subset was higher than that of the original model and comparative models based on support vector regression and artificial neural network.

  16. Robust inference from multiple test statistics via permutations: a better alternative to the single test statistic approach for randomized trials.

    Science.gov (United States)

    Ganju, Jitendra; Yu, Xinxin; Ma, Guoguang Julie

    2013-01-01

    Formal inference in randomized clinical trials is based on controlling the type I error rate associated with a single pre-specified statistic. The deficiency of using just one method of analysis is that it depends on assumptions that may not be met. For robust inference, we propose pre-specifying multiple test statistics and relying on the minimum p-value for testing the null hypothesis of no treatment effect. The null hypothesis associated with the various test statistics is that the treatment groups are indistinguishable. The critical value for hypothesis testing comes from permutation distributions. Rejection of the null hypothesis when the smallest p-value is less than the critical value controls the type I error rate at its designated value. Even if one of the candidate test statistics has low power, the adverse effect on the power of the minimum p-value statistic is not much. Its use is illustrated with examples. We conclude that it is better to rely on the minimum p-value rather than a single statistic particularly when that single statistic is the logrank test, because of the cost and complexity of many survival trials.

  17. Interacting price model and fluctuation behavior analysis from Lempel-Ziv complexity and multi-scale weighted-permutation entropy

    Science.gov (United States)

    Li, Rui; Wang, Jun

    2016-01-01

    A financial price model is developed based on the voter interacting system in this work. The Lempel-Ziv complexity is introduced to analyze the complex behaviors of the stock market. Some stock market stylized facts including fat tails, absence of autocorrelation and volatility clustering are investigated for the proposed price model firstly. Then the complexity of fluctuation behaviors of the real stock markets and the proposed price model are mainly explored by Lempel-Ziv complexity (LZC) analysis and multi-scale weighted-permutation entropy (MWPE) analysis. A series of LZC analyses of the returns and the absolute returns of daily closing prices and moving average prices are performed. Moreover, the complexity of the returns, the absolute returns and their corresponding intrinsic mode functions (IMFs) derived from the empirical mode decomposition (EMD) with MWPE is also investigated. The numerical empirical study shows similar statistical and complex behaviors between the proposed price model and the real stock markets, which exhibits that the proposed model is feasible to some extent.

  18. Impedance properties of circular microstrip antenna

    Science.gov (United States)

    Deshpande, M. D.; Bailey, M. C.

    1983-01-01

    A moment method solution to the input impedance of a circular microstrip antenna excited by either a microstrip feed or a coaxial probe is presented. Using the exact dyadic Green's function and the Fourier transform the problem is formulated in terms of Richmond's reaction integral equation from which the unknown patch current can be solved for. The patch current is expanded in terms of regular surface patch modes and an attachment mode (for probe excited case) which insures continuity of the current at probe/patch junction, proper polarization and p-dependance of patch current in the vicinity of the probe. The input impedance of a circular microstrip antenna is computed and compared with earlier results. Effect of attachment mode on the input impedance is also discussed.

  19. The Biogenesis of Nascent Circular RNAs

    Directory of Open Access Journals (Sweden)

    Yang Zhang

    2016-04-01

    Full Text Available Steady-state circular RNAs (circRNAs have been mapped to thousands of genomic loci in mammals. We studied circRNA processing using metabolic tagging of nascent RNAs with 4-thiouridine (4sU. Strikingly, the efficiency of circRNA processing from pre-mRNA is extremely low endogenously. Additional studies revealed that back-splicing outcomes correlate with fast RNA Polymerase II elongation rate and are tightly controlled by cis-elements in vivo. Additionally, prolonged 4sU labeling in cells shows that circRNAs are largely processed post-transcriptionally and that circRNAs are stable. Circular RNAs that are abundant at a steady-state level tend to accumulate. This is particularly true in cells, such as neurons, that have slow division rates. This study uncovers features of circRNA biogenesis by investigating the link between nascent circRNA processing and transcription.

  20. Symmetric Circular Matchings and RNA Folding

    DEFF Research Database (Denmark)

    Hofacker, Ivo L.; Reidys, Christian; Stadler, Peter F.

    2012-01-01

    RNA secondary structures can be computed as optimal solutions of certain circular matching problems. An accurate treatment of this energy minimization problem has to account for the small --- but non-negligible --- entropic destabilization of secondary structures with non-trivial automorphisms....... Such intrinsic symmetries are typically excluded from algorithmic approaches, however, because the effects are small, they play a role only for RNAs with symmetries at sequence level, and they appear only in particular settings that are less frequently used in practical application, such as circular folding...... or the co-folding of two or more identical RNAs. Here, we show that the RNA folding problem with symmetry terms can still be solved with polynomial-time algorithms. Empirically, the fraction of symmetric ground state structures decreases with chain length, so that the error introduced by neglecting...

  1. Object Detection using Circular Hough Transform

    Directory of Open Access Journals (Sweden)

    Mohamed Rizon

    2005-01-01

    Full Text Available In this study we propose a new system to detect the object from an input image. The proposed system first uses the separability filter proposed by Fukui and Yamaguchi (Trans. IEICE Japan J80-D-II. 8, 2170-2177, 1997 to obtain the best object candidates and next, the system uses the Circular Hough Transform (CHT to detect the presence of circular shape. The main contribution of this work consists of using together two different techniques in order to take advantages from the peculiarity of each of them. As the results of the experiments, the object detection rate of the proposed system was 96% for 25 images by moving the circle template every 20 pixels to right and down.

  2. Circular β ensembles, CMV representation, characteristic polynomials

    Institute of Scientific and Technical Information of China (English)

    SU ZhongGen

    2009-01-01

    In this note we first briefly review some recent progress in the study of the circular β ensemble on the unit circle, where 0 > 0 is a model parameter. In the special cases β = 1,2 and 4, this ensemble describes the joint probability density of eigenvalues of random orthogonal, unitary and sympletic matrices, respectively. For general β, Killip and Nenciu discovered a five-diagonal sparse matrix model, the CMV representation. This representation is new even in the case β = 2; and it has become a powerful tool for studying the circular β ensemble. We then give an elegant derivation for the moment identities of characteristic polynomials via the link with orthogonal polynomials on the unit circle.

  3. SEAMLESS TECHNOLOGY ON CIRCULAR KNITTING MACHINES

    OpenAIRE

    CRETU Viorica

    2014-01-01

    With industrial progress, the advancements in garment manufacturing have evolved from cut & sew to complete garment knitting, which produces one entire garment without sewing or linking process. Seamless knitting technology is similar to sock manufacture, the specialized circular knitting machines producing 3 dimensional garments with no side seams, with the waistband integrated with body of the garment and with knitted washing instructions and logos. The paper starts by presenting the main a...

  4. MULTI SEGMENT CIRCULAR FRACTAL REFLECT ARRAY ANTENNA

    Directory of Open Access Journals (Sweden)

    Bahareh Baghani BAJGIRAN

    2014-01-01

    Full Text Available in this paper with using novel fractal structure which is composed of multi segment circular fractal. A unit cell and then reflectarray antenna have been designed. The unit cell of reflect array has been designed in 4.4 GHz with 24*24*1 mm3 dimension. The reflectarray is consist of 400 (20* 20 elements that even element is placed in the locus has been calculated. Maximum gain of antenna is 12.9 dBi.

  5. Notas sobre una escuela circular prefabricada

    Directory of Open Access Journals (Sweden)

    Neutra, Richard J.

    1961-09-01

    Full Text Available En 1930, la idea de una planta circular para escuela, abarcando un espacio exterior frente a un edificio de usos varios, era ya antigua por lo menos en diez años. El Museo de Arte Moderno de Nueva York, que por aquellos tiempos instaló y preparó en sus nuevas dependencias la primera exposición masiva de Arquitectura moderna, dispuso una magnífica maqueta de este proyecto de Richard J. Neutra.

  6. Nuclear collisions at the Future Circular Collider

    Science.gov (United States)

    Armesto, N.; Dainese, A.; d'Enterria, D.; Masciocchi, S.; Roland, C.; Salgado, C. A.; van Leeuwen, M.; Wiedemann, U. A.

    2016-12-01

    The Future Circular Collider is a new proposed collider at CERN with centre-of-mass energies around 100 TeV in the pp mode. Ongoing studies aim at assessing its physics potential and technical feasibility. Here we focus on updates in physics opportunities accessible in pA and AA collisions not covered in previous Quark Matter contributions, including Quark-Gluon Plasma and gluon saturation studies, novel hard probes of QCD matter, and photon-induced collisions.

  7. Nuclear collisions at the Future Circular Collider

    CERN Document Server

    Armesto, N; d'Enterria, D; Masciocchi, S; Roland, C; Salgado, C A; van Leeuwen, M; Wiedemann, U A

    2016-01-01

    The Future Circular Collider is a new proposed collider at CERN with centre-of-mass energies around 100 TeV in the pp mode. Ongoing studies aim at assessing its physics potential and technical feasibility. Here we focus on updates in physics opportunities accessible in pA and AA collisions not covered in previous Quark Matter contributions, including Quark-Gluon Plasma and gluon saturation studies, novel hard probes of QCD matter, and photon-induced collisions.

  8. FROM CIRCULAR ECONOMY TO BLUE ECONOMY

    OpenAIRE

    Iustin-Emanuel, ALEXANDRU; Alexandru, TASNADI

    2014-01-01

    Addressing the subject of this essay is based on the background ideas generated by a new branch of science - Biomimicry. According to European Commissioner for the Environment, "Nature is the perfect model of circular economy". Therefore, by imitating nature, we are witnessing a process of cycle redesign: production-consumption-recycling. The authors present some reflections on the European Commission's decision to adopt after July 1, 2014 new measures concerning the development of more circu...

  9. Circular Intensity Differential Scattering of chiral molecules

    Energy Technology Data Exchange (ETDEWEB)

    Bustamante, C.J.

    1980-12-01

    In this thesis a theory of the Circular Intensity Differential Scattering (CIDS) of chiral molecules as modelled by a helix oriented with respect to the direction of incidence of light is presented. It is shown that a necessary condition for the existence of CIDS is the presence of an asymmetric polarizability in the scatterer. The polarizability of the scatterer is assumed generally complex, so that both refractive and absorptive phenomena are taken into account.

  10. Propulsion by Helical Strips in Circular Channels

    Science.gov (United States)

    Yesilyurt, Serhat; Demir, Ebru

    2016-11-01

    Progress in manufacturing techniques avails the production of artificial micro swimmers (AMS) in various shapes and sizes. There are numerous studies on the generation of efficient locomotion by means of helical tails with circular cross-sections. This work focuses on locomotion with helical strips in circular channels. A CFD model is used to analyze the effects of geometric parameters and the radius of the channel on swimming velocity of infinite helical-strips in circular channels. Results show that there is an optimum wavelength that depends on thickness to channel radius ratio, suggesting that these parameters need to be optimized simultaneously. With constant torque, thinner strips swim faster, whereas under constant angular velocity application, thicker strips (in radial direction) prevail. As width approaches the wavelength, velocity decreases under both conditions, unless a magnetically coated tail is simulated, for which width has an optimum value. Increasing channel radius to helix amplitude ratio increases the velocity up to a maximum and after a slight drop, saturation occurs as bulk swimming conditions are approached.

  11. FROM CIRCULAR ECONOMY TO BLUE ECONOMY

    Directory of Open Access Journals (Sweden)

    Iustin-Emanuel, ALEXANDRU

    2014-11-01

    Full Text Available Addressing the subject of this essay is based on the background ideas generated by a new branch of science - Biomimicry. According to European Commissioner for the Environment, "Nature is the perfect model of circular economy". Therefore, by imitating nature, we are witnessing a process of cycle redesign: production-consumption-recycling. The authors present some reflections on the European Commission's decision to adopt after July 1, 2014 new measures concerning the development of more circular economies. Starting from the principles of Ecolonomy, which is based on the whole living paradigm, this paper argues for the development within each economy of entrepreneurial policies related to the Blue economy. In its turn, Blue economy is based on scientific analyses that identify the best solutions in a business. Thus, formation of social capital will lead to healthier and cheaper products, which will stimulate entrepreneurship. Blue economy is another way of thinking economic practice and is a new model of business design. It is a healthy, sustainable business, designed for people. In fact, it is the core of the whole living paradigm through which, towards 2020, circular economy will grow more and more.

  12. Oxygen transfer in circular surface aeration tanks.

    Science.gov (United States)

    Rao, Achanta Ramakrishna; Patel, Ajey Kumar; Kumar, Bimlesh

    2009-06-01

    Surface aeration systems employed in activated sludge plants are the most energy-intensive units of the plants and typically account for a higher percentage of the treatment facility's total energy use. The geometry of the aeration tank imparts a major effect on the system efficiency. It is said that at optimal geometric conditions, systems exhibits the maximum efficiency. Thus the quantification of the optimal geometric conditions in surface aeration tanks is needed. Optimal geometric conditions are also needed to scale up the laboratory result to the field installation. In the present work, experimental studies have been carried out on baffled and unbaffled circular surface aeration tanks to ascertain the optimal geometric conditions. It is found that no optimal geometric conditions exist for the liquid/water depth in circular surface aeration tanks; however, for design purposes, a standard value has been assumed. Based on the optimal geometric conditions, a scale-up equation has been developed for the baffled circular surface aeration tanks.

  13. Circular block matching based video stabilization

    Science.gov (United States)

    Xu, Lidong; Fu, Fangwen; Lin, Xinggang

    2005-07-01

    Video sequences captured by handheld digital camera need to be stabilized to eliminate the tiresome effects caused by camera"s undesirable shake or jiggle. The key issue of video stabilization is to estimate the global motion parameters between two successive frames. In this paper, a novel circular block matching algorithm is proposed to estimate the global motion parameters. This algorithm can deal with not only translational motion but even large rotational motion. For an appointed circular block in current frame, a four-dimensional rotation invariant feature vector is firstly extracted from it and used to judge if it is an effective block. Then the rotation invariant features based circular block matching process is performed to find the best matching blocks in reference frame for those effective blocks. With the matching results of any two effective blocks, a two-dimensional motion model is constructed to produce one group of frame motion parameters. A statistical method is proposed to calculate the estimated global motion parameters with all groups of global motion parameters. Finally, using the estimated motion parameters as the initial values, an iteration algorithm is introduced to obtain the refined global motion parameters. The experimental results show that the proposed algorithm is excellent in stabilizing frames with even burst global translational and rotational motions.

  14. Architectural Surfaces and Structures from Circular Arcs

    KAUST Repository

    Shi, Ling

    2013-12-01

    In recent decades, the popularity of freeform shapes in contemporary architecture poses new challenges to digital design. One of them is the process of rationalization, i.e. to make freeform skins or structures affordable to manufacture, which draws the most attention from geometry researchers. In this thesis, we aim to realize this process with simple geometric primitives, circular arcs. We investigate architectural surfaces and structures consisting of circular arcs. Our focus is lying on how to employ them nicely and repetitively in architectural design, in order to decrease the cost in manufacturing. Firstly, we study Darboux cyclides, which are algebraic surfaces of order ≤ 4. We provide a computational tool to identify all families of circles on a given cyclide based on the spherical model of M ̈obius geometry. Practical ways to design cyclide patches that pass through certain inputs are presented. In particular, certain triples of circle families on Darboux cyclides may be suitably arranged as 3-webs. We provide a complete classification of all possible 3-webs of circles on Darboux cyclides. We then investigate the circular arc snakes, which are smooth sequences of circu- lar arcs. We evolve the snakes such that their curvature, as a function of arc length, remains unchanged. The evolution of snakes is utilized to approximate given surfaces by circular arcs or to generated freeform shapes, and it is realized by a 2-step pro- cess. More interestingly, certain 6-arc snake with boundary constraints can produce a smooth self motion, which can be employed to build flexible structures. Another challenging topic is approximating smooth freeform skins with simple panels. We contribute to this problem area by approximating a negatively-curved 5 surface with a smooth union of rational bilinear patches. We provide a proof for vertex consistency of hyperbolic nets using the CAGD approach of the rational B ́ezier form. Moreover, we use Darboux transformations for the

  15. Background, Pattern and Policy of China for Developing Circular Economy

    Institute of Scientific and Technical Information of China (English)

    Zhu Dajian

    2008-01-01

    Circular economy has become one of China's important strategies to realize scientific development and build ecological civilization at present. As in China circular economy was put forward as a new economic pattern, the international community generally holds that this is an innovative move for China's economy to realize leap-forward development and hopes to learn more about the theory, policy and practice relating to China's circular economy. This article introduces and comments on the necessity to develop circular economy in China, implications and characteristics of China's circular economy, and China's main practices and policies to promote it at present.

  16. A Wideband Circularly Polarized Antenna with a Multiple-Circular-Sector Dielectric Resonator.

    Science.gov (United States)

    Trinh-Van, Son; Yang, Youngoo; Lee, Kang-Yoon; Hwang, Keum Cheol

    2016-11-03

    This paper presents the design of a wideband circularly polarized antenna using a multiple-circular-sector dielectric resonator (DR). The DR is composed of twelve circular-sector DRs with identical central angles of 30 ∘ but with different radii. A genetic algorithm is utilized to optimize the radii of the twelve circular-sector DRs to realize wideband circular polarization. The proposed antenna is excited using an aperture-coupled feeding technique through a narrow rectangular slot etched onto the ground plane. An antenna prototype is experimentally verified. The measured -10 dB reflection and 3 dB axial ratio (AR) bandwidths are 31.39% (1.88-2.58 GHz) and 19.30% (2.06-2.50 GHz), respectively, covering the operating bands of the following systems: UMTS-2100 (2.145 GHz), WiMAX (2.3 GHz), and Wi-Fi (2.445 GHz). A measured peak gain of 7.65 dBic at 2.225 GHz and gain variation of less than 2.70 dBic within the measured 3 dB AR bandwidth are achieved. In addition, the radiation patterns of the proposed antenna are presented and discussed.

  17. Nanoconfined circular and linear DNA - equilibrium conformations and unfolding kinetics

    CERN Document Server

    Alizadehheidari, M; Noble, C; Reiter-Schad, M; Nyberg, L K; Fritzsche, J; Mehlig, B; Tegenfeldt, J O; Ambjörnsson, T; Persson, F; Westerlund, F

    2016-01-01

    Studies of circular DNA confined to nanofluidic channels are relevant both from a fundamental polymer-physics perspective and due to the importance of circular DNA molecules in vivo. We here observe the unfolding of DNA from the circular to linear configuration as a light-induced double strand break occurs, characterize the dynamics, and compare the equilibrium conformational statistics of linear and circular configurations. This is important because it allows us to determine to which extent existing statistical theories describe the extension of confined circular DNA. We find that the ratio of the extensions of confined linear and circular DNA configurations increases as the buffer concentration decreases. The experimental results fall between theoretical predictions for the extended de Gennes regime at weaker confinement and the Odijk regime at stronger confinement. We show that it is possible to directly distinguish between circular and linear DNA molecules by measuring the emission intensity from the DNA....

  18. Computational simulations of hydrogen circular migration in protonated acetylene induced by circularly polarized light

    Science.gov (United States)

    Shi, Xuetao; Li, Wen; Schlegel, H. Bernhard

    2016-08-01

    The hydrogens in protonated acetylene are very mobile and can easily migrate around the C2 core by moving between classical and non-classical structures of the cation. The lowest energy structure is the T-shaped, non-classical cation with a hydrogen bridging the two carbons. Conversion to the classical H2CCH+ ion requires only 4 kcal/mol. The effect of circularly polarized light on the migration of hydrogens in oriented C2H3+ has been simulated by Born-Oppenheimer molecular dynamics. Classical trajectory calculations were carried out with the M062X/6-311+G(3df,2pd) level of theory using linearly and circularly polarized 32 cycle 7 μm cosine squared pulses with peak intensity of 5.6 × 1013 W/cm2 and 3.15 × 1013 W/cm2, respectively. These linearly and circularly polarized pulses transfer similar amounts of energy and total angular momentum to C2H3+. The average angular momentum vectors of the three hydrogens show opposite directions of rotation for right and left circularly polarized light, but no directional preference for linearly polarized light. This difference results in an appreciable amount of angular displacement of the three hydrogens relative to the C2 core for circularly polarized light, but only an insignificant amount for linearly polarized light. Over the course of the simulation with circularly polarized light, this corresponds to a propeller-like motion of the three hydrogens around the C2 core of protonated acetylene.

  19. Fast bootstrapping and permutation testing for assessing reproducibility and interpretability of multivariate fMRI decoding models.

    Directory of Open Access Journals (Sweden)

    Bryan R Conroy

    Full Text Available Multivariate decoding models are increasingly being applied to functional magnetic imaging (fMRI data to interpret the distributed neural activity in the human brain. These models are typically formulated to optimize an objective function that maximizes decoding accuracy. For decoding models trained on full-brain data, this can result in multiple models that yield the same classification accuracy, though some may be more reproducible than others--i.e. small changes to the training set may result in very different voxels being selected. This issue of reproducibility can be partially controlled by regularizing the decoding model. Regularization, along with the cross-validation used to estimate decoding accuracy, typically requires retraining many (often on the order of thousands of related decoding models. In this paper we describe an approach that uses a combination of bootstrapping and permutation testing to construct both a measure of cross-validated prediction accuracy and model reproducibility of the learned brain maps. This requires re-training our classification method on many re-sampled versions of the fMRI data. Given the size of fMRI datasets, this is normally a time-consuming process. Our approach leverages an algorithm called fast simultaneous training of generalized linear models (FaSTGLZ to create a family of classifiers in the space of accuracy vs. reproducibility. The convex hull of this family of classifiers can be used to identify a subset of Pareto optimal classifiers, with a single-optimal classifier selectable based on the relative cost of accuracy vs. reproducibility. We demonstrate our approach using full-brain analysis of elastic-net classifiers trained to discriminate stimulus type in an auditory and visual oddball event-related fMRI design. Our approach and results argue for a computational approach to fMRI decoding models in which the value of the interpretation of the decoding model ultimately depends upon optimizing a

  20. Forest Disturbance Mapping Using Dense Synthetic Landsat/MODIS Time-Series and Permutation-Based Disturbance Index Detection

    Directory of Open Access Journals (Sweden)

    David Frantz

    2016-03-01

    Full Text Available Spatio-temporal information on process-based forest loss is essential for a wide range of applications. Despite remote sensing being the only feasible means of monitoring forest change at regional or greater scales, there is no retrospectively available remote sensor that meets the demand of monitoring forests with the required spatial detail and guaranteed high temporal frequency. As an alternative, we employed the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM to produce a dense synthetic time series by fusing Landsat and Moderate Resolution Imaging Spectroradiometer (MODIS nadir Bidirectional Reflectance Distribution Function (BRDF adjusted reflectance. Forest loss was detected by applying a multi-temporal disturbance detection approach implementing a Disturbance Index-based detection strategy. The detection thresholds were permutated with random numbers for the normal distribution in order to generate a multi-dimensional threshold confidence area. As a result, a more robust parameterization and a spatially more coherent detection could be achieved. (i The original Landsat time series; (ii synthetic time series; and a (iii combined hybrid approach were used to identify the timing and extent of disturbances. The identified clearings in the Landsat detection were verified using an annual woodland clearing dataset from Queensland’s Statewide Landcover and Trees Study. Disturbances caused by stand-replacing events were successfully identified. The increased temporal resolution of the synthetic time series indicated promising additional information on disturbance timing. The results of the hybrid detection unified the benefits of both approaches, i.e., the spatial quality and general accuracy of the Landsat detection and the increased temporal information of synthetic time series. Results indicated that a temporal improvement in the detection of the disturbance date could be achieved relative to the irregularly spaced Landsat

  1. Dimerization process of amyloid-β(29-42) studied by the Hamiltonian replica-permutation molecular dynamics simulations.

    Science.gov (United States)

    Itoh, Satoru G; Okumura, Hisashi

    2014-10-02

    The amyloid-β peptides form amyloid fibrils which are associated with Alzheimer's disease. Amyloid-β(29-42) is its C-terminal fragment and a critical determinant of the amyloid formation rate. This fragment forms the amyloid fibril by itself. However, the fragment conformation in the fibril has yet to be determined. The oligomerization process including the dimerization process is also still unknown. The dimerization process corresponds to an early process of the amyloidogenesis. In order to investigate the dimerization process and conformations, we applied the Hamiltonian replica-permutation method, which is a better alternative to the Hamiltonian replica-exchange method, to two amyloid-β(29-42) molecules in explicit water solvent. At the first step of the dimerization process, two amyloid-β(29-42) molecules came close to each other and had intermolecular side chain contacts. When two molecules had the intermolecular side chain contacts, the amyloid-β(29-42) tended to have intramolecular secondary structures, especially β-hairpin structures. The two molecules had intermolecular β-bridge structures by coming much closer at the second step of the dimerization process. Formation of these intermolecular β-bridge structures was induced by the β-hairpin structures. The intermolecular β-sheet structures elongated at the final step. Structures of the amyloid-β(29-42) in the monomer and dimer states are also shown with the free-energy landscapes, which were obtained by performing efficient sampling in the conformational space in our simulations.

  2. Scattering of plane SH waves by a circular-arc hill with a circular tunnel

    Institute of Scientific and Technical Information of China (English)

    LIANG Jian-wen(梁建文); LUO Hao(罗昊); Vincent W. Lee

    2004-01-01

    An analytical solution for scattering of incident SH waves by a circular-arc hill with a concentric circular tunnel was derived by Fourier-Bessel series expansion and auxiliary functions technique. The solution is reduced to solving a set of infinite linear algebraic equations finally. The accuracies of the numerical results are checked by the residual errors of boundary conditions with the truncation order increasing. The numerical results show that the existence and dimension of the tunnel have great effect on motion of the ground surface nearby and dynamic stress concentration of the tunnel.

  3. Stabilization of circular Rydberg atoms by circularly polarized infrared laser fields

    Energy Technology Data Exchange (ETDEWEB)

    Askeland, S.; Soerngaard, S. A.; Nepstad, R.; Foerre, M. [Department of Physics and Technology, University of Bergen, N-5007 Bergen (Norway); Pilskog, I. [Department of Physics and Technology, University of Bergen, N-5007 Bergen (Norway); Laboratoire de Chimie Physique - Matiere et Rayonnement, Universite Pierre et Marie Curie - CNRS (UMR 7614), F-75231 Paris Cedex 05 (France)

    2011-09-15

    The ionization dynamics of circular Rydberg states in strong circularly polarized infrared (800 nm) laser fields is studied by means of numerical simulations with the time-dependent Schroedinger equation. We find that at certain intensities, related to the radius of the Rydberg states, atomic stabilization sets in, and the ionization probability decreases as the intensity is further increased. Moreover, there is a strong dependence of the ionization probability on the rotational direction of the applied laser field, which can be understood from a simple classical analogy.

  4. Multipole Analysis of Circular Cylindircal Magnetic Systems

    Energy Technology Data Exchange (ETDEWEB)

    Selvaggi, Jerry P. [Rensselaer Polytechnic Inst., Troy, NY (United States)

    2005-12-01

    This thesis deals with an alternate method for computing the external magnetic field from a circular cylindrical magnetic source. The primary objective is to characterize the magnetic source in terms of its equivalent multipole distribution. This multipole distribution must be valid at points close to the cylindrical source and a spherical multipole expansion is ill-equipped to handle this problem; therefore a new method must be introduced. This method, based upon the free-space Green's function in cylindrical coordinates, is developed as an alternative to the more familiar spherical harmonic expansion. A family of special functions, called the toroidal functions or Q-functions, are found to exhibit the necessary properties for analyzing circular cylindrical geometries. In particular, the toroidal function of zeroth order, which comes from the integral formulation of the free-space Green's function in cylindrical coordinates, is employed to handle magnetic sources which exhibit circular cylindrical symmetry. The toroidal functions, also called Q-functions, are the weighting coefficients in a ''Fourier series-like'' expansion which represents the free-space Green's function. It is also called a toroidal expansion. This expansion can be directly employed in electrostatic, magnetostatic, and electrodynamic problems which exhibit cylindrical symmetry. Also, it is shown that they can be used as an alternative to the Elliptic integral formulation. In fact, anywhere that an Elliptic integral appears, one can replace it with its corresponding Q-function representation. A number of problems, using the toroidal expansion formulation, are analyzed and compared to existing known methods in order to validate the results. Also, the equivalent multipole distribution is found for most of the solved problems along with its corresponding physical interpretation. The main application is to characterize the external magnetic field due to a six

  5. Acoustic focusing by metal circular ring structure

    Science.gov (United States)

    Xia, Jian-Ping; Sun, Hong-Xiang

    2015-02-01

    We report an exotic acoustic focusing effect through a simple brass circular ring structure immersed in water. The acoustic waves can be focused on a prefect point at the centre of the ring structure. This exotic acoustic focusing phenomenon arises from the intrinsic modes in the ring structure at some special eigenfrequencies, which is essentially distinct from the previous studies originating from the negative refraction. The focusing effect is closely related to the size and shape of the ring structure. Interesting applications of the focusing mechanism in black box detectors in the sea and medical ultrasound treatment are further discussed.

  6. Chiral Surface Waves for Enhanced Circular Dichroism

    CERN Document Server

    Pellegrini, Giovanni; Celebrano, Michele; Duò, Lamberto; Biagioni, Paolo

    2016-01-01

    We present a novel chiral sensing platform that combines a one-dimensional photonic crystal design with a birefringent surface defect. The platform sustains simultaneous transverse electric and transverse magnetic surface modes, which are exploited to generate chiral surface waves. The present design provides homogeneous and superchiral fields of both handednesses over arbitrarily large areas in a wide spectral range, resulting in the enhancement of the circular dichroism signal by two orders of magnitude, thus paving the road toward the successful combination of surface-enhanced spectroscopies and electromagnetic superchirality.

  7. Future Circular Collider study week 2017

    CERN Document Server

    2017-01-01

    The annual meetings of the worldwide Future Circular Collider study (FCC) are major international events that review the progress in every domain which is relevant to develop feasible concepts for a next generation frontier particle accelerate based high-energy physics research infrastructure. This 3rd meeting is jointly organised by CERN and DESY. It is also the annual meeting of the EuroCirCol EC Horizon 2020 Research and Innovation Action project. Previous events took place in Washington and Rome. In 2017 the FCC Week will take place in Berlin, Germany between May 29 and June 2.

  8. Open circular billiards and the Riemann hypothesis.

    Science.gov (United States)

    Bunimovich, L A; Dettmann, C P

    2005-03-18

    A comparison of escape rates from one and from two holes in an experimental container (e.g., a laser trap) can be used to obtain information about the dynamics inside the container. If this dynamics is simple enough one can hope to obtain exact formulas. Here we obtain exact formulas for escape from a circular billiard with one and with two holes. The corresponding quantities are expressed as sums over zeros of the Riemann zeta function. Thus we demonstrate a direct connection between recent experiments and a major unsolved problem in mathematics, the Riemann hypothesis.

  9. Supercoiling induces denaturation bubbles in circular DNA.

    Science.gov (United States)

    Jeon, Jae-Hyung; Adamcik, Jozef; Dietler, Giovanni; Metzler, Ralf

    2010-11-12

    We present a theoretical framework for the thermodynamic properties of supercoiling-induced denaturation bubbles in circular double-stranded DNA molecules. We explore how DNA supercoiling, ambient salt concentration, and sequence heterogeneity impact on the bubble occurrence. An analytical derivation of the probability distribution to find multiple bubbles is derived and the relevance for supercoiled DNA discussed. We show that in vivo sustained DNA bubbles are likely to occur due to partial twist release in regions rich in weaker AT base pairs. Single DNA plasmid imaging experiments clearly demonstrate the existence of bubbles in free solution.

  10. Circular economy: from an institutional perspective

    Institute of Scientific and Technical Information of China (English)

    Lu Jingchao

    2007-01-01

    Circular economy (CE) has been put fonvard as an important environmental and resource strategy in China.Aiming at the high utilization rate of resources and reduction of pollutants,CE means to realize a shift of fundamental paradigm.With the mode of production and consumption from linear to recycling model,the promotion requires transdisciplinary researches which integrate technological,ecological,social-cultural and other sciences.The present study focuses on the implementation of circular economy from an institutional perspective.Institution acts as a crucial factor by providing incentives for technical innovation,leading investment orientation and determining policy effectiveness,etc.This paper mainly discusses about: firstly,the feature of institution,institutional changes and institutional innovation is articulated,together with eco-industrial park strategy,extended producer's responsibility and dematerialization principle as innovative institutional arrangements; secondly,as policy plays great role on institutional changing process,the mechanism of policy implementation is needed to be related; as a result,coevolution of institutions and policies is thus presented; at last,a pilot attempt is made to find out some operational avenues in accomplishment of CE through both theoretical and practical methodology,special resolutions are put forward after some projecting difficulties and dilemmas in China are described.

  11. The Circular Velocity Function of Group Galaxies

    CERN Document Server

    Abramson, Louis E; Benson, Andrew J; Kollmeier, Juna A; Mulchaey, John S

    2013-01-01

    A robust prediction of LCDM cosmology is the halo circular velocity function (CVF), a dynamical cousin of the halo mass function. However, the correspondence between theoretical and observed CVFs is uncertain: cluster galaxies are reported to exhibit a power-law CVF consistent with N-body simulations, but that of the field is distinctly Schechter-like, flattened relative to LCDM expectations at circular velocities v_c < 200 km/s. Groups offer a powerful probe of the role of environment in this discrepancy as they bridge the field and clusters. Here, we construct the CVF for a large, mass- and multiplicity-complete sample of group galaxies from the Sloan Digital Sky Survey. Using independent photometric v_c estimators, we find no transition from field- to LCDM-shaped CVF above v_c = 50 km/s as a function of group halo mass. All groups with 12.4 < log(M_halo/M_sun) < 15.1 (Local Group analogs to rich clusters) display similar Schechter-like CVFs that are marginally suppressed at low-v_c compared to tha...

  12. Remodelling fashion via circular economy driven luxury concept

    OpenAIRE

    Kuivanen, Pyry

    2016-01-01

    The thesis aimed to research circular economy’s intangible value in the global textile industry. The focus targeted on investigating, how luxury could become a positive input to a circular economy driven brand. The goal was to find and understand different perceptions of business concepts, customers and brands in order to build a notion of circular economy driven luxury fashion brand identity. Brand identity study was conducted by analyzing brands’ identities key facets. Scrutinizing mult...

  13. Fluorescence antibunching microscopy

    CERN Document Server

    Schwartz, Osip

    2011-01-01

    Breaking the diffraction limit in microscopy by utilizing quantum properties of light has been the goal of intense research in the recent years. We propose a quantum superresolution technique based on non-classical emission statistics of fluorescent markers, routinely used as contrast labels for bio-imaging. The technique can be readily implemented using standard fluorescence microscopy equipment.

  14. LEDs for fluorescence microscopy

    NARCIS (Netherlands)

    Young, I.T.; Garini, Y.; Dietrich, H.R.C.; Van Oel, W.; Liqui Lung, G.

    2004-01-01

    Traditional light sources for fluorescence microscopy have been mercury lamps, xenon lamps, and lasers. These sources have been essential in the development of fluorescence microscopy but each can have serious disadvantages: lack of near monochromaticity, heat generation, cost, lifetime of the light

  15. Fluorescence of atopic allergens

    NARCIS (Netherlands)

    Berrens, L.

    1967-01-01

    Purified atopic allergens have been found to emit flue fluorescence upon irradiation with ultraviolet light of 365 mμ wavelength. The maximum of fluorescence is in the region 445–490 mμ and the intensity is of the same order of magnitude for different atopic allergens. Synthetic model compounds, inc

  16. Boxed Permutation Pattern Matching

    DEFF Research Database (Denmark)

    Amit, Mika; Bille, Philip; Cording, Patrick Hagge;

    2016-01-01

    the goal is to only find the boxed subsequences of T that are order-isomorphic to P. This problem was introduced by Bruner and Lackner who showed that it can be solved in O(n3) time. Cho et al. [CPM 2015] gave an O(n2m) time algorithm and improved it to O(n2 logm). In this paper we present a solution...

  17. Logarithmic space and permutations

    DEFF Research Database (Denmark)

    Aubert, Clément; Seiller, Thomas

    2013-01-01

    In a recent work, Girard proposed a new and innovative approach to computational complexity based on the proofs-as-programs correspondence. In a previous paper, the authors showed how Girard's proposal succeeds in obtaining a new characterization of co-NL languages as a set of operators acting on...... on a Hilbert Space. In this paper, we extend this work by showing that it is also possible to define a set of operators characterizing the class L of logarithmic space languages....

  18. Circularly Polarized Attosecond Pulses and Molecular Atto-Magnetism

    CERN Document Server

    Bandrauk, Andre D

    2014-01-01

    Various schemes are presented for the generation of circularly polarized molecular high-order harmonic generation (MHOHG) from molecules. In particular it is shown that combinations of counter-rotating circularly polarized pulses produce the lowest frequency Coriolis forces with the highest frequency recollisions, thus generating new harmonics which are the source of circular polarized attosecond pulses (CPAPs). These can be used to generate circularly polarized electronic currents in molecular media on attosecond time scale. Molecular attosecond currents allow then for the generation of ultrashort magnetic field pulses on the attosecond time scale, new tools for molecular atto-magnetism (MOLAM).

  19. Circular orbits, Lyapunov stability and Manev-type forces

    CERN Document Server

    Blaga, Cristina

    2016-01-01

    In this article we study the stability in the sense of Lyapunov of the circular orbits in the generalized Manev two bodies problem. First, we explore the existence of the circular orbits and determine their radius. Then, using the first integrals of motion we build a positive definite function, known as a Lyapunov function. It's existence proves that the circular orbit is stable in the sense of Lyapunov. In the end, we consider several real systems of two bodies and compare the characteristics of the circular orbits in Newtonian and modified Manev gravitational field, arguing about our possibilities to observe the differences between the motion in these two fields.

  20. The Nature of Jets Evidence from Circular Polarization Observations

    CERN Document Server

    Wardle, J F C; Wardle, John F. C.; Homan, Daniel C.

    2000-01-01

    We review recent observations of circularly polarized radiation from AGN made with the VLBA and with the ATCA. We also discuss briefly the detections of the Galactic sources Sag A* and SS433. The origin of the circular polarization is still an open question in most cases, and we discuss four possible mechanisms. Detectable circular polarization is a common property of quasars, but not of radio galaxies, and is always associated with the compact core. There is growing evidence that the sign of the circular polarization stays the same over at least two or three decades in time, suggesting it is a fundamental property of the jet.

  1. The quantum spectra analysis of the circular billiards in wells

    Institute of Scientific and Technical Information of China (English)

    Zhang Yan-Hui; Zhang Li-Qin; Xu Xue-You; Ge Mei-Hua; Lin Sheng-Lu; Du Meng-Li

    2006-01-01

    We use a recently defined quantum spectral function and apply the method of closed-orbit theory to the 2D circular billiard system. The quantum spectra contain rich information of all classical orbits connecting two arbitrary points in the well. We study the correspondence between quantum spectra and classical orbits in the circular, 1/2 circular and 1/4 circular wells using the analytic and numerical methods. We find that the peak positions in the Fourier-transformed quantum spectra match accurately with the lengths of the classical orbits. These examples show evidently that semi-classical method provides a bridge between quantum and classical mechanics.

  2. Chemical construction and structural permutation of potent cytotoxin polytheonamide B: discovery of artificial peptides with distinct functions.

    Science.gov (United States)

    Itoh, Hiroaki; Inoue, Masayuki

    2013-07-16

    Polytheonamide B (1), isolated from the marine sponge Theonella swinhoei, is a posttranslationally modified ribosomal peptide (MW 5030 Da) that displays extraordinary cytotoxicity. Among its 48 amino acid residues, this peptide includes a variety D- and L-amino acids that do not occur in proteins, and the chiralities of these amino acids alternate in sequence. These structural features induce the formation of a stable β6.3-helix, giving rise to a tubular structure of over 4 nm in length. In the biological setting, this fold is believed to transport cations across the lipid bilayer through a pore, thereby acting as an ion channel. In this Account, we discuss the construction and structural permutations of this potent cytotoxin. First we describe the 161-step chemical construction of this unusual peptide 1. By developing a synthetic route to 1, we established the chemical basis for subsequent SAR studies to pinpoint the proteinogenic and nonproteinogenic building blocks within the molecule that confer its toxicity and channel function. Using fully synthetic 1, we generated seven analogues with point mutations, and studies of their activity revealed the importance of the N-terminal moiety. Next, we simplified the structure of 1 by substituting six amino acid residues of 1 to design a more synthetically accessible analogue 9. This dansylated polytheonamide mimic 9 was synthesized in 127 total steps, and we evaluated its function to show that it can emulate the toxic and ion channel activities of 1 despite its multiple structural modifications. Finally, we applied a highly automated synthetic route to 48-mer 9 to generate 13 substructures of 27-39-mers. The 37-mer 12 exhibited nanomolar level toxicity through a potentially distinct mode of action from 1 and 9. The SAR studies of polytheonamide B and the 21 artificial analogues have deepened our understanding of the precise structural requirements for the biological functions of 1. They have also led to the discovery of

  3. A new Nawaz-Enscore-Ham-based heuristic for permutation flow-shop problems with bicriteria of makespan and machine idle time

    Science.gov (United States)

    Liu, Weibo; Jin, Yan; Price, Mark

    2016-10-01

    A new heuristic based on the Nawaz-Enscore-Ham algorithm is proposed in this article for solving a permutation flow-shop scheduling problem. A new priority rule is proposed by accounting for the average, mean absolute deviation, skewness and kurtosis, in order to fully describe the distribution style of processing times. A new tie-breaking rule is also introduced for achieving effective job insertion with the objective of minimizing both makespan and machine idle time. Statistical tests illustrate better solution quality of the proposed algorithm compared to existing benchmark heuristics.

  4. Index to Nuclear Safety: a technical progress review by chronology, permuted title, and author. Vol. 11(1)--Vol. 18(6)

    Energy Technology Data Exchange (ETDEWEB)

    Cottrell, W.B.; Klein, A.

    1978-04-11

    This index to Nuclear Safety covers articles published in Nuclear Safety, Vol. 11, No. 1 (January-February 1970), through Vol. 18, No. 6 (November-December 1977). It is divided into three sections: a chronological list of articles (including abstracts) followed by a permuted-title (KWIC) index and an author index. Nuclear Safety, a bimonthly technical progress review prepared by the Nuclear Safety Information Center (NSIC), covers all safety aspects of nuclear power reactors and associated facilities. Over 450 technical articles published in Nuclear Safety in the last eight years are listed in this index.

  5. Index to Nuclear Safety: a technical progress review by chronology, permuted title, and author, Volume 18 (1) through Volume 22 (6)

    Energy Technology Data Exchange (ETDEWEB)

    Cottrell, W.B.; Passiakos, M.

    1982-06-01

    This index to Nuclear Safety covers articles published in Nuclear Safety, Volume 18, Number 1 (January-February 1977) through Volume 22, Number 6 (November-December 1981). The index is divided into three section: a chronological list of articles (including abstracts), a permuted-title (KWIC) index, and an author index. Nuclear Safety, a bimonthly technical progress review prepared by the Nuclear Safety Information Center, covers all safety aspects of nuclear power reactors and associated facilities. Over 300 technical articles published in Nuclear Safety in the last 5 years are listed in this index.

  6. Index to Nuclear Safety: a technical progress review by chrology, permuted title, and author, Volume 11(1) through Volume 20(6)

    Energy Technology Data Exchange (ETDEWEB)

    Cottrell, W B; Passiakos, M

    1980-06-01

    This index to Nuclear Safety, a bimonthly technical progress review, covers articles published in Nuclear Safety, Volume II, No. 1 (January-February 1970), through Volume 20, No. 6 (November-December 1979). It is divided into three sections: a chronological list of articles (including abstracts) followed by a permuted-title (KWIC) index and an author index. Nuclear Safety, a bimonthly technical progress review prepared by the Nuclear Safety Information Center (NSIC), covers all safety aspects of nuclear power reactors and associated facilities. Over 600 technical articles published in Nuclear Safety in the last ten years are listed in this index.

  7. A Combinatorial Theorem on Ordered Circular Sequences of n1 u's and n2 v's with Application to Kernel-perfect Graphs

    Institute of Scientific and Technical Information of China (English)

    Xiao-feng Guo; Yi Huang

    2003-01-01

    An ordered circular permutation S of u's and v's is called an ordered circular sequence of u's and v's. A kernel of a digraph G=(V,A) is an independent subset of V, say K, such that for any vertex vi in V\\K there is an arc from vi to a vertex vj in K. G is said to be kernel-perfect (KP) if every induced subgraph of G has a kernel. G is said to be kernel-perfect-critical (KPC) if G has no kernel but every proper induced subgraph of G has a kernel. The digraph G=(V,A)=(C)n(j1,j2,…,jk) is defined by: V(G)={0,1,...,n-1}, A(G)={uv | v-u≡ji(mod n) for 1≤i≤k}.In an earlier work, we investigated the digraph G=(C)n(1,±δd,±2d,±3d,...,±sd), denoted by G(n,d,r,s), where δ=1 for d>1 or δ=0 for d=1, and n,d,r,s are positive integers with (n,d)=r and n=mr, and gave some necessary and sufficient conditions for G(n,d,r,s) with r≥3 and s=1 to be KP or KPC.In this paper, we prove a combinatorial theorem on ordered circular sequences of n1 u's and n2 v's. By using the theorem, we prove that, if (n,d)=r≥2 and s≥2, then G(n,d,r,s) is a KP graph.

  8. Heavy ions at the Future Circular Collider

    CERN Document Server

    Dainese, A; Armesto, N; d'Enterria, D; Jowett, J M; Lansberg, J -P; Milhano, J G; Salgado, C A; Schaumann, M; van Leeuwen, M; Albacete, J L; Andronic, A; Antonioli, P; Apolinario, L; Bass, S; Beraudo, A; Bilandzic, A; Borsanyi, S; Braun-Munzinger, P; Chen, Z; Mendez, L Cunqueiro; Denicol, G S; Eskola, K J; Floerchinger, S; Fujii, H; Giubellino, P; Greiner, C; Grosse-Oetringhaus, J F; Ko, C -M; Kotko, P; Krajczar, K; Kutak, K; Laine, M; Liu, Y; Lombardo, M P; Luzum, M; Marquet, C; Masciocchi, S; Okorokov, V; Paquet, J -F; Paukkunen, H; Petreska, E; Pierog, T; Ploskon, M; Ratti, C; Rezaeian, A H; Riegler, W; Rojo, J; Roland, C; Rossi, A; Salam, G P; Sapeta, S; Schicker, R; Schmidt, C; Stachel, J; Uphoff, J; van Hameren, A; Watanabe, K; Xiao, B -W; Yuan, F; Zaslavsky, D; Zhou, K; Zhuang, P

    2016-01-01

    The Future Circular Collider (FCC) Study is aimed at assessing the physics potential and the technical feasibility of a new collider with centre-of-mass energies, in the hadron-hadron collision mode, seven times larger than the nominal LHC energies. Operating such machine with heavy ions is an option that is being considered in the accelerator design studies. It would provide, for example, Pb-Pb and p-Pb collisions at sqrt{s_NN} = 39 and 63 TeV, respectively, per nucleon-nucleon collision, with integrated luminosities above 30 nb^-1 per month for Pb-Pb. This is a report by the working group on heavy-ion physics of the FCC Study. First ideas on the physics opportunities with heavy ions at the FCC are presented, covering the physics of the Quark-Gluon Plasma, of gluon saturation, of photon-induced collisions, as well as connections with other fields of high-energy physics.

  9. Higher order diffractions from a circular disk

    Science.gov (United States)

    Marsland, Diane P.; Balanis, Constantine A.; Brumley, Stephen A.

    1987-12-01

    The backscattering from a circular disk is analyzed using the geometrical theory of diffraction. First-, second-, and third-order diffractions are included in the hard polarization analysis, while first-, second-, and third-order slope diffractions are included for soft polarization. Improvements in the prediction of the monostatic radar cross section over previous works are noted. For hard polarization, an excellent agreement is exhibited between experimental and theoretical results, while a very good agreement is noted for soft polarization. To further improve the soft polarization results for wide angles, a model for the creeping wave or circulating current on the edge of the disk is obtained and used to find an additional component of the backscattered field. The addition of this component significantly improves the results for wide angles, leading to excellent agreement for soft polarization also. An axial-caustic correction method using equivalent currents is also included in the analysis.

  10. 3D measurement using circular gratings

    Science.gov (United States)

    Harding, Kevin

    2013-09-01

    3D measurement using methods of structured light are well known in the industry. Most such systems use some variation of straight lines, either as simple lines or with some form of encoding. This geometry assumes the lines will be projected from one side and viewed from another to generate the profile information. But what about applications where a wide triangulation angle may not be practical, particularly at longer standoff distances. This paper explores the use of circular grating patterns projected from a center point to achieve 3D information. Originally suggested by John Caulfield around 1990, the method had some interesting potential, particularly if combined with alternate means of measurement from traditional triangulation including depth from focus methods. The possible advantages of a central reference point in the projected pattern may offer some different capabilities not as easily attained with a linear grating pattern. This paper will explore the pros and cons of the method and present some examples of possible applications.

  11. Circular arc snakes and kinematic surface generation

    KAUST Repository

    Barton, Michael

    2013-05-01

    We discuss the theory, discretization, and numerics of curves which are evolving such that part of their shape, or at least their curvature as a function of arc length, remains unchanged. The discretization of a curve as a smooth sequence of circular arcs is well suited for such purposes, and allows us to reduce evolution of curves to the evolution of a control point collection in a certain finite-dimensional shape space. We approach this evolution by a 2-step process: linearized evolution via optimized velocity fields, followed by optimization in order to exactly fulfill all geometric side conditions. We give applications to freeform architecture, including "rationalization" of a surface by congruent arcs, form finding and, most interestingly, non-static architecture. © 2013 The Author(s) Computer Graphics Forum © 2013 The Eurographics Association and Blackwell Publishing Ltd.

  12. Tangent hyperbolic circular frequency diverse array radars

    Directory of Open Access Journals (Sweden)

    Sarah Saeed

    2016-03-01

    Full Text Available Frequency diverse array (FDA with uniform frequency offset (UFO has been in spot light of research for past few years. Not much attention has been devoted to non-UFOs in FDA. This study investigates tangent hyperbolic (TH function for frequency offset selection scheme in circular FDAs (CFDAs. Investigation reveals a three-dimensional single-maximum beampattern, which promises to enhance system detection capability and signal-to-interference plus noise ratio. Furthermore, by utilising the versatility of TH function, a highly configurable type array system is achieved, where beampatterns of three different configurations of FDA can be generated, just by adjusting a single function parameter. This study further examines the utility of the proposed TH-CFDA in some practical radar scenarios.

  13. Low Latency High Throughout Circular Asynchronous FIFO

    Institute of Scientific and Technical Information of China (English)

    XIAO Yong; ZHOU Runde

    2008-01-01

    This paper describes a circular first in first out (FIFO) and its protocols which have a very low la-tency while still maintaining high throughput. Unlike the existing serial FIFOs based on asynchronous micro-pipelines, this FIFO's cells communicate directly with the input and output ports through a common bus, which effectively eliminates the data movement from the input port to the output port, thereby reducing the latency and the power consumption. Furthermore, the latency does not increase with the number of FIFO stages. Single-track asynchronous protocols are used to simplify the FIFO controller design, with only three C-gates needed in each cell controller, which substantially reduces the area. Simulations with the TSMC 0.25 Ijm CMOS logic process show that the latency of the 4-stage FIFO is less than 581 ps and the throughput is higher than 2.2 GHz.

  14. Transition from Poisson to circular unitary ensemble

    Indian Academy of Sciences (India)

    Vinayak; Akhilesh Pandey

    2009-09-01

    Transitions to universality classes of random matrix ensembles have been useful in the study of weakly-broken symmetries in quantum chaotic systems. Transitions involving Poisson as the initial ensemble have been particularly interesting. The exact two-point correlation function was derived by one of the present authors for the Poisson to circular unitary ensemble (CUE) transition with uniform initial density. This is given in terms of a rescaled symmetry breaking parameter Λ. The same result was obtained for Poisson to Gaussian unitary ensemble (GUE) transition by Kunz and Shapiro, using the contour-integral method of Brezin and Hikami. We show that their method is applicable to Poisson to CUE transition with arbitrary initial density. Their method is also applicable to the more general ℓ CUE to CUE transition where CUE refers to the superposition of ℓ independent CUE spectra in arbitrary ratio.

  15. THE FLOW IN ROTATING CURVED CIRCULAR PIPE

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The combined effects of the system rotation (Coriolis force) and curvature (centrifugal force) on the flow in rotating curved circular pipe with small curvature are examined by perturbation method. A second-order perturbation solution is presented. The secondary flow structure and the primary axial velocity distributions are studied in detail. The loops of the secondary flow are more complex than those in a curved pipe without rotation or a rotating straight pipe. Its numbers depend on the body force ratio F which represents the ratio of the Coriolis to the centrifugal force. The maximum of the axial velocity is pushed to either outer bend or inner bend, which is also determined by F. The results are confirmed by the results of other authors who studied the same problem by different methods.

  16. The circular velocity function of group galaxies

    Energy Technology Data Exchange (ETDEWEB)

    Abramson, Louis E. [Department of Astronomy and Astrophysics and Kavli Institute for Cosmological Physics, The University of Chicago, 5640 South Ellis Avenue, Chicago, IL 60637 (United States); Williams, Rik J.; Benson, Andrew J.; Kollmeier, Juna A.; Mulchaey, John S., E-mail: labramson@uchicago.edu [The Observatories of the Carnegie Institution for Science, 813 Santa Barbara Street, Pasadena, CA 91101 (United States)

    2014-09-20

    A robust prediction of ΛCDM cosmology is the halo circular velocity function (CVF), a dynamical cousin of the halo mass function. The correspondence between theoretical and observed CVFs is uncertain, however: cluster galaxies are reported to exhibit a power-law CVF consistent with N-body simulations, but that of the field is distinctly Schechter-like, flattened compared to ΛCDM expectations at circular velocities v {sub c} ≲ 200 km s{sup –1}. Groups offer a powerful probe of the role environment plays in this discrepancy as they bridge the field and clusters. Here, we construct the CVF for a large, mass- and multiplicity-complete sample of group galaxies from the Sloan Digital Sky Survey. Using independent photometric v {sub c} estimators, we find no transition from field to ΛCDM-shaped CVF above v {sub c} = 50 km s{sup –1} as a function of group halo mass. All groups with 12.4 ≲ log M {sub halo}/M {sub ☉} ≲ 15.1 (Local Group analogs to rich clusters) display similar Schechter-like CVFs marginally suppressed at low v {sub c} compared to that of the field. Conversely, some agreement with N-body results emerges for samples saturated with late-type galaxies, with isolated late-types displaying a CVF similar in shape to ΛCDM predictions. We conclude that the flattening of the low-v {sub c} slope in groups is due to their depressed late-type fractions—environment affecting the CVF only to the extent that it correlates with this quantity—and that previous cluster analyses may suffer from interloper contamination. These results serve as useful benchmarks for cosmological simulations of galaxy formation.

  17. Twisting Fluorescence through Extrinsic Chiral Antennas.

    Science.gov (United States)

    Yan, Chen; Wang, Xiaolong; Raziman, T V; Martin, Olivier J F

    2017-03-22

    Plasmonic antennas and planar structures have been undergoing intensive developments in order to control the scattering and absorption of light. One specific class, extrinsic chiral surfaces, that does not possess 2-fold rotational symmetry exhibits strong asymmetric transmission for different circular polarizations under obliquely incident illumination. In this work, we show that the design of those surfaces can be optimized with complex multipolar resonances in order to twist the fluorescence emission from nearby molecules. While this emission is usually dipolar and linearly polarized, the interaction with these resonances twists it into a multipolar radiation pattern with opposite helicity in different directions. The proposed structure maximizes this effect and provides control over the polarization of light. Splitting of left- and right-handed circularly polarized light is experimentally obtained in the backward direction. These results highlight the intricate interplay between the near-field absorption and the far-field scattering of a plasmonic nanostructure and are further used for modifying the emission of incoherent quantum sources. Our finding can potentially lead to the development of polarization- and angle-resolved ultracompact optical devices.

  18. Fluorescence and Spectral Imaging

    Directory of Open Access Journals (Sweden)

    Ralph S. DaCosta

    2007-01-01

    Full Text Available Early identification of dysplasia remains a critical goal for diagnostic endoscopy since early discovery directly improves patient survival because it allows endoscopic or surgical intervention with disease localized without lymph node involvement. Clinical studies have successfully used tissue autofluorescence with conventional white light endoscopy and biopsy for detecting adenomatous colonic polyps, differentiating benign hyperplastic from adenomas with acceptable sensitivity and specificity. In Barrett's esophagus, the detection of dysplasia remains problematic because of background inflammation, whereas in the squamous esophagus, autofluorescence imaging appears to be more dependable. Point fluorescence spectroscopy, although playing a crucial role in the pioneering mechanistic development of fluorescence endoscopic imaging, does not seem to have a current function in endoscopy because of its nontargeted sampling and suboptimal sensitivity and specificity. Other point spectroscopic modalities, such as Raman spectroscopy and elastic light scattering, continue to be evaluated in clinical studies, but still suffer the significant disadvantages of being random and nonimaging. A recent addition to the fluorescence endoscopic imaging arsenal is the use of confocal fluorescence endomicroscopy, which provides real-time optical biopsy for the first time. To improve detection of dysplasia in the gastrointestinal tract, a new and exciting development has been the use of exogenous fluorescence contrast probes that specifically target a variety of disease-related cellular biomarkers using conventional fluorescent dyes and novel potent fluorescent nanocrystals (i.e., quantum dots. This is an area of great promise, but still in its infancy, and preclinical studies are currently under way.

  19. Highly thermostable fluorescent proteins

    Science.gov (United States)

    Bradbury, Andrew M.; Waldo, Geoffrey S.; Kiss, Csaba

    2011-03-22

    Thermostable fluorescent proteins (TSFPs), methods for generating these and other stability-enhanced proteins, polynucleotides encoding such proteins, and assays and method for using the TSFPs and TSFP-encoding nucleic acid molecules are provided. The TSFPs of the invention show extremely enhanced levels of stability and thermotolerance. In one case, for example, a TSFP of the invention is so stable it can be heated to 99.degree. C. for short periods of time without denaturing, and retains 85% of its fluorescence when heated to 80.degree. C. for several minutes. The invention also provides a method for generating stability-enhanced variants of a protein, including but not limited to fluorescent proteins.

  20. Thermohydraulics of Turbulent Flow Through Heat Exchanger Tubes Fitted with Circular-rings and Twisted Tapes

    Institute of Scientific and Technical Information of China (English)

    Smith Eiamsa-ard; Vichan Kongkaitpaiboon; Kwanchai Nanan

    2013-01-01

    The influences of circular-ring turbulators (CRT) and twisted tape (TT) swirl generators on the heat transfer enhancement,pressure drop and thermal performance factor characteristics in a round tube are reported.The circular-ring turbulators were individually employed and together with the twisted tape swirl generators in the heated section of the tube.Three different pitch ratios (l/D =1.0,1.5,and 2.0) of the CRT and three different twist ratios (y/W=3,4,and 5) of the TT were introduced.The experiments were conducted using air as the working fluid under a uniform wall heat flux condition,for the Reynolds number between 6000 and 20000.The experimental resuits reveal that the heat transfer rate,friction factor and thermal performance factor of the combined CRT and TT are considerably higher than those of CRT alone.For the range examined,the ìncreases of mean Nusselt number,friction factor and thermal performance,in the tube equipped with combined devices,respectively,are 25.8%,82.8% and 6.3% over those in the tube with the CRT alone.The highest thermal performance factor of 1.42 is found for the combined device consisting of the CRT with l/D =1.0 and TT with y/W=3.The correlations of the Nusselt number,friction factor and thermal performance factor of the tubes with combined devices are also developed in terms of Reynolds number,Prandtl number,twist ratio and pitch ratio.

  1. Flow-induced vibration of circular cylindrical structures

    Energy Technology Data Exchange (ETDEWEB)

    Chen, S.S.

    1985-06-01

    This report summarizes the flow-induced vibration of circular cylinders in quiescent fluid, axial flow, and crossflow, and applications of the analytical methods and experimental data in design evaluation of various system components consisting of circular cylinders. 219 figs., 30 tabs. (JDB)

  2. THE PROJECTIVE PLANE CROSSING NUMBERS OF CIRCULAR GRAPHS

    Institute of Scientific and Technical Information of China (English)

    Dengju MA; Han REN

    2008-01-01

    The authors give an upper bound for the projective plane crossing number of a circular graph. Also, the authors prove the projective plane crossing numbers of circular graph C (8,3) and C (9,3) are 2 and 1, respectively.

  3. Role of Food Logistics Management in a circular economy

    NARCIS (Netherlands)

    Bloemhof-Ruwaard, J.M.; Groot, J.J.; Snels, J.C.M.A.

    2016-01-01

    In this paper we will discuss the role of food logistics management in a circular economy. Specific pillars in Circular Economy such as Closed Loop supply Chain management and Industrial Ecology will be discussed. Apart from a research agenda, we will provide exemplary cases in practice showing the

  4. Structures of generalized 3-circular projections for symmetric norms

    Indian Academy of Sciences (India)

    A B Abubaker; S Dutta

    2016-05-01

    Recently several authors investigated structures of generalized bi-circular projections in spaces where the descriptions of the group of surjective isometries are known. Following the same idea in this paper we give complete descriptions of generalized 3-circular projections for symmetric norms on ${\\mathbb C}^n$ and ${\\mathbb M}_{m \\times n}({\\mathbb C})$.

  5. Calculations of circular waveguide with a rectangular metal insert.

    Directory of Open Access Journals (Sweden)

    Yu. K. Sydoruk

    2010-05-01

    Full Text Available Calculated and analyzed the basic parameters of electromagnetic wave in a circular waveguide with a rectangular metal plate in the following cases: when  the circular waveguide without metal plate for a H11 wave of subcritical, critical and supercritical. For calculations was used a finite element method and Ansoft HFSS program.

  6. Similarities between circular polarization in Galactic jet sources and AGN

    NARCIS (Netherlands)

    Macquart, JP; Wu, K; Hannikainen, DC; Sault, RJ; Jauncey, DL

    2003-01-01

    We compare the observational properties of the circular polarization in Galactic jet sources with that observed in AGN, and outline the constraints they place on the mechanism responsible for the circular polarization. We also discuss the implications of the time scale of polarization variations on

  7. GRAPHS WHOSE CIRCULAR CLIQUE NUMBER EQUAL THE CLIQUE NUMBER

    Institute of Scientific and Technical Information of China (English)

    XU Baogang; ZHOU Xinghe

    2005-01-01

    The circular clique number of a graph G is the maximum fractional k/d such that Gkd admits a homomorphism to G. In this paper, we give some sufficient conditions for graphs whose circular clique number equal the clique number, we also characterize the K1,3-free graphs and planar graphs with the desired property.

  8. Color image encryption based on color blend and chaos permutation in the reality-preserving multiple-parameter fractional Fourier transform domain

    Science.gov (United States)

    Lang, Jun

    2015-03-01

    In this paper, we propose a novel color image encryption method by using Color Blend (CB) and Chaos Permutation (CP) operations in the reality-preserving multiple-parameter fractional Fourier transform (RPMPFRFT) domain. The original color image is first exchanged and mixed randomly from the standard red-green-blue (RGB) color space to R‧G‧B‧ color space by rotating the color cube with a random angle matrix. Then RPMPFRFT is employed for changing the pixel values of color image, three components of the scrambled RGB color space are converted by RPMPFRFT with three different transform pairs, respectively. Comparing to the complex output transform, the RPMPFRFT transform ensures that the output is real which can save storage space of image and convenient for transmission in practical applications. To further enhance the security of the encryption system, the output of the former steps is scrambled by juxtaposition of sections of the image in the reality-preserving multiple-parameter fractional Fourier domains and the alignment of sections is determined by two coupled chaotic logistic maps. The parameters in the Color Blend, Chaos Permutation and the RPMPFRFT transform are regarded as the key in the encryption algorithm. The proposed color image encryption can also be applied to encrypt three gray images by transforming the gray images into three RGB color components of a specially constructed color image. Numerical simulations are performed to demonstrate that the proposed algorithm is feasible, secure, sensitive to keys and robust to noise attack and data loss.

  9. Wildland Arson as Clandestine Resource Management: A Space-Time Permutation Analysis and Classification of Informal Fire Management Regimes in Georgia, USA

    Science.gov (United States)

    Coughlan, Michael R.

    2016-05-01

    Forest managers are increasingly recognizing the value of disturbance-based land management techniques such as prescribed burning. Unauthorized, "arson" fires are common in the southeastern United States where a legacy of agrarian cultural heritage persists amidst an increasingly forest-dominated landscape. This paper reexamines unauthorized fire-setting in the state of Georgia, USA from a historical ecology perspective that aims to contribute to historically informed, disturbance-based land management. A space-time permutation analysis is employed to discriminate systematic, management-oriented unauthorized fires from more arbitrary or socially deviant fire-setting behaviors. This paper argues that statistically significant space-time clusters of unauthorized fire occurrence represent informal management regimes linked to the legacy of traditional land management practices. Recent scholarship has pointed out that traditional management has actively promoted sustainable resource use and, in some cases, enhanced biodiversity often through the use of fire. Despite broad-scale displacement of traditional management during the 20th century, informal management practices may locally circumvent more formal and regionally dominant management regimes. Space-time permutation analysis identified 29 statistically significant fire regimes for the state of Georgia. The identified regimes are classified by region and land cover type and their implications for historically informed disturbance-based resource management are discussed.

  10. Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle.

    Directory of Open Access Journals (Sweden)

    Dirk Dolle

    Full Text Available Enhancers have been described to evolve by permutation without changing function. This has posed the problem of how to predict enhancer elements that are hidden from alignment-based approaches due to the loss of co-linearity. Alignment-free algorithms have been proposed as one possible solution. However, this approach is hampered by several problems inherent to its underlying working principle. Here we present a new approach, which combines the power of alignment and alignment-free techniques into one algorithm. It allows the prediction of enhancers based on the query and target sequence only, no matter whether the regulatory logic is co-linear or reshuffled. To test our novel approach, we employ it for the prediction of enhancers across the evolutionary distance of ~450Myr between human and medaka. We demonstrate its efficacy by subsequent in vivo validation resulting in 82% (9/11 of the predicted medaka regions showing reporter activity. These include five candidates with partially co-linear and four with reshuffled motif patterns. Orthology in flanking genes and conservation of the detected co-linear motifs indicates that those candidates are likely functionally equivalent enhancers. In sum, our results demonstrate that the proposed principle successfully predicts mutated as well as permuted enhancer regions at an encouragingly high rate.

  11. Wildland Arson as Clandestine Resource Management: A Space-Time Permutation Analysis and Classification of Informal Fire Management Regimes in Georgia, USA.

    Science.gov (United States)

    Coughlan, Michael R

    2016-05-01

    Forest managers are increasingly recognizing the value of disturbance-based land management techniques such as prescribed burning. Unauthorized, "arson" fires are common in the southeastern United States where a legacy of agrarian cultural heritage persists amidst an increasingly forest-dominated landscape. This paper reexamines unauthorized fire-setting in the state of Georgia, USA from a historical ecology perspective that aims to contribute to historically informed, disturbance-based land management. A space-time permutation analysis is employed to discriminate systematic, management-oriented unauthorized fires from more arbitrary or socially deviant fire-setting behaviors. This paper argues that statistically significant space-time clusters of unauthorized fire occurrence represent informal management regimes linked to the legacy of traditional land management practices. Recent scholarship has pointed out that traditional management has actively promoted sustainable resource use and, in some cases, enhanced biodiversity often through the use of fire. Despite broad-scale displacement of traditional management during the 20th century, informal management practices may locally circumvent more formal and regionally dominant management regimes. Space-time permutation analysis identified 29 statistically significant fire regimes for the state of Georgia. The identified regimes are classified by region and land cover type and their implications for historically informed disturbance-based resource management are discussed.

  12. Fluorescent cyanine probe for DNA detection and cellular imaging

    Science.gov (United States)

    Zheng, Yong-Chao; Zheng, Mei-Ling; Zhao, Zhen-Sheng; Duan, Xuan-Ming

    2014-03-01

    In our study, two carbazole-based cyanines, 3,6-bis[2-(1-methylpyridinium)vinyl]-9-methyl carbazole diiodide (A) and 6,6'-bis[2-(1-methylpyridinium)vinyl]-bis(9-methyl-carbazol-3yl)methane diiodide (B) were synthesized and employed as light-up probes for DNA and cell imaging. Both of the cyanine probes possess a symmetric structure and bis-cationic center. The obvious induced circular dichroism signals in circular dichroism spectra reveal that the molecules can specifically interact with DNA. Strong fluorescence enhancement is observed when these two cyanines are bound to DNA. These cyanine probes show high binding affinity to oligonucleotides but different binding preferences to various secondary structures. Confocal microscopy images of fixed cell stained by the probes exhibit strong brightness and high contrast in nucleus with a very low cytoplasmic background.

  13. Detection of circular polarization in light scattered from photosynthetic microbes

    CERN Document Server

    Sparks, William B; Germer, Thomas A; Chen, Feng; DasSarma, Shiladitya; DasSarma, Priya; Robb, Frank T; Manset, Nadine; Kolokolova, Ludmilla; Reid, Neill; Macchetto, F Duccio; Martin, William; 10.1073/pnas.0810215106

    2009-01-01

    The identification of a universal biosignature that could be sensed remotely is critical to the prospects for success in the search for life elsewhere in the universe. A candidate universal biosignature is homochirality, which is likely to be a generic property of all biochemical life. Due to the optical activity of chiral molecules, it has been hypothesized that this unique characteristic may provide a suitable remote sensing probe using circular polarization spectroscopy. Here, we report the detection of circular polarization in light scattered by photosynthetic microbes. We show that the circular polarization appears to arise from circular dichroism of the strong electronic transitions of photosynthetic absorption bands. We conclude that circular polarization spectroscopy could provide a powerful remote sensing technique for generic life searches.

  14. TRAJECTORY GENERATION AND CONTROL FOR NON-CIRCULAR CNC TURNING

    Institute of Scientific and Technical Information of China (English)

    JIANG Simin; YAN Han; WANG Xiankui

    2008-01-01

    A trajectory generation method which is based on NURBS interpolation is studied to improve the fitting accuracy and smoothness of non-circular cross section and obtain higher accuracy of the final non-circular profile control. After using the NURBS, the most optimized and smooth trajectory for the linear actuator can be obtained. For the purpose of machining the non-circular cross section by CNC turning, the fast response linear actuator has been used. The control algorithm which is compound control of proportional-integral-differential (PID) and iterative learning control has been developed for non-circular profile generation. By using the NURBS interpolation and the compound control of PID and iterative learning control, the final motion accuracy of linear actuator has been improved, therefore, the machining accuracy of the non-circular turning can be improved.

  15. Conversion from linear to circular polarization in FPGA

    CERN Document Server

    Das, Koyel; Keller, R; Tuccari, G

    2011-01-01

    Context: Radio astronomical receivers are now expanding their frequency range to cover large (octave) fractional bandwidths for sensitivity and spectral flexibility, which makes the design of good analogue circular polarizers challenging. Better polarization purity requires a flatter phase response over increasingly wide bandwidth, which is most easily achieved with digital techniques. They offer the ability to form circular polarization with perfect polarization purity over arbitrarily wide fractional bandwidths, due to the ease of introducing a perfect quadrature phase shift. Further, the rapid improvements in field programmable gate arrays provide the high processing power, low cost, portability and reconfigurability needed to make practical the implementation of the formation of circular polarization digitally. Aims: Here we explore the performance of a circular polarizer implemented with digital techniques. Methods: We designed a digital circular polarizer in which the intermediate frequency signals from...

  16. Nearest Neighbor Estimates of Entropy for Multivariate Circular Distributions

    Directory of Open Access Journals (Sweden)

    Neeraj Misra

    2010-05-01

    Full Text Available In molecular sciences, the estimation of entropies of molecules is important for the understanding of many chemical and biological processes. Motivated by these applications, we consider the problem of estimating the entropies of circular random vectors and introduce non-parametric estimators based on circular distances between n sample points and their k th nearest neighbors (NN, where k (≤ n – 1 is a fixed positive integer. The proposed NN estimators are based on two different circular distances, and are proven to be asymptotically unbiased and consistent. The performance of one of the circular-distance estimators is investigated and compared with that of the already established Euclidean-distance NN estimator using Monte Carlo samples from an analytic distribution of six circular variables of an exactly known entropy and a large sample of seven internal-rotation angles in the molecule of tartaric acid, obtained by a realistic molecular-dynamics simulation.

  17. Administrative Circular No. 26 (Rev.10) - Recognition of merit

    CERN Multimedia

    2014-01-01

    Administrative Circular No. 26 (Rev. 10) entitled “Recognition of Merit”, approved by the Director-General following discussion at the Standing Concertation Committee meeting of 5 December 2013 and entering into force on 1 January 2014, is available on the intranet site of the Human Resources Department (see here).   This circular is applicable to staff members. It cancels and replaces Administrative Circular No. 26 (Rev. 9) entitled “Recognition of Merit” of December 2011. The circular was revised in order to take into account the work performed in the framework of an elective mandate during the exercise of merit recognition of staff members. In addition, the circular was revised to provide that, in the case of staff members on special leave for professional reasons for a period equal to or longer than half a year, it will no longer be possible to grant an exceptional advancement. Department Head Office HR Department

  18. Circular Interpolation Algorithms of 5-Axis Simultaneous CNC System

    Institute of Scientific and Technical Information of China (English)

    ZHENG Kuijing; SHANG Bo

    2006-01-01

    Spatial circular arc can be machined conveniently by a 5-axis NC machine tool. Based on the data sampling method, circular interpolation in two-dimensional plane is discussed briefly. The key is to solve the problem of circular center expressed in the workpiece coordinate system by means of the transformation matrix. Circular interpolation in three-dimensional space is analyzed in detail. The method of undetermined coefficient is used to solve the center of the spatial circle and the method of coordinate transformation is used to transform the spatial circle into the XY_plane. Circular arc in three-dimensional space can be machined by the positional 5-axis machining and the conical surface can be machined by the continuous 5-axis machining. The velocity control is presented to avoid the feedrate fluctuation. The interpolation algorithms are tested by a simulation example and the interpolation algorithms are proved feasible. The algorithms are applied to the 5-axis CNC system software.

  19. Experimental evidence for formation mechanism of regular circular fringes

    Science.gov (United States)

    Wang, Y.; Zhu, R.; Wang, G.; Wang, P.; Li, H.; Zhang, W.; Ren, G.

    2016-10-01

    Laser active suppressing jamming is one of the most effective technologies to cope with optoelectric imaging systems. In the process of carrying out laser disturbing experiment, regular circular fringes often appeared on the detector, besides laser spot converging by optical system. First of all, the formation of circular fringes has been experimentally investigated by using a simple converging lens to replace the complex optical system. Moreover, circular fringes have been simulated based on the interference theory of coherent light. The coherence between the experimental phenomena and the simulated results showed that the formation mechanism of regular circular fringes was the interference effect between reflected light by back surface of lens and directly refractive light on the detector. At last, the visibility of circular fringes has been calculated from 0.05 to 0.22 according to the current plating standard of lens surface and manufacture technique of optoelectric detector.

  20. Structural alterations of human serum albumin caused by glycative and oxidative stressors revealed by circular dichroism analysis.

    Science.gov (United States)

    Monacelli, Fiammetta; Storace, Daniela; D'Arrigo, Cristina; Sanguineti, Roberta; Borghi, Roberta; Pacini, Davide; Furfaro, Anna L; Pronzato, Maria A; Odetti, Patrizio; Traverso, Nicola

    2013-01-01

    The aim of this work was to evaluate the ability of oxidative and glycative stressors to modify properties of human serum albumin (HSA) by analyzing markers of glycation (pentosidine) and oxidation (advanced oxidative protein products (AOPPs)) and assessing fluorescence and circular dichroism. HSA was incubated for up to 21 days with ribose, ascorbic acid (AA) and diethylenetriamine pentacetate (DTPA) in various combinations in order to evaluate influences of these substances on the structure of HSA. Ribose was included as a strong glycative molecule, AA as a modulator of oxidative stress, and DTPA as an inhibitor of metal-catalyzed oxidation. Ribose induced a significant increase in pentosidine levels. AA and DTPA prevented the accumulation of pentosidine, especially at later time points. Ribose induced a mild increase in AOPP formation, while AA was a strong inducer of AOPP formation. Ribose, in combination with AA, further increased the formation of AOPP. DTPA prevented the AA-induced generation of AOPP. Ribose was also a potent inducer of fluorescence at 335nm ex/385nm em, which is typical of pentosidine. AA and DTPA prevented this fluorescence. Circular dichroism showed complex results, in which AA and DTPA were strong modifiers of the percentages of the alpha-helical structure of HSA, while ribose affected the structure of HSA only at later time points.

  1. Circular SAR Optimization Imaging Method of Buildings

    Directory of Open Access Journals (Sweden)

    Wang Jian-feng

    2015-12-01

    Full Text Available The Circular Synthetic Aperture Radar (CSAR can obtain the entire scattering properties of targets because of its great ability of 360° observation. In this study, an optimal orientation of the CSAR imaging algorithm of buildings is proposed by applying a combination of coherent and incoherent processing techniques. FEKO software is used to construct the electromagnetic scattering modes and simulate the radar echo. The FEKO imaging results are compared with the isotropic scattering results. On comparison, the optimal azimuth coherent accumulation angle of CSAR imaging of buildings is obtained. Practically, the scattering directions of buildings are unknown; therefore, we divide the 360° echo of CSAR into many overlapped and few angle echoes corresponding to the sub-aperture and then perform an imaging procedure on each sub-aperture. Sub-aperture imaging results are applied to obtain the all-around image using incoherent fusion techniques. The polarimetry decomposition method is used to decompose the all-around image and further retrieve the edge information of buildings successfully. The proposed method is validated with P-band airborne CSAR data from Sichuan, China.

  2. SEAMLESS TECHNOLOGY ON CIRCULAR KNITTING MACHINES

    Directory of Open Access Journals (Sweden)

    CRETU Viorica

    2014-05-01

    Full Text Available With industrial progress, the advancements in garment manufacturing have evolved from cut & sew to complete garment knitting, which produces one entire garment without sewing or linking process. Seamless knitting technology is similar to sock manufacture, the specialized circular knitting machines producing 3 dimensional garments with no side seams, with the waistband integrated with body of the garment and with knitted washing instructions and logos. The paper starts by presenting the main advantages of seamless garments but also some limitations because the technology. Because for a seamless garment, which is realized as a knitted tub, is very important to ensure the required final chest size, it was presented the main components involved: the knitting machine, the garment design and the yarns used. The knitting machines, beside the values of diameters and gauges with a great impact on the chest size, are characterized by a very innovative and complex construction. The design of a seamless garment is fundamental different compared to garments produced on a traditional way because the designer must to work backwards from a finished garment to create the knitting programme that will ultimately give the correct finished size. On the end of the paper it was presented some of the applications of the seamless products that cover intimate apparel and other bodywear, outwear, activewear and functional sportswear, upholstery, industrial, automotive and medical textiles.

  3. Future Circular Colliders Study, Kickoff Meeting

    CERN Document Server

    2014-01-01

    This meeting is the starting point of a five-year international design study called “Future Circular Colliders” (FCC) with emphasis on a hadron collider with a centre-of-mass energy of the order of 100 TeV in a new 80-100 km tunnel as a long-term goal. The design study includes a 90-400 GeV lepton collider, seen as a potential intermediate step. It also examines a lepton-hadron collider option. The international kick-off meeting for the FCC design study will be held at the University of Geneva, Unimail site, on 12–15 February 2014. The scope of this meeting will be to discuss the main study topics and to prepare the groundwork for the establishment of international collaborations and future studies. The formal part of the meeting will start at noon on Wednesday 12 February and last until noon on Friday 14 February. It will be followed by break-out sessions on the various parts of the project on the Friday afternoon, with summary sessions until noon on Saturday 15 February.

  4. Challenges for highest energy circular colliders

    CERN Document Server

    Benedikt, M; Wenninger, J; Zimmermann, F

    2014-01-01

    A new tunnel of 80–100 km circumference could host a 100 TeV centre-of-mass energy-frontier proton collider (FCC-hh/VHE-LHC), with a circular lepton collider (FCCee/TLEP) as potential intermediate step, and a leptonhadron collider (FCC-he) as additional option. FCC-ee, operating at four different energies for precision physics of the Z, W, and Higgs boson and the top quark, represents a significant push in terms of technology and design parameters. Pertinent R&D efforts include the RF system, topup injection scheme, optics design for arcs and final focus, effects of beamstrahlung, beam polarization, energy calibration, and power consumption. FCC-hh faces other challenges, such as high-field magnet design, machine protection and effective handling of large synchrotron radiation power in a superconducting machine. All these issues are being addressed by a global FCC collaboration. A parallel design study in China prepares for a similar, but smaller collider, called CepC/SppC.

  5. Power performance of circular piezoelectric diaphragm generators

    Institute of Scientific and Technical Information of China (English)

    Kehong TANG; Junwu KAN; Taijiang PENG; Zhigang YANG; Guangming CHENG

    2008-01-01

    Energy generation performance of a piezo-electric generator depends mainly on several elements such as the structural style, boundary conditions, geo-metry parameters, materials, vibration-source frequency, and external load. To obtain the optimal energy-harvest-ing device, the Raleigh method is used to establish the analysis model of circular piezoelectric composite dia-phragms. Simply supported and clamped boundary con-ditions were considered. The relationships between the output power and the structural parameters of piezo-electric composite diaphragms, and the external load res-istance and frequency were shown. Given the correlative material parameters and boundary conditions, the output power, using structural parameters, external load, or vibrating frequency as variables, can be calculated. Simulation results show that there are optimal structural parameters and load for a composite diaphragm to achieve the maximum output power. A piezoelectric dia-phragm generator with given dimensions tends to achieve higher output power under clamped boundary conditions than that under simply supported boundary conditions.

  6. Diabatic flow boiling in circular transparent microchannels

    Science.gov (United States)

    Silvério, V.; Moreira, A. L. N.

    2012-11-01

    The horizontally assembled circular microchannel (Dh= 543μm, LHT = 60mm) made of transparent borosilicate glass is kept under constant wall heat flux conditions by means of a transparent metallic thin film deposit at the channel external wall as in Silvério and Moreira [1]. Heat transfer and pressure drop measurements are achieved by measuring the temperature and pressure at the channel inlet and outlet. Temperature is also measured along the channel outer wall. Experiments are carried with two different fluids, ethanol and methanol. Inlet liquid subcooling is of 297K, mass fluxes, G, up to 689kg.m-2.s-1 and imposed heat fluxes, q"s, up to 12.5W.cm-2 at ΔTsub from 0.8 to 50K. Synchronized high-speed visualization and microscope optics are used to determine dominant two-phase flow patterns and characterize hydrodynamic instabilities. Vapor qualities, χ, of -0.1 (indicating a subcooled liquid state) to 0.5 are under investigation. Semi-periodic variation of the flow patterns is noticeable for different flow conditions.

  7. Administrative Circular No. 14 (Rev. 2)

    CERN Multimedia

    HR Department

    2007-01-01

    The HR Department wishes to draw the attention of members of the personnel to a number of amendments to Administrative Circular No. 14 (Rev. 2) entitled "Protection of members of the personnel against the financial consequences of illness, accident and disability" which came into force on 1st July 2006 (cf. Weekly Bulletin of 14 and 21 August 2006). Occupational Accident Declaration Form (HS50) https://cern.ch/service-procedures/AdminMan/Forms/HS50E.doc •\tIt must be completed within 10 working days of the date on which the accident occurred (§ 29.2.1), unless the person concerned is materially unable to meet this deadline. • The completed formula must be accompanied by a medical certificate giving details of any bodily injuries resulting from the accident (Annex 1, § 5). The medical certificate must be obtained from the doctor who has been consulted for that purpose. Benefits resulting from illnesses and accidents Medical treatment will cease to be reimbursed under ...

  8. Drops with non-circular footprints

    Science.gov (United States)

    Ravazzoli, Pablo D.; González, Alejandro G.; Diez, Javier A.

    2016-04-01

    In this paper we study the morphology of drops formed on partially wetting substrates, whose footprint is not circular. These drops are consequence of the breakup processes occurring in thin films when anisotropic contact line motions take place. The anisotropy is basically due to the hysteresis of the contact angle since there is a wetting process in some parts of the contact line, while a dewetting occurs in other parts. Here, we obtain a characteristic drop shape from the rupture of a long liquid filament sitting on a solid substrate. We analyze its shape and contact angles by means of goniometric and refractive techniques. We also find a non-trivial steady state solution for the drop shape within the long wave approximation (lubrication theory), and we compare most of its features with experimental data. This solution is presented both in Cartesian and polar coordinates, whose constants must be determined by a certain group of measured parameters. Besides, we obtain the dynamics of the drop generation from numerical simulations of the full Navier-Stokes equation, where we emulate the hysteretic effects with an appropriate spatial distribution of the static contact angle over the substrate.

  9. On Introducing Asymmetry into Circular Distributions

    Directory of Open Access Journals (Sweden)

    Dale Umbach

    2012-07-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-parent:""; mso-padding-alt:0in 5.4pt 0in 5.4pt; mso-para-margin:0in; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:10.0pt; font-family:"Times New Roman","serif";} We give a brief history of the results which led to the introduction of asymmetry into symmetric circular distributions. This is followed by the presentation of another method of introducing asymmetry. Some properties of the induced distributions are studied. Finally, this new distribution is shown to be a reasonable fit to the Jander ant data as presented in Fisher (1993.

  10. Status of the Future Circular Collider Study

    CERN Document Server

    Benedikt, Michael

    2016-01-01

    Following the 2013 update of the European Strategy for Particle Physics, the international Future Circular Collider (FCC) Study has been launched by CERN as host institute. Its main purpose and long-term goal is to design an energyfrontier hadron collider (FCC-hh) with a centre-of-mass energy of about 100 TeV in a new 80–100 km tunnel. The FCC study also includes the design of a 90–350 GeV highluminosity lepton collider (FCC-ee) installed in the same tunnel, serving as Higgs, top and Z factory, as a potential intermediate step, as well as an electron-proton collider option (FCC-he). The physics cases for such machines are being assessed and concepts for experiments will be developed by the end of 2018, in time for the next update of the European Strategy for Particle Physics. This overview summarizes the status of machine designs and parameters, and it discusses the essential technical components being developed in the frame of the FCC study. Key elements are superconducting accelerator-dipole magnets wit...

  11. Drops with non-circular footprints

    CERN Document Server

    Ravazzoli, Pablo D; Diez, Javier A

    2015-01-01

    In this paper we study the morphology of drops formed on partially wetting substrates, whose footprint is not circular. This type of drops is a consequence of the breakup processes occurring in thin films when anisotropic contact line motions take place. The anisotropy is basically due to hysteresis effects of the contact angle since some parts of the contact line are wetting, while others are dewetting. Here, we obtain a peculiar drop shape from the rupture of a long liquid filament sitting on a solid substrate, and analyze its shape and contact angles by means of goniometric and refractive techniques. We also find a non--trivial steady state solution for the drop shape within the long wave approximation (lubrication theory), and compare most of its features with experimental data. This solution is presented both in Cartesian and polar coordinates, whose constants must be determined by a certain group of measured parameters. Besides, we obtain the dynamics of the drop generation from numerical simulations of...

  12. Wave Interaction with Dual Circular Porous Plates

    Institute of Scientific and Technical Information of China (English)

    Arpita Mondal; R.Gayen

    2015-01-01

    In this paper we have investigated the reflection and the transmission of a system of two symmetric circular-arc-shaped thin porous plates submerged in deep water within the context of linear theory. The hypersingular integral equation technique has been used to analyze the problem mathematically. The integral equations are formulated by applying Green’s integral theorem to the fundamental potential function and the scattered potential function into a suitable fluid region, and then using the boundary condition on the porous plate surface. These are solved approximately using an expansion-cum-collocation method where the behaviour of the potential functions at the tips of the plates have been used. This method ultimately produces a very good numerical approximation for the reflection and the transmission coefficients and hydrodynamic force components. The numerical results are depicted graphically against the wave number for a variety of layouts of the arc. Some results are compared with known results for similar configurations of dual rigid plate systems available in the literature with good agreement.

  13. Thermal conductivity modeling of circular-wire nanocomposites

    Science.gov (United States)

    Hsieh, Tse-Yang; Yang, Jaw-Yen

    2010-08-01

    A phonon Boltzmann equation solver using multiblock-structured grid system is developed and applied to study transverse thermal transport in silicon-germanium circular-wire nanocomposite (silicon nanowires embedded in germanium host matrix). Past studies usually assume geometric simplification for the circular-wire nanocomposite, so the heat transfer is actually modeled in a square-wire nanocomposite. To demonstrate geometry effect, phonon transport in both the circular-wire and square-wire nanocomposites are investigated with various wire spacings, volume fractions, and dimensions. In ballistic phonon transport, due to the smoothness of circular shape, the circular wire imposes less thermal resistance than the square wire. Nevertheless, in the geometric simplification, the wire spacing of the square-wire nanocomposite is larger than that of the circular-wire nanocomposite. The usual geometric simplification can overestimate the thermal conductivity of the circular-wire nanocomposite. The obtained results can provide essential information for the development of bulk-nanostructured thermoelectric devices.

  14. Cutting force prediction for circular end milling process

    Institute of Scientific and Technical Information of China (English)

    Wu Baohai; Yan Xue; Luo Ming; Gao Ge

    2013-01-01

    A deduced cutting force prediction model for circular end milling process is presented in this paper.Traditional researches on cutting force model usually focus on linear milling process which does not meet other cutting conditions,especially for circular milling process.This paper presents an improved cutting force model for circular end milling process based on the typical linear milling force model.The curvature effects of tool path on chip thickness as well as entry and exit angles are analyzed,and the cutting force model of linear milling process is then corrected to fit circular end milling processes.Instantaneous cutting forces during circular end milling process are predicted according to the proposed model.The deduced cutting force model can be used for both linear and circular end milling processes.Finally,circular end milling experiments with constant and variable radial depth were carried out to verify the availability of the proposed method.Experiment results show that measured results and simulated results corresponds well with each other.

  15. Bi-Modal and Mixture Distributions in Circular Data Analysis

    Directory of Open Access Journals (Sweden)

    Muhammet Burak KILIC

    2016-10-01

    Full Text Available Objective: Circular statistics is a special area which is analyzed by observed angular data on the unit circle. In many various studies, such as environment, biology or medicine, circular (angular data is an important part of the research. For illustration, to determine the secondary structure of the proteins by utilizing dihedral angles or to asses physical disorders such as gait disturbances between the bones in the geometric morphology or the organization of the beach after leaving the eggs of sea turtles, are the important applications of this area. The uses of linear statistical methods in this area lead to misleading results because of the geometric shape of the circular data. Therefore, when it is analyzing such angular data, circular statistical methods should be used. The objective of this study is compared with the bi-modal and mixture distributions in circular data analysis. Material and Methods: The bi-modal mixture von Mises, wrapped Normal, wrapped Cauchy and the generalisations of von Mises distributions were used and it was performed by iterative methods to obtain aximum likelihood estimators. These iterative methods were applied in R programming and the R codes were given for the circular distribution of the parameter estimation. These distributions were examined for analyzing dihedral angles in proteins and turtles rotations, and model selection was performed by using Akaike and Bayesian information criteria. Results: For dihedral angles in protein, two mixture wrapped Cauchy distribution was given the better fit. For turtle rotations, the generalizations of von Mises distribution and two mixture von Mises distribution were given the better fit. Conclusion: If there is observed an excessive concentration in one or more modes in analyzing circular data, the bimodal mixture von Mises and the generalisations of von Mises distribution for modeling may not be preferred. If there is not observed an excessive concentration in

  16. Anisotropic elliptical dichroism and influence of imperfection of circular polarization upon anisotropic circular dichroism

    Energy Technology Data Exchange (ETDEWEB)

    Wakabayashi, Masamitsu [Department of Biomolecular Engineering, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8501 (Japan); RIKEN, Research Cluster for Innovation, Nakamura Lab, 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan); Yokojima, Satoshi, E-mail: yokojima@toyaku.ac.jp [Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachiouji-shi, Tokyo 192-0392 (Japan); RIKEN, Research Cluster for Innovation, Nakamura Lab, 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan); Fukaminato, Tuyoshi [Research Institute for Electronic Science, Hokkaido University, N20, W10, Kita-ku, Sapporo 001-0020 (Japan); PRESTO, Japan Science and Technology Agency (JST), Sanbancho, Chiyoda-ku, Tokyo 102-0075 (Japan); Ohtani, Hiroyuki [Department of Biomolecular Engineering, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8501 (Japan); Nakamura, Shinichiro, E-mail: snakamura@riken.jp [RIKEN, Research Cluster for Innovation, Nakamura Lab, 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan)

    2015-04-21

    In spite of the importance of anisotropic circular dichroism, in practice, it is difficult to get rid of the artifacts that arise from the imperfection of the circular polarization. Undesirable linear dichroism, interference of two orthogonal polarization states, and linear birefringence prevent us from making accurate measurements. We propose a theoretical method for evaluating the contributions of the first two, which are thought to be the main artifacts when specimens are not thick enough. Using the time-dependent perturbation theory and taking into account the direction of light propagation toward an orientationally fixed molecule, we formulated the transition probability of systems perturbed by arbitrarily polarized light and the absorption difference associated with two kinds of polarized light. We also formulated, as an extension of the dissymmetry factor of circular dichroism, a newly defined dissymmetry factor associated with two arbitrary polarization states. Furthermore, we considered a mixed-state of photon ensemble in which polarization states distribute at a certain width around a certain average. Although the purity of polarization and ellipticity does not correspond immediately, by considering the mixed state it is possible to treat them consistently. We used quantum statistical mechanics to describe the absorption difference for two kinds of photon ensembles and applied the consequent formula to examine the reported experimental results of single-molecule chiroptical responses under discussion in the recent past. The artifacts are theoretically suggested to be sensitive to the incident direction of elliptically polarized light and to the oriented systems, the ellipticity, and the orientation of ellipse. The mixed state has little, if any, effect when the polarization state distribution is narrow.

  17. Localization and dynamics of small circular DNA in live mammalian nuclei

    DEFF Research Database (Denmark)

    Mearini, Giulia; Nielsen, Peter E; Fackelmayer, Frank O

    2004-01-01

    or experimental transfection. To address this point, we have created traceable model substrates by direct labeling of plasmid DNA with fluorescent peptide nucleic acids, and have investigated their fate after microinjection into living cells. Here, we report that foreign DNA rapidly undergoes interactions......While genomic DNA, packaged into chromatin, is known to be locally constrained but highly dynamic in the nuclei of living cells, little is known about the localization and dynamics of small circular DNA molecules that invade cells by virus infection, application of gene therapy vectors...... with intranuclear structural sites that strongly reduce its mobility and restrict the DNA to regions excluding nucleoli and nuclear bodies such as PML bodies. The labeled plasmids partially co-localize with SAF-A, a well characterized marker protein for the nuclear 'scaffold' or 'matrix', and are resistant towards...

  18. Nine New Fluorescent Probes

    Science.gov (United States)

    Lin, Tsung-I.; Jovanovic, Misa V.; Dowben, Robert M.

    1989-06-01

    Absorption and fluorescence spectroscopic studies are reported here for nine new fluorescent probes recently synthesized in our laboratories: four pyrene derivatives with substituents of (i) 1,3-diacetoxy-6,8-dichlorosulfonyl, (ii) 1,3-dihydroxy-6,8-disodiumsulfonate, (iii) 1,3-disodiumsulfonate, and (iv) l-ethoxy-3,6,8-trisodiumsulfonate groups, and five [7-julolidino] coumarin derivatives with substituents of (v) 3-carboxylate-4-methyl, (vi) 3- methylcarboxylate, (vii) 3-acetate-4-methyl, (viii) 3-propionate-4-methyl, and (ix) 3-sulfonate-4-methyl groups. Pyrene compounds i and ii and coumarin compounds v and vi exhibit interesting absorbance and fluorescence properties: their absorption maxima are red shifted compared to the parent compound to the blue-green region, and the band width broadens considerably. All four blue-absorbing dyes fluoresce intensely in the green region, and the two pyrene compounds emit at such long wavelengths without formation of excimers. The fluorescence properties of these compounds are quite environment-sensitive: considerable spectral shifts and fluorescence intensity changes have been observed in the pH range from 3 to 10 and in a wide variety of polar and hydrophobic solvents with vastly different dielectric constants. The high extinction and fluorescence quantum yield of these probes make them ideal fluorescent labeling reagents for proteins, antibodies, nucleic acids, and cellular organelles. The pH and hydrophobicity-dependent fluorescence changes can be utilized as optical pH and/or hydrophobicity indicators for mapping environmental difference in various cellular components in a single cell. Since all nine probes absorb in the UV, but emit at different wavelengths in the visible, these two groups of compounds offer an advantage of utilizing a single monochromatic light source (e.g., a nitrogen laser) to achieve multi-wavelength detection for flow cytometry application. As a first step to explore potential application in

  19. 基于排列熵的径流突变识别%Application of permutation entropy to runoff mutation analysis

    Institute of Scientific and Technical Information of China (English)

    李五勤; 王义民; 孙东永; 黄强

    2014-01-01

    针对变化环境下的径流序列表现出来的复杂性,采用排列熵对径流序列的突变性进行分析.采用相空间重构建立新的向量,计算序列的动力学熵值变化特征,通过熵值的变化规律进行序列突变点位置和数目的识别.利用该方法对黄河流域花园口站1919-1998年共79年的天然月径流序列的突变进行了实际验证.结果表明,排列熵能够有效地对序列的突变进行检测,检测到的突变年和气候的突变有着很好的响应关系.排列熵值的变化可以很好地刻画序列的突变特征,从序列的复杂性入手可以有效地对序列的突变进行分析.%Permutation entropy is adopted to analyze the mutation of runoff series that could be complicated under changeable environments.New vectors are constructed by phase space reconstruction,and their dynamic characteristics of entropy variation are calculated.Then by the variation trends of entropy,the location and number of the mutation points can be identified.This method was verified using a natural monthly runoff series from 1919 to 1998 of the Huayuankou hydrometric station on the Yellow River.The results indicate that the mutation can be efficiently tested and identified with permutation entropy,and the detected mutation shows a very good response to climate mutation.Mutation characteristics of a runoff series can be well depicted by the changes of permutation entropy,so the mutation can be effectively analyzed according to the complexity of the series.

  20. Administrative Circular No. 26 (Rev. 9) – Recognition of Merit

    CERN Multimedia

    2012-01-01

    Administrative Circular No. 26 (Rev. 9) entitled "Recognition of Merit”, approved by the Director-General following discussion in the Standing Concertation Committee meeting on 27 September 2011 is available on the intranet site of the Human Resources Department: https://cern.ch/hr-docs/admincirc/admincirc.asp The circular was above all revised in order to integrate the new CERN Competency Model into the annual procedure of performance appraisal. It cancels and replaces Administrative Circular No. 26 (Rev. 8) entitled "Recognition of merit” of September 2008. Department Head Office HR Department