WorldWideScience

Sample records for canopy

  1. NLCD 2001 - Tree Canopy

    Data.gov (United States)

    Minnesota Department of Natural Resources — The National Land Cover Database 2001 tree canopy layer for Minnesota (mapping zones 39-42, 50-51) was produced through a cooperative project conducted by the...

  2. Canopy for VERAView Installation Guide

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Ronald W. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2016-09-12

    With the addition of the 3D volume slicer widget, VERAView now relies on Mayavi and its dependents. Enthought's Canopy Python environment provides everything VERAView needs, and pre-built Canopy versions for Windows, Mac OSX, and Linux can be downloaded.

  3. Remote canopy hemispherical image collection system

    Science.gov (United States)

    Wan, Xuefen; Liu, Bingyu; Yang, Yi; Han, Fang; Cui, Jian

    2016-11-01

    Canopies are major part of plant photosynthesis and have distinct architectural elements such as tree crowns, whorls, branches, shoots, etc. By measuring canopy structural parameters, the solar radiation interception, photosynthesis effects and the spatio-temporal distribution of solar radiation under the canopy can be evaluated. Among canopy structure parameters, Leaf Area Index (LAI) is the key one. Leaf area index is a crucial variable in agronomic and environmental studies, because of its importance for estimating the amount of radiation intercepted by the canopy and the crop water requirements. The LAI can be achieved by hemispheric images which are obtained below the canopy with high accuracy and effectiveness. But existing hemispheric images canopy-LAI measurement technique is based on digital SLR camera with a fisheye lens. Users need to collect hemispheric image manually. The SLR camera with fisheye lens is not suit for long-term canopy-LAI outdoor measurement too. And the high cost of SLR limits its capacity. In recent years, with the development of embedded system and image processing technology, low cost remote canopy hemispheric image acquisition technology is becoming possible. In this paper, we present a remote hemispheric canopy image acquisition system with in-field/host configuration. In-field node based on imbed platform, low cost image sensor and fisheye lens is designed to achieve hemispherical image of plant canopy at distance with low cost. Solar radiation and temperature/humidity data, which are important for evaluating image data validation, are obtained for invalid hemispherical image elimination and node maintenance too. Host computer interacts with in-field node by 3G network. The hemispherical image calibration and super resolution are used to improve image quality in host computer. Results show that the remote canopy image collection system can make low cost remote canopy image acquisition for LAI effectively. It will be a potential

  4. Canopy Dynamics in Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2010-07-27

    Nanoscale ionic materials (NIMS) are organic - inorganic hybrids in which a core nanostructure is functionalized with a covalently attached corona and an ionically tethered organic canopy. NIMS are engineered to be liquids under ambient conditions in the absence of solvent and are of interest for a variety of applications. We have used nuclear magnetic resonance (NMR) relaxation and pulse-field gradient (PFG) diffusion experiments to measure the canopy dynamics of NIMS prepared from 18-nm silica cores modified by an alkylsilane monolayer possessing terminal sulfonic acid functionality, paired with an amine-terminated ethylene oxide/propylene oxide block copolymer canopy. Carbon NMR studies show that the block copolymer canopy is mobile both in the bulk and in the NIMS and that the fast (ns) dynamics are insensitive to the presence of the silica nanoparticles. Canopy diffusion in the NIMS is slowed relative to the neat canopy, but not to the degree predicted from the diffusion of hard-sphere particles. Canopy diffusion is not restricted to the surface of the nanoparticles and shows unexpected behavior upon addition of excess canopy. Taken together, these data indicate that the liquid-like behavior in NIMS is due to rapid exchange of the block copolymer canopy between the ionically modified nanoparticles. © 2010 American Chemical Society.

  5. Nondestructive, stereological estimation of canopy surface area

    DEFF Research Database (Denmark)

    Wulfsohn, Dvora-Laio; Sciortino, Marco; Aaslyng, Jesper M.;

    2010-01-01

    We describe a stereological procedure to estimate the total leaf surface area of a plant canopy in vivo, and address the problem of how to predict the variance of the corresponding estimator. The procedure involves three nested systematic uniform random sampling stages: (i) selection of plants from...... is high. Using a grid intensity of 1.76 cm2/point we estimated plant and canopy surface areas with accuracies similar to or better than those obtained using image analysis and a commercial leaf area meter. For canopy surface areas of approximately 1 m2 (10 plants), the fractionator leaf approach...... a canopy using the smooth fractionator, (ii) sampling of leaves from the selected plants using the fractionator, and (iii) area estimation of the sampled leaves using point counting. We apply this procedure to estimate the total area of a chrysanthemum (Chrysanthemum morifolium L.) canopy and evaluate both...

  6. Lidar Altimeter Measurements of Canopy Structure: Methods and Validation for Closed Canopy, Broadleaf Forests

    Science.gov (United States)

    Harding, D. J.; Lefsky, M. A.; Parker, G. G.; Blair, J. B.

    1999-01-01

    Lidar altimeter observations of vegetated landscapes provide a time-resolved measure of laser pulse backscatter energy from canopy surfaces and the underlying ground. Airborne lidar altimeter data was acquired using the Scanning Lidar Imager of Canopies by Echo Recovery (SLICER) for a successional sequence of four, closed-canopy, deciduous forest stands in eastern Maryland. The four stands were selected so as to include a range of canopy structures of importance to forest ecosystem function, including variation in the height and roughness of the outer-most canopy surface and the vertical organization of canopy stories and gaps. The character of the SLICER backscatter signal is described and a method is developed that accounts for occlusion of the laser energy by canopy surfaces, transforming the backscatter signal to a canopy height profile (CHP) that quantitatively represents the relative vertical distribution of canopy surface area. The transformation applies an increased weighting to the backscatter amplitude as a function of closure through the canopy and assumes a horizontally random distribution of the canopy components. SLICER CHPs, averaged over areas of overlap where lidar ground tracks intersect, are shown to be highly reproducible. CHP transects across the four stands reveal spatial variations in vegetation, at the scale of the individual 10 m diameter laser footprints, within and between stands. Averaged SLICER CHPs are compared to analogous height profile results derived from ground-based sightings to plant intercepts measured on plots within the four stands. Tbe plots were located on the segments of the lidar ground tracks from which averaged SLICER CHPs were derived, and the ground observations were acquired within two weeks of the SLICER data acquisition to minimize temporal change. The differences in canopy structure between the four stands is similarly described by the SLICER and ground-based CHP results, however a Chi-square test of similarity

  7. Explosive Fracturing of an F-16 Canopy for Through-Canopy Crew Egress

    Science.gov (United States)

    Bement, Laurence J.

    2000-01-01

    Through-canopy crew egress, such as in the Harrier (AV-8B) aircraft, expands escape envelopes by reducing seat ejection delays in waiting for canopy jettison. Adverse aircraft attitude and reduced forward flight speed can further increase the times for canopy jettison. However, the advent of heavy, high-strength polycarbonate canopies for bird-strike resistance has not only increased jettison times, but has made seat penetration impossible. The goal of the effort described in this paper was to demonstrate a method of explosively fracturing the F-16 polycarbonate canopy to allow through-canopy crew ejection. The objectives of this effort were to: 1. Mount the explosive materials on the exterior of the canopy within the mold line, 2. Minimize visual obstructions, 3. Minimize internal debris on explosive activation, 4. Operate within less than 10 ms, 5. Maintain the shape of the canopy after functioning to prevent major pieces from entering the cockpit, and 6. Minimize the resistance of the canopy to seat penetration. All goals and objectives were met in a full-scale test demonstration. In addition to expanding crew escape envelopes, this canopy fracture approach offers the potential for reducing system complexity, weight and cost, while increasing overall reliability, compared to current canopy jettison approaches. To comply with International Traffic in Arms Regulations (ITAR) and permit public disclosure, this document addresses only the principles of explosive fracturing of the F-16 canopy materials and the end result. ITAR regulations restrict information on improving the performance of weapon systems. Therefore, details on the explosive loads and final assembly of this canopy fracture approach, necessary to assure functional performance, are not included.

  8. VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine

    Directory of Open Access Journals (Sweden)

    Roberta De Bei

    2016-04-01

    Full Text Available Leaf area index (LAI and plant area index (PAI are common and important biophysical parameters used to estimate agronomical variables such as canopy growth, light interception and water requirements of plants and trees. LAI can be either measured directly using destructive methods or indirectly using dedicated and expensive instrumentation, both of which require a high level of know-how to operate equipment, handle data and interpret results. Recently, a novel smartphone and tablet PC application, VitiCanopy, has been developed by a group of researchers from the University of Adelaide and the University of Melbourne, to estimate grapevine canopy size (LAI and PAI, canopy porosity, canopy cover and clumping index. VitiCanopy uses the front in-built camera and GPS capabilities of smartphones and tablet PCs to automatically implement image analysis algorithms on upward-looking digital images of canopies and calculates relevant canopy architecture parameters. Results from the use of VitiCanopy on grapevines correlated well with traditional methods to measure/estimate LAI and PAI. Like other indirect methods, VitiCanopy does not distinguish between leaf and non-leaf material but it was demonstrated that the non-leaf material could be extracted from the results, if needed, to increase accuracy. VitiCanopy is an accurate, user-friendly and free alternative to current techniques used by scientists and viticultural practitioners to assess the dynamics of LAI, PAI and canopy architecture in vineyards, and has the potential to be adapted for use on other plants.

  9. US Forest Service LANDFIRE Canopy Fuel

    Data.gov (United States)

    US Forest Service, Department of Agriculture — LANDFIRE canopy fuel data describe the composition and characteristics of wildland surface fuel and can be implemented within models to predict wildland fire...

  10. Bone Canopies in Pediatric Renal Osteodystrophy

    DEFF Research Database (Denmark)

    Pereira, Renata C; Levin Andersen, Thomas; Friedman, Peter A;

    2016-01-01

    Pediatric renal osteodystrophy (ROD) is characterized by changes in bone turnover, mineralization, and volume that are brought about by alterations in bone resorption and formation. The resorptive and formative surfaces on the cancellous bone are separated from the marrow cavity by canopies...... and their association with biochemical and bone histomorphometric parameters in 106 pediatric chronic kidney disease (CKD) patients (stage 2-5) across the spectrum of ROD. Canopies in CKD patients often appeared as thickened multilayered canopies, similar to previous reports in patients with primary hyperparathyroidism....... This finding contrasts with the thin appearance reported in healthy individuals with normal kidney function. Furthermore, canopies in pediatric CKD patients showed immunoreactivity to the PTH receptor (PTHR1) as well as to the receptor activator of nuclear factor kappa-B ligand (RANKL). The number of surfaces...

  11. Dynamics of vertical leaf nitrogen distribution in a vegetative wheat canopy Impact on canopy photosynthesis

    NARCIS (Netherlands)

    Dreccer, M.F.; Oijen, van M.; Schapendonk, A.H.C.M.; Pot, C.S.; Rabbinge, R.

    2000-01-01

    The development of vertical canopy gradients of leaf N has been regarded as an adaptation to the light gradient that helps to maximize canopy photosynthesis. In this study we report the dynamics of vertical leaf N distribution during vegetative growth of wheat in response to changes in N availabilit

  12. Remote sensing of sagebrush canopy nitrogen

    Science.gov (United States)

    Mitchell, Jessica J.; Glenn, Nancy F.; Sankey, Temuulen T.; Derryberry, DeWayne R.; Germino, Matthew J.

    2012-01-01

    This paper presents a combination of techniques suitable for remotely sensing foliar Nitrogen (N) in semiarid shrublands – a capability that would significantly improve our limited understanding of vegetation functionality in dryland ecosystems. The ability to estimate foliar N distributions across arid and semi-arid environments could help answer process-driven questions related to topics such as controls on canopy photosynthesis, the influence of N on carbon cycling behavior, nutrient pulse dynamics, and post-fire recovery. Our study determined that further exploration into estimating sagebrush canopy N concentrations from an airborne platform is warranted, despite remote sensing challenges inherent to open canopy systems. Hyperspectral data transformed using standard derivative analysis were capable of quantifying sagebrush canopy N concentrations using partial least squares (PLS) regression with an R2 value of 0.72 and an R2 predicted value of 0.42 (n = 35). Subsetting the dataset to minimize the influence of bare ground (n = 19) increased R2 to 0.95 (R2 predicted = 0.56). Ground-based estimates of canopy N using leaf mass per unit area measurements (LMA) yielded consistently better model fits than ground-based estimates of canopy N using cover and height measurements. The LMA approach is likely a method that could be extended to other semiarid shrublands. Overall, the results of this study are encouraging for future landscape scale N estimates and represent an important step in addressing the confounding influence of bare ground, which we found to be a major influence on predictions of sagebrush canopy N from an airborne platform.

  13. Modelling Canopy Flows over Complex Terrain

    Science.gov (United States)

    Grant, Eleanor R.; Ross, Andrew N.; Gardiner, Barry A.

    2016-12-01

    Recent studies of flow over forested hills have been motivated by a number of important applications including understanding CO_2 and other gaseous fluxes over forests in complex terrain, predicting wind damage to trees, and modelling wind energy potential at forested sites. Current modelling studies have focussed almost exclusively on highly idealized, and usually fully forested, hills. Here, we present model results for a site on the Isle of Arran, Scotland with complex terrain and heterogeneous forest canopy. The model uses an explicit representation of the canopy and a 1.5-order turbulence closure for flow within and above the canopy. The validity of the closure scheme is assessed using turbulence data from a field experiment before comparing predictions of the full model with field observations. For near-neutral stability, the results compare well with the observations, showing that such a relatively simple canopy model can accurately reproduce the flow patterns observed over complex terrain and realistic, variable forest cover, while at the same time remaining computationally feasible for real case studies. The model allows closer examination of the flow separation observed over complex forested terrain. Comparisons with model simulations using a roughness length parametrization show significant differences, particularly with respect to flow separation, highlighting the need to explicitly model the forest canopy if detailed predictions of near-surface flow around forests are required.

  14. Modelling Canopy Flows over Complex Terrain

    Science.gov (United States)

    Grant, Eleanor R.; Ross, Andrew N.; Gardiner, Barry A.

    2016-06-01

    Recent studies of flow over forested hills have been motivated by a number of important applications including understanding CO_2 and other gaseous fluxes over forests in complex terrain, predicting wind damage to trees, and modelling wind energy potential at forested sites. Current modelling studies have focussed almost exclusively on highly idealized, and usually fully forested, hills. Here, we present model results for a site on the Isle of Arran, Scotland with complex terrain and heterogeneous forest canopy. The model uses an explicit representation of the canopy and a 1.5-order turbulence closure for flow within and above the canopy. The validity of the closure scheme is assessed using turbulence data from a field experiment before comparing predictions of the full model with field observations. For near-neutral stability, the results compare well with the observations, showing that such a relatively simple canopy model can accurately reproduce the flow patterns observed over complex terrain and realistic, variable forest cover, while at the same time remaining computationally feasible for real case studies. The model allows closer examination of the flow separation observed over complex forested terrain. Comparisons with model simulations using a roughness length parametrization show significant differences, particularly with respect to flow separation, highlighting the need to explicitly model the forest canopy if detailed predictions of near-surface flow around forests are required.

  15. Effect of canopy thickness and canopy saturation on the amount and kinetic energy of throughfall: An experimental approach

    Science.gov (United States)

    Nanko, Kazuki; Onda, Yuichi; Ito, Akane; Moriwaki, Hiromu

    2008-03-01

    To investigate how canopy thickness and canopy saturation affect the amount and kinetic energy of throughfall, we conducted indoor experiments using a 9.8-m-tall transplanted Japanese cypress (Chamaecyparis obtusa) and a large-scale rainfall simulator with spray nozzles at a height of 16 m. The amount of throughfall and raindrop sizes and velocities were measured at twenty-four points under four canopy structures generated by staged branch pruning. Decreasing the canopy thickness resulted in increases of the initial throughfall amount, volume proportion of large throughfall drops, the number of drops with high velocities, and throughfall kinetic energy. Compared to a saturated canopy, a canopy undergoing wetting had lower throughfall amounts and volume proportion of large drops, but higher mean drop velocity. Canopy thickness affected throughfall generation by affecting the processes of canopy saturation and drop generation within the canopy.

  16. Testing models of tree canopy structure

    Energy Technology Data Exchange (ETDEWEB)

    Martens, S.N. (Los Alamos National Laboratory, NM (United States))

    1994-06-01

    Models of tree canopy structure are difficult to test because of a lack of data which are suitability detailed. Previously, I have made three-dimensional reconstructions of individual trees from measured data. These reconstructions have been used to test assumptions about the dispersion of canopy elements in two- and three-dimensional space. Lacunarity analysis has also been used to describe the texture of the reconstructed canopies. Further tests regarding models of the nature of tree branching structures have been made. Results using probability distribution functions for branching measured from real trees show that branching in Juglans is not Markovian. Specific constraints or rules are necessary to achieve simulations of branching structure which are faithful to the originally measured trees.

  17. BOREAS TE-9 NSA Canopy Biochemistry

    Science.gov (United States)

    Hall, Forrest G. (Editor); Curd, Shelaine (Editor); Margolis, Hank; Charest, Martin; Sy, Mikailou

    2000-01-01

    The BOREAS TE-9 team collected several data sets related to chemical and photosynthetic properties of leaves. This data set contains canopy biochemistry data collected in 1994 in the NSA at the YJP, OJR, OBS, UBS, and OA sites, including biochemistry lignin, nitrogen, cellulose, starch, and fiber concentrations. These data were collected to study the spatial and temporal changes in the canopy biochemistry of boreal forest cover types and how a high-resolution radiative transfer model in the mid-infrared could be applied in an effort to obtain better estimates of canopy biochemical properties using remote sensing. The data are available in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  18. Improved snowmelt simulations with a canopy model forced with photo-derived direct beam canopy transmissivity

    Science.gov (United States)

    Musselman, Keith N.; Molotch, Noah P.; Margulis, Steven A.; Lehning, Michael; Gustafsson, David

    2012-10-01

    The predictive capacity of a physically based snow model to simulate point-scale, subcanopy snowmelt dynamics is evaluated in a mixed conifer forest, southern Sierra Nevada, California. Three model scenarios each providing varying levels of canopy structure detail were tested. Simulations of three water years initialized at locations of 24 ultrasonic snow depth sensors were evaluated against observations of snow water equivalent (SWE), snow disappearance date, and volumetric soil water content. When canopy model parameters canopy openness and effective leaf area index were obtained from satellite and literature-based sources, respectively, the model was unable to resolve the variable subcanopy snowmelt dynamics. When canopy parameters were obtained from hemispherical photos, the improvements were not statistically significant. However, when the model was modified to accept photo-derived time-varying direct beam canopy transmissivity, the error in the snow disappearance date was reduced by as much as one week and positive and negative biases in melt-season SWE and snow cover duration were significantly reduced. Errors in the timing of soil meltwater fluxes were reduced by 11 days on average. The optimum aggregated temporal model resolution of direct beam canopy transmissivity was determined to be 30 min; hourly averages performed no better than the bulk canopy scenarios and finer time steps did not increase overall model accuracy. The improvements illustrate the important contribution of direct shortwave radiation to subcanopy snowmelt and confirm the known nonlinear melt behavior of snow cover.

  19. 100-Meter Resolution Tree Canopy of Hawaii - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Hawaii, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  20. West Coast Canopy-Forming Kelp, 1989-2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data include the general extents of canopy-forming kelp surveys from 1989 to 2014 and a compilation of existing data sets delineating canopy-forming kelp beds...

  1. 100-Meter Resolution Tree Canopy of Alaska - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Alaska, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  2. Wireless sensor networks for canopy temperature sensing and irrigation management

    Science.gov (United States)

    For researchers, canopy temperature measurements have proven useful in characterizing crop water stress and developing protocols for irrigation management. Today, there is heightened interest in using remote canopy temperature measurements for real-time irrigation scheduling. However, without the us...

  3. Scaling leaf measurements to estimate cotton canopy gas exchange

    Science.gov (United States)

    Diurnal leaf and canopy gas exchange of well watered field grown cotton were measured. Leaf measurements were made with a portable photosynthesis system and canopy measurements with open Canopy Evapo-Transpiration and Assimilation (CETA) systems. Leaf level measurements were arithmetically scaled to...

  4. Canopy dynamics of a tropical rain forest in French Guiana.

    NARCIS (Netherlands)

    Meer, van der P.J.

    1995-01-01

    The canopy dynamics (i.e. the formation and closure of canopy gaps) of a tropical rain forest in French Guiana are described. The formation of canopy gaps is investigated. The difficulties with gap size measurements are studied, and causes and consequences of treefalls and branchfalls are examined.

  5. Spatial variability of throughfall and raindrops under a single canopy with different canopy structure

    Science.gov (United States)

    Nanko, Kazuki; Onda, Yuichi; Ito, Akane; Moriwaki, Hiromu

    2013-04-01

    To evaluate the spatial variability of throughfall amount, raindrops, and erosivity under a single canopy during calm meteorological conditions, indoor experiments were conducted using a 9.8-m-tall transplanted Japanese cypress (Chamaecyparis obtusa) and a large-scale rainfall simulator. Drop size distribution, drop velocity, and kinetic energy of throughfall varied spatially under a single canopy as did throughfall amount and rain rate. Compared with throughfall rain rate, the variability was similar in drop size distribution, lower in drop velocity, and higher in kinetic energy. The results suggest that the spatial distribution of throughfall amount was dominated by the canopy shape and position of branches inside the canopy, and thus the spatial distribution was correlated with the radial distance from the trunk. Throughfall amount and rate were lower at the midway point between the trunk and the canopy edge. Throughfall drop size indices (drop size distribution, drop velocity, and unit kinetic energy) varied spatially while did not differ significantly. On the other hand, time-specific throughfall kinetic energy was correlated with the radial distance from the trunk. The dependence the throughfall kinetic energy on the radial distance from the trunk was dominated by the spatial distribution of throughfall amount. The trend in the spatial distribution of throughfall revealed in this study will aid in modelling canopy water processes and in predicting soil erosion on the bare forest floor. The part of this study is published in Nanko et al. (2011, Agric. Forest. Meteorol. 151, 1173-1182).

  6. Canopy foliar nitrogen retrieved from airborne hyperspectral imagery by correcting for canopy structure effects

    Science.gov (United States)

    Wang, Zhihui; Skidmore, Andrew K.; Wang, Tiejun; Darvishzadeh, Roshanak; Heiden, Uta; Heurich, Marco; Latifi, Hooman; Hearne, John

    2017-02-01

    A statistical relationship between canopy mass-based foliar nitrogen concentration (%N) and canopy bidirectional reflectance factor (BRF) has been repeatedly demonstrated. However, the interaction between leaf properties and canopy structure confounds the estimation of foliar nitrogen. The canopy scattering coefficient (the ratio of BRF and the directional area scattering factor, DASF) has recently been suggested for estimating %N as it suppresses the canopy structural effects on BRF. However, estimation of %N using the scattering coefficient has not yet been investigated for longer spectral wavelengths (>855 nm). We retrieved the canopy scattering coefficient for wavelengths between 400 and 2500 nm from airborne hyperspectral imagery, and then applied a continuous wavelet analysis (CWA) to the scattering coefficient in order to estimate %N. Predictions of %N were also made using partial least squares regression (PLSR). We found that %N can be accurately retrieved using CWA (R2 = 0.65, RMSE = 0.33) when four wavelet features are combined, with CWA yielding a more accurate estimation than PLSR (R2 = 0.47, RMSE = 0.41). We also found that the wavelet features most sensitive to %N variation in the visible region relate to chlorophyll absorption, while wavelet features in the shortwave infrared regions relate to protein and dry matter absorption. Our results confirm that %N can be retrieved using the scattering coefficient after correcting for canopy structural effect. With the aid of high-fidelity airborne or upcoming space-borne hyperspectral imagery, large-scale foliar nitrogen maps can be generated to improve the modeling of ecosystem processes as well as ecosystem-climate feedbacks.

  7. Modeling of forest canopy BRDF using DIRSIG

    Science.gov (United States)

    Rengarajan, Rajagopalan; Schott, John R.

    2016-05-01

    The characterization and temporal analysis of multispectral and hyperspectral data to extract the biophysical information of the Earth's surface can be significantly improved by understanding its aniosotropic reflectance properties, which are best described by a Bi-directional Reflectance Distribution Function (BRDF). The advancements in the field of remote sensing techniques and instrumentation have made hyperspectral BRDF measurements in the field possible using sophisticated goniometers. However, natural surfaces such as forest canopies impose limitations on both the data collection techniques, as well as, the range of illumination angles that can be collected from the field. These limitations can be mitigated by measuring BRDF in a virtual environment. This paper presents an approach to model the spectral BRDF of a forest canopy using the Digital Image and Remote Sensing Image Generation (DIRSIG) model. A synthetic forest canopy scene is constructed by modeling the 3D geometries of different tree species using OnyxTree software. The field collected spectra from the Harvard forest is used to represent the optical properties of the tree elements. The canopy radiative transfer is estimated using the DIRSIG model for specific view and illumination angles to generate BRDF measurements. A full hemispherical BRDF is generated by fitting the measured BRDF to a semi-empirical BRDF model. The results from fitting the model to the measurement indicates a root mean square error of less than 5% (2 reflectance units) relative to the forest's reflectance in the VIS-NIR-SWIR region. The process can be easily extended to generate a spectral BRDF library for various biomes.

  8. Dual redundant display in bubble canopy applications

    Science.gov (United States)

    Mahdi, Ken; Niemczyk, James

    2010-04-01

    Today's cockpit integrator, whether for state of the art military fast jet, or piston powered general aviation, is striving to utilize all available panel space for AMLCD based displays to enhance situational awareness and increase safety. The benefits of a glass cockpit have been well studied and documented. The technology used to create these glass cockpits, however, is driven by commercial AMLCD demand which far outstrips the combined worldwide avionics requirements. In order to satisfy the wide variety of human factors and environmental requirements, large area displays have been developed to maximize the usable display area while also providing necessary redundancy in case of failure. The AMLCD has been optimized for extremely wide viewing angles driven by the flat panel TV market. In some cockpit applications, wide viewing cones are desired. In bubble canopy cockpits, however, narrow viewing cones are desired to reduce canopy reflections. American Panel Corporation has developed AMLCD displays that maximize viewing area, provide redundancy, while also providing a very narrow viewing cone even though commercial AMLCD technology is employed suitable for high performance AMLCD Displays. This paper investigates both the large area display architecture with several available options to solve redundancy as well as beam steering techniques to also limit canopy reflections.

  9. Turbulence characteristics in grassland canopies and implications for tracer transport

    Directory of Open Access Journals (Sweden)

    E. Nemitz

    2009-01-01

    Full Text Available In-canopy turbulence is a required input to study pollutant cycling and chemistry within plant canopies and to link concentrations and sources. Despite the importance of grasslands worldwide, most previous work has focused on forests and crops. Here, turbulence parameters in a mature agricultural grassland canopy were measured with a combination of a small ultrasonic anemometer, hotwire anemometry and a radon (Rn tracer technique, as part of a measurement to study ammonia (NH3 exchange with grassland. The measurements are used to derive vertical profiles of basic turbulent parameters, for quadrant-hole analysis of the two-parametric frequency distributions of u'−w' and to derive in-canopy eddy diffusivities as input for models of in-canopy tracer transport. The results are in line with previous measurements on taller canopies, but shows increased decoupling between in-canopy flow and above-canopy turbulence. The comparison of sonic anemometry and Rn measurements implies that Lagrangian time-scales must decrease sharply at the ground, with important implications for estimating the magnitude of ground-level and soil emissions from concentration measurements. Atmospheric stability above and within the canopy has little influence on the standard deviation of vertical wind component inside the canopy. Use of the turbulence parameters in an analytical Lagrangian framework, which is here validated for heat transfer, suggests that measured in-canopy profiles of NH3 are consistent with a ground-level source, presumably from senescent plant parts, which is recaptured by the overlying canopy.

  10. Turbulence characteristics in grassland canopies and implications for tracer transport

    Directory of Open Access Journals (Sweden)

    E. Nemitz

    2009-08-01

    Full Text Available In-canopy turbulence is a required input to study pollutant cycling and chemistry within plant canopies and to link concentrations and sources. Despite the importance of grasslands worldwide, most previous work has focused on forests and crops. Here, turbulence parameters in a mature agricultural grassland canopy were measured with a combination of a small ultrasonic anemometer, hotwire anemometry and a radon (Rn tracer technique, as part of a measurement to study ammonia (NH3 exchange with grassland. The measurements are used to derive vertical profiles of basic turbulent parameters, for quadrant-hole analysis of the two-parametric frequency distributions of u'−w' and to derive in-canopy eddy diffusivities as input for models of in-canopy tracer transport. The results are in line with previous measurements on taller canopies, but shows increased decoupling between in-canopy flow and above-canopy turbulence. The comparison of sonic anemometry and Rn measurements implies that Lagrangian time-scales must decrease sharply at the ground, with important implications for estimating the magnitude of ground-level and soil emissions from concentration measurements. Atmospheric stability above and within the canopy has little influence on the standard deviation of vertical wind component inside the canopy. Use of the turbulence parameters in an analytical Lagrangian framework, which is here validated for heat transfer, suggests that measured in-canopy profiles of NH3 are consistent with a ground-level source, presumably from senescent plant parts, which is recaptured by the overlying canopy.

  11. Canopy light environment influences apple leaf physiology and fruit quality

    OpenAIRE

    Campbell, Richard J.

    1991-01-01

    Several experiments were conducted to determine: the influence of canopy position, girdling, and defoliation on nectar production; whether instantaneous light measurements yield reliable estimates of cumulative seasonal light levels within the canopy; and the effect of the canopy light environment on spur leaf physiology and fruit quality. Defoliation of nongirdled flowering spurs had no effect on nectar production or composition, while defoliation of girdled spurs n~duced nectar sugar concen...

  12. Polynomial analysis of canopy spectra and biochemical component content inversion

    Institute of Scientific and Technical Information of China (English)

    YAN Chunyan; LIU Qiang; NIU Zheng; WANG Jihua; HUANG Wenjiang; LIU Liangyun

    2005-01-01

    A polynomial expression model was developed in this paper to describe directional canopy spectra, and the decomposition of the polynomial expression was used as a tool for retrieving biochemical component content from canopy multi-angle spectra. First, the basic formula of the polynomial expression was introduced and the physical meaning of its terms and coefficients was discussed. Based on this analysis, a complete polynomial expression model and its decomposition method were given. By decomposing the canopy spectra simulated with SAILH model, it shows that the polynomial expression can not only fit well the canopy spectra, but also show the contribution of every order scattering to the whole reflectance. Taking the first scattering coefficients a10 and a01 for example, the test results show that the polynomial coefficients reflect very well the hot spot phenomenon and the effects of viewing angles, LAI and leaf inclination angle on canopy spectra. By coupling the polynomial expression with leaf model PROSPECT, a canopy biochemical component content inversion model was given. In the simulated test, the canopy multi-angle spectra were simulated by two different models, SAILH and 4-SCALE respectively, then the biochemical component content was retrieved by inverting the coupled polynomial expression + PROSPECT model. Results of the simulated test are promising, and when applying the algorithm to measured corn canopy multi-angle spectra, we also get relatively accurate chlorophyll content. It shows that the polynomial analysis provides a new method to get biochemical component content independent of any specific canopy model.

  13. Flow over a Ram-Air Parachute Canopy

    Science.gov (United States)

    Eslambolchi, Ali; Johari, Hamid

    2012-11-01

    The flow field over a full-scale, ram-air personnel parachute canopy was investigated numerically using a finite-volume flow solver coupled with the Spalart-Allmaras turbulence model. Ram-air parachute canopies resemble wings with arc-anhedral, surface protuberances, and an open leading edge for inflation. The rectangular planform canopy had an aspect ratio of 2.2 and was assumed to be rigid and impermeable. The chord-based Reynolds number was 3.2 million. Results indicate that the oncoming flow barely penetrates the canopy opening, and creates a large separation bubble below the lower lip of canopy. A thick boundary layer exists over the entire lower surface of the canopy. The flow over the upper surface of the canopy remains attached for an extended fraction of the chord. Lift increases linearly with angle of attack up to about 12 degrees. To assess the capability of lifting-line theory in predicting the forces on the canopy, the lift and drag data from a two-dimensional simulation of the canopy profile were extended using finite-wing expressions and compared with the forces from the present simulations. The finite-wing predicted lift and drag trends compare poorly against the full-span simulation, and the maximum lift-to-drag ratio is over-predicted by 36%. Sponsored by the US Army NRDEC.

  14. Evaporation from rain-wetted forest in relation to canopy wetness, canopy cover, and net radiation

    NARCIS (Netherlands)

    Klaassen, W.

    2001-01-01

    Evaporation from wet canopies is commonly calculated using E-PM, the Penman-Monteith equation with zero surface resistance. However, several observations show a lower evaporation from rain-wetted forest. Possible causes for the difference between E-PM and experiments are evaluated to provide rules f

  15. Forest canopy BRDF simulation using Monte Carlo method

    NARCIS (Netherlands)

    Huang, J.; Wu, B.; Zeng, Y.; Tian, Y.

    2006-01-01

    Monte Carlo method is a random statistic method, which has been widely used to simulate the Bidirectional Reflectance Distribution Function (BRDF) of vegetation canopy in the field of visible remote sensing. The random process between photons and forest canopy was designed using Monte Carlo method.

  16. Subtropical Modern Greenhouse Cucumber Canopy Transpiration Under Summer Climate Condition

    Institute of Scientific and Technical Information of China (English)

    LUO Wei-hong; WANG Xiao-han; DING Wei-min; CHEN Yu-qing; DAI Jian-feng

    2002-01-01

    Greenhouse canopy transpiration not only has effects on greenhouse air temperature and humidity, but also is important for determining the set-point of fertigation. In this study, Penman-Monteith equation was used to calculate the greenhouse cucumber canopy transpiration under summer climate condition.The effects of greenhouse environmental factors on canopy transpiration were analyzed based on the measurements of greenhouse microclimate factors and canopy transpiration. The results showed that Penman-Monteith equation was reliable and robust in estimating greenhouse cucumber canopy transpiration under summer climate condition. Greenhouse cucumber canopy transpiration rate increased linearly with the increase of net radiation and water vapor pressure deficit (VPD) above the canopy. But the maximum value of the canopy transpiration rate occurred at the same time as that of VPD whereas about two hours later than that of net radiation. Based on the results, it was concluded that in addition to radiation, air humidity should also be considered when determine the set-point of fertigation.

  17. A Preliminary Study of Active Region Canopies With AIA

    Science.gov (United States)

    Lucchini, Scott; Saar, S.; Muglach, K.

    2013-01-01

    Active region canopies are areas frequently accompanying active regions which have extensive horizontal magnetic fields. The large-scale canopy fields have a significant effect on the kinds of structures which can exist beneath them, and how they evolve. Using data from the Atmospheric Imaging Assembly (AIA), we developed methods to automatically identify these regions. A Differential Emission Measure (DEM) analysis is consistent with the idea that the long, hotter active region loops overlie quite cool, small-scale features ("fibrils"). We suggest that the overlying loops restrict the growth of underlying structures to mostly very short, cool features. We also studied evolution of canopy regions over time. In several cases, a large quiescent filament formed out of the former canopy region over the course of a few solar rotations, confirming previous suggestions. The canopy remains visible for several rotations after its active regions have begun to decay; in this time, the fibril magnetic fields gradually align in such a way as to form a filament channel. Further analysis of our large canopy database should uncover more information on the frequency and characteristics of these canopy-to-filament evolutions, as well as other canopy properties. This work is supported by the NSF REU program at SAO (grant ATM-0851866) and contract SP02H1701R from Lockheed Martin to SAO for SDO research.

  18. Hierarchical Canopy Dynamics of Electrolyte-Doped Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2013-12-23

    Nanoscale ionic materials (NIMs) are organic-inorganic hybrids prepared from ionically functionalized nanoparticles (NP) neutralized by oligomeric polymer counterions. NIMs are designed to behave as liquids under ambient conditions in the absence of solvent and have no volatile organic content, making them useful for a number of applications. We have used nuclear magnetic resonance relaxation and pulsed-field gradient NMR to probe local and collective canopy dynamics in NIMs based on 18-nm silica NPs with a covalently bound anionic corona, neutralized by amine-terminated ethylene oxide/propylene oxide block copolymers. The NMR relaxation studies show that the nanosecond-scale canopy dynamics depend on the degree of neutralization, the canopy radius of gyration, and crowding at the ionically modified NP surface. Two canopy populations are observed in the diffusion experiments, demonstrating that one fraction of the canopy is bound to the NP surface on the time scale (milliseconds) of the diffusion experiment and is surrounded by a more mobile layer of canopy that is unable to access the surface due to molecular crowding. The introduction of electrolyte ions (Na+ or Mg2+) screens the canopy-corona electrostatic interactions, resulting in a reduced bulk viscosity and faster canopy exchange. The magnitude of the screening effect depends upon ion concentration and valence, providing a simple route for tuning the macroscopic properties of NIMs. © 2013 American Chemical Society.

  19. Optimality of nitrogen distribution among leaves in plant canopies.

    Science.gov (United States)

    Hikosaka, Kouki

    2016-05-01

    The vertical gradient of the leaf nitrogen content in a plant canopy is one of the determinants of vegetation productivity. The ecological significance of the nitrogen distribution in plant canopies has been discussed in relation to its optimality; nitrogen distribution in actual plant canopies is close to but always less steep than the optimal distribution that maximizes canopy photosynthesis. In this paper, I review the optimality of nitrogen distribution within canopies focusing on recent advancements. Although the optimal nitrogen distribution has been believed to be proportional to the light gradient in the canopy, this rule holds only when diffuse light is considered; the optimal distribution is steeper when the direct light is considered. A recent meta-analysis has shown that the nitrogen gradient is similar between herbaceous and tree canopies when it is expressed as the function of the light gradient. Various hypotheses have been proposed to explain why nitrogen distribution is suboptimal. However, hypotheses explain patterns observed in some specific stands but not in others; there seems to be no general hypothesis that can explain the nitrogen distributions under different conditions. Therefore, how the nitrogen distribution in canopies is determined remains open for future studies; its understanding should contribute to the correct prediction and improvement of plant productivity under changing environments.

  20. Deploying Fourier Coefficients to Unravel Soybean Canopy Diversity

    Science.gov (United States)

    Jubery, Talukder Z.; Shook, Johnathon; Parmley, Kyle; Zhang, Jiaoping; Naik, Hsiang S.; Higgins, Race; Sarkar, Soumik; Singh, Arti; Singh, Asheesh K.; Ganapathysubramanian, Baskar

    2017-01-01

    Soybean canopy outline is an important trait used to understand light interception ability, canopy closure rates, row spacing response, which in turn affects crop growth and yield, and directly impacts weed species germination and emergence. In this manuscript, we utilize a methodology that constructs geometric measures of the soybean canopy outline from digital images of canopies, allowing visualization of the genetic diversity as well as a rigorous quantification of shape parameters. Our choice of data analysis approach is partially dictated by the need to efficiently store and analyze large datasets, especially in the context of planned high-throughput phenotyping experiments to capture time evolution of canopy outline which will produce very large datasets. Using the Elliptical Fourier Transformation (EFT) and Fourier Descriptors (EFD), canopy outlines of 446 soybean plant introduction (PI) lines from 25 different countries exhibiting a wide variety of maturity, seed weight, and stem termination were investigated in a field experiment planted as a randomized complete block design with up to four replications. Canopy outlines were extracted from digital images, and subsequently chain coded, and expanded into a shape spectrum by obtaining the Fourier coefficients/descriptors. These coefficients successfully reconstruct the canopy outline, and were used to measure traditional morphometric traits. Highest phenotypic diversity was observed for roundness, while solidity showed the lowest diversity across all countries. Some PI lines had extraordinary shape diversity in solidity. For interpretation and visualization of the complexity in shape, Principal Component Analysis (PCA) was performed on the EFD. PI lines were grouped in terms of origins, maturity index, seed weight, and stem termination index. No significant pattern or similarity was observed among the groups; although interestingly when genetic marker data was used for the PCA, patterns similar to canopy

  1. Deploying Fourier Coefficients to Unravel Soybean Canopy Diversity.

    Science.gov (United States)

    Jubery, Talukder Z; Shook, Johnathon; Parmley, Kyle; Zhang, Jiaoping; Naik, Hsiang S; Higgins, Race; Sarkar, Soumik; Singh, Arti; Singh, Asheesh K; Ganapathysubramanian, Baskar

    2016-01-01

    Soybean canopy outline is an important trait used to understand light interception ability, canopy closure rates, row spacing response, which in turn affects crop growth and yield, and directly impacts weed species germination and emergence. In this manuscript, we utilize a methodology that constructs geometric measures of the soybean canopy outline from digital images of canopies, allowing visualization of the genetic diversity as well as a rigorous quantification of shape parameters. Our choice of data analysis approach is partially dictated by the need to efficiently store and analyze large datasets, especially in the context of planned high-throughput phenotyping experiments to capture time evolution of canopy outline which will produce very large datasets. Using the Elliptical Fourier Transformation (EFT) and Fourier Descriptors (EFD), canopy outlines of 446 soybean plant introduction (PI) lines from 25 different countries exhibiting a wide variety of maturity, seed weight, and stem termination were investigated in a field experiment planted as a randomized complete block design with up to four replications. Canopy outlines were extracted from digital images, and subsequently chain coded, and expanded into a shape spectrum by obtaining the Fourier coefficients/descriptors. These coefficients successfully reconstruct the canopy outline, and were used to measure traditional morphometric traits. Highest phenotypic diversity was observed for roundness, while solidity showed the lowest diversity across all countries. Some PI lines had extraordinary shape diversity in solidity. For interpretation and visualization of the complexity in shape, Principal Component Analysis (PCA) was performed on the EFD. PI lines were grouped in terms of origins, maturity index, seed weight, and stem termination index. No significant pattern or similarity was observed among the groups; although interestingly when genetic marker data was used for the PCA, patterns similar to canopy

  2. Forest canopy interception loss exceeds wet canopy evaporation in Japanese cypress (Hinoki) and Japanese cedar (Sugi) plantations

    Science.gov (United States)

    Saito, Takami; Matsuda, Hiroki; Komatsu, Misako; Xiang, Yang; Takahashi, Atsuhiro; Shinohara, Yoshinori; Otsuki, Kyoichi

    2013-12-01

    Physical process of canopy interception loss remains to be explained.Rainfall partitioning to interception was similar between the stands.The rate of interception increased with rainfall intensity.Observed amount of interception was greater than estimated amount of evaporation.We suggest that splash droplets transport by canopy ventilation is the primary process of interception loss.

  3. Forward Canopy Feasibility and Thru-the-Canopy (TTC) Ejection System Study

    Science.gov (United States)

    1990-01-01

    Include Area Code) 22c. OFFICE SYMBOL Lt. Tong C. Choe, William R. Pinnell (513) 255-6524 WRDC/FIVR DO FORM 1473,84 MAR 83 APR edition may be used until...configuration. Figure 4 illustrates two configurations for forward and aft arch edge attachment. In each case the structural integrity for bird resistance is...Number 1 utilizes independent initi- ators for ground egress. In some ground egress cases it may be desirable to select either the primary canopy

  4. Turbulence in vertical axis wind turbine canopies

    Science.gov (United States)

    Kinzel, Matthias; Araya, Daniel B.; Dabiri, John O.

    2015-11-01

    Experimental results from three different full scale arrays of vertical-axis wind turbines (VAWTs) under natural wind conditions are presented. The wind velocities throughout the turbine arrays are measured using a portable meteorological tower with seven, vertically staggered, three-component ultrasonic anemometers. The power output of each turbine is recorded simultaneously. The comparison between the horizontal and vertical energy transport for the different turbine array sizes shows the importance of vertical transport for large array configurations. Quadrant-hole analysis is employed to gain a better understanding of the vertical energy transport at the top of the VAWT arrays. The results show a striking similarity between the flows in the VAWT arrays and the adjustment region of canopies. Namely, an increase in ejections and sweeps and decrease in inward and outward interactions occur inside the turbine array. Ejections are the strongest contributor, which is in agreement with the literature on evolving and sparse canopy flows. The influence of the turbine array size on the power output of the downstream turbines is examined by comparing a streamwise row of four single turbines with square arrays of nine turbine pairs. The results suggest that a new boundary layer forms on top of the larger turbine arrays as the flow adjusts to the new roughness length. This increases the turbulent energy transport over the whole planform area of the turbine array. By contrast, for the four single turbines, the vertical energy transport due to turbulent fluctuations is only increased in the near wake of the turbines. These findings add to the knowledge of energy transport in turbine arrays and therefore the optimization of the turbine spacing in wind farms.

  5. Global patterns and determinants of forest canopy height.

    Science.gov (United States)

    Tao, Shengli; Guo, Qinghua; Li, Chao; Wang, Zhiheng; Fang, Jingyun

    2016-12-01

    Forest canopy height is an important indicator of forest biomass, species diversity, and other ecosystem functions; however, the climatic determinants that underlie its global patterns have not been fully explored. Using satellite LiDAR-derived forest canopy heights and field measurements of the world's giant trees, combined with climate indices, we evaluated the global patterns and determinants of forest canopy height. The mean canopy height was highest in tropical regions, but tall forests (>50 m) occur at various latitudes. Water availability, quantified by the difference between annual precipitation and annual potential evapotranspiration (P-PET), was the best predictor of global forest canopy height, which supports the hydraulic limitation hypothesis. However, in striking contrast with previous studies, the canopy height exhibited a hump-shaped curve along a gradient of P-PET: it initially increased, then peaked at approximately 680 mm of P-PET, and finally declined, which suggests that excessive water supply negatively affects the canopy height. This trend held true across continents and forest types, and it was also validated using forest inventory data from China and the United States. Our findings provide new insights into the climatic controls of the world's giant trees and have important implications for forest management and improvement of forest growth models.

  6. Medium term ecohydrological response of peatland bryophytes to canopy disturbance

    Science.gov (United States)

    Leonard, Rhoswen; Kettridge, Nick; Krause, Stefan; Devito, Kevin; Granath, Gustaf; Petrone, Richard; Mandoza, Carl; Waddington, James Micheal

    2016-04-01

    Canopy disturbance in northern forested peatlands is widespread. Canopy changes impact the ecohydrological function of moss and peat, which provide the principal carbon store within these carbon rich ecosystems. Different mosses have contrasting contributions to carbon and water fluxes (e.g. Sphagnum fuscum and Pleurozium schreberi) and are strongly influenced by canopy cover. As a result, changes in canopy cover lead to long-term shifts in species composition and associated ecohydrological function. Despite this, the medium-term response to such disturbance, the associated lag in this transition to a new ecohydrological and biogeochemical regime, is not understood. Here we investigate this medium term ecohydrological response to canopy removal using a randomised plot design within a north Albertan peatland. We show no significant ecohydrological change in treatment plots four years after canopy removal. Notably, Pleurozium schreberi and Sphagnum fuscum remained within respective plots post treatment and there was no significant difference in plot resistance to evapotranspiration or carbon exchange. Our results show that canopy removal alone has little impact on bryophyte ecohydrology in the short/medium term. This resistance to disturbance contrasts strongly with dramatic short-term changes observed within mineral soils suggesting that concurrent shifts in the large scale hydrology induced within such disturbances are necessary to cause rapid ecohydrological transitions. Understanding this lagged response is critical to determine the decadal response of carbon and water fluxes in response to disturbance and the rate at which important medium term ecohydrological feedbacks are invoked.

  7. Are leaf chemistry signatures preserved at the canopy level?

    Energy Technology Data Exchange (ETDEWEB)

    Borel, C.C.; Gerstl, S.A.W.

    1994-05-01

    Imaging spectrometers have the potential to be very useful in remote sensing of canopy chemistry constituents such as nitrogen and lignin. In this study under the HIRIS project the question of how leaf chemical composition which is reflected in leaf spectral features in the reflectance and transmittance is affected by canopy architecture was investigated. Several plants were modeled with high fidelity and a radiosity model was used to compute the canopy spectral signature over the visible and near infrared. We found that chemical constituent specific signatures such as absorptions are preserved and in the case of low absorption are actually enhanced. For moderately dense canopies the amount of a constituent depends also on the total leaf area.

  8. Development of a multispectral sensor for crop canopy temperature measurement

    Science.gov (United States)

    Quantifying spatial and temporal variability in plant stress has precision agriculture applications in controlling variable rate irrigation and variable rate nutrient application. One approach to plant stress detection is crop canopy temperature measurement by the use of thermographic or radiometric...

  9. Bias in lidar-based canopy gap fraction estimates

    NARCIS (Netherlands)

    Vaccari, S.; Leeuwen, van M.; Calders, K.; Coops, N.C.; Herold, M.

    2013-01-01

    Leaf area index and canopy gap fraction (GF) provide important information to forest managers regarding the ecological functioning and productivity of forest resources. Traditional measurements such as those obtained from hemispherical photography (HP) measure solar irradiation, penetrating the fore

  10. Flow past 2-D Hemispherical Rigid Canopies

    Science.gov (United States)

    Carnasciali, Maria-Isabel

    2013-11-01

    The flow past a 2-dimensional rigid hemispherical shape is investigated using PIV. Flow field measurements and images were generated with the use of a Thermoflow® apparatus. Results of this study are compared to prior work (APS DFD 2012 Session E9.00003) which employed CFD to investigate the flow in the near wake of hemispherical parachutes. The various sized gaps/open areas were positioned at distinct locations. The work presented here is part of a larger research project to investigate flow fields in deceleration devices and parachutes. Understanding the pitch-stability of parachutes is essential for accurate design and implementation of these deceleration devices but they present a difficult system to analyze. The flexibility of the parachute fabric results in large variations in the parachute geometry leading to complex fluid-structure interactions. Such flow, combined with flow through gaps and open areas, has been postulated to shed alternating vortices causing pitching/oscillations of the canopy. The results presented provide some insight into which geometric features affect vortex shedding and may enable the redesign of the baseline parachute to minimize instabilities.

  11. Constraining canopy biophysical simulations with MODIS reflectance data

    Science.gov (United States)

    Drewry, D. T.; Duveiller, G.

    2013-05-01

    Modern vegetation models incorporate ecophysiological details that allow for accurate estimates of carbon dioxide uptake, water use and energy exchange, but require knowledge of dynamic structural and biochemical traits. Variations in these traits are controlled by genetic factors as well as growth stage and nutrient and moisture availability, making them difficult to predict and prone to significant error. Here we explore the use of MODIS optical reflectance data for constraining key canopy- and leaf-level traits required by forward biophysical models. A multi-objective optimization algorithm is used to invert the PROSAIL canopy radiation transfer model, which accounts for the effects of leaf-level optical properties, foliage distribution and orientation on canopy reflectance across the optical range. Inversions are conducted for several growing seasons for both soybean and maize at several sites in the Central US agro-ecosystem. These inversions provide estimates of seasonal variations, and associated uncertainty, of variables such as leaf area index (LAI) that are then used as inputs into the MLCan biophysical model to conduct forward simulations. MLCan characterizes the ecophysiological functioning of a plant canopy at a half-hourly timestep, and has been rigorously validated for both C3 and C4 crops against observations of canopy CO2 uptake, evapotranspiration and sensible heat exchange across a wide range of meteorological conditions. The inversion-derived canopy properties are used to examine the ability of MODIS data to characterize seasonal variations in canopy properties in the context of a detailed forward canopy biophysical model, and the uncertainty induced in forward model estimates as a function of the uncertainty in the inverted parameters. Special care is made to ensure that the satellite observations match adequately, in both time and space, with the coupled model simulations. To do so, daily MODIS observations are used and a validated model of

  12. Heterogeneity Analysis of Cucumber Canopy in the Solar Greenhouse

    Institute of Scientific and Technical Information of China (English)

    QIAN Ting-ting; LU Sheng-lian; ZHAO Chun-jiang; GUO Xin-yu; WEN Wei-liang; DU jian-jun

    2014-01-01

    Detailed analysis of canopy structural heterogeneity is an essential step in conducting parameters for a canopy structural model. This paper aims to analyze the structural heterogeneity of a cucumber (Cucumis sativus L.) canopy by means of analyzing leaf distribution in a greenhouse environment with natural sunlight and also to assess the effect of structural canopy heterogeneity on light interception and photosynthesis. Two experiments and four measurements were carried out in autumn 2011 and spring 2012. A static virtual three-dimensional (3D) canopy structure was reconstructed using a 3D digitizing method. The diurnal variation of photosynthesis rate was measured using CIRAS-2 photosynthesis system. The results showed that, leaf azimuth as tested with the Rayleigh-test was homogeneous at vine tip over stage but turned heterogeneous at fruit harvest stage. After eliminating the inlfuence of the environment on the azimuth using the von Mises-Fisher method, the angle between two successive leaves was 144°;at the same time, a rule for the azimuth distribution in the canopy was established, stating that the azimuth distribution in cucumber followed a law which was positive spin and anti-spin. Leaf elevation angle of south-oriented leaves was on average 13.8° higher than that of north-oriented leaves. The horizontal distribution of light interception and photosynthesis differed signiifcantly between differently oriented leaves. East-and west-oriented leaves exhibited the highest photosynthetic rate. In conclusion, detailed analysis of canopy structural heterogeneity in this study indicated that leaf azimuth and elevation angle were heterogeneous in cucumber canopy and they should be explicitly described as they have a great impact both on light distribution and photosynthesis.

  13. Sensitivity of LIDAR Canopy Height Estimate to Geolocation Error

    Science.gov (United States)

    Tang, H.; Dubayah, R.

    2010-12-01

    Many factors affect the quality of canopy height structure data derived from space-based lidar such as DESDynI. Among these is geolocation accuracy. Inadequate geolocation information hinders subsequent analyses because a different portion of the canopy is observed relative to what is assumed. This is especially true in mountainous terrain where the effects of slope magnify geolocation errors. Mission engineering design must trade the expense of providing more accurate geolocation with the potential improvement in measurement accuracy. The objective of our work is to assess the effects of small errors in geolocation on subsequent retrievals of maximum canopy height for a varying set of canopy structures and terrains. Dense discrete lidar data from different forest sites (from La Selva Biological Station, Costa Rica, Sierra National Forest, California, and Hubbard Brook and Bartlett Experimental Forests in New Hampshire) are used to simulate DESDynI height retrievals using various geolocation accuracies. Results show that canopy height measurement errors generally increase as the geolocation error increases. Interestingly, most of the height errors are caused by variation of canopy height rather than topography (slope and aspect).

  14. Flow over a Modern Ram-Air Parachute Canopy

    Science.gov (United States)

    Mohammadi, Mohammad; Johari, Hamid

    2010-11-01

    The flow field on the central section of a modern ram-air parachute canopy was examined numerically using a finite-volume flow solver coupled with the one equation Spalart-Allmaras turbulence model. Ram-air parachutes are used for guided airdrop applications, and the canopy resembles a wing with an open leading edge for inflation. The canopy surfaces were assumed to be impermeable and rigid. The flow field consisted of a vortex inside the leading edge opening which effectively closed off the canopy and diverted the flow around the leading edge. The flow experienced a rather bluff leading edge in contrast to the smooth leading of an airfoil, leading to a separation bubble on the lower lip of the canopy. The flow inside the canopy was stagnant beyond the halfway point. The section lift coefficient increased linearly with the angle of attack up to 8.5 and the lift curve slope was about 8% smaller than the baseline airfoil. The leading edge opening had a major effect on the drag prior to stall; the drag is at least twice the baseline airfoil drag. The minimum drag of the section occurs over the angle of attack range of 3 -- 7 .

  15. Estimating canopy fuel parameters for Atlantic Coastal Plain forest types.

    Energy Technology Data Exchange (ETDEWEB)

    Parresol, Bernard, R.

    2007-01-15

    Abstract It is necessary to quantify forest canopy characteristics to assess crown fire hazard, prioritize treatment areas, and design treatments to reduce crown fire potential. A number of fire behavior models such as FARSITE, FIRETEC, and NEXUS require as input four particular canopy fuel parameters: 1) canopy cover, 2) stand height, 3) crown base height, and 4) canopy bulk density. These canopy characteristics must be mapped across the landscape at high spatial resolution to accurately simulate crown fire. Currently no models exist to forecast these four canopy parameters for forests of the Atlantic Coastal Plain, a region that supports millions of acres of loblolly, longleaf, and slash pine forests as well as pine-broadleaf forests and mixed species broadleaf forests. Many forest cover types are recognized, too many to efficiently model. For expediency, forests of the Savannah River Site are categorized as belonging to 1 of 7 broad forest type groups, based on composition: 1) loblolly pine, 2) longleaf pine, 3) slash pine, 4) pine-hardwood, 5) hardwood-pine, 6) hardwoods, and 7) cypress-tupelo. These 7 broad forest types typify forests of the Atlantic Coastal Plain region, from Maryland to Florida.

  16. CANOPY STRUCTURE AND DEPOSITION EFFICIENCY OF VINEYARD SPRAYERS

    Directory of Open Access Journals (Sweden)

    Gianfranco Pergher

    2007-06-01

    Full Text Available A field study was performed to analyse how deposition efficiency from an axial-fan sprayer was affected by the canopy structure of vines trained to the High Cordon, Low Cordon and Casarsa systems, at beginning of flowering and beginning of berry touch growth stages. An empirical calibration method, providing a dose rate adjustment roughly proportional to canopy height, was used. The canopy structure was assessed using the Point Quadrat method, and determining the leaf area index (LAI and the leaf layer index (LLI. Spray deposits were measured by colorimetry, using a water soluble dye (Tartrazine as a tracer. Correlation between deposits and canopy parameters were analysed and discussed. Foliar deposits per unit leaf area were relatively constant, suggesting that empirical calibration can reduce deposit variability associated with different training systems and growth stages. Total foliar deposition ranged from 33.6% and 82.3% of total spray volume, and increased proportionally with the LLI up to LLI<4. Deposits on bunches significantly decreased with the LLI in the grape zone. The results suggest that sprayer efficiency is improved by a regular, symmetrical canopy, with few leaf layers in the grape zone as in Low Cordon. However, a LLI<3 over the whole canopy and >40% gaps in the foliage both reduced total deposition, and may increase the risk for larger drift losses.

  17. Isotopic characteristics of canopies in simulated leaf assemblages

    Science.gov (United States)

    Graham, Heather V.; Patzkowsky, Mark E.; Wing, Scott L.; Parker, Geoffrey G.; Fogel, Marilyn L.; Freeman, Katherine H.

    2014-11-01

    The geologic history of closed-canopy forests is of great interest to paleoecologists and paleoclimatologists alike. Closed canopies have pronounced effects on local, continental and global rainfall and temperature patterns. Although evidence for canopy closure is difficult to reconstruct from the fossil record, the characteristic isotope gradients of the "canopy effect" could be preserved in leaves and proxy biomarkers. To assess this, we employed new carbon isotopic data for leaves collected in diverse light environments within a deciduous, temperate forest (Maryland, USA) and for leaves from a perennially closed canopy, moist tropical forest (Bosque Protector San Lorenzo, Panamá). In the tropical forest, leaf carbon isotope values range 10‰, with higher δ13Cleaf values occurring both in upper reaches of the canopy, and with higher light exposure and lower humidity. Leaf fractionation (Δleaf) varied negatively with height and light and positively with humidity. Vertical 13C enrichment in leaves largely reflects changes in Δleaf, and does not trend with δ13C of CO2 within the canopy. At the site in Maryland, leaves express a more modest δ13C range (∼6‰), with a clear trend that follows both light and leaf height. Using a model we simulate leaf assemblage isotope patterns from canopy data binned by elevation. The re-sampling (bootstrap) model determined both the mean and range of carbon isotope values for simulated leaf assemblages ranging in size from 10 to over 1000 leaves. For the tropical forest data, the canopy's isotope range is captured with 50 or more randomly sampled leaves. Thus, with a sufficient number of fossil leaves it is possible to distinguish isotopic gradients in an ancient closed canopy forest from those in an open forest. For very large leaf assemblages, mean isotopic values approximate the δ13C of carbon contributed by leaves to soil and are similar to observed δ13Clitter values at forested sites within Panamá, including the

  18. Canopy position has a profound effect on soybean seed composition

    Directory of Open Access Journals (Sweden)

    Steven C. Huber

    2016-09-01

    Full Text Available Although soybean seeds appear homogeneous, their composition (protein, oil and mineral concentrations can vary significantly with the canopy position where they were produced. In studies with 10 cultivars grown over a 3-yr period, we found that seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy. Among cultivars, mean protein concentration (average of different positions correlated positively with mean concentrations of S, Zn and Fe, but not other minerals. Therefore, on a whole plant basis, the uptake and allocation of S, Zn and Fe to seeds correlated with the production and allocation of reduced N to seed protein; however, the reduced N and correlated minerals (S, Zn and Fe showed different patterns of allocation among node positions. For example, while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position. Altering the microenvironment within the soybean canopy by removing neighboring plants at flowering increased protein concentration in particular at lower node positions and thus altered the node-position gradient in protein (and oil without altering the distribution of Mg, Fe and Cu, suggesting different underlying control mechanisms. Metabolomic analysis of developing seeds at different positions in the canopy suggests that availability of free asparagine may be a positive determinant of storage protein accumulation in seeds and may explain the increased protein accumulation in seeds produced at the top of the canopy. Our results establish node-position variation in seed constituents and provide a new experimental system to identify genes controlling key aspects of seed composition. In addition, our results provide an unexpected and simple approach to link agronomic practices to improve human

  19. Canopy position has a profound effect on soybean seed composition

    Science.gov (United States)

    Ulanov, Alexander; DeMuro, Catherine M.

    2016-01-01

    Although soybean seeds appear homogeneous, their composition (protein, oil and mineral concentrations) can vary significantly with the canopy position where they were produced. In studies with 10 cultivars grown over a 3-yr period, we found that seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy. Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals. Therefore, on a whole plant basis, the uptake and allocation of S, Zn and Fe to seeds correlated with the production and allocation of reduced N to seed protein; however, the reduced N and correlated minerals (S, Zn and Fe) showed different patterns of allocation among node positions. For example, while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position. Altering the microenvironment within the soybean canopy by removing neighboring plants at flowering increased protein concentration in particular at lower node positions and thus altered the node-position gradient in protein (and oil) without altering the distribution of Mg, Fe and Cu, suggesting different underlying control mechanisms. Metabolomic analysis of developing seeds at different positions in the canopy suggests that availability of free asparagine may be a positive determinant of storage protein accumulation in seeds and may explain the increased protein accumulation in seeds produced at the top of the canopy. Our results establish node-position variation in seed constituents and provide a new experimental system to identify genes controlling key aspects of seed composition. In addition, our results provide an unexpected and simple approach to link agronomic practices to improve human nutrition and health

  20. The Canopy Conductance of a Humid Grassland

    Science.gov (United States)

    Lu, C. T.; Hsieh, C. I.

    2015-12-01

    Penman-Monteith equation is widely used for estimating latent heat flux. The key parameter for implementing this equation is the canopy conductance (gc). Recent research (Blaken and Black, 2004) showed that gc could be well parameterized by a linear function of An/ (D0* X0c), where An represents net assimilation, D0 is leaf level saturation deficit, and X0c is CO2 mole fraction. In this study, we tried to use the same idea for estimating gcfor a humid grassland. The study site was located in County Cork, southwest Ireland (51o59''N 8o46''W), and perennial ryegrass (Lolium perenne L.) was the dominant grass species in this area. An eddy covariance system was used to measure the latent heat flux above this humid grassland. The measured gc was calculated by rearranging Penman-Monteith equation combined with the measured latent heat flux. Our data showed that the gc decreased as the vapor pressure deficit and temperature increased. And it increased as the net radiation increased. Therefore, we found out that the best parameterization of gc was a linear function of the product of the vapor deficit, temperature, and net radiation. Also, we used the gc which was estimated by this linear function to predict the latent heat flux by Penman-Monteith equation and compared the predictions with those where the gc was chosen to be a fixed value. Our analysis showed that this simple linear function for gc can improve the latent heat flux predictions (R square increased from 0.48 to 0.66).

  1. Depletion of gaseous polycyclic aromatic hydrocarbons by a forest canopy

    Directory of Open Access Journals (Sweden)

    S.-D. Choi

    2008-07-01

    Full Text Available Rapid uptake of gaseous polycyclic aromatic hydrocarbons (PAHs by a forest canopy was observed at Borden in Southern Ontario, Canada during bud break in early spring 2003. High volume air samples were taken on 12 individual days at three different heights (44.4, 29.1, and 16.7 m on a scaffolding tower and on the forest floor below the canopy (1.5 m. Concentrations of PAHs were positively correlated to ambient temperature, resulting from relatively warm and polluted air masses passing over the Eastern United States and Toronto prior to arriving at the sampling site. An analysis of vertical profiles and gas/particle partitioning of the PAHs showed that gaseous PAHs established a concentration gradient with height, whereas levels of particulate PAHs were relatively uniform, implying that only the uptake of gaseous PAHs by the forest canopy was sufficiently rapid to be observed. Specifically, the gaseous concentrations of intermediate PAHs, such as phenanthrene, anthracene, and pyrene, during budburst and leaf emergence were reduced within and above the canopy. When a gradient was observed, the percentage of PAHs on particles increased at the elevations experiencing a decrease in gas phase concentrations. The uptake of intermediate PAHs by the canopy also led to significant differences in gaseous PAH composition with height. These results are the most direct evidence yet of the filter effect of forest canopies for gaseous PAHs in early spring. PAH deposition fluxes and dry gaseous deposition velocities to the forest canopy were estimated from the concentration gradients.

  2. Canopy Interception for a Tallgrass Prairie under Juniper Encroachment.

    Science.gov (United States)

    Zou, Chris B; Caterina, Giulia L; Will, Rodney E; Stebler, Elaine; Turton, Donald

    2015-01-01

    Rainfall partitioning and redistribution by canopies are important ecohydrological processes underlying ecosystem dynamics. We quantified and contrasted spatial and temporal variations of rainfall redistribution for a juniper (Juniperus virginiana, redcedar) woodland and a tallgrass prairie in the south-central Great Plains, USA. Our results showed that redcedar trees had high canopy storage capacity (S) ranging from 2.14 mm for open stands to 3.44 mm for closed stands. The canopy funneling ratios (F) of redcedar trees varied substantially among stand type and tree size. The open stands and smaller trees usually had higher F values and were more efficient in partitioning rainfall into stemflow. Larger trees were more effective in partitioning rainfall into throughfall and no significant changes in the total interception ratios among canopy types and tree size were found. The S values were highly variable for tallgrass prairie, ranging from 0.27 mm at early growing season to 3.86 mm at senescence. As a result, the rainfall interception by tallgrass prairie was characterized by high temporal instability. On an annual basis, our results showed no significant difference in total rainfall loss to canopy interception between redcedar trees and tallgrass prairie. Increasing structural complexity associated with redcedar encroachment into tallgrass prairie changes the rainfall redistribution and partitioning pattern at both the temporal and spatial scales, but does not change the overall canopy interception ratios compared with unburned and ungrazed tallgrass prairie. Our findings support the idea of convergence in interception ratio for different canopy structures under the same precipitation regime. The temporal change in rainfall interception loss from redcedar encroachment is important to understand how juniper encroachment will interact with changing rainfall regime and potentially alter regional streamflow under climate change.

  3. Canopy Interception for a Tallgrass Prairie under Juniper Encroachment.

    Directory of Open Access Journals (Sweden)

    Chris B Zou

    Full Text Available Rainfall partitioning and redistribution by canopies are important ecohydrological processes underlying ecosystem dynamics. We quantified and contrasted spatial and temporal variations of rainfall redistribution for a juniper (Juniperus virginiana, redcedar woodland and a tallgrass prairie in the south-central Great Plains, USA. Our results showed that redcedar trees had high canopy storage capacity (S ranging from 2.14 mm for open stands to 3.44 mm for closed stands. The canopy funneling ratios (F of redcedar trees varied substantially among stand type and tree size. The open stands and smaller trees usually had higher F values and were more efficient in partitioning rainfall into stemflow. Larger trees were more effective in partitioning rainfall into throughfall and no significant changes in the total interception ratios among canopy types and tree size were found. The S values were highly variable for tallgrass prairie, ranging from 0.27 mm at early growing season to 3.86 mm at senescence. As a result, the rainfall interception by tallgrass prairie was characterized by high temporal instability. On an annual basis, our results showed no significant difference in total rainfall loss to canopy interception between redcedar trees and tallgrass prairie. Increasing structural complexity associated with redcedar encroachment into tallgrass prairie changes the rainfall redistribution and partitioning pattern at both the temporal and spatial scales, but does not change the overall canopy interception ratios compared with unburned and ungrazed tallgrass prairie. Our findings support the idea of convergence in interception ratio for different canopy structures under the same precipitation regime. The temporal change in rainfall interception loss from redcedar encroachment is important to understand how juniper encroachment will interact with changing rainfall regime and potentially alter regional streamflow under climate change.

  4. Simulation of Snow Processes Beneath a Boreal Scots Pine Canopy

    Institute of Scientific and Technical Information of China (English)

    LI Weiping; LUO Yong; XIA Kun; LIU Xin

    2008-01-01

    A physically-based multi-layer snow model Snow-Atmosphere-Soil-Transfer scheme (SAST) and a land surface model Biosphere-Atmosphere Transfer Scheme (BATS) were employed to investigate how boreal forests influence snow accumulation and ablation under the canopy. Mass balance and energetics of snow beneath a Scots pine canopy in Finland at different stages of the 2003-2004 and 2004-2005 snow seasons are analyzed. For the fairly dense Scots pine forest, drop-off of the canopy-intercepted snow contributes, in some cases, twice as much to the underlying snowpack as the direct throughfall of snow. During early winter snow melting, downward turbulent sensible and condensation heat fluxes play a dominant role together with downward net longwave radiation. In the final stage of snow ablation in middle spring, downward net all-wave radiation dominates the snow melting. Although the downward sensible heat flux is comparable to the net solar radiation during this period, evaporative cooling of the melting snow surface makes the turbulent heat flux weaker than net radiation. Sensitivities of snow processes to leaf area index (LAI) indicate that a denser canopy speeds up early winter snowmelt, but also suppresses melting later in the snow season. Higher LAI increases the interception of snowfall, therefore reduces snow accumulation under the canopy during the snow season; this effect and the enhancement of downward longwave radiation by denser foliage outweighs the increased attenuation of solar radiation, resulting in earlier snow ablation under a denser canopy. The difference in sensitivities to LAI in two snow seasons implies that the impact of canopy density on the underlying snowpack is modulated by interannual variations of climate regimes.

  5. Throughfall deposition and canopy exchange processes along a vertical gradient within the canopy of beech (Fagus sylvatica L.) and Norway spruce (Picea abies (L.) Karst).

    Science.gov (United States)

    Adriaenssens, Sandy; Hansen, Karin; Staelens, Jeroen; Wuyts, Karen; De Schrijver, An; Baeten, Lander; Boeckx, Pascal; Samson, Roeland; Verheyen, Kris

    2012-03-15

    To assess the impact of air pollution on forest ecosystems, the canopy is usually considered as a constant single layer in interaction with the atmosphere and incident rain, which could influence the measurement accuracy. In this study the variation of througfall deposition and derived dry deposition and canopy exchange were studied along a vertical gradient in the canopy of one European beech (Fagus sylvatica L.) tree and two Norway spruce (Picea abies (L.) Karst) trees. Throughfall and net throughfall deposition of all ions other than H(+) increased significantly with canopy depth in the middle and lower canopy of the beech tree and in the whole canopy of the spruce trees. Moreover, throughfall and net throughfall of all ions in the spruce canopy decreased with increasing distance to the trunk. Dry deposition occurred mainly in the upper canopy and was highest during the growing season for H(+), NH(4)(+), NO(3)(-) and highest during the dormant season for Na(+), Cl(-), SO(4)(2-) (beech and spruce) and K(+), Ca(2+) and Mg(2+) (spruce only). Canopy leaching of K(+), Ca(2+) and Mg(2+) was observed at all canopy levels and was higher for the beech tree compared to the spruce trees. Canopy uptake of inorganic nitrogen and H(+) occurred mainly in the upper canopy, although significant canopy uptake was found in the middle canopy as well. Canopy exchange was always higher during the growing season compared to the dormant season. This spatial and temporal variation indicates that biogeochemical deposition models would benefit from a multilayer approach for shade-tolerant tree species such as beech and spruce.

  6. Characterization of Canopy Layering in Forested Ecosystems Using Full Waveform Lidar

    Science.gov (United States)

    Whitehurst, Amanda S.; Swatantran, Anu; Blair, J. Bryan; Hofton, Michelle A.; Dubayah, Ralph

    2013-01-01

    Canopy structure, the vertical distribution of canopy material, is an important element of forest ecosystem dynamics and habitat preference. Although vertical stratification, or "canopy layering," is a basic characterization of canopy structure for research and forest management, it is difficult to quantify at landscape scales. In this paper we describe canopy structure and develop methodologies to map forest vertical stratification in a mixed temperate forest using full-waveform lidar. Two definitions-one categorical and one continuous-are used to map canopy layering over Hubbard Brook Experimental Forest, New Hampshire with lidar data collected in 2009 by NASA's Laser Vegetation Imaging Sensor (LVIS). The two resulting canopy layering datasets describe variation of canopy layering throughout the forest and show that layering varies with terrain elevation and canopy height. This information should provide increased understanding of vertical structure variability and aid habitat characterization and other forest management activities.

  7. Characterization of Canopy Layering in Forested Ecosystems Using Full Waveform Lidar

    Directory of Open Access Journals (Sweden)

    Ralph Dubayah

    2013-04-01

    Full Text Available Canopy structure, the vertical distribution of canopy material, is an important element of forest ecosystem dynamics and habitat preference. Although vertical stratification, or “canopy layering,” is a basic characterization of canopy structure for research and forest management, it is difficult to quantify at landscape scales. In this paper we describe canopy structure and develop methodologies to map forest vertical stratification in a mixed temperate forest using full-waveform lidar. Two definitions—one categorical and one continuous—are used to map canopy layering over Hubbard Brook Experimental Forest, New Hampshire with lidar data collected in 2009 by NASA’s Laser Vegetation Imaging Sensor (LVIS. The two resulting canopy layering datasets describe variation of canopy layering throughout the forest and show that layering varies with terrain elevation and canopy height. This information should provide increased understanding of vertical structure variability and aid habitat characterization and other forest management activities.

  8. A comparison of models to estimate in-canopy photosynthetically active radiation and their influence on canopy stomatal resistance

    Science.gov (United States)

    Zhang, Leiming; Moran, Michael D.; Brook, Jeffrey R.

    The models for photosynthetically active radiation (PAR) used in a multi-layer canopy stomatal resistance (CSR) model developed by Baldocchi et al. (Atmospheric Environment 21 (1987) 91-101) and in a two-big-leaf CSR model developed by Hicks et al. (Water, Air and Soil Pollution 36 (1987) 311) are investigated in this study. The PAR received by shaded leaves in Baldocchi et al. (1987) is found to be larger than that predicted by a canopy radiative-transfer model developed by Norman (in: Barfield, Gerber, (Eds.), Modification of the Aerial Environment of Crops. ASAE Monograph No. 2. American Society for Agricultural. Engineering, St. Joseph, MI, 1979, p. 249) by as much as 50% even though the Baldocchi et al. (1987) model is indirectly based on Norman's model. This larger value of PAR results in turn in a smaller CSR by as much as 30% for canopies with larger leaf area indexes. A new formula to predict vertical profiles for PAR received by shaded leaves inside a canopy is suggested in the present study based on Norman (1979) and agrees well with the original model of Norman (1979). The simple treatment used in Hicks et al. (1987) for canopy-average PAR received by shaded leaves is found to diverge for canopies with leaf area indexes not close to two A new empirical formula for canopy-average PAR is then suggested for use in a two-big-leaf model, and it is shown that under most conditions the modified two-big-leaf CSR model can predict reasonable values when compared with the more complex multi-layer CSR model. Both the modified multi-layer CSR model and the modified two-big-leaf CSR model are also shown to predict reasonable dry deposition velocities for O 3 when compared to several sets of measurements.

  9. Advances in Nitrogen Loss Leached by Precipitation from Plant Canopy

    Institute of Scientific and Technical Information of China (English)

    LI Shi-qing; JI Chun-rong; FANG Ya-ning; CHEN Xiao-li; LI Sheng-xiu

    2008-01-01

    Function of canopy in changing nutrient cycle and flux is one of the focuses in recent years. On the basis of comprehensively appraising published research, we analyzed the nitrogen loss leaching from plant canopy and several factors which affected it. We pointed out the disadvantages of the published researches and the key issues that ought to be solved: (1) The menstruation need to be advanced, and the research should be carried out on nitrogen loss leaching from the canopy of the field plant. (2) If the nitrogen is leached from the plant canopy, the research on the type of nitrogen loss should be carried out, and the nitrogen use efficiency of different varieties should be dealt on a research perspective with regard to the nitrogen leaching. (3) The research should be conducted on the mechanism and pathway, and the progress of nitrogen leaching; and the factors affecting nitrogen leaching should be included in the research, such as the leaf area of different growth stages, stomata densities, stomata conductance, and the apparent free space, which are beneficial to explain the mechanism of nitrogen leaching from the plant canopy.

  10. Performance of an Ultrasonic Ranging Sensor in Apple Tree Canopies

    Directory of Open Access Journals (Sweden)

    Alexandre Escolà

    2011-02-01

    Full Text Available Electronic canopy characterization is an important issue in tree crop management. Ultrasonic and optical sensors are the most used for this purpose. The objective of this work was to assess the performance of an ultrasonic sensor under laboratory and field conditions in order to provide reliable estimations of distance measurements to apple tree canopies. To this purpose, a methodology has been designed to analyze sensor performance in relation to foliage ranging and to interferences with adjacent sensors when working simultaneously. Results show that the average error in distance measurement using the ultrasonic sensor in laboratory conditions is ±0.53 cm. However, the increase of variability in field conditions reduces the accuracy of this kind of sensors when estimating distances to canopies. The average error in such situations is ±5.11 cm. When analyzing interferences of adjacent sensors 30 cm apart, the average error is ±17.46 cm. When sensors are separated 60 cm, the average error is ±9.29 cm. The ultrasonic sensor tested has been proven to be suitable to estimate distances to the canopy in field conditions when sensors are 60 cm apart or more and could, therefore, be used in a system to estimate structural canopy parameters in precision horticulture.

  11. Emergence time in forest bats: the influence of canopy closure

    Science.gov (United States)

    Russo, Danilo; Cistrone, Luca; Jones, Gareth

    2007-01-01

    The role of the forest canopy in protecting bats roosting in forest from predators is poorly known. We analysed the effect of canopy closure on emergence time in Barbastella barbastellus in a mountainous area of central Italy. We used radio-tracking to locate roosts and filmed evening emergence. Comparisons were made between roosts in open areas and those in dense forest. Median emergence time and illuminance were correlated. Moreover, from pregnancy to late lactation bats emerged progressively earlier, probably because of the exceptionally high wing loading affecting pregnant bats and the high energy demand of lactation. A significant influence of canopy closure on median emergence time was revealed after adjusting for the effects of light and reproductive state. Bats in open habitat emerged later than those roosting beneath closed canopy. In cluttered habitats, predators relying on vision may find it more difficult to detect and catch bats at light levels which would offer more chances of success when attacking prey in open habitats. Bats in dense forest are less vulnerable to predators and may take advantage of an earlier emergence by prolonging foraging. Although more vulnerable, lactating females roosting at open sites may benefit from warmer roosting conditions. Roosts in dense forest may be preferred under intense predation pressure. Forest management should favour canopy heterogeneity to provide bats with a range of roosting conditions. Our work emphasises the role of a fine-grained spatial scale in the roosting ecology of forest bats.

  12. Performance of an ultrasonic ranging sensor in apple tree canopies.

    Science.gov (United States)

    Escolà, Alexandre; Planas, Santiago; Rosell, Joan Ramon; Pomar, Jesús; Camp, Ferran; Solanelles, Francesc; Gracia, Felip; Llorens, Jordi; Gil, Emilio

    2011-01-01

    Electronic canopy characterization is an important issue in tree crop management. Ultrasonic and optical sensors are the most used for this purpose. The objective of this work was to assess the performance of an ultrasonic sensor under laboratory and field conditions in order to provide reliable estimations of distance measurements to apple tree canopies. To this purpose, a methodology has been designed to analyze sensor performance in relation to foliage ranging and to interferences with adjacent sensors when working simultaneously. Results show that the average error in distance measurement using the ultrasonic sensor in laboratory conditions is ±0.53 cm. However, the increase of variability in field conditions reduces the accuracy of this kind of sensors when estimating distances to canopies. The average error in such situations is ±5.11 cm. When analyzing interferences of adjacent sensors 30 cm apart, the average error is ±17.46 cm. When sensors are separated 60 cm, the average error is ±9.29 cm. The ultrasonic sensor tested has been proven to be suitable to estimate distances to the canopy in field conditions when sensors are 60 cm apart or more and could, therefore, be used in a system to estimate structural canopy parameters in precision horticulture.

  13. A comparative quadrant analysis of turbulence in a plant canopy

    Science.gov (United States)

    Yue, Wusi; Meneveau, Charles; Parlange, Marc B.; Zhu, Weihong; van Hout, René; Katz, Joseph

    2007-05-01

    Large-eddy simulation (LES) of turbulence in plant canopies has traditionally been validated using bulk statistical quantities such as mean velocity and variance profiles. However, turbulent exchanges between a plant canopy and the atmosphere are dominated by large-scale coherent structures, and therefore LES must also be validated using statistical tools that are sensitive to details of coherent structures. In this study, LES and measurements using particle image velocimetry (PIV) are compared near the top of the canopy by means of a quadrant-hole analysis of turbulent kinetic energy, vorticity, and dissipation rate. The LES resolves coarse features of individual corn plants and uses the Lagrangian scale-dependent dynamic subgrid model. At the measurement location, there is good agreement between the LES predictions and the field data in terms of most conditionally sampled quantities, confirming the applicability of LES for fundamental studies of vegetation-air interactions and coherent structures. The simulation results confirm that sweeps (the fourth-quadrant events) contribute the largest fraction of turbulent kinetic energy, vorticity, and dissipation rate inside the plant canopy. The magnitudes of the vorticity and dissipation rate at the top of the canopy are highest in the first quadrant (rare events of outward interactions).

  14. Eo-1 Hyperion Measures Canopy Drought Stress In Amazonia

    Science.gov (United States)

    Asner, Gregory P.; Nepstad, Daniel; Cardinot, Gina; Moutinho, Paulo; Harris, Thomas; Ray, David

    2004-01-01

    The central, south and southeast portions of the Amazon Basin experience a period of decreased cloud cover and precipitation from June through November. There are likely important effects of seasonal and interannual rainfall variation on forest leaf area index, canopy water stress, productivity and regional carbon cycling in the Amazon. While both ground and spaceborne studies of precipitation continue to improve, there has been almost no progress made in observing forest canopy responses to rainfall variability in the humid tropics. This shortfall stems from the large stature of the vegetation and great spatial extent of tropical forests, both of which strongly impede field studies of forest responses to water availability. Those few studies employing satellite measures of canopy responses to seasonal and interannual drought (e.g., Bohlman et al. 1998, Asner et al. 2000) have been limited by the spectral resolution and sampling available from Landsat and AVHRR sensors. We report on a study combining the first landscape-level, managed drought experiment in Amazon tropical forest with the first spaceborne imaging spectrometer observations of this experimental area. Using extensive field data on rainfall inputs, soil water content, and both leaf and canopy responses, we test the hypothesis that spectroscopic signatures unique to hyperspectral observations can be used to quantify relative differences in canopy stress resulting from water availability.

  15. Canopy Spectral Invariants. Part 1: A New Concept in Remote Sensing of Vegetation

    Science.gov (United States)

    Knyazikhin, Yuri; Schull, Mitchell A.; Xu, Liang; Myneni, Ranga B.; Samanta, Arindam

    2011-01-01

    The concept of canopy spectral invariants expresses the observation that simple algebraic combinations of leaf and canopy spectral reflectance become wavelength independent and determine two canopy structure specific variables the recollision and escape probabilities. These variables specify an accurate relationship between the spectral response of a vegetation canopy to incident solar radiation at the leaf and the canopy scale. They are sensitive to important structural features of the canopy such as forest cover, tree density, leaf area index, crown geometry, forest type and stand age. This paper presents the mathematical basis of the concept which is linked to eigenvalues and eigenvectors of the three-dimensional radiative transfer equation.

  16. Lidar point cloud representation of canopy structure for biomass estimation

    Science.gov (United States)

    Neuenschwander, A. L.; Krofcheck, D. J.; Litvak, M. E.

    2014-12-01

    Laser mapping systems (lidar) have become an essential remote sensing tool for determining local and regional estimates of biomass. Lidar data (possibly in conjunction with optical imagery) can be used to segment the landscape into either individual trees or clusters of trees. Canopy characteristics (i.e. max, mean height) for a segmented tree are typically derived from a rasterized canopy height model (CHM) and subsequently used in a regression model to estimate biomass. The process of rasterizing the lidar point cloud into a CHM, however, reduces the amount information about the tree structure. Here, we compute statistics for each segmented tree from the raw lidar point cloud rather than a rasterized CHM. Working directly from the lidar point cloud enables a more accurate representation of the canopy structure. Biomass estimates from the point cloud method are compared against biomass estimates derived from a CHM for a Juniper savanna in New Mexico.

  17. The pre-penumbral magnetic canopy in the solar atmosphere

    CERN Document Server

    MacTaggart, David; Zuccarello, Francesca

    2016-01-01

    Penumbrae are the manifestation of magnetoconvection in highly inclined (to the vertical direction) magnetic field. The penumbra of a sunspot tends to form, initially, along the arc of the umbra antipodal to the main region of flux emergence. The question of how highly inclined magnetic field can concentrate along the antipodal curves of umbrae, at least initially, remains to be answered. Previous observational studies have suggested the existence of some form of overlying magnetic canopy which acts as the progenitor for penumbrae. We propose that such overlying magnetic canopies are a consequence of how the magnetic field emerges into the atmosphere and are, therefore, part of the emerging region. We show, through simulations of twisted flux tube emergence, that canopies of highly inclined magnetic field form preferentially at the required locations above the photosphere.

  18. Improvement in Aerodynamic Characteristics of a Paraglider Wing Canopy

    Science.gov (United States)

    Mashud, Mohammad; Umemura, Akira

    To determine the parameters which can improve the overall performance of a paraglider wing canopy, we have been investigating the fundamental aerodynamic characteristics of an inflatable cell model which is designed to represent the dynamic behaviors of each cell comprising the wing canopy. This paper describes the results of a series of wind tunnel experiments. It is shown that significant drag reduction can be achieved by adopting an appropriately designed shape for the soft cloth comprising the upper surface. A trade-off relationship between the aerodynamic quality (characterized by the lift-to-drag ratio) and structural strength (characterized by the internal air pressure coefficient) of the canopy is also examined in detail.

  19. Remote sensing of vegetation canopy photosynthetic and stomatal conductance efficiencies

    Science.gov (United States)

    Myneni, R. B.; Ganapol, B. D.; Asrar, G.

    1992-01-01

    The problem of remote sensing the canopy photosynthetic and stomatal conductance efficiencies is investigated with the aid of one- and three-dimensional radiative transfer methods coupled to a semi-empirical mechanistic model of leaf photosynthesis and stomatal conductance. Desertlike vegetation is modeled as clumps of leaves randomly distributed on a bright dry soil with partial ground cover. Normalized difference vegetation index (NDVI), canopy photosynthetic (Ep), and stomatal efficiencies (Es) are calculated for various geometrical, optical, and illumination conditions. The contribution of various radiative fluxes to estimates of Ep is evaluated and the magnitude of errors in bulk canopy formulation of problem parameters are quantified. The nature and sensitivity of the relationship between Ep and Es to NDVI is investigated, and an algorithm is proposed for use in operational remote sensing.

  20. Convergent elevation trends in canopy chemical traits of tropical forests.

    Science.gov (United States)

    Asner, Gregory P; Martin, Roberta E

    2016-06-01

    The functional biogeography of tropical forests is expressed in foliar chemicals that are key physiologically based predictors of plant adaptation to changing environmental conditions including climate. However, understanding the degree to which environmental filters sort the canopy chemical characteristics of forest canopies remains a challenge. Here, we report on the elevation and soil-type dependence of forest canopy chemistry among 75 compositionally and environmentally distinct forests in nine regions, with a total of 7819 individual trees representing 3246 species collected, identified and assayed for foliar traits. We assessed whether there are consistent relationships between canopy chemical traits and both elevation and soil type, and evaluated the general role of phylogeny in mediating patterns of canopy traits within and across communities. Chemical trait variation and partitioning suggested a general model based on four interconnected findings. First, geographic variation at the soil-Order level, expressing broad changes in fertility, underpins major shifts in foliar phosphorus (P) and calcium (Ca). Second, elevation-dependent shifts in average community leaf dry mass per area (LMA), chlorophyll, and carbon allocation (including nonstructural carbohydrates) are most strongly correlated with changes in foliar Ca. Third, chemical diversity within communities is driven by differences between species rather than by plasticity within species. Finally, elevation- and soil-dependent changes in N, LMA and leaf carbon allocation are mediated by canopy compositional turnover, whereas foliar P and Ca are driven more by changes in site conditions than by phylogeny. Our findings have broad implications for understanding the global ecology of humid tropical forests, and their functional responses to changing climate.

  1. Does canopy nitrogen uptake enhance carbon sequestration by trees?

    Science.gov (United States)

    Nair, Richard K F; Perks, Micheal P; Weatherall, Andrew; Baggs, Elizabeth M; Mencuccini, Maurizio

    2016-02-01

    Temperate forest (15) N isotope trace experiments find nitrogen (N) addition-driven carbon (C) uptake is modest as little additional N is acquired by trees; however, several correlations of ambient N deposition against forest productivity imply a greater effect of atmospheric nitrogen deposition than these studies. We asked whether N deposition experiments adequately represent all processes found in ambient conditions. In particular, experiments typically apply (15) N to directly to forest floors, assuming uptake of nitrogen intercepted by canopies (CNU) is minimal. Additionally, conventional (15) N additions typically trace mineral (15) N additions rather than litter N recycling and may increase total N inputs above ambient levels. To test the importance of CNU and recycled N to tree nutrition, we conducted a mesocosm experiment, applying 54 g N/(15) N ha(-1)  yr(-1) to Sitka spruce saplings. We compared tree and soil (15) N recovery among treatments where enrichment was due to either (1) a (15) N-enriched litter layer, or mineral (15) N additions to (2) the soil or (3) the canopy. We found that 60% of (15) N applied to the canopy was recovered above ground (in needles, stem and branches) while only 21% of (15) N applied to the soil was found in these pools. (15) N recovery from litter was low and highly variable. (15) N partitioning among biomass pools and age classes also differed among treatments, with twice as much (15) N found in woody biomass when deposited on the canopy than soil. Stoichiometrically calculated N effect on C uptake from (15) N applied to the soil, scaled to real-world conditions, was 43 kg C kg N(-1) , similar to manipulation studies. The effect from the canopy treatment was 114 kg C kg N(-1) . Canopy treatments may be critical to accurately represent N deposition in the field and may address the discrepancy between manipulative and correlative studies.

  2. Experimental canopy removal enhances diversity of vernal pond amphibians.

    Science.gov (United States)

    Skelly, David K; Bolden, Susan R; Freidenburg, L Kealoha

    2014-03-01

    Vernal ponds are often treated as protected environments receiving special regulation and management. Within the landscapes where they are found, forest vegetation frequently dominates surrounding uplands and can grow to overtop and shade pond basins. Two bodies of research offer differing views of the role of forest canopy for vernal pond systems. Studies of landscape conversion suggest that removing forest overstory within uplands can cause local extinctions of amphibians by altering terrestrial habitat or hindering movement. Studies of canopy above pond basins imply an opposite relationship; encroachment of overstory vegetation can be associated with local extinctions potentially via changes in light, thermal, and food resource environments. Unresolved uncertainties about the role of forest canopy reveal significant gaps in our understanding of wetland species distributions and dynamics. Any misunderstanding of canopy influences is simultaneously important to managers because current practices emphasize promoting or conserving vegetation growth particularly within buffers immediately adjacent to ponds. We evaluated this apparent contradiction by conducting a landscape-scale, long-term experiment using 14 natural vernal ponds. Tree felling at six manipulated ponds was limited in spatial scope but was nevertheless effective in increasing water temperature. Compared with eight control ponds, manipulated ponds maintained more amphibian species during five years post-manipulation. There was little evidence that any species was negatively influenced, and the reproductive effort of species for which we estimated egg inputs maintained pretreatment population densities in manipulated compared with control ponds. Overall, our experiment shows that a carefully circumscribed reduction of overhead forest canopy can enhance the capacity of vernal ponds to support wildlife diversity and suggests a scale dependence of canopy influences on amphibians. These findings have

  3. Canopy processes, fluxes and microclimate in a pine forest

    Energy Technology Data Exchange (ETDEWEB)

    Launiainen, S.

    2011-07-01

    Interaction between forests and the atmosphere occurs by radiative and turbulent transport. The fluxes of energy and mass between surface and the atmosphere directly influence the properties of the lower atmosphere and in longer time scales the global climate. Boreal forest ecosystems are central in the global climate system, and its responses to human activities, because they are significant sources and sinks of greenhouse gases and of aerosol particles. The aim of the present work was to improve our understanding on the existing interplay between biologically active canopy, microenvironment and turbulent flow and quantify. In specific, the aim was to quantify the contribution of different canopy layers to whole forest fluxes. For this purpose, long-term micrometeorological and ecological measurements made in a Scots pine (Pinus sylvestris) forest at SMEAR II research station in Southern Finland were used. The properties of turbulent flow are strongly modified by the interaction between the canopy elements: momentum is efficiently absorbed in the upper layers of the canopy, mean wind speed and turbulence intensities decrease rapidly towards the forest floor and power spectra is modulated by spectral short-cut . In the relative open forest, diabatic stability above the canopy explained much of the changes in velocity statistics within the canopy except in strongly stable stratification. Large eddies, ranging from tens to hundred meters in size, were responsible for the major fraction of turbulent transport between a forest and the atmosphere. Because of this, the eddy-covariance (EC) method proved to be successful for measuring energy and mass exchange inside a forest canopy with exception of strongly stable conditions. Vertical variations of within canopy microclimate, light attenuation in particular, affect strongly the assimilation and transpiration rates. According to model simulations, assimilation rate decreases with height more rapidly than stomatal

  4. USGS Small-scale Dataset - 100-Meter Resolution Tree Canopy of Hawaii 201301 GeoTIFF

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Hawaii, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  5. USGS Small-scale Dataset - 100-Meter Resolution Tree Canopy of Alaska 201301 GeoTIFF

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Alaska, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  6. Influence of canopy thickness on throughfall amount and kinetic energy under different canopy saturation conditions: an indoor experiment with a Japanese cypress (Chamaecyparis obtusa) stand

    Science.gov (United States)

    Nanko, K.; Onda, Y.; Ito, A.; Moriwaki, H.

    2007-12-01

    To assess the influence of canopy thickness on throughfall amount and kinetic energy under different canopy saturation conditions, indoor laboratory experiments were conducted involving water sprinklers and a transplanted tree stand of Japanese cypress (Chamaecyparis obtusa) of 9.8 m high. Artificial rainfall was applied onto the tree for 15 min with an intensity of 39.8 mm h-1. Throughfall amount and raindrops measured at eight points for four canopy structures generated by staged branch pruning, each first branch height was 2, 3, 4, and 5 m, respectively. With the thinning of the canopy thickness, 1) initial throughfall amount increased depending on the decrease of canopy storage, 2) the abundance ratio of large drops generated as the drips increased owing to the decrease of splash droplets generated by the impact of the drips onto the foliage in the lower canopy layers, 3) the drips with higher velocities generated from the upper canopy layers increased, and consequently, 4) throughfall kinetic energy increased. The canopy thickness has an important effect on the variability of throughfall amount and kinetic energy due to the change of processes of canopy saturation and the drip generation in the canopies.

  7. Improving canopy sensor algorithms with soil and weather information

    Science.gov (United States)

    Nitrogen (N) need to support corn (Zea mays L.) production can be highly variable within fields. Canopy reflectance sensing for assessing crop N health has been implemented on many farmers’ fields to side-dress or top-dress variable-rate N application, but at times farmers report the performance of ...

  8. Incorporating Plant Phenology Dynamics in a Biophysical Canopy Model

    Science.gov (United States)

    Barata, Raquel A.; Drewry, Darren

    2012-01-01

    The Multi-Layer Canopy Model (MLCan) is a vegetation model created to capture plant responses to environmental change. Themodel vertically resolves carbon uptake, water vapor and energy exchange at each canopy level by coupling photosynthesis, stomatal conductance and leaf energy balance. The model is forced by incoming shortwave and longwave radiation, as well as near-surface meteorological conditions. The original formulation of MLCan utilized canopy structural traits derived from observations. This project aims to incorporate a plant phenology scheme within MLCan allowing these structural traits to vary dynamically. In the plant phenology scheme implemented here, plant growth is dependent on environmental conditions such as air temperature and soil moisture. The scheme includes functionality that models plant germination, growth, and senescence. These growth stages dictate the variation in six different vegetative carbon pools: storage, leaves, stem, coarse roots, fine roots, and reproductive. The magnitudes of these carbon pools determine land surface parameters such as leaf area index, canopy height, rooting depth and root water uptake capacity. Coupling this phenology scheme with MLCan allows for a more flexible representation of the structure and function of vegetation as it responds to changing environmental conditions.

  9. Estimating foliar biochemistry from hyperspectral data in mixed forest canopy

    DEFF Research Database (Denmark)

    Huber Gharib, Silvia; Kneubühler, Mathias; Psomas, Achilleas

    2008-01-01

    data to estimate the foliar concentration of nitrogen, carbon and water in three mixed forest canopies in Switzerland. With multiple linear regression models, continuum-removed and normalized HyMap spectra were related to foliar biochemistry on an individual tree level. The six spectral wavebands used...

  10. Transient water stress in a vegetation canopy - Simulations and measurements

    Science.gov (United States)

    Carlson, Toby N.; Belles, James E.; Gillies, Robert R.

    1991-01-01

    Consideration is given to observational and modeling evidence of transient water stress, the effects of the transpiration plateau on the canopy radiometric temperature, and the factors responsible for the onset of the transpiration plateau, such as soil moisture. Attention is also given to the point at which the transient stress can be detected by remote measurement of surface temperature.

  11. Tree diversity and canopy cover in cocoa systems in Ghana

    DEFF Research Database (Denmark)

    Asare, Richard; Ræbild, Anders

    2016-01-01

    Cocoa (Theobroma cacao L.) growing systems in Ghana and West Africa consist of diverse tree species and densities.This study was conducted to determine factors that influence tree species configurations and how tree characteristics affect canopy cover in cocoa farms. Eighty-six farmers...

  12. A canopy observation platform in East Kalimantan, Indonesia

    NARCIS (Netherlands)

    Leighton, Mark; Thomas, Barry

    1980-01-01

    Tropical biologists are often frustrated in their attempts to study plants, animals, and climate in the forest canopy because of the difficulty of access to this region 20-50 meters high. This problem can be overcome by the use of free-standing towers (Pasoh, Malaya; Barro Colorado Island, Panama) o

  13. Using hyperspectral remote sensing data for retrieving canopy water content

    NARCIS (Netherlands)

    Clevers, J.G.P.W.; Kooistra, L.

    2009-01-01

    Canopy water content (CWC) is important for understanding functioning of terrestrial ecosystems. Spectral derivatives at the slopes of the 970 nm and 1200 nm water absorption features offer good potential as estimators for CWC. An extensively grazed fen meadow is used as test site in this study. Res

  14. Sources of sulphur in rain collected below a wheat canopy

    Energy Technology Data Exchange (ETDEWEB)

    Raybould, C.C.; Unsworth, M.H.; Gregory, P.J.

    1977-05-12

    The quantity of sulfur in rain collected below a maturing wheat canopy was measured. The measurement and calculations show that leaching of plant sulfur by rain was the main source of additional sulfur in throughfall and that most sulfur dry-deposited on leaf surfaces remained fixed there.

  15. Modelling kinetics of plant canopy architecture: concepts and applications

    NARCIS (Netherlands)

    Birch, C.J.; Andrieu, B.; Fournier, C.; Vos, J.; Room, P.

    2003-01-01

    Most crop models simulate the crop canopy as an homogeneous medium. This approach enables modelling of mass and energy transfer through relatively simple equations, and is useful for understanding crop production. However, schematisation of an homogeneous medium cannot address the heterogeneous natu

  16. A New Mechanism of Canopy Effect in Unsaturated Freezing Soils

    Directory of Open Access Journals (Sweden)

    Teng Jidong

    2016-01-01

    Full Text Available Canopy effect refers to the phenomenon where moisture accumulates underneath an impervious cover. Field observation reveals that canopy effect can take place in relatively dry soils where the groundwater table is deep and can lead to full saturation of the soil immediately underneath the impervious cover. On the other hand, numerical analysis based on existing theories of heat and mass transfer in unsaturated soils can only reproduce a minor amount of moisture accumulation due to an impervious cover, particularly when the groundwater table is relatively deep. In attempt to explain the observed canopy effect in field, this paper proposes a new mechanism of moisture accumulation in unsaturated freezing soils: vapour transfer in such a soil is accelerated by the process of vapour-ice desublimation. A new approach for modelling moisture and heat movements is proposed, in which the phase change of evaporation, condensation and de-sublimation of vapor flow are taken into account. The computed results show that the proposed model can indeed reproduce the unusual moisture accumulation observed in relatively dry soils. The results also demonstrate that soil freezing fed by vapour transfer can result in a water content close to full saturation. Since vapour transfer is seldom considered in geotechnical design, the canopy effect deserves more attention during construction and earth works in cold and arid regions.

  17. Estimation of in-canopy ammonia sources and sinks in a fertilized Zea mays field

    Science.gov (United States)

    An analytical model was developed that describes the in-canopy vertical distribution of NH3 source and sinks and vertical fluxes in a fertilized agricultural setting using measured in-canopy concentration and wind speed profiles. This model was applied to quantify in-canopy air-s...

  18. SPATIAL CONTAGIOUSNESS OF CANOPY DISTURBANCE IN TROPICAL RAIN FOREST : AN INDIVIDUAL-TREE-BASED TEST

    NARCIS (Netherlands)

    Jansen, Patrick A.; Van Der Meer, Peter J.; Bongers, Frans

    2008-01-01

    Spatial contagiousness of canopy dynamics-the tendency of canopy disturbances to occur nearby existing canopy openings due to an elevated risk of tree fall around gaps-has been demonstrated in many temperate-zone forests, but only inferentially for tropical forests. Hypothesized mechanisms increasin

  19. Simulation of Canopy Leaf Inclination Angle in Rice

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiao-cui; LU Chuan-gen; HU Ning; YAO Ke-min; ZHANG Qi-jun; DAI Qi-gen

    2013-01-01

    A leaf inclination angle distribution model, which is applicable to simulate leaf inclination angle distribution in six heights of layered canopy at different growth stages, was established by component factors affecting plant type in rice. The accuracy of the simulation results was validated by measured values from a field experiment. The coefficient of determination (R2) and the root mean square error (RMSE) between the simulated and measured values were 0.9472 and 3.93%, respectively. The simulation results showed that the distribution of leaf inclination angles differed among the three plant types. The leaf inclination angles were larger in the compact variety Liangyoupeijiu with erect leaves than in the loose variety Shanyou 63 with droopy leaves and the intermediate variety Liangyou Y06. The leaf inclination angles were distributed in the lower range in Shanyou 63, which matched up with field measurements. The distribution of leaf inclination angles in the same variety changed throughout the seven growth stages. The leaf inclination angles enlarged gradually from transplanting to booting. During the post-booting period, the leaf inclination angle increased in Shanyou 63 and Liangyou Y06, but changed little in Liangyoupeijiu. At every growth stage of each variety, canopy leaf inclination angle distribution on the six heights of canopy layers was variable. As canopy height increased, the layered leaf area index (LAI) decreased in all the three plant types. However, while the leaf inclination angles showed little change in Liangyoupeijiu, they became larger in Shanyou 63 but smaller in Liangyou Y06. The simulation results used in the constructed model were very similar to the actual measurement values. The model provides a method for estimating canopy leaf inclination angle distribution in rice production.

  20. Radon 222 tracing of soil and forest canopy trace gas exchange in an open canopy boreal forest

    Science.gov (United States)

    Ussler, William, III; Chanton, Jeffrey P.; Kelley, Cheryl A.; Martens, Christopher S.

    1994-01-01

    A set of continuous, high-resolution atmospheric radon (Rn-222) concentration time series and radon soil flux measurements were acquired during the summer of 1990 at a micrometeorological tower site 13 km northwest of Schefferville, Quebec, Canada. The tower was located in a dry upland, open-canopy lichen-spruce woodland. For the period July 23 to August 1, 1990, the mean radon soil flux was 41.1 +/- 4.8 Bq m(exp -2)/h. Radon surface flux from the two end-member forest floor cover types (lichen mat and bare soil) were 38.8 +/- 5.1 and 61.8 +/- 15.6 Bq m(exp -2)/h, respectively. Average total forest canopy resistances computed using a simple 'flux box' model for radon exchange between the forest canopy and the overlying atmosphere range from 0.47 +/- 0.24 s cm(exp -1) to 2.65 +/- 1.61 cm(exp -1) for daytime hours (0900-1700 LT) and from 3.44 +/- 0.91 s cm(exp -1) to 10.55 +/- 7.16 s cm(exp -1) for nighttime hours (2000-0600) for the period July 23 to August 6, 1990. Continuous radon profiling of canopy atmospheres is a suitable approach for determining rates of biosphere/atmosphere trace gas exchange for remote field sites where daily equipment maintenance is not possible. where daily equipment maintenance is not possible.

  1. Evapotranspiration from sub-canopy vegetation in an old coniferous plantation of Chamaecyparis obtusa in Japan

    Science.gov (United States)

    Takagi, Masahiro; Tateishi, Makiko

    2015-04-01

    Evapotranspiration is a substantial component of forest hydrologic budgets. In coniferous plantations (i.e. man-made forests for timber production), sub-canopy vegetation that is naturally regenerated and consists of lower height trees is thought to contribute to the entire evapotranspiration of forests. The objective of this study is to quantify the interception loss and transpiration from both sub-canopy vegetation and top-canopy layer of the Japanese cypress Chamaecyparis obtusa. The study was conducted in a 90-year-old cypress plantation in southwestern Japan for 12 months from March 2003. Tree density and height of the top-canopy cypress and sub-canopy broad-leaved trees were 770 trees/ha and 22 m, and 6300 trees/ha and approximately 9 m, respectively. The interception loss was estimated from throughfall and stemflow measurements. Transpiration was measured as the rate of xylem sapflow using thermal dissipation probes. The throughfall collectors were set on the ground and at the top of a climbing frame at a height of 9 m, in order to divide the interception loss into top- and sub-canopy layers. Stemflow was measured with eight trees of the top-canopy cypress and seven trees of the sub-canopy trees. The probes for sapflow measurement were inserted in 13 top-canopy cypress and 12 sub-canopy trees. Annual rainfall was 3089 mm, which is the average rainfall of the last 10 years. Total interception loss, that of top-canopy cypress, and that of sub-canopy vegetation were 930, 595, and 335 mm, respectively. Ratio of these variables to the rainfall were 0.30, 0.19, and 0.11, respectively. Approximately one-third of the total interception loss was due to the sub-canopy vegetation. The sub-canopy vegetation increased the interception loss of the cypress plantation by approximately 60%. Total transpiration, that of top-canopy cypress, and that of sub-canopy vegetation were 443, 296, and 147 mm, respectively. Ratio of these variables to the rainfall were 0.144, 0.096, and

  2. Strengthening the Ubuntu social canopy after the Afrophobic attacks

    Directory of Open Access Journals (Sweden)

    Zorodzai Dube

    2016-03-01

    Full Text Available In view of the aftermath of the Afrophobic attacks in South Africa, this study regards Paul�s emphasis concerning common humanity and morality as a possible lacuna towards strengthening Ubuntu. Paul taught that both the Jews and the Gentiles have their common ancestor � Adam, and that good morality is a better identity marker than ethnicity. In view of the aftermath of the Afrophobic attacks in South Africa, this study suggests that similar arguments can be used to amend the Ubuntu social canopy.Intradisciplinary and/or interdisciplinary implications: This study is interdisciplinary in nature in that it uses perspectives from social sciences to seek solutions towards a more inclusive communityKeywords: Afrophobia; Xenophobia; Ubuntu; Social Canopy; Christ-like Anthropology

  3. Canopy Measurements with a Small Unmanned Aerial System

    Science.gov (United States)

    Peschel, J.

    2015-12-01

    This work discusses the use of a small unmanned aerial system (UAS) for the remote placement of wireless environmental sensors in tree canopies. Remote presence applications occur when one or more humans use a robot to project themselves into an environment in order to complete an inaccessible or time-critical mission. The more difficult problem of physical object manipulation goes one step further by incorporating physical-based interaction, in additional to visualization. Forested environments present especially unique challenges for small UAS versus similar domains (e.g., disaster response, inspection of critical infrastructure) due to the navigation and interaction required with dense tree canopies. This work describes two field investigations that inform: i) the type of physical object manipulation and visualization necessary for sensor placement (ventral, frontal, dorsal), ii) the necessary display form (hybrid) for piloting and sensor placement, and iii) visual feedback mechanisms useful for handling human-robot team role conflicts.

  4. [Active crop canopy sensor-based nitrogen diagnosis for potato].

    Science.gov (United States)

    Yu, Jing; Li, Fei; Qin, Yong-Lin; Fan, Ming-Shou

    2013-11-01

    In the present study, two potato experiments involving different N rates in 2011 were conducted in Wuchuan County and Linxi County, Inner Mongolia. Normalized difference vegetation index (NDVI) was collected by an active GreenSeeker crop canopy sensor to estimate N status of potato. The results show that the NDVI readings were poorly correlated with N nutrient indicators of potato at vegetative Growth stage due to the influence of soil background. With the advance of growth stages, NDVI values were exponentially related to plant N uptake (R2 = 0.665) before tuber bulking stage and were linearly related to plant N concentration (R2 = 0.699) when plant fully covered soil. In conclusion, GreenSeeker active crop sensor is a promising tool to estimate N status for potato plants. The findings from this study may be useful for developing N recommendation method based on active crop canopy sensor.

  5. Effects of Multiple Photon Scattering in Deciduous Tree Canopies

    Science.gov (United States)

    2009-12-01

    AFRL-RY-WP-TR-2010-1024 EFFECTS OF MULTIPLE PHOTON SCATTERING IN DECIDUOUS TREE CANOPIES Michael Greiner, Bradley D. Duncan, and Matthew P...REPORT TYPE 3. DATES COVERED (From - To) December 2009 Interim 21 October 2007 – 20 December 2009 4. TITLE AND SUBTITLE EFFECTS OF MULTIPLE PHOTON...to channel 1 of an oscilloscope using a cable of arbitrary length and a T-connector. We then connected one end of the 500ft trigger cable to the T

  6. Extracting hidden trails and roads under canopy using LIDAR

    OpenAIRE

    Krougios, Prokopios

    2008-01-01

    The field of Remote Sensing has been greatly benefited by the development of LIDAR. The extraction of bare earth under tree canopies and especially the identification of hidden trails are important tools for military and civilian operations in dense forests. LIDAR data from Sequoia National Park in California (2008) and Fort Belvoir Military Base in Virginia (2007) were two areas that were selected for analysis. Quick Terrain Modeler software was used in order to recognize hidden trails....

  7. Computing energy budget within a crop canopy from Penmann's formulae

    Indian Academy of Sciences (India)

    Mahendra Mohan; K K Srivastava

    2001-06-01

    The Lhomme's model (1988a), that extended Penmann's formulae to a multi-layer model, is rede-fined as a function of micrometeorological and physiological profiles of crop canopy. The sources and sinks of sensible and latent heat uxes are assumed to lie on a fictitious plane called zero-displacement plane. Algorithms are given to compute sensible and latent heat ux densities. Per-formance of the algorithms is compared with that of earlier algorithms.

  8. Assessing aboveground tropical forest biomass using Google Earth canopy images.

    Science.gov (United States)

    Ploton, Pierre; Pélissier, Raphaël; Proisy, Christophe; Flavenot, Théo; Barbier, Nicolas; Rai, S N; Couteron, Pierre

    2012-04-01

    Reducing Emissions from Deforestation and Forest Degradation (REDD) in efforts to combat climate change requires participating countries to periodically assess their forest resources on a national scale. Such a process is particularly challenging in the tropics because of technical difficulties related to large aboveground forest biomass stocks, restricted availability of affordable, appropriate remote-sensing images, and a lack of accurate forest inventory data. In this paper, we apply the Fourier-based FOTO method of canopy texture analysis to Google Earth's very-high-resolution images of the wet evergreen forests in the Western Ghats of India in order to (1) assess the predictive power of the method on aboveground biomass of tropical forests, (2) test the merits of free Google Earth images relative to their native commercial IKONOS counterparts and (3) highlight further research needs for affordable, accurate regional aboveground biomass estimations. We used the FOTO method to ordinate Fourier spectra of 1436 square canopy images (125 x 125 m) with respect to a canopy grain texture gradient (i.e., a combination of size distribution and spatial pattern of tree crowns), benchmarked against virtual canopy scenes simulated from a set of known forest structure parameters and a 3-D light interception model. We then used 15 1-ha ground plots to demonstrate that both texture gradients provided by Google Earth and IKONOS images strongly correlated with field-observed stand structure parameters such as the density of large trees, total basal area, and aboveground biomass estimated from a regional allometric model. Our results highlight the great potential of the FOTO method applied to Google Earth data for biomass retrieval because the texture-biomass relationship is only subject to 15% relative error, on average, and does not show obvious saturation trends at large biomass values. We also provide the first reliable map of tropical forest aboveground biomass predicted

  9. Study of momentum transfers within a vegetation canopy

    Indian Academy of Sciences (India)

    Mahendra Mohan; M K Tiwari

    2004-03-01

    Two models have been developed by applying conditions of continuity between the roughness sub- layer and the top of vegetation canopy having constant foliage distribution. Massman's cosh-type of wind profile and Albini's exponential wind profile have been used to derive expressions for shear stress, displacement height and roughness length in analytical forms. The computed results compared with those of Massman models (1987, 1997) show similarity with the present models.

  10. Effect of canopy manipulation on growth and yield of mangosteen

    Directory of Open Access Journals (Sweden)

    Sdoodee, S.

    2007-05-01

    Full Text Available A pruning trial was established to investigate the effect of canopy manipulation on growth and yield of mangosteen under field conditions at The-Pha research station, Songkhla province. Forty 7-year-oldmangosteen trees were used and the study designed as randomized complete blocks with 4 treatments in 10 replicates. The treatments were as follows: 1. control or no-pruning (T1, 2. cutting upper one along one sideof each tier of branches along the main stem (T2, 3. cutting one tier of branches with the upper tier along the main stem remaining (T3 and 4. top-cutting at 3-meter plant height (T4. It was found that 1 year afterpruning, the trees in T2 exhibited highest relative plant height and longest branch length after pruning (6.63m /4 month and 35.31 cm /4 month, respectively. First-year bearing was found only in T1 and T4, and the fruit yields in T1 and T4 were (3.13 and 2.31 kg/tree, respectively. It was remarkable that light transmissionthrough plant canopy in T4 gave the highest photosynthetically active radiation PAR (48.55%, but T1 the lowest PAR (2.46%. Thus, the plant growth in T4 was greater than in T1, and the mangosteen trees in T4also exhibited high root proliferation. From the result, it is suggested that canopy manipulation of T4 is anappropriate method.

  11. The Evolution of Dark Canopies Around Active Regions

    CERN Document Server

    Wang, Y -M; Muglach, K

    2011-01-01

    As observed in spectral lines originating from the chromosphere, transition region, and low corona, active regions are surrounded by an extensive "circumfacular" area which is darker than the quiet Sun. We examine the properties of these dark moat- or canopy-like areas using \\ion{Fe}{9} 17.1 nm images and line-of-sight magnetograms from the {\\it Solar Dynamics Observatory}. The 17.1 nm canopies consist of fibrils (horizontal fields containing EUV-absorbing chromospheric material) clumped into featherlike structures. The dark fibrils initially form a quasiradial or vortical pattern as the low-lying field lines fanning out from the emerging active region connect to surrounding network and intranetwork elements of the opposite polarity. The area occupied by the 17.1 nm fibrils expands as supergranular convection causes the active region flux to spread into the background medium; the outer boundary of the dark canopy stabilizes where the diffusing flux encounters a unipolar region of the opposite sign. The dark f...

  12. Ripe Fuji Apple Detection Model Analysis in Natural Tree Canopy

    Directory of Open Access Journals (Sweden)

    Dongjian He

    2012-11-01

    Full Text Available In this work we develop a novel approach for the automatic recognition of red Fuji apples within a tree canopy using three distinguishable color models in order to achieve automated harvesting. How to select the recognition model is important for the certain intelligent harvester employed to perform in real orchards. The L*a*b color model, HSI (Hue, Saturation and Intensity color model and LCD color difference model, which are insensitive to light conditions, are analyzed and applied to detect the fruit under the different lighting conditions because the fruit has the highest red color among the objects in the image. The fuzzy 2-partition entropy, which could discriminate the object and the background in grayscale images and is obtained from the histogram, is applied to the segment the Fuji apples under complex backgrounds. A series of mathematical morphological operations are used to eliminate segmental fragments after segmentation. Finally, the proposed approach is validated on apple images taken in natural tree canopies. A contribution reported in this work, is the voting scheme added to the natural tree canopy which recognizes apples under different light influences.

  13. Canopy leaching of subtropical mixed forests under acid rain

    Institute of Scientific and Technical Information of China (English)

    Renjun XIANG; Liyuan CHAI; Xilin ZHANG; Gong ZHANG; Guifang ZHAO

    2008-01-01

    Leaching of major ions from acid precipitation in a subtropical forest was examined based on an experi-ment in four sample sites in Shaoshan City, Hunan Province, China, from January 2001 to June 2002. Results clearly show that when rain passed through the canopy, pH increased and the evidence of ion uptake was presented for SO42- , NO3-, Mg2+ and NH4+ ions, espe-cially of NH4+ and NO3-. The percentages of dissolved SO42-, Ca2+ and Mg2+ show a decreasing trend with increasing rainfall. Percentages of leaching Ca2+, K+ and Cl- ions show an increasing trend as a function of increased pH values. The forest canopy in Shaoshan City has a strong effect on the uptake of SO42- and NO3- ions under acid rain conditions. The decreasing order of ions leaching in the forest canopy is as follows: K+> Ca2+ > Cl- > Mg2+ > SO42- > NO3- > NH4+ > Na+.

  14. Assessing the cumulative impact of disturbance on canopy structure and chemistry in Appalachian forests

    Science.gov (United States)

    Deel, Lindsay N.

    Eastern forests experience a range of disturbance events over time, from stand-replacing disturbances, such as clear cuts, to ephemeral disturbances, such as insect outbreaks. By understanding the cumulative impact of disturbances on canopy structure and chemistry, we can gain insight into management strategies, assess a variety of ecosystem services, and even contribute to a larger body of knowledge on global climate change. I transformed a series of Landsat images spanning approximately 25 years into cumulative disturbance maps covering Green Ridge State Forest and Savage River State Forest in western Maryland. Intensive field surveys collected during the summer of 2009 provided measurements of canopy N and estimates of canopy cover, understory cover, and leaf cover. I used AVIRIS imagery flown concurrently with field data collection to map canopy nitrogen across both forests. Through this project, I tested the impact of cumulative disturbance on forest canopy cover and canopy nitrogen. I found that increased values of cumulative disturbance had a measurable negative impact on forest canopy structure and canopy nitrogen. Moreover, by testing varying methods of summing cumulative disturbance, I found that past disturbances diminish over time in importance, yet still influence the current canopy structure and canopy N of a forest. Thus, my study suggests that Landsat time series data can be synthesized into cumulative metrics incorporating multiple disturbance types, which help explain important disturbance-mediated changes in ecosystem functions.

  15. Variation in canopy duration in the perennial biofuel crop Miscanthus reveals complex associations with yield.

    Science.gov (United States)

    Robson, Paul R H; Farrar, Kerrie; Gay, Alan P; Jensen, Elaine F; Clifton-Brown, John C; Donnison, Iain S

    2013-05-01

    Energy crops can provide a sustainable source of power and fuels, and mitigate the negative effects of CO2 emissions associated with fossil fuel use. Miscanthus is a perennial C4 energy crop capable of producing large biomass yields whilst requiring low levels of input. Miscanthus is largely unimproved and therefore there could be significant opportunities to increase yield. Further increases in yield will improve the economics, energy balance, and carbon mitigation of the crop, as well as reducing land-take. One strategy to increase yield in Miscanthus is to maximize the light captured through an extension of canopy duration. In this study, canopy duration was compared among a diverse collection of 244 Miscanthus genotypes. Canopy duration was determined by calculating the number of days between canopy establishment and senescence. Yield was positively correlated with canopy duration. Earlier establishment and later senescence were also both separately correlated with higher yield. However, although genotypes with short canopy durations were low yielding, not all genotypes with long canopy durations were high yielding. Differences of yield between genotypes with long canopy durations were associated with variation in stem and leaf traits. Different methodologies to assess canopy duration traits were investigated, including visual assessment, image analysis, light interception, and different trait thresholds. The highest correlation coefficients were associated with later assessments of traits and the use of quantum sensors for canopy establishment. A model for trait optimization to enable yield improvement in Miscanthus and other bioenergy crops is discussed.

  16. Relationships Between the Distribution of Relative Canopy Light Intensity and the Peach Yield and Quality

    Institute of Scientific and Technical Information of China (English)

    HE Feng-li; WANG Fei; WEI Qin-ping; WANG Xiao-wei; ZHANG Qiang

    2008-01-01

    The aim of the present experiment was to study the relationship between the distribution of relative light intensity in canopy and yield and quality of Wanmi peach.The optimum relative canopy light intensity was judged to be 36.3% for high quality peaches,when canopy volumes of Wanmi peach trees with a relative light intensity<30%accounted for 7.7 and 47.9%of the total canopy volume in June and September,respectively.The canopy volume with a relative light intensity>80%was 27.7 and 3.1%of the total canopy volume in June and September.respectively.Peach canopies were divided into 0.5m×0.5m×0.5m cubes.with the relative light intensity being measured at different positions of the canopy during the growing season.Yield and fruit quality were also measured at these positions at harvest.The results showed that the relative light intensity decreased gradually from outside to inside and from top to bottom of the tree canopy.Fruit were mainly distributed in the upper and middle portions of the canopy,1.5-3.0m above ground. Regression results showed that single fruit weight and soluble solid content were positively related to relative light intensity.

  17. Relationships between MODIS black-sky shortwave albedo and airborne lidar based forest canopy structure

    Science.gov (United States)

    Korhonen, Lauri; Rautiainen, Miina; Arumäe, Tauri; Lang, Mait; Flewelling, James; Tokola, Timo; Stenberg, Pauline

    2016-04-01

    Albedo is one of the essential climate variables affecting the Earth's radiation balance. It is however not well understood how changes in forest canopy structure influence the albedo. Canopy structure can be mapped consistently for fairly large areas using airborne lidar sensors. Our objective was to study the relationships between MODIS shortwave black sky albedo product and lidar-based estimates of canopy structure in different biomes ranging from arctic to tropical. Our study is based on six structurally different forest sites located in Finland, Estonia, USA and Laos. Lidar-based mean height of the canopy, canopy cover and their transformations were used as predictor variables to describe the canopy structure. Tree species composition was also included for the three sites where it was available. We noticed that the variables predicting albedo best were different in open and closed canopy forests. In closed canopy forests, the species information was more important than canopy structure variables (R2=0.31-0.32) and using only structural variables resulted in poor R2 (0.13-0.15). If the 500 m MODIS pixel contained a mixture of forests and other land cover types, the albedo was strongly related to the forest area percent. In open canopy forests, structural variables such as canopy cover or height explained albedo well, but species information still improved the models (R2=0.27-0.52). We obtained the highest R2=0.52 using only structural variables in Laos on a partially degraded tropical forest with large variation in canopy cover. The different canopy structure variables were often correlated and the one that provided the best model changed from site to site.

  18. Turbulence spectral structures and dissipation rates above and within the forest canopy

    Institute of Scientific and Technical Information of China (English)

    刘树华; 刘和平; 朱廷曜; 金昌杰; 洪钟祥; 李军; 刘辉志

    1999-01-01

    Three-dimensional velocity components and temperature were measured using the new three-dimensional sonic anemometers/thermometers at two levels, above and within the forest canopy, in the Changbai Mountains of Northeast China. Turbulence spectral structure, local isotropy property and dissipation rates above and within the forest canopy were calculated using the eddy correlation method. Results show that the normalized turbulent spectral curves have-2/3 slopes in the inertial subrange. While the shapes of the spectra are in good agreement with the Kansas flat terrain results, the atmospheric turbulence is anisotropic above the forest canopy. Within the forest canopy, the turbulence is approximately isotropic. Compared with measurements from previous studies over flat terrain, the velocity and temperature spectra rates above and inside the forest canopy appear to shift toward higher frequencies. The turbulent kinetic energy and heat energy dissipation rates above and inside the forest canopy are much la

  19. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest.

    Energy Technology Data Exchange (ETDEWEB)

    Horn, Scott; Hanula, James L.; Ulyshen, Michael D.; Kilgo, John C.

    2005-01-01

    Horn, Scott, James L. Hanula, Michael D. Ulyshen, and John C. Kilgo. 2005. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest. Am. Midl. Nat. 153:321-326. Abstract: We found more green tree frogs (Hyla cinerea) in canopy gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopy gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat. Flies were the most commonly collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

  20. Differences in BVOC oxidation and SOA formation above and below the forest canopy

    Science.gov (United States)

    Schulze, Benjamin C.; Wallace, Henry W.; Flynn, James H.; Lefer, Barry L.; Erickson, Matt H.; Jobson, B. Tom; Dusanter, Sebastien; Griffith, Stephen M.; Hansen, Robert F.; Stevens, Philip S.; VanReken, Timothy; Griffin, Robert J.

    2017-02-01

    Gas-phase biogenic volatile organic compounds (BVOCs) are oxidized in the troposphere to produce secondary pollutants such as ozone (O3), organic nitrates (RONO2), and secondary organic aerosol (SOA). Two coupled zero-dimensional models have been used to investigate differences in oxidation and SOA production from isoprene and α-pinene, especially with respect to the nitrate radical (NO3), above and below a forest canopy in rural Michigan. In both modeled environments (above and below the canopy), NO3 mixing ratios are relatively small (urban forest environment increases the average contribution of NO3 to daytime below-canopy α-pinene oxidation to 32 %. Gas-phase RONO2 produced through NO3 oxidation undergoes net transport upward from the below-canopy environment during the day, and this transport contributes up to 30 % of total NO3-derived RONO2 production above the canopy in the morning (˜ 07:00). Modeled SOA mass loadings above and below the canopy ultimately differ by less than 0.5 µg m-3, and extremely low-volatility organic compounds dominate SOA composition. Lower temperatures below the canopy cause increased partitioning of semi-volatile gas-phase products to the particle phase and up to 35 % larger SOA mass loadings of these products relative to above the canopy in the model. Including transport between above- and below-canopy environments increases above-canopy NO3-derived α-pinene RONO2 SOA mass by as much as 45 %, suggesting that below-canopy chemical processes substantially influence above-canopy SOA mass loadings, especially with regard to monoterpene-derived RONO2.

  1. LEAF MICROMORPHOMETRY OF Schinus molle L. (ANARCADIACEAE) IN DIFFERENT CANOPY HEIGHTS.

    OpenAIRE

    Marinês Ferreira Pires; Márcio Paulo Pereira; Evaristo Mauro de Castro; Sandro Barbosa; Fabricio José Pereira

    2015-01-01

    Leaf characterization of trees is essential for its identification and use, as well as to understand its relationships with environment. The objective of this work is to study the leaflet anatomy and leaf biometrical characteristics at different canopy heights of Schinus molle plants as a function of its environmental and physiological modifications. Leaves were collected at three different canopy heights: base, middle and upper canopy in a plantation of S. molle. Leaves were u...

  2. Asplenium bird’s nest ferns in rainforest canopies are climate-contingent refuges for frogs

    OpenAIRE

    Brett R Scheffers; Ben L. Phillips; Shoo, Luke P

    2014-01-01

    Epiphytes are important for canopy dwelling organisms because they provide a cool and moist microhabitat in the relatively hot and dry canopy. Here we examine whether epiphytic Asplenium ferns act as important habitats for arboreal frogs. We conducted extensive fern and habitat surveys for frogs in the Philippines, and complimented these surveys with roaming day and night canopy surveys to identify the full extent of habitat use across the vertical strata. We artificially dried ferns of vario...

  3. Canopy and leaf gas exchange of Haloxylon ammodendron under different soil moisture regimes

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    In order to reveal the drought resistance and adaptation of the C4 desert plant Haloxylon ammodendron under artificially controlled soil moisture regimes,representative plants were selected to measure canopy photosynthesis using canopy photosynthetic measurement system.The results showed that appropriate soil moisture significantly enhances the canopy and leaf photosynthetic capacity,and extremely high soil moisture is not conducive to the photosynthesis of H.ammodendron.

  4. Momentum and particle transport in a nonhomogenous canopy

    Science.gov (United States)

    Gould, Andrew W.

    Turbulent particle transport through the air plays an important role in the life cycle of many plant pathogens. In this study, data from a field experiment was analyzed to explore momentum and particle transport within a grape vineyard. The overall goal of these experiments was to understand how the architecture of a sparse agricultural canopy interacts with turbulent flow and ultimately determines the dispersion of airborne fungal plant pathogens. Turbulence in the vineyard canopy was measured using an array of four sonic anemometers deployed at heights z/H 0.4, 0.9, 1.45, and 1.95 where z is the height of the each sonic and H is the canopy height. In addition to turbulence measurements from the sonic anemometers, particle dispersion was measured using inert particles with the approximate size and density of powdery mildew spores and a roto-rod impaction trap array. Measurements from the sonic anemometers demonstrate that first and second order statistics of the wind field are dependent on wind direction orientation with respect to vineyard row direction. This dependence is a result of wind channeling which transfers energy between the velocity components when the wind direction is not aligned with the rows. Although the winds have a strong directional dependence, spectra analysis indicates that the structure of the turbulent flow is not fundamentally altered by the interaction between wind direction and row direction. Examination of a limited number of particle release events indicates that the wind turning and channeling observed in the momentum field impacts particle dispersion. For row-aligned flow, particle dispersion in the direction normal to the flow is decreased relative to the plume spread predicted by a standard Gaussian plume model. For flow that is not aligned with the row direction, the plume is found to rotate in the same manner as the momentum field.

  5. Characteristics of canopy and light transmittance in three types of apple orchards in Weibei areas of Shaanxi Province,China

    Institute of Scientific and Technical Information of China (English)

    Dengtao GAO; Mingyu HAN; Bingzhi LI; Linsen ZHANG; Ru BAI

    2008-01-01

    The effect of different modified tree shapes (MTS) on light reception was compared among three types of apple orchards: small-sized canopy, middle-sized canopy and large-sized canopy in Weibei areas of Shaanxi Province, China, by using WinsCanopy2004a (2002) for Hemispherical Image Analysis. The results showed that higher average values of photosynthetic photon flux density (PPFD) under canopy per day appeared in all tested orchards, and the number of branches per 667 m2 was lower, indicating that the modified tree shapes were effective to improve the light conditions of canopy but the pruning amount seemed to be slightly more than the appropriate level in Weibei areas. The middle-sized canopy had the maximal light penetration and the small-sized canopy had the least and the leaf area index (LAI) and the ratio of one year-old shoots to scaffold limbs were maximal in large-sized canopy orchards.

  6. Temporal Scales of the Nocturnal Flow Within and Above a Forest Canopy in Amazonia

    Science.gov (United States)

    Santos, Daniel M.; Acevedo, Otávio C.; Chamecki, Marcelo; Fuentes, José D.; Gerken, Tobias; Stoy, Paul C.

    2016-10-01

    Multiresolution decomposition is applied to 10 months of nocturnal turbulence observations taken at eight levels within and above a forest canopy in Central Amazonia. The aim is to identify the contributions of different temporal scales of the flow above and within the canopy. Results show that turbulence intensity in the lower canopy is mostly affected by the static stability in the upper canopy. Horizontal velocity fluctuations peak at time scales longer than 100 s within the canopy, which correspond to the scale of non-turbulent submeso motions above the canopy. In the vertical velocity spectrum near the surface, the peak occurs at time scales around 100 s, which are larger than the time scales of the turbulent flow above the canopy. Heat-flux cospectra within the canopy peak at the same temporal scales as the vertical velocity fluctuations at that level, suggesting the existence of buoyancy driven turbulence. Case studies are presented as evidence that low-frequency fluctuations propagate towards the canopy interior more easily than does turbulence.

  7. Vertical stratification of beetles (Coleoptera) and flies (Diptera) in temperate forest canopies.

    Science.gov (United States)

    Maguire, Dorothy Y; Robert, Katleen; Brochu, Kristen; Larrivée, Maxim; Buddle, Christopher M; Wheeler, Terry A

    2014-02-01

    Forest canopies support high arthropod biodiversity, but in temperate canopies, little is known about the spatial distribution of these arthropods. This is an important first step toward understanding ecological roles of insects in temperate canopies. The objective of this study was to assess differences in the species composition of two dominant and diverse taxa (Diptera and Coleoptera) along a vertical gradient in temperate deciduous forest canopies. Five sugar maple trees from each of three deciduous forest sites in southern Quebec were sampled using a combination of window and trunk traps placed in three vertical strata (understory, mid-canopy, and upper-canopy) for three sampling periods throughout the summer. Coleoptera species richness and abundance did not differ between canopy heights, but more specimens and species of Diptera were collected in the upper-canopy. Community composition of Coleoptera and Diptera varied significantly by trap height. Window traps collected more specimens and species of Coleoptera than trunk traps, although both trap types should be used to maximize representation of the entire Coleoptera community. There were no differences in abundance, diversity, or composition of Diptera collected between trap types. Our data confirm the relevance of sampling all strata in a forest when studying canopy arthropod biodiversity.

  8. [Effects of free-air CO2 enrichment on rice canopy microlimate].

    Science.gov (United States)

    Luo, Weihong; Mayumi, Yoshimoto; Dai, Jianfeng; Zhu, Jianguo; Han, Yong; Liu, Gan

    2002-10-01

    In this study, the free-air CO2 enrichment (FACE) system (setup at at Anzhen, Wuxi, Jiangsu Province in 2001) was used to investigate the effects of FACE on rice canopy microclimate. The rice canopy microclimate observations were carried out from August 26 to October 13, 2001, when the rice crops were at the heading to maturing development stage. The results showed that FACE reduced the rice leaf stomatal conductance. The rice leaf stomatal conductance difference between FACE and ambient was larger among upper layer leaves than among lower layer leaves and at heading and milk filling stages than at maturing stage. FACE increased daytime rice canopy temperature but had little effect on nighttime rice canopy temperature. The daytime rice canopy temperature difference between FACE and ambient was larger at heading and milk filling stages than at maturing stage. From heading to flowering, the daily maximum rice canopy temperature difference between FACE and ambient reached 1.2 degrees C under fine weather condition. The average daytime rice canopy temperature from flowering to maturing stage was about 0.43 degree C. Daytime air temperature inside rice canopy was also affected by FACE. Daytime air temperature inside rice canopy was higher in FACE plot than in ambient plot. The value of daytime air temperature difference between FACE and ambient increased with the increase of solar radiation and varied with height. The maximum daytime air temperature difference between FACE and ambient varied between 0.47-1.2 degrees C and 0.37-0.8 degree C at middle of canopy and canopy height, respectively. Air humidity and nighttime air temperature inside rice canopy were not significantly affected by FACE. These results indicate that FACE reducing rice leaf stomatal conductance was the major cause of the increase of canopy temperature and inside canopy air temperature in FACE plot. The higher canopy temperature and inside canopy air temperature in FACE plot resulted in the earlier

  9. Seeing the Snow through the Trees: Towards a Validated Canopy Adjustment for Fractional Snow Covered Area

    Science.gov (United States)

    Coons, L.; Nolin, A. W.; Painter, T.

    2012-12-01

    Satellite remote sensing is an important tool for monitoring the spatial distribution of snow cover, which acts as a vital reservoir of water for human and ecosystem needs. Current methods exist mapping the fraction of snow in each image pixel from NASA's Moderate Resolution Imaging Spectroradiometer (MODIS) and Landsat Thematic Mapper (TM). Although these methods can effectively detect this fractional snow-covered area (fSCA) in open areas, snow cover is underestimated in forested areas where canopy cover obscures the snow. Accounting for obscured snow cover will significantly improve estimates of fSCA for hydrologic forecasting and monitoring. This study will address how individual trees and the overall forest canopy affect snow distributions on the ground with the goal of determining metrics that can parameterize the spatial patterns of sub-canopy snow cover. Snow cover measurements were made during winter 2011-2012 at multiple sites representing a range of canopy densities. In the snow-free season, we used terrestrial laser scanning (TLS) and manual field methods to fully characterize the forest canopy height, canopy gap fraction, crown width, tree diameter at breast height (DBH), and stand density. We also use multi-angle satellite imagery from MISR and airborne photos to map canopy characteristics over larger areas. Certain canopy structure characteristics can be represented with remote sensing data. These data serve as a key first step in developing canopy adjustment factors for fSCA from MODIS, TM, and other snow mapping sensors.

  10. Modeling canopy CO2 exchange in the European Russian Arctic

    DEFF Research Database (Denmark)

    Kiepe, Isabell; Friborg, Thomas; Herbst, Mathias

    2013-01-01

    In this study, we use the coupled photosynthesis-stomatal conductance model of Collatz et al. (1991) to simulate the current canopy carbon dioxide exchange of a heterogeneous tundra ecosystem in European Russia. For the parameterization, we used data obtained from in situ leaf level measurements...... in combination with meteorological data from 2008. The modeled CO2 fluxes were compared with net ecosystem exchange (NEE), measured by the eddy covariance technique during the snow-free period in 2008. The findings from this study indicated that the main state parameters of the exchange processes were leaf area...

  11. Modeling radiative transfer in tropical rainforest canopies: sensitivity of simulated albedo to canopy architectural and optical parameters

    Directory of Open Access Journals (Sweden)

    Sílvia N. M. Yanagi

    2011-12-01

    Full Text Available This study evaluates the sensitivity of the surface albedo simulated by the Integrated Biosphere Simulator (IBIS to a set of Amazonian tropical rainforest canopy architectural and optical parameters. The parameters tested in this study are the orientation and reflectance of the leaves of upper and lower canopies in the visible (VIS and near-infrared (NIR spectral bands. The results are evaluated against albedo measurements taken above the K34 site at the INPA (Instituto Nacional de Pesquisas da Amazônia Cuieiras Biological Reserve. The sensitivity analysis indicates a strong response to the upper canopy leaves orientation (x up and to the reflectivity in the near-infrared spectral band (rNIR,up, a smaller sensitivity to the reflectivity in the visible spectral band (rVIS,up and no sensitivity at all to the lower canopy parameters, which is consistent with the canopy structure. The combination of parameters that minimized the Root Mean Square Error and mean relative error are Xup = 0.86, rVIS,up = 0.062 and rNIR,up = 0.275. The parameterizations performed resulted in successful simulations of tropical rainforest albedo by IBIS, indicating its potential to simulate the canopy radiative transfer for narrow spectral bands and permitting close comparison with remote sensing products.Este estudo avalia a sensibilidade do albedo da superfície pelo Simulador Integrado da Biosfera (IBIS a um conjunto de parâmetros que representam algumas propriedades arquitetônicas e óticas do dossel da floresta tropical Amazônica. Os parâmetros testados neste estudo são a orientação e refletância das folhas do dossel superior e inferior nas bandas espectrais do visível (VIS e infravermelho próximo (NIR. Os resultados são avaliados contra observações feitas no sítio K34 pertencente ao Instituto Nacional de Pesquisas da Amazônia (INPA na Reserva Biológica de Cuieiras. A análise de sensibilidade indica uma forte resposta aos parâmetros de orienta

  12. Diurnal Solar Energy Conversion and Photoprotection in Rice Canopies.

    Science.gov (United States)

    Meacham, Katherine; Sirault, Xavier; Quick, W Paul; von Caemmerer, Susanne; Furbank, Robert

    2017-01-01

    Genetic improvement of photosynthetic performance of cereal crops and increasing the efficiency with which solar radiation is converted into biomass has recently become a major focus for crop physiologists and breeders. The pulse amplitude modulated chlorophyll fluorescence technique (PAM) allows quantitative leaf level monitoring of the utilization of energy for photochemical light conversion and photoprotection in natural environments, potentially over the entire crop lifecycle. Here, the diurnal relationship between electron transport rate (ETR) and irradiance was measured in five cultivars of rice (Oryza sativa) in canopy conditions with PAM fluorescence under natural solar radiation. This relationship differed substantially from that observed for conventional short term light response curves measured under controlled actinic light with the same leaves. This difference was characterized by a reduced curvature factor when curve fitting was used to model this diurnal response. The engagement of photoprotective processes in chloroplast electron transport in leaves under canopy solar radiation was shown to be a major contributor to this difference. Genotypic variation in the irradiance at which energy flux into photoprotective dissipation became greater than ETR was observed. Cultivars capable of higher ETR at midrange light intensities were shown to produce greater leaf area over time, estimated by noninvasive imaging.

  13. Spatial variation in atmospheric nitrogen deposition on low canopy vegetation

    Energy Technology Data Exchange (ETDEWEB)

    Verhagen, Rene [Community and Conservation Ecology Group, University of Groningen, P.O. Box 14, 9750 AA Haren (Netherlands); Diggelen, Rudy van [Community and Conservation Ecology Group, University of Groningen, P.O. Box 14, 9750 AA Haren (Netherlands)]. E-mail: r.van.diggelen@rug.nl

    2006-12-15

    Current knowledge about the spatial variation of atmospheric nitrogen deposition on a local scale is limited, especially for vegetation with a low canopy. We measured nitrogen deposition on artificial vegetation at variable distances of local nitrogen emitting sources in three nature reserves in the Netherlands, differing in the intensity of agricultural practices in the surroundings. In the nature reserve located in the most intensive agricultural region nitrogen deposition decreased with increasing distance to the local farms, until at a distance of 1500 m from the local nitrogen emitting sources the background level of 15 kg N ha{sup -1} yr{sup -1} was reached. No such trend was observed in the other two reserves. Interception was considerably lower than in woodlands and hence affected areas were larger. The results are discussed in relation to the prospects for the conservation or restoration of endangered vegetation types of nutrient-poor soil conditions. - Areas with low canopy vegetation are affected over much larger distances by nitrogen deposition than woodlands.

  14. Subpixel measurement of mangrove canopy closure via spectral mixture analysis

    Institute of Scientific and Technical Information of China (English)

    Minhe JI; Jing FENG

    2011-01-01

    Canopy closure can vary spatially within a remotely sensed image pixel,but Boolean logic inherent in traditional classification methods only works at the wholepixel level.This study attempted to decompose mangrove closure information from spectrally-mixed pixels through spectral mixture analysis (SMA) for coastal wetland management.Endmembers of different surface categories were established through signature selection and training,and memberships of a pixel with respect to the surface categories were determined via a spectral mixture model.A case study involving DigitalGlobe's Quickbird highresolution multispectral imagery of Beilun Estuary,China was used to demonstrate this approach.Mangrove canopy closure was first quantified as percent coverage through the model and then further grouped into eight ordinal categories.The model results were verified using Quickbird panchromatic data from the same acquisition.An overall accuracy of 84.4% (Kappa = 0.825) was achieved,indicating good application potential of the approach in coastal resource inventory and ecosystem management.

  15. Validating spatial structure in canopy water content using geostatistics

    Science.gov (United States)

    Sanderson, E. W.; Zhang, M. H.; Ustin, S. L.; Rejmankova, E.; Haxo, R. S.

    1995-01-01

    Heterogeneity in ecological phenomena are scale dependent and affect the hierarchical structure of image data. AVIRIS pixels average reflectance produced by complex absorption and scattering interactions between biogeochemical composition, canopy architecture, view and illumination angles, species distributions, and plant cover as well as other factors. These scales affect validation of pixel reflectance, typically performed by relating pixel spectra to ground measurements acquired at scales of 1m(exp 2) or less (e.g., field spectra, foilage and soil samples, etc.). As image analysis becomes more sophisticated, such as those for detection of canopy chemistry, better validation becomes a critical problem. This paper presents a methodology for bridging between point measurements and pixels using geostatistics. Geostatistics have been extensively used in geological or hydrogeolocial studies but have received little application in ecological studies. The key criteria for kriging estimation is that the phenomena varies in space and that an underlying controlling process produces spatial correlation between the measured data points. Ecological variation meets this requirement because communities vary along environmental gradients like soil moisture, nutrient availability, or topography.

  16. A coupled energy transport and hydrological model for urban canopies

    Science.gov (United States)

    Wang, Z.; Bou-Zeid, E.; Smith, J. A.

    2011-12-01

    Urban land-atmosphere interaction has been attracting more research efforts in order to understand the complex physics of flow and mass and heat transport in urban surfaces and the lower urban atmosphere. In this work, we developed and implemented a new physically-based single-layer urban canopy model, coupling the surface exchange of energy and the subsurface transport of water/soil moisture. The new model incorporates sub-facet heterogeneity for each urban surface (roof, wall or ground). This better simulates the energy transport in urban canopy layers, especially over low-intensity built (suburban type) terrains that include a significant fraction of vegetated surfaces. We implemented detailed urban hydrological models for both natural terrains (bare soil and vegetation) and porous engineered materials with water-holding capacity (concrete, gravel, etc). The skill of the new scheme was tested against experimental data collected through a wireless sensor network deployed over the campus of Princeton University. The model performance was found to be robust and insensitive to changes in weather conditions or seasonal variability. Predictions of the volumetric soil water content were also in good agreement with field measurements, highlighting the model capability of capturing subsurface water transport for urban lawns. The new model was also applied to a case study assessing different strategies, i.e. white versus green roofs, in the mitigation of urban heat island effect.

  17. Red edge shift and biochemical content in grass canopies

    Science.gov (United States)

    Mutanga, Onisimo; Skidmore, Andrew K.

    The concentration of foliar nitrogen in tropical grass is one of the factors that explain the distribution of wildlife. Therefore, the remote sensing of foliar nitrogen contributes to a better understanding of wildlife feeding patterns. This study evaluated changes in the red edge position of the 680 nm continuum removed chlorophyll feature in the reflectance spectra of samples of Cenchus ciliaris grass grown in a greenhouse under three levels of nitrogen supply. Canopy spectral measurements from each treatment were recorded under controlled laboratory conditions over a four-week period using a GER 3700 spectroradiometer. Results indicate that the mean wavelength positions of the three fertilization treatments were statistically different. An increase in nitrogen supply yielded a shift in the red edge position to longer wavelengths. The red edge position, amplitude, slope at 713 nm and slope at 725 nm were significantly correlated to measured nitrogen concentration (bootstrapped r = 0.89, - 0.28, 0.63 and 0.75, respectively) even at canopy level. Based on these results, the red edge position is strongly correlated with biochemical concentration in plants compared to the other methods tested. The study provides conclusive evidence that confirms the strength of a red edge-nitrogen relationship that remains underused in remote sensing. This method is promising for estimating nutrient content in grasslands.

  18. Realistic Representation of Trees in an Urban Canopy Model

    Science.gov (United States)

    Ryu, Young-Hee; Bou-Zeid, Elie; Wang, Zhi-Hua; Smith, James A.

    2016-05-01

    A single-layer urban canopy model that captures sub-facet heterogeneity and various hydrological processes is further developed to explicitly incorporate trees within the urban canyon. The physical processes associated with trees are shortwave/longwave radiation exchange, including mutual interception and shading by trees and buildings and multiple reflections, sensible heat and latent heat (through transpiration) exchange, and root water uptake. A computationally-efficient geometric approach is applied to the radiation exchanges, requiring a priori knowledge of view factors. These view factors are first obtained from independent Monte Carlo ray-tracing simulations, and subsequently simple relations, which are functions of canyon aspect ratio and tree-crown ratio, are proposed to estimate them. The developed model is evaluated against field observations at two urban sites and one suburban site, showing improved performance for latent heat flux compared to the previous version that only includes ground vegetation. The trees in the urban canopy act to considerably decrease sensible heat flux and increase latent heat flux, and these effects are found to be more significant in the more dense urban site. Sensitivity tests are then performed to examine the effects of tree geometry relative to canyon geometry. The results indicate that the tree-crown size relative to canyon width is the most influential parameter to decrease sensible heat flux and increase latent heat flux, resulting in cooling of the urban area.

  19. Overview of an Urban Canopy Parameterization in COAMPS

    Energy Technology Data Exchange (ETDEWEB)

    Leach, M J; Chin, H S

    2006-02-09

    The Coupled Atmosphere/Ocean Mesoscale Prediction System (COAMPS) model (Hodur, 1997) was developed at the Naval Research Laboratory. COAMPS has been used at resolutions as small as 2 km to study the role of complex topography in generating mesoscale circulation (Doyle, 1997). The model has been adapted for use in the Atmospheric Science Division at LLNL for both research and operational use. The model is a fully, non-hydrostatic model with several options for turbulence parameterization, cloud processes and radiative transfer. We have recently modified the COAMPS code to include building and other urban surfaces effects in the mesoscale model by incorporating an urban canopy parameterization (UCP) (Chin et al., 2005). This UCP is a modification of the original parameterization of (Brown and Williams, 1998), based on Yamada's (1982) forest canopy parameterization and includes modification of the TKE and mean momentum equations, modification of radiative transfer, and an anthropogenic heat source. COAMPS is parallelized for both shared memory (OpenMP) and distributed memory (MPI) architecture.

  20. [Study on spectral reflectance characteristics of hemp canopies].

    Science.gov (United States)

    Tian, Yi-Chen; Jia, Kun; Wu, Bing-Fang; Li, Qiang-Zi

    2010-12-01

    Hemp (Cannabis sativa L.) is a special economic crop and widely used in many field. It is significative for the government to master the information about planting acreage and spatial distribution of hemp for hemp industrial policy decision in China. Remote sensing offers a potential way of monitoring large area for the cultivation of hemp. However, very little study on the spectral properties of hemp is available in the scientific literature. In the present study, the spectral reflectance characteristics of hemp canopy were systematically analyzed based on the spectral data acquired with ASD FieldSpec portable spectrometer. The wavebands and its spectral resolution for discriminating hemp from other plants were identified using difference analysis. The major differences in canopy reflectance of hemp and other plants were observed near 530, 552, 734, 992, 1 213, 1 580 and 2 199 nm, and the maximal difference is near 734 nm. The spectral resolution should be 30 nm or less in visible and near infrared regions, and 50 nm or less in middle infrared regions.

  1. a Radiative Transfer Equation/phase Function Approach to Vegetation Canopy Reflectance Modeling

    Science.gov (United States)

    Randolph, Marion Herbert

    Vegetation canopy reflectance models currently in use differ considerably in their treatment of the radiation scattering problem, and it is this fundamental difference which stimulated this investigation of the radiative transfer equation/phase function approach. The primary objective of this thesis is the development of vegetation canopy phase functions which describe the probability of radiation scattering within a canopy in terms of its biological and physical characteristics. In this thesis a technique based upon quadrature formulae is used to numerically generate a variety of vegetation canopy phase functions. Based upon leaf inclination distribution functions, phase functions are generated for plagiophile, extremophile, erectophile, spherical, planophile, blue grama (Bouteloua gracilis), and soybean canopies. The vegetation canopy phase functions generated are symmetric with respect to the incident and exitant angles, and hence satisfy the principle of reciprocity. The remaining terms in the radiative transfer equation are also derived in terms of canopy geometry and optical properties to complete the development of the radiative transfer equation/phase function description for vegetation canopy reflectance modeling. In order to test the radiative transfer equation/phase function approach the iterative discrete ordinates method for solving the radiative transfer equation is implemented. In comparison with field data, the approach tends to underestimate the visible reflectance and overestimate infrared reflectance. The approach does compare well, however, with other extant canopy reflectance models; for example, it agrees to within ten to fifteen percent of the Suits model (Suits, 1972). Sensitivity analysis indicates that canopy geometry may influence reflectance as much as 100 percent for a given wavelength. Optical thickness produces little change in reflectance after a depth of 2.5 (Leaf area index of 4.0) is reached, and reflectance generally increases

  2. Thermal Imaging of Forest Canopy Temperatures: Relationships with Biological and Biophysical Drivers and Ecosystem Fluxes

    Science.gov (United States)

    Still, C. J.; Kim, Y.; Hanson, C. V.; Law, B. E.; Kwon, H.; Schulze, M.; Pau, S.; Detto, M.

    2015-12-01

    Temperature is a primary environmental control on plant processes at a range of spatial and temporal scales, affecting enzymatic reactions, ecosystem biogeochemistry, and species distributions. Although most focus is on air temperature, the radiative or skin temperature of plants is more relevant. Canopy skin temperature dynamics reflect biophysical, physiological, and anatomical characteristics and interactions with environmental drivers, and can be used to examine forest responses to stresses like droughts and heat waves. Direct measurements of plant canopy temperatures using thermocouple sensors have been challenging and offer limited information. Such measurements are usually conducted over short periods of time and a limited spatial extent of the canopy. By contrast, thermal infrared (TIR) imaging allows for extensive temporal and spatial measurement of canopy temperature regimes. We present results of TIR imaging of forest canopies at a range of well-studied forest sites in the United States and Panama. These forest types include temperate rainforests, a semi­arid pine forest, and a semi­deciduous tropical forest. Canopy temperature regimes at these sites are highly variable spatially and temporally and display frequent departures from air temperature, particularly during clear sky conditions. Canopy tissue temperatures are often warmer (daytime) and colder (nighttime) than air temperature, and canopy structure seems to have a large influence on the thermal regime. Additionally, comparison of canopy temperatures to eddy covariance fluxes of carbon dioxide, water vapor, and energy reveals relationships not apparent using air temperature. Initial comparisons between our forest canopy temperatures and remotely sensed skin temperature using Landsat and MODIS data show reasonably good agreement. We conclude that temporal and spatial changes in canopy temperature and its relationship to biological and environmental factors can improve our understanding of how

  3. Weak Environmental Controls of Tropical Forest Canopy Height in the Guiana Shield

    Directory of Open Access Journals (Sweden)

    Youven Goulamoussène

    2016-09-01

    Full Text Available Canopy height is a key variable in tropical forest functioning and for regional carbon inventories. We investigate the spatial structure of the canopy height of a tropical forest, its relationship with environmental physical covariates, and the implication for tropical forest height variation mapping. Making use of high-resolution maps of LiDAR-derived Digital Canopy Model (DCM and environmental covariates from a Digital Elevation Model (DEM acquired over 30,000 ha of tropical forest in French Guiana, we first show that forest canopy height is spatially correlated up to 2500 m. Forest canopy height is significantly associated with environmental variables, but the degree of correlation varies strongly with pixel resolution. On the whole, bottomland forests generally have lower canopy heights than hillslope or hilltop forests. However, this global picture is very noisy at local scale likely because of the endogenous gap-phase forest dynamic processes. Forest canopy height has been predictively mapped across a pixel resolution going from 6 m to 384 m mimicking a low resolution case of 3 points·km − 2 . Results of canopy height mapping indicated that the error for spatial model with environment effects decrease from 8.7 m to 0.91 m, depending of the pixel resolution. Results suggest that, outside the calibration plots, the contribution of environment in shaping the global canopy height distribution is quite limited. This prevents accurate canopy height mapping based only on environmental information, and suggests that precise canopy height maps, for local management purposes, can only be obtained with direct LiDAR monitoring.

  4. New generation of airborne lidar for forest canopy sampling

    Science.gov (United States)

    Cuesta, J.; Chazette, P.; Allouis, T.; Sanak, J.; Genou, P.; Flamant, P. H.; Durrieu, S.; Toussaint, F.

    2009-04-01

    Cuesta J. (1,2), Chazette P. (1,3), Allouis T. (4), Sanak J. (1,3), Genau P. (2), Flamant P.H. (1), Durrieu S. (4) and Toussaint F. Biomass in forest cover is an essential actor in climate regulation. It is one of the principal sinks of atmospheric CO2 and a major water cycle regulator. In the coming years, climate change may generate an increase in the frequency of fires in the ecosystems, which are already affected in regions as southern Europe, near the Mediterranean basin. For a better understanding and prevention of the risks created by the propagation and intensity of fires, one requires a detailed characterization of the structural parameters of the forest canopy. Such description is as well essential for a proper management and sustainable use of forest resources and the characterization of the evolution of bio-diversity. These environmental and socio-economical issues motivate the development of new remote sensing instruments and methodology, particularly active remote sensing by lidar. These tools should be evaluated in order to achieve a global survey of the forest cover by satellite observation. In this framework, a French effort of the Institut Pierre Simon Laplace (LMD, LSCE and LATMOS) and the CEMAGREF has led to the deployment of a new airborne lidar prototype to study the vertical distribution of the forest canopy in the Landes region in France, around the Arcachon basin and Mimizan. The measuring system is the ultra-violet new generation lidar LAUVA (Lidar Aérosol UtraViolet (Aéroporté), Chazette et al., EST 2007), onboard an Ultra-Light Airplane (ULA). This system was developed by the Comissarait pour l'Energie Atomique and the Centre National de Recherches Scientifiques, originally for atmospheric applications, and it was successfully used in West Africa in the framework of the African Monsoon Multidisciplinary Analyses. After a proper adaptation, this compact and polyvalent lidar onboard an ULA is capable of measuring the forest canopy with

  5. Forest canopy water fluxes can be estimated using canopy structure metrics derived from airborne light detection and ranging (LiDAR)

    DEFF Research Database (Denmark)

    Schumacher, Johannes; Christiansen, Jesper Riis

    2015-01-01

    throughfall (TF). We investigated the possibilities of estimating TF based on bulk Pr and canopy structure estimated from airborne light detection and ranging (LiDAR) data. Bulk Pr and TF fluxes combined with airborne LiDAR data from 11 locations representing the most common forest types (mono......Forests contribute to improve water quality, affect drinking water resources, and therefore influence water supply on a regional level. The forest canopy structure affects the retention of precipitation (Pr) in the canopy and hence the amount of water transferred to the forest floor termed canopy......-species broadleaf/coniferous and mixed forests) in Denmark were used to develop empirical models to estimate TF on a monthly, seasonal, and annual basis. This new approach offers the opportunity to greatly improve predictions of TF on catchment wide scales. Overall, results show that TF can be estimated by Pr...

  6. Simultaneous Measurement of Leaf and Whole-Canopy Solar-Induced Fluorescence using Very-High-Resolution Imaging Spectroscopy

    Science.gov (United States)

    Silva, C. E.; Cushman, K. C.; Wiseman, S. M.; Yang, X.; Kellner, J. R.

    2015-12-01

    Incoming solar radiation absorbed by chlorophyll molecules drives the light-dependent reactions of photosynthesis. However, a portion of the radiation absorbed by chlorophyll is dissipated as heat or emitted as fluorescence. Therefore, solar-induced fluorescence (SIF) is mechanistically linked with the instantaneous rate of photosynthesis at the molecular level. Recent studies have shown SIF is correlated with gross primary production (GPP) at the level of individual leaves as well as plant canopies, indicating SIF measurements via satellite and airborne remote sensing may improve estimates of terrestrial GPP. However, accurate inference of canopy GPP from SIF measurements requires resolving several challenges. One challenge is the contribution from leaves in the canopy interior to total canopy SIF. Remotely observed canopy SIF is dominated by the upper canopy, because photons fluoresced within the canopy interior are re-absorbed by other leaves. However, the contribution of interior canopy leaves to total canopy GPP is non-negligible. Models indicate that leaf-level GPP plateaus with increasing SIF, whereas the relationship between whole-canopy GPP and SIF does not saturate. Here we use hourly SIF measurements from a VNIR imaging spectrometer mounted on a canopy tower to quantify within-canopy variation in SIF. We examine leaf-level SIF at < 1 cm spatial resolution in directly illuminated leaves versus leaves in the canopy interior at different canopy heights over the course of several days. The within-canopy variation in SIF demonstrates how the leaf-level contribution to total canopy photosynthesis likely varies throughout the canopy volume. Our results can help inform SIF-derived GPP estimates, which are crucial to quantifying the response of terrestrial ecosystems to climate change.

  7. Integrating soil information into canopy sensor algorithms for improved corn nitrogen rate recommendation

    Science.gov (United States)

    Crop canopy sensors have proven effective at determining site-specific nitrogen (N) needs, but several Midwest states use different algorithms to predict site-specific N need. The objective of this research was to determine if soil information can be used to improve the Missouri canopy sensor algori...

  8. High-Resolution Forest Canopy Height Estimation in an African Blue Carbon Ecosystem

    Science.gov (United States)

    Lagomasino, David; Fatoyinbo, Temilola; Lee, Seung-Kuk; Simard, Marc

    2015-01-01

    Mangrove forests are one of the most productive and carbon dense ecosystems that are only found at tidally inundated coastal areas. Forest canopy height is an important measure for modeling carbon and biomass dynamics, as well as land cover change. By taking advantage of the flat terrain and dense canopy cover, the present study derived digital surface models (DSMs) using stereophotogrammetric techniques on high-resolution spaceborne imagery (HRSI) for southern Mozambique. A mean-weighted ground surface elevation factor was subtracted from the HRSI DSM to accurately estimate the canopy height in mangrove forests in southern Mozambique. The mean and H100 tree height measured in both the field and with the digital canopy model provided the most accurate results with a vertical error of 1.18-1.84 m, respectively. Distinct patterns were identified in the HRSI canopy height map that could not be discerned from coarse shuttle radar topography mission canopy maps even though the mode and distribution of canopy heights were similar over the same area. Through further investigation, HRSI DSMs have the potential of providing a new type of three-dimensional dataset that could serve as calibration/validation data for other DSMs generated from spaceborne datasets with much larger global coverage. HSRI DSMs could be used in lieu of Lidar acquisitions for canopy height and forest biomass estimation, and be combined with passive optical data to improve land cover classifications.

  9. Elevated CO2 and nitrogen availability have interactive effects on canopy carbon gain in rice

    NARCIS (Netherlands)

    Anten, N.P.R.; Hirose, T.; Onoda, Y.; Kinugasa, T.; Kim, H.Y.; Okada, M.; Kobayashi, K.

    2004-01-01

    Here we analysed the effects of CO2 (C-a) elevation and nitrogen availability on canopy structure, leaf area index (LAI) and canopy photosynthesis of rice (Oryza sativa). Rice was grown at ambient and elevated C-a (c. 200 mumol mol(-1) above ambient, using the free-air CO2 enrichment, FACE) and at t

  10. Leaf-on canopy closure in broadleaf deciduous forests predicted during winter

    Science.gov (United States)

    Twedt, Daniel J.; Ayala, Andrea J.; Shickel, Madeline R.

    2015-01-01

    Forest canopy influences light transmittance, which in turn affects tree regeneration and survival, thereby having an impact on forest composition and habitat conditions for wildlife. Because leaf area is the primary impediment to light penetration, quantitative estimates of canopy closure are normally made during summer. Studies of forest structure and wildlife habitat that occur during winter, when deciduous trees have shed their leaves, may inaccurately estimate canopy closure. We estimated percent canopy closure during both summer (leaf-on) and winter (leaf-off) in broadleaf deciduous forests in Mississippi and Louisiana using gap light analysis of hemispherical photographs that were obtained during repeat visits to the same locations within bottomland and mesic upland hardwood forests and hardwood plantation forests. We used mixed-model linear regression to predict leaf-on canopy closure from measurements of leaf-off canopy closure, basal area, stem density, and tree height. Competing predictive models all included leaf-off canopy closure (relative importance = 0.93), whereas basal area and stem density, more traditional predictors of canopy closure, had relative model importance of ≤ 0.51.

  11. [Estimation of forest canopy chlorophyll content based on PROSPECT and SAIL models].

    Science.gov (United States)

    Yang, Xi-guang; Fan, Wen-yi; Yu, Ying

    2010-11-01

    The forest canopy chlorophyll content directly reflects the health and stress of forest. The accurate estimation of the forest canopy chlorophyll content is a significant foundation for researching forest ecosystem cycle models. In the present paper, the inversion of the forest canopy chlorophyll content was based on PROSPECT and SAIL models from the physical mechanism angle. First, leaf spectrum and canopy spectrum were simulated by PROSPECT and SAIL models respectively. And leaf chlorophyll content look-up-table was established for leaf chlorophyll content retrieval. Then leaf chlorophyll content was converted into canopy chlorophyll content by Leaf Area Index (LAD). Finally, canopy chlorophyll content was estimated from Hyperion image. The results indicated that the main effect bands of chlorophyll content were 400-900 nm, the simulation of leaf and canopy spectrum by PROSPECT and SAIL models fit better with the measured spectrum with 7.06% and 16.49% relative error respectively, the RMSE of LAI inversion was 0. 542 6 and the forest canopy chlorophyll content was estimated better by PROSPECT and SAIL models with precision = 77.02%.

  12. Towards Automated Characterization of Canopy Layering in Mixed Temperate Forests Using Airborne Laser Scanning

    Directory of Open Access Journals (Sweden)

    Reik Leiterer

    2015-11-01

    Full Text Available Canopy layers form essential structural components, affecting stand productivity and wildlife habitats. Airborne laser scanning (ALS provides horizontal and vertical information on canopy structure simultaneously. Existing approaches to assess canopy layering often require prior information about stand characteristics or rely on pre-defined height thresholds. We developed a multi-scale method using ALS data with point densities >10 pts/m2 to determine the number and vertical extent of canopy layers (canopylayer, canopylength, seasonal variations in the topmost canopy layer (canopytype, as well as small-scale heterogeneities in the canopy (canopyheterogeneity. We first tested and developed the method on a small forest patch (800 ha and afterwards tested transferability and robustness of the method on a larger patch (180,000 ha. We validated the approach using an extensive set of ground data, achieving overall accuracies >77% for canopytype and canopyheterogeneity, and >62% for canopylayer and canopylength. We conclude that our method provides a robust characterization of canopy layering supporting automated canopy structure monitoring.

  13. Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis

    Science.gov (United States)

    The proliferation of tower-mounted cameras co-located with eddy covariance instrumentation provides a novel opportunity to better understand the relationship between canopy phenology and the seasonality of canopy photosynthesis. In this paper, we describe the abilities and limitations of webcams to ...

  14. Evaluating the influence of canopy species and meteorological factors on throughfall drop size distribution

    Science.gov (United States)

    Nanko, Kazuki; Hotta, Norifumi; Suzuki, Masakazu

    2006-10-01

    SummaryDrop size distributions (DSDs) were continuously and simultaneously measured by laser raindrop-sizing instruments (LD gauges) in an open site and in three forest stands consisting of Japanese cypress (CY: Chamaecyparis obtusa), Japanese cedar (CD: Cryptomeria japonica), and sawtooth oak (SO: Quercus acutissima), during three rainfall events in Tokyo, Japan. Drop data during the whole observation period were used in an hourly based data set and divided into three meteorological condition groups: calm, heavy rain, and strong wind. Evaluating the influence of canopy species and meteorological factors on the D50 and DSD difference revealed some throughfall DSD characteristics. First, throughfall had different DSDs among canopy species under conditions of little canopy vibration with low rainfall intensity and wind speed; D50 values were 2.00, 2.93, and 3.60 mm in CY, CD, and SO, respectively. Second, throughfall contained smaller drops under conditions of severe canopy vibration, with high rainfall intensity and/or high wind speed, than under calm meteorological conditions. Vibration of the canopy could reduce water coalescence and increase spattered rainwater from canopies. Third, the influence of meteorological factors was different between canopy species; SO was readily influenced but CY was not. Moreover, results from this study implied that throughfall consisted of three drop components - free throughfall, drips, and splash droplets - and suggested a process for generating throughfall DSD that could explain the variations in throughfall DSDs between canopy species and that influenced by meteorological factors.

  15. Accounting for canopy shading and emissivity in simulated radiation fields over a complex mountainous region (Invited)

    Science.gov (United States)

    Marks, D. G.; Essery, R.; Link, T. E.; Winstral, A. H.; Reba, M. L.; Pomeroy, J. W.

    2009-12-01

    Radiation fields are required to model snow and hydrologic processes and properties over forested mountain regions. We present a method that utilizes a representation of terrain and forest structure (height, crown and trunk shape, canopy density and spacing) to modulate above-canopy solar and thermal radiation fields for canopy shading and emissivity effects. The method preserves gap fraction, and accounts for terrain features of slope, aspect and local horizon-induced terrain shading. The method is initiated over a very high resolution, pre-determined distribution of canopy crowns and gaps. For development of the method, terrain structure information was derived from a LiDAR representation of both terrain and canopy over the Fraser Experimental Forest in Colorado. The method can also be applied to an artificial canopy structure, based on a statistical distribution of canopy crowns and gaps as simulated over a region. Though the method is computationally expensive, once the shading and emissivity functions have been computed for a full range of azmuthal conditions, they can be retained in look-up tables, and scaled to an arbitrary set of radiation conditions. The method is applied over the LiDAR domain at the Colorado site using by correcting above-canopy radiation fields for a series of selected dates representing high and low sun angles, and a variety of snow depth conditions.

  16. Automated detection of branch dimensions in woody skeletons of leafless fruit tree canopies

    NARCIS (Netherlands)

    Bucksch, A.; Fleck, S.

    2009-01-01

    Light driven physiological processes of tree canopies need to be modelled based on detailed 3Dcanopy structure – we explore the possibilities offered by terrestrial LIDAR to automatically represent woody skeletons of leafless trees as a basis for adequate models of canopy structure. The automatic ev

  17. Ground-Based Robotic Sensing of an Agricultural Sub-Canopy Environment

    Science.gov (United States)

    Burns, A.; Peschel, J.

    2015-12-01

    Airborne remote sensing is a useful method for measuring agricultural crop parameters over large areas; however, the approach becomes limited to above-canopy characterization as a crop matures due to reduced visual access of the sub-canopy environment. During the growth cycle of an agricultural crop, such as soybeans, the micrometeorology of the sub-canopy environment can significantly impact pod development and reduced yields may result. Larger-scale environmental conditions aside, the physical structure and configuration of the sub-canopy matrix will logically influence local climate conditions for a single plant; understanding the state and development of the sub-canopy could inform crop models and improve best practices but there are currently no low-cost methods to quantify the sub-canopy environment at a high spatial and temporal resolution over an entire growth cycle. This work describes the modification of a small tactical and semi-autonomous, ground-based robotic platform with sensors capable of mapping the physical structure of an agricultural row crop sub-canopy; a soybean crop is used as a case study. Point cloud data representing the sub-canopy structure are stored in LAS format and can be used for modeling and visualization in standard GIS software packages.

  18. Modeling photosynthesis of discontinuous plant canopies by linking Geometric Optical Radiative Transfer model with biochemical processes

    Science.gov (United States)

    Xin, Q.; Gong, P.; Li, W.

    2015-02-01

    Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily time scales. We also demonstrate that the ambient CO2 concentration influences daytime vegetation photosynthesis, which needs to be considered in state-of-the-art biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  19. Regional and historical factors supplement current climate in shaping global forest canopy height

    DEFF Research Database (Denmark)

    Zhang, Jian; Nielsen, Scott; Mao, Lingfeng;

    2016-01-01

    Summary Canopy height is a key factor that affects carbon storage, vegetation productivity and biodiversity in forests, as well as an indicator of key processes such as biomass allocation. However, global variation in forest canopy height and its determinants are poorly known. We used global data...

  20. Piracy in the high trees: ectomycorrhizal fungi from an aerial 'canopy soil' microhabitat.

    Science.gov (United States)

    Orlovich, David A; Draffin, Suzy J; Daly, Robert A; Stephenson, Steven L

    2013-01-01

    The mantle of dead organic material ("canopy soil") associated with the mats of vascular and nonvascular epiphytes found on the branches of trees in the temperate rainforests along the southwestern coast of the South Island of New Zealand were examined for evidence of ectomycorrhizal fungi. DNA sequencing and cluster analysis were used to identify the taxa of fungi present in 74 root tips collected from the canopy soil microhabitat of three old growth Nothofagus menziesii trees in the South West New Zealand World Heritage Area. A diverse assemblage of ectomycorrhizal fungi was found to infect an extensive network of adventitious canopy roots of Nothofagus menziesii in this forest, including 14 phylotypes from nine genera of putative ectomycorrhizal fungi. Seven of the genera identified previously were known to form ectomycorrhizas with terrestrial roots of Nothofagus: Cortinarius, Russula, Cenococcum, Thelephora/Tomentella, Lactarius and Laccaria; two, Clavulina and Leotia, previously have not been reported forming ectomycorrhizas with Nothofagus. Canopy ectomycorrhizas provide an unexpected means for increased host nutrition that may have functional significance in some forest ecosystems. Presumably, canopy ectomycorrhizas on host adventitious roots circumvent the tree-ground-soil nutrient cycle by accessing a wider range of nutrients directly in the canopy than would be possible for non-mycorrhizal or arbuscular mycorrhizal canopy roots. In this system, both host and epiphytes would seem to be in competition for the same pool of nutrients in canopy soil.

  1. Large eddy simulations of forest canopies for determination of biological dispersal by wind

    Science.gov (United States)

    Bohrer, Gil

    Forest canopies interact with the atmosphere by emitting heat and moisture fluxes, by dragging the flow and by forming obstacles to the flow. Forests are heterogeneous with structural features at a vast range of length scale. The atmospheric effects of micro-scale canopy structures, which describe differences between individual trees, have so far been poorly studied. Changes to turbulence, flow patterns, and fluxes in and above the canopy strongly affect the dispersal of seeds and its ecological consequences because they are strongly dependent on the far "tail" of the dispersal distribution. The Regional Atmospheric Modeling System (RAMS) is further developed to operate as a large-eddy simulation (LES) at high resolution with 3D heterogeneous forest canopies. This RAMS-based Forest LES (RAFLES) represents the canopy through drag, volume restriction by stems, and heat and moisture fluxes in the canopy domain. The model incorporates explicit canopy descriptions, which can be obtained from observations, or from the virtual-canopy generator, which is developed here. RAFLES is used to simulate noontime conditions for two days at the hardwood stand in the Duke Forest, representing two sets of atmospheric and canopy conditions. The results are evaluated against eddy-flux observations from these days. RAFLES compares well to the observed data. Comparison between artificial homogeneous cases and natural heterogeneous cases reveals that small-scale canopy heterogeneity affects the profiles of momentum and scalar fluxes, and modifies the spatial structure of the flow. Low areas in the canopy promote ejection events, which leads to a correlation between the canopy height and flow variables that extends up to four times the canopy height. Seed dispersal kernels simulated with RAFLES closely match those measured in seed release experiments in a temperate forest. It is also used to examine potential biases resulting from simplifications in common dispersal models, such as planar

  2. Variation of directional reflectance factors with structural changes of a developing alfalfa canopy

    Science.gov (United States)

    Kirchner, J. A.; Kimes, D. S.; Mcmurtrey, J. E., III

    1982-01-01

    Directional reflectance factors of an alfalfa canopy were determined and related to canopy structure, agronomic variables, and irradiance conditions at four periods during a cutting cycle. Nadir and off-nadir reflectance factors decreased with increasing biomass in Thematic Mapper band 3(0.63-0.69 micrometer) and increased with increasing biomass in band 4(0.76-0.90 micrometer). The sensor view angle had less impact on perceived reflectance as the alfalfa progressed from an erectophile canopy of stems after harvest to a near planophile canopy of leaves at maturity. Studies of directional reflectance are needed for testing and upgrading vegetation canopy models and to aid in the complex interpretation problems presented by aircraft scanners and pointable satellites where illumination and viewing geometries may vary widely. Distinct changes in the patterns of radiance observed by a sensor as structural and biomass changes occur are keys to monitoring the growth and condition of crops.

  3. How does canopy wetness shape evapotranspiration in a mountain cloud forest

    Science.gov (United States)

    Chu, H.-S.; Chang, S.-C.; Lin, Y.-Z.; Hsia, Y.-J.

    2010-07-01

    Interception plays an important role in the hydrological characteristics of cloud forest ecosystems due to frequent wetness of the canopy. The dynamics of this canopy interception processes are ecologically important for partitioning between interception evaporation and transpiration. Long term meteorological observations at the Chi-Lan Mountain site (24°35’N, 121°25’E) indicated that fog weather accounts for one third of the time on a year around and mainly prevails in the late afternoon and evening. However, it is still not clear how long the interception water could last on canopy surface under such diurnal foggy patterns and how this wetness further shapes the partition between interception evaporation and transpiration. In order to explore the evapotranspiration patterns under wet canopy conditions, three-month intensive experiment was conducted at the CLM site from 2009/4/28 to 7/21. Eddy covariance method was applied to measure the net water vapor exchange between ecosystem and atmosphere. An open/closed-path eddy covariance system, including a sonic anemometer (Campbell CSAT3), an open path infrared gas analyzer (Licor LI7500) and a closed path infrared gas analyzer (Licor LI7000), was mounted at 1.8-fold of canopy height. The S-type sap flow sensors (Ecomatik SF-L) were mounted at 1.3 m height of trunk on five representative Chamaecyparis obtusa var. formosana trees as an index of transpiration rate. Three leaf wetness sensors (Campbell LW237) and two infrared surface thermometers (Apogee IRTS-P) were added to monitor the wetness and surface temperature of canopy. The result showed that canopy wetness played a crucial role in partitioning the interception evaporation and transpiration at this forest stand. Evapotranspiration either under wet or dry canopy conditions was mainly driven by the evapotranspiration demand, as indicated by the potential evapotranspiration. However, evapotranspiration was lower for dry canopy condition. While total

  4. Attributes for NHDPlus Catchments (Version 1.1) for the Conterminous United States: NLCD 2001 Tree Canopy

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data set represents the mean percentage of tree canopy from the Canopy Layer of the National Land Cover Dataset 2001, (LaMotte and Wieczorek, 2010), compiled...

  5. The influence of current speed and vegetation density on flow structure in two macrotidal eelgrass canopies

    Science.gov (United States)

    Lacy, Jessica R.; Wyllie-Echeverria, Sandy

    2011-01-01

    The influence of eelgrass (Zostera marina) on near-bed currents, turbulence, and drag was investigated at three sites in two eelgrass canopies of differing density and at one unvegetated site in the San Juan archipelago of Puget Sound, Washington, USA. Eelgrass blade length exceeded 1 m. Velocity profiles up to 1.5 m above the sea floor were collected over a spring-neap tidal cycle with a downward-looking pulse-coherent acoustic Doppler profiler above the canopies and two acoustic Doppler velocimeters within the canopies. The eelgrass attenuated currents by a minimum of 40%, and by more than 70% at the most densely vegetated site. Attenuation decreased with increasing current speed. The data were compared to the shear-layer model of vegetated flows and the displaced logarithmic model. Velocity profiles outside the meadows were logarithmic. Within the canopies, most profiles were consistent with the shear-layer model, with a logarithmic layer above the canopy. However, at the less-dense sites, when currents were strong, shear at the sea floor and above the canopy was significant relative to shear at the top of the canopy, and the velocity profiles more closely resembled those in a rough-wall boundary layer. Turbulence was strong at the canopy top and decreased with height. Friction velocity at the canopy top was 1.5–2 times greater than at the unvegetated, sandy site. The coefficient of drag CD on the overlying flow derived from the logarithmic velocity profile above the canopy, was 3–8 times greater than at the unvegetated site (0.01–0.023 vs. 2.9 × 10−3).

  6. Changes in Amazon Forest Structure and Canopy Illumination from Multi-temporal Lidar Data

    Science.gov (United States)

    Leitold, V.; Morton, D. C.; Keller, M. M.; Cook, B.

    2015-12-01

    Lidar remote sensing of tropical forests provides unprecedented detail on 3D vegetation structure to support in-depth studies of ecosystem processes and carbon dynamics across large landscapes. Here, we used high-resolution, multi-temporal airborne lidar data from nine terra firme forest sites (total area = 3500 ha) in the Brazilian Amazon to estimate spatial and temporal patterns of forest disturbance and associated changes in canopy illumination. Across sites, we observed large variability in mean canopy height (15.7 m to 28.1 m) and the vertical distributions of forest vegetation and light penetration. At the site scale, lidar-derived canopy height models from repeat surveys showed minimal change in canopy structure over time intervals of 1 to 4 years, with nearly identical initial and final canopy height distributions. Annualized rates of total canopy turnover, based on losses in canopy height between lidar collections, ranged from 0.66 to 2.57% yr-1, with a mean value of 1.59% yr-1 across sites. Field estimates of tree crown sizes were used to classify canopy turnover into branch fall, tree fall and multiple tree fall events. Partial crown losses occurred most frequently across the landscape (40% of all events), but accounted for only a small fraction of the total turnover area (10%). Size-frequency distributions of canopy turnover followed a power-law distribution with a decline in the number of events with increasing size across all sites (range of λ between 1.26 - 1.35). The distributions of illumination conditions before and after disturbance events were inverted, as fully-illuminated crowns were replaced by low-light conditions within patches of canopy loss. Estimates of the spatial and temporal patterns of Amazon forest disturbance and recovery from multi-temporal lidar data complement information from plot-scale (≤ 1ha) studies to provide a more complete understanding of regional variability in ecosystem structure and function under current climate.

  7. Waveform- and Terrestrial Lidar Assessment of the Usual (Structural) Suspects in a Forest Canopy

    Science.gov (United States)

    van Aardt, J. A.; Romanczyk, P.; Kelbe, D.; van Leeuwen, M.; Cawse-Nicholson, K.; Gough, C. M.; Kampe, T. U.

    2015-12-01

    Forest inventory has evolved from standard stem diameter-height relationships, to coarse canopy metrics, to more involved ecologically-meaningful variables, such as leaf area index (LAI) and even canopy radiative transfer as a function of canopy gaps, leaf clumping, and leaf angle distributions. Accurate and precise measurement of the latter set of variables presents a challenge to the ecological and modeling communities; however, relatively novel remote sensing modalities, e.g., waveform lidar (wlidar) and terrestrial lidar systems (TLS), have the potential to adress this challenge. Research teams at Rochester Institute of Technology (RIT) and the Virginia Commonwealth University (VCU) have been collaborating with the National Ecological Observation Network (NEON) to assess vegetation canopy structure and variation at the University of Michigan Biological Research Station and the NEON Northeast domain (Harvard Forest, MA). Airborne small-footprint wlidar data, in-situ TLS data, and first-principles, physics-based simulation tools are being used to study (i) the impact of vegetation canopy geometric elements on wlidar signals (twigs and petioles have been deemed negligible), (ii) the analysis of airborne wlidar data for top-down assessment of canopy metrics such as LAI, and (iii) our ability to extract "bottom-up" canopy structure from TLS using scans registered to each other using a novel marker-free registration approach (e.g., basal area: R2=0.82, RMSE=7.43 m2/ha). Such studies indicate that we can potentially assess radiative transfer through vegetation canopies remotely using a vertically-stratified approach with wlidar, and augment such an approach via rapid-scan TLS technology to gain a better understanding of fine-scale variation in canopy structure. This in turn is key to quantifying and modeling radiative transfer based on understanding of forest canopy structural change as a function of ecosystem development, climate, and anthropogenic drivers.

  8. Canopy Level Chlorophyll Fluorescence and the PRI in a Cornfield

    Science.gov (United States)

    Middleton, Elizabeth M.; Cheng, Yen-Ben; Corp, Lawrence A.; Campbell, Petya K. E.; Huemmrich, K. Fred; Zhang, Qingyuan; Kustas, William P.

    2012-01-01

    Two bio-indicators, the Photochemical Reflectance Index (PRI) and solar-induced red and far-red Chlorophyll Fluorescence (SIF), were derived from directional hyperspectral observations and studied in a cornfield on two contrasting days in the growing season. Both red and far-red SIF exhibited higher values on the day when the canopy in the early senescent stage, but only the far-red SIF showed sensitivity to viewing geometry. Consequently, the red/far-red SIF ratio varied greatly among azimuth positions while the largest values were obtained for the "hotspot" at both growth stages. This ratio was lower (approx.0.88 +/- 0.4) in early July than in August when the ratio approached equivalence (near approx.1). In concert, the PRI exhibited stronger responses to both zenith and azimuth angles and different values on the two growth stages. The potential of using these indices to monitor photosynthetic activities needs further investigation

  9. Canopy near-infrared reflectance and terrestrial photosynthesis

    Science.gov (United States)

    Badgley, Grayson; Field, Christopher B.; Berry, Joseph A.

    2017-01-01

    Global estimates of terrestrial gross primary production (GPP) remain highly uncertain, despite decades of satellite measurements and intensive in situ monitoring. We report a new approach for quantifying the near-infrared reflectance of terrestrial vegetation (NIRV). NIRV provides a foundation for a new approach to estimate GPP that consistently untangles the confounding effects of background brightness, leaf area, and the distribution of photosynthetic capacity with depth in canopies using existing moderate spatial and spectral resolution satellite sensors. NIRV is strongly correlated with solar-induced chlorophyll fluorescence, a direct index of photons intercepted by chlorophyll, and with site-level and globally gridded estimates of GPP. NIRV makes it possible to use existing and future reflectance data as a starting point for accurately estimating GPP.

  10. Modelisation of the optical scattering behaviour of the vegetation canopies

    Science.gov (United States)

    Kimes, D. S.

    1985-01-01

    The three dimensional model of Kimes (1984) which can treat three dimensional variability in heterogeneous scenes, was used to test and expand physical scattering mechanisms involved in reflectance distribution dynamics by analyzing modeling and field data. The major physical phenomena causing the directional scattering behavior of vegetation canopies are presented. These include the strong anisotropic properties of the soil, and the anisotropic scattering properties of the vegetation as described by the phase function of the leaves and the geometric effects caused by vertical layers of leaves. This knowledge serves as a basis for defining optimum directional view angles for remote sensing strategies. An example on using knowledge of the scattering behavior of vegetation to develop techniques for extracting vegetation parameters (spectral albedo) from directional reflectance data is presented.

  11. a Bidirectional Reflectance Model for Non-Random Canopies.

    Science.gov (United States)

    Welles, Jonathan Mark

    The general array model (GAR) is extended to calculate bidirectional reflectance (reflectance as a function of angle of view and angle of illumination) of a plant stand. The new model (BIGAR) defines the plant canopy as one or more foliage-containing ellipsoids arranged in any desired pattern. Foliage is assumed randomly distributed within each ellipsoid, with a specified distribution of inclination angles and random azimuthal orientation distribution. A method of specifying sub-ellipsoids that contain foliage of varying properties is discussed. Foliage is assumed to scatter radiation in a Lambertian fashion. The soil bidirectional reflectance is modelled separately as a boundary condition. The reflectance of any given grid point within the plant stand is calculated from the incident radiation (direct beam, diffuse sky, and diffuse scattered from the soil and foliage) and a view weighting factor that is based upon how much of the view is occupied by that particular grid point. Integrating this over a large number of grid locations provides a prediction of the bidirectional reflectance. Model predictions are compared with measurements in corn and soybean canopies at three stages of growth. The model does quite well in predicting the general shape and dynamics of the measured bidirectional reflectance factors, and rms errors are typically 10% to 15% (relative) of the integrated reflectance value. The effect of rows is evident in both the measurements and the model in the early part of the growing season. The presence of tassles in the corn may be the cause of unpredicted row effects later in the season. Predicted nadir reflectances are accurate for soybean, but are low for full cover corn. The presence of specular reflection causes the model to slightly underpredict reflectances looking toward the sun at large solar zenith angles.

  12. Identification of Wheat Canopy Structure Using Hyperspectral Data

    Institute of Scientific and Technical Information of China (English)

    LU Yan-li; WANG Ji-hua; LI Shao-kun; XIE Rui-zhi; GAO Shi-ju; MA Da-ling

    2005-01-01

    Some winter wheat varieties were selected in this experiment. The results were as follows: 1) Leaf orientation value (LOV) and leaf area index (LAI) of wheat had different contributions to canopy spectral reflectance (CSR). For example, LOV affected greatly canopy spectra more than LAI did in jointing stage, but LAI had a greater effect on CSR than LOV did after the ground was near to be covered completely. 2) Twenty treatments including different varieties and densities were arranged in this experiment, and the result of cluster analysis showed that all these treatments can be parted into four clusters according to LAI and LOV: varieties with erect leaves and low LAI (denoted as A), varieties with erect leaves and high LAI (denoted as B), varieties with horizontal leaves and low LAI (denoted as C), varieties with horizontal leaves and high LAI (denoted as D). Their CSR had difference in 400-700 nm and 700-1 150 nm at jointing stage, especially in different plant types. 3) There was obvious distribution difference among different clusters in scatter plot (X=ΔR890, Y=R890),ΔR890 was the reflectance increment from jointing to booting stage. It was seen from the Y-axis direction that R890 of horizontal varieties were higher than the erect ones, and seen from the X-axis direction that the greater ΔR890 was, the lower LAI one within the same plant type varieties, which indicted that the combination of plant-type and the population magnitude can be initially identified by this method.

  13. Estimating Canopy Nitrogen Concentration in Sugarcane Using Field Imaging Spectroscopy

    Directory of Open Access Journals (Sweden)

    Marc Souris

    2012-06-01

    Full Text Available The retrieval of nutrient concentration in sugarcane through hyperspectral remote sensing is widely known to be affected by canopy architecture. The goal of this research was to develop an estimation model that could explain the nitrogen variations in sugarcane with combined cultivars. Reflectance spectra were measured over the sugarcane canopy using a field spectroradiometer. The models were calibrated by a vegetation index and multiple linear regression. The original reflectance was transformed into a First-Derivative Spectrum (FDS and two absorption features. The results indicated that the sensitive spectral wavelengths for quantifying nitrogen content existed mainly in the visible, red edge and far near-infrared regions of the electromagnetic spectrum. Normalized Differential Index (NDI based on FDS(750/700 and Ratio Spectral Index (RVI based on FDS(724/700 are best suited for characterizing the nitrogen concentration. The modified estimation model, generated by the Stepwise Multiple Linear Regression (SMLR technique from FDS centered at 410, 426, 720, 754, and 1,216 nm, yielded the highest correlation coefficient value of 0.86 and Root Mean Square Error of the Estimate (RMSE value of 0.033%N (n = 90 with nitrogen concentration in sugarcane. The results of this research demonstrated that the estimation model developed by SMLR yielded a higher correlation coefficient with nitrogen content than the model computed by narrow vegetation indices. The strong correlation between measured and estimated nitrogen concentration indicated that the methods proposed in this study could be used for the reliable diagnosis of nitrogen quantity in sugarcane. Finally, the success of the field spectroscopy used for estimating the nutrient quality of sugarcane allowed an additional experiment using the polar orbiting hyperspectral data for the timely determination of crop nutrient status in rangelands without any requirement of prior

  14. Moderate water stress from regulated deficit irrigation decreases transpiration similarly to net carbon exchange in grapevine canopies

    Science.gov (United States)

    To determine the effects of timing and extent of regulated deficit irrigation (RDI) on grapevine (Vitis vinifera) canopies, whole-canopy transpiration (TrV) and canopy conductance to water vapor (gc) were calculated from whole-vine gas exchange near key stages of fruit development. The vines were ma...

  15. Heat and mass exchange within the Soil-Plant canopy-Atmosphere system: A theoretical approach and its validation.

    NARCIS (Netherlands)

    El-Kilani, R.M.M.

    1997-01-01

    Heat, mass and momentum transfer between the canopy air layer and the layer of air above has a very intermittent nature. This intermittent nature is due to the passage at the canopy top of coherent structures which have a length scale at least as large as the canopy height. The periodic passage of t

  16. Depreissia decipiens, an enigmatic canopy spider from Borneo revisited (Araneae, Salticidae), with remarks on the distribution and diversity of canopy spiders in Sabah, Borneo.

    Science.gov (United States)

    Deeleman-Reinhold, Christa L; Miller, Jeremy; Floren, Andreas

    2016-01-01

    Depreissia is a little known genus comprising two hymenopteran-mimicking species, one found in Central Africa and one in the north of Borneo. The male of Depreissia decipiens is redescribed, the female is described for the first time. The carapace is elongated, dorsally flattened and rhombus-shaped, the rear of the thorax laterally depressed and transformed, with a pair of deep pits; the pedicel is almost as long as the abdomen. The male palp is unusual, characterized by the transverse deeply split membranous tegulum separating a ventral part which bears a sclerotized tegular apophysis and a large dagger-like retrodirected median apophysis. The female epigyne consists of one pair of large adjacent spermathecae and very long copulatory ducts arising posteriorly and rising laterally alongside the spermathecae continuing in several vertical and horizontal coils over the anterior surface. Relationships within the Salticidae are discussed and an affinity with the Cocalodinae is suggested. Arguments are provided for a hypothesis that Depreissia decipiens is not ant-mimicking as was previously believed, but is a mimic of polistinine wasps. The species was found in the canopy in the Kinabalu area only, in primary and old secondary rainforest at 200-700 m.a.s.l. Overlap of canopy-dwelling spider species with those in the understorey are discussed and examples of species richness and endemism in the canopy are highlighted. Canopy fogging is a very efficient method of collecting for most arthropods. The canopy fauna adds an extra dimension to the known biodiversity of the tropical rainforest. In southeast Asia, canopy research has been neglected, inhibiting evaluation of comparative results of this canopy project with that from other regions. More use of fogging as a collecting method would greatly improve insight into the actual species richness and species distribution in general.

  17. Light-driven growth in Amazon evergreen forests explained by seasonal variations of vertical canopy structure.

    Science.gov (United States)

    Tang, Hao; Dubayah, Ralph

    2017-03-07

    Light-regime variability is an important limiting factor constraining tree growth in tropical forests. However, there is considerable debate about whether radiation-induced green-up during the dry season is real, or an apparent artifact of the remote-sensing techniques used to infer seasonal changes in canopy leaf area. Direct and widespread observations of vertical canopy structures that drive radiation regimes have been largely absent. Here we analyze seasonal dynamic patterns between the canopy and understory layers in Amazon evergreen forests using observations of vertical canopy structure from a spaceborne lidar. We discovered that net leaf flushing of the canopy layer mainly occurs in early dry season, and is followed by net abscission in late dry season that coincides with increasing leaf area of the understory layer. Our observations of understory development from lidar either weakly respond to or are not correlated to seasonal variations in precipitation or insolation, but are strongly related to the seasonal structural dynamics of the canopy layer. We hypothesize that understory growth is driven by increased light gaps caused by seasonal variations of the canopy. This light-regime variability that exists in both spatial and temporal domains can better reveal the drought-induced green-up phenomenon, which appears less obvious when treating the Amazon forests as a whole.

  18. Role of canopy interception on water and nutrient cycling in Chinese fir plantation ecosystem

    Institute of Scientific and Technical Information of China (English)

    KANG Wenxing; DENG Xiangwen; ZHAO Zhonghui

    2007-01-01

    The role of canopy interception on nutrient cycling in Chinese fir plantation ecosystem was studied on the basis of the position data during four years.Results indicate that the average canopy interception amount was 267.0 mm/year.Canopy interception play a significant role in water cycle and nutrient cycle processes in ecosystem,and was an important part of evaporation from the Chinese fir plantation ecosystem,being up to 27.2%.The evaporation from the canopy interception was an important way of water output from ecosystem,up to 19.9%.The flush-eluviation of branches and leaves caused by canopy interception brought nutrient input of 143.629 kg/(hm2·year),which was 117.2% of the input 63.924kg/(hm2·year)from the atmospheric precipitation.The decreased amount of 80.1 mm precipitation input caused by canopy interception reduced the amount of rainfall into the stand surface and infiltration into the soil,reduced the output with runoff and drainage,and decreased nutrient loss through output water.Therefore,the additional preserve of nutrient by canopy interception was 8.664 kg/(hm2·year).

  19. Measuring the response of canopy emissivity spectra to leaf area index variation using thermal hyperspectral data

    Science.gov (United States)

    Neinavaz, Elnaz; Darvishzadeh, Roshanak; Skidmore, Andrew K.; Groen, Thomas A.

    2016-12-01

    One of the plant biophysical factors affecting the canopy spectral reflectance of plants in the optical domain to receive research attention in recent decades is leaf area index (LAI). Although it is expected that the value of LAI affects the emission of radiation, it not known how. To our knowledge, the effect of LAI on plant canopy emissivity spectra has not yet been investigated in the thermal infrared region (TIR 8-14 μm). The overall aim of this study was to demonstrate the effect of LAI on canopy emissivity spectra of different species at the nadir position. The 279 spectral wavebands in the TIR domain were measured under controlled laboratory condition using a MIDAC spectrometer for four plant species. The corresponding LAI of each measurement was destructively calculated. We found a positive correlation between canopy emissivity spectra at various LAI values, indicating that emissivity increases concomitantly with LAI value. The canopy emissivity spectra of the four species were found to be statistically different at various wavebands even when the LAI values of the species were similar. It seems that other biophysical or biochemical factors also contribute to canopy emissivity spectra: this merits further investigation. We not only quantify the role of LAI on canopy emissivity spectra for the first time, but also demonstrate the potential of using hyperspectral thermal data to estimate LAI of plant species.

  20. Turbulence dependence on winds and stability in a weak-wind canopy sublayer over complex terrain

    Science.gov (United States)

    Russell, Eric S.; Liu, Heping; Gao, Zhongming; Lamb, Brian; Wagenbrenner, Natalie

    2016-10-01

    The daytime and nighttime turbulence profiles within a weak-wind forest canopy were investigated by using data collected within a temperate mixed conifer canopy in northern Idaho, USA. Turbulence measurements made at three heights on a single tower within a Douglas fir canopy were compared. Data were split between the daytime and nighttime to determine the relationships among the local temperature gradient, wind direction, wind speed, and turbulence levels. The total flow field distributions and vertical statistical profiles were determined for the overnight and daytime periods to observe how the overall flow changed with time of day. During the day, the wind probability distribution function was consistent between heights but depended on the canopy depth overnight. The skewness changed with the dominant wind direction. The kurtosis increased with depth into the canopy and from during the day to overnight. The range of wind speeds observed was higher under unstable conditions than stable conditions. Daytime turbulence had no dependence on wind direction. Overnight, the relationship between turbulence and wind speed changed with wind direction and canopy depth. The highest turbulence values were associated with downslope winds near the canopy top, but the wind direction for the highest turbulence was variable within the trunk space.

  1. [Canopy conductance characteristics of poplar in agroforestry system in west Liaoning Province of Northeast China].

    Science.gov (United States)

    Li, Zheng; Niu, Li-Hua; Yuan, Feng-Hui; Guan, De-Xin; Wang, An-Zhi; Jin, Chang-Jie; Wu, Jia-Bing

    2012-11-01

    By using Granier' s thermal dissipation probe, the sap flow of poplar in a poplar-maize agroforestry system in west Liaoning was continuously measured, and as well, the environmental factors such as air temperature, air humidity, net radiation, wind speed, soil temperature, and soil moisture content were synchronically measured. Based on the sap flow data, the canopy conductance of poplar was calculated with simplified Penman-Monteith equation. In the study area, the diurnal variation of poplar' s canopy conductance showed a "single peak" curve, whereas the seasonal variation showed a decreasing trend. There was a negative logarithm relationship between the canopy conductance and vapor pressure deficit, with the sensitivity of canopy conductance to vapor pressure deficit change decreased gradually from May to September. The canopy conductance had a positive relationship with solar radiation. In different months, the correlation degree of canopy conductance with environmental factors differed. The vapor pressure deficit in the whole growth period of poplar was the most significant environmental factor correlated with the canopy conductance.

  2. Ultrasonic and LIDAR sensors for electronic canopy characterization in vineyards: advances to improve pesticide application methods.

    Science.gov (United States)

    Llorens, Jordi; Gil, Emilio; Llop, Jordi; Escolà, Alexandre

    2011-01-01

    Canopy characterization is a key factor to improve pesticide application methods in tree crops and vineyards. Development of quick, easy and efficient methods to determine the fundamental parameters used to characterize canopy structure is thus an important need. In this research the use of ultrasonic and LIDAR sensors have been compared with the traditional manual and destructive canopy measurement procedure. For both methods the values of key parameters such as crop height, crop width, crop volume or leaf area have been compared. Obtained results indicate that an ultrasonic sensor is an appropriate tool to determine the average canopy characteristics, while a LIDAR sensor provides more accuracy and detailed information about the canopy. Good correlations have been obtained between crop volume (C(VU)) values measured with ultrasonic sensors and leaf area index, LAI (R(2) = 0.51). A good correlation has also been obtained between the canopy volume measured with ultrasonic and LIDAR sensors (R(2) = 0.52). Laser measurements of crop height (C(HL)) allow one to accurately predict the canopy volume. The proposed new technologies seems very appropriate as complementary tools to improve the efficiency of pesticide applications, although further improvements are still needed.

  3. Canopy carbon budget of Siebold's beech (Fagus crenata) sapling under free air ozone exposure.

    Science.gov (United States)

    Watanabe, Makoto; Hoshika, Yasutomo; Inada, Naoki; Koike, Takayoshi

    2014-01-01

    To determine the effects of ozone (O3) on the canopy carbon budget, we investigated photosynthesis and respiration of leaves of Siebold's beech saplings under free air O3 exposure (60 nmol mol(-1), during daytime) in relation to the within-canopy light gradient; we then calculated the canopy-level photosynthetic carbon gain (PCG) and respiratory carbon loss (RCL) using a canopy photosynthesis model. Susceptibilities of photosynthesis and respiration to O3 were greater in leaves of upper canopy than in the lower canopy. The canopy net carbon gain (NCG) was reduced by O3 by 12.4% during one growing season. The increased RCL was the main factor for the O3-induced reduction in NCG in late summer, while contributions of the reduced PCG and the increased RCL to the NCG were almost the same in autumn. These results indicate contributions of changes in PCG and RCL under O3 to NCG were different between seasons.

  4. Response of clonal plasticity of Fargesia nitida to different canopy conditions of subalpine coniferous forest

    Institute of Scientific and Technical Information of China (English)

    Jianping TAO; Lixia SONG; Yongjian WANG; Weiyin ZHANG

    2008-01-01

    The aim of this study is to explore the effects of canopy conditions on clump and culm numbers, and the morphological plasticity and biomass distribution patterns of the dwarf bamboo species Fargesia nitida. Specifically, we investigated the effects of canopy condi-tions on the growth and morphological characteristics of F. nitida, and the adaptive responses of F. nitida to dif-ferent canopy conditions and its ecological senses. The results indicate that forest canopy had a significant effect on the genet density and culm number per clump, while it did not affect the ramet density. Clumps tended to be few and large in gaps and forest edge plots, and small under forest understory plots. The ramets showed an even distribution under the closed canopy, and clus-ter distribution under gaps and forest edge plots. The forest canopy had a significant effect on both the ramets'biomass and biomass allocation. Favourable light conditions promoted ramet growth and biomass accumulation. Greater amounts of biomass in gaps and forest edge plots were shown by the higher number of culms per clump and the diameter of these culms. Under closed canopy, the bamboos increased their branching angle, leaf biomass allocation, specific leaf area and leaf area ratio to exploit more favourable light conditions in these locations. The spacer length, specific spacer length and spacer branching angles all showed significant differences between gaps and closed canopy conditions. The larger specific spacer length and spacer branching angle were beneficial for bamboo growth, scattering the ramets and exploiting more favourable light conditions. In summary, this study shows that to varying degrees, F nitida exhibits both a wide ecological amplitude and high degree of morphological plasticity in response to differing forest canopy conditions. More-over, the changes in plasticity enable the plants to optimize their light usage efficiency to promote growth and increase access to resources available in

  5. Photosynthesis-transpiration coupling model at canopy scale in terrestrial ecosystem

    Institute of Scientific and Technical Information of China (English)

    REN; Chuanyou; YU; Guirui; WANG; Qiufeng; GUAN; Dexin

    2005-01-01

    At the hypothesis of big leaf, an ecosystem photosynthesis-transpiration coupling cycle model was established by the scaled SMPT-SB model from single leaf to canopy, and model parameterization methods were discussed. Through simulating the canopy light distribution, canopy internal conductance to CO2 can be scaled from single leaf to canopy by integrating to canopy using the relationship between single internal conductance and photosynthetic photon flux density. Using the data observed by eddy covariance method from the Changbai Mountains site of ChinaFLUX, the application of the model at the canopy scale was examined. Under no water stress, the simulated net ecosystem photosynthesis rate fitted with the observed data very well, the slope and R2 of the line regression equation of the observed and simulated values were 0.7977 and 0.8892, respectively (n = 752), and average absolute error was 3.78 μmol CO2 m-2s-1; the slope, R2 and average absolute error of transpiration rate were 0.7314, 0.4355 and 1.60mmol H2O m-2 s-1, respectively (n = 752). The relationship between canopy photosynthesis,transpiration and external environmental conditions was discussed by treating the canopy as a whole and neglecting the comprehensive feedback mechanism within canopy, and it was noted that the precipitation course affected the transpiration rate simulation badly. Compared to the models based on eco-physiological processes, the SMPT-SB model was simple and easy to be used. And it can be used as a basic carbon and water coupling model of soil-plant-atmosphere continuum.

  6. Stochastic Transport Theory for Investigating the Three-Dimensional Canopy Structure from Space Measurements

    Science.gov (United States)

    Huang, Dong; Knyazikhin, Yuri; Wang, Weile; Deering, Donald W,; Stenberg, Pauline; Shabanov, Nikolay; Tan, Bin; Myneni, Ranga B.

    2008-01-01

    Radiation reflected from vegetation canopies exhibits high spatial variation. Satellite-borne sensors measure the mean intensities emanating from heterogeneous vegetated pixels. The theory of radiative transfer in stochastic media provides the most logical linkage between satellite observations and the three-dimensional canopy structure through a closed system of simple equations which contains the mean intensity and higher statistical moments directly as its unknowns. Although this theory has been a highly active research field in recent years, its potential for satellite remote sensing of vegetated surfaces has not been fully realized because of the lack of models of a canopy pair-correlation function that the stochastic radiative transfer equations require. The pair correlation function is defined as the probability of finding simultaneously phytoelements at two points. This paper presents analytical and Monte Carlo generated pair correlation functions. Theoretical and numerical analyses show that the spatial correlation between phytoelements is primarily responsible for the effects of the three-dimensional canopy structure on canopy reflective and absorptive properties. The pair correlation function, therefore, is the most natural and physically meaningful measure of the canopy structure over a wide range of scales. The stochastic radiative transfer equations naturally admit this measure and thus provide a powerful means to investigate the three-dimensional canopy structure from space. Canopy reflectances predicted by the stochastic equations are assessed by comparisons with the PARABOLA measurements from coniferous and broadleaf forest stands in the BOREAS Southern Study Areas. The pair correlation functions are derived from data on tree structural parameters collected during field campaigns conducted at these sites. The simulated canopy reflectances compare well with the PARABOLA data.

  7. The spatial scaling effect of continuous canopy Leaves Area Index retrieved by remote sensing

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Leave Area Index (LAI) is one of the most basic parameters to describe the geometric structure of plant canopies. It is also important input data for climatic model and interaction model between Earth surface and atmosphere, and some other things. The spatial scaling of retrieved LAI has been widely studied in recent years. Based on the new canopy reflectance model, the mechanism of the scaling effect of con- tinuous canopy Leaf Area Index is studied, and the scaling transform formula among different scales is found. Both the numerical simulation and the field validation show that the scale transform formula is reliable.

  8. [Distribution patterns of shoots, flowers and seeds in Ginkgo biloba canopy and their relationships].

    Science.gov (United States)

    Wang, J; Wei, G

    2000-04-01

    The distribution patterns of shoots, flowers and seeds in the canopy of 14 years old engrafted Ginkgo biloba and their relationships were investigated with stratification method. The result shows that long shoots, short shoots, bearing-shoots and flowers uniformly distributed in the central section of canopy. From the top to the bottom, the average age and the divaricating angle of long shoots increase 51.3% of the seeds distributed in 180-320 cm layer from the ground. The number of shoots, flowers and seeds in different canopy layers was closely correlated.

  9. Abundance of Green Tree Frogs and Insects in Artificial Canopy Gaps in a Bottomland Hardwood Forest.

    Energy Technology Data Exchange (ETDEWEB)

    Horn, Scott; Hanula, James, L.; Ulyshen, Michael D.; Kilgo, John, C.

    2005-04-01

    ABSTRACT - We found more green tree frogs ( Hyla cinerea) n canopv gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopv gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat Flies were the most commonlv collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

  10. The spatial scaling effect of continuous canopy Leaves Area Index retrieved by remote sensing

    Institute of Scientific and Technical Information of China (English)

    XU XiRu; FAN WenJie; TAO Xin

    2009-01-01

    Leave Area Index (LAI) is one of the most basic parameters to describe the geometric structure of plant canopies.It is also important input data for climatic model and interaction model between Earth surface and atmosphere,and some other things.The spatial scaling of retrieved LAI has been widely studied in recent years.Based on the new canopy reflectance model,the mechanism of the scaling effect of continuous canopy Leaf Area Index is studied,and the scaling transform formula among different scales is found.Both the numerical simulation and the field validation show that the scale transform formula is reliable.

  11. Regeneration in canopy gaps of tierra-firme forest in the Peruvian Amazon

    DEFF Research Database (Denmark)

    Karsten, Rune Juelsborg; Jovanovic, Milos; Meilby, Henrik;

    2013-01-01

    according to RIL guidelines. The size of each canopy gap was estimated by establishing a polygon that followed the vertical projection of the edge of the gap. Three circular plots of 100 m2 were established within each canopy gap. The center points of the plots were placed at the stump, mid-trunk and crown...... of the fallen tree. It appeared that the total abundance of seedlings did not differ significantly between logging gaps and natural canopy gaps. Instead the response to logging varied between species groups. The Clarisia sp. species group had a significant negative response to logging, while Ormosia sp., Aniba...

  12. Vegetation Canopy Structure from NASA EOS Multiangle Imaging

    Science.gov (United States)

    Chopping, M.; Martonchik, J. V.; Bull, M.; Rango, A.; Schaaf, C. B.; Zhao, F.; Wang, Z.

    2008-12-01

    We used red band bidirectional reflectance data from the NASA Multiangle Imaging SpectroRadiometer (MISR) and the MODerate resolution Imaging Spectroradiometer (MODIS) mapped onto a 250 m grid in a multiangle approach to obtain estimates of woody plant fractional cover and crown height through adjustment of the mean radius and mean crown aspect ratio parameters of an hybrid geometric-optical (GO) model. We used a technique to rapidly obtain MISR surface reflectance estimates at 275 m resolution through regression on 1 km MISR land surface estimates previously corrected for atmospheric attenuation using MISR aerosol estimates. MISR data were used to make end of dry season maps from 2000-2007 for parts of southern New Mexico, while MODIS data were used to replicate previous results obtained using MISR for June 2002 over large parts of New Mexico and Arizona. We also examined the applicability of this method in Alaskan tundra and forest by adjusting the GO model against MISR data for winter (March 2000) and summer (August 2008) scenes. We found that the GO model crown aspect ratio from MISR followed dominant shrub species distributions in the USDA, ARS Jornada Experimental Range, enabling differentiation of the more spherical crowns of creosotebush (Larrea tridentata) from the more prolate crowns of honey mesquite (Prosopis glandulosa). The measurement limits determined from 2000-2007 maps for a large part of southern New Mexico are ~0.1 in fractional shrub crown cover and ~3 m in mean canopy height (results obtained using data acquired shortly after precipitation events that radically darkened and altered the structure and angular response of the background). Typical standard deviations over the period for 12 sites covering a range of cover types are on the order of 0.05 in crown cover and 2 m in mean canopy height. We found that the GO model can be inverted to retrieve reasonable distributions of canopy parameters in southwestern environments using MODIS V005 red

  13. Plant science in forest canopies--the first 30 years of advances and challenges (1980-2010).

    Science.gov (United States)

    Lowman, Margaret D; Schowalter, Timothy D

    2012-04-01

    As an emerging subdiscipline of forest biology, canopy science has undergone a transition from observational, 'oh-wow' exploration to a more hypothesis-driven, experimental arena for rigorous field biology. Although efforts to explore forest canopies have occurred for a century, the new tools to access the treetops during the past 30 yr facilitated not only widespread exploration but also new discoveries about the complexity and global effects of this so-called 'eighth continent of the planet'. The forest canopy is the engine that fixes solar energy in carbohydrates to power interactions among forest components that, in turn, affect regional and global climate, biogeochemical cycling and ecosystem services. Climate change, biodiversity conservation, fresh water conservation, ecosystem productivity, and carbon sequestration represent important components of forest research that benefit from access to the canopy for rigorous study. Although some canopy variables can be observed or measured from the ground, vertical and horizontal variation in environmental conditions and processes within the canopy that determine canopy-atmosphere and canopy-forest floor interactions are best measured within the canopy. Canopy science has matured into a cutting-edge subset of forest research, and the treetops also serve as social and economic drivers for sustainable communities, fostering science education and ecotourism. This interdisciplinary context of forest canopy science has inspired innovative new approaches to environmental stewardship, involving diverse stakeholders.

  14. Up-scaling of water use efficiency from leaf to canopy as based on leaf gas exchange relationships and the modeled in-canopy light distribution

    DEFF Research Database (Denmark)

    Linderson, Maj-Lena; Mikkelsen, Teis Nørgaard; Ibrom, Andreas;

    2012-01-01

    on incoming PAR below 500 μmol m−2 s−1 is independent, both of the canopy levels and of variations in the environmental parameters. The average WUEnormleaf for PAR above 500 μmol m−2 s−1 was found to be 5.5 μmol CO2 (mmol H2O)−1 hPa and, for the full range, 2.3 μmol CO2 (mmol H2O)−1 hPa. These results showed...... that WUE can be up-scaled from leaf to canopy on the basis of WUEnormleaf and the PAR distribution within the canopy. The up-scaling conducted was based on this WUEnormleaf – PAR relationship, the lightdistribution being assessed using the MAESTRA model, parameterized in accordance with measurements...

  15. Evaluation of Forest Canopy and Understory Gap Fraction Derived from Terrestrial Laser Scanning

    Science.gov (United States)

    Chen, K. C.; Wang, C. K.

    2016-06-01

    The quantification of forest carbon sequestration is helpful to understand the carbon storage on the Earth. The estimation of forest carbon sequestration can be achieved by the use of leaf area index (LAI), which is derived from forest gap fraction. The hemispherical image-based technique is the most popular non-destructive means for obtaining such information. However, only the gap fraction of the top canopy is derived due to the limitation of imaging technique. The gap fraction information of understory is thus neglected. In this study, we evaluate the use of a terrestrial laser scanner (TLS) to obtain the forest canopy and understory gap fraction. The forest TLS data were manually classified as the top canopy and understory layers to facilitate the estimation of top canopy and understory gap fraction, respectively.

  16. 100-Meter Resolution Tree Canopy of the Conterminous United States - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for the conterminous United States, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree...

  17. Two-flow simulation of the natural light field within a canopy of submerged aquatic plants

    Science.gov (United States)

    Ackleson, S. G.; Klemas, V.

    1986-01-01

    A two-flow model is developed to simulate a light field composed of both collimated and diffuse irradiance within natural waters containing a canopy of bottom-adhering plants. To account for the effects of submerging a canopy, the transmittance and reflectance terms associated with each plant structure (leaves, stems, fruiting bodies, etc.) are expressed as functions of the ratio of the refractive index of the plant material to the refractive index of the surrounding media and the internal transmittance of the plant stucture. Algebraic solutions to the model are shown to yield plausible physical explanations for unanticipated variations in volume reflectance spectra. The effect of bottom reflectance on the near-bottom light field is also investigated. These indicate that within light-limited submerged aquatic plant canopies, substrate reflectance may play an important role in determining the amount of light available to the plants and, therefore, canopy productivity.

  18. A LiDAR method of canopy structure retrieval for wind modeling of heterogeneous forests

    DEFF Research Database (Denmark)

    Boudreault, Louis-Etienne; Bechmann, Andreas; Taryainen, Lasse

    2015-01-01

    The difficulty of obtaining accurate information about the canopy structure is a current limitation towards higher accuracy in numerical predictions of the wind field in forested terrain. The canopy structure in computational fluid dynamics is specified through the frontal area density and this i......The difficulty of obtaining accurate information about the canopy structure is a current limitation towards higher accuracy in numerical predictions of the wind field in forested terrain. The canopy structure in computational fluid dynamics is specified through the frontal area density...... and this information is required for each grid point in the three-dimensional computational domain. By using raw data from aerial LiDAR scans together with the Beer-Lambert law, we propose and test a method to calculate and grid highly variable and realistic frontal area density input. An extensive comparison...

  19. Canopy structure effects on the wind at a complex forested site

    DEFF Research Database (Denmark)

    Boudreault, Louis-Etienne; Bechmann, Andreas; Sørensen, Niels N.

    2014-01-01

    models. Previously difficult to estimate, this variable can now be easily recovered using aerial LiDAR scans. In this study, three approaches were tested which were all based on a novel method to extract the forest properties from the scans. A first approach used the fully spatial varying frontal area......We investigated the effect of the canopy description in a Reynolds-averaged Navier-Stokes method based on key flow results from a complex forested site. The canopy structure in RANS is represented trough the frontal area of canopy elements per unit volume, a variable required as input in canopy...... density. In a second approach, the vertical frontal area density variations were ignored, but the horizontally varying forest heights were kept represented. The third approach ignored any variations: the frontal area density was defined as a constant up to a fixed tree height over the whole domain...

  20. Remote sensing of temperature profiles in vegetation canopies using multiple view angles and inversion techniques

    Science.gov (United States)

    Kimes, D. S.

    1981-01-01

    A mathematical method is presented which allows the determination of vertical temperature profiles of vegetation canopies from multiple sensor view angles and some knowledge of the vegetation geometric structure. The technique was evaluated with data from several wheat canopies at different stages of development, and shown to be most useful in the separation of vegetation and substrate temperatures with greater accuracy in the case of intermediate and dense vegetation canopies than in sparse ones. The converse is true for substrate temperatures. Root-mean-square prediction accuracies of temperatures for intermediate-density wheat canopies were 1.8 C and 1.4 C for an exact and an overdeterminate system, respectively. The findings have implication for remote sensing research in agriculture, geology or other earth resources disciplines.

  1. Retrieval of canopy component temperatures through Bayesian inversion of directional thermal measurements

    NARCIS (Netherlands)

    Timmermans, J.; Verhoef, W.; Tol, van der C.; Su, Z.

    2009-01-01

    Evapotranspiration is usually estimated in remote sensing from single temperature value representing both soil and vegetation. This surface temperature is an aggregate over multiple canopy components. The temperature of the individual components can differ significantly, introducing errors in the ev

  2. A numerical study on impact of crop canopy on mesoscale climate

    Institute of Scientific and Technical Information of China (English)

    贾新媛; 叶卓佳

    1996-01-01

    The impact of well watered mesoscale wheat planted on the mesoscale boundary layer structures of midlatitude arid area has been investigated by using a mesoscale biophysical meteorological model. The investigation indicates that mesoscale perturbations in temperature and specific humidity over crop area from the adjacent dry, bare soil, caused by the transpiration from the crop canopy and evaporation from underlying humid soil, result in a horizontal pressure gradient. A mesoscale circulation is forced by the pressure perturbation with a wind speed of about 5 m/s directing from the crop canopy to the bare soil in the lower boundary layer. In the daytime, the boundary layer structure over a complex terrain is determined by the interactions between upslope flow circulations and the circulations mentioned above when wheat crop canopies are located on plain and plateau. The impact of crop canopy scale on this thermally forced mesoscale circulation is also investigated.

  3. A review of the roles of forest canopy gaps

    Institute of Scientific and Technical Information of China (English)

    Adele Muscolo; Silvio Bagnato; Maria Sidari; Roberto Mercurio

    2014-01-01

    Treefall gap, canopy opening caused by the death of one or more trees, is the dominant form of disturbance in many forest systems worldwide. Gaps play an important role in forest ecology helping to pre-serve bio-and pedo-diversity, influencing nutrient cycles, and maintain-ing the complex structure of the late-successional forests. Over the last 30 years, numerous reviews have been written describing gap dynamics. Here we synthesize current understanding on gap dynamics relating to tree regeneration with particular emphasis on gap characteristics consid-ered critical to develop ecologically sustainable forest management sys-tems and to conserve native biodiversity. Specifically, we addressed the question:how do gaps influence forest structure? From the literature re-viewed, the size of gaps induces important changes in factors such as light intensity, soil humidity and soil biological properties that influence tree species regeneration and differ in gaps of different sizes. Shade-tolerant species can colonize small gaps; shade-intolerant species need large gaps for successful regeneration. Additionally, gap dynamics differ between temperate, boreal, and tropical forests, showing the importance of climate differences in driving forest regeneration. This review summa-rizes information of use to forest managers who design cutting regimes that mimic natural disturbances and who must consider forest structure, forest climate, and the role of natural disturbance in their designs.

  4. Vegetation Biochemistry: What Can Imaging Spectrometry Tell Us About Canopies?

    Science.gov (United States)

    Goetz, Alexander F. H.; Gao, Bo-Cai; Wessman, Carol

    1991-01-01

    Changes in ecosystem processes such as productivity and decomposition may be expressed in the canopy foliar chemistry resulting from altered carbon allocation patterns, metabolic processes and nutrient availability. Understanding carbon balance on land over large regions requires quantitative determination of leaf constituents such as lignin and total nitrogen from remote sensing imaging systems. Results from spectral reflectance measurements of stacked leaves in the laboratory show that spectrum matching techniques are applicable to the derivation of the equivalent liquid water thickness in plants as well as to the extraction of dry leaf matter reflectance spectra from spectra of green leaves. The residual spectra derived by subtracting water spectra from the spectra of green leaves shows a feature at 1.72 micrometers that can be related to the lignin content of the leaves. Oak leaves have a deeper residual absorption feature than do cotton leaves which is consistent with their relative lignin content. Similar results are achieved when deriving the residuals from images taken over areas of grass and pine trees. Imaging spectrometry provides promise in developing images of various foliar biochemical constituents.

  5. A photosynthesis-based two-leaf canopy stomatal ...

    Science.gov (United States)

    A coupled photosynthesis-stomatal conductance model with single-layer sunlit and shaded leaf canopy scaling is implemented and evaluated in a diagnostic box model with the Pleim-Xiu land surface model (PX LSM) and ozone deposition model components taken directly from the meteorology and air quality modeling system—WRF/CMAQ (Weather Research and Forecast model and Community Multiscale Air Quality model). The photosynthesis-based model for PX LSM (PX PSN) is evaluated at a FLUXNET site for implementation against different parameterizations and the current PX LSM approach with a simple Jarvis function (PX Jarvis). Latent heat flux (LH) from PX PSN is further evaluated at five FLUXNET sites with different vegetation types and landscape characteristics. Simulated ozone deposition and flux from PX PSN are evaluated at one of the sites with ozone flux measurements. Overall, the PX PSN simulates LH as well as the PX Jarvis approach. The PX PSN, however, shows distinct advantages over the PX Jarvis approach for grassland that likely result from its treatment of C3 and C4 plants for CO2 assimilation. Simulations using Moderate Resolution Imaging Spectroradiometer (MODIS) leaf area index (LAI) rather than LAI measured at each site assess how the model would perform with grid averaged data used in WRF/CMAQ. MODIS LAI estimates degrade model performance at all sites but one site having exceptionally old and tall trees. Ozone deposition velocity and ozone flux along with LH

  6. Flocculent flows in the chromospheric canopy of a sunspot

    CERN Document Server

    Vissers, Gregal

    2012-01-01

    High-quality imaging spectroscopy in the H{\\alpha} line, obtained with the CRisp Imaging SpectroPolarimeter (CRISP) at the Swedish 1-m Solar Telescope (SST) at La Palma and covering a small sunspot and its surroundings, are studied. They exhibit ubiquitous flows both along fibrils making up the chromospheric canopy away from the spot and in the superpenumbra. We term these flows "flocculent" to describe their intermittent character, that is morphologically reminiscent of coronal rain. The flocculent flows are investigated further in order to determine their dynamic and morphological properties. For the measurement of their characteristic velocities, accelerations and sizes, we employ a new versatile analysis tool, the CRisp SPectral EXplorer (CRISPEX), which we describe in detail. Absolute velocities on the order of 7.2-82.4 km/s are found, with an average value of 36.5\\pm5.9 km/s and slightly higher typical velocities for features moving towards the sunspot than away. These velocities are much higher than th...

  7. Using Canopy Temperature to Infer Hydrologic Processes in Floodplain Forests

    Science.gov (United States)

    Lemon, M. G.; Allen, S. T.; Keim, R.; Edwards, B. L.; King, S. L.

    2015-12-01

    Decreased water availability due to hydrologic modifications, groundwater withdrawal, and climate change threaten the hydrological architecture of floodplain forests globally. The relative contributions of different sources of water (e.g., precipitation, surface flooding, and groundwater) to soil moisture on floodplains is poorly constrained, so identification of areas of water stress within a floodplain can provide valuable information about floodplain hydrology. Canopy temperature is a useful indicator of moisture stress and has long been used in agricultural and natural landscapes. Accordingly, thermal infrared (TIR) remote sensing data (spatial resolution of 1 km) from NASA's MODIS sensor was used to examine patterns of spatiotemporal variation in water stress in two floodplain forests over 12 growing seasons. On the upper Sabine River floodplain, Texas, increasing rainfall-derived soil moisture corresponded with increased heterogeneity of LST but there was weak association between river stage and heterogeneity. On the lower White River floodplain, Arkansas, distinct differences in LST between two reaches were observed during low flow years, while little relationship was observed between LST spatial variability and rainfall-derived soil moisture on either reach. The differences in hydrological control on these floodplain ecosystems have important ramifications for varying resilience to climate change and water resource management.

  8. Ecohydrological responses of dense canopies to environmental variability: 1. Interplay between vertical structure and photosynthetic pathway

    Science.gov (United States)

    Drewry, D. T.; Kumar, P.; Long, S.; Bernacchi, C.; Liang, X.-Z.; Sivapalan, M.

    2010-12-01

    Vegetation acclimation to changing climate, in particular elevated atmospheric concentrations of carbon dioxide (CO2), has been observed to include modifications to the biochemical and ecophysiological functioning of leaves and the structural components of the canopy. These responses have the potential to significantly modify plant carbon uptake and surface energy partitioning, and have been attributed with large-scale changes in surface hydrology over recent decades. While the aggregated effects of vegetation acclimation can be pronounced, they often result from subtle changes in canopy properties that require the resolution of physical, biochemical and ecophysiological processes through the canopy for accurate estimation. In this paper, the first of two, a multilayer canopy-soil-root system model developed to capture the emergent vegetation responses to environmental change is presented. The model incorporates both C3 and C4 photosynthetic pathways, and resolves the vertical radiation, thermal, and environmental regimes within the canopy. The tight coupling between leaf ecophysiological functioning and energy balance determines vegetation responses to climate states and perturbations, which are modulated by soil moisture states through the depth of the root system. The model is validated for three growing seasons each for soybean (C3) and maize (C4) using eddy-covariance fluxes of CO2, latent, and sensible heat collected at the Bondville (Illinois) Ameriflux tower site. The data set provides an opportunity to examine the role of important environmental drivers and model skill in capturing variability in canopy-atmosphere exchange. Vertical variation in radiative states and scalar fluxes over a mean diurnal cycle are examined to understand the role of canopy structure on the patterns of absorbed radiation and scalar flux magnitudes and the consequent differences in sunlit and shaded source/sink locations through the canopies. An analysis is made of the impact of

  9. Impact of Canopy Openness on Spider Communities: Implications for Conservation Management of Formerly Coppiced Oak Forests

    Science.gov (United States)

    Košulič, Ondřej; Michalko, Radek; Hula, Vladimír

    2016-01-01

    Traditional woodland management created a mosaic of differently aged patches providing favorable conditions for a variety of arthropods. After abandonment of historical ownership patterns and traditional management and the deliberate transformation to high forest after World War II, large forest areas became darker and more homogeneous. This had significant negative consequences for biodiversity. An important question is whether even small-scale habitat structures maintained by different levels of canopy openness in abandoned coppiced forest may constitute conditions suitable for forest as well as open habitat specialists. We investigated the effect of canopy openness in former traditionally coppiced woodlands on the species richness, functional diversity, activity density, conservation value, and degree of rareness of epigeic spiders. In each of the eight studied locations, 60-m-long transect was established consisting of five pitfall traps placed at regular 15 m intervals along the gradient. Spiders were collected from May to July 2012. We recorded 90 spider species, including high proportions of xeric specialists (40%) and red-listed threatened species (26%). The peaks of conservation indicators, as well as spider community abundance, were shifted toward more open canopies. On the other hand, functional diversity peaked at more closed canopies followed by a rapid decrease with increasing canopy openness. Species richness was highest in the middle of the canopy openness gradient, suggesting an ecotone effect. Ordinations revealed that species of conservation concern tended to be associated with sparse and partly opened canopy. The results show that the various components of biodiversity peaked at different levels of canopy openness. Therefore, the restoration and suitable forest management of such conditions will retain important diversification of habitats in formerly coppiced oak forest stands. We indicate that permanent presence of small-scale improvements

  10. A proposal for a new forest canopy interception mechanism: Splash droplet evaporation

    Science.gov (United States)

    Murakami, Shigeki

    2006-03-01

    Canopy interception was observed at a young stand of Chamaecyparis obtusa in a small Japanese experimental watershed for 2 years. Hourly canopy interception is linearly related to hourly rainfall on a rain event basis; this implies a dependence of the canopy interception on the rainfall intensity ( DOCIORI). The DOCIORI became stronger from spring to summer and declined from fall to winter. Though canopy interception has been treated as evaporation from wet canopy surfaces, this concept cannot be accountable for (1) the DOCIORI and (2) the efficient canopy interception mechanism, as about 10-40% of the rainfall evaporates during rain events under high humidity conditions. A new concept is proposed to explain these contradictions: numerous small droplets are produced by splashes when a raindrop hits a canopy and they evaporate. It is well known that the specific number and the average size of raindrops increases with rainfall intensity, and, as a result, so do the number of small droplets produced by splashes and evaporation. This splash mechanism can explain both the DOCIORI and the efficient canopy interception mechanism based on simulations. A droplet of 25 μm in radius falling at its terminal velocity under a relative humidity of 95% evaporates and disappears after 1.7-2.8 m of fall distance, depending on the ambient temperature (15-25 °C), while one of 50 μm loses 20-32% of its original mass after 8 m of fall distance. However, a droplet of 100 μm in radius loses only 2-4% of its original mass with an 8 m fall distance. Seasonal changes in the DOCIORI are also partly explainable by the splash mechanism.

  11. Simulating Spatial Distribution of Canopy Rainfall Interception of Forests in China

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The canopy rainfall interception modei linked to environmental conditions and biological features is established on the basis of stationary observation and measurements in China. Upscaling from site observation to regional Ievel estimation of canopy rainfall interception has been made. The potential interception value of forests during the rainfall season in China according to rainfall records of May, July and September in the year 1982, has been simulated and mapped under the GIS software package Idris...

  12. Impact of Canopy Openness on Spider Communities: Implications for Conservation Management of Formerly Coppiced Oak Forests.

    Science.gov (United States)

    Košulič, Ondřej; Michalko, Radek; Hula, Vladimír

    2016-01-01

    Traditional woodland management created a mosaic of differently aged patches providing favorable conditions for a variety of arthropods. After abandonment of historical ownership patterns and traditional management and the deliberate transformation to high forest after World War II, large forest areas became darker and more homogeneous. This had significant negative consequences for biodiversity. An important question is whether even small-scale habitat structures maintained by different levels of canopy openness in abandoned coppiced forest may constitute conditions suitable for forest as well as open habitat specialists. We investigated the effect of canopy openness in former traditionally coppiced woodlands on the species richness, functional diversity, activity density, conservation value, and degree of rareness of epigeic spiders. In each of the eight studied locations, 60-m-long transect was established consisting of five pitfall traps placed at regular 15 m intervals along the gradient. Spiders were collected from May to July 2012. We recorded 90 spider species, including high proportions of xeric specialists (40%) and red-listed threatened species (26%). The peaks of conservation indicators, as well as spider community abundance, were shifted toward more open canopies. On the other hand, functional diversity peaked at more closed canopies followed by a rapid decrease with increasing canopy openness. Species richness was highest in the middle of the canopy openness gradient, suggesting an ecotone effect. Ordinations revealed that species of conservation concern tended to be associated with sparse and partly opened canopy. The results show that the various components of biodiversity peaked at different levels of canopy openness. Therefore, the restoration and suitable forest management of such conditions will retain important diversification of habitats in formerly coppiced oak forest stands. We indicate that permanent presence of small-scale improvements

  13. Estimating the Instantaneous Drag-Wind Relationship for a Horizontally Homogeneous Canopy

    Science.gov (United States)

    Pan, Ying; Chamecki, Marcelo; Nepf, Heidi M.

    2016-07-01

    The mean drag-wind relationship is usually investigated assuming that field data are representative of spatially-averaged metrics of statistically stationary flow within and above a horizontally homogeneous canopy. Even if these conditions are satisfied, large-eddy simulation (LES) data suggest two major issues in the analysis of observational data. Firstly, the streamwise mean pressure gradient is usually neglected in the analysis of data from terrestrial canopies, which compromises the estimates of mean canopy drag and provides misleading information for the dependence of local mean drag coefficients on local velocity scales. Secondly, no standard approach has been proposed to investigate the instantaneous drag-wind relationship, a critical component of canopy representation in LES. Here, a practical approach is proposed to fit the streamwise mean pressure gradient using observed profiles of the mean vertical momentum flux within the canopy. Inclusion of the fitted mean pressure gradient enables reliable estimates of the mean drag-wind relationship. LES data show that a local mean drag coefficient that characterizes the relationship between mean canopy drag and the velocity scale associated with total kinetic energy can be used to identify the dependence of the local instantaneous drag coefficient on instantaneous velocity. Iterative approaches are proposed to fit specific models of velocity-dependent instantaneous drag coefficients that represent the effects of viscous drag and the reconfiguration of flexible canopy elements. LES data are used to verify the assumptions and algorithms employed by these new approaches. The relationship between mean canopy drag and mean velocity, which is needed in models based on the Reynolds-averaged Navier-Stokes equations, is parametrized to account for both the dependence on velocity and the contribution from velocity variances. Finally, velocity-dependent drag coefficients lead to significant variations of the calculated

  14. Modeling photosynthesis of discontinuous plant canopies by linking Geometric Optical Radiative Transfer model with biochemical processes

    Directory of Open Access Journals (Sweden)

    Q. Xin

    2015-02-01

    Full Text Available Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily time scales. We also demonstrate that the ambient CO2 concentration influences daytime vegetation photosynthesis, which needs to be considered in state-of-the-art biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  15. Canopy Spectral Invariants. Part 2; Application to Classification of Forest Types from Hyperspectral Data

    Science.gov (United States)

    Schull, M. A.; Knyazikhin, Y.; Xu, L.; Samanta, A.; Carmona, P. L.; Lepine, L.; Jenkins, J. P.; Ganguly, S.; Myneni, R. B.

    2011-01-01

    Many studies have been conducted to demonstrate the ability of hyperspectral data to discriminate plant dominant species. Most of them have employed the use of empirically based techniques, which are site specific, requires some initial training based on characteristics of known leaf and/or canopy spectra and therefore may not be extendable to operational use or adapted to changing or unknown land cover. In this paper we propose a physically based approach for separation of dominant forest type using hyperspectral data. The radiative transfer theory of canopy spectral invariants underlies the approach, which facilitates parameterization of the canopy reflectance in terms of the leaf spectral scattering and two spectrally invariant and structurally varying variables - recollision and directional escape probabilities. The methodology is based on the idea of retrieving spectrally invariant parameters from hyperspectral data first, and then relating their values to structural characteristics of three-dimensional canopy structure. Theoretical and empirical analyses of ground and airborne data acquired by Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over two sites in New England, USA, suggest that the canopy spectral invariants convey information about canopy structure at both the macro- and micro-scales. The total escape probability (one minus recollision probability) varies as a power function with the exponent related to the number of nested hierarchical levels present in the pixel. Its base is a geometrical mean of the local total escape probabilities and accounts for the cumulative effect of canopy structure over a wide range of scales. The ratio of the directional to the total escape probability becomes independent of the number of hierarchical levels and is a function of the canopy structure at the macro-scale such as tree spatial distribution, crown shape and size, within-crown foliage density and ground cover. These properties allow for the natural

  16. LEAF MICROMORPHOMETRY OF Schinus molle L. (ANARCADIACEAE IN DIFFERENT CANOPY HEIGHTS.

    Directory of Open Access Journals (Sweden)

    Marinês Ferreira Pires

    2015-03-01

    Full Text Available Leaf characterization of trees is essential for its identification and use, as well as to understand its relationships with environment. The objective of this work is to study the leaflet anatomy and leaf biometrical characteristics at different canopy heights of Schinus molle plants as a function of its environmental and physiological modifications. Leaves were collected at three different canopy heights: base, middle and upper canopy in a plantation of S. molle. Leaves were used for anatomical and biometrical analysis. For the anatomical analysis, leaves were fixed in FAA and stored in ethanol 70% and further submitted to transversal and paradermical sections. Slides were photomicrographed and image analysis was performed in UTHSCSA-Imagetool. For biometrical analysis leaf area, length, width, dry mass and specific leaf area were evaluated. The leaflets exhibited single layer epidermis, anomocytic and ciclocytic stomata, isobilateral mesophyll, subepidermal parenchyma layer in both adaxial and abaxial faces of epidermis, secretory vessels and lamellar collenchyma in midrib and leaf border. Leaf anatomy modifications occurred in cuticle and mesophyll thickness, vascular system, phloem thickness, and stomatal density in accordance with leaf canopy position. Leaves were smaller and with reduced leaf area at higher canopy positions. S. molle leaf anatomy is different from other species within Schinus genre with modifications under different environmental and physiological modifications promoted by its canopy height.

  17. Canopy Density Mapping on Ultracam-D Aerial Imagery in Zagros Woodlands, Iran

    Science.gov (United States)

    Erfanifard, Y.; Khodaee, Z.

    2013-09-01

    Canopy density maps express different characteristics of forest stands, especially in woodlands. Obtaining such maps by field measurements is so expensive and time-consuming. It seems necessary to find suitable techniques to produce these maps to be used in sustainable management of woodland ecosystems. In this research, a robust procedure was suggested to obtain these maps by very high spatial resolution aerial imagery. It was aimed to produce canopy density maps by UltraCam-D aerial imagery, newly taken in Zagros woodlands by Iran National Geographic Organization (NGO), in this study. A 30 ha plot of Persian oak (Quercus persica) coppice trees was selected in Zagros woodlands, Iran. The very high spatial resolution aerial imagery of the plot purchased from NGO, was classified by kNN technique and the tree crowns were extracted precisely. The canopy density was determined in each cell of different meshes with different sizes overlaid on the study area map. The accuracy of the final maps was investigated by the ground truth obtained by complete field measurements. The results showed that the proposed method of obtaining canopy density maps was efficient enough in the study area. The final canopy density map obtained by a mesh with 30 Ar (3000 m2) cell size had 80% overall accuracy and 0.61 KHAT coefficient of agreement which shows a great agreement with the observed samples. This method can also be tested in other case studies to reveal its capability in canopy density map production in woodlands.

  18. The estimation of canopy attributes from digital cover photography by two different image analysis methods

    Directory of Open Access Journals (Sweden)

    Chianucci F

    2014-08-01

    Full Text Available Proximal sensing methods using digital photography have gained wide acceptance for describing and quantifying canopy properties. Digital hemispherical photography (DHP is the most widely used photographic technique for canopy description. However, the main drawbacks of DHP have been the tedious and time-consuming image processing required and the sensitivity of the results to the image analysis methods. Recently, an alternative approach using vertical photography has been proposed, namely, digital cover photography (DCP. The method captures detailed vertical canopy gaps and performs canopy analysis by dividing gap fractions into large between-crown gaps and small within- crown gaps. Although DCP is a rapid, simple and readily available method, the processing steps involved in gap fraction analysis have a large subjective component by default. In this contribution, we propose an alternative simple, more objective and easily implemented procedure to perform gap fraction analysis of DCP images. We compared the performance of the two image analysis methods in dense deciduous forests. Leaf area index (LAI estimates from the two image analysis methods were compared with reference LAI measurements obtained through the use of litter traps to measure leaf fall. Both methods provided accurate estimates of the total gap fraction and, thus, accurate estimates of the LAI. The new proposed procedure is recommended for dense canopies because the subjective classification of large gaps is most error-prone in stands with dense canopy cover.

  19. Coupling Fine-Scale Root and Canopy Structure Using Ground-Based Remote Sensing

    Directory of Open Access Journals (Sweden)

    Brady S. Hardiman

    2017-02-01

    Full Text Available Ecosystem physical structure, defined by the quantity and spatial distribution of biomass, influences a range of ecosystem functions. Remote sensing tools permit the non-destructive characterization of canopy and root features, potentially providing opportunities to link above- and belowground structure at fine spatial resolution in functionally meaningful ways. To test this possibility, we employed ground-based portable canopy LiDAR (PCL and ground penetrating radar (GPR along co-located transects in forested sites spanning multiple stages of ecosystem development and, consequently, of structural complexity. We examined canopy and root structural data for coherence (i.e., correlation in the frequency of spatial variation at multiple spatial scales ≤10 m within each site using wavelet analysis. Forest sites varied substantially in vertical canopy and root structure, with leaf area index and root mass more becoming even vertically as forests aged. In all sites, above- and belowground structure, characterized as mean maximum canopy height and root mass, exhibited significant coherence at a scale of 3.5–4 m, and results suggest that the scale of coherence may increase with stand age. Our findings demonstrate that canopy and root structure are linked at characteristic spatial scales, which provides the basis to optimize scales of observation. Our study highlights the potential, and limitations, for fusing LiDAR and radar technologies to quantitatively couple above- and belowground ecosystem structure.

  20. Stable Isotopes Indicate Within-Canopy Processes During Interception of Rainfall

    Science.gov (United States)

    Allen, S. T.; Keim, R.; Barnard, H. R.; Brooks, J. R.; McDonnell, J.

    2015-12-01

    Stable isotopes of water have been used to gain process-level understand of mixing, storage, and transport in all components of the hydrological cycle. Canopy interception processes remain some of the least understood because of the relatively small storage pool, rapid turnover, and variability at short intervals relative to, for example, soils. Stable isotopes provide a look into the 'black box' of canopy processes that control interception storage and throughfall generation. Several recent studies have compared throughfall isotopic composition to open rainfall; canopy effects vary in direction and magnitude but are ubiquitous. We present findings from three studies using isotopes of throughfall. In all cases, common patterns and persistence of patterns in variability of throughfall amount (e.g., correlation with canopy characteristics, correlations with precipitation characteristics, and geostatistical relationships) were infrequently apparent for isotopic composition. Data consistently support the so called 'selection' effect, that throughfall composition is a product of spatially and temporally varying transmission of rainfall that has temporally varying isotopic composition. There is little evidence of isotopic fractionation by wet-canopy evaporation. Additionally, isotopic composition of storm-total throughfall is generally less variable than is amount or solute content, suggesting two possibilities: (1) high spatial homogeneity in the selection effect, or (2) rapid exchange and equilibration of droplets with vapor in the canopy airspace, lending support to the hypothesized role of splash droplet evaporation. These results suggest a need to re-examine conceptual models of the progression from interception to evaporation and throughfall generation.

  1. Simulating canopy stomatal conductance of winter wheat and its distribution using remote sensing information

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The canopy stomatal movement, a plant physiological process, generally occurs within leaves but its influence on exchange of CO2, water vapor, and sensible heat fluxes between atmosphere and terrestrial ecosystem. Many studies have documentedthat the interaction between leaf photosynthesis and canopy stomatal conductance is obvious. Thus, information on stomatal conductance is valuable in climate and ecosystem models. In curren study, a newly developed model was adopted to calculate canopy stomatal conductance of winter wheat in Huang-Huai-Hai (H-H-H) Plain of China (31.5-42.7, 110.0-123.0). The remote sensing information from NOAA-AVHRR and meteorological observed data were used to estimate regional scale stomatal conductance distribution. Canopy stomatal conductance distribution pattern of winter wheat onMarch 18, 1997 was also presented. The developed canopy stomatalconductance model might be used to estimate canopy stomatal conductance in land surface schemes and seems can be acted as a boundary condition in regional climatic model runs.

  2. Canopy induced aberration correction in airborne electro-optical imaging systems

    Science.gov (United States)

    Harder, James A.; Sprague, Michaelene W.

    2011-11-01

    An increasing number of electro-optical systems are being used by pilots in tactical aircraft. This means that the afore mentioned systems must operate through the aircrafts canopy, unfortunately the canopy functions as a less than ideal lens element in the electro-optical sensor optical path. The canopy serves first and foremost as an aircraft structural component, considerations like minimizing the drag co-efficient and the ability to survive bird strikes take precedence over achieving optimal optical characteristics. This paper describes how the authors characterized the optical characteristics of an aircraft canopy. Families of modulation transfer functions were generated, for various viewing geometries through the canopy and for various electro-optical system entrance pupil diameters. These functions provided us with the means to significantly reduce the effect of the canopy "lens" on the performance of a representative electro-optical system, using an Astigmatic Corrector Lens. A comparison of the electro-optical system performance with and without correction is also presented.

  3. Implementation of spaceborne lidar-retrieved canopy height in the WRF model

    Science.gov (United States)

    Lee, Junhong; Hong, Jinkyu

    2016-06-01

    Canopy height is closely related to biomass and aerodynamic properties, which regulate turbulent transfer of energy and mass at the soil-vegetation-atmosphere continuum. However, this key information has been prescribed as a constant value in a fixed plant functional type in atmospheric models. This paper is the first to report impacts of using realistic forest canopy height, retrieved from spaceborne lidar, on regional climate simulation by using the canopy height data in the Weather Research and Forecasting (WRF) model's land surface model. Numerical simulations were conducted over the Amazon Basin during summer season. Over this region, the lidar-retrieved canopy heights were higher than the default values used in the WRF, which are dependent only on plant functional type. By modifying roughness length and zero-plane displacement height, the change of canopy height resulted in changes in surface energy balance by regulating aerodynamic conductances and vertical temperature gradient, thus modifying the lifting condensation level and equivalent potential temperature in the atmospheric boundary layer. Our analysis also showed that the WRF model better reproduced the observed precipitation when lidar-retrieved canopy height was used over the Amazon Basin.

  4. CAN Canopy Addition of Nitrogen Better Illustrate the Effect of Atmospheric Nitrogen Deposition on Forest Ecosystem?

    Science.gov (United States)

    Zhang, Wei; Shen, Weijun; Zhu, Shidan; Wan, Shiqiang; Luo, Yiqi; Yan, Junhua; Wang, Keya; Liu, Lei; Dai, Huitang; Li, Peixue; Dai, Keyuan; Zhang, Weixin; Liu, Zhanfeng; Wang, Faming; Kuang, Yuanwen; Li, Zhian; Lin, Yongbiao; Rao, Xingquan; Li, Jiong; Zou, Bi; Cai, Xian; Mo, Jiangming; Zhao, Ping; Ye, Qing; Huang, Jianguo; Fu, Shenglei

    2015-06-01

    Increasing atmospheric nitrogen (N) deposition could profoundly impact community structure and ecosystem functions in forests. However, conventional experiments with understory addition of N (UAN) largely neglect canopy-associated biota and processes and therefore may not realistically simulate atmospheric N deposition to generate reliable impacts on forest ecosystems. Here we, for the first time, designed a novel experiment with canopy addition of N (CAN) vs. UAN and reviewed the merits and pitfalls of the two approaches. The following hypotheses will be tested: i) UAN overestimates the N addition effects on understory and soil processes but underestimates those on canopy-associated biota and processes, ii) with low-level N addition, CAN favors canopy tree species and canopy-dwelling biota and promotes the detritus food web, and iii) with high-level N addition, CAN suppresses canopy tree species and other biota and favors rhizosphere food web. As a long-term comprehensive program, this experiment will provide opportunities for multidisciplinary collaborations, including biogeochemistry, microbiology, zoology, and plant science to examine forest ecosystem responses to atmospheric N deposition.

  5. Diffuse sky radiation influences the relationship between canopy PRI and shadow fraction

    Science.gov (United States)

    Mõttus, Matti; Takala, Tuure L. H.; Stenberg, Pauline; Knyazikhin, Yuri; Yang, Bin; Nilson, Tiit

    2015-07-01

    The Photochemical Reflectance Index (PRI) of green leaves is an indicator of photosynthetic downregulation: when the photosynthetic apparatus is close to the saturation limit, PRI becomes dependent on light conditions. Therefore, by measuring the PRI of leaves under different local irradiance conditions, it should be possible to determine the saturation level of the leaves and obtain information on the light use efficiency (LUE) of a vegetation canopy. The dependence of PRI on the ratio of sunlit to shaded foliage (quantified by the canopy shadow fraction) in the field of view of an instrument has been used to remotely measure canopy LUE on clear days. However, besides photosynthetic downregulation, the dependence of canopy PRI on shadow fraction is affected by the blue sky radiation caused by scattering in the atmosphere. To quantify this effect on remotely sensed PRI, we present the underlying definitions relating leaf and canopy PRI and perform the required calculations for typical midsummer conditions in Central Finland. We demonstrate that the effect of blue sky radiation on the variation of PRI with canopy shadow fraction is similar in shape and magnitude to that of LUE variations reported in literature.

  6. Sunscreening fungal pigments influence the vertical gradient of pendulous lichens in boreal forest canopies.

    Science.gov (United States)

    Färber, Leonie; Sølhaug, Knut Asbjorn; Esseen, Per-Anders; Bilger, Wolfgang; Gauslaa, Yngvar

    2014-06-01

    Pendulous lichens dominate canopies of boreal forests, with dark Bryoria species in the upper canopy vs. light Alectoria and Usnea species in lower canopy. These genera offer important ecosystem services such as winter forage for reindeer and caribou. The mechanism behind this niche separation is poorly understood. We tested the hypothesis that species-specific sunscreening fungal pigments protect underlying symbiotic algae differently against high light, and thus shape the vertical canopy gradient of epiphytes. Three pale species with the reflecting pigment usnic acid (Alectoria sarmentosa, Usnea dasypoga, U. longissima) and three with dark, absorbing melanins (Bryoria capillaris, B. fremontii, B. fuscescens) were compared. We subjected the lichens to desiccation stress with and without light, and assessed their performance with chlorophyll fluorescence. Desiccation alone only affected U. longissima. By contrast, light in combination with desiccation caused photoinhibitory damage in all species. Usnic lichens were significantly more susceptible to light during desiccation than melanic ones. Thus, melanin is a more efficient light-screening pigment than usnic acid. Thereby, the vertical gradient of pendulous lichens in forest canopies is consistent with a shift in type and functioning of sunscreening pigments, from high-light-tolerant Bryoria in the upper to susceptible Alectoria and Usnea in the lower canopy.

  7. Soil types and forest canopy structures in southern Missouri: A first look with AIS data

    Science.gov (United States)

    Green, G. M.; Arvidson, R. E.

    1986-01-01

    Spectral reflectance properties of deciduous oak-hickory forests covering the eastern half of the Rolla Quadrangle were examined using Thematic Mapper (TM) data acquired in August and December, 1982 and Airborne Imaging Spectrometer (AIS) data acquired in August, 1985. For the TM data distinctly high relative reflectance values (greater than 0.3) in the near infrared (Band 4, 0.73 to 0.94 micrometers) correspond to regions characterized by xeric (dry) forests that overlie soils with low water retention capacities. These soils are derived primarily from rhyolites. More mesic forests characterized by lower TM band 4 relative reflectances are associated with soils of higher retention capacities derived predominately from non-cherty carbonates. The major factors affecting canopy reflectance appear to be the leaf area index (LAI) and leaf optical properties. The Suits canopy reflectance model predicts the relative reflectance values for the xeric canopies. The mesic canopy reflectance is less well matched and incorporation of canopy shadowing caused by the irregular nature of the mesic canopy may be necessary. Preliminary examination of high spectral resolution AIS data acquired in August of 1985 reveals no more information than found in the broad band TM data.

  8. Habitat use by the endangered Karner blue butterfly in oak woodlands: The influence of canopy cover

    Science.gov (United States)

    Grundel, Ralph; Pavlovic, Noel B.; Sulzman, Christina L.

    1998-01-01

    The Karner blue butterfly Lycaeides melissa samuelis is an endangered species residing in the Great Lakes and northeastern regions of the United States. Increased canopy cover is a major factor implicated in the decline of the Karner blue at many locales. Therefore, we examined how the butterfly's behavior varied with canopy cover. Adult males at Indiana Dunes National Lakeshore used habitat under canopy openings for nearly 90% of their activities; females used openings and shaded areas more equally. The frequency of oviposition on the sole host plant, wild lupine Lupinus perennis, was highest under 30–60% canopy cover even though lupine was more abundant in more open areas. Larvae fed preferentially on larger lupine plants and on lupines in denser patches. However, lupines were generally larger in the shade. Therefore, shade-related trade-offs existed between lupine abundance and distribution of larval feeding and oviposition. Also, heterogeneity of shading by sub-canopy woody vegetation was greater at oviposition sites than at sites where lupine did not grow. Given the importance of shade heterogeneity, a mixture of canopy openings and shade, on a scale similar to daily adult movement range, should be beneficial for this butterfly.

  9. Urbanization Impacts on Tree Canopies: The Unexplored Link Between Canopy Epiphytes and Pacific Northwest Forest Biogeochemical Cycles

    Science.gov (United States)

    Prather, H.; Rosenstiel, T. N.

    2014-12-01

    Canopy-dwelling cryptogamic plants (i.e. lichens and mosses) serve important roles in biogeochemical cycles worldwide and are of particular importance to biogeochemical cycling in Pacific Northwest forests. Epiphytic lichens and mosses respond sensitively to both direct and indirect effects of global change, as evidenced by distinct changes in epiphyte community structure. Yet, few studies have explored how shifting epiphytic communities, resulting from changing climate and increasing air pollutant exposure, may greatly impact biogeochemical cycles of the forests they inhabit. We present the first study investigating how urbanization, as a proxy for global change, impacts epiphytic community structure and functional biodiversity and address the impending effects on Pacific Northwest forest biogeochemical cycles. We discuss the results of paired ground and arboreal epiphyte surveys across an urban to rural gradient in Portland, Oregon. Three research sites with varying distance (0km, 74km, and 109km) from urban center were surveyed and epiphytic biodiversity was described. Pronounced shifts in epiphyte community structure were observed downwind of the Portland metro region. These results suggest that the impacts of urbanization may have significant and surprisingly far-reaching impacts on forested ecosystems in the Pacific Northwest. The impacts of an altered ground and arboreal epiphytic community on Pacific Northwest forest biogeochemical processes will be discussed.

  10. Canopy Level Solar Induced Fluorescence for Vegetation in Controlled Experiments

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Campbell, P. K. Entcheva

    2007-01-01

    Solar induced chlorophyll fluorescence (SIF) was retrieved from high resolution reflectance spectra acquired one meter above saplings of three deciduous tree species during springtime (three weeks after leaf flush) and in late summer when foliage was mature. SIF was determined by application of the Fraunhofer Line Depth (FLD) Principal to above-canopy spectra acquired with an Analytical Spectral Devices (ASD) Fieldspec spectroradiometer (3.2 nm resolution with 1.2 nm sampling interval). SIF retrievals were made at the two atmospheric oxygen (O2) absorption features that occur in the chlorophyll fluorescence (ChlF) region (660 -780 nm). These telluric features are 02V, the broader and deeper feature centered at 760 nm, but located on the shoulder of the far-red ChlF peak at 740 nm; and 023, a narrow feature centered at 688 nm that is positioned near the red ChlF peak at 685 nm. Supporting, coincident leaf level fluorescence, reflectance, photochemical and other measurements were also made. At the leaf level, these measurements included in situ photosynthetic capacity (Pmax) and light adapted total chlorophyll fluorescence (Fs') collected at steady state under high light and controlled chamber conditions (e.g., temperature, PAR, humidity, and COz); optical properties (reflectance, transmittance, absorptance); chlorophyll and carotenoid content; specific leaf mass; carbon (C) and nitrogen (N) content; fluorescence emission spectra at multiple excitation wavelengths; the ChlF contribution to red (R) and far-red (FR) reflectance; fluorescence imagery; and fluorescence excitation-emission matrices (EEMs). The tree species examined were tulip poplar (Liriodendron tulipifera L.), red maple (Acer rubrum L.), and sweetgum (Liquidambar styraczflua L.), and each had been provided four levels of N augmentation (0, 19, 37, and 75 kg Nhectare seasonally) to simulate atmospheric deposition from air pollution. Whole-plant SIF measurements of these species were compared with SIF

  11. Vegetation Indices for Mapping Canopy Foliar Nitrogen in a Mixed Temperate Forest

    Directory of Open Access Journals (Sweden)

    Zhihui Wang

    2016-06-01

    Full Text Available Hyperspectral remote sensing serves as an effective tool for estimating foliar nitrogen using a variety of techniques. Vegetation indices (VIs are a simple means of retrieving foliar nitrogen. Despite their popularity, few studies have been conducted to examine the utility of VIs for mapping canopy foliar nitrogen in a mixed forest context. In this study, we assessed the performance of 32 vegetation indices derived from HySpex airborne hyperspectral images for estimating canopy mass-based foliar nitrogen concentration (%N in the Bavarian Forest National Park. The partial least squares regression (PLSR was performed for comparison. These vegetation indices were classified into three categories that are mostly correlated to nitrogen, chlorophyll, and structural properties such as leaf area index (LAI. %N was destructively measured in 26 broadleaf, needle leaf, and mixed stand plots to represent the different species and canopy structure. The canopy foliar %N is defined as the plot-level mean foliar %N of all species weighted by species canopy foliar mass fraction. Our results showed that the variance of canopy foliar %N is mainly explained by functional type and species composition. The normalized difference nitrogen index (NDNI produced the most accurate estimation of %N (R2CV = 0.79, RMSECV = 0.26. A comparable estimation of %N was obtained by the chlorophyll index Boochs2 (R2CV = 0.76, RMSECV = 0.27. In addition, the mean NIR reflectance (800–850 nm, representing canopy structural properties, also achieved a good accuracy in %N estimation (R2CV = 0.73, RMSECV = 0.30. The PLSR model provided a less accurate estimation of %N (R2CV = 0.69, RMSECV = 0.32. We argue that the good performance of all three categories of vegetation indices in %N estimation can be attributed to the synergy among plant traits (i.e., canopy structure, leaf chemical and optical properties while these traits may converge across plant species for evolutionary reasons. Our

  12. Modeling canopy-level productivity: is the "big-leaf" simplification acceptable?

    Science.gov (United States)

    Sprintsin, M.; Chen, J. M.

    2009-05-01

    The "big-leaf" approach to calculating the carbon balance of plant canopies assumes that canopy carbon fluxes have the same relative responses to the environment as any single unshaded leaf in the upper canopy. Widely used light use efficiency models are essentially simplified versions of the big-leaf model. Despite its wide acceptance, subsequent developments in the modeling of leaf photosynthesis and measurements of canopy physiology have brought into question the assumptions behind this approach showing that big leaf approximation is inadequate for simulating canopy photosynthesis because of the additional leaf internal control on carbon assimilation and because of the non-linear response of photosynthesis on leaf nitrogen and absorbed light, and changes in leaf microenvironment with canopy depth. To avoid this problem a sunlit/shaded leaf separation approach, within which the vegetation is treated as two big leaves under different illumination conditions, is gradually replacing the "big-leaf" strategy, for applications at local and regional scales. Such separation is now widely accepted as a more accurate and physiologically based approach for modeling canopy photosynthesis. Here we compare both strategies for Gross Primary Production (GPP) modeling using the Boreal Ecosystem Productivity Simulator (BEPS) at local (tower footprint) scale for different land cover types spread over North America: two broadleaf forests (Harvard, Massachusetts and Missouri Ozark, Missouri); two coniferous forests (Howland, Maine and Old Black Spruce, Saskatchewan); Lost Creek shrubland site (Wisconsin) and Mer Bleue petland (Ontario). BEPS calculates carbon fixation by scaling Farquhar's leaf biochemical model up to canopy level with stomatal conductance estimated by a modified version of the Ball-Woodrow-Berry model. The "big-leaf" approach was parameterized using derived leaf level parameters scaled up to canopy level by means of Leaf Area Index. The influence of sunlit

  13. Missing Peroxy Radical Sources Within a Rural Forest Canopy

    Science.gov (United States)

    Wolfe, G. M.; Cantrell, C.; Kim, S.; Mauldin, R. L., III; Karl, T.; Harley, P.; Turnipseed, A.; Zheng, W.; Flocke, F.; Apel, E. C.; Hornbrook, R. S.; Hall, S. R.; Ullmann, K.; Henry, S. B.; DiGangi, J. P.; Boyle, E. S.; Kaser, L.; Schnitzhofer, R.; Hansel, A.; Graus, M.; Nakashima, Y.; Kajii, Y.; Guenther, A.; Keutsch, F. N.

    2013-01-01

    Organic peroxy (RO2) and hydroperoxy (HO2) radicals are key intermediates in the photochemical processes that generate ozone, secondary organic aerosol and reactive nitrogen reservoirs throughout the troposphere. In regions with ample biogenic hydrocarbons, the richness and complexity of peroxy radical chemistry presents a significant challenge to current-generation models, especially given the scarcity of measurements in such environments. We present peroxy radical observations acquired within a Ponderosa pine forest during the summer 2010 Bio-hydro-atmosphere interactions of Energy, Aerosols, Carbon, H2O, Organics and Nitrogen - Rocky Mountain Organic Carbon Study (BEACHON-ROCS). Total peroxy radical mixing ratios reach as high as 180 pptv and are among the highest yet recorded. Using the comprehensive measurement suite to constrain a near-explicit 0-D box model, we investigate the sources, sinks and distribution of peroxy radicals below the forest canopy. The base chemical mechanism underestimates total peroxy radicals by as much as a factor of 3. Since primary reaction partners for peroxy radicals are either measured (NO) or under-predicted (HO2 and RO2, i.e. self-reaction), missing sources are the most likely explanation for this result. A close comparison of model output with observations reveals at least two distinct source signatures. The first missing source, characterized by a sharp midday maximum and a strong dependence on solar radiation, is consistent with photolytic production of HO2. The diel profile of the second missing source peaks in the afternoon and suggests a process that generates RO2 independently of sun-driven photochemistry, such as ozonolysis of reactive hydrocarbons. The maximum magnitudes of these missing sources (approximately 120 and 50 pptv min-1, respectively) are consistent with previous observations alluding to unexpectedly intense oxidation within forests. We conclude that a similar mechanism may underlie many such observations.

  14. Bromeliad catchments as habitats for methanogenesis in tropical rainforest canopies

    Directory of Open Access Journals (Sweden)

    Shana K. Goffredi

    2011-12-01

    Full Text Available Tropical epiphytic plants within the family Bromeliaceae are unusual in that they possess foliage capable of retaining water and impounded material. This creates an acidic (pH 3.5-6.5 and anaerobic (< 1 ppm O2 environment suspended in the canopy. Results from a Costa Rican rainforest show that most bromeliads (n = 75/86 greater than ~20 cm in plant height or ~4-5 cm tank depth, showed presence of methanogens within the lower anoxic horizon of the tank. Archaea were dominated by methanogens (77-90% of recovered ribotypes and community structure, although variable, was generally comprised of a single type, closely related to either hydrogenotrophic Methanoregula or Methanocella, a specific clade of aceticlastic Methanosaeta, or Methanosarcina. Juvenile bromeliads, or those species, such as Guzmania, with shallow tanks, generally did not possess methanogens, as assayed by PCR specific for methanogen 16S rRNA genes, nor did artificial catchments (~ 100 ml volume, in place 6-12 months prior to sample collection. Methanogens were not detected in soil (n = 20, except in one case, in which the dominant ribotype was different from nearby bromeliads. Recovery of methyl coenzyme M reductase genes supported the occurrence of hydrogenotrophic and aceticlastic methanogens within bromeliad tanks, as well as the trend, via QPCR analysis of mcrA, of increased methanogenic capacity with increased plant height. Methane production rates of up to 300 nmol CH4 ml tank water -1 day-1 were measured in microcosm experiments. These results suggest that bromeliad-associated archaeal communities may play an important role in the cycling of carbon in neotropical forests.

  15. Quantitative detection of settled dust over green canopy

    Science.gov (United States)

    Brook, Anna

    2016-04-01

    The main task of environmental and geoscience applications are efficient and accurate quantitative classification of earth surfaces and spatial phenomena. In the past decade, there has been a significant interest in employing hyperspectral unmixing in order to retrieve accurate quantitative information latent in hyperspectral imagery data. Recently, the ground-truth and laboratory measured spectral signatures promoted by advanced algorithms are proposed as a new path toward solving the unmixing problem of hyperspectral imagery in semi-supervised fashion. This paper suggests that the sensitivity of sparse unmixing techniques provides an ideal approach to extract and identify dust settled over/upon green vegetation canopy using hyperspectral airborne data. Atmospheric dust transports a variety of chemicals, some of which pose a risk to the ecosystem and human health (Kaskaoutis, et al., 2008). Many studies deal with the impact of dust on particulate matter (PM) and atmospheric pollution. Considering the potential impact of industrial pollutants, one of the most important considerations is the fact that suspended PM can have both a physical and a chemical impact on plants, soils, and water bodies. Not only can the particles covering surfaces cause physical distortion, but particles of diverse origin and different chemistries can also serve as chemical stressors and cause irreversible damage. Sediment dust load in an indoor environment can be spectrally assessed using reflectance spectroscopy (Chudnovsky and Ben-Dor, 2009). Small amounts of particulate pollution that may carry a signature of a forthcoming environmental hazard are of key interest when considering the effects of pollution. According to the most basic distribution dynamics, dust consists of suspended particulate matter in a fine state of subdivision that are raised and carried by wind. In this context, it is increasingly important to first, understand the distribution dynamics of pollutants, and

  16. Fossil Leaves and Fossil Leaf n-Alkanes: Reconstructing the First Closed Canopied Rainforests

    Science.gov (United States)

    Graham, H. V.; Freeman, K. H.

    2013-12-01

    Although the age and location is disputed, the rise of the first closed-canopy forest is likely linked with the expansion of angiosperms in the late Cretacous or early Cenozoic. The carbon isotope 'canopy effect' reflects the extent of canopy closure, and is well documented in δ13C values of the leaves and leaf lipids in modern forests. To test the extent of canopy closure among the oldest documented angiosperm tropical forests, we analyzed isotopic characteristics of leaf fossils and leaf waxes from the Guaduas and Cerrejón Formations. The Guaduas Fm. (Maastrichtian) contains some of the earliest angiosperm fossils in the Neotropics, and both leaf morphology and pollen records at this site suggest an open-canopy structure. The Cerrejón Fm. (Paleocene) contains what are believed to be the first recorded fossil leaves from a closed-canopy forest. We analyzed the bulk carbon isotope content (δ13Cleaf) of 199 fossil leaves, as well as the n-alkane concentration and chain-length distribution, and δ13C of alkanes (δ13Clipid) of 73 fossil leaves and adjacent sediment samples. Fossil leaves are dominated by eudicots and include ten modern plant families (Apocynaceae, Bombaceae, Euphorbaceae, Fabaceae, Lauraceae, Malvaceae, Meliaceae, Menispermaceae, Moraceae, Sapotaceae). We interpreted extent of canopy coverage based on the range of δ13Cleaf values. The narrow range of δ13C values in leaves from the Guaduas Fm (2.7‰) is consistent with an open canopy. A significantly wider range in values (6.3‰) suggests a closed-canopy signature for site 0315 of the Cerrejón Fm,. In contrast, at Site 0318, a lacustrine deposit, leaves had a narrow range (3.3‰) in δ13C values, and this is not consistent with a closed-canopy, but is consistent with leaf assemblages from a forest edge. Leaves that accumulate in lake sediments tend to be biased toward plants living at the lake edge, which do not experience closed-canopy conditions, and do not express the isotopic

  17. Contrasting effects of sampling scale on insect herbivores distribution in response to canopy structure.

    Science.gov (United States)

    Neves, Frederico S; Sperber, Carlos F; Campos, Ricardo I; Soares, Janaína P; Ribeiro, Sérvio P

    2013-03-01

    Species diversity of insect herbivores associated to canopy may vary local and geographically responding to distinct factors at different spatial scales. The aim of this study was to investigate how forest canopy structure affects insect herbivore species richness and abundance depending on feeding guilds' specificities. We tested the hypothesis that habitat structure affects insect herbivore species richness and abundance differently to sap-sucking and chewing herbivore guilds. Two spatial scales were evaluated: inside tree crowns (fine spatial cale) and canopy regions (coarse spatial scale). In three sampling sites we measured 120 tree crowns, grouped n five points with four contiguous tree crowns. Insects were sampled by beating method from each crown and data were summed up for analyzing each canopy region. In crowns (fine spatial scale) we measured habitat tructure: trunk circumference, tree height, canopy depth, number of ramifications and maximum ramification level. In each point, defined as a canopy region (coarse spatial scale), we measured habitat structure using a vertical cylindrical transect: tree species richness, leaf area, sum of strata heights and maximum canopy height. A principal component analysis based on the measured variables for each spatial scale was run to estimate habitat structure parameters. To test the effects of habitat structure upon herbivores, different general linear models were adjusted using the first two principal components as explanatory variables. Sap-sucking insect species richness and all herbivore abundances increased with size of crown at fine spatial scale. On the other hand, chewer species richness and abundance increased with resource quantity at coarse scale. Feeding specialization, resources availability, and agility are discussed as ecological causes of the found pattern.

  18. [Characteristics of canopy structure of super high yielding japonica hybrid rice community].

    Science.gov (United States)

    Chen, Jinhong; Zhang, Guoping; Guo, Hengde; Mao, Guojuan

    2003-06-01

    In this paper, the characteristics of canopy structure, such as the numbers of seedling, panicle and grain, the distribution of dry matters in different canopy layers and different organs, and the distributions of LAI and of solar radiation in different canopy layers of super high yielding community of japonica hybrid rice were studied, in comparison with normal japonica rice. The results showed that the total the dry matter weight and the dry matter weight of layers below 40 cm, 40-60 cm, 60-80 cm and above 80 cm of japonica hybrid rice canopy were 32.29%, 29.12%, 13.95%, 16.45% and 100.17% higher those that of normal japonica rice, respectively. The ratios of dry leaf (photosynthetic organ) and of dry panicle (sink organ) weight to total dry weight were 24.8% and 12.8%, respectively, which were greater than those of normal japonica rice, while the ratios of dry sheath and stem (storage organs) weight were 33.6% and 28.9%, respectively, which were lower than those of normal japonica rice. The allotment of LAI in different layers of japonica hybrid rice canopy was reasonable, and the LAI of above 40 cm layer at full heading stage reached 5.44. The solar radiation was well-distributed inside japonica hybrid rice canopy, for example, the solar radiation in layers below 60 cm were 13.1%-37.0% higher, but 5.9%-12.2% lower above 60 cm than that of normal japonica rice. The extinction coefficients of solar radiation in layers below 20 cm, 20-40 cm, 40-60 cm and 60-80 cm of japonica hybrid rice canopy were 35.1%, 13.5%, 29.1% and 17.2% lower than that of normal japonica rice, respectively.

  19. Improving the Vegetation Dynamic Simulation in a Land Surface Model by Using a Statistical-dynamic Canopy Interception Scheme

    Institute of Scientific and Technical Information of China (English)

    LIANG Miaoling; XIE Zhenghui

    2008-01-01

    Canopy interception of incident precipitation, as a critical component of a forest's water budget, can affect the amount of water available to the soil, and ultimately vegetation distribution and function. In this paper, a statistical-dynamic approach based on leaf area index and statistical canopy interception is used to parameterize the canopy interception process. The statistical-dynamic canopy interception scheme is implemented into the Community Land Model with dynamic global vegetation model (CLM-DGVM) to improve its dynamic vegetation simulation. The simulation for continental China by the land surface model with the new canopy interception scheme shows that the new one reasonably represents the precipitation intercepted by the canopy. Moreover, the new scheme enhances the water availability in the root zone for vegetation growth, especially in the densely vegetated and semi-arid areas, and improves the model's performance of potential vegetation simulation.

  20. Changes in leaf area, nitrogen content and canopy photosynthesis in soybean exposed to an ozone concentration gradient.

    Science.gov (United States)

    Oikawa, Shimpei; Ainsworth, Elizabeth A

    2016-08-01

    Influences of ozone (O3) on light-saturated rates of photosynthesis in crop leaves have been well documented. To increase our understanding of O3 effects on individual- or stand level productivity, a mechanistic understanding of factors determining canopy photosynthesis is necessary. We used a canopy model to scale photosynthesis from leaf to canopy, and analyzed the importance of canopy structural and leaf ecophysiological characteristics in determining canopy photosynthesis in soybean stands exposed to 9 concentrations of [O3] (37-116 ppb; 9-h mean). Light intensity and N content peaked in upper canopy layers, and sharply decreased through the lower canopy. Plant leaf area decreased with increasing [O3] allowing for greater light intensity to reach lower canopy levels. At the leaf level, light-saturated photosynthesis decreased and dark respiration increased with increasing [O3]. These data were used to calculate daily net canopy photosynthesis (Pc). Pc decreased with increasing [O3] with an average decrease of 10% for an increase in [O3] of 10 ppb, and which was similar to changes in above-ground dry mass production of the stands. Absolute daily net photosynthesis of lower layers was very low and thus the decrease in photosynthesis in the lower canopy caused by elevated [O3] had only minor significance for total canopy photosynthesis. Sensitivity analyses revealed that the decrease in Pc was associated with changes in leaf ecophysiology but not with decrease in leaf area. The soybean stands were very crowded, the leaves were highly mutually shaded, and sufficient light for positive carbon balance did not penetrate to lower canopy leaves, even under elevated [O3].

  1. Frankia and Alnus rubra canopy roots: an assessment of genetic diversity, propagule availability, and effects on soil nitrogen.

    Science.gov (United States)

    Kennedy, Peter G; Schouboe, Jesse L; Rogers, Rachel H; Weber, Marjorie G; Nadkarni, Nalini M

    2010-02-01

    The ecological importance of microbial symbioses in terrestrial soils is widely recognized, but their role in soils that accumulate in forest canopies is almost entirely unknown. To address this gap, this study investigated the Frankia-Alnus rubra symbiosis in canopy and forest floor roots at Olympic National Park, WA, USA. Sixteen mature A. rubra trees were surveyed and Frankia genetic diversity in canopy and forest floor nodules was assessed with sequence-based nifH analyses. A seedling bioassay experiment was conducted to determine Frankia propagule availability in canopy and forest floor soils. Total soil nitrogen from both environments was also quantified. Nodules were present in the canopies of nine of the 16 trees sampled. Across the study area, Frankia canopy and forest floor assemblages were similar, with both habitats containing the same two genotypes. The composition of forest floor and canopy genotypes on the same tree was not always identical, however, suggesting that dispersal was not a strictly local phenomenon. Frankia seedling colonization was similar in canopy soils regardless of the presence of nodules as well as in forest floor soils, indicating that dispersal was not likely to be a major limiting factor. The total soil nitrogen of canopy soils was higher than that of forest floor soils, but the presence of Frankia nodules in canopy soils did not significantly alter soil nitrogen levels. Overall, this study indicates that the Frankia-A. rubra symbiosis is similar in canopy and forest floor environments. Because canopy roots are exposed to different environmental conditions within very small spatial areas and because those areas can be easily manipulated (e.g., fertilizer or watering treatments), they present microbial ecologists with a unique arena to examine root-microbe interactions.

  2. Detecting forest canopy layering: applying lidar remote sensing to further understand the role of vertical structure in species habitat preference

    Science.gov (United States)

    Whitehurst, A. S.; Dubayah, R.; Swatantran, A.

    2011-12-01

    Full waveform lidar reflects off all forest canopy elements, showing not only height, but also the structure within the canopy from the top to the forest floor, making it an ideal remote sensing technology for research in forest ecosystem dynamics. Vertical stratification or canopy layering has long been noted as an essential element in the forest ecosystem and of importance for species habitat. This project explores the utility of lidar for characterizing forest canopy layering and applying canopy layering information to better understand species habitat preference. Canopy layering will be mapped across the landscape using full-waveform lidar remote sensing data from the NASA Goddard Space Flight Center Laser Vegetation Imaging Sensor (LVIS). Two methods for quantifying layering have been developed from LVIS data collected during the summer of 2009 for Hubbard Brook Experimental Forest, New Hampshire. The two layering datasets (one categorical, one continuous) describe how vertical stratification varies across the forest with canopy height and elevation. The relationships between of canopy layering and avian species habitat preference will also be assessed for bird species within Hubbard Brook Experimental forest. These results will provide ecologically meaningful information and a relevant method for quantifying canopy layering at the landscape scale, which will aid in a better understanding of forest ecosystem dynamics for forest management and species habitat research.

  3. Testing the Suitability of a Terrestrial 2D LiDAR Scanner for Canopy Characterization of Greenhouse Tomato Crops.

    Science.gov (United States)

    Llop, Jordi; Gil, Emilio; Llorens, Jordi; Miranda-Fuentes, Antonio; Gallart, Montserrat

    2016-09-06

    Canopy characterization is essential for pesticide dosage adjustment according to vegetation volume and density. It is especially important for fresh exportable vegetables like greenhouse tomatoes. These plants are thin and tall and are planted in pairs, which makes their characterization with electronic methods difficult. Therefore, the accuracy of the terrestrial 2D LiDAR sensor is evaluated for determining canopy parameters related to volume and density and established useful correlations between manual and electronic parameters for leaf area estimation. Experiments were performed in three commercial tomato greenhouses with a paired plantation system. In the electronic characterization, a LiDAR sensor scanned the plant pairs from both sides. The canopy height, canopy width, canopy volume, and leaf area were obtained. From these, other important parameters were calculated, like the tree row volume, leaf wall area, leaf area index, and leaf area density. Manual measurements were found to overestimate the parameters compared with the LiDAR sensor. The canopy volume estimated with the scanner was found to be reliable for estimating the canopy height, volume, and density. Moreover, the LiDAR scanner could assess the high variability in canopy density along rows and hence is an important tool for generating canopy maps.

  4. [Photosynthetic rate, transpiration rate, and water use efficiency of cotton canopy in oasis edge of Linze].

    Science.gov (United States)

    Xie, Ting-Ting; Su, Pei-Xi; Gao, Song

    2010-06-01

    The measurement system of Li-8100 carbon flux and the modified assimilation chamber were used to study the photosynthetic characteristics of cotton (Gossypium hirsutum L.) canopy in the oasis edge region in middle reach of Heihe River Basin, mid Hexi Corridor of Gansu. At the experimental site, soil respiration and evaporation rates were significantly higher in late June than in early August, and the diurnal variation of canopy photosynthetic rate showed single-peak type. The photosynthetic rate was significantly higher (P rate also presented single-peak type, with the daily average value in late June and early August being (3.10 +/- 0.34) mmol H2O x m(-2) x s(-1) and (1.60 +/- 0.26) mmol H2O x m(-2) x s(-1), respectively, and differed significantly (P 0.05). Both in late June and in early August, the canopy photosynthetic rate was positively correlated with air temperature, PAR, and soil moisture content, suggesting that there was no midday depression of photosynthesis in the two periods. In August, the canopy photosynthetic rate and transpiration rate decreased significantly, because of the lower soil moisture content and leaf senescence, but the canopy water use efficiency had no significant decrease.

  5. Canopy influence on trace metal atmospheric inputs on forest ecosystems: Speciation in throughfall

    Science.gov (United States)

    Gandois, L.; Tipping, E.; Dumat, C.; Probst, A.

    2010-02-01

    Atmospheric inputs of selected Trace Metals (TM: Cd, Cu, Ni, Pb, Sb, Zn, as well as Al, Fe and Mn) were studied on six forested sites in France. In order to evaluate canopy interaction with atmospheric inputs, TM were measured in both Open Field Bulk Deposition (BD) and Throughfall (TF). Anthropogenic contribution to BD composition is high for Zn, Cd and Sb, reflecting actual TM emissions trends. Canopy greatly influences precipitation composition, through different processes, including assimilation and leaching by canopy, complexation as well as accumulation/dissolution of dry deposition. TM and Dissolved Organic Carbon (DOC) physical fractionation between colloidal and truly dissolved phases was performed with ultrafiltration. Al, Fe, Pb and Cu are found in the colloidal fraction whereas Cd, Ni, Zn and Sb are mostly in the truly dissolved fraction. Chemical speciation predicted with WHAM-VI shows that in throughfall, Al, Fe, Pb and Cu are almost entirely complexed by DOC, whereas Ni, Cd and Zn are present in average 30% in the free metal ion form. TM present in labile forms (Cd, Ni, Zn) interact with the canopy, are cycled in the ecosystem, and their concentration is either slightly increased or even decreased in throughfall. Sb, Pb and Cu concentration are increased through canopy, as a consequence of dry deposition accumulation.

  6. Modeling the Impact of Vegetation Structure on Canopy Radiative Transfer for a Global Vegetation Dynamic Model

    Science.gov (United States)

    Ni-Meister, W.; Kiang, N.; Yang, W.

    2007-12-01

    The transmission of light through plant canopies results in vertical profiles of light intensity that affect the photosynthetic activity and gas exchange of plants, their competition for light, and the canopy energy balance. The accurate representation of the canopy light profile is then important for predicting ecological dynamics. The study presents a simple canopy radiative transfer scheme to characterize the impact of the horizontal and vertical vegetation structure heterogeneity on light profiles. Actual vertical foliage profile and a clumping factor which are functions of tree geometry, size and density and foliage density are used to characterize the vertical and horizontal vegetation structure heterogeneity. The simple scheme is evaluated using the ground and airborne lidar data collected in deciduous and coniferous forests and was also compared with the more complex Geometric Optical and Radiative Transfer (GORT) model and the two-stream scheme currently being used to describe light interactions with vegetation canopy in most GCMs. The simple modeled PAR profiles match well with the ground data, lidar and full GORT model prediction, it performs much better than the simple Beer's&plaw used in two stream scheme. This scheme will have the same computation cost as the current scheme being used in GCMs, but provides better photosynthesis, radiative fluxes and surface albedo estimates, thus is suitable for a global vegetation dynamic model embedded in GCMs.

  7. A Comparison of Mangrove Canopy Height Using Multiple Independent Measurements from Land, Air, and Space

    Directory of Open Access Journals (Sweden)

    David Lagomasino

    2016-04-01

    Full Text Available Canopy height is one of the strongest predictors of biomass and carbon in forested ecosystems. Additionally, mangrove ecosystems represent one of the most concentrated carbon reservoirs that are rapidly degrading as a result of deforestation, development, and hydrologic manipulation. Therefore, the accuracy of Canopy Height Models (CHM over mangrove forest can provide crucial information for monitoring and verification protocols. We compared four CHMs derived from independent remotely sensed imagery and identified potential errors and bias between measurement types. CHMs were derived from three spaceborne datasets; Very-High Resolution (VHR stereophotogrammetry, TerraSAR-X add-on for Digital Elevation Measurement, and Shuttle Radar Topography Mission (TanDEM-X, and lidar data which was acquired from an airborne platform. Each dataset exhibited different error characteristics that were related to spatial resolution, sensitivities of the sensors, and reference frames. Canopies over 10 m were accurately predicted by all CHMs while the distributions of canopy height were best predicted by the VHR CHM. Depending on the guidelines and strategies needed for monitoring and verification activities, coarse resolution CHMs could be used to track canopy height at regional and global scales with finer resolution imagery used to validate and monitor critical areas undergoing rapid changes.

  8. Fractal Characteristics of Population Canopy Structure of the Mangrove, Bruguiera gymnorrhiza (L.) Lamk

    Institute of Scientific and Technical Information of China (English)

    Liang Shichu; Wang Bosun

    2003-01-01

    The fractal characteristics of the canopy structure of B. gvmnorrhiza population are investigated by fractal dimension analysis in the National Shankou Mangrove Nature Reserve. The 3-year-old branches have box dimensions between 1.22 and 1.55, showing the complexity degree of branching structure and the ability of occupying and utilizing ecological space. It may be considered that fractal dimension provides a useful index for the study of light utilization efficiencies and growth processes of B. gymnorrhiza. Calculated by using the two-surface method, the fractal dimensions for the crown pattern of individuals with ages of 20 to 50 years range from 2.21 to 2.54, indicating that the filling degree of foliage to a tree crown is relatively low and B. gymnorrhiza has the property of a sun plant.Along with the increase of ages of individuals, the filling degree of foliage to a tree crown changes from high to low, and so does the fractal dimension. The box dimensions obtained from the grayscale curves of population canopy are between 1.47 and 1.61. The greater the box dimension, the more loosely organized the canopy spatial structure, and the more the light spots. The canopy structural information and complexity of a population can be effectively captured by box dimensions obtained from canopy grayscale curves.

  9. Drag measurements in laterally confined 2D canopies: Reconfiguration and sheltering effect

    Science.gov (United States)

    Barsu, Sylvie; Doppler, Delphine; Jerome, J. John Soundar; Rivière, Nicolas; Lance, Michel

    2016-10-01

    Plants in aquatic canopies deform when subjected to a water flow and so, unlike a rigid bluff body, the resulting drag force FD grows sub-quadratically with the flow velocity U ¯ . In this article, the effect of density on the canopy reconfiguration and the corresponding drag reduction is experimentally investigated for simple 2D synthetic canopies in an inclinable, narrow water channel. The drag acting on the canopy, and also on individual sheets, is systematically measured via two independent techniques. Simultaneous drag and reconfiguration measurements demonstrate that data for different Reynolds numbers (400-2200), irrespective of sheet width (w) and canopy spacing (ℓ), collapse on a unique curve given by a bending beam model which relates the reconfiguration number and a properly rescaled Cauchy number. Strikingly, the measured Vogel exponent V and hence the drag reduction via reconfiguration is found to be independent of the spacing between sheets and the lateral confinement; only the drag coefficient decreases linearly with the sheet spacing since a strong sheltering effect exists as long as the spacing is smaller than a critical value depending on the sheet width.

  10. Developing a regional canopy fuels assessment strategy using multi-scale lidar

    Science.gov (United States)

    Peterson, Birgit E.; Nelson, Kurtis

    2011-01-01

    Accurate assessments of canopy fuels are needed by fire scientists to understand fire behavior and to predict future fire occurrence. A key descriptor for canopy fuels is canopy bulk density (CBD). CBD is closely linked to the structure of the canopy; therefore, lidar measurements are particularly well suited to assessments of CBD. LANDFIRE scientists are exploring methods to integrate airborne and spaceborne lidar datasets into a national mapping effort. In this study, airborne lidar, spaceborne lidar, and field data are used to map CBD in the Yukon Flats Ecoregion, with the airborne lidar serving as a bridge between the field data and the spaceborne observations. The field-based CBD was positively correlated with airborne lidar observations (R2=0.78). Mapped values of CBD using the airborne lidar dataset were significantly correlated with spaceborne lidar observations when analyzed by forest type (R2=0.62, evergreen and R2=0.71, mixed). Though continued research is necessary to validate these results, they do support the feasibility of airborne and, most importantly, spaceborne lidar data for canopy fuels assessment.

  11. Canopy arthropods community within and among oak species in central Mexico

    Institute of Scientific and Technical Information of China (English)

    Efraín TOVAR-SANCHEZ

    2009-01-01

    Quercus rugosa and Q.laurina are species that presents a wide geographical distribution range in temperate forests of Mexico. Oak canopies contain a considerable portion of arthropod diversity and the arthropods fauna fulfill a wide variety of ecological roles. We examined the effect of oak species and seasonal changes on some community structure parameters (diversity, composition, similarity, biomass, rare species, and density of arthropod fauna) of canopy arthropods. In total, 40 oak canopies were fogged during rainy and dry season. A total of 614 identified arthropod morphospecies were recognized belonging to 22 orders associated with tree canopies. A separation of host tree species during both seasons, suggesting a different community structure on host plants species was demonstrated by the principal component analyses (PCA), therefore, differences between oak species results in phenotypes that structure the composition of the arthropod community. Q.laurina registered the highest densities, diversity index and number of rare species in comparison with Q.rugosa. While arthropod biomass showed an inverse pattern. Trees more close to one another (spatial distance) register a more similar canopy arthropod fauna. This study suggests that the trees of Q.laurina could act as a center of biodiversity by the accumulation of arthropod fauna with a considerable number of rare species, which presents wide ecological roles or is involved in critical processes that maintain forest ecosystems[Current Zoology 55(2):132-144,2009].

  12. ASSESSMENT OF MANGROVE FOREST DEGRADATION THROUGH CANOPY FRACTIONAL COVER IN KARIMUNJAWA ISLAND, CENTRAL JAVA, INDONESIA

    Directory of Open Access Journals (Sweden)

    Muhammad Kamal

    2016-10-01

    Full Text Available The Karimunjawa Islands mangrove forest has been subjected to various direct and indirect human disturbances in the recent years. If not properly managed, this disturbance will lead to the degradation of mangrove habitat health. Assessing forest canopy fractional cover (fc using remote sensing data is one way of measuring mangrove forest degradation. This study aims to (1 estimate the forest canopy fc using a semi-empirical method, (2 assess the accuracy of the fc estimation and (3 create mangrove forest degradation from the canopy fc results. A sample set of in-situ fc was collected using the hemispherical camera for model development and accuracy assessment purposes. We developed semi-empirical relationship models between pixel values of ALOS AVNIR-2 image (10m pixel size and field fc, using Enhanced Vegetation Index (EVI as a proxy of the image spectral response. The results show that the EVI provides reasonable estimation accuracy of mangrove canopy fc in Karimunjawa Island with the values ranged from 0.17 to 0.96 (n = 69. The low fc values correspond to vegetation opening and gaps caused by human activities or mangrove dieback. The high fc values correspond to the healthy and dense mangrove stands, especially the Rhizophora sp formation at the seafront. The results of this research justify the use of simple canopy fractional cover model for assessing the mangrove forest degradation status in the study area. Further research is needed to test the applicability of this approach at different sites.

  13. Observing the forest canopy with a new ultra-violet compact airborne lidar.

    Science.gov (United States)

    Cuesta, Juan; Chazette, Patrick; Allouis, Tristan; Flamant, Pierre H; Durrieu, Sylvie; Sanak, Joseph; Genau, Pascal; Guyon, Dominique; Loustau, Denis; Flamant, Cyrille

    2010-01-01

    We have developed a new airborne UV lidar for the forest canopy and deployed it in the Landes forest (France). It is the first one that: (i) operates at 355 nm for emitting energetic pulses of 16 mJ at 20 Hz while fulfilling eye-safety regulations and (ii) is flown onboard an ultra-light airplane for enhanced flight flexibility. Laser footprints at ground level were 2.4 m wide for a flying altitude of 300 m. Three test areas of ≈ 500 × 500 m(2) with Maritime pines of different ages were investigated. We used a threshold method adapted for this lidar to accurately extract from its waveforms detailed forest canopy vertical structure: canopy top, tree crown base and undergrowth heights. Good detection sensitivity enabled the observation of ground returns underneath the trees. Statistical and one-to-one comparisons with ground measurements by field foresters indicated a mean absolute accuracy of ≈ 1 m. Sensitivity tests on detection threshold showed the importance of signal to noise ratio and footprint size for a proper detection of the canopy vertical structure. This UV-lidar is intended for future innovative applications of simultaneous observation of forest canopy, laser-induced vegetation fluorescence and atmospheric aerosols.

  14. Coupled atmosphere/canopy model for remote sensing of plant reflectance features

    Science.gov (United States)

    Gerstl, S. A.; Zardecki, A.

    1985-01-01

    Solar radiative transfer through a coupled system of atmosphere and plant canopy is modeled as a multiple-scattering problem through a layered medium of random scatterers. The radiative transfer equation is solved by the discrete-ordinates finite-element method. Analytic expressions are derived that allow the calculation of scattering and absorption cross sections for any plant canopy layer form measurable biophysical parameters such as the leaf area index, leaf angle distribution, and individual leaf reflectance and transmittance data. An expression for a canopy scattering phase function is also given. Computational results are in good agreement with spectral reflectance measurements directly above a soybean canopy, and the concept of greenness- and brightness-transforms of Landsat MSS data is reconfirmed with the computed results. A sensitivity analysis with the coupled atmosphere/canopy model quantifies how satellite-sensed spectral radiances are affected by increased atmospheric aerosols, by varying leaf area index, by anisotropic leaf scattering, and by non-Lambertian soil boundary conditions. Possible extensions to a 2-D model are also discussed.

  15. Selection of forest canopy gaps by male Cerulean Warblers in West Virginia

    Science.gov (United States)

    Perkins, Kelly A.; Wood, Petra Bohall

    2014-01-01

    Forest openings, or canopy gaps, are an important resource for many forest songbirds, such as Cerulean Warblers (Setophaga cerulea). We examined canopy gap selection by this declining species to determine if male Cerulean Warblers selected particular sizes, vegetative heights, or types of gaps. We tested whether these parameters differed among territories, territory core areas, and randomly-placed sample plots. We used enhanced territory mapping techniques (burst sampling) to define habitat use within the territory. Canopy gap densities were higher within core areas of territories than within territories or random plots, indicating that Cerulean Warblers selected habitat within their territories with the highest gap densities. Selection of regenerating gaps with woody vegetation >12 m within the gap, and canopy heights >24 m surrounding the gap, occurred within territory core areas. These findings differed between two sites indicating that gap selection may vary based on forest structure. Differences were also found regarding the placement of territories with respect to gaps. Larger gaps, such as wildlife food plots, were located on the periphery of territories more often than other types and sizes of gaps, while smaller gaps, such as treefalls, were located within territory boundaries more often than expected. The creations of smaller canopy gaps, <100 m2, within dense stands are likely compatible with forest management for this species.

  16. Effects of Plant Density on Yield and Canopy Micro Environment in Hybrid Cotton

    Institute of Scientific and Technical Information of China (English)

    YANG Guo-zheng; LUO Xue-jiao; NIE Yi-chun; ZHANG Xian-long

    2014-01-01

    A rational plant population is an important attribute to high yield of cotton, because it can provide a beneifcial micro environment within the canopy for plant growth and development as well as yield formation. A 2-yr ifeld experiment was conducted to determine the optimal plant density based on cotton yield in relation to the canopy micro environment (canopy temperature, relative humidity and light transmittance). Six plant densities (1.2-5.7 plants m-2) were arranged with a completely randomized block design. The highest cotton yield (1 507 kg ha-1) was obtained at 3.0 plants m-2 due to more bolls per unit ground area (79 bolls m-2), while the lowest yield (1 091 kg ha-1) was obtained at 1.2 plants m-2. Under the moderate plant density (3.0 plants m-2), there was a lower mean daily temperature (MDT, 27.1°C) attributing to medium daily minimum temperature (Tmin, 21.9°C) and the lowest daily maximum temperature (Tmax, 35.8°C), a moderate mean canopy light transmittance of 0.51, and lower mean daily relative humidity (MRH) of 79.7%from June to October. The results suggest that 3.0 plants m-2 would be the optimal plant density because it provides a better canopy micro environment.

  17. Physiological characteristics of high yield under cluster planting: photosynthesis and canopy microclimate of cotton

    Directory of Open Access Journals (Sweden)

    Ting-ting Xie

    2016-01-01

    Full Text Available Cotton produces more biomass and economic yield when cluster planting pattern (three plants per hole than in a traditional planting pattern (one plant per hole, even at similar plant densities, indicating that individual plant growth is promoted by cluster planting. The causal factors for this improved growth induced by cluster planting pattern, the light interception, canopy microclimate and photosynthetic rate of cotton were investigated in an arid region of China. The results indicated that the leaf area index and light interception were higher in cluster planting, and significantly different from those in traditional planting during the middle and late growth stages. Cotton canopy humidity at different growth stages was increased but canopy temperatures were reduced by cluster planting. In the later growth stage of cluster planting, the leaf chlorophyll content was higher and the leaf net photosynthetic rate and canopy photosynthetic rate were significantly increased in comparing with traditional planting pattern. We concluded that differences in canopy light interception and photosynthetic rate were the primary factors responsible for increased biomass production and economic yield in cluster planting compared with the traditional planting of cotton.

  18. A Canopy Density Model for Planar Orchard Target Detection Based on Ultrasonic Sensors.

    Science.gov (United States)

    Li, Hanzhe; Zhai, Changyuan; Weckler, Paul; Wang, Ning; Yang, Shuo; Zhang, Bo

    2016-12-24

    Orchard target-oriented variable rate spraying is an effective method to reduce pesticide drift and excessive residues. To accomplish this task, the orchard targets' characteristic information is needed to control liquid flow rate and airflow rate. One of the most important characteristics is the canopy density. In order to establish the canopy density model for a planar orchard target which is indispensable for canopy density calculation, a target density detection testing system was developed based on an ultrasonic sensor. A time-domain energy analysis method was employed to analyze the ultrasonic signal. Orthogonal regression central composite experiments were designed and conducted using man-made canopies of known density with three or four layers of leaves. Two model equations were obtained, of which the model for the canopies with four layers was found to be the most reliable. A verification test was conducted with different layers at the same density values and detecting distances. The test results showed that the relative errors of model density values and actual values of five, four, three and two layers of leaves were acceptable, while the maximum relative errors were 17.68%, 25.64%, 21.33% and 29.92%, respectively. It also suggested the model equation with four layers had a good applicability with different layers which increased with adjacent layers.

  19. BENTHIC METABOLISM ON A SHELTERED ROCKY SHORE: ROLE OF THE CANOPY IN THE CARBON BUDGET(1).

    Science.gov (United States)

    Golléty, Claire; Migné, Aline; Davoult, Dominique

    2008-10-01

    While the importance of canopy-forming algae in structuring ecosystems is recognized, their role in the carbon budget is still not well understood. To our knowledge, no measurements of rocky shores primary production and respiration under emersion periods have been carried out in situ. A benthic chamber coupled to a CO2 -infrared gas analyzer was used to measure gross primary production and respiration on the Ascophyllum nodosum (L.) Le Jol. zone of a sheltered rocky shore in Brittany, France. Over a year of monthly measurements on the zone with and without the A. nodosum canopy showed fairly high production and respiration values for the global community as well as carbon fluxes due to the canopy that largely dominated the benthic metabolism of the zone. The strong canopy respiration relative to the primary production also suggested a high metabolic activity by microscopic heterotrophs on the surface of the alga. Both the canopy and the understory annual primary production and respiration were under the control of light and temperature seasonal variations. Finally, the range of the amount of carbon produced on the A. nodosum zone during diurnal emersions was estimated. Additional measures accounting for the day-night cycles and seasonal light variations over an entire tidal cycle are, however, necessary to establish an annual carbon budget. Such measures using the benthic chamber together with complementary techniques would allow a better understanding of the functioning of sheltered rocky shores.

  20. Response of canopy stomatal conductance of Acacia mangium forest to environmental driving factors

    Institute of Scientific and Technical Information of China (English)

    Xiaojing LIU; Ping ZHAO; Xingquan RAO; Ling MA; Xian CAI; Xiaoping ZENG

    2008-01-01

    Granier's probes were applied to measure the sap flow of 14 sample trees in an Acacia mangium forest on the hilly lands in Heshan City, Guangdong, during the time period of October, 2003. The photosynthetically active radi-ation (PAR), air relative humidity (RH) and temperature of air (T) above the forest canopy were recorded. The sap flow measurement was used in combination with morphological characteristics of tree and forest structure to calculate the whole-tree transpiration (E), stand transpiration (Et), and mean canopy stomatal conductance (gc). Analyses on the rela-tionships between tree morphological characters and whole-tree water use, and on the responses of gc to PAR and vapor pressure deficit (D) were conducted. The results showed that whole-tree transpiration correlated significantly and positively with tree diameter at breast height (DBH) (p < 0.0001), with sapwood area (p < 0.0001), and with canopy size (p = 0.0007) logarithmically, but exponentially with tree height (p = 0.014). The analyses on the responses of canopy stomatal conductance showed that the maximum gc (gcmax) changed with PAR in a hyperbolic curve (p <0.0001) and with D in a logarithmic one (p < 0.0001). The results obtained with sap flow technique indicate its reliability and accuracy of the methods of estimation of whole-tree and stand transpirations and canopy stomatal conductance.

  1. Simulating sunflower canopy temperatures to infer root-zone soil water potential

    Science.gov (United States)

    Choudhury, B. J.; Idso, S. B.

    1983-01-01

    A soil-plant-atmosphere model for sunflower (Helianthus annuus L.), together with clear sky weather data for several days, is used to study the relationship between canopy temperature and root-zone soil water potential. Considering the empirical dependence of stomatal resistance on insolation, air temperature and leaf water potential, a continuity equation for water flux in the soil-plant-atmosphere system is solved for the leaf water potential. The transpirational flux is calculated using Monteith's combination equation, while the canopy temperature is calculated from the energy balance equation. The simulation shows that, at high soil water potentials, canopy temperature is determined primarily by air and dew point temperatures. These results agree with an empirically derived linear regression equation relating canopy-air temperature differential to air vapor pressure deficit. The model predictions of leaf water potential are also in agreement with observations, indicating that measurements of canopy temperature together with a knowledge of air and dew point temperatures can provide a reliable estimate of the root-zone soil water potential.

  2. Monitoring Protein and Starch Accumulation in Wheat Grains with Leaf SPAD and Canopy Spectral Reflectance

    Institute of Scientific and Technical Information of China (English)

    TIAN Yong-chao; ZHU yan; CAO Wei-xing; FAN Xue-mei; LIU Xiao-jun

    2003-01-01

    The research was conducted to determine the relationships of protein and starch accumulation dynamics in grains of wheat to post-heading leaf SPAD values and canopy spectral reflectance. The results showed that leaf nitrogen accumulation was exponentially related to leaf SPAD values and linearly related to canopy spectral reflectance, and that there was negative linear relationship between leaf nitrogen accumulation and grain protein accumulation, but positive linear relationship between post-heading leaf nitrogen translocation and grain protein accumulation at maturity. In addition, leaf SPAD values were parabolically related with and ratio indices R(1 500,610) and R(1 220,560) were exponentially related with protein and starch accumulation in grains. These results indicate that leaf SPAD values and canopy spectral reflectance should be good indicators of quality formation dynamics in wheat grains.

  3. Assessing the vegetation canopy influences on wind flow using wind tunnel experiments with artificial plants

    Science.gov (United States)

    Hong, Youngjoo; Kim, Dongyeob; Im, Sangjun

    2016-04-01

    Wind erosion causes serious problems and considerable threat in most regions of the world. Vegetation on the ground has an important role in controlling wind erosion by covering soil surface and absorbing wind momentum. A set of wind tunnel experiments was performed to quantitatively examine the effect of canopy structure on wind movement. Artificial plastic vegetations with different porosity and canopy shape were introduced as the model canopy. Normalized roughness length ( Z 0/ H) and shear velocity ratio ( R) were analyzed as a function of roughness density ( λ). Experiments showed that Z 0/ H increases and R decreases as λ reaches a maximum value, λ max, while the values of Z 0/ H and R showed little change with λ value beyond as λ max.

  4. High-dose therapy improved the bone remodelling compartment canopy and bone formation in multiple myeloma

    DEFF Research Database (Denmark)

    Hinge, Maja; Delaissé, Jean-Marie; Plesner, Torben;

    2015-01-01

    . Loss of this canopy has been associated with bone loss. This study addresses whether the bone remodelling in MM is improved by high-dose therapy. Bone marrow biopsies obtained from 20 MM patients, before and after first-line treatment with high-dose melphalan followed by autologous stem cell...... transplantation, and from 20 control patients with monoclonal gammopathy of undetermined significance were histomorphometrically investigated. This investigation confirmed that MM patients exhibited uncoupled bone formation to resorption and reduced canopy coverage. More importantly, this study revealed......Bone loss in multiple myeloma (MM) is caused by an uncoupling of bone formation to resorption trigged by malignant plasma cells. Increasing evidence indicates that the bone remodelling compartment (BRC) canopy, which normally covers the remodelling sites, is important for coupled bone remodelling...

  5. Progressive forest canopy water loss during the 2012-2015 California drought.

    Science.gov (United States)

    Asner, Gregory P; Brodrick, Philip G; Anderson, Christopher B; Vaughn, Nicholas; Knapp, David E; Martin, Roberta E

    2016-01-12

    The 2012-2015 drought has left California with severely reduced snowpack, soil moisture, ground water, and reservoir stocks, but the impact of this estimated millennial-scale event on forest health is unknown. We used airborne laser-guided spectroscopy and satellite-based models to assess losses in canopy water content of California's forests between 2011 and 2015. Approximately 10.6 million ha of forest containing up to 888 million large trees experienced measurable loss in canopy water content during this drought period. Severe canopy water losses of greater than 30% occurred over 1 million ha, affecting up to 58 million large trees. Our measurements exclude forests affected by fire between 2011 and 2015. If drought conditions continue or reoccur, even with temporary reprieves such as El Niño, we predict substantial future forest change.

  6. Experimental Study on the Wing Formation of a Paraglider Canopy Cell (Inflatable Wing)

    Science.gov (United States)

    Yamamori, Keitaro; Umemura, Akira; Hishida, Manabu

    This study focuses on the formation mechanism of para-foil canopy. Three types of model wing, which represent each cell of para-foil canopy (a rigid wing with air intake, an inflatable wing and a cassette model) were prepared to explore the effects of air intake on inflatable wing formation in wind tunnel experiments. The flow fields both outside and inside of the wings were investigated, together with the process that the flexible wing inflates to form a wing. It was found that the robust nature of canopy is derived from the concaving deformation of the leading edge at small angles of attack, and the enhanced outward suction pressure acting on the leading edge, which are caused by the flexibility of the wing as well as the pressure of air intake in sacrifice of increased drag coefficient.

  7. The gap probability model for canopy thermal infrared emission with non-scattering approximation

    Institute of Scientific and Technical Information of China (English)

    牛铮; 柳钦火; 高彦春; 张庆员; 王长耀

    2000-01-01

    To describe canopy emitting thermal radiance precisely and physically is one of the key researches in retrieving land surface temperature (LSI) over vegetation-covered regions by remote sensing technology. This work is aimed at establishing gap probability models to describe the thermal emission characteristics in continuous plant, including the basic model and the sunlit model. They are suitable respectively in the nighttime and in the daytime. The sunlit model is the basic model plus a sunlit correcting item which takes the hot spot effect into account. The researches on the directional distribution of radiance and its relationship to canopy structural parameters, such as the leaf area index (LAI) and leaf angle distribution (LAD), were focused. The characteristics of directional radiance caused by temperature differences among components in canopy, such as those between leaf and soil, and between sunlit leaf or soil and shadowed leaf or soil, were analyzed. A well fitting between experimental data an

  8. Estimation of dry deposition fluxes of major inorganic species by canopy throughfall approach

    Institute of Scientific and Technical Information of China (English)

    JIN Lei; SHAO Min; ZENG Limin; ZHAO Dawei; TANG Dagang

    2006-01-01

    Dry deposition in China has not yet been intensively studied even though it constitutes an important pathway for acid deposition. The total deposition was monitored at Tieshanping catchment, a regional remote site in Chongqing City. The dry deposition loads of sulphur, calcium and nitrogen are estimated by using a canopy throughfall approach. The results indicate that the annual dry deposition loads of sulphur and calcium at Tieshanping site are much higher than those measured in forestry areas in other countries, while the dry deposition flux of nitrogen is at a comparable level. The dry deposition loads of sulphur, calcium and nitrogen are all higher than the wet deposition loads. Applying a canopy budget model has proven that the routine, simplified canopy throughfall approach may underestimate the dry deposition flux of nitrogen-containing species.

  9. [Simulation of rice canopy evapotranspiration and water use efficiency under free-air CO2 enrichment].

    Science.gov (United States)

    Wang, Ming-na; Luo, Wei-hong; Sun, Yan-kun; Zhu, Jian-guo

    2008-11-01

    By using FACE system, the microclimate in rice canopy and related physiological indices were observed continuously from the elongation to the maturing stage of rice growth, and the effects of FACE on the rice canopy evapotranspiration and water use efficiency were studied and simulated with energy balance analysis. The results showed that using P-M equation to describe the quantitative relationships of rice leaf stomatal conductance with photosynthetically active radiation (PAR) and vapour pressure deficit (VPD) could better simulate rice canopy evapotranspiraton under FACE and ambient conditions. During observation period, the total water use of rice in FACE plot had a 10 mm decrease, compared with that in control plot. Considering of the 12% increase of total biomass, the water use efficiency of rice under FACE condition was increased by 12%.

  10. Photosynthesis and stomatal conductance related to reflectance on the canopy scale

    Science.gov (United States)

    Verma, S. B.; Sellers, P. J.; Walthall, C. L.; Hall, F. G.; Kim, J.; Goetz, S. J.

    1993-01-01

    Field measurements of carbon dioxide and water vapor fluxes were analyzed in conjunction with reflectances obtained from a helicopter-mounted Modular Multiband Radiometer at a grassland study site during the First International Satellite Land Surface Climatology Project Field Experiment. These measurements are representative of the canopy scale and were made over a range of meteorological and soil moisture conditions during different stages in the annual life cycle of the prairie vegetation, and thus provide a good basis for investigating hpotheses/relationships potentially useful in remote sensing applications. We tested the hypothesis (Sellers, 1987) that the simple ratio vegetation index should be near-linearly related to the derivatives of the unstressed canopy stomatal conductance and the unstressed canopy photosynthesis with respect to photosynthetically active radiation. Even though there is some scatter in our data, the results seem to support this hypothesis.

  11. Changes in canopy structure and ant assemblages affect soil ecosystem variables as a foundation species declines

    DEFF Research Database (Denmark)

    Kendrick, Joseph A.; Ribbons, Relena Rose; Classen, Aimee Taylor;

    2015-01-01

    in ant species composition would interact to alter soil ecosystem variables. In the Harvard Forest Hemlock Removal Experiment (HF-HeRE), established in 2003, T. canadensis in large plots were killed in place or logged and removed to mimic adelgid infestation or salvage harvesting, respectively. In 2006......, we built ant exclosure subplots within all of the canopy manipulation plots to examine direct and interactive effects of canopy change and ant assemblage composition on soil and litter variables. Throughout HF-HeRE, T. canadensis was colonized by the adelgid in 2009, and the infested trees are now...... declining. The experimental removal of T. canadensis from the canopy was associated with an increase in the rate of cellulose decomposition by >50%, and exclosure of ants from subplots directly reduced their soil nitrate availability by 56%. Partial least squares path models revealed sequential interactive...

  12. Seasonal variability of interception evaporation from the canopy of a mixed deciduous forest

    DEFF Research Database (Denmark)

    Herbst, Mathias; Rosier, Paul T.W.; McNeil, David D.;

    2008-01-01

    Gross rainfall, net rainfall and stemflow were measured in a mixed deciduous woodland in southern England over a period of 14 months. Continuous measurements of standard weather data and momentum and sensible heat fluxes between the forest canopy and the atmosphere accompanied the investigation....... The gross rainfall was corrected for catch losses due to high turbulence. Reliable net rainfall data were obtained from a combined application of simple storage gauges and troughs connected to automatic tipping bucket gauges. The evaporation rates from the wet canopy were calculated with the Penman......% in the leafless period. The analytical sparse canopy rainfall interception model of Gash et al. [Gash, J.H.C., Lloyd, C.R., Lachaud, G., 1995. Estimating sparse forest rainfall interception with an analytical model. J. Hydrol. 170, 79-86] was parameterised, for the first time, for a mixed deciduous woodland...

  13. Detecting Canopy Water Status Using Shortwave Infrared Reflectance Data From Polar Orbiting and Geostationary Platforms

    DEFF Research Database (Denmark)

    Fensholt, Rasmus; Huber Gharib, Silvia; Proud, Simon Richard;

    2010-01-01

    Various canopy water status estimates have been developed from recent advances in Earth Observation (EO) technology. A promising methodology is based on the sensitivity of shortwave infrared (SWIR) reflectance to variations in leaf water content. This study explores the potential of SWIR-based ca......Various canopy water status estimates have been developed from recent advances in Earth Observation (EO) technology. A promising methodology is based on the sensitivity of shortwave infrared (SWIR) reflectance to variations in leaf water content. This study explores the potential of SWIR......-based canopy water status detection from geostationary Meteosat Second Generation (MSG) Spinning Enhanced Visible and Infrared Imager (SEVIRI) data as compared to polar orbiting environmental satellite (POES)-based moderate resolution imaging spectroradiometer (MODIS) data. The EO-based SWIR water stress index...

  14. A state-space modeling approach to estimating canopy conductance and associated uncertainties from sap flux density data.

    Science.gov (United States)

    Bell, David M; Ward, Eric J; Oishi, A Christopher; Oren, Ram; Flikkema, Paul G; Clark, James S

    2015-07-01

    Uncertainties in ecophysiological responses to environment, such as the impact of atmospheric and soil moisture conditions on plant water regulation, limit our ability to estimate key inputs for ecosystem models. Advanced statistical frameworks provide coherent methodologies for relating observed data, such as stem sap flux density, to unobserved processes, such as canopy conductance and transpiration. To address this need, we developed a hierarchical Bayesian State-Space Canopy Conductance (StaCC) model linking canopy conductance and transpiration to tree sap flux density from a 4-year experiment in the North Carolina Piedmont, USA. Our model builds on existing ecophysiological knowledge, but explicitly incorporates uncertainty in canopy conductance, internal tree hydraulics and observation error to improve estimation of canopy conductance responses to atmospheric drought (i.e., vapor pressure deficit), soil drought (i.e., soil moisture) and above canopy light. Our statistical framework not only predicted sap flux observations well, but it also allowed us to simultaneously gap-fill missing data as we made inference on canopy processes, marking a substantial advance over traditional methods. The predicted and observed sap flux data were highly correlated (mean sensor-level Pearson correlation coefficient = 0.88). Variations in canopy conductance and transpiration associated with environmental variation across days to years were many times greater than the variation associated with model uncertainties. Because some variables, such as vapor pressure deficit and soil moisture, were correlated at the scale of days to weeks, canopy conductance responses to individual environmental variables were difficult to interpret in isolation. Still, our results highlight the importance of accounting for uncertainty in models of ecophysiological and ecosystem function where the process of interest, canopy conductance in this case, is not observed directly. The StaCC modeling

  15. Nitrogen cycling in canopy soils of tropical montane forests responds rapidly to indirect N and P fertilization.

    Science.gov (United States)

    Matson, Amanda L; Corre, Marife D; Veldkamp, Edzo

    2014-12-01

    Although the canopy can play an important role in forest nutrient cycles, canopy-based processes are often overlooked in studies on nutrient deposition. In areas of nitrogen (N) and phosphorus (P) deposition, canopy soils may retain a significant proportion of atmospheric inputs, and also receive indirect enrichment through root uptake followed by throughfall or recycling of plant litter in the canopy. We measured net and gross rates of N cycling in canopy soils of tropical montane forests along an elevation gradient and assessed indirect effects of elevated nutrient inputs to the forest floor. Net N cycling rates were measured using the buried bag method. Gross N cycling rates were measured using (15) N pool dilution techniques. Measurements took place in the field, in the wet and dry season, using intact cores of canopy soil from three elevations (1000, 2000 and 3000 m). The forest floor had been fertilized biannually with moderate amounts of N and P for 4 years; treatments included control, N, P, and N + P. In control plots, gross rates of NH4 (+) transformations decreased with increasing elevation; gross rates of NO3 (-) transformations did not exhibit a clear elevation trend, but were significantly affected by season. Nutrient-addition effects were different at each elevation, but combined N + P generally increased N cycling rates at all elevations. Results showed that canopy soils could be a significant N source for epiphytes as well as contributing up to 23% of total (canopy + forest floor) mineral N production in our forests. In contrast to theories that canopy soils are decoupled from nutrient cycling in forest floor soil, N cycling in our canopy soils was sensitive to slight changes in forest floor nutrient availability. Long-term atmospheric N and P deposition may lead to increased N cycling, but also increased mineral N losses from the canopy soil system.

  16. Turbulent Transfer Coefficients and Calculation of Air Temperature inside Tall Grass Canopies in Land Atmosphere Schemes for Environmental Modeling.

    Science.gov (United States)

    Mihailovic, D. T.; Alapaty, K.; Lalic, B.; Arsenic, I.; Rajkovic, B.; Malinovic, S.

    2004-10-01

    A method for estimating profiles of turbulent transfer coefficients inside a vegetation canopy and their use in calculating the air temperature inside tall grass canopies in land surface schemes for environmental modeling is presented. The proposed method, based on K theory, is assessed using data measured in a maize canopy. The air temperature inside the canopy is determined diagnostically by a method based on detailed consideration of 1) calculations of turbulent fluxes, 2) the shape of the wind and turbulent transfer coefficient profiles, and 3) calculation of the aerodynamic resistances inside tall grass canopies. An expression for calculating the turbulent transfer coefficient inside sparse tall grass canopies is also suggested, including modification of the corresponding equation for the wind profile inside the canopy. The proposed calculations of K-theory parameters are tested using the Land Air Parameterization Scheme (LAPS). Model outputs of air temperature inside the canopy for 8 17 July 2002 are compared with micrometeorological measurements inside a sunflower field at the Rimski Sancevi experimental site (Serbia). To demonstrate how changes in the specification of canopy density affect the simulation of air temperature inside tall grass canopies and, thus, alter the growth of PBL height, numerical experiments are performed with LAPS coupled with a one-dimensional PBL model over a sunflower field. To examine how the turbulent transfer coefficient inside tall grass canopies over a large domain represents the influence of the underlying surface on the air layer above, sensitivity tests are performed using a coupled system consisting of the NCEP Nonhydrostatic Mesoscale Model and LAPS.

  17. A modified micrometeorological gradient method for estimating O3 dry deposition over a forest canopy

    Directory of Open Access Journals (Sweden)

    Z. Y. Wu

    2015-01-01

    Full Text Available Small pollutant concentration gradients between levels above a plant canopy result in large uncertainties in estimated air–surface exchange fluxes when using existing micrometeorological gradient methods, including the aerodynamic gradient method (AGM and the modified Bowen-Ratio method (MBR. A modified micrometeorological gradient method (MGM is proposed in this study for estimating O3 dry deposition fluxes over a forest canopy using concentration gradients between a level above and a level below the canopy top, taking advantage of relatively large gradients between these levels due to significant pollutant uptake at top layers of the canopy. The new method is compared with the AGM and MBR methods and is also evaluated using eddy-covariance (EC flux measurements collected at the Harvard Forest Environmental Measurement Site, Massachusetts during 1993–2000. All the three gradient methods (AGM, MBR and MGM produced similar diurnal cycles of O3 dry deposition velocity (Vd(O3 to the EC measurements, with the MGM method being the closest in magnitude to the EC measurements. The multi-year average Vd(O3 differed significantly between these methods, with the AGM, MBR and MGM method being 2.28, 1.45 and 1.18 times of that of the EC. Sensitivity experiments identified several input parameters for the MGM method as first-order parameters that affect the estimated Vd(O3. A 10% uncertainty in the wind speed attenuation coefficient or canopy displacement height can cause about 10% uncertainty in the estimated Vd(O3. An unrealistic leaf area density vertical profile can cause an uncertainty of a factor of 2.0 in the estimated Vd(O3. Other input parameters or formulas for stability functions only caused an uncertainly of a few percent. The new method provides an alternative approach in monitoring/estimating long-term deposition fluxes of similar pollutants over tall canopies.

  18. Correlations between canopy gaps and species diversity in broad-leaved and Korean pine mixed forests

    Institute of Scientific and Technical Information of China (English)

    ZHAO Xiuhai; ZHANG Chunyu; ZHENG Jingming

    2006-01-01

    Regeneration of tree species associated with canopy gaps in broad-leaved Korean pine forests was investigated.Species diversity in gaps and under closed canopy was compared,the relationship between biodiversity and gap structure was analyzed.Results indicate that there were significant differences between tree species diversity in gaps and that under canopy (p<0.01).In terms of Shannon-Wiener index,evenness index,and abundance index,the biodiversity in gap community were higher than those under forest canopy in regeneration layer.In terms of Simpson's dominance index,the dominance of certain species in the regeneration layer increased from gaps to closed canopy (p<0.01).In contrast,trends of biodiversity changes of succession layer in gaps and under closed canopy were opposite.Tree species diversity of different layers reacted directly to the change of gap size class.For example,Shannon-Wiener index and abundance index is higher and Simpson's dominance index is the lowest in succession layer of medium-size gap (100-250 m2) in the broad-leaved Korean pine forest of Changbai Mountains.Shannon-Wiener index reached the highest in a size of≥250 m2 and<100 m2,reached the lowest in a size of 200-250 m2 in the regeneration layer.Simpson's dominance index reached its maximum when the gap size was between 200 and 250m2.Generally,species of different layers reacted differently to the changes of gap size classes.The gap size class with more seedlings did not correspond to size class containing more medium-size trees.Tree species diversity indices in the two layers behaved reciprocally during the development process of forest gaps.

  19. A Study on Effect of Water Background on Canopy Spectral of Wetland Aquatic Plant.

    Science.gov (United States)

    Liu, Guang; Tang, Peng; Cai Zhan-qing; Wang, Tian-tian; Xu, Jun-feng

    2015-10-01

    Aquatic vegetation is the core of the wetland ecosystem, and it's also the main factor influencing the wetland ecosystem functions. In recent years, satellite remote sensing technology has been widely used in the investigation, classification and protection fields of wetland vegetation resources. Because of its unique growth environment, aquatic vegetation, the canopy spectrum of aquatic vegetation will be affected by water background elements including air-water interface, plankton in the water, sediment content, transparency, water depth, sediment, and the other optically active ingredients. When the remote sensing technology for wetland aquatic vegetation canopy spectral studies, should be considered the growth environment differences between aquatic and terrestrial vegetation. However, previous studies did not get the attention it deserves. This paper choose a typical water plant (Iris tentorium Maxim) as the research object, simulate the growth environment of wetland aquatic plants, use the feature spectrometer measurements the spectral reflectance of Iris tentorium Maxim vegetation canopy under different water depth gradient background (400-2 400 nm). Experimental results show that there is a significant negative correlation between background water depth and Iris canopy reflectance. Visible light band absolute correlation coefficient is above 0.9, near infrared band absolute correlation coefficient is above 0.8. In visible light and near infrared band, with water depth increases, the Iris canopy reflectance decreases obviously. Finally based on the highest correlation band of visible light and near infrared region (505, 717, 1 075 and 2 383 nm) established the linear equation between background water depth and the canopy reflectance, obtained the related parameters.

  20. Canopy and leaf composition drive patterns of nutrient release from pruning residues in a coffee agroforest.

    Science.gov (United States)

    Tully, Katherine L; Lawrence, Deborah

    2012-06-01

    In a coffee agroforest, the crop is cultivated under the shade of fruit-bearing and nitrogen (N)-fixing trees. These trees are periodically pruned to promote flowering and fruiting as well as to make nutrients stored in tree biomass available to plants. We investigated the effect of canopy composition and substrate quality on decomposition rates and patterns of nutrient release from pruning residues in a coffee agroforest located in Costa Rica's Central Valley. Initial phosphorus (P) release was enhanced under a canopy composed solely of N-fixing, Erythrina poeppigiana compared to a mixed canopy of Erythrina and Musa acuminata (banana). Both initial and final N release were similar under the two canopy types. However, after five months of decomposition, a higher proportion of initial N had been released under the single canopy. Although patterns of decomposition and nutrient release were not predicted by initial substrate quality, mass loss in leaf mixtures rates were well predicted by mean mass loss of their component species. This study identifies specific pruning regimes that may regulate N and P release during crucial growth periods, and it suggests that strategic pruning can enhance nutrient availability. For example, during the onset of rapid fruit growth, a two-species mixture may release more P than a three-species mixture. However, by the time of the harvest, the two- and three-species mixtures have released roughly the same amount of N and P. These nutrients do not always follow the same pattern, as N release can be maximized in single-species substrates, while P release is often facilitated in species mixtures. Our study indicates the importance of management practices in mediating patterns of nutrient release. Future research should investigate how canopy composition and farm management can also mediate on-farm nutrient losses.

  1. Backscattering of Individual LIDAR Pulses from Forest Canopies Explained by Photogrammetrically Derived Vegetation Structure

    Science.gov (United States)

    Korpela, I.; Hovi, A.; Korhonen, L.

    2013-05-01

    In recent years, airborne LiDAR sensors have shown remarkable performance in the mapping of forest vegetation. This experimental study looks at LiDAR data at the scale of individual pulses to elucidate the sources behind interpulse variation in backscattering. Close-range photogrammetry was used for obtaining the canopy reference measurements at the ratio scale. The experiments illustrated different orientation techniques in the field, LiDAR acquisitions and photogrammetry in both leaf-on and leaf-off conditions, and two-waveform recording LiDAR sensors. The intrafootprint branch silhouettes in zenith-looking images, in which the camera, footprint, and LiDAR sensor were collinear, were extracted and contrasted with LiDAR backscattering. An enhanced planimetric match (refinement of strip matching) was achieved by shifting the pulses in a strip and searching for the maximal correlation between the silhouette and LiDAR intensity. The relative silhouette explained up to 80-90% of the interpulse variation. We tested whether accounting for the Gaussian spread of intrafootprint irradiance would improve the correlations, but the effect was blurred by small-scale geometric noise. Accounting for receiver gain variations in the Leica ALS60 sensor data strengthened the dependences. The size of the vegetation objects required for triggering a LiDAR observation was analyzed. We demonstrated the use of LiDAR pulses adjacent to canopy vegetation, which did not trigger a canopy echo, for canopy mapping. Pulses not triggering an echo constitute the complement to the actual canopy. We conclude that field photogrammetry is a useful tool for mapping forest canopies from below and that quantitative analysis is feasible even at the scale of single pulses for enhanced understanding of LiDAR observations from vegetation.

  2. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain.

    Science.gov (United States)

    Bischof, Kai; Peralta, Gloria; Kräbs, Gudrun; Van De Poll, Willem H; Pérez-Lloréns, José Lucas; Breeman, Anneke M

    2002-12-01

    Within the sheltered creeks of Cádiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA damage in Ulva aff. rotundata Bliding from southern Spain was assessed in the field. Samples collected from the natural community were covered by screening filters, generating different radiation conditions. During daily cycles, individual thalli showed photoinhibitory effects of the natural solar radiation. This inhibition was even more pronounced in samples only exposed to photosynthetically active radiation (PAR). Strongly increased heat dissipation in these samples indicated the activity of regulatory mechanisms involved in dynamic photoinhibition. Adverse effects of UV-B radiation on photosynthesis were only observed in combination with high levels of PAR, indicating the synergistic effects of the two wavelength ranges. In samples exposed either to PAR+UV-A or to UV-B+UV-A without PAR, no inhibition of photosynthetic quantum yield was found in the course of the day. At the natural site, the top layer of the mat-like canopies is generally completely bleached. Artificially designed Ulva canopies exhibited fast bleaching of the top layer under the natural solar radiation conditions, while this was not observed in canopies either shielded from UV or from PAR. The bleached first layer of the canopies acts as a selective UV-B filter, and thus prevents subcanopy thalli from exposure to harmful radiation. This was confirmed by the differences in photosynthetic activity, pigment composition, and the concentration of RubisCO in thalli with different positions within the canopy. In addition, the induction of the stress protein CPN 60 under UV exposure and the low accumulation of DNA damage indicate the presence of physiological protection mechanisms against harmful UV-B. A

  3. Impact of Canopy Cover on Butterfly Abundance and Diversity in Intermediate Zone Forest of Sri Lanka

    Directory of Open Access Journals (Sweden)

    B.M.B Weerakoon

    2015-09-01

    Full Text Available This study was designed to identify the influence of canopy cover on butterfly abundance in young secondary forest and regenerating forest at Maragamuwa area of Kumaragala forest reserve in Naula, Matale district of Sri Lanka. Line transect method was used to collect data. Hundred meter long five transects were established in each forest area. Butterfly abundance data were collected weekly for eight months from January to August 2014. Regenerating forest had low canopy cover (<50% than young secondary forest (20-90%. Total of 2,696 butterflies belonging to 87 species in six families were recorded. Some butterfly species were restricted to shady areas, but most butterflies were abundant in sunny areas. Butterflies in some families (Family Lycanidae, Nymphalidae, Pieridae were abundant in sunny conditions and some families (Family Hesperiidae, Papilionidae abundant in shade. ANOVA was conducted to identify the variation of number of species (F=54.05, p<0.001 and among abundance (F=10.49, p<0.05 with the canopy cover. Species richness was high in moderate canopy cover (20±5%. Negative Pearson correlation coefficient stated butterfly abundance decreased with the canopy cover (r=-0.91 and species richness decreased with canopy cover (r=-0.85.Some butterflies were common in sunny areas and some species were confined to shady areas. However, most of the species were generally found throughout the area. Regenerating forest encountered more shrubs than in young secondary forest, which butterflies preferred to food on. Main findings of the study were that butterfly abundance was high in sunny areas and butterfly species richness was high in moderate shady areas.

  4. Constraining canopy biophysical simulations with daily MODIS reflectance data ensuring pixel-target adequacy

    Science.gov (United States)

    Drewry, D.; Duveiller, G.

    2013-12-01

    Modern vegetation models incorporate ecophysiological details that allow for accurate estimates of carbon dioxide uptake, water use and energy exchange, but require knowledge of dynamic structural and biochemical traits. Variations in these traits are controlled by genetic factors as well as growth stage and nutrient and moisture availability, making them difficult to predict and prone to significant error. Here we explore the use of daily MODIS optical reflectance data for constraining key canopy- and leaf-level traits required by forward biophysical models. A multi-objective optimization algorithm is used to invert the PROSAIL canopy radiation transfer model against MODIS optical reflectance observations. PROSAIL accounts for the effects of leaf-level optical properties, foliage distribution and orientation on canopy reflectance across the optical range. Inversions are conducted for several growing seasons for both soybean and maize at multiple sites across the Central US agro-ecosystem. These inversions provide estimates of seasonal variations, and associated uncertainty, of variables such as leaf area index (LAI). The inversion-derived canopy properties are used to examine the ability of MODIS data to characterize seasonal variations in these states relative to field observations. The canopy properties are then used as inputs into the MLCan biophysical model to conduct forward simulations. MLCan characterizes the ecophysiological functioning of a plant canopy at a half-hourly timestep, and has been rigorously validated for both C3 and C4 crops against observations of canopy CO2 uptake, evapotranspiration and sensible heat exchange. By utilizing the inverted canopy states to drive MLCan over several growing seasons, we are able to assess the impact of uncertainty in the MODIS inversion procedure on uncertainties in forward model flux estimates. This work requires the use of instant (non-composited) observations obtained at a daily frequency from both Terra and

  5. Chlorophyll Fluorescence Emissions of Vegetation Canopies From High Resolution Field Reflectance Spectra

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Daughtry, C. S. T.; Campbell, P. K. Entcheva

    2006-01-01

    A two-year experiment was performed on corn (Zea mays L.) crops under nitrogen (N) fertilization regimes to examine the use of hyperspectral canopy reflectance information for estimating chlorophyll fluorescence (ChlF) and vegetation production. Fluorescence of foliage in the laboratory has proven more rigorous than reflectance for correlation to plant physiology. Especially useful are emissions produced from two stable red and far-red chlorophyll ChlF peaks centered at 685V10 nm and 735V5 nm. Methods have been developed elsewhere to extract steady state solar induced fluorescence (SF) from apparent reflectance of vegetation canopies/landscapes using the Fraunhofer Line Depth (FLD) principal. Our study utilized these methods in conjunction with field-acquired high spectral resolution canopy reflectance spectra obtained in 2004 and 2005 over corn crops, as part of an ongoing multi-year experiment at the USDA/Agriculture Research Service in Beltsville, MD. A spectroradiometer (ASD-FR Fieldspec Pro, Analytical Spectral Devices, Inc., Boulder, CO) was used to measure canopy radiances 1 m above plant canopies with a 22deg field of view and a 0deg nadir view zenith angle. Canopy and plant measurements were made at the R3 grain fill reproductive stage on 3-4 replicate N application plots provided seasonal inputs of 280, 140, 70, and 28 kg N/ha. Leaf level measurements were also made which included ChlF, photosynthesis, and leaf constituents (photosynthetic pigment, carbon (C), and N contents). Crop yields were determined at harvest. SIF intensities for ChlF were derived directly from canopy reflectance spectra in specific narrowband regions associated with atmospheric oxygen absorption features centered at 688 and 760 nm. The red/far-red S F ratio derived from these field reflectance spectra successfully discriminated foliar pigment levels (e.g., total chlorophyll, Chl) associated with N application rates in both corn crops. This canopy-level spectral ratio was also

  6. Ozone Flux Measurement and Modelling on Leaf/Shoot and Canopy Scale

    Directory of Open Access Journals (Sweden)

    Giacomo Gerosa

    2011-02-01

    Full Text Available The quantitative study of the ozone effects on agricultural and forest vegetation requires the knowledge of the pollutant dose absorbed by plants via leaf stomata, i.e. the stomatal flux. Nevertheless, the toxicologically effective dose can differ from the stomatal flux because a pool of scavenging and detoxification processes reduce the amount of pollutant responsible of the expression of the harmful effects. The measurement of the stomatal flux is not immediate and the quantification of the effective dose is still troublesome. The paper examines the conceptual aspects of ozone flux measurement and modelling in agricultural and ecological research. The ozone flux paradigm is conceptualized into a toxicological frame and faced at two different scales: leaf/shoot and canopy scales. Leaf and shoot scale flux measurements require gas-exchange enclosure techniques, while canopy scale flux measurements need a micrometeorological approach including techniques such as eddy covariance and the aerodynamical gradient. At both scales, not all the measured ozone flux is stomatal flux. In fact, a not negligible amount of ozone is destroyed on external plant surfaces, like leaf cuticles, or by gas phase reaction with biogenic volatile compounds. The stomatal portion of flux can be calculated from concurrent measurements of water vapour fluxes at both scales. Canopy level flux measurements require very fast sensors and the fulfilment of many conditions to ensure that the measurements made above the canopy really reflect the canopy fluxes (constant flux hypothesis. Again, adjustments are necessary in order to correct for air density fluctuations and sensor-surface alignment break. As far as regards flux modelling, at leaf level the stomatal flux is simply obtained by multiplying the ozone concentration on the leaf with the stomatal conductance predicted by means of physiological models fed by meteorological parameter. At canopy level the stomatal flux is

  7. Ozone Flux Measurement and Modelling on Leaf/Shoot and Canopy Scale

    Directory of Open Access Journals (Sweden)

    Ludger Grünhage

    2008-03-01

    Full Text Available The quantitative study of the ozone effects on agricultural and forest vegetation requires the knowledge of the pollutant dose absorbed by plants via leaf stomata, i.e. the stomatal flux. Nevertheless, the toxicologically effective dose can differ from the stomatal flux because a pool of scavenging and detoxification processes reduce the amount of pollutant responsible of the expression of the harmful effects. The measurement of the stomatal flux is not immediate and the quantification of the effective dose is still troublesome. The paper examines the conceptual aspects of ozone flux measurement and modelling in agricultural and ecological research. The ozone flux paradigm is conceptualized into a toxicological frame and faced at two different scales: leaf/shoot and canopy scales. Leaf and shoot scale flux measurements require gas-exchange enclosure techniques, while canopy scale flux measurements need a micrometeorological approach including techniques such as eddy covariance and the aerodynamical gradient. At both scales, not all the measured ozone flux is stomatal flux. In fact, a not negligible amount of ozone is destroyed on external plant surfaces, like leaf cuticles, or by gas phase reaction with biogenic volatile compounds. The stomatal portion of flux can be calculated from concurrent measurements of water vapour fluxes at both scales. Canopy level flux measurements require very fast sensors and the fulfilment of many conditions to ensure that the measurements made above the canopy really reflect the canopy fluxes (constant flux hypothesis. Again, adjustments are necessary in order to correct for air density fluctuations and sensor-surface alignment break. As far as regards flux modelling, at leaf level the stomatal flux is simply obtained by multiplying the ozone concentration on the leaf with the stomatal conductance predicted by means of physiological models fed by meteorological parameter. At canopy level the stomatal flux is

  8. Premature loss of bone remodeling compartment canopies is associated with deficient bone formation

    DEFF Research Database (Denmark)

    Jensen, Pia Rosgaard; Andersen, Thomas Levin; Søe, Kent;

    2011-01-01

    A remarkable property of bone remodeling is that osteoblasts form bone matrix exactly where and when osteoclasts have removed it. The bone remodeling compartment (BRC) canopies that cover bone surfaces undergoing remodeling, were proposed to be critical players in this mechanism. Here, we provide...... support to this hypothesis by analyzing the changes in prevalence of BRC canopies during the progress of the remodeling cycle in a cohort of healthy individuals and in patients with endogenous Cushing's syndrome (CS), and by relating these changes in prevalence with the extent of bone forming surfaces...

  9. Mapping forest canopy fuels in Yellowstone National Park using lidar and hyperspectral data

    Science.gov (United States)

    Halligan, Kerry Quinn

    The severity and size of wildland fires in the forested western U.S have increased in recent years despite improvements in fire suppression efficiency. This, along with increased density of homes in the wildland-urban interface, has resulted in high costs for fire management and increased risks to human health, safety and property. Crown fires, in comparison to surface fires, pose an especially high risk due to their intensity and high rate of spread. Crown fire models require a range of quantitative fuel parameters which can be difficult and costly to obtain, but advances in lidar and hyperspectral sensor technologies hold promise for delivering these inputs. Further research is needed, however, to assess the strengths and limitations of these technologies and the most appropriate analysis methodologies for estimating crown fuel parameters from these data. This dissertation focuses on retrieving critical crown fuel parameters, including canopy height, canopy bulk density and proportion of dead canopy fuel, from airborne lidar and hyperspectral data. Remote sensing data were used in conjunction with detailed field data on forest parameters and surface reflectance measurements. A new method was developed for retrieving Digital Surface Model (DSM) and Digital Canopy Models (DCM) from first return lidar data. Validation data on individual tree heights demonstrated the high accuracy (r2 0.95) of the DCMs developed via this new algorithm. Lidar-derived DCMs were used to estimate critical crown fire parameters including available canopy fuel, canopy height and canopy bulk density with linear regression model r2 values ranging from 0.75 to 0.85. Hyperspectral data were used in conjunction with Spectral Mixture Analysis (SMA) to assess fuel quality in the form of live versus dead canopy proportions. Severity and stage of insect-caused forest mortality were estimated using the fractional abundance of green vegetation, non-photosynthetic vegetation and shade obtained from

  10. Travelling waves above the canopy of aquatic vegetation

    Science.gov (United States)

    Lyubimov, D.; Lyubimova, T.; Baidina, D.

    2012-04-01

    When fluid moves over a saturated porous medium with high permeability and porosity, the flow partially involves the fluid in porous medium, however, because of the great resistance force there arises sharp drop of tangential velocity. This leads to the development of instability similar to the Kelvin-Helmholtz instability on discontinuity surface of the tangential velocities of homogeneous fluids. Analogy becomes even more complete if we take into account the deformability of porous medium under the influence of pressure changes. Intensive vortices above the canopy of aquatic vegetation can lead to the coherent oscillations of vegetation, such traveling waves are called monami [1]. In the present paper we investigate stability of steady flow over a saturated porous medium. The importance of this problem is related to the applications to the dynamics of pollutants in the bottom layer of vegetation: the accumulation at low flow and salvo emissions with increasing velocity. We consider a two-layer system consisting of a layer of a viscous incompressible fluid and porous layer saturated with the same fluid located underneath. The lower boundary of the system is assumed to be rigid, the upper boundary - free and non-deformable. Weak slope of the river is taken into account. The problem is solved within the framework of single approach in which a two-layer system is described by a single system of equations for saturated porous medium and the presence of two layers is modeled by introducing variable permeability and porosity, depending on vertical coordinate. The flow in a saturated porous medium is described by the Brinkman model. Solution of the problem for steady flow shows that the velocity profile has two inflection points, which leads to the instability. The neutral curves are obtained for different values of the ratio d of porous layer thickness to full thickness. It is found that the dependence of critical Reynolds number on d is non-monotonic and the wave

  11. Scaling up Semi-Arid Grassland Biochemical Content from the Leaf to the Canopy Level: Challenges and Opportunities

    Directory of Open Access Journals (Sweden)

    Amy Mui

    2010-12-01

    Full Text Available Remote sensing imagery is being used intensively to estimate the biochemical content of vegetation (e.g., chlorophyll, nitrogen, and lignin at the leaf level. As a result of our need for vegetation biochemical information and our increasing ability to obtain canopy spectral data, a few techniques have been explored to scale leaf-level biochemical content to the canopy level for forests and crops. However, due to the contribution of non-green materials (i.e., standing dead litter, rock, and bare soil from canopy spectra in semi-arid grasslands, it is difficult to obtain information about grassland biochemical content from remote sensing data at the canopy level. This paper summarizes available methods used to scale biochemical information from the leaf level to the canopy level and groups these methods into three categories: direct extrapolation, canopy-integrated approach, and inversion of physical models. As for semi-arid heterogeneous grasslands, we conclude that all methods are useful, but none are ideal. It is recommended that future research should explore a systematic upscaling framework which combines spatial pattern analysis, canopy-integrated approach, and modeling methods to retrieve vegetation biochemical content at the canopy level.

  12. Dynamics of leaf area index and canopy openness of three forest types in a warm temperate zone

    Institute of Scientific and Technical Information of China (English)

    Weiguo SANG; Sha CHEN; Guangqi LI

    2008-01-01

    Deciduous broad-leaved forests (DBF), Larix principis-rupprechtii (LF) and Pinus tabulaeformis planta-tions (PF) are three typical forest communities in the warm temperate zone of the Dongling Mountains. In this study, we used an indirect method, hemispheric pho-tography, to measure and analyze the dynamics of leaf area index (LAI) and canopy openness of the three forest communities. The results show that the LAI values of DBF and LF increased gradually with plant growth and development. The highest LAI value appeared in August, while canopy openness changed inversely with LAI. The lowest value appeared in November. DBF maintained a higher LAI in August and had a more open canopy in November compared with LF. For PF, we observed little changes in the LAI and canopy openness which was attributed to the leaf retention of this evergreen species. However, a similar relation between LAI and canopy openness was found for the three forest communities: canopy openness varied inversely with LAI. The relation is exponential and significant. Therefore, canopy open-ness is a good indicator of LAI in forests. This result can be used to test the validity of the LAI based on remote sensing and to provide a reference for the study of the canopy heterogeneity and its effect. This also benefits modeling for fluxes of carbon, water and energy from the level of the stand to landscape.

  13. A Photogrammetric Workflow for the Creation of a Forest Canopy Height Model from Small Unmanned Aerial System Imagery

    Directory of Open Access Journals (Sweden)

    Philippe Lejeune

    2013-11-01

    Full Text Available The recent development of operational small unmanned aerial systems (UASs opens the door for their extensive use in forest mapping, as both the spatial and temporal resolution of UAS imagery better suit local-scale investigation than traditional remote sensing tools. This article focuses on the use of combined photogrammetry and “Structure from Motion” approaches in order to model the forest canopy surface from low-altitude aerial images. An original workflow, using the open source and free photogrammetric toolbox, MICMAC (acronym for Multi Image Matches for Auto Correlation Methods, was set up to create a digital canopy surface model of deciduous stands. In combination with a co-registered light detection and ranging (LiDAR digital terrain model, the elevation of vegetation was determined, and the resulting hybrid photo/LiDAR canopy height model was compared to data from a LiDAR canopy height model and from forest inventory data. Linear regressions predicting dominant height and individual height from plot metrics and crown metrics showed that the photogrammetric canopy height model was of good quality for deciduous stands. Although photogrammetric reconstruction significantly smooths the canopy surface, the use of this workflow has the potential to take full advantage of the flexible revisit period of drones in order to refresh the LiDAR canopy height model and to collect dense multitemporal canopy height series.

  14. 30 CFR 75.1710-1 - Canopies or cabs; self-propelled diesel-powered and electric face equipment; installation...

    Science.gov (United States)

    2010-07-01

    ... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Canopies or cabs; self-propelled diesel-powered... STANDARDS-UNDERGROUND COAL MINES Miscellaneous § 75.1710-1 Canopies or cabs; self-propelled diesel-powered... this section, all self-propelled diesel-powered and electric face equipment, including shuttle...

  15. Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: NLCD 2001 Tree Canopy

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This tabular data set represents the mean percent tree canopy from the Canopy Layer of the National Land Cover Dataset 2001 (LaMotte and Wieczorek, 2010), compiled...

  16. Sweet Pepper (Capsicum annuum L.) Canopy Photosynthesis Modeling Using 3D Plant Architecture and Light Ray-Tracing

    Science.gov (United States)

    Kim, Jee Hoon; Lee, Joon Woo; Ahn, Tae In; Shin, Jong Hwa; Park, Kyung Sub; Son, Jung Eek

    2016-01-01

    Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L.) with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada). The light curves and A/Ci curve of each layer were measured to parameterize the Farquhar, von Caemmerer, and Berry (FvCB) model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant's photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions. PMID:27667994

  17. Sweet Pepper (Capsicum annuum L. Canopy Photosynthesis Modeling using 3D Plant Architecture and Light Ray-tracing

    Directory of Open Access Journals (Sweden)

    Jee Hoon Kim

    2016-09-01

    Full Text Available Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L. with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada. The light curves and A/Ci curve of each layer were measured to parameterize the Farquhar, von Caemmerer and Berry (FvCB model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant’s photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions.

  18. Sweet Pepper (Capsicum annuum L.) Canopy Photosynthesis Modeling Using 3D Plant Architecture and Light Ray-Tracing.

    Science.gov (United States)

    Kim, Jee Hoon; Lee, Joon Woo; Ahn, Tae In; Shin, Jong Hwa; Park, Kyung Sub; Son, Jung Eek

    2016-01-01

    Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L.) with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada). The light curves and A/C i curve of each layer were measured to parameterize the Farquhar, von Caemmerer, and Berry (FvCB) model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant's photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions.

  19. Canopy and physiological controls of GPP during drought and heat wave

    Science.gov (United States)

    Zhang, Yao; Xiao, Xiangming; Zhou, Sha; Ciais, Philippe; McCarthy, Heather; Luo, Yiqi

    2016-04-01

    Vegetation indices (VIs) derived from satellite reflectance measurements are often used as proxies of canopy activity to evaluate the impacts of drought and heat wave on gross primary production (GPP) through production efficiency models. However, GPP is also regulated by physiological processes that cannot be directly detected using reflectance measurements. This study analyzes the co-limitation of canopy and plant physiology (represented by VIs and climate anomalies, respectively) on GPP during the 2003 European summer drought and heat wave for 15 Euroflux sites. During the entire drought period, spatial pattern of GPP anomalies can be quantified by relative changes in VIs. We also find that GPP sensitivity to relative canopy changes is higher for nonforest ecosystems (1.81 ± 0.32%GPP/%enhanced vegetation index), while GPP sensitivity to physiological changes is higher for forest ecosystems (-0.18 ± 0.05 g C m-2 d-1/hPa). A conceptual model is further built to better illustrate the canopy and physiological controls on GPP during drought periods.

  20. A comparative analysis of simulated and observed photosynthetic CO2 uptake in two coniferous forest canopies

    DEFF Research Database (Denmark)

    Ibrom, A.; Jarvis, P.G.; Clement, R.

    2006-01-01

    uptake rates were a slightly smaller quantum yield and lower absorptance of the Norway spruce stand because of a more clumped canopy structure. The model did not represent the scatter in the turbulent CO2 flux densities, which was of the same order of magnitude as the non-photosynthetically...

  1. Testing the Application of Terrestrial Laser Scanning to Measure Forest Canopy Gap Fraction

    Directory of Open Access Journals (Sweden)

    F. Mark Danson

    2013-06-01

    Full Text Available Terrestrial laser scanners (TLS have the potential to revolutionise measurement of the three-dimensional structure of vegetation canopies for applications in ecology, hydrology and climate change. This potential has been the subject of recent research that has attempted to measure forest biophysical variables from TLS data, and make comparisons with two-dimensional data from hemispherical photography. This research presents a systematic comparison between forest canopy gap fraction estimates derived from TLS measurements and hemispherical photography. The TLS datasets used in the research were obtained between April 2008 and March 2009 at Delamere Forest, Cheshire, UK. The analysis of canopy gap fraction estimates derived from TLS data highlighted the repeatability and consistency of the measurements in comparison with those from coincident hemispherical photographs. The comparison also showed that estimates computed considering only the number of hits and misses registered in the TLS datasets were consistently lower than those estimated from hemispherical photographs. To examine this difference, the potential information available in the intensity values recorded by TLS was investigated and a new method developed to estimate canopy gap fraction proposed. The new approach produced gap fractions closer to those estimated from hemispherical photography, but the research also highlighted the limitations of single return TLS data for this application.

  2. Quantifying energy and mass transfer in crop canopies: sensors for measurement of temperature and air velocity

    Science.gov (United States)

    Bugbee, B.; Monje, O.; Tanner, B.

    1996-01-01

    Here we report on the in situ performance of inexpensive, miniature sensors that have increased our ability to measure mass and energy fluxes from plant canopies in controlled environments: 1. Surface temperature. Canopy temperature measurements indicate changes in stomatal aperture and thus latent and sensible heat fluxes. Infrared transducers from two manufacturers (Exergen Corporation, Newton, MA; and Everest Interscience, Tucson, AZ, USA) have recently become available. Transducer accuracy matched that of a more expensive hand-held infrared thermometer. 2. Air velocity varies above and within plant canopies and is an important component in mass and energy transfer models. We tested commercially-available needle, heat-transfer anemometers (1 x 50 mm cylinder) that consist of a fine-wire thermocouple and a heater inside a hypodermic needle. The needle is heated and wind speed determined from the temperature rise above ambient. These sensors are particularly useful in measuring the low wind speeds found within plant canopies. 3. Accurate measurements of air temperature adjacent to plant leaves facilitates transport phenomena modeling. We quantified the effect of radiation and air velocity on temperature rise in thermocouples from 10 to 500 micrometers. At high radiation loads and low wind speeds, temperature errors were as large as 7 degrees C above air temperature.

  3. Functional and biological diversity of foliar spectra in tree canopies throughout the Andes to Amazon region.

    Science.gov (United States)

    Asner, Gregory P; Martin, Roberta E; Carranza-Jiménez, Loreli; Sinca, Felipe; Tupayachi, Raul; Anderson, Christopher B; Martinez, Paola

    2014-10-01

    Spectral properties of foliage express fundamental chemical interactions of canopies with solar radiation. However, the degree to which leaf spectra track chemical traits across environmental gradients in tropical forests is unknown. We analyzed leaf reflectance and transmittance spectra in 2567 tropical canopy trees comprising 1449 species in 17 forests along a 3400-m elevation and soil fertility gradient from the Amazonian lowlands to the Andean treeline. We developed quantitative links between 21 leaf traits and 400-2500-nm spectra, and developed classifications of tree taxa based on spectral traits. Our results reveal enormous inter-specific variation in spectral and chemical traits among canopy trees of the western Amazon. Chemical traits mediating primary production were tightly linked to elevational changes in foliar spectral signatures. By contrast, defense compounds and rock-derived nutrients tracked foliar spectral variation with changing soil fertility in the lowlands. Despite the effects of abiotic filtering on mean foliar spectral properties of tree communities, the spectra were dominated by phylogeny within any given community, and spectroscopy accurately classified 85-93% of Amazonian tree species. Our findings quantify how tropical tree canopies interact with sunlight, and indicate how to measure the functional and biological diversity of forests with spectroscopy.

  4. Remotely sensed estimation of forest canopy density: A comparison of the performance of four methods

    NARCIS (Netherlands)

    Joshi, C.; Leeuw, de J.; Skidmore, A.K.; Duren, van I.C.; Oosten, van H.

    2006-01-01

    In recent years, a number of alternative methods have been proposed to predict forest canopy density from remotely sensed data. To date, however, it remains difficult to decide which method to use, since their relative performance has never been evaluated. In this study the performance of: (1) an ar

  5. The effects of the canopy created velocity inflection in the wake development

    Science.gov (United States)

    Agafonova, O.; Avramenko, A.; Chaudhari, A.; Hellsten, A.

    2016-06-01

    The aim of this paper is to study the effects of forest on the turbine wakes. Initially, the ACL (actuator line) model as well as a Canopy model are validated with the experiments separately. The models are further applied to simulate the flow over two wind turbines in a row located within the forest.

  6. Spatial and diurnal below canopy evaporation in a desert vineyard: measurements and modeling

    Science.gov (United States)

    Evaporation from the soil surface (E) can be a significant source of water loss in arid areas. In sparsely vegetated systems, E is expected to be a function of soil, climate, irrigation regime, precipitation patterns, and plant canopy development, and will therefore change dynamically at both daily ...

  7. Regeneration in bottomland forest canopy gaps six years after variable retention harvests to enhance wildlife habitat

    Science.gov (United States)

    Twedt, Daniel J.; Somershoe, Scott G.; Guldin, James M.

    2013-01-01

    To promote desired forest conditions that enhance wildlife habitat in bottomland forests, managers prescribed and implemented variable-retention harvest, a.k.a. wildlife forestry, in four stands on Tensas River National Wildlife Refuge, LA. These treatments created canopy openings (gaps) within which managers sought to regenerate shade-intolerant trees. Six years after prescribed harvests, we assessed regeneration in 41 canopy gaps and 4 large (>0.5-ha) patch cut openings that resulted from treatments and in 21 natural canopy gaps on 2 unharvested control stands. Mean gap area of anthropogenic gaps (582 m²) was greater than that of natural gaps (262 m²). Sweetgum (Liquidambar styraciflua) and red oaks (Quercus nigra, Q. nuttallii, and Q. phellos) were common in anthropogenic gaps, whereas elms (Ulmus spp.) and sugarberry (Celtis laevigata) were numerous in natural gaps. We recommend harvest prescriptions include gaps with diameter >25 m, because the proportion of shade-intolerant regeneration increased with gap area up to 500 m². The proportion of shade-intolerant definitive gap fillers (individuals likely to occupy the canopy) increased with gap area: 35 percent in natural gaps, 54 percent in anthropogenic gaps, and 84 percent in patch cuts. Sweetgum, green ash (Fraxinus pennsylvanica), and red oaks were common definitive gap fillers.

  8. Predicting Nitrogen Status of Rice Using Multispectral Data at Canopy Scale

    Institute of Scientific and Technical Information of China (English)

    ZHANG Jin-Heng; WANG Ke; J. S. BAILEY; WANG Ren-Chao

    2006-01-01

    Two field experiments were conducted in Jiashan and Yuhang towns of Zhejiang Province, China, to study the feasibility of predicting N status of rice using canopy spectral reflectance. The canopy spectral reflectance of rice grown with different levels of N inputs was determined at several important growth stages. Statistical analyses showed that as a result of the different levels of N supply, there were significant differences in the N concentrations of canopy leaves at different growth stages. Since spectral reflectance measurements showed that the N status of rice was related to reflectance in the visible and NIR (near-infrared) ranges, observations for rice in 1 nm bandwidths were then converted to bandwidths in the visible and NIR spectral regions with IKONOS (space imaging) bandwidths and vegetation indices being used to predict the N status of rice. The results indicated that canopy reflectance measurements converted to ratio vegetation index (RVI) and normalized difference vegetation index (NDVI) for simulated IKONOS bands provided a better prediction of rice N status than the reflectance measurements in the simulated IKONOS bands themselves. The precision of the developed regression models using RVI and NDVI proved to be very high with R2 ranging from 0.82 to 0.94, and when validated with experimental data from a different site, the results were satisfactory with R2 ranging from 0.55 to 0.70.Thus, the results showed that theoretically it should be possible to monitor N status using remotely sensed data.

  9. Energy budget closure and field scale estimation of canopy energy storage with increased and sustained turbulence

    Science.gov (United States)

    Anderson, R. G.; Wang, D.

    2012-12-01

    Eddy Covariance (EC) is widely used for direct, non-invasive observations of land-atmosphere energy and mass fluxes. However, EC observations of available energy fluxes are usually less than fluxes inferred from radiometer and soil heat flux observations; thus introducing additional uncertainty in using and interpreting EC flux measurements. We compare EC observations from two towers established over sugarcane (Saccharum officinarum L.) in Hawai'i, USA under similar cultivation, temperature, sunlight, and precipitation, but drastically different wind conditions due to orographic effects. At a daily scale, we find that energy closure for both towers occurs on days when the entire 24 hours has sufficient turbulence. At our windier site, this turbulence condition occurs over 60% of the time, which contributes to substantially better daily energy closure (~98%) than at the calmer site (~75%). At our windy site, we then invert the daily energy closure for continuously windy days to calculate canopy energy storage. At full canopy, peak daily canopy energy storage fluxes (200-400 Wm-2) are approximately an order of magnitude larger than soil heat flux (20-40 Wm-2). As a fraction of net radiation, canopy energy storage appears to vary seasonally and shows substantially greater variability than soil heat flux. The results illustrate the importance of sustained turbulence for accurate, direct measurement of land-atmosphere fluxes. As increasing number of EC towers are established in complex terrain, these results indicate the need for preliminary wind studies to optimize tower placement where orography enhances, rather than suppresses, turbulence.

  10. A Note on Two-Equation Closure Modelling of Canopy Flow

    DEFF Research Database (Denmark)

    Sogachev, Andrey

    2009-01-01

    The note presents a rational approach to modelling the source/sink due to vegetation or buoyancy effects that appear in the turbulent kinetic energy, E, equation and a supplementary equation for a length-scale determining variable, φ, when two-equation closure is applied to canopy and atmospheric...

  11. Modifying the University of Missouri corn canopy sensor algorithm using soil and weather information

    Science.gov (United States)

    Corn production across the U.S. Corn belt can be often limited by the loss of nitrogen (N) due to leaching, volatilization and denitrification. The use of canopy sensors for making in-season N fertilizer applications has been proven effective in matching plant N requirements with periods of rapid N ...

  12. TEMPERATURE EFFECT ON GROWTH AND DEVELOPMENT INDICES IN UNIFORM AND HETEROGENEOUS RED CLOVER CANOPIES

    Directory of Open Access Journals (Sweden)

    D. DUNEA

    2013-12-01

    Full Text Available The aim of this study was to assess the temperature effect on growth and development parameters in uniform (pure culture and heterogeneous (grass-clover mixture red clover canopies with or without foliar fertilization in the most productive year of red clover. The relationships between biological efficiency (εb, Leaf Area Index (LAI, canopy height growth (Hts, light environment (PAR and temperature in uniform and mixed canopies for both clover ploidy groups are presented. The temperature effect on red clover LAI corresponded to a non-linear sigmoid function. The second foliar fertilizer application had a major effect on leaf area development in uniform canopies. Both ploidy groups had a similar LAI growth trend and favorable responses to foliar fertilization. The correlation between leaf area growth and temperature was statistically significant (p<0.05 for red clover cultivars in the unfertilized grass-clover mixtures. The hybrid ryegrass showed higher regression coefficients in tetraploid clover mixtures (p<0.01. Foliar fertilization determined the smoothing of species behaviors to the temperature regime meaning that the differences between diploids and tetraploids, and between hybrid ryegrass from both variants were less visible.

  13. Integrating soil and weather information into canopy sensor algorithms for improved corn nitrogen rate recommendation

    Science.gov (United States)

    Corn production can be often limited by the loss of nitrogen (N) due to leaching, volatilization and denitrification. The use of canopy sensors for making in-season N fertilizer applications has been proven effective in matching plant N requirements with periods of rapid N uptake (V7-V11), reducing ...

  14. Use Of Crop Canopy Size To Estimate Water Requirements Of Vegetable Crops

    Science.gov (United States)

    Planting time, plant density, variety, and cultural practices vary widely for horticultural crops. It is difficult to estimate crop water requirements for crops with these variations. Canopy size, or factional ground cover, as an indicator of intercepted sunlight, is related to crop water use. We...

  15. Canopy cover and leaf area index relationships for wheat, triticale, and corn

    Science.gov (United States)

    The AquaCrop model requires canopy cover (CC) measurements to define crop growth and development. Some previously collected data sets that would be useful for calibrating and validating AquaCrop contain only leaf area index (LAI) data, but could be used if relationships were available relating LAI t...

  16. Contribution of lianas to plant area index and canopy structure in a Panamanian forest.

    Science.gov (United States)

    Rodríguez-Ronderos, M Elizabeth; Bohrer, Gil; Sanchez-Azofeifa, Arturo; Powers, Jennifer S; Schnitzer, Stefan A

    2016-12-01

    Lianas are an important component of tropical forests, where they reduce tree growth, fecundity, and survival. Competition for light from lianas may be intense; however, the amount of light that lianas intercept is poorly understood. We used a large-scale liana-removal experiment to quantify light interception by lianas in a Panamanian secondary forest. We measured the change in plant area index (PAI) and forest structure before and after cutting lianas (for 4 yr) in eight 80 m × 80 m plots and eight control plots (16 plots total). We used ground-based LiDAR to measure the 3-dimensional canopy structure before cutting lianas, and then annually for 2 yr afterwards. Six weeks after cutting lianas, mean plot PAI was 20% higher in control vs. liana removal plots. One yr after cutting lianas, mean plot PAI was ~17% higher in control plots. The differences between treatments diminished significantly 2 yr after liana cutting and, after 4 yr, trees had fully compensated for liana removal. Ground-based LiDAR revealed that lianas attenuated light in the upper- and middle-forest canopy layers, and not only in the upper canopy as was previously suspected. Thus, lianas compete with trees by intercepting light in the upper- and mid-canopy of this forest.

  17. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain

    NARCIS (Netherlands)

    Bischof, K; Peralta, G; Krabs, G; van de Poll, WH; Perez-Llorens, JL; Breeman, AM

    2002-01-01

    Within the sheltered creeks of Cadiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA d

  18. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain

    NARCIS (Netherlands)

    Bischof, K.; Peralta, G.; Kräbs, G.; van de Poll, W.H.; Lucas Pérez-Lloréns, J.; Breeman, A.M.

    2002-01-01

    Within the sheltered creeks of Cádiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA d

  19. Soil morphology of canopy and intercanopy sites in a pinon-Juniper woodland

    Energy Technology Data Exchange (ETDEWEB)

    Davenport, D.W.; Wilcox, B.P.; Breshear, D.D. [Los Alamos National Lab., NM (United States)

    1996-11-01

    Pinon-juniper woodlands in the semiarid western USA have expanded as much as fivefold during the last 150 yr, often accompanied by losses of understory vegetation and increasing soil erosion. We conducted this study to determine the differences in soil morphology between canopy and intercanopy locations within a pinon (Pinus edulis Engelm.)-juniper [Juniperus monosperma (Engelm.) Sarg.] woodland with uniform parent material, topography, and climate. The woodland studied, located near Los Alamos, NM, has a mean tree age of 135 yr. We examined soil morphology by augering 135 profiles in a square grid pattern and comparing soils under pinon and juniper canopies with intercanopy soils. Only two of the 17 morphological properties compared showed significant differences. The B horizons make up a slightly greater proportion of total profile thickness in intercanopy soils, and there are higher percentages of coarse fragments in the lower portions of canopy soil profiles. Canopy soils have lower mean pH and higher mean organic C than intercanopy soils. Regression analysis showed that most soil properties did not closely correspond with tree size, but total soil thickness and B horizon thickness are significantly greater under the largest pinon trees, and soil reaction is lower under the largest juniper trees. Our findings suggest that during the period in which pinon-juniper woodlands have been expanding, the trees have had only minor effects on soil morphology. 36 refs., 4 figs., 4 tabs.

  20. Quantitative forest canopy structure assessment using an inverted geometric-optical model and up-scaling

    NARCIS (Netherlands)

    Zeng, Y.; Schaepman, M.E.; Wu, B.; Clevers, J.G.P.W.; Bregt, A.K.

    2009-01-01

    The physical-based geometric-optical Li-Strahler model can be inverted to retrieve forest canopy structural variables. One of the main input variables of the inverted model is the fractional component of sunlit background (K g). K g is calculated by using pure reflectance spectra (endmembers) of the

  1. Comparison of deep percolation rates below contrasting land covers with a joint canopy and soil model

    Science.gov (United States)

    Domínguez, C. G.; Pryet, A.; García Vera, M.; Gonzalez, A.; Chaumont, C.; Tournebize, J.; Villacis, M.; d'Ozouville, N.; Violette, S.

    2016-01-01

    A Rutter-type canopy interception model is combined with a 1-D physically-based soil water flow model to compare deep percolation rates below distinct land covers. The joint model allows the quantification of both evaporation and transpiration rates as well as deep percolation from vegetation and soil characteristics. Experimental observations are required to constitute the input and calibration datasets. An appropriate monitoring design is described which consists in meteorological monitoring together with throughfall and soil water tension measurements. The methodology is illustrated in Santa Cruz Island in the Galapagos Archipelago, which has been affected by significant land use changes. Two adjacent study plots are investigated: a secondary forest and a pasture. The results of the model reveal that evaporation of canopy interception is higher in the pasture due to the bigger canopy storage capacity, which promotes evaporation against canopy drainage. This is however compensated by higher transpiration in the secondary forest, due to the smaller surface resistance. As a consequence, total evapotranspiration is similar for the two plots and no marked difference in deep percolation can be observed. In both cases, deep percolation reaches ca. 2 m/year which corresponds to 80% of the incoming rainfall. This methodology not only allows the quantification of deep percolation, but can also be used to identify the controlling factors of deep percolation under contrasting land covers.

  2. The gap probability model for canopy thermal infrared emission with non-scattering approximation

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    To describe canopy emitting thermal radiance precisely and physically is one of the key researches in retrieving land surface temperature (LST) over vegetation-covered regions by remote sensing technology.This work is aimed at establishing gap probability models to describe the thermal emission characteristics in continuous plant,including the basic model and the sunlit model.They are suitable respectively in the nighttime and in the daytime.The sunlit model is the basic model plus a sunlit correcting item which takes the hot spot effect into account.The researches on the directional distribution of radiance and its relationship to canopy structural parameters,such as the leaf area index (LAI) and leaf angle distribution (LAD),were focused.The characteristics of directional radiance caused by temperature differences among components in canopy,such as those between leaf and soil,and between sunlit leaf or soil and shadowed leaf or soil,were analyzed.A well fitting between experimental data and the theoretical calculations shows that the models are able to illustrate the canopy thermal emission generally.

  3. Efficiency of light energy used by leaves situated in different levels of a sweet pepper canopy

    NARCIS (Netherlands)

    Dueck, T.A.; Grashoff, C.; Broekhuijsen, A.G.M.; Marcelis, L.F.M.

    2006-01-01

    In order to make the most use of the available light in glasshouse crops, measurements of light penetration, leaf photosynthesis, respiration and transpiration were performed at five levels in a sweet paper canopy at two commercial farms, from July to November 2004. Light response curves of leaf pho

  4. What is the most prominent factor limiting photosynthesis in different layers of a greenhouse cucumber canopy?

    NARCIS (Netherlands)

    Chen, T.W.; Henke, M.; Visser, de P.H.B.; Buck-Sorlin, G.H.; Wiechers, D.; Kahlen, K.; Stützel, H.

    2014-01-01

    Background and Aims Maximizing photosynthesis at the canopy level is important for enhancing crop yield, and this requires insights into the limiting factors of photosynthesis. Using greenhouse cucumber (Cucumis sativus) as an example, this study provides a novel approach to quantify different compo

  5. Basement-driven strike-slip deformation involving a salt-stock canopy system

    Science.gov (United States)

    Dooley, Tim; Jackson, Martin; Hudec, Mike

    2016-04-01

    NW-striking basement-involved strike-slip zones have been reported or inferred from the northern Gulf of Mexico (GoM). This interpretation is uncertain, because the effects of strike-slip deformation are commonly difficult to recognize in cross sections. Recognition is doubly difficult if the strike-slip zone passes through a diapir field that complicates deformation, and an associated salt canopy that partially decouples shallow deformation from deep deformation. We use physical models to explore the effects of strike-slip deformation above and below a salt-stock canopy system. Canopies of varying maturity grew from a series of 14 feeders/diapirs located on and off the axis of a dextral basement fault. Strike-slip deformation styles in the overburden vary significantly depending on: (1) the location of the diapirs with respect to the basement fault trace, and; (2) the continuity of the canopy system. On-axis diapirs (where the diapirs lie directly above the basement fault) are typically strongly deformed and pinched shut at depth to form sharp S-shapes, whereas their shallow deformation style is that of a open-S-shaped pop-up structure in a restraining bend. The narrow diapir stem acts as a shear zone at depth. Pull-apart structures form between diapirs that are arranged in a right-stepping array tangental to the basement fault trace. These grade along strike into narrow negative flower structures. Off-axis diapirs (diapirs laterally offset from the basement fault but close enough to participate in the deformation) form zones of distributed deformation in the form of arrays of oblique faults (R shears) that converge along strike onto the narrower deformation zones associated with on-axis diapirs. Above an immature, or patchy, canopy system the strike-slip structures closely match sub canopy structures, with the exception of wrench fold formation where the supracanopy roof is thin. In contrast, the surface structures above a mature canopy system consist of a broad

  6. Soil properties in forest gaps and under canopy in broad-leaved Pinus koraiensis forests in Changbai Mountainous Region, China

    Institute of Scientific and Technical Information of China (English)

    ZHANG Chunyu; ZHAO Xiuhai

    2007-01-01

    The species composition and diversities,and soil properties under canopy gaps in broad-leaved Pinus koraiensis forests were studied in the Changbai Mountains.The results indicated that the species composition and diversifies in gap were different from those under canopy.The Shannon-Wiener index,evenness index,and abundance index in gap were higher than those under canopy in the seedling layer,while the community dominance in the seedling layer increased in closed canopy.The physicochemical properties of soil changed with the change of space and resource availability in gaps.The thickness,standing crop,and water holding capacity of the litter layer under canopy were significantly (p < 0.01) higher than those in gap.The content of total nitrogen and total potassium of litter in gap were 10.47% and 20.73% higher than those under canopy,however,the content of total phosphorus and organic carbon under canopy were 15.23% and 12.66% more than those under canopy.The water content of 0-10 cm and 10-20 cm of soil layer in gap were 17.65% and 16.17% more than those under canopy.The soil buck density of 0-10 cm were slightly higher under canopy than that in gaps,but there was no significant difference in the soil buck density of the 10-20 cm soil layer.The soil pH values were 5.80 and 5.85 in gap and under canopy,respectively,and were not significantly different.The content of soil organic matter,total nitrogen,and total potassium in gap were 12.85%,7.67%,and 2.38% higher than those under canopy.The content of NH4+-N,available phosphorus,available potassium,and total phosphorus in soil under canopy were 13.33%,20.04%,16.52%,and 4.30% higher than those in gap.

  7. Can we use photography to estimate radiation interception by a crop canopy?

    Science.gov (United States)

    Chakwizira, E; Meenken, E D; George, M J; Fletcher, A L

    2015-03-01

    Accuracy of determining radiation interception, and hence radiation use efficiency, depends on the method of measuring photosynthetically active radiation intercepted. Methods vary, from expensive instruments such as Sunfleck ceptometers to simple methods such as digital photography. However, before universal use of digital photography there is need to determine its reliability and compare it with conventional, but expensive, methods. In a series of experiments at Lincoln, New Zealand, canopy development for barley, wheat, white clover and four forage brassica species was determined using both digital photographs and Sunfleck ceptometer. Values obtained were used to calculate conversion coefficient (Kf/Ki) ratios between the two methods. Digital photographs were taken at 45° and 90° for barley, wheat and white clover and at only 90° for brassicas. There was an interaction of effects of crop and cultivar for the cereal crops. Barley closed canopies earlier than wheat, and 'Emir' barley and 'Stettler' wheat had consistently higher canopy cover than 'Golden Promise' and 'HY459', respectively. Canopy cover was consistently larger at 45° than 90° for cereals. However, for white clover, the angle of digital photography was not important. There was also an interaction between effects of species and method of determining canopy cover for brassicas. Photographs gave higher cover values than ceptometer for forage rape and turnip, but the relationship was variable for forage kale and swede. Kf/Ki ratios of 1.0-1.10 for cereals, white clover and forage rape and turnip show that digital photographs can be used to estimated radiation interception, in place of Sunfleck ceptometer, for these crops.

  8. Effect of smoke and clouds on the transmissivity of photosynthetically active radiation inside the canopy

    Directory of Open Access Journals (Sweden)

    M. A. Yamasoe

    2006-01-01

    Full Text Available Biomass burning activities emit high concentrations of aerosol particles to the atmosphere. Such particles can interact with solar radiation, decreasing the amount of light reaching the surface and increasing the fraction of diffuse radiation through scattering processes, and thus has implications for photosynthesis within plant canopies. This work reports results from photosynthetically active radiation (PAR and aerosol optical depth (AOD measurements conducted simultaneously at Reserva Biológica do Jaru (Rondonia State, Brazil during LBA/SMOCC (Large-Scale Biosphere-Atmosphere Experiment in Amazonia/ Smoke, Aerosols, Clouds, Rainfall, and Climate and RaCCI (Radiation, Cloud, and Climate Interactions in the Amazon during the Dry-to-Wet Transition Season field experiments from 15 September to 15 November 2002. AOD values were retrieved from an AERONET (Aerosol Robotic Network radiometer, MODIS (Moderate Resolution Spectroradiometer and a portable sunphotometer from the United States Department of Agriculture – Forest Service. Significant reduction of PAR irradiance at the top of the canopy was observed due to the smoke aerosol particles layer. This radiation reduction affected turbulent fluxes of sensible and latent heats. The increase of AOD also enhanced the transmission of PAR inside the canopy. As a consequence, the availability of diffuse radiation was enhanced due to light scattering by the aerosol particles. A complex relationship was identified between light availability inside the canopy and net ecosystem exchange (NEE. The results showed that the increase of aerosol optical depth corresponded to an increase of CO2 uptake by the vegetation. However, for even higher AOD values, the corresponding NEE was lower than for intermediate values. As expected, water vapor pressure deficit (VPD, retrieved at 28m height inside the canopy, can also affect photosynthesis. A decrease in NEE was observed as VPD increased. Further studies are needed

  9. Voxel-Based Spatial Filtering Method for Canopy Height Retrieval from Airborne Single-Photon Lidar

    Directory of Open Access Journals (Sweden)

    Hao Tang

    2016-09-01

    Full Text Available Airborne single-photon lidar (SPL is a new technology that holds considerable potential for forest structure and carbon monitoring at large spatial scales because it acquires 3D measurements of vegetation faster and more efficiently than conventional lidar instruments. However, SPL instruments use green wavelength (532 nm lasers, which are sensitive to background solar noise, and therefore SPL point clouds require more elaborate noise filtering than other lidar instruments to determine canopy heights, particularly in daytime acquisitions. Histogram-based aggregation is a commonly used approach for removing noise from photon counting lidar data, but it reduces the resolution of the dataset. Here we present an alternate voxel-based spatial filtering method that filters noise points efficiently while largely preserving the spatial integrity of SPL data. We develop and test our algorithms on an experimental SPL dataset acquired over Garrett County in Maryland, USA. We then compare canopy attributes retrieved using our new algorithm with those obtained from the conventional histogram binning approach. Our results show that canopy heights derived using the new algorithm have a strong agreement with field-measured heights (r2 = 0.69, bias = 0.42 m, RMSE = 4.85 m and discrete return lidar heights (r2 = 0.94, bias = 1.07 m, RMSE = 2.42 m. Results are consistently better than height accuracies from the histogram method (field data: r2 = 0.59, bias = 0.00 m, RMSE = 6.25 m; DRL: r2 = 0.78, bias = −0.06 m and RMSE = 4.88 m. Furthermore, we find that the spatial-filtering method retains fine-scale canopy structure detail and has lower errors over steep slopes. We therefore believe that automated spatial filtering algorithms such as the one presented here can support large-scale, canopy structure mapping from airborne SPL data.

  10. Mapping Urban Tree Canopy Cover Using Fused Airborne LIDAR and Satellite Imagery Data

    Science.gov (United States)

    Parmehr, Ebadat G.; Amati, Marco; Fraser, Clive S.

    2016-06-01

    Urban green spaces, particularly urban trees, play a key role in enhancing the liveability of cities. The availability of accurate and up-to-date maps of tree canopy cover is important for sustainable development of urban green spaces. LiDAR point clouds are widely used for the mapping of buildings and trees, and several LiDAR point cloud classification techniques have been proposed for automatic mapping. However, the effectiveness of point cloud classification techniques for automated tree extraction from LiDAR data can be impacted to the point of failure by the complexity of tree canopy shapes in urban areas. Multispectral imagery, which provides complementary information to LiDAR data, can improve point cloud classification quality. This paper proposes a reliable method for the extraction of tree canopy cover from fused LiDAR point cloud and multispectral satellite imagery data. The proposed method initially associates each LiDAR point with spectral information from the co-registered satellite imagery data. It calculates the normalised difference vegetation index (NDVI) value for each LiDAR point and corrects tree points which have been misclassified as buildings. Then, region growing of tree points, taking the NDVI value into account, is applied. Finally, the LiDAR points classified as tree points are utilised to generate a canopy cover map. The performance of the proposed tree canopy cover mapping method is experimentally evaluated on a data set of airborne LiDAR and WorldView 2 imagery covering a suburb in Melbourne, Australia.

  11. Simultaneous improvement in water use, productivity and albedo through canopy structural modification

    Science.gov (United States)

    Drewry, Darren; Kumar, Praveen; Long, Stephen

    2015-04-01

    Agricultural lands provide a tremendous opportunity to address challenges at the intersection of food and water security and climate change. Global demand for the major grain and seed crops is beginning to outstrip production, while population growth and the expansion of the global middle class have motivated calls for a doubling of food production by the middle of this century. This is occurring as yield gains for the major food crops have stagnated. At current rates of yield improvement this doubling will not be achieved. Plants have evolved to maximize the capture of radiation in the upper leaves, resulting in sub-optimal monoculture crop fields for maximizing productivity and other biogeophysical services. Using the world's most important protein crop, soybean, as an example, we show that by applying numerical optimization to a micrometeorological crop canopy model that significant, simultaneous gains in water use, productivity and reflectivity are possible with no increased demand on resources. Here we apply the MLCan multi-layer canopy biophysical model, which vertically resolves the radiation and micro-environmental variations that stimulate biochemical and ecophysiological functions that govern canopy-atmosphere exchange processes. At each canopy level photosynthesis, stomatal conductance, and energy balance are solved simultaneously for shaded and sunlit foliage. A multi-layer sub-surface model incorporates water availability as a function of root biomass distribution. MLCan runs at sub-hourly temporal resolution, allowing it to capture variability in CO2, water and energy exchange as a function of environmental variability. By modifying total canopy leaf area, its vertical distribution, leaf angle, and shortwave radiation reflectivity, all traits available in most major crop germplasm collections, we show that increases in either productivity (7%), water use (13%) or albedo (34%) could be achieved with no detriment to the other objectives, under climate

  12. Curating and Preserving the Big Canopy Database System: an Active Curation Approach using SEAD

    Science.gov (United States)

    Myers, J.; Cushing, J. B.; Lynn, P.; Weiner, N.; Ovchinnikova, A.; Nadkarni, N.; McIntosh, A.

    2015-12-01

    Modern research is increasingly dependent upon highly heterogeneous data and on the associated cyberinfrastructure developed to organize, analyze, and visualize that data. However, due to the complexity and custom nature of such combined data-software systems, it can be very challenging to curate and preserve them for the long term at reasonable cost and in a way that retains their scientific value. In this presentation, we describe how this challenge was met in preserving the Big Canopy Database (CanopyDB) system using an agile approach and leveraging the Sustainable Environment - Actionable Data (SEAD) DataNet project's hosted data services. The CanopyDB system was developed over more than a decade at Evergreen State College to address the needs of forest canopy researchers. It is an early yet sophisticated exemplar of the type of system that has become common in biological research and science in general, including multiple relational databases for different experiments, a custom database generation tool used to create them, an image repository, and desktop and web tools to access, analyze, and visualize this data. SEAD provides secure project spaces with a semantic content abstraction (typed content with arbitrary RDF metadata statements and relationships to other content), combined with a standards-based curation and publication pipeline resulting in packaged research objects with Digital Object Identifiers. Using SEAD, our cross-project team was able to incrementally ingest CanopyDB components (images, datasets, software source code, documentation, executables, and virtualized services) and to iteratively define and extend the metadata and relationships needed to document them. We believe that both the process, and the richness of the resultant standards-based (OAI-ORE) preservation object, hold lessons for the development of best-practice solutions for preserving scientific data in association with the tools and services needed to derive value from it.

  13. Water-borne hyphomycetes in tree canopies of Kaiga (Western Ghats, India

    Directory of Open Access Journals (Sweden)

    Naga M. Sudheep

    2013-12-01

    Full Text Available The canopy samples such as trapped leaf litter, trapped sediment (during summer, stemflow and throughfall (during monsoon from five common riparian tree species (Artocarpus heterophyllus, Cassia fistula, Ficus recemosa, Syzygium caryophyllatum and Xylia xylocarpa in Kaiga forest stand of the Western Ghats of southwest India were evaluated for the occurrence of water-borne hyphomycetes. Partially decomposed trapped leaf litter was incubated in bubble chambers followed by filtration to assess conidial output. Sediments accumulated in tree holes or junction of branches were shaken with sterile leaf disks in distilled water followed by incubation of leaf disks in bubble chamber and filtration to find out colonized fungi. Stemflow and throughfall samples were filtered directly to collect free conidia. From five canopy niches, a total of 29 water-borne hyphomycetes were recovered. The species richness was higher in stemflow and throughfall than trapped leaf litter and sediments (14-16 vs. 6-10 species. Although sediments of Syzygium caryophyllatum were acidic (5.1, the conidial output was higher than other tree species. Stemflow and throughfall of Xylea xylocarpa even though alkaline (8.5-8.7 showed higher species richness (6-12 species as well as conidial load than rest of the tree species. Flagellospora curvula and Triscelophorus acuminatus were common in trapped leaf litter and sediments respectively, while conidia of Anguillospora crassa and A. longissima were frequent in stemflow and throughfall. Diversity of water-borne hyphomycetes was highest in throughfall of Xylea xylocarpa followed by throughfall of Ficus recemosa. Our study reconfirms the occurrence and survival of diverse water-borne hyphomycetes in different niches of riparian tree canopies of the Western Ghats during wet and dry regimes and predicts their possible role in canopy as saprophytes, endophytes and alternation of life cycle between canopy and aquatic habitats.

  14. EFFECTS OF ELEVATED ATMOSPHERIC CO{sub 2} ON CANOPY TRANSPIRATION IN SENESCENT SPRING WHEAT

    Energy Technology Data Exchange (ETDEWEB)

    GROSSMAN,S.; KIMBALL,B.A.; HUNSAKER,D.J.; LONG,S.P.; GARCIA,R.L.; KARTSCHALL,TH.; WALL,G.W.; PINTER,P.J,JR.; WECHSUNG,F.; LAMORTE,R.L.

    1998-12-31

    The seasonal course of canopy transpiration and the diurnal courses of latent heat flux of a spring wheat crop were simulated for atmospheric CO{sub 2} concentrations of 370 {micro}mol mol{sup {minus}1} and 550 {micro}mol mol{sup {minus}1}. The hourly weather data, soil parameters and the irrigation and fertilizer treatments of the Free-Air Carbon Dioxide Enrichment wheat experiment in Arizona (1992/93) were used to drive the model. The simulation results were tested against field measurements with special emphasis on the period between anthesis and maturity. A model integrating leaf photosynthesis and stomatal conductance was scaled to a canopy level in order to be used in the wheat growth model. The simulated intercellular CO{sub 2} concentration, C{sub i} was determined from the ratio of C{sub i} to the CO{sub 2} concentration at the leaf surface, C{sub s} the leaf to air specific humidity deficit and a possibly unfulfilled transpiration demand. After anthesis, the measured assimilation rates of the flag leaves decreased more rapidly than their stomatal conductances, leading to a rise in the C{sub i}/C{sub s} ratio. In order to describe this observation, an empirical model approach was developed which took into account the leaf nitrogen content for the calculation of the C{sub i}/C{sub s} ratio. Simulation results obtained with the new model version were in good agreement with the measurements. If changes in the C{sub i}/C{sub s} ratio accorded to the decrease in leaf nitrogen content during leaf senescence were not considered in the model, simulations revealed an underestimation of the daily canopy transpiration of up to 20% and a decrease in simulated seasonal canopy transpiration by 10%. The measured reduction in the seasonal sum of canopy transpiration and soil evaporation owing to CO{sub 2} enrichment, in comparison, was only about 5%.

  15. [Estimating forest canopy cover by combining spaceborne ICESat-GLAS waveforms and mul- tispectral Landsat-TM images].

    Science.gov (United States)

    2015-06-01

    The spatial distribution of forest canopy cover is a critical indicator for evaluating the forest productivity and decomposition rates. With the Wangqing Forest Region in Jilin Province of China as the study area, this study first estimated the forest canopy cover using spaceborne LiDAR IC- ESat-GLAS waveforms and Landsat-TM multispectral images, respectively, and then GLAS data and TM images were combined to further estimate forest canopy cover by using multiple linear regression and BP neural network. The results showed that when the forest canopy cover was estimated with single data source, the determination coefficient of model was 0.762 for GLAS data and 0.598 for TM data. When the forest canopy cover was estimated by combining GLAS data and TM data, the determination coefficient of model was 0.841 for multiple linear regression, and the simulation precision was 0.851 for BP neural network. The study indicated that the combination of ICESat-GLAS data and Landsat-TM images could exploit the advantages of multi-source remote sensing data and improve the estimating accuracy of forest canopy cover, and it was expected to provide a promising way for spatially continuous mapping of forest canopy cover in future.

  16. Implication of Intrastorm Rainfall-Canopy Interaction on Interception Performance of Broadleaf Evergreen Shrubs in an Ultra-Urban Setting

    Science.gov (United States)

    Yerk, W.; Montalto, F. A.

    2015-12-01

    Because of its ability to intercept a portion of rainfall, vegetated canopies can play substantial role in modulating the urban hydrological cycle. However, canopy interception research has historically been focused to forest canopies. The goal of our research is to quantify rainfall partitioning by isolated evergreen shrub canopies in an ultra-urban setting. The three year field experiment involved three exemplars of cherry laurel (Prunus laurocerasus 'Otto Luyken'.) Ten rain gauges positioned under each plant were used to measure throughfall with a sampling frequency of five seconds. A number of specific techniques were implemented to minimize error associated with the gauges, e.g., splash-in, splash-out and excessive wetting. The cumulative throughfall deficit (i.e., gross precipitation minus throughfall within the canopy projected area and minus stemflow) for the periods of August-December 2013, April-December 2014 and April-July 2015 was 39%. Spatial variability of throughfall was large (coefficient of variation up to 1.5.) Stable areas of preferential throughfall flux were observed. Stemflow showed a high variability (1.4 - 24%) between rain events. The relationship between throughfall and precipitation intensity was strongly linear (adjusted coefficient of determination R2 0.79) throughout the entire range of observed rainfall intensities. The overall ratio of throughfall to precipitation intensity was 0.48:1. The observations suggest that reduction of throughfall intensity by the canopy during a rainstorm determines the aggregate interception depth. In contrast, the amount of water stored on the canopy and evaporated between and after rain events contributes minimally to interception loss. Penman-Monteith estimates of wet canopy evaporation cannot account for the throughfall deficit. Lateral displacement of microdrops beyond the canopy projected area is another phenomenon that will be discussed and most recent observations of an extended gauge network will

  17. Assessing the Spectral Properties of Sunlit and Shaded Components in Rice Canopies with Near-Ground Imaging Spectroscopy Data

    Directory of Open Access Journals (Sweden)

    Kai Zhou

    2017-03-01

    Full Text Available Monitoring the components of crop canopies with remote sensing can help us understand the within-canopy variation in spectral properties and resolve the sources of uncertainties in the spectroscopic estimation of crop foliar chemistry. To date, the spectral properties of leaves and panicles in crop canopies and the shadow effects on their spectral variation remain poorly understood due to the insufficient spatial resolution of traditional spectroscopy data. To address this issue, we used a near-ground imaging spectroscopy system with high spatial and spectral resolutions to examine the spectral properties of rice leaves and panicles in sunlit and shaded portions of canopies and evaluate the effect of shadows on the relationships between spectral indices of leaves and foliar chlorophyll content. The results demonstrated that the shaded components exhibited lower reflectance amplitude but stronger absorption features than their sunlit counterparts. Specifically, the reflectance spectra of panicles had unique double-peak absorption features in the blue region. Among the examined vegetation indices (VIs, significant differences were found in the photochemical reflectance index (PRI between leaves and panicles and further differences in the transformed chlorophyll absorption reflectance index (TCARI between sunlit and shaded components. After an image-level separation of canopy components with these two indices, statistical analyses revealed much higher correlations between canopy chlorophyll content and both PRI and TCARI of shaded leaves than for those of sunlit leaves. In contrast, the red edge chlorophyll index (CIRed-edge exhibited the strongest correlations with canopy chlorophyll content among all vegetation indices examined regardless of shadows on leaves. These findings represent significant advances in the understanding of rice leaf and panicle spectral properties under natural light conditions and demonstrate the significance of commonly

  18. Measurement of snow interception and canopy effects on snow accumulation and melt in a mountainous maritime climate, Oregon, United States

    Science.gov (United States)

    Storck, Pascal; Lettenmaier, Dennis P.; Bolton, Susan M.

    2002-11-01

    The results of a 3 year field study to observe the processes controlling snow interception by forest canopies and under canopy snow accumulation and ablation in mountain maritime climates are reported. The field study was further intended to provide data to develop and test models of forest canopy effects on beneath-canopy snowpack accumulation and melt and the plot and stand scales. Weighing lysimeters, cut-tree experiments, and manual snow surveys were deployed at a site in the Umpqua National Forest, Oregon (elevation 1200 m). A unique design for a weighing lysimeter was employed that allowed continuous measurements of snowpack evolution beneath a forest canopy to be taken at a scale unaffected by variability in canopy throughfall. Continuous observations of snowpack evolution in large clearings were made coincidentally with the canopy measurements. Large differences in snow accumulation and ablation were observed at sites beneath the forest canopy and in large clearings. These differences were not well described by simple relationships between the sites. Over the study period, approximately 60% of snowfall was intercepted by the canopy (up to a maximum of about 40 mm water equivalent). Instantaneous sublimation rates exceeded 0.5 mm per hour for short periods. However, apparent average sublimation from the intercepted snow was less than 1 mm per day and totaled approximately 100 mm per winter season. Approximately 72 and 28% of the remaining intercepted snow was removed as meltwater drip and large snow masses, respectively. Observed differences in snow interception rate and maximum snow interception capacity between Douglas fir (Pseudotsuga menziesii), white fir (Abies concolor), ponderosa pine (Pinus ponderosa), and lodgepole pine (Pinus contorta) were minimal.

  19. [Microbial community and its activities in canopy- and understory humus of two montane forest types in Ailao Mountains, Northwest China].

    Science.gov (United States)

    Liu, Yong-jie; Liu, Wen-yao; Chen, Lin; Zhang, Han-bo; Wang, Gao-sheng

    2010-09-01

    Mid-montane moist evergreen broadleaved forest (MMF) and top-montane dwarf mossy forest (DMF) are the two major natural forest types in subtropical mountainous area of Ailao Mountains, Northwest China. In this paper, a comparative study was made on the microbial composition, quantity, biochemical activity, metabolic activity, and their seasonal dynamics in the canopy- and understory humus of the two forest types. The composition, quantity, and metabolic activity of the microbes in the canopy humus of dominant tree species in MMF and DMF were also analyzed. In the canopy humus of the two forest types, the amounts of fungi and actinomycetes, microbial biomass C and N, and intensities of nitrogen fixation and cellulose decomposition were significantly higher than those in understory humus. Meanwhile, the amount of cellulose-decomposing microbes (ACDM), cellulose decomposition intensity, microbial biomass C and N, and metabolic activity in the canopy humus of MMF were significantly higher than those of DMF. The amounts of bacteria, fungi, and aerobic nitrogen-fixing bacteria (ANFB) and the metabolic activity in the canopy humus of MMF and DMF were significantly higher in wet season than in dry season, while a contradictory trend was observed on the amount of actinomycetes. No significant difference was observed on the amount of ACDM between wet season and dry season. For the two forest types, the amounts of microbes and their biochemical activities in canopy humus had a larger seasonal variation range than those in understory humus. There was a significant difference in the amounts of the microbes in canopy humus among the dominant tree species in MMF and DMF, especially in wet season. The microbes in canopy humus played important roles in maintaining the biodiversity of epiphytes in the canopy, and in supplying the needed nutrients for the vigorous growth of the epiphytes.

  20. Ground-Based Lidar Measurements of Forest Canopy Structure as Predictors of Net Primary Production Across Successional Time

    Science.gov (United States)

    Scheuermann, C. M.; Gough, C. M.; Nave, L. E.

    2015-12-01

    Forest canopy structure is a key predictor of gas exchange processes that control carbon (C) uptake, including the allocation of photosynthetically fixed C to new plant biomass growth, or net primary production (NPP). Prior work suggests forest canopy structural complexity (CSC), the arrangement of leaves within a volume of canopy, changes as forests develop and is a strong predictor of NPP. However, the expressions of CSC that best predict NPP over decadal to century timescales is unknown. Our objectives were to use multiple remote sensing observations to characterize forest canopy structure in increasing dimensional complexity over a forest age gradient, and to identify which expressions of physical structure best served as proxies of NPP. The study at the University of Michigan Biological Station in Pellston, MI, USA uses two parallel forest chronosequences with different harvesting and fire disturbance histories and includes three old-growth ecosystems varying in canopy composition. We have derived several expressions of 2-D and 3-D forest canopy structure from hemispherical images, a ground-based portable canopy lidar (PCL), and a 3-D terrestrial lidar scanner (TLS), and are relating these structural metrics with NPP and light and nitrogen allocation within the canopy. Preliminary analysis shows that old-growth stands converged on a common mean CSC, but with substantially higher within-stand variation in complexity as deciduous tree species increased in forest canopy dominance. Forest stands that were more intensely disturbed were slower to recover leaf area index (LAI) as they regrew, but 2-D measures of CSC increased similarly as forests aged, regardless of disturbance history. Ongoing work will relate long-term trends in forest CSC with NPP and resource allocation to determine which forest structure remote sensing products are most useful for modeling and scaling C cycling processes through different stages of forest development.

  1. TLS monitoring of snowpack distribution in a mountain forested areas: Analysis of canopy disturbance on snow evolution.

    Science.gov (United States)

    Revuelto, Jesús; López-Moreno, Juan Ignacio; Azorin-Molina, Cesar; Alonso, Esteban; San Miguel, Alba

    2016-04-01

    Forested mountain areas at high elevations show important interaction with snowpack distribution and its evolution in time, and thus in many cases are the limit of the cryosphere in mountain zones. Such interactions have significant consequences in the hydrologic response of mountain rivers. Thereby observing the evolution of snowpack in forested areas has a big importance form a basic science perspective and also for water management. This work presents a detailed comparison of small scale effect of forest characteristics on snowpack distribution in Central Pyrenees, before and after a strong modification of canopies features. The snowpack distribution has been obtained using a novel remote sensing technology (Terrestrial Laser Scanner, TLS), with high spatial resolution (0.25m) over a 1000m2 study area for 27 survey dates along three snow seasons. Between the second and the third snow season a strong canopy pruning was performed in the study site, and thereby the snowpack evolution with both canopy configurations was compared. A Principal Component Analysis has been applied to analyze the snowpack distributions observed during the study period. Results obtained have shown that despite large differences in Canopy radius (1.2 m) and Canopy height (2.5m), not a different snowpack evolution was observed. For both Canopy configurations the variable with higher importance on snowpack distribution is the snow depth amount. The change in forest structure has important implications in the decrease of Canopy areas and the increase of Open areas (proportionally to Canopy change), but not a different interaction with forest structure was observed. The canopy pruning realized in the study site is typically accomplished for fire risk reduction and this shows the consequences that such action has in snowpack distribution and that hereby these may have in water management possibly delaying peak runoff.

  2. Usability of multiangular imaging spectroscopy data for analysis of vegetation canopy shadow fraction in boreal forest

    Science.gov (United States)

    Markiet, Vincent; Perheentupa, Viljami; Mõttus, Matti; Hernández-Clemente, Rocío

    2016-04-01

    Imaging spectroscopy is a remote sensing technology which records continuous spectral data at a very high (better than 10 nm) resolution. Such spectral images can be used to monitor, for example, the photosynthetic activity of vegetation. Photosynthetic activity is dependent on varying light conditions and varies within the canopy. To measure this variation we need very high spatial resolution data with resolution better than the dominating canopy element size (e.g., tree crown in a forest canopy). This is useful, e.g., for detecting photosynthetic downregulation and thus plant stress. Canopy illumination conditions are often quantified using the shadow fraction: the fraction of visible foliage which is not sunlit. Shadow fraction is known to depend on view angle (e.g., hot spot images have very low shadow fraction). Hence, multiple observation angles potentially increase the range of shadow fraction in the imagery in high spatial resolution imaging spectroscopy data. To investigate the potential of multi-angle imaging spectroscopy in investigating canopy processes which vary with shadow fraction, we obtained a unique multiangular airborne imaging spectroscopy data for the Hyytiälä forest research station located in Finland (61° 50'N, 24° 17'E) in July 2015. The main tree species are Norway spruce (Picea abies L. karst), Scots pine (Pinus sylvestris L.) and birch (Betula pubescens Ehrh., Betula pendula Roth). We used an airborne hyperspectral sensor AISA Eagle II (Specim - Spectral Imaging Ltd., Finland) mounted on a tilting platform. The tilting platform allowed us to measure at nadir and approximately 35 degrees off-nadir. The hyperspectral sensor has a 37.5 degrees field of view (FOV), 0.6m pixel size, 128 spectral bands with an average spectral bandwidth of 4.6nm and is sensitive in the 400-1000 nm spectral region. The airborne data was radiometrically, atmospherically and geometrically processed using the Parge and Atcor software (Re Se applications Schl

  3. A parameterization of momentum roughness length and displacement height for a wide range of canopy densities

    Directory of Open Access Journals (Sweden)

    A. Verhoef

    1997-01-01

    Full Text Available Values of the momentum roughness length, z0, and displacement height, d, derived from wind profiles and momentum flux measurements, are selected from the literature for a variety of sparse canopies. These include savannah, tiger-bush and several row crops. A quality assessment of these data, conducted using criteria such as available fetch, height of wind speed measurement and homogeneity of the experimental site, reduced the initial total of fourteen sites to eight. These datapoints, combined with values carried forward from earlier studies on the parameterization of z0 and d, led to a maximum number of 16 and 24 datapoints available for d and z0, respectively. The data are compared with estimates of roughness length and displacement height as predicted from a detailed drag partition model, R92 (Raupach, 1992, and a simplified version of this model, R94 (Raupach, 1994. A key parameter in these models is the roughness density or frontal area index, λ. Both the comprehensive and the simplified model give accurate predictions of measured z0 and d values, but the optimal model coefficients are significantly different from the ones originally proposed in R92 and R94. The original model coefficients are based predominantly on measured aerodynamic parameters of relatively closed canopies and they were fitted `by eye'. In this paper, best-fit coefficients are found from a least squares minimization using the z0 and d values of selected good-quality data for sparse canopies and for the added, mainly closed canopies. According to a statistical analysis, based on the coefficient of determination (r2, the number of observations and the number of fitted model coefficients, the simplified model, R94, is deemed to be the most appropriate for future z0 and d predictions. A CR value of 0.35 and a cd1 value of about 20 are found to be appropriate for a large range of canopies varying in density from closed to very sparse. In this case, 99% of the total variance

  4. Decoupling Contributions from Canopy Structure and Leaf Optics is Critical for Remote Sensing Leaf Biochemistry (Reply to Townsend, et al.)

    Science.gov (United States)

    Knyazikhin, Yuri; Lewis, Philip; Disney, Mathias I.; Stenberg, Pauline; Mottus, Matti; Rautianinen, Miina; Kaufmann, Robert K.; Marshak, Alexander; Schull, Mitchell A.; Carmona, Pedro Latorre; Vanderbilt, Vern; Davis, Anthony B.; Baret, Frederic; Jacquemoud, Stephane; Lyapustin, Alexei; Yang, Yan; Myneni, Ranga B.

    2013-01-01

    Townsend et al. (1) agree that we explained that the apparent relationship (2) between foliar nitrogen (%N) and near-infrared (NIR) canopy reflectance was largely attributable to structure (which is in turn caused by variation in fraction of broadleaf canopy). Our conclusion that the observed correlation with %N was spurious (i.e., lacking a causal basis) is, thus, clearly justified: we demonstrated that structure explained the great majority of observed correlation, where the structural influence was derived precisely via reconciling the observed correlation with radiative-transfer theory. What this also suggests is that such correlations, although observed, do not uniquely provide information on canopy biochemical constituents.

  5. Canopy position affects the relationships between leaf respiration and associated traits in a tropical rainforest in Far North Queensland.

    Science.gov (United States)

    Weerasinghe, Lasantha K; Creek, Danielle; Crous, Kristine Y; Xiang, Shuang; Liddell, Michael J; Turnbull, Matthew H; Atkin, Owen K

    2014-06-01

    We explored the impact of canopy position on leaf respiration (R) and associated traits in tree and shrub species growing in a lowland tropical rainforest in Far North Queensland, Australia. The range of traits quantified included: leaf R in darkness (RD) and in the light (RL; estimated using the Kok method); the temperature (T)-sensitivity of RD; light-saturated photosynthesis (Asat); leaf dry mass per unit area (LMA); and concentrations of leaf nitrogen (N), phosphorus (P), soluble sugars and starch. We found that LMA, and area-based N, P, sugars and starch concentrations were all higher in sun-exposed/upper canopy leaves, compared with their shaded/lower canopy and deep-shade/understory counterparts; similarly, area-based rates of RD, RL and Asat (at 28 °C) were all higher in the upper canopy leaves, indicating higher metabolic capacity in the upper canopy. The extent to which light inhibited R did not differ significantly between upper and lower canopy leaves, with the overall average inhibition being 32% across both canopy levels. Log-log RD-Asat relationships differed between upper and lower canopy leaves, with upper canopy leaves exhibiting higher rates of RD for a given Asat (both on an area and mass basis), as well as higher mass-based rates of RD for a given [N] and [P]. Over the 25-45 °C range, the T-sensitivity of RD was similar in upper and lower canopy leaves, with both canopy positions exhibiting Q10 values near 2.0 (i.e., doubling for every 10 °C rise in T) and Tmax values near 60 °C (i.e., T where RD reached maximal values). Thus, while rates of RD at 28 °C decreased with increasing depth in the canopy, the T-dependence of RD remained constant; these findings have important implications for vegetation-climate models that seek to predict carbon fluxes between tropical lowland rainforests and the atmosphere.

  6. Radiative Transfer Modeling of the Coupled Atmosphere and Plant Canopy and BRDF Retrieval

    Science.gov (United States)

    Liang, Shunlin

    The limitations of conventional satellite remote sensing that mainly uses nadir observations of terrestrial surfaces has led to an exploration of the use of angular signatures. The Earth Observation System (EOS), to be launched in 1998, is capable of providing directional observations from the space. This dissertation was designed to study the fundamental properties of the directional reflectance of terrestrial surfaces. Four new and inter-related algorithms have been developed in this study, including (a) an improved Gauss -Seidel numerical algorithm to solve the coupled atmosphere --vegetation canopy radiative transfer equation; (b) an analytic bidirectional reflectance distribution function (BRDF) model of canopy radiative transfer and its inversion algorithm; (c) a statistical BRDF model; and (d) an analytic model of atmospheric radiance transfer over a non-Lambertian surface. The classic Gauss-Seidel algorithm has been widely applied in atmosphere research. This is its first application for calculating the multiple-scattering radiance of the coupled atmosphere and canopy, and an improved iteration formula is derived to speed convergence due to large optical thickness. One of the major advantages of this algorithm is that it can easily incorporate any form of surface BRDF as the lower boundary condition. This dissertation presents an analytic canopy BRDF model based on a rigorous canopy radiative transfer equation in which the multiple-scattering component is approximated by asymptotic theory and the single-scattering calculation, which requires numerical integration to properly accommodate the hotspot effect, is also simplified. The Powell algorithm is then used to retrieve biophysical parameters from soybean measurement data based on both canopy and sky radiance distribution models. The results show that leaf area index (LAI) can be well retrieved, and more efforts are required to retrieve leaf angle distribution (LAD). A new procedure is developed to obtain

  7. Large Eddy Simulations of Volume Restriction Effects on Canopy-Induced Increased-Uplift Regions

    Science.gov (United States)

    Chatziefstratiou, E.; Bohrer, G.; Velissariou, V.

    2012-12-01

    ABSTRACT Previous modeling and empirical work have shown the development of important areas of increased uplift past forward-facing steps, and recirculation zones past backward-facing steps. Forests edges represent a special kind of step - a semi-porous one. Current models of the effects of forest edges on the flow represent the forest with a prescribed drag term and does not account for the effects of the solid volume in the forest that restrict the airflow. The RAMS-based Forest Large Eddy Simulation (RAFLES) resolves flows inside and above forested canopies. RAFLES is spatially explicit, and uses the finite volume method to solve a descretized set of Navier-Stokes equations. It accounts for vegetation drag effects on the flow and on the flux exchange between the canopy and the canopy air, proportional to the local leaf density. For a better representation of the vegetation structure in the numerical grid within the canopy sub-domain, the model uses a modified version of the cut cell coordinate system. The hard volume of vegetation elements, in forests, or buildings, in urban environments, within each numerical grid cell is represented via a sub-grid-scale process that shrinks the open apertures between grid cells and reduces the open cell volume. We used RAFLES to simulate the effects of a canopy of varying foliage and stem densities on flow over virtual qube-shaped barriers under neutrally buoyant conditions. We explicitly tested the effects of the numerical representation of volume restriction, independent of the effects of the leaf drag by comparing drag-only simulations, where we prescribed no volume or aperture restriction to the flow, restriction-only simulations, where we prescribed no drag, and control simulations, where both drag and volume plus aperture restriction were included. Our simulations show that representation of the effects of the volume and aperture restriction due to obstacles to flow is important (figure 1) and leads to differences in the

  8. [Winter wheat GPC estimation based on leaf and canopy chlorophyll parameters].

    Science.gov (United States)

    Song, Xiao-Yu; Wang, Ji-Hua; Yang, Gui-Jun; Cui, Bei; Chang, Hong

    2014-07-01

    The present study focused on the wheat harvest grain protein content (GPC) estimation based on wheat leaf and canopy chlorophyll parameters, SPAD and SFR, which were acquired by two hand-held instruments, SPAD and Multiplex 3. The wheat GPC estimate experiment was applied on a wheat field of the Scientific Observation and Experiment Field Station for Precision Agriculture at suburb of Beijing in 2012. The wheat leaf SPAD and canopy SFR value were measured in field for all 110 wheat sample points at five different wheat growth stages from April to June. The wheat plant sample for each point was then collected after the SPAD and SFR measurement and sent to lab for leaf nitrogen content (LNC) and canopy nitrogen density (CND) analysis. Analysis results showed that the correlation coefficients of wheat GPC with wheat CND were much higher than that from wheat tillering stage to early milking stage. They were similar at the wheat middle milking stage. While the wheat leaf SPAD value was highly correlated with wheat LNC at wheat tillering, heading and early milking stage. Wheat canopy chlorophyll parameters SFR were highly correlated with wheat CND at wheat tillering, jointing, heading and milking stage. It can be seen from the study that SFR is more sensitive to the wheat CND compared with wheat LNC. The analysis also indicated that leaf SPAD value at wheat tillering, heading and milking stage was highly correlated with wheat GPC and yield of grain protein (YGP). The wheat canopy parameters, SFR_G and SFR_R were significantly correlated with wheat GPC and YGP at wheat milking stage. Then the optimal GPC and YGP estimation model was established. The R2 of GPC estimation models established by SPAD and SFR_R are 0.426 and 0.497, and the standard errors of the estimate are 0.060% and 0.055%, respectively. The R2 of YGP estimation models established by SPAD and SFR_R are 0.366 and 0.386 and the standard errors of the estimate are 125.367 and 123.454 kg x ha(-1), respectively

  9. Atmospheric Nitrogen Deposition at a Conifer Forest: Canopy Nitrogen Uptake and Photosynthesis

    Science.gov (United States)

    Tomaszewski, T.; Sievering, H.

    2006-12-01

    Atmospheric nitrogen (N) deposition is known to impact forests in a variety of ways ranging from increased growth and photosynthesis to needle necrosis. More than half of the growing-season N deposition flux at the Niwot Ridge Long-Term Ecological Research site's subalpine forest (Niwot Forest) is of anthropogenic origin. N fertilization studies investigating forest responses to increased N deposition have primarily dealt with deposition loading to the soil. However, some studies indicate that forest canopies (especially conifer forest canopies) retain a substantial portion of atmospherically-deposited N before this N reaches the soil in throughfall solutions. In the present study, canopy N uptake (CNU) and the influence of CNU on photosynthesis are investigated. At the Niwot Forest, growing-season throughfall fluxes of ammonium (NH4+) and nitrate (NO3-) are markedly lower (~70% lower) than fluxes in wet plus dry deposition flux, indicating the forest canopy is taking up atmospherically-deposited N. This uptake was found to be driven by diffusion of NH4+ and NO3- into canopy tissues. Although the canopy is taking up atmospherically-deposited N, spruce foliar N content is still relatively low at the Niwot Forest. This low foliar N content contributes to low rates of light-saturated photosynthesis and maximum carboxylation (initial rate of CO2 reduction by RUBISCO). Further, a strong linear dependence of maximum carboxylation on needle N content was found and N solutions that had been directly applied to foliage at Niwot Forest spruce branches induced a 12% greater photosynthetic efficiency (i.e., proportion of absorbed light utilized by photosynthesis). The low foliar N content and dependence of photosynthetic parameters on foliar N content show that the Niwot Forest has yet to reach a state of N saturation. Noting the Niwot Forest has one of the largest N deposition fluxes in the Rockies, our CNU and photosynthetic parameter results characterizing pre

  10. Simulating ozone dry deposition at a boreal forest with a multi-layer canopy deposition model

    Science.gov (United States)

    Zhou, Putian; Ganzeveld, Laurens; Rannik, Üllar; Zhou, Luxi; Gierens, Rosa; Taipale, Ditte; Mammarella, Ivan; Boy, Michael

    2017-01-01

    A multi-layer ozone (O3) dry deposition model has been implemented into SOSAA (a model to Simulate the concentrations of Organic vapours, Sulphuric Acid and Aerosols) to improve the representation of O3 concentration and flux within and above the forest canopy in the planetary boundary layer. We aim to predict the O3 uptake by a boreal forest canopy under varying environmental conditions and analyse the influence of different factors on total O3 uptake by the canopy as well as the vertical distribution of deposition sinks inside the canopy. The newly implemented dry deposition model was validated by an extensive comparison of simulated and observed O3 turbulent fluxes and concentration profiles within and above the boreal forest canopy at SMEAR II (Station to Measure Ecosystem-Atmosphere Relations II) in Hyytiälä, Finland, in August 2010. In this model, the fraction of wet surface on vegetation leaves was parametrised according to the ambient relative humidity (RH). Model results showed that when RH was larger than 70 % the O3 uptake onto wet skin contributed ˜ 51 % to the total deposition during nighttime and ˜ 19 % during daytime. The overall contribution of soil uptake was estimated about 36 %. The contribution of sub-canopy deposition below 4.2 m was modelled to be ˜ 38 % of the total O3 deposition during daytime, which was similar to the contribution reported in previous studies. The chemical contribution to O3 removal was evaluated directly in the model simulations. According to the simulated averaged diurnal cycle the net chemical production of O3 compensated up to ˜ 4 % of dry deposition loss from about 06:00 to 15:00 LT. During nighttime, the net chemical loss of O3 further enhanced removal by dry deposition by a maximum ˜ 9 %. Thus the results indicated an overall relatively small contribution of airborne chemical processes to O3 removal at this site.

  11. Simultaneous measurements of HONO below and above a spruce forest canopy

    Science.gov (United States)

    Sörgel, M.; Trebs, I.; Moravek, A.; Hens, K.; Zetzsch, C.

    2009-04-01

    Nitrous Acid (HONO) plays an important role in atmospheric chemistry because it is easily photolyzed and contributes to OH, the most important oxidizing agent in the atmosphere. Understanding sources and sinks of HONO (especially during daytime) leads to a better estimation of OH-budget. We have performed simultaneous HONO measurements in and above a tall spruce forest canopy using two long path absorption photometers (LOPAPs) at a field site located in the Fichtelgebirge mountains in northeastern Bavaria, Germany (50°09'N, 11°52'E, 775m above sea level). The LOPAP is a wet chemical instrument actively correcting for interferences (Kleffmann et al., 2002). Measurements were made simultaneously with the devices from 13-25 Sep 2007 on a tower (z = 24.25m, above canopy) and in the trunk space (z = 0.48m close to the forest floor). To determine the instrument precisions, both instruments were operated side-by-side in the trunk space at z = 1m, enabling the validation of observed mixing ratio differences in and above the canopy. At HONO levels ranging from 30 ppt to 220 ppt, the two LOPAP instruments agreed within 10% under dry conditions. Both instruments were operating without temperature control under field conditions including rainy, foggy and dry clear sky periods with large temperature variations (5 - 20 °C). Several other micrometeorological and chemical quantities were measured aiming to investigate the coupling between soil, canopy and atmospheric boundary layer. The measured HONO mixing ratios showed typical diel cycles with higher values during nighttime, especially during dry periods. During wet conditions, mixing ratios were significantly lower. Average mixing ratios measured with the LOPAP instruments ranged from 40 ppt to 80 ppt during the day and from 80 ppt to 150 ppt during the night with a higher variability during nighttime, but were found to be independent of NO2 mixing ratios. The average HONO/NO2 ratios are 0.03 both in and above canopy, which

  12. Canopy-scale relationships between stomatal conductance and photosynthesis in irrigated rice.

    Science.gov (United States)

    Ono, Keisuke; Maruyama, Atsushi; Kuwagata, Tsuneo; Mano, Masayoshi; Takimoto, Takahiro; Hayashi, Kentaro; Hasegawa, Toshihiro; Miyata, Akira

    2013-07-01

    Modeling stomatal behavior is critical in research on land-atmosphere interactions and climate change. The most common model uses an existing relationship between photosynthesis and stomatal conductance. However, its parameters have been determined using infrequent and leaf-scale gas-exchange measurements and may not be representative of the whole canopy in time and space. In this study, we used a top-down approach based on a double-source canopy model and eddy flux measurements throughout the growing season. Using this approach, we quantified the canopy-scale relationship between gross photosynthesis and stomatal conductance for 3 years and their relationships with leaf nitrogen content throughout each growing season above a paddy rice canopy in Japan. The canopy-averaged stomatal conductance (gsc ) increased with increasing gross photosynthesis per unit green leaf area (Ag ), as was the case with leaf-scale measurements, and 41-90% of its variation was explained by variations in Ag adjusted to account for the leaf-to-air vapor-pressure deficit and CO2 concentration using the Leuning model. The slope (m) in this model (gsc versus the adjusted Ag ) was almost constant within a 15-day period, but changed seasonally. The m values determined using an ensemble dataset for two mid-growing-season 15-day periods were 30.8 (SE = 0.5), 29.9 (SE = 0.7), and 29.9 (SE = 0.6) in 2004, 2005, and 2006, respectively; the overall mid-season value was 30.3 and did not greatly differ among the 3 years. However, m appeared to be higher during the early and late growing seasons. The ontogenic changes in leaf nitrogen content strongly affected Ag and thus gsc . In addition, we have discussed the agronomic impacts of the interactions between leaf nitrogen content and gsc . Despite limitations in the observations and modeling, our canopy-scale results emphasize the importance of continuous, season-long estimates of stomatal model parameters for crops using top-down approaches.

  13. Aerosol dry deposition on vegetative canopies. Part II: A new modelling approach and applications

    Science.gov (United States)

    Petroff, Alexandre; Mailliat, Alain; Amielh, Muriel; Anselmet, Fabien

    2008-05-01

    This paper presents a new approach for the modelling of aerosol dry deposition on vegetation. It follows a companion article, in which a review of the current knowledge highlights the need for a better description of the aerosol behaviour within the canopy [Petroff, A., Mailliat, A., Amielh, M., Anselmet, F., 2008. Aerosol dry deposition on vegetative canopies. Part I: Review of present knowledge. Atmospheric Environment, in press, doi:10.1016/j.atmosenv.2007.09.043]. Concepts from multi-phase flow studies are used for describing the canopy medium and deriving a time and space-averaged aerosol balance equation and the associated deposition terms. The closure of the deposition terms follows an up-scaling procedure based on the statistical distribution of the collecting elements. This aerosol transport model is then applied in a stationary and mono-dimensional configuration and takes into account the properties of the vegetation, the aerosol and the turbulent flow. Deposition mechanisms are Brownian diffusion, interception, inertial and turbulent impactions, and gravitational settling. For each of them, a parameterisation of the particle collection is derived and the quality of their predictions is assessed by comparison with wind-tunnel deposition measurements on coniferous twigs [Belot, Y., Gauthier, D., 1975. Transport of micronic particles from atmosphere to foliar surfaces. In: De Vries, D.A., Afgan, N.H. (Eds.), Heat and Mass Transfer in the Biosphere. Scripta Book, Washington, DC, pp. 583-591; Belot, Y., 1977. Etude de la captation des polluants atmosphériques par les végétaux. CEA, R-4786, Fontenay-aux-Roses; Belot, Y., Camus, H., Gauthier, D., Caput, C., 1994. Uptake of small particles by canopies. The Science of the Total Environment 157, 1-6]. Under a real canopy configuration, the predictions of the aerosol transport model compare reasonably well with detailed on-site deposition measurements of Aitken mode particles [Buzorius, G., Rannik, Ü., M

  14. [A novel vegetation index (MPRI) of corn canopy by vehicle-borne dynamic prediction].

    Science.gov (United States)

    Li, Shu-qiang; Li, Min-zan; Sun, Hong

    2014-06-01

    Ground-based remote sensing system is a significant way to understand the growth of corn and provide accurate and scientific data for precision agriculture. The vehicle-borne system is one of the most important tools for corn canopy monitoring. However, the vehicle-borne growth monitoring system cannot maintain steady operations due to the row spacing of corn. The reflectance of corn canopy, which was used to construct the model for the chlorophyll content, was disturbed by the reflectance of soil background. The background interference with the reflectance could not be removed effectively, which would result in a deviation in the growth monitoring. In order to overcome this problem, a novel vegetation index named MPRI was developed in the present paper. The tests were carried out by the vehicle-borne system on the cornfield. The sensors which configured the vehicle-borne system had 4 bands, being respectively 550, 650, 766 and 850 nm. It would obtain the spectral data while the vehicle moved along the row direction. The sampling rate was about 1 point per second. The GPS receiver obtained the location information at the same rate. MPRI was made up by the reflectance ratio of 660 and 550 nm. It was very effective to analyze the information about the reflectance of the canopy. The results of experiments showed that the MPRI of soil was the positive value and the MPRI of canopy was the negative value. So it is easier to distinguish the spectral information about soil and corn canopy by MPRI. The results indicated that: it had satisfactory forecasting accuracy for the chlorophyll content by using the MPRI on the moving monitoring. The R2 of the prediction model was about 0.72. The R2 Of the model of NDVI, which was used to represent the chlorophyll content, was only 0.24. It indicates that MPRI had good measurement results for the dynamic measurement process. It provided the novel measurement way to get the canopy reflectance spectra and the better vegetation index to

  15. Potential performance characteristics of ICESat-2/ATLAS for canopy height retrievals in different ecosystems

    Science.gov (United States)

    Neuenschwander, A. L.; Pitts, K.

    2015-12-01

    With an expected launch in late 2017 (or early 2018), the ICESat-2 satellite will provide a global distribution of geodetic measurements of both the terrain surface and relative canopy heights which will provide a significant benefit to society through a variety of applications including forest structural mapping and improved global digital terrain models. The Advanced Topographic Laser Altimeter System (ATLAS) instrument on ICESat-2 will utilize a photon counting lidar which utilizes low power laser pulse with detectors sensitive at the single photon level. Due to this type of detector, any returned photon whether from the reflected signal or solar background can trigger a detection event. The ATLAS instrument will record the arrival time associated with a single photon detection that can occur anywhere within the vertical distribution of the reflected signal, that is, anywhere within the vertical distribution of the canopy. One of the uncertainties facing the ecosystem community is a comprehensive understanding of the performance of ICESat-2 will be for various ecosystems. Specifically, which ecosystems -and to a greater extent- what amount of canopy cover will create constraints on the ability to derive relative canopy height from ICESat-2 measurements. This paper aims to provide the science and user community of the ICESat-2 land/vegetation data products with a realistic understanding of the performance characteristics and subsequent data quality and the associated errors. To simulate ICESat-2/ATLAS data, data from small-footprint waveform lidar are the best surrogate for empirically deriving simulated ICESat-2 data as the entire temporal profile of the laser energy is recorded on each waveform. As such, a normalized waveform is the probability of where a photon is returned from the reflecting surface along the laser line-of-sight. Using this empirical approach, simulated ICESat-2 data can be developed for a variety of ecosystems ranging from sparse shrublands

  16. Assessing the impacts of canopy openness and flight parameters on detecting a sub-canopy tropical invasive plant using a small unmanned aerial system

    Science.gov (United States)

    Perroy, Ryan L.; Sullivan, Timo; Stephenson, Nathan

    2017-03-01

    Small unmanned aerial systems (sUAS) have great potential to facilitate the early detection and management of invasive plants. Here we show how very high-resolution optical imagery, collected from small consumer-grade multirotor UAS platform at altitudes of 30-120 m above ground level (agl), can be used to detect individual miconia (Miconia calvescens) plants in a highly invaded tropical rainforest environment on the island of Hawai'i. The central aim of this research was to determine how overstory vegetation cover, imagery resolution, and camera look-angle impact the aerial detection of known individual miconia plants. For our finest resolution imagery (1.37 cm ground sampling distance collected at 30 m agl), we obtained a 100% detection rate for sub-canopy plants with above-crown openness values >40% and a 69% detection rate for those with >20% openness. We were unable to detect any plants with plants below overstory vegetation, though this effect decreased with increasing flight altitude. While dense overstory canopy cover, limited flight times, and visual line of sight regulations present formidable obstacles for detecting miconia and other invasive plant species, we show that sUAS platforms carrying optical sensors can be an effective component of an integrated management plan within challenging subcanopy forest environments.

  17. An integrated model of soil-canopy spectral radiance observations, photosynthesis, fluorescence, temperature and energy balance

    Directory of Open Access Journals (Sweden)

    C. van der Tol

    2009-06-01

    Full Text Available This paper presents the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes, which is a vertical (1-D integrated radiative transfer and energy balance model. It calculates the radiation and the energy balance of a vegetated land surface at the level of single leaves as well as at canopy level, and the spectrum of the outgoing radiation in the viewing direction, at a high spectral resolution over the range from 0.4 to 50 μm, thus including the visible, near and shortwave infrared, as well as the thermal domain. A special routine is dedicated to the calculation of chlorophyll fluorescence. The calculation of radiative transfer and the energy balance is fully integrated, allowing for feedback between surface temperatures, leaf chlorophyll fluorescence and radiative fluxes. Model simulations were evaluated against observations reported in the literature. The model may serve as a theoretical ground truth to derive relationships between observed spectra and physical processes at the land surface.

  18. Assessing the vegetation canopy influences on wind flow using wind tunnel experiments with artificial plants

    Indian Academy of Sciences (India)

    Youngjoo Hong; Dongyeob Kim; Sangjun Im

    2016-04-01

    Wind erosion causes serious problems and considerable threat in most regions of the world. Vegetation on the ground has an important role in controlling wind erosion by covering soil surface and absorbingwind momentum. A set of wind tunnel experiments was performed to quantitatively examine the effect of canopy structure on wind movement. Artificial plastic vegetations with different porosity and canopyshape were introduced as the model canopy. Normalized roughness length $(Z0/H)$ and shear velocity ratio $(R)$ were analyzed as a function of roughness density ($\\lambda$). Experiments showed that $Z0/H$ increasesand R decreases as λ reaches a maximum value, $\\lambda_{max}$, while the values of $Z0/H$ and $R$ showed little change with $\\lambda$ value beyond as $\\lambda_{max}$.

  19. Estimation of chlorophyll contents in leaves and canopy of steppe vegetation using hyperspectral measurements

    Science.gov (United States)

    Wei, Dandan; Xiao, Chenchao; Zhang, Zhenhua; Wei, Hongyan; Shang, Kun

    2016-04-01

    As an important part of the Eurasian Steppe, the temperate typical steppe in Inner Mongolia is highly representative of the Eurasian vegetation. Compared to multispectral remote sensing, hyperspectral remote sensing is more sensitive in monitoring some characteristics of vegetation. However, the research on the typical temperate steppe in Inner Mongolia is still not perfect, so we selected three sampling zones with different dominant species on the typical steppe in Xilinhot of Inner Mongolia. We collected spectrum of leaves and canopy separately to estimate content of chlorophyll of steppe vegetation. In addition, we compared and analyzed the advantage and feasibility of different estimation methods in estimating chlorophyll contents of meadows which have different dominant species through cross validation. The conclusions drawn in this research are as follows: Due to significant discontinuity, maximum first derivative method and Lagrange interpolation method are not suitable for estimation of chlorophyll of typical steppe. Compared with other methods, the red edge position calculated with four points linear interpolation obviously migrates to long wave direction. Inverted Gaussian model and four points linear interpolation both show low sensitivity for Stipa grandis steppe zone (with Stipa grandis as dominant species) where chlorophyll concentration is low and there is saturation phenomenon and weak stability (obvious variation of R2) for Leymus chinensis steppe (with Leymus chinensis as dominant species) where chlorophyll concentration is high, so they are also not the best choice. Linear extrapolation and polynomial fitting show certain saturation for high concentration of chlorophyll and also high correlation coefficient for both leaves and canopy, so they are suitable for estimation of chlorophyll concentration of leaves and canopy on the steppe. The different methods of extracting red edge are better at estimating chlorophyll of leaves than canopy and the

  20. Marsh canopy leaf area and orientation calculated for improved marsh structure mapping

    Science.gov (United States)

    Ramsey III, Elijah W.; Rangoonwala, Amina; Jones, Cathleen E.; Bannister, Terri

    2015-01-01

    An approach is presented for producing the spatiotemporal estimation of leaf area index (LAI) of a highly heterogeneous coastal marsh without reliance on user estimates of marsh leaf-stem orientation. The canopy LAI profile derivation used three years of field measured photosynthetically active radiation (PAR) vertical profiles at seven S. alterniflora marsh sites and iterative transform of those PAR attenuation profiles to best-fit light extinction coefficients (KM). KM sun zenith dependency was removed obtaining the leaf angle distribution (LAD) representing the average marsh orientation and the LAD used to calculate the LAI canopy profile. LAI and LAD reproduced measured PAR profiles with 99% accuracy and corresponded to field documented structures. LAI and LAD better reflect marsh structure and results substantiate the need to account for marsh orientation. The structure indexes are directly amenable to remote sensing spatiotemporal mapping and offer a more meaningful representation of wetland systems promoting biophysical function understanding.

  1. Growth of soybean at future tropospheric ozone concentrations decreases canopy evapotranspiration and soil water depletion.

    Science.gov (United States)

    Bernacchi, Carl J; Leakey, Andrew D B; Kimball, Bruce A; Ort, Donald R

    2011-06-01

    Tropospheric ozone is increasing in many agricultural regions resulting in decreased stomatal conductance and overall biomass of sensitive crop species. These physiological effects of ozone forecast changes in evapotranspiration and thus in the terrestrial hydrological cycle, particularly in intercontinental interiors. Soybean plots were fumigated with ozone to achieve concentrations above ambient levels over five growing seasons in open-air field conditions. Mean season increases in ozone concentrations ([O₃]) varied between growing seasons from 22 to 37% above background concentrations. The objective of this experiment was to examine the effects of future [O₃] on crop ecosystem energy fluxes and water use. Elevated [O₃] caused decreases in canopy evapotranspiration resulting in decreased water use by as much as 15% in high ozone years and decreased soil water removal. In addition, ozone treatment resulted in increased sensible heat flux in all years indicative of day-time increase in canopy temperature of up to 0.7 °C.

  2. Fume hoods, open canopy type--their ability to capture pollutants in various environments.

    Science.gov (United States)

    Bender, M

    1979-02-01

    Using field observations, modelling techniques and theoretical analysis, parameters describing the performance and collection efficiency of large industrial canopy fume hoods are established for, a) steady state collection of fume and b) collection of plumes with fluctuating flowrates. Hopper and pool type hoods are investigated. A baffle plate arrangement for placement within hoods is proposed. It prevents recirculation and spillage of fume. Temporary storage of fume surges within the hood is shown to be possible. At a cost of $6 per m3/hr ($10 per ft3/min) of installed fume control system capacity the arrangement promises to save millions of dollars on large new installations and to significantly improve the collection efficiency of many existing systems. A practical application of the results is proposed for the design of electric arc furnace canopy hoods.

  3. Hurricane Effects on Mangrove Canopies Observed from MODIS and SPOT Imagery

    CERN Document Server

    Parenti, Michael

    2014-01-01

    The effects of four hurricanes on protected mangroves in southwest Florida (Katrina and Wilma) and the Yucatan Peninsula (Emily and Dean) were assessed using paired sets of 20m multispectral SPOT and 16-day 500m MODIS images. The normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) were used to assess possible damage to and recovery of mangrove canopies associated with each storm event. The results revealed decreases in the NDVI and EVI of mangrove canopies consistent with storm effects, although the effects in South Florida and Sian Ka'an were highly variable. Hurricane Wilma produced a large decrease in NDVI and EVI although values recovered within a year, suggesting resilience to this storm. Rainfall associated with Hurricane Emily apparently increased mangrove photosynthetic activity owing to the location of landfall outside the study area, the small size of the wind field and the apparent lack of storm surge. MODIS NDVI time series revealed pronounced seasonality in mangrove ...

  4. Five-year measurements of ozone fluxes to a Danish Norway spruce canopy

    DEFF Research Database (Denmark)

    Mikkelsen, Teis Nørgaard; Ro-Poulsen, H.; Hovmand, M.F.

    2004-01-01

    Ozone concentrations and fluxes have been measured continuously during 5 years (1996-2000) by the gradient method in a Norway spruce dominated forest stand in West Jutland, Denmark, planted in 1965. The method has been validated against other methodologies and a relatively good relationship...... was found. The data are analysed to quantify diurnal, seasonal and yearly fluxes, and non-stomatal and stomatal removal are estimated. Monthly means of climatic data are shown, and day and night values of the aerodynamic resistance, r(a), viscous sub-layer resistance, r(b), and the surface or canopy...... resistance, r(c), are presented. The yearly ozone deposition is approximately 126 kg ha(-1). The canopy ozone uptake is highest during the day and during the summer. This is interpreted as increased stomatal uptake and physical and chemical reactions. The daily means of ozone concentration and fluxes...

  5. 基于Canopy的高效K-means算法%Canopy for efficient K-Means

    Institute of Scientific and Technical Information of China (English)

    邱荣太

    2012-01-01

    In this paper, we develop a applicable parallel programming method which based on Map-reduce . A improved K-means algorithm based on Canopy is presented according to it's sensitiveity to the initial centers. Our experimental results show basically linear speedup with an increasing number of processors .%基于Map-reduce的并行编程方法,针对大规模集群多处理器多集群的聚类算法K-means的应用。提出了基于Canopy的改进K-means优化算法。实验结果证明,多核Canopy-K-means聚类算法的运行效率和准确度与处理器核数成线性比例。

  6. USGS Small-scale Dataset - 100-Meter Resolution Tree Canopy of the Conterminous United States 201301 GeoTIFF

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for the conterminous United States, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree...

  7. A joined role of canopy and reversal cells in bone remodeling - Lessons from glucocorticoid-induced osteoporosis

    DEFF Research Database (Denmark)

    Jensen, Pia Rosgaard; Andersen, Thomas Levin; Hauge, Ellen-Margrethe

    2015-01-01

    Successful bone remodeling demands that osteoblasts restitute the bone removed by osteoclasts. In human cancellous bone, a pivotal role in this restitution is played by the canopies covering the bone remodeling surfaces, since disruption of canopies in multiple myeloma, postmenopausal......- and glucocorticoid-induced osteoporosis is associated with the absence of progression of the remodeling cycle to bone formation, i.e. uncoupling. An emerging concept explaining this critical role of canopies is that they represent a reservoir of osteoprogenitors to be delivered to reversal surfaces....... In postmenopausal osteoporosis, this concept is supported by the coincidence between the absence of canopies and scarcity of cells on reversal surfaces together with abortion of the remodeling cycle. Here we tested whether this concept holds true in glucocorticoid-induced osteoporosis. A histomorphometric analysis...

  8. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 2, Northeast United States: CNPY01_2

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into four...

  9. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 4, Southeast United States: CNPY01_4

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into four...

  10. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 3, Southwest United States: CNPY01_3

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into four...

  11. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 1, Northwest United States: CNPY01_1

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into four...

  12. Correlation between absence of bone remodeling compartment canopies, reversal phase arrest, and deficient bone formation in post-menopausal osteoporosis

    DEFF Research Database (Denmark)

    Levin Andersen, Thomas; Hauge, Ellen M; Rolighed, Lars;

    2014-01-01

    Bone remodeling compartments (BRCs) were recently recognized to be present in patients with primary hyperparathyroidism and critical for bone reconstruction in multiple myeloma and endogenous Cushing's syndrome. The BRCs are outlined by a cellular canopy separating the bone remodeling events...

  13. Technological Advancement in Tower-Based Canopy Reflectance Monitoring: The AMSPEC-III System

    Directory of Open Access Journals (Sweden)

    Riccardo Tortini

    2015-12-01

    Full Text Available Understanding plant photosynthesis, or Gross Primary Production (GPP, is a crucial aspect of quantifying the terrestrial carbon cycle. Remote sensing approaches, in particular multi-angular spectroscopy, have proven successful for studying relationships between canopy-reflectance and plant-physiology processes, thus providing a mechanism to scale up. However, many different instrumentation designs exist and few cross-comparisons have been undertaken. This paper discusses the design evolution of the Automated Multiangular SPectro-radiometer for Estimation of Canopy reflectance (AMSPEC series of instruments. Specifically, we assess the performance of the PP-Systems Unispec-DC and Ocean Optics JAZ-COMBO spectro-radiometers installed on an updated, tower-based AMSPEC-III system. We demonstrate the interoperability of these spectro-radiometers, and the results obtained suggest that JAZ-COMBO can successfully be used to substitute more expensive measurement units for detecting and investigating photosynthesis and canopy spectra. We demonstrate close correlations between JAZ-COMBO and Unispec-DC measured canopy radiance (0.75 ≤ R2 ≤ 0.85 and solar irradiance (0.95 ≤ R2 ≤ 0.96 over a three month time span. We also demonstrate close agreement between the bi-directional distribution functions obtained from each instrument. We conclude that cost effective alternatives may allow a network of AMSPEC-III systems to simultaneously monitor various vegetation types in different ecosystems. This will allow to scale and improve our understanding of the interactions between vegetation physiology and spectral characteristics, calibrate broad-scale observations to stand-level measurements, and ultimately lead to improved understanding of changing vegetation spectral features from satellite.

  14. Technological Advancement in Tower-Based Canopy Reflectance Monitoring: The AMSPEC-III System.

    Science.gov (United States)

    Tortini, Riccardo; Hilker, Thomas; Coops, Nicholas C; Nesic, Zoran

    2015-12-19

    Understanding plant photosynthesis, or Gross Primary Production (GPP), is a crucial aspect of quantifying the terrestrial carbon cycle. Remote sensing approaches, in particular multi-angular spectroscopy, have proven successful for studying relationships between canopy-reflectance and plant-physiology processes, thus providing a mechanism to scale up. However, many different instrumentation designs exist and few cross-comparisons have been undertaken. This paper discusses the design evolution of the Automated Multiangular SPectro-radiometer for Estimation of Canopy reflectance (AMSPEC) series of instruments. Specifically, we assess the performance of the PP-Systems Unispec-DC and Ocean Optics JAZ-COMBO spectro-radiometers installed on an updated, tower-based AMSPEC-III system. We demonstrate the interoperability of these spectro-radiometers, and the results obtained suggest that JAZ-COMBO can successfully be used to substitute more expensive measurement units for detecting and investigating photosynthesis and canopy spectra. We demonstrate close correlations between JAZ-COMBO and Unispec-DC measured canopy radiance (0.75 ≤ R² ≤ 0.85) and solar irradiance (0.95 ≤ R² ≤ 0.96) over a three month time span. We also demonstrate close agreement between the bi-directional distribution functions obtained from each instrument. We conclude that cost effective alternatives may allow a network of AMSPEC-III systems to simultaneously monitor various vegetation types in different ecosystems. This will allow to scale and improve our understanding of the interactions between vegetation physiology and spectral characteristics, calibrate broad-scale observations to stand-level measurements, and ultimately lead to improved understanding of changing vegetation spectral features from satellite.

  15. Disease risk in temperate amphibian populations is higher at closed-canopy sites.

    Directory of Open Access Journals (Sweden)

    C Guilherme Becker

    Full Text Available Habitat loss and chytridiomycosis (a disease caused by the chytrid fungus Batrachochytrium dendrobatidis - Bd are major drivers of amphibian declines worldwide. Habitat loss regulates host-pathogen interactions by altering biotic and abiotic factors directly linked to both host and pathogen fitness. Therefore, studies investigating the links between natural vegetation and chytridiomycosis require integrative approaches to control for the multitude of possible interactions of biological and environmental variables in spatial epidemiology. In this study, we quantified Bd infection dynamics across a gradient of natural vegetation and microclimates, looking for causal associations between vegetation cover, multiple microclimatic variables, and pathogen prevalence and infection intensity. To minimize the effects of host diversity in our analyses, we sampled amphibian populations in the Adirondack Mountains of New York State, a region with relatively high single-host dominance. We sampled permanent ponds for anurans, focusing on populations of the habitat generalist frog Lithobates clamitans, and recorded various biotic and abiotic factors that potentially affect host-pathogen interactions: natural vegetation, canopy density, water temperature, and host population and community attributes. We screened for important explanatory variables of Bd infections and used path analyses to statistically test for the strength of cascading effects linking vegetation cover, microclimate, and Bd parameters. We found that canopy density, natural vegetation, and daily average water temperature were the best predictors of Bd. High canopy density resulted in lower water temperature, which in turn predicted higher Bd prevalence and infection intensity. Our results confirm that microclimatic shifts arising from changes in natural vegetation play an important role in Bd spatial epidemiology, with areas of closed canopy favoring Bd. Given increasing rates of anthropogenic

  16. A method for describing the canopy architecture of coppice poplar with allometric relationships.

    Science.gov (United States)

    Casella, Eric; Sinoquet, Hervé

    2003-12-01

    A multi-scale biometric methodology for describing the architecture of fast-growing short-rotation woody crops is used to describe 2-year-old poplar clones during the second rotation. To allow for expressions of genetic variability observed within this species (i.e., growth potential, leaf morphology, coppice and canopy structure), the method has been applied to two clones: Ghoy (Gho) (Populus deltoides Bartr. ex Marsh. x Populus nigra L.) and Trichobel (Tri) (Populus trichocarpa Torr. & A. Gray x Populus trichocarpa). The method operates at the stool level and describes the plant as a collection of components (shoots and branches) described as a collection of metameric elements, themselves defined as a collection of elementary units (internode, petiole, leaf blade). Branching and connection between the plant units (i.e., plant topology) and their spatial location, orientation, size and shape (i.e., plant geometry) describe the plant architecture. The methodology has been used to describe the plant architecture of 15 selected stools per clone over a 5-month period. On individual stools, shoots have been selected from three classes (small, medium and large) spanning the diameter distribution range. Using a multi-scale approach, empirical allometric relationships were used to parameterize elementary units of the plant, topological relationships and geometry (e.g., distribution of shoot diameters on stool, shoot attributes from shoot diameter). The empirical functions form the basis of the 3-D Coppice Poplar Canopy Architecture model (3-D CPCA), which recreates the architecture and canopy structure of fast-growing coppice crops at the plot scale. Model outputs are assessed through visual and quantitative comparisons between actual photographs of the coppice canopy and simulated images. Overall, results indicate a good predictive ability of the 3-D CPCA model.

  17. [Quantitative models between canopy hyperspectrum and its component features at apple tree prosperous fruit stage].

    Science.gov (United States)

    Wang, Ling; Zhao, Geng-xing; Zhu, Xi-cun; Lei, Tong; Dong, Fang

    2010-10-01

    Hyperspectral technique has become the basis of quantitative remote sensing. Hyperspectrum of apple tree canopy at prosperous fruit stage consists of the complex information of fruits, leaves, stocks, soil and reflecting films, which was mostly affected by component features of canopy at this stage. First, the hyperspectrum of 18 sample apple trees with reflecting films was compared with that of 44 trees without reflecting films. It could be seen that the impact of reflecting films on reflectance was obvious, so the sample trees with ground reflecting films should be separated to analyze from those without ground films. Secondly, nine indexes of canopy components were built based on classified digital photos of 44 apple trees without ground films. Thirdly, the correlation between the nine indexes and canopy reflectance including some kinds of conversion data was analyzed. The results showed that the correlation between reflectance and the ratio of fruit to leaf was the best, among which the max coefficient reached 0.815, and the correlation between reflectance and the ratio of leaf was a little better than that between reflectance and the density of fruit. Then models of correlation analysis, linear regression, BP neural network and support vector regression were taken to explain the quantitative relationship between the hyperspectral reflectance and the ratio of fruit to leaf with the softwares of DPS and LIBSVM. It was feasible that all of the four models in 611-680 nm characteristic band are feasible to be used to predict, while the model accuracy of BP neural network and support vector regression was better than one-variable linear regression and multi-variable regression, and the accuracy of support vector regression model was the best. This study will be served as a reliable theoretical reference for the yield estimation of apples based on remote sensing data.

  18. Estimating sources, sinks and fluxes of reactive atmospheric compounds within a forest canopy

    Science.gov (United States)

    Ghannam, K.; Duman, T.; Walker, J. T.; Bash, J. O.; Huang, C. W.; Khlystov, A.; Katul, G. G.

    2015-12-01

    While few dispute the significance of within-canopy sources or sinks of reactive gaseous and particulate compounds, their estimation continues to be the subject of active research and debate. Reactive species undergo turbulent dispersion within an inhomogeneous flow field, and may be subjected to chemical, biological and/or physical deposition, emissions or transformations on leaves, woody elements, and the forest floor. This system involves chemical reactions and biological processes with multiple time scales and represents the terrestrial ecosystem's exposure to nutrient and acid deposition and atmospheric oxidants. The quantification of these processes is a first step in better understanding the ecological impact of air pollution and feedback to atmospheric composition. Hence, it follows that direct measurements of sources or sinks is difficult to conduct in the presence of all these processes. However, mean scalar concentration profiles measured within the canopy can be used to infer the profile distribution of effective sinks and sources if the flow field is known. This is commonly referred to as the 'inverse problem'. In-canopy and above-canopy multi-level concentration measurements of reactive nitrogen compounds (ammonia, nitric acid, nitrous acid), as well as other compounds that are highly reactive to ammonia and its secondary products (hydrochloric acid and sulfur dioxide), are presented within a deciduous second-growth 180 year old oak-hickory forest situated within the Southeastern U.S. Two different approaches are used to solve for the source-sink distribution from the measured mean scalar concentration profiles: (1) an Eulerian high-order closure model that solves the scalar flux budget equation and (2) a new Lagrangian stochastic model that estimates the dispersion matrix. As each of these methods is subject to different assumptions, the combination of the two can be used to constrain the solution to the inverse problem and permit inference on the

  19. Prediction of Canopy Heights over a Large Region Using Heterogeneous Lidar Datasets: Efficacy and Challenges

    Directory of Open Access Journals (Sweden)

    Ranjith Gopalakrishnan

    2015-08-01

    Full Text Available Generating accurate and unbiased wall-to-wall canopy height maps from airborne lidar data for large regions is useful to forest scientists and natural resource managers. However, mapping large areas often involves using lidar data from different projects, with varying acquisition parameters. In this work, we address the important question of whether one can accurately model canopy heights over large areas of the Southeastern US using a very heterogeneous dataset of small-footprint, discrete-return airborne lidar data (with 76 separate lidar projects. A unique aspect of this effort is the use of nationally uniform and extensive field data (~1800 forested plots from the Forest Inventory and Analysis (FIA program of the US Forest Service. Preliminary results are quite promising: Over all lidar projects, we observe a good correlation between the 85th percentile of lidar heights and field-measured height (r = 0.85. We construct a linear regression model to predict subplot-level dominant tree heights from distributional lidar metrics (R2 = 0.74, RMSE = 3.0 m, n = 1755. We also identify and quantify the importance of several factors (like heterogeneity of vegetation, point density, the predominance of hardwoods or softwoods, the average height of the forest stand, slope of the plot, and average scan angle of lidar acquisition that influence the efficacy of predicting canopy heights from lidar data. For example, a subset of plots (coefficient of variation of vegetation heights <0.2 significantly reduces the RMSE of our model from 3.0–2.4 m (~20% reduction. We conclude that when all these elements are factored into consideration, combining data from disparate lidar projects does not preclude robust estimation of canopy heights.

  20. Maximum Entropy Production Modeling of Evapotranspiration Partitioning on Heterogeneous Terrain and Canopy Cover: advantages and limitations.

    Science.gov (United States)

    Gutierrez-Jurado, H. A.; Guan, H.; Wang, J.; Wang, H.; Bras, R. L.; Simmons, C. T.

    2015-12-01

    Quantification of evapotranspiration (ET) and its partition over regions of heterogeneous topography and canopy poses a challenge using traditional approaches. In this study, we report the results of a novel field experiment design guided by the Maximum Entropy Production model of ET (MEP-ET), formulated for estimating evaporation and transpiration from homogeneous soil and canopy. A catchment with complex terrain and patchy vegetation in South Australia was instrumented to measure temperature, humidity and net radiation at soil and canopy surfaces. Performance of the MEP-ET model to quantify transpiration and soil evaporation was evaluated during wet and dry conditions with independently and directly measured transpiration from sapflow and soil evaporation using the Bowen Ratio Energy Balance (BREB). MEP-ET transpiration shows remarkable agreement with that obtained through sapflow measurements during wet conditions, but consistently overestimates the flux during dry periods. However, an additional term introduced to the original MEP-ET model accounting for higher stomatal regulation during dry spells, based on differences between leaf and air vapor pressure deficits and temperatures, significantly improves the model performance. On the other hand, MEP-ET soil evaporation is in good agreement with that from BREB regardless of moisture conditions. The experimental design allows a plot and tree scale quantification of evaporation and transpiration respectively. This study confirms for the first time that the MEP-ET originally developed for homogeneous open bare soil and closed canopy can be used for modeling ET over heterogeneous land surfaces. Furthermore, we show that with the addition of an empirical function simulating the plants ability to regulate transpiration, and based on the same measurements of temperature and humidity, the method can produce reliable estimates of ET during both wet and dry conditions without compromising its parsimony.

  1. Canopy Height Estimation by Characterizing Waveform LiDAR Geometry Based on Shape-Distance Metric

    Directory of Open Access Journals (Sweden)

    Eric Ariel L. Salas

    2016-11-01

    Full Text Available There have been few approaches developed for the estimation of height using waveform LiDAR data. Unlike any existing methods, we illustrate how the new Moment Distance (MD framework can characterize the canopy height based on the geometry and return power of the LiDAR waveform without having to go through curve modeling processes. Our approach offers the possibilities of using the raw waveform data to capture vital information from the variety of complex waveform shapes in LiDAR. We assess the relationship of the MD metrics to the key waveform landmarks—such as locations of peaks, power of returns, canopy heights, and height metrics—using synthetic data and real Laser Vegetation Imaging Sensor (LVIS data. In order to verify the utility of the new approach, we use field measurements obtained through the DESDynI (Deformation, Ecosystem Structure and Dynamics of Ice campaign. Our results reveal that the MDI can capture temporal dynamics of canopy and segregate generations of stands based on curve shapes. The method satisfactorily estimates the canopy height using the synthetic (r2 = 0.40 and the LVIS dataset (r2 = 0.74. The MDI is also comparable with existing RH75 (relative height at 75% and RH50 (relative height at 50% height metrics. Furthermore, the MDI shows better correlations with ground-based measurements than relative height metrics. The MDI performs well at any type of waveform shape. This opens the possibility of looking more closely at single-peaked waveforms that usually carries complex extremes.

  2. Ozone deposition in relation to canopy physiology in a mixed conifer forest in Denmark

    DEFF Research Database (Denmark)

    Ro-Poulsen, H.; Mikkelsen, Teis Nørgaard; Hovmand, M.F.;

    1998-01-01

    In this study CO(2) and H(2)O flux measurements made above a spruce forest was compared with the ozone flux to the canopy during growing season 1995. The fluxes were determined by micro meteorological gradient methods using a 36-m tall meteorological mast. The trees were about 12 m high and air...... uptake seems to follow very well the evapotranspiration. (C) 1998 Elsevier Science Ltd....

  3. Linking canopy phenology to the seasonality of biosphere-atmosphere interactions in a temperate deciduous forest (Invited)

    Science.gov (United States)

    Richardson, A. D.; Toomey, M. P.; Aubrecht, D.; Sonnentag, O.; Ryu, Y.; Hilker, T.

    2013-12-01

    Phenology - the annual rhythm of canopy development and senescence - is a key control on the seasonality of surface-atmosphere fluxes of CO2, water, and energy. Phenology is also a highly sensitive indicator of the biological impacts of climate change. In many biomes, there is strong evidence of trends towards earlier spring onset, and later autumn senescence, over the last four decades. These shifts in phenology may play an imprortant role in mitigating - or amplifying - feedbacks between terrestrial ecosystems and the climate system. To better understand relationships between canopy structure and function in a temperate deciduous forest, we installed a wide array of radiometric instruments and imaging sensors near the top of a 40-m high tower at Harvard Forest beginning in 2011. Our data set includes: - incoming and outgoing visible (including incoming direct and diffuse components), shortwave, and longwave radiation; - narrowband (five visible and three near-infrared channels) canopy reflectance; - leaf area index (LAI, from continuous below-canopy digital cover photography), fraction of absorbed photosynthetically active radiation (fAPAR, from above- and below-canopy quantum sensors), normalized difference vegetation index (NDVI, from broad- and narrow-band radiometric sensors), and photochemical reflectance index (PRI, from narrow-band radiometric sensors); - visible and near-infrared PhenoCam (http://phenocam.sr.unh.edu) canopy imagery; - multi-angular narrowband hyperspectral canopy reflectance (AMSPEC, in 2012); and - beginning in 2013, hyperspectral and thermal canopy imagery. Together with eddy covariance measurements of CO2 and water fluxes from the Harvard Forest AmeriFlux site, located in similar forest about 1 km to the east, on-the-ground visual observations of phenology, and continuous stem diameter measurements with automated band dendrometers, these data provide an unusually detailed view of phenological processes at scales from leaves to trees to

  4. Algorithm for Extracting Digital Terrain Models under Forest Canopy from Airborne LiDAR Data

    Directory of Open Access Journals (Sweden)

    Almasi S. Maguya

    2014-07-01

    Full Text Available Extracting digital elevationmodels (DTMs from LiDAR data under forest canopy is a challenging task. This is because the forest canopy tends to block a portion of the LiDAR pulses from reaching the ground, hence introducing gaps in the data. This paper presents an algorithm for DTM extraction from LiDAR data under forest canopy. The algorithm copes with the challenge of low data density by generating a series of coarse DTMs by using the few ground points available and using trend surfaces to interpolate missing elevation values in the vicinity of the available points. This process generates a cloud of ground points from which the final DTM is generated. The algorithm has been compared to two other algorithms proposed in the literature in three different test sites with varying degrees of difficulty. Results show that the algorithm presented in this paper is more tolerant to low data density compared to the other two algorithms. The results further show that with decreasing point density, the differences between the three algorithms dramatically increased from about 0.5m to over 10m.

  5. Modelling atmospheric dry deposition in urban areas using an urban canopy approach

    Directory of Open Access Journals (Sweden)

    N. Cherin

    2015-03-01

    Full Text Available Atmospheric dry deposition is typically modelled using an average roughness length, which depends on land use. This classical roughness-length approach cannot account for the spatial variability of dry deposition in complex settings such as urban areas. Urban canopy models have been developed to parametrise momentum and heat transfer. We extend this approach here to mass transfer, and a new dry deposition model based on the urban canyon concept is presented. It uses a local mixing-length parametrisation of turbulence within the canopy, and a description of the urban canopy via key parameters to provide spatially distributed dry deposition fluxes. Three different flow regimes are distinguished in the urban canyon depending on the height-to-width ratio of built areas: isolated roughness flow, wake interference flow and skimming flow. Differences between the classical roughness-length model and the model developed here are investigated. Sensitivity to key parameters are discussed. This approach provides spatially distributed dry deposition fluxes that depend on surfaces (streets, walls, roofs and flow regimes (recirculation and ventilation within the urban area.

  6. Modelling atmospheric dry deposition in urban areas using an urban canopy approach

    Directory of Open Access Journals (Sweden)

    N. Cherin

    2014-12-01

    Full Text Available Atmospheric dry deposition is typically modelled using an average roughness length, which depends on land use. This classical roughness-length approach cannot account for the spatial variability of dry deposition in complex settings such as urban areas. Urban canopy models have been developed to parametrise momentum and heat transfer. We extend this approach here to mass transfer and a new dry deposition model based on the urban canyon concept is presented. It uses a local mixing length parametrisation of turbulence within the canopy, and a description of the urban canopy via key parameters to provide spatially-distributed dry deposition fluxes. Three different flow regimes are distinguished in the urban canyon depending on the height-to-width ratio of built areas: isolated roughness flow, wake interference flow and skimming flow. Differences between the classical roughness-length model and the model developed here are investigated. Sensitivity to key parameters are discussed. This approach provides spatially-distributed dry deposition fluxes that depend on surfaces (streets, walls, roofs and flow regimes (recirculation and ventilation within the urban area.

  7. In-canopy gradients, composition, and sources of optically active aerosols over the Amazon forest

    Science.gov (United States)

    Guyon, P.; Graham, B.; Roberts, G. C.; Mayol-Bracero, O. L.; Andreae, M. O.; Artaxo, P.; Maenhaut, W.

    2003-04-01

    As part of the European contribution to the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA-EUSTACH), size-fractionated aerosol samples were collected at a primary rainforest site in the Brazilian Amazon during the wet and dry seasons. Daytime-nighttime segregated sampling was carried out at three different heights (above, within and below canopy level) on a 54 m meteorological tower. The samples were analyzed for up to 19 trace elements, equivalent black carbon (BCe) and mass concentrations. Additionally, measurements of scattering and absorption coefficients were performed. Absolute principal component analysis revealed that the wet and dry season aerosols contained the same three main aerosol components, namely a natural biogenic, a pyrogenic, and a soil dust component, but that these were present in different (absolute and relative) amounts. The elements related to biomass burning and soil dust generally exhibited highest concentrations above the canopy and during daytime, whilst forest-derived aerosol was more concentrated underneath the canopy and during nighttime. These variations can be largely attributed to daytime convective mixing and the formation of a shallow nocturnal boundary layer, along with the possibility of enhanced nighttime release of biogenic aerosol particles. All three components contributed significantly to light extinction, suggesting that, in addition to pyrogenic particles, biogenic and soil dust aerosols must be taken into account when modeling the physical and optical properties of aerosols in forested regions such the Amazon Basin.

  8. Transpiration rates and canopy conductance of Pinus radiata growing with different pasture understories in agroforestry systems.

    Science.gov (United States)

    Miller, Blair J.; Clinton, Peter W.; Buchan, Graeme D.; Robson, A. Bruce

    1998-01-01

    We measured tree transpiration and canopy conductance in Pinus radiata D. Don at two low rainfall sites of differing soil fertility in Canterbury, New Zealand. At the more fertile Lincoln site, we also assessed the effects of two common pasture grasses on tree transpiration and canopy conductance. At the less fertile Eyrewell Forest site, the effect of no understory, and the effects of irrigation in combination with mixtures of grass or legume species were determined. Tree xylem sap flux (F(d)') was measured by the heat pulse method. Total canopy conductance to diffusion of water vapor (G(t)) was calculated by inverting a simplified Penman-Monteith model. The different treatment effects were modeled by the simple decaying exponential relationship G(t) = G(tmax)e((-bD)), where D = air saturation deficit. At the Lincoln site, trees with an understory of cocksfoot had lower F(d)' and G(tmax) than trees with an understory of ryegrass, although the sensitivity of G(t) to increasing D (i.e., the value of b) did not differ between treatments. At the Eyrewell site, irrigation only increased F(d)' in the absence of an understory, whereas the presence of understory vegetation, or lack of irrigation, or both, significantly reduced G(tmax) and increased b. We conclude that the selection of understory species is critical in designing successful agroforestry systems for low rainfall areas.

  9. Crop Ground Cover Fraction and Canopy Chlorophyll Content Mapping using RapidEye imagery

    Science.gov (United States)

    Zillmann, E.; Schonert, M.; Lilienthal, H.; Siegmann, B.; Jarmer, T.; Rosso, P.; Weichelt, T.

    2015-04-01

    Remote sensing is a suitable tool for estimating the spatial variability of crop canopy characteristics, such as canopy chlorophyll content (CCC) and green ground cover (GGC%), which are often used for crop productivity analysis and site-specific crop management. Empirical relationships exist between different vegetation indices (VI) and CCC and GGC% that allow spatial estimation of canopy characteristics from remote sensing imagery. However, the use of VIs is not suitable for an operational production of CCC and GGC% maps due to the limited transferability of derived empirical relationships to other regions. Thus, the operational value of crop status maps derived from remotely sensed data would be much higher if there was no need for reparametrization of the approach for different situations. This paper reports on the suitability of high-resolution RapidEye data for estimating crop development status of winter wheat over the growing season, and demonstrates two different approaches for mapping CCC and GGC%, which do not rely on empirical relationships. The final CCC map represents relative differences in CCC, which can be quickly calibrated to field specific conditions using SPAD chlorophyll meter readings at a few points. The prediction model is capable of predicting SPAD readings with an average accuracy of 77%. The GGC% map provides absolute values at any point in the field. A high R2 value of 80% was obtained for the relationship between estimated and observed GGC%. The mean absolute error for each of the two acquisition dates was 5.3% and 8.7%, respectively.

  10. Using foreground/background analysis to determine leaf and canopy chemistry

    Science.gov (United States)

    Pinzon, J. E.; Ustin, S. L.; Hart, Q. J.; Jacquemoud, S.; Smith, M. O.

    1995-01-01

    Spectral Mixture Analysis (SMA) has become a well established procedure for analyzing imaging spectrometry data, however, the technique is relatively insensitive to minor sources of spectral variation (e.g., discriminating stressed from unstressed vegetation and variations in canopy chemistry). Other statistical approaches have been tried e.g., stepwise multiple linear regression analysis to predict canopy chemistry. Grossman et al. reported that SMLR is sensitive to measurement error and that the prediction of minor chemical components are not independent of patterns observed in more dominant spectral components like water. Further, they observed that the relationships were strongly dependent on the mode of expressing reflectance (R, -log R) and whether chemistry was expressed on a weight (g/g) or are basis (g/sq m). Thus, alternative multivariate techniques need to be examined. Smith et al. reported a revised SMA that they termed Foreground/Background Analysis (FBA) that permits directing the analysis along any axis of variance by identifying vectors through the n-dimensional spectral volume orthonormal to each other. Here, we report an application of the FBA technique for the detection of canopy chemistry using a modified form of the analysis.

  11. An analytical canopy-type model for wind farm-atmosphere interaction

    Science.gov (United States)

    Markfort, C. D.; Zhang, W.; Porte-Agel, F.

    2013-12-01

    We present a new model for the interactions between large-scale wind farms and the atmospheric boundary layer (ABL) based on similarity to canopy flows. Wind farms capture momentum from the atmospheric boundary layer both at the leading edge and from above. Based on our recent findings that turbulent flow in and above wind farms is similar to canopy-type flows, we examine this further with an analytical model that can predict the development length of the wind farm flow as well as vertical momentum absorption. Within the region of flow development, momentum is advected into the wind farm and wake turbulence draws excess momentum in from between turbines. This is characterized by large dispersive fluxes of momentum. Once the flow within the farm is developed, the area-averaged velocity profile exhibits an inflection point, characteristic of canopy-type flows. The inflected velocity profile is associated with the presence of a dominant characteristic turbulence scale, which may be responsible for a significant portion of the vertical momentum flux. Prediction of this scale is useful for determining the amount of available power for harvesting. The new model is tested with results from wind tunnel experiments, which characterize the turbulent flow in and above model wind farms. The model is useful for representing wind farms in meteorological and wind resource assessment models, for optimizing wind turbine spacing and layout, and for assessing the impacts of wind farms on nearby wind resources and the environment.

  12. Characterizing canopy biochemistry from imaging spectroscopy and its application to ecosystem studies

    Science.gov (United States)

    Kokaly, R.F.; Asner, Gregory P.; Ollinger, S.V.; Martin, M.E.; Wessman, C.A.

    2009-01-01

    For two decades, remotely sensed data from imaging spectrometers have been used to estimate non-pigment biochemical constituents of vegetation, including water, nitrogen, cellulose, and lignin. This interest has been motivated by the important role that these substances play in physiological processes such as photosynthesis, their relationships with ecosystem processes such as litter decomposition and nutrient cycling, and their use in identifying key plant species and functional groups. This paper reviews three areas of research to improve the application of imaging spectrometers to quantify non-pigment biochemical constituents of plants. First, we examine recent empirical and modeling studies that have advanced our understanding of leaf and canopy reflectance spectra in relation to plant biochemistry. Next, we present recent examples of how spectroscopic remote sensing methods are applied to characterize vegetation canopies, communities and ecosystems. Third, we highlight the latest developments in using imaging spectrometer data to quantify net primary production (NPP) over large geographic areas. Finally, we discuss the major challenges in quantifying non-pigment biochemical constituents of plant canopies from remotely sensed spectra.

  13. Relative abundance of amphibians in forest canopy gaps of natural origin vs. timber harvest origin

    Directory of Open Access Journals (Sweden)

    Strojny, C. A.

    2010-06-01

    Full Text Available Small-scale canopy gaps created by logging may retain adequate habitat structure to maintain amphibian abundance. We used pitfalls with drift fences to measure relative abundance of amphibians in 44 harvested gaps, 19 natural treefall gaps, and 36 closed-canopy forest plots. Metamorphs had relatively lower capture rates in large harvest gaps for Ambystoma maculatum, Lithobates catesbeianus, L. clamitans, and L. sylvaticus but we did not detect statistically significant (p < 0.1 differences among gap types for Lithobates palustris metamorphs. L. clamitans juveniles and L. sylvaticus juveniles and adults had relatively lower capture rates in large harvest gaps. For juvenile-adult A. maculatum, we caught relatively fewer individuals in all gap types than in closed-canopy areas. Some groups with overall lower capture rates (immature Plethodon cinereus, juvenile L. palustris had mixed differences among gap types, and Notophthalmus viridescens (efts and adult P. cinereus showed no differences among gap types. One species, L. clamitans, was captured more often at gap edges than gap centers. These results suggest that harvest gaps, especially small gaps, provided habitat similar to natural gaps for some, but not all, amphibian species or life-stages.

  14. Canopy Fuel Load Mapping of Mediterranean Pine Sites Based on Individual Tree-Crown Delineation

    Directory of Open Access Journals (Sweden)

    Giorgos Mallinis

    2013-12-01

    Full Text Available This study presents an individual tree-crown-based approach for canopy fuel load estimation and mapping in two Mediterranean pine stands. Based on destructive sampling, an allometric equation was developed for the estimation of crown fuel weight considering only pine crown width, a tree characteristic that can be estimated from passive imagery. Two high resolution images were used originally for discriminating Aleppo and Calabrian pines crown regions through a geographic object based image analysis approach. Subsequently, the crown region images were segmented using a watershed segmentation algorithm and crown width was extracted. The overall accuracy of the tree crown isolation expressed through a perfect match between the reference and the delineated crowns was 34.00% for the Kassandra site and 48.11% for the Thessaloniki site, while the coefficient of determination between the ground measured and the satellite extracted crown width was 0.5. Canopy fuel load values estimated in the current study presented mean values from 1.29 ± 0.6 to 1.65 ± 0.7 kg/m2 similar to other conifers worldwide. Despite the modest accuracies attained in this first study of individual tree crown fuel load mapping, the combination of the allometric equations with satellite-based extracted crown width information, can contribute to the spatially explicit mapping of canopy fuel load in Mediterranean areas. These maps can be used among others in fire behavior prediction, in fuel reduction treatments prioritization and during active fire suppression.

  15. Estimating FPAR of maize canopy using airborne discrete-return LiDAR data.

    Science.gov (United States)

    Luo, Shezhou; Wang, Cheng; Xi, Xiaohuan; Pan, Feifei

    2014-03-10

    The fraction of absorbed photosynthetically active radiation (FPAR) is a key parameter for ecosystem modeling, crop growth monitoring and yield prediction. Ground-based FPAR measurements are time consuming and labor intensive. Remote sensing provides an alternative method to obtain repeated, rapid and inexpensive estimates of FPAR over large areas. LiDAR is an active remote sensing technology and can be used to extract accurate canopy structure parameters. A method to estimating FPAR of maize from airborne discrete-return LiDAR data was developed and tested in this study. The raw LiDAR point clouds were processed to separate ground returns from vegetation returns using a filter method over a maize field in the Heihe River Basin, northwest China. The fractional cover (fCover) of maize canopy was computed using the ratio of canopy return counts or intensity sums to the total of returns or intensities. FPAR estimation models were established based on linear regression analysis between the LiDAR-derived fCover and the field-measured FPAR (R(2) = 0.90, RMSE = 0.032, p LiDAR-predicted FPARs and results show that the LiDAR-predicted FPAR has a high accuracy (R(2) = 0.89, RMSE = 0.034). In summary, this study suggests that the airborne discrete-return LiDAR data could be adopted to accurately estimate FPAR of maize.

  16. Estimating Canopy Gap Fraction Using ICESat GLAS within Australian Forest Ecosystems

    Directory of Open Access Journals (Sweden)

    Craig Mahoney

    2017-01-01

    Full Text Available Spaceborne laser altimetry waveform estimates of canopy Gap Fraction (GF vary with respect to discrete return airborne equivalents due to their greater sensitivity to reflectance differences between canopy and ground surfaces resulting from differences in footprint size, energy thresholding, noise characteristics and sampling geometry. Applying scaling factors to either the ground or canopy portions of waveforms has successfully circumvented this issue, but not at large scales. This study develops a method to scale spaceborne altimeter waveforms by identifying which remotely-sensed vegetation, terrain and environmental attributes are best suited to predicting scaling factors based on an independent measure of importance. The most important attributes were identified as: soil phosphorus and nitrogen contents, vegetation height, MODIS vegetation continuous fields product and terrain slope. Unscaled and scaled estimates of GF are compared to corresponding ALS data for all available data and an optimized subset, where the latter produced most encouraging results (R2 = 0.89, RMSE = 0.10. This methodology shows potential for successfully refining estimates of GF at large scales and identifies the most suitable attributes for deriving appropriate scaling factors. Large-scale active sensor estimates of GF can establish a baseline from which future monitoring investigations can be initiated via upcoming Earth Observation missions.

  17. Canopy growth and density of Wyoming big sagebrush sown with cool-season perennial grasses

    Energy Technology Data Exchange (ETDEWEB)

    Hild, A.L.; Schuman, G.E.; Vicklund, L.E.; Williams, M.I. [University of Wyoming, Laramie, WY (United States). Dept. for Renewable Resources

    2006-07-15

    Post-mining revegetation efforts often require grass seeding and mulch applications to stabilize the soils at the same time as shrub seeding, creating intraspecific competition between seeded shrubs and grasses that is not well understood. In 1999, we initiated a study at the Belle Ayr Coal Mine near Gillette, Wyoming, to evaluate the influence of grass competition on establishment and growth of Wyoming big sagebrush. Combinations of three sagebrush seeding rates (1, 2, and 4 kg pls ha{sup -1}) and seven cool-season perennial grass mixture seeding rates (0, 2, 4, 6, 8, 10, and 14 kg pls ha{sup -1}) were seeded during winter 1998-1999. Shrub density and grass cover were assessed from 1999 to 2004. We monitored sagebrush canopy size in 2001, 2002, and 2004. All sagebrush seeding rates provided shrub densities (>=) 1 shrub m {sup -1} after six growing seasons. Grass production (>=) 75 g m{sup -2} was achieved by seeding grasses at 6 to 8 kg pls ha{sup -1}). Canopy growth of individual sagebrush plants was least in the heaviest grass seeding rate. Reduced grass seeding rates can aid in achieving Wyoming big sagebrush density standards and enhance shrub canopy growth.

  18. Near-continuous thermal monitoring of a diverse tropical forest canopy

    Science.gov (United States)

    Pau, S.; Still, C. J.; Kim, Y.; Detto, M.

    2015-12-01

    Tropical species may be highly sensitive to temperature increases associated with climate change because of their narrow thermal tolerances. Recent work has highlighted the importance of temperature in tropical forest function, however most studies use air temperature measurements from sparse meteorological stations even though surface temperatures are known to deviate from air temperatures. Tropical organisms exist in microclimates that are highly variable in space and time and not easily measured in natural environments. This is in part because of the complex structure of tropical forests and the potential for organisms themselves to modify their own environment. In the case of plants, leaf temperature is linked to the water and surface energy balance of their microenvironment. Here we present results from near-continuous thermal camera monitoring of the forest canopy in Barro Colorado Island, Panama (5-minute intervals for approximately 9 months). We compare daytime (maximum) vs. nighttime (minimum) differences between canopy temperature and air temperature, relative humidity, solar radiation, and precipitation. On average, canopy temperatures are consistently ~2 degrees Celsius higher than air temperatures. These data can paired with flux tower data on-site and used to advance understanding of temperature controls on the structure and function of tropical forests, such as carbon assimilation, phenology, and habitat monitoring, and can be integrated into models to improve predictions of tropical forest response to future climate change.

  19. Polarimetric, Two-Color, Photon-Counting Laser Altimeter Measurements of Forest Canopy Structure

    Science.gov (United States)

    Harding, David J.; Dabney, Philip W.; Valett, Susan

    2011-01-01

    Laser altimeter measurements of forest stands with distinct structures and compositions have been acquired at 532 nm (green) and 1064 nm (near-infrared) wavelengths and parallel and perpendicular polarization states using the Slope Imaging Multi-polarization Photon Counting Lidar (SIMPL). The micropulse, single photon ranging measurement approach employed by SIMPL provides canopy structure measurements with high vertical and spatial resolution. Using a height distribution analysis method adapted from conventional, 1064 nm, full-waveform lidar remote sensing, the sensitivity of two parameters commonly used for above-ground biomass estimation are compared as a function of wavelength. The results for the height of median energy (HOME) and canopy cover are for the most part very similar, indicating biomass estimations using lidars operating at green and near-infrared wavelengths will yield comparable estimates. The expected detection of increasing depolarization with depth into the canopies due to volume multiple-scattering was not observed, possibly due to the small laser footprint and the small detector field of view used in the SIMPL instrument. The results of this work provide pathfinder information for NASA's ICESat-2 mission that will employ a 532 nm, micropulse, photon counting laser altimeter.

  20. Feasibility of Field Evaluation of Rice Nitrogen Status From Reflectance Spectra of Canopy

    Institute of Scientific and Technical Information of China (English)

    WANGRENCAHO; WANGKE; 等

    1998-01-01

    Techniques for measurement of the N status of rice can be an aid to making manaement decisions with economic and environmental implications.A field experiment was conuced to identify spectral variables most sensitive to N deficiency detection in rice canopy with the possibiliy for their use as a management tool. Spectral and agronomic measurements were collected in the evaluation experiment of N status from rice canopy under vive N treatments in a silt loam soil ,Nitroen fertilization effects were seen across the entire wavelength measured .Red refectance decreased and near infrared reflectance increased with increasing N fertilizer application.Spectral differences between treatments were seen throughout the test period.The naer infrared refectnce/red reflectance ration (RVI) differed mored between treatment than between single bands.Variations in canopy reflectances due to other environmental factors were reduced by the use of RVI.In the spectral variables examined ,the RVI separated the treatments most effectively,and three or four treatments can be separated.Differences in spetral responses betwenn the treatments were attributable to leaf area index ,leaf chlorophyll concentration and phtomass,wich all changed with N fertilization.

  1. Asplenium bird’s nest ferns in rainforest canopies are climate-contingent refuges for frogs

    Directory of Open Access Journals (Sweden)

    Brett R. Scheffers

    2014-12-01

    Full Text Available Epiphytes are important for canopy dwelling organisms because they provide a cool and moist microhabitat in the relatively hot and dry canopy. Here we examine whether epiphytic Asplenium ferns act as important habitats for arboreal frogs. We conducted extensive fern and habitat surveys for frogs in the Philippines, and complimented these surveys with roaming day and night canopy surveys to identify the full extent of habitat use across the vertical strata. We artificially dried ferns of various sizes to identify relationships between water and temperature buffering. Ferns are the preferred diurnal microhabitat and breeding habitat for arboreal frogs. A strong positive relationship exists between fern size and frog usage and abundance. Our drying experiments show that large ferns buffer maximum temperatures and reduce variability in temperatures, and buffering is directly linked to their hydration. Frogs are likely using large ferns for their moist, cool, environments for breeding and daytime retreat, which supports the buffered microhabitat hypothesis—these plants promote species coexistence through habitat creation and amelioration of physical stress. However, drying experiments suggest that this buffering is contingent on regular rainfall. Altered rainfall regimes could lead to the unexpected loss of the functional capacity of these important fern habitats.

  2. Diagnosing Model Errors in Canopy-Atmosphere Exchange Using Empirical Orthogonal Functions

    Science.gov (United States)

    Drewry, D.; Albertson, J.

    2004-12-01

    Multi-layer canopy process models (MLCPMs) have been established as tools for estimating local-scale canopy-atmosphere scalar (carbon dioxide, heat and water vapor) exchange as well as testing hypotheses regarding the mechanistic functioning of complex vegetated land surfaces and the interactions between vegetation and the local microenvironment. These model frameworks are composed of a coupled set of component submodels relating radiation attenuation and absorption, photosynthesis, turbulent mixing, stomatal conductance, surface energy balance and soil and subsurface processes. Submodel formulations have been validated for a variety of ecosystems under varying environmental conditions. However, each submodel component requires parameter values that are known to vary seasonally as canopy structure changes, and over shorter periods characterized by shifts in the environmental regime. The temporal dependence of submodel parameters limits application of MLCPMs to short-term integrations for which a specific parameterization can be trusted. We present a novel application of empirical orthogonal function (EOF) analysis to the identification of the primary source of MLCPM error. Carbon dioxide (CO2) concentration profiles, a commonly collected and underutilized data source, are the observed quantity in this analysis. The technique relies on an ensemble of model runs transformed to EOF space to determine the characteristic patterns of model error associated with specific submodel parameters. These patterns provide a basis onto which error residual (modeled - measured) CO2 concentration profiles can be projected to identify the primary source of model error. Synthetic tests and application to field data collected at Duke Forest (North Carolina, USA) are presented.

  3. A Method to Reconstruct the Solar-Induced Canopy Fluorescence Spectrum from Hyperspectral Measurements

    Directory of Open Access Journals (Sweden)

    Feng Zhao

    2014-10-01

    Full Text Available A method for canopy Fluorescence Spectrum Reconstruction (FSR is proposed in this study, which can be used to retrieve the solar-induced canopy fluorescence spectrum over the whole chlorophyll fluorescence emission region from 640–850 nm. Firstly, the radiance of the solar-induced chlorophyll fluorescence (Fs at five absorption lines of the solar spectrum was retrieved by a Spectral Fitting Method (SFM. The Singular Vector Decomposition (SVD technique was then used to extract three basis spectra from a training dataset simulated by the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes. Finally, these basis spectra were linearly combined to reconstruct the Fs spectrum, and the coefficients of them were determined by Weighted Linear Least Squares (WLLS fitting with the five retrieved Fs values. Results for simulated datasets indicate that the FSR method could accurately reconstruct the Fs spectra from hyperspectral measurements acquired by instruments of high Spectral Resolution (SR and Signal to Noise Ratio (SNR. The FSR method was also applied to an experimental dataset acquired in a diurnal experiment. The diurnal change of the reconstructed Fs spectra shows that the Fs radiance around noon was higher than that in the morning and afternoon, which is consistent with former studies. Finally, the potential and limitations of this method are discussed.

  4. Correcting attenuation effects caused by interactions in the forest canopy in full-waveform airborne laser scanner data

    Science.gov (United States)

    Richter, K.; Stelling, N.; Maas, H.-G.

    2014-08-01

    Full-waveform airborne laser scanning offers a great potential for various forestry applications. Especially applications requiring information on the vertical structure of the lower canopy parts benefit from the great amount of information contained in waveform data. To enable the derivation of vertical forest canopy structure, the development of suitable voxel based data analysis methods is straightforward. Beyond extracting additional 3D points, it is very promising to derive the voxel attributes from the digitized waveform directly. For this purpose, the differential backscatter cross sections have to be projected into a Cartesian voxel structure. Thereby the voxel entries represent amplitudes of the cross section and can be interpreted as a local measure for the amount of pulse reflecting matter. However, the "history" of each laser echo pulse is characterized by attenuation effects caused by reflections in higher regions of the crown. As a result, the received waveform signals within the canopy have a lower amplitude than it would be observed for an identical structure without the previous canopy structure interactions (Romanczyk et al., 2012). If the biophysical structure is determined from the raw waveform data, material in the lower parts of the canopy is thus under-represented. To achieve a radiometrically correct voxel space representation the loss of signal strength caused by partial reflections on the path of a laser pulse through the canopy has to be compensated. In this paper, we present an integral approach correcting the waveform at each recorded sample. The basic idea of the procedure is to enhance the waveform intensity values in lower parts of the canopy for portions of the pulse intensity, which have been reflected (and thus blocked) in higher parts of the canopy. The paper will discuss the developed correction method and show results from a validation both with synthetic and real world data.

  5. Interception of the Fukushima reactor accident-derived 137Cs, 134Cs and 131I by coniferous forest canopies

    Science.gov (United States)

    Kato, Hiroaki; Onda, Yuichi; Gomi, Takashi

    2012-10-01

    The Fukushima Daiichi nuclear power plant accident resulted in extensive radioactive contamination of the surrounding forests. In this study, we analyzed fallout 137Cs, 134Cs, and 131I in rainwater, throughfall, and stemflow in coniferous forest plantations immediately after the accident. We show selective fractionation of the deposited radionuclides by the forest canopy and contrasting transfer of radiocesium and 131I from the canopy to the forest floor in association with precipitation. More than 60% of the total deposited radiocesium remained in the canopy after 5 month of the initial fallout, while marked penetration of the initially deposited 131I through the canopy was observed. The half-lives of 137Cs absorbed in the cypress and cedar canopies were calculated as 620 days and 890 days, respectively for the period of 0-160 days. The transfer of the deposited radiocesium from the canopy to the forest floor was slow compared with that of the spruce forest affected by fallout from the Chernobyl nuclear reactor accident.

  6. The Influence of Vegetation Canopy Structure on Active Layer Thaw Within the Sub-Arctic Discontinuous Permafrost Zone

    Science.gov (United States)

    Chasmer, L.; Quinton, W.; Hopkinson, C.; Petrone, R.; Whittington, P.

    2009-05-01

    Much of the sub-arctic discontinuous permafrost zone is dominated by a range in peatland ecosystems, each with their own characteristic soil frost dynamics. Soil thaw within the discontinuous permafrost zones of the Canadian sub-arctic is driven by the surface energy balance. The following study examines the influence of canopy structure on frost table (FT) depth and rates of thaw by: 1. relating measurements of FT depth to canopy structure using airborne scanning light detection and ranging (lidar) and hemispherical photographs taken below vegetated canopies; and 2. quantifying the spatial influences of canopy structural characteristics on the radiation balance (direct and diffuse incident radiation) within raised peat plateaus, connected bogs, fens, and isolated bogs. The results of this study indicate that peat plateaus, being characterised by greater vegetation fractional cover, typically have shallower FT depths (r2 = 0.5, p = 0.03) than locations with lower biomass. Further, average ground surface elevation and canopy height are related to rates of FT thaw (r2 = 0.73, p indicates that rates of thaw at the edges of peat plateaus and areas surrounding isolated bogs will be exacerbated by increased incident radiation and less shadowing by the canopy, leading to the conversion of peat plateaus to fens or bogs. This hypothesis is tested by comparing the change in peat plateau area coverage in 2000 and 2008 using classified IKONOS imagery (2000) and airborne lidar (2008).

  7. The impact of in-canopy wind profile formulations on heat flux estimation using the remote sensing-based two-source model for an open orchard canopy in southern Italy

    Directory of Open Access Journals (Sweden)

    C. Cammalleri

    2010-07-01

    Full Text Available For open orchard and vineyard canopies containing significant fractions of exposed soil (>50%, typical of Mediterranean agricultural regions, the energy balance of the vegetation elements is strongly influenced by heat exchange with the bare soil/substrate. For these agricultural systems a "two-source" approach, where radiation and turbulent exchange between the soil and canopy elements are explicitly modelled, appears to be the only suitable methodology for reliably assessing energy fluxes. In strongly clumped canopies, the effective wind speed profile inside and below the canopy layer can highly influence the partitioning of energy fluxes between the soil and vegetation components. To assess the impact of in-canopy wind profile on model flux estimates, an analysis of three different formulations is presented, including algorithms from Goudriaan (1977, Massman (1987 and Lalic et al. (2003. The in-canopy wind profile formulations are applied to the thermal-based Two-Source Energy Balance (TSEB model developed by Norman et al. (1995 and modified by Kustas and Norman (1999. High resolution airborne remote sensing images, collected over an agricultural area located in the western part of Sicily (Italy comprised primarily of vineyards, olive and citrus orchards, are used to derive all the input parameters need to apply the TSEB. The images were acquired from June to October 2008 and include a relatively wide range of meteorological and soil moisture conditions. A preliminary sensitivity analysis of the three wind profile algorithms highlight the dependence of wind speed just above the soil/substrate to leaf area index and canopy height over the typical canopy properties range of these agricultural area. It is found that differences in wind just above surface among the models is most significant under sparse and medium fractional cover conditions (20–60%. The TSEB model heat flux estimates are compared with micrometeorological measurements from a

  8. Joint leaf chlorophyll and leaf area index retrieval using a regularized canopy reflectance model inversion system

    Science.gov (United States)

    Houborg, R.; McCabe, M. F.; Gitelson, A. A.

    2013-12-01

    Leaf area index (LAI) and leaf chlorophyll (Chl) represent key biophysical and biochemical controls on water, energy and carbon exchange processes in the terrestrial biosphere. In combination LAI and Chl provide critical information on vegetation density and phenology, the vitality of vegetation and photosynthetic functioning, and joint satellite-based retrievals can be used to inform land surface models and reduce uncertainties of model predicted ecosystem fluxes in space and time. Simultaneous retrieval of LAI and Chl from space observations is however extremely challenging as the interference of atmospheric effects, canopy characteristics and background reflectance may confound the detection of relatively subtle differences in canopy reflectance resulting from changes in Chl. Regularization strategies are therefore required to increase robustness and accuracy of retrieved properties and more reliably separate soil, leaf and canopy variables. Here we describe recent refinements to the REGularized canopy reFLECtance model (REGFLEC) retrieval system, which includes enhanced regularization techniques for exploiting ancillary LAI and temporal information derived from multiple satellite scenes over a given growing season. REGFLEC is applied to Landsat time-series data and retrieval results evaluated against in-situ LAI and Chl collected over maize and soybean sites in central Nebraska over a 5-year period (2001-2005). While REGFLEC may provide useful information on the density and vitality of vegetation, the results reflect the challenges associated with accurately extracting the relatively small leaf-level chlorophyll signal from the total satellite signal when using a few standard broad bands available operationally (i.e. blue, green, red and near-infrared) as input to a homogeneous canopy reflectance model. A noteworthy and novel aspect of the REGFLEC approach is the fact that no site-specific data were used to calibrate the model that may be run in a completely

  9. The Effects of Thermal Stratification on Clustering Properties of Canopy Turbulence

    Science.gov (United States)

    Cava, D.; Katul, G. G.

    2009-03-01

    The intermittent structure of turbulence within the canopy sublayer (CSL) is sensitive to the presence of foliage and to the atmospheric stability regime. How much of this intermittency originates from amplitude variability or clustering properties remains a vexing research problem for CSL flows. Using a five-level set of measurements collected within a dense hardwood canopy, the clustering properties of CSL turbulence and their dependence on atmospheric stability are explored using the telegraphic approximation (TA). The binary structure of the TA removes any amplitude variability from turbulent excursions but retains their zero-crossing behaviour, and thereby isolating the role of clustering in intermittency. A relationship between the spectral exponents of the actual and the TA series is derived across a wide range of atmospheric stability regimes and for several flow variables. This relationship is shown to be consistent with a relationship derived for long-memory and monofractal processes such as fractional Brownian motion (fBm). Moreover, it is demonstrated that for the longitudinal and vertical velocity components, the vegetation does not appreciably alter fine-scale clustering but atmospheric stability does. Stable atmospheric stability conditions is characterized by more fine scale clustering when compared to other atmospheric stability regimes. For scalars, fine-scale clustering above the canopy is similar to its velocity counterpart but is significantly increased inside the canopy, especially under stable stratification. Using simplified scaling analysis, it is demonstrated that clustering is much more connected to space than to time within the CSL. When comparing intermittency for flow variables and their TA series, it is shown that for velocity, amplitude variations modulate intermittency for all stability regimes. However, amplitude variations play only a minor role in scalar intermittency. Within the crown region of the canopy, a ‘double regime

  10. The canopy interception-landslide initiation conundrum: insight from a tropical secondary forest in northern Thailand

    Science.gov (United States)

    Sidle, Roy C.; Ziegler, Alan D.

    2017-01-01

    The interception and smoothing effect of forest canopies on pulses of incident rainfall and its delivery to the soil has been suggested as a factor in moderating peak pore water pressure in soil mantles, thus reducing the risk of shallow landslides. Here we provide 3 years of rainfall and throughfall data in a tropical secondary dipterocarp forest characterized by few large trees in northern Thailand, along with selected soil moisture dynamics, to address this issue. Throughfall was an estimated 88 % of rainfall, varying from 86 to 90 % in individual years. Data from 167 events demonstrate that canopy interception was only weakly associated (via a nonlinear relationship) with total event rainfall, but not significantly correlated with duration, mean intensity, or antecedent 2-day precipitation (API2). Mean interception during small events (≤ 35 mm) was 17 % (n = 135 events) compared with only 7 % for large events (> 35 mm; n = 32). Examining small temporal intervals within the largest and highest intensity events that would potentially trigger landslides revealed complex patterns of interception. The tropical forest canopy had little smoothing effect on incident rainfall during the largest events. During events with high peak intensities, high wind speeds, and/or moderate-to-high pre-event wetting, measured throughfall was occasionally higher than rainfall during large event peaks, demonstrating limited buffering. However, in events with little wetting and low-to-moderate wind speed, early event rainfall peaks were buffered by the canopy. As rainfall continued during most large events, there was little difference between rainfall and throughfall depths. A comparison of both rainfall and throughfall depths to conservative mean intensity-duration thresholds for landslide initiation revealed that throughfall exceeded the threshold in 75 % of the events in which rainfall exceeded the threshold for both wet and dry conditions. Throughfall intensity for the 11 largest

  11. Spatial and temporal variation in the canopy cover in a tropical semi-deciduous forest

    Directory of Open Access Journals (Sweden)

    Edmilson Bianchini

    2001-09-01

    Full Text Available This study was developed in the Mata dos Godoy State Park (23° 27’S, 51° 15’W South Brazil which present great environmental heterogeneity when its north portion (ridge is compared with the southern portion (valley, where there are some flooded areas. The forest formation is classified as tropical semi-deciduous forest. Spatial and temporal variations in the degree of the canopy cover were compared at flooded and unflooded sites. The measures were taken seasonally in 100m² plots using a spherical densiometer from spring 1995 to winter 1996. The flooded area was more open and lighter and had a greater spatial and temporal variation in the canopy cover than the unflooded areas. The greater heterogeneity in the flooded area could be due to structural characteristics of the canopy (greater spacing between individual trees, lower canopy and less stratified canopy, more frequent natural disturbances and a greater degree of deciduousness. These causes seemed to be related to the presence of the river and flooding.Este estudo foi desenvolvido no Parque Estadual Mata dos Godoy (23° 27’ S, 51° 15’ W, região Sul do Brasil. O Parque apresenta grande heterogeneidade ambiental quando as partes norte (espigão e sul (fundo de vale são comparadas. A floresta é classificada como tropical semi-decidual. As variações espaciais e temporais no grau de cobertura do dossel foram comparadas em sítios esporadicamente alagáveis e não alagáveis do Parque. Leituras foram realizadas sazonalmente, em parcelas de 100 m², com um densiômetro esférico, da primavera de 1995 até o inverno de 1996. A área alagável apresentou maior variação espacial e temporal na cobertura do dossel do que as áreas não alagáveis, indicando ser mais aberta e mais iluminada. Esta maior heterogeneidade da área alagável pode ser devido às características estruturais do dossel (maior espaçamento entre indivíduos arbóreos, dossel mais baixo e menos estratificado

  12. Interpreting canopy development and physiology using a European phenology camera network at flux sites

    Science.gov (United States)

    Wingate, L.; Ogée, J.; Cremonese, E.; Filippa, G.; Mizunuma, T.; Migliavacca, M.; Moisy, C.; Wilkinson, M.; Moureaux, C.; Wohlfahrt, G.; Hammerle, A.; Hörtnagl, L.; Gimeno, C.; Porcar-Castell, A.; Galvagno, M.; Nakaji, T.; Morison, J.; Kolle, O.; Knohl, A.; Kutsch, W.; Kolari, P.; Nikinmaa, E.; Ibrom, A.; Gielen, B.; Eugster, W.; Balzarolo, M.; Papale, D.; Klumpp, K.; Köstner, B.; Grünwald, T.; Joffre, R.; Ourcival, J.-M.; Hellstrom, M.; Lindroth, A.; George, C.; Longdoz, B.; Genty, B.; Levula, J.; Heinesch, B.; Sprintsin, M.; Yakir, D.; Manise, T.; Guyon, D.; Ahrends, H.; Plaza-Aguilar, A.; Guan, J. H.; Grace, J.

    2015-10-01

    Plant phenological development is orchestrated through subtle changes in photoperiod, temperature, soil moisture and nutrient availability. Presently, the exact timing of plant development stages and their response to climate and management practices are crudely represented in land surface models. As visual observations of phenology are laborious, there is a need to supplement long-term observations with automated techniques such as those provided by digital repeat photography at high temporal and spatial resolution. We present the first synthesis from a growing observational network of digital cameras installed on towers across Europe above deciduous and evergreen forests, grasslands and croplands, where vegetation and atmosphere CO2 fluxes are measured continuously. Using colour indices from digital images and using piecewise regression analysis of time series, we explored whether key changes in canopy phenology could be detected automatically across different land use types in the network. The piecewise regression approach could capture the start and end of the growing season, in addition to identifying striking changes in colour signals caused by flowering and management practices such as mowing. Exploring the dates of green-up and senescence of deciduous forests extracted by the piecewise regression approach against dates estimated from visual observations, we found that these phenological events could be detected adequately (RMSE < 8 and 11 days for leaf out and leaf fall, respectively). We also investigated whether the seasonal patterns of red, green and blue colour fractions derived from digital images could be modelled mechanistically using the PROSAIL model parameterised with information of seasonal changes in canopy leaf area and leaf chlorophyll and carotenoid concentrations. From a model sensitivity analysis we found that variations in colour fractions, and in particular the late spring `green hump' observed repeatedly in deciduous broadleaf canopies

  13. An Automated Comparative Observation System for Sun-Induced Chlorophyll Fluorescence of Vegetation Canopies.

    Science.gov (United States)

    Zhou, Xijia; Liu, Zhigang; Xu, Shan; Zhang, Weiwei; Wu, Jun

    2016-05-27

    Detecting sun-induced chlorophyll fluorescence (SIF) offers a new approach for remote sensing photosynthesis. However, to analyse the response characteristics of SIF under different stress states, a long-term time-series comparative observation of vegetation under different stress states must be carried out at the canopy scale, such that the similarities and differences in SIF change law can be summarized under different time scales. A continuous comparative observation system for vegetation canopy SIF is designed in this study. The system, which is based on a high-resolution spectrometer and an optical multiplexer, can achieve comparative observation of multiple targets. To simultaneously measure the commonly used vegetation index and SIF in the O₂-A and O₂-B atmospheric absorption bands, the following parameters are used: a spectral range of 475.9 to 862.2 nm, a spectral resolution of approximately 0.9 nm, a spectral sampling interval of approximately 0.4 nm, and the signal-to-noise ratio (SNR) can be as high as 1000:1. To obtain data for both the upward radiance of the vegetation canopy and downward irradiance data with a high SNR in relatively short time intervals, the single-step integration time optimization algorithm is proposed. To optimize the extraction accuracy of SIF, the FluorMOD model is used to simulate sets of data according to the spectral resolution, spectral sampling interval and SNR of the spectrometer in this continuous observation system. These data sets are used to determine the best parameters of Fraunhofer Line Depth (FLD), Three FLD (3FLD) and the spectral fitting method (SFM), and 3FLD and SFM are confirmed to be suitable for extracting SIF from the spectral measurements. This system has been used to observe the SIF values in O₂-A and O₂-B absorption bands and some commonly used vegetation index from sweet potato and bare land, the result of which shows: (1) the daily variation trend of SIF value of sweet potato leaves is

  14. Effects of elevated atmospheric CO{sub 2} on canopy transpiration in senescent spring wheat

    Energy Technology Data Exchange (ETDEWEB)

    Grossman, S.; Kimball, B.A.; Hunsaker, D.J.; Long, S.P. et al

    1998-12-31

    The seasonal course of canopy transpiration and the diurnal courses of latent heat flux of a spring wheat crop were simulated for atmospheric CO{sub 2} concentrations of 370 {micro}mol mol{sup {minus}1} and 550 {micro}mol mol{sup {minus}1}. The hourly weather data, soil parameters and the irrigation and fertilizer treatments of the Free-Air Carbon Dioxide Enrichment wheat experiment in Arizona (1992/93) were used to drive the model. The simulation results were tested against field measurements with special emphasis on the period between anthesis and maturity. A model integrating leaf photosynthesis and stomatal conductance was scaled to a canopy level in order to be used in the wheat growth model. The simulated intercellular CO{sub 2} concentration, C{sub i} was determined from the ratio of C{sub i} to the CO{sub 2} concentration at the leaf surface, C{sub s}, the leaf to air specific humidity deficit and a possibly unfulfilled transpiration demand. After anthesis, the measured assimilation rates of the flag leaves decreased more rapidly than their stomatal conductances, leading to a rise in the C{sub i}/C{sub s} ratio. In order to describe this observation, an empirical model approach was developed which took into account the leaf nitrogen content for the calculation of the C{sub i}/C{sub s} ratio. Simulation results obtained with the new model version were in good agreement with the measurements. If changes in the C{sub i}/C{sub s} ratio accorded to the decrease in leaf nitrogen content during leaf senescence were not considered in the model, simulations revealed an underestimation of the daily canopy transpiration of up to twenty percent and a decrease in simulated seasonal canopy transpiration by ten percent. The measured reduction in the seasonal sum of canopy transpiration and soil evaporation owing to CO{sub 2} enrichment, in comparison, was only about five percent.

  15. Forest and Shrub Canopy Structure from Multiangle and High Resolution Passive Remote Sensing

    Science.gov (United States)

    Chopping, M. J.; Wang, Z.; Bull, M. A.; Duchesne, R.; North, M.

    2015-12-01

    The 3-D structure of forest and shrub canopies can be mapped using diverse technologies, with the most advanced being lidar and interferometric radar. Other approaches include various modes of interpretation of multi-angle imagery, high-resolution stereo photogrammetry, plant identification, delineation, and measurement from high-resolution panchromatic imagery, and image texture metrics. While active remote sensing will revolutionize mapping of canopy structure, there are currently limitations. High precision lidar will remain limited geographically until the launch of NASA's innovative Global Ecosystem Dynamics Investigation to the International Space Station in 2019 but even this mission will not see high latitude boreal forest, taiga, or shrubs in tundra because of the orbit. Radar-based methods must be calibrated using high quality data. Imagery from passive imagers acquired at a range of scales therefore has much value if it can be used to provide structure data at broader geographic and temporal scales. Here we report on canopy mapping at scales from 0.5 m to 250 m using high-resolution panchromatic imagery from satellite imagers and NASA's Multiangle Imaging Spectro-Radiometer (MISR), respectively. MISR-based 250 m aboveground biomass maps for the southwestern U.S. were assessed against the radar-derived North American Carbon Program National Biomass and Carbon Dataset 2000, showing good agreement (R2=0.80, RMSE=31 Mg ha-1 for the validation data set; and 0.76 and 18 Mg ha-1, respectively, for 1013 random points). For Oregon forests the best and worst cases were R2=0.90, RMSE=42 Mg ha-1 and R2=0.78, RMSE=62 Mg ha-1, respectively. For improved validation, the CANAPI algorithm was used to interpret high-resolution panchromatic imagery. In Sierra National forest, California, canopy cover estimates agreed well with those from field inventory (R2=0.92, RMSE=0.03). Height estimates gave R2=0.94 and relative RMSE=0.25 m for the range 3 m - 60 m, vs. lidar

  16. An Automated Comparative Observation System for Sun-Induced Chlorophyll Fluorescence of Vegetation Canopies

    Directory of Open Access Journals (Sweden)

    Xijia Zhou

    2016-05-01

    Full Text Available Detecting sun-induced chlorophyll fluorescence (SIF offers a new approach for remote sensing photosynthesis. However, to analyse the response characteristics of SIF under different stress states, a long-term time-series comparative observation of vegetation under different stress states must be carried out at the canopy scale, such that the similarities and differences in SIF change law can be summarized under different time scales. A continuous comparative observation system for vegetation canopy SIF is designed in this study. The system, which is based on a high-resolution spectrometer and an optical multiplexer, can achieve comparative observation of multiple targets. To simultaneously measure the commonly used vegetation index and SIF in the O2-A and O2-B atmospheric absorption bands, the following parameters are used: a spectral range of 475.9 to 862.2 nm, a spectral resolution of approximately 0.9 nm, a spectral sampling interval of approximately 0.4 nm, and the signal-to-noise ratio (SNR can be as high as 1000:1. To obtain data for both the upward radiance of the vegetation canopy and downward irradiance data with a high SNR in relatively short time intervals, the single-step integration time optimization algorithm is proposed. To optimize the extraction accuracy of SIF, the FluorMOD model is used to simulate sets of data according to the spectral resolution, spectral sampling interval and SNR of the spectrometer in this continuous observation system. These data sets are used to determine the best parameters of Fraunhofer Line Depth (FLD, Three FLD (3FLD and the spectral fitting method (SFM, and 3FLD and SFM are confirmed to be suitable for extracting SIF from the spectral measurements. This system has been used to observe the SIF values in O2-A and O2-B absorption bands and some commonly used vegetation index from sweet potato and bare land, the result of which shows: (1 the daily variation trend of SIF value of sweet potato leaves is

  17. A new 500-m resolution map of canopy height for Amazon forest using spaceborne LiDAR and cloud-free MODIS imagery

    Science.gov (United States)

    Sawada, Yoshito; Suwa, Rempei; Jindo, Keiji; Endo, Takahiro; Oki, Kazuo; Sawada, Haruo; Arai, Egidio; Shimabukuro, Yosio Edemir; Celes, Carlos Henrique Souza; Campos, Moacir Alberto Assis; Higuchi, Francisco Gasparetto; Lima, Adriano José Nogueira; Higuchi, Niro; Kajimoto, Takuya; Ishizuka, Moriyoshi

    2015-12-01

    In the present study, we aimed to map canopy heights in the Brazilian Amazon mainly on the basis of spaceborne LiDAR and cloud-free MODIS imagery with a new method (the Self-Organizing Relationships method) for spatial modeling of the LiDAR footprint. To evaluate the general versatility, we compared the created canopy height map with two different canopy height estimates on the basis of our original field study plots (799 plots located in eight study sites) and a previously developed canopy height map. The compared canopy height estimates were obtained by: (1) a stem diameter at breast height (D) - tree height (H) relationship specific to each site on the basis of our original field study, (2) a previously developed D-H model involving environmental and structural factors as explanatory variables (Feldpausch et al., 2011), and (3) a previously developed canopy height map derived from the spaceborne LiDAR data with different spatial modeling method and explanatory variables (Simard et al., 2011). As a result, our canopy height map successfully detected a spatial distribution pattern in canopy height estimates based on our original field study data (r = 0.845, p = 8.31 × 10-3) though our canopy height map showed a poor correlation (r = 0.563, p = 0.146) with the canopy height estimate based on a previously developed model by Feldpausch et al. (2011). We also confirmed that the created canopy height map showed a similar pattern with the previously developed canopy height map by Simard et al. (2011). It was concluded that the use of the spaceborne LiDAR data provides a sufficient accuracy in estimating the canopy height at regional scale.

  18. Experimental study on determining factors of canopy interception using artificial Christmas trees

    Science.gov (United States)

    Murakami, Shigeki; Toba, Tae

    2013-04-01

    Evaporation of canopy interception (CI) is a major component of water balance in forested areas. Theoretically, the evaporation amount is dependent on the tree height, i.e. aerodynamic roughness. Nevertheless, the theory does not always explain the observed results and the observational fact that CI during rainfall is proportional to the rainfall intensity makes the problem paradoxical (Murakami, 2006). The objective of this study is to try to find the determining factors of CI in terms of the stand structure using artificial Christmas trees that is easy to modify the height and tree density. Two kinds of artificial Christmas trees were used: a) 65 cm high with the maximum canopy diameter of 30 cm, and b) 150 cm high with the greatest canopy diameter of 75 cm. We set those trees on three trays and left them outside to measure CI using natural rainfall. Artificial trees a) were set on Tray #1 and #2 measuring 178-cm-square. Artificial trees b) were fixed on Tray #3 with a size of 360-cm-square. Tray #1 was a control and the stand structure was unchanged throughout the experiment, i.e. tree height was 65 cm with 41 stems on the tray. Three experimental runs were conducted; Run #1 and #2 were to compare the effect of stem length (tree height) on CI. Run #3 was to evaluate the effect of thinning. The initial number of trees on each tray was 41 (Run #1 and #2), and it was reduced to 25 after thinning for Tray #2 and #3 (Run #3). At Run #1 tree heights of Tray #2 and #3 were 90 cm and 150 cm (original), respectively, and at Run #2 and #3 they were 120 cm and 240 cm, respectively. In Tray #1 canopy interception rate (IR, the ratio of CI to gross rainfall) was constant (12.1% to 13.3%). IR increased with tree height for each tree, i.e. a) and b). In Tray #2, i.e. tree a), IR increased from 19.7% to 22.8% after thinning, while in Tray #3, i.e. tree b), it diminished from 20.0% to 13.8%. Preliminary analysis showed that hourly CI is clearly proportional to hourly rainfall

  19. Ecohydrological responses of dense canopies to environmental variability: 2. Role of acclimation under elevated CO2

    Science.gov (United States)

    Drewry, D. T.; Kumar, P.; Long, S.; Bernacchi, C.; Liang, X.-Z.; Sivapalan, M.

    2010-12-01

    The ability to accurately predict land-atmosphere exchange of mass, energy, and momentum over the coming century requires the consideration of plant biochemical, ecophysiological, and structural acclimation to modifications of the ambient environment. Amongst the most important environmental changes experienced by terrestrial vegetation over the last century has been the increase in ambient carbon dioxide (CO2) concentrations, with a projected doubling in CO2 from preindustrial levels by the middle of this century. This change in atmospheric composition has been demonstrated to significantly alter a variety of leaf and plant properties across a range of species, with the potential to modify land-atmosphere interactions and their associated feedbacks. Free Air Carbon Enrichment (FACE) technology has provided significant insight into the functioning of vegetation in natural conditions under elevated CO2, but remains limited in its ability to quantify the exchange of CO2, water vapor, and energy at the canopy scale. This paper addresses the roles of ecophysiological, biochemical, and structural plant acclimation on canopy-scale exchange of CO2, water vapor, and energy through the application of a multilayer canopy-root-soil model (MLCan) capable of resolving changes induced by elevated CO2 through the canopy and soil systems. Previous validation of MLCan flux estimates were made for soybean and maize in the companion paper using a record of six growing seasons of eddy covariance data from the Bondville Ameriflux site. Observations of leaf-level photosynthesis, stomatal conductance, and surface temperature collected at the SoyFACE experimental facility in central Illinois provide a basis for examining the ability of MLCan to capture vegetation responses to an enriched CO2 environment. Simulations of control (370 [ppm]) and elevated (550 [ppm]) CO2 environments allow for an examination of the vertical variation and canopy-scale responses of vegetation states and fluxes

  20. Characterising Vegetation Canopies by means of optical data and Microwave Scattering models

    Science.gov (United States)

    Molina, Iñigo; Gonzalez, Constancio; Ormeño, Santiago; Morillo, Carmen; Garcia-Melendez, Eduardo

    One of the main strengths of active microwave remote sensing, in relation to frequency, is its capacity to penetrate vegetation canopies, and reach the ground surface, so that information about the vegetation and hydrological properties of the surface can be drawn. All this infor-mation is gathered in the so called backscattering coefficient (σ 0 ), and in a vegetated medium, this coefficient reveals important information on the vegetation water content, geometry and/or structure of the canopy elements, above ground biomass, and soil roughness and moisture. In the scope of microwave frequencies, modeling the backscattering coefficient of vegetated terrain, involves taking into account scattering models that simulate the soil surface contribution by means of its physical variables, and the vegetation layer, through the knowledge of its biophys-ical properties. Soil surface scattering models require describing parameters of roughness, like soil profile height displacement standard deviation and correlation length, and moisture, which determines sur-face reflective properties. The knowledge of these parameters, allows to establishing surface scattering models with different validity ranges. Some frequently used models are divided into theoretical and empirical models. The vegetation canopy is usually regarded as a homogeneous, or random layer, at a certain height above terrain surface, and it is used to compute the attenuation through this layer. This requires a geometric generalization of the vegetation layer and its constituents, specifying additionally its electromagnetic properties. The main simulation models are based on Radiative Transfer theory, which allows for different approaches and simplifications. In this sense, somo of these models, can be efficiently adapted to any vegetated medium, and the constituents can by approximated by more general variables like Leaf Area Index (LAI), or Water total Content (WTC) of Vegetation. Moreover, in the microwave region

  1. Dry deposition and canopy uptake in Mediterranean holm-oak forests estimated with a canopy budget model: A focus on N estimations

    Science.gov (United States)

    Aguillaume, L.; Izquieta-Rojano, S.; García-Gómez, H.; Elustondo, D.; Santamaría, J. M.; Alonso, R.; Avila, A.

    2017-03-01

    Bulk/wet and throughfall fluxes of major compounds were measured from June 2011 to June 2013 at four Mediterranean holm-oak (Quercus ilex) forests in the Iberian Peninsula. Regression analysis between net throughfall fluxes and precipitation indicated that the best defined canopy process was leaching for K+ and uptake for NH4+ at all sites. A more variable response between sites was found for Na+, Ca2+, SO42- and Cl-, which suggests that the interplay of dry deposition, leaching and uptake at the canopy was different depending on site climate and air quality characteristics. A canopy budget model (CBM) was used to try to discriminate between the canopy processes and enable to estimate dry deposition and uptake fluxes at three of the sites that complied with the model specifications. To derive N uptake, an efficiency factor of NH4+vs. NO3- uptake (xNH4) corresponding to moles of NH4+ taken up for each NO3- mol, has to be determined. Up to now, a value of 6 has been proposed for temperate forests, but we lack information for Mediterranean forests. Experimental determination of N absorption on Quercus ilex seedlings in Spain suggests efficiency factors from 1 to 6. Based on these values, a sensitivity analysis for xNH4 was performed and the NH4sbnd N and NO3sbnd N modeled dry deposition was compared with dry deposition estimated with independent methods (inferential modeling and washing of branches). At two sites in NE Spain under a milder Mediterranean climate, the best match was obtained for xNH4 = 6, corroborating results from European temperate forests. Based on this value, total DIN deposition was 12-13 kg N ha-1 y-1 at these sites. However, for a site in central Spain under drier conditions, variation of the NH4+ efficiency factor had little effect on DD estimates (which ranged from 2 to 2.6 kg N ha-1 y-1 with varying xNH4); when added to wet deposition, this produced a total N deposition in the range 2.6-3.4 kg N ha-1 y-1. Dry deposition was the predominant

  2. Prognostic land surface albedo from a dynamic global vegetation model clumped canopy radiative transfer scheme and satellite-derived geographic forest heights

    Science.gov (United States)

    Kiang, N. Y.; Yang, W.; Ni-Meister, W.; Aleinov, I. D.; Jonas, J.

    2014-12-01

    Vegetation cover was introduced into general circulations models (GCMs) in the 1980's to account for the effect of land surface albedo and water vapor conductance on the Earth's climate. Schemes assigning canopy albedoes by broad biome type have been superceded in 1990's by canopy radiative transfer schemes for homogeneous canopies obeying Beer's Law extinction as a function of leaf area index (LAI). Leaf albedo and often canopy height are prescribed by plant functional type (PFT). It is recognized that this approach does not effectively describe geographic variation in the radiative transfer of vegetated cover, particularly for mixed and sparse canopies. GCM-coupled dynamic global vegetation models (DGVMs) have retained these simple canopy representations, with little further evaluation of their albedos. With the emergence lidar-derived canopy vertical structure data, DGVM modelers are now revisiting albedo simulation. We present preliminary prognostic global land surface albedo produced by the Ent Terrestrial Biosphere Model (TBM), a DGVM coupled to the NASA Goddard Institute for Space Studies (GISS) GCM. The Ent TBM is a next generation DGVM designed to incorporate variation in canopy heights, and mixed and sparse canopies. For such dynamically varying canopy structure, it uses the Analytical Clumped Two-Stream (ACTS) canopy radiative transfer model, which is derived from gap probability theory for canopies of tree cohorts with ellipsoidal crowns, and accounts for soil, snow, and bare stems. We have developed a first-order global vegetation structure data set (GVSD), which gives a year of satellite-derived geographic variation in canopy height, maximum canopy leaf area, and seasonal LAI. Combined with Ent allometric relations, this data set provides population density and foliage clumping within crowns. We compare the Ent prognostic albedoes to those of the previous GISS GCM scheme, and to satellite estimates. The impact of albedo differences on surface

  3. Crown plasticity and competition for canopy space: a new spatially implicit model parameterized for 250 North American tree species.

    Directory of Open Access Journals (Sweden)

    Drew W Purves

    Full Text Available BACKGROUND: Canopy structure, which can be defined as the sum of the sizes, shapes and relative placements of the tree crowns in a forest stand, is central to all aspects of forest ecology. But there is no accepted method for deriving canopy structure from the sizes, species and biomechanical properties of the individual trees in a stand. Any such method must capture the fact that trees are highly plastic in their growth, forming tessellating crown shapes that fill all or most of the canopy space. METHODOLOGY/PRINCIPAL FINDINGS: We introduce a new, simple and rapidly-implemented model--the Ideal Tree Distribution, ITD--with tree form (height allometry and crown shape, growth plasticity, and space-filling, at its core. The ITD predicts the canopy status (in or out of canopy, crown depth, and total and exposed crown area of the trees in a stand, given their species, sizes and potential crown shapes. We use maximum likelihood methods, in conjunction with data from over 100,000 trees taken from forests across the coterminous US, to estimate ITD model parameters for 250 North American tree species. With only two free parameters per species--one aggregate parameter to describe crown shape, and one parameter to set the so-called depth bias--the model captures between-species patterns in average canopy status, crown radius, and crown depth, and within-species means of these metrics vs stem diameter. The model also predicts much of the variation in these metrics for a tree of a given species and size, resulting solely from deterministic responses to variation in stand structure. CONCLUSIONS/SIGNIFICANCE: This new model, with parameters for US tree species, opens up new possibilities for understanding and modeling forest dynamics at local and regional scales, and may provide a new way to interpret remote sensing data of forest canopies, including LIDAR and aerial photography.

  4. A model-based comparison of organic matter dynamics between riparian-forested and open-canopy streams

    Directory of Open Access Journals (Sweden)

    Stenroth Karolina

    2014-06-01

    Full Text Available The food webs of forest streams are primarily based upon inputs of organic matter from adjacent terrestrial ecosystems. However, streams that run through open landscapes generally lack closed riparian canopies, and an increasing number of studies indicate that terrestrial organic matter may be an important resource in these systems as well. Combining key abiotically-controlled factors (stream discharge, water temperature, and litter input rate with relevant biotic processes (e.g. macroinvertebrate CPOM consumption, microbial processing, we constructed a model to predict and contrast organic matter dynamics (including temporal variation in CPOM standing crop, CPOM processing rate, FPOM production, and detritivore biomass in small riparian-forested and open-canopy streams. Our modeled results showed that the standing crop of CPOM was similar between riparian-forested and open-canopy streams, despite considerable differences in litter input rate. This unexpected result was partly due to linkages between CPOM supply and consumer abundance that produced higher detritivore biomass in the forest stream than the open-canopy stream. CPOM standing crop in the forest stream was mainly regulated by top-down consumer control, depressing it to a level similar to that of the open-canopy stream. In contrast, CPOM standing crop in the open-canopy stream was primarily controlled by physical factors (litter input rates and discharge, not consumption. This suggests that abiotic processes (e.g. discharge may play a greater role in limiting detrital resource availability and consumer biomass in open-canopy streams than in forest streams. These model results give insight on functional differences that exists among streams and they can be used to predict effects of anthropogenic influences such as forestry, agriculture, urbanization, and climate change on streams and how riparian management and conservation tools can be employed to mitigate undesirable effects.

  5. Sensitivity of simulated terrestrial carbon assimilation and canopy transpiration to different stomatal conductance and carbon assimilation schemes

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Haishan [Nanjing University of Information Science and Technology, Key Laboratory of Meteorological Disaster of Ministry of Education, Nanjing (China); Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States); Dickinson, Robert E. [Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States); The University of Texas at Austin, Department of Geological Sciences, Austin, TX (United States); Dai, Yongjiu [Beijing Normal University, State Key Laboratory of Earth Surface Processes and Resource Ecology, School of Global Change and Earth System Science, Beijing (China); Zhou, Liming [Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States)

    2011-03-15

    Accurate simulations of terrestrial carbon assimilation and canopy transpiration are needed for both climate modeling and vegetation dynamics. Coupled stomatal conductance and carbon assimilation (A - g{sub s}) models have been widely used as part of land surface parameterizations in climate models to describe the biogeophysical and biogeochemical roles of terrestrial vegetation. Differences in various A - g{sub s} schemes produce substantial differences in the estimation of carbon assimilation and canopy transpiration, as well as in other land-atmosphere fluxes. The terrestrial carbon assimilation and canopy transpiration simulated by two different representative A - g{sub s} schemes, a simple A-g{sub s} scheme adopted from the treatments of the NCAR model (Scheme I) and a two-big-leaf A - g{sub s} scheme newly developed by Dai et al. (J Clim 17:2281-2299, 2004) (Scheme II), are compared via some sensitivity experiments to investigate impacts of different A - g{sub s} schemes on the simulations. Major differences are found in the estimate of canopy carbon assimilation rate, canopy conductance and canopy transpiration between the two schemes, primarily due to differences in (a) functional forms used to estimate parameters for carbon assimilation sub-models, (b) co-limitation methods used to estimate carbon assimilation rate from the three limiting rates, and (c) leaf-to-canopy scaling schemes. On the whole, the differences in the scaling approach are the largest contributor to the simulation discrepancies, but the different methods of co-limitation of assimilation rate also impact the results. Except for a few biomes, the residual effects caused by the different parameter estimations in assimilation sub-models are relatively small. It is also noted that the two-leaf temperature scheme produces distinctly different sunlit and shaded leaf temperatures but has negligible impacts on the simulation of the carbon assimilation. (orig.)

  6. Optical Polarization of Light from a Sorghum Canopy Measured under both a Clear and an Overcast Sky

    Science.gov (United States)

    Vanderbilt, V. C.; Daughtry, C. S. T.; Biehl, L. L.; Dahlgren, R. P.

    2014-12-01

    Introduction:We tested the hypothesis that the optical polarization of the light reflected by a sorghum canopy is due to a Fresnel-type redirection, by sorghum leaf surfaces, of light from an unpolarized light source, the sun or overcast sky, toward the measuring sensor. If it can be shown that the source of the polarization of the light scattered by the sorghum canopy is a first surface, Fresnel-type reflection, then removing this surface reflected light from measurements of canopy reflectance presumably would allow better insight into the biochemical processes such as photosynthesis and metabolism that occur in the interiors of sorghum canopy leaves. Methods:We constructed a tower 5.9m tall in the center of a homogenous sorghum field. We equipped two Barnes MMR radiometers with polarization analyzers on the number 1, 3 and 7 Landsat TM wavelength bands. Positioning the radiometers atop the tower, we collected radiance data in 44 view directions on two days, one day with an overcast sky and the other, clear and sunlit. From the radiance data we calculated the linear polarization of the reflected light for each radiometer wavelength channel and view direction. Results and Discussion: Our experimental results support our hypothesis, showing that the amplitude of the linearly polarized portion of the light reflected by the sorghum canopy varied dramatically with view azimuth direction under a point source, the sun, but the amplitude varied little with view azimuth direction under the hemispherical source, the overcast sky. Under the clear sky, the angle of polarization depended upon the angle of incidence of the sunlight on the leaf, while under the overcast sky the angle of polarization depended upon the zenith view angle. These results support a polarized radiation transport model of the canopy that is based upon a first surface, Fresnel reflection from leaves in the sorghum canopy.

  7. Spider assemblage (Arachnida: Araneae associated with canopies of Vochysia divergens (Vochysiaceae in the northern region of the Brazilian Pantanal

    Directory of Open Access Journals (Sweden)

    Leandro D. Battirola

    Full Text Available ABSTRACT This study describes the composition and temporal variation of the spider assemblage (Arachnida: Araneae associated with canopies of Vochysia divergens Pohl. (Vochysiaceae in the northern region of the Brazilian Pantanal. Three V. divergens plants were sampled in 2004, at each seasonal period of the northern Pantanal (high water, receding water, dry season and rising water, using thermonebulization of the canopies with insecticide, totaling 396 m2 of sampled canopies. Analysis of abundance and richness of spider families were based on Non-Metric Multidimensional Scaling (NMDS and Variance Analysis (ANOVA and MANOVA. A total of 7,193 spiders were collected (6,330 immatures; 88.0%; 863 adults, 12.0% distributed in 30 families. Araneidae (1,676 individuals, Anyphaenidae (1,631 individuals, Salticidae (1,542 individuals and Pisauridae (906 individuals, were predominant, representing 80.0% of the sample. Ten different guilds were registered: aerial hunters, orb-weavers, nocturnal aerial runners and diurnal space web weavers dominated, sharing most ecological niches. The spider assemblage is affected by changes in the habitat structure, especially by the seasonal hydrological regime and variations in the phenology of V. divergens . The assemblage is composed of different groups of spiders. The dominant taxa and behavioral guilds differ in the different seasonal periods. Spiders were more abundant during the dry and rising water seasons, most likely reflecting a greater supply of potential prey, associated with new foliage and flowering at the canopy. The displacement of soil dwelling spiders to the trunks and canopies before and during the seasonal floods can change the structure and composition of the canopy assemblages. Oonopidae, Gnaphosidae and Caponiidae, were more frequent during the rising and high water seasons, which indicates that these taxa use the canopies of V. divergens as a refuge during the seasonal flooding in the Pantanal.

  8. Local flux-profile relationships of wind speed and temperature in a canopy layer in atmospheric stable conditions

    Science.gov (United States)

    Zhang, G.; Leclerc, M. Y.; Karipot, A.

    2010-11-01

    The particularities of the physics of the canopy layer pose challenges to the determination and use of traditional universal functions so helpful in the atmospheric surface layer. Progress toward "universal-like functions" such as those provided by Monin-Obukhov similarity theory for the canopy layer has been modest. One of the challenges lies in that the assumptions underlying Monin-Obukhov similarity theory do not hold within a canopy layer. This paper thus examines the local flux-profile relations for wind (Φm) and for temperature (Φh). It uses three different stability parameters, i.e., h/L(h) at tree top, local z/L(z), and the local bulk Richardson number (Ri), within a tall forest canopy in nighttime stable (indicated by h/L(h) > 0) conditions. Results suggest that the in-canopy Φm can be described using the local Richardson number Ri. Furthermore, Φm is found to increase linearly with Ri in the upper canopy layer for |Ri| 1, |Φm| decreases with |Ri| in a power function, a result consistent for all levels of measurements within the canopy. When both local Φh and local Ri are positive, i.e., the local downward turbulent heat flux is consistent with the local temperature gradient, the local Φh increases with the local Ri when Ri 1. The relationship between local Φh and Ri disappears when counter-gradient heat transfer occurs in strongly stable conditions. A self-correlation analysis is used to examine the influence of self-correlation and the physical meaning of these relationships.

  9. Optical Polarization of Light from a Sorghum Canopy Measured Under Both a Clear and an Overcast Sky

    Science.gov (United States)

    Vanderbilt, Vern; Daughtry, Craig; Biehl, Larry; Dahlgren, Robert

    2014-01-01

    Introduction: We tested the hypothesis that the optical polarization of the light reflected by a sorghum canopy is due to a Fresnel-type redirection, by sorghum leaf surfaces, of light from an unpolarized light source, the sun or overcast sky, toward the measuring sensor. If it can be shown that the source of the polarization of the light scattered by the sorghum canopy is a first surface, Fresnel-type reflection, then removing this surface reflected light from measurements of canopy reflectance presumably would allow better insight into the biochemical processes such as photosynthesis and metabolism that occur in the interiors of sorghum canopy leaves. Methods: We constructed a tower 5.9m tall in the center of a homogenous sorghum field. We equipped two Barnes MMR radiometers with polarization analyzers on the number 1, 3 and 7 Landsat TM wavelength bands. Positioning the radiometers atop the tower, we collected radiance data in 44 view directions on two days, one day with an overcast sky and the other, clear and sunlit. From the radiance data we calculated the linear polarization of the reflected light for each radiometer wavelength channel and view direction. Results and Discussion: Our experimental results support our hypothesis, showing that the amplitude of the linearly polarized portion of the light reflected by the sorghum canopy varied dramatically with view azimuth direction under a point source, the sun, but the amplitude varied little with view azimuth direction under the hemispherical source, the overcast sky. Under the clear sky, the angle of polarization depended upon the angle of incidence of the sunlight on the leaf, while under the overcast sky the angle of polarization depended upon the zenith view angle. These results support a polarized radiation transport model of the canopy that is based upon a first surface, Fresnel reflection from leaves in the sorghum canopy.

  10. Using a stand-level model to predict light absorption in stands with vertically and horizontally heterogeneous canopies

    Directory of Open Access Journals (Sweden)

    David I Forrester

    2014-09-01

    Full Text Available Background Forest ecosystem functioning is strongly influenced by the absorption of photosynthetically active radiation (APAR, and therefore, accurate predictions of APAR are critical for many process-based forest growth models. The Lambert-Beer law can be applied to estimate APAR for simple homogeneous canopies composed of one layer, one species, and no canopy gaps. However, the vertical and horizontal structure of forest canopies is rarely homogeneous. Detailed tree-level models can account for this heterogeneity but these often have high input and computational demands and work on finer temporal and spatial resolutions than required by stand-level growth models. The aim of this study was to test a stand-level light absorption model that can estimate APAR by individual species in mixed-species and multi-layered stands with any degree of canopy openness including open-grown trees to closed canopies. Methods The stand-level model was compared with a detailed tree-level model that has already been tested in mixed-species stands using empirical data. Both models were parameterised for five different forests, including a wide range of species compositions, species proportions, stand densities, crown architectures and canopy structures. Results The stand-level model performed well in all stands except in the stand where extinction coefficients were unusually variable and it appears unlikely that APAR could be predicted in such stands using (tree- or stand-level models that do not allow individuals of a given species to have different extinction coefficients, leaf-area density or analogous parameters. Conclusion This model is parameterised with species-specific information about extinction coefficients and mean crown length, diameter, height and leaf area. It could be used to examine light dynamics in complex canopies and in stand-level growth models.

  11. FLOW VELOCITY AND SURFACE TEMPERATURE EFFECTS ON CONVECTIVE HEAT TRANSFER COEFFICIENT FROM URBAN CANOPY SURFACES BY NUMERICAL SIMULATION

    Directory of Open Access Journals (Sweden)

    Sivaraja Subramania Pillai

    2013-06-01

    Full Text Available This study investigates the effect of flow velocity and building surface temperature effects on Convective Heat Transfer Coefficient (CHTC from urban building surfaces by numerical simulation. The thermal effects produced by geometrical and physical properties of urban areas generate a relatively differential heating and uncomfortable environment compared to rural regions called as Urban Heat Island (UHI phenomena. The urban thermal comfort is directly related to the CHTC from the urban canopy surfaces. This CHTC from urban canopy surfaces expected to depend upon the wind velocity flowing over the urban canopy surfaces, urban canopy configurations, building surface temperature etc. But the most influential parameter on CHTC has not been clarified yet. Urban canopy type experiments in thermally stratified wind tunnel have normally been used to study the heat transfer issues. But, it is not an easy task in wind tunnel experiments to evaluate local CHTC, which vary on individual canyon surfaces such as building roof, walls and ground. Numerical simulation validated by wind tunnel experiments can be an alternative for the prediction of CHTC from building surfaces in an urban area. In our study, wind tunnel experiments were conducted to validate the low-Reynolds-number k-ε model which was used for the evaluation of CHTC from surfaces. The calculated CFD results showed good agreement with experimental results. After this validation, the effects of flow velocity and building surface temperature effects on CHTC from urban building surfaces were investigated. It has been found that the change in velocity remarkably affects the CHTC from urban canopy surfaces and change in surface temperature has almost no effect over the CHTC from urban canopy surfaces.

  12. FLOW VELOCITY AND SURFACE TEMPERATURE EFFECTS ON CONVECTIVE HEAT TRANSFER COEFFICIENT FROM URBAN CANOPY SURFACES BY NUMERICAL SIMULATION

    Directory of Open Access Journals (Sweden)

    Sivaraja Subramania Pillai

    2013-01-01

    Full Text Available This study investigates the effect of flow velocity and building surface temperature effects on Convective Heat Transfer Coefficient (CHTC from urban building surfaces by numerical simulation. The thermal effects produced by geometrical and physical properties of urban areas generate a relatively differential heating and uncomfortable environment compared to rural regions called as Urban Heat Island (UHI phenomena. The urban thermal comfort is directly related to the CHTC from the urban canopy surfaces. This CHTC from urban canopy surfaces expected to depend upon the wind velocity flowing over the urban canopy surfaces, urban canopy configurations, building surface temperature etc. But the most influential parameter on CHTC has not been clarified yet. Urban canopy type experiments in thermally stratified wind tunnel have normally been used to study the heat transfer issues. But, it is not an easy task in wind tunnel experiments to evaluate local CHTC, which vary on individual canyon surfaces such as building roof, walls and ground. Numerical simulation validated by wind tunnel experiments can be an alternative for the prediction of CHTC from building surfaces in an urban area. In our study, wind tunnel experiments were conducted to validate the low-Reynolds-number k- ε model which was used for the evaluation of CHTC from surfaces. The calculated CFD results showed good agreement with experimental results. After this validation, the effects of flow velocity and building surface temperature effects on CHTC from urban building surfaces were investigated. It has been found that the change in velocity remarkably affects the CHTC from urban canopy surfaces and change in surface temperature has almost no effect over the CHTC from urban canopy surfaces.

  13. Estimation of canopy attributes in beech forests using true colour digital images from a small fixed-wing UAV

    Science.gov (United States)

    Chianucci, Francesco; Disperati, Leonardo; Guzzi, Donatella; Bianchini, Daniele; Nardino, Vanni; Lastri, Cinzia; Rindinella, Andrea; Corona, Piermaria

    2016-05-01

    Accurate estimates of forest canopy are essential for the characterization of forest ecosystems. Remotely-sensed techniques provide a unique way to obtain estimates over spatially extensive areas, but their application is limited by the spectral and temporal resolution available from these systems, which is often not suited to meet regional or local objectives. The use of unmanned aerial vehicles (UAV) as remote sensing platforms has recently gained increasing attention, but their applications in forestry are still at an experimental stage. In this study we described a methodology to obtain rapid and reliable estimates of forest canopy from a small UAV equipped with a commercial RGB camera. The red, green and blue digital numbers were converted to the green leaf algorithm (GLA) and to the CIE L*a*b* colour space to obtain estimates of canopy cover, foliage clumping and leaf area index (L) from aerial images. Canopy attributes were compared with in situ estimates obtained from two digital canopy photographic techniques (cover and fisheye photography). The method was tested in beech forests. UAV images accurately quantified canopy cover even in very dense stand conditions, despite a tendency to not detecting small within-crown gaps in aerial images, leading to a measurement of a quantity much closer to crown cover estimated from in situ cover photography. Estimates of L from UAV images significantly agreed with that obtained from fisheye images, but the accuracy of UAV estimates is influenced by the appropriate assumption of leaf angle distribution. We concluded that true colour UAV images can be effectively used to obtain rapid, cheap and meaningful estimates of forest canopy attributes at medium-large scales. UAV can combine the advantage of high resolution imagery with quick turnaround series, being therefore suitable for routine forest stand monitoring and real-time applications.

  14. A joined role of canopy and reversal cells in bone remodeling--lessons from glucocorticoid-induced osteoporosis.

    Science.gov (United States)

    Jensen, Pia Rosgaard; Andersen, Thomas Levin; Hauge, Ellen-Margrethe; Bollerslev, Jens; Delaissé, Jean-Marie

    2015-04-01

    Successful bone remodeling demands that osteoblasts restitute the bone removed by osteoclasts. In human cancellous bone, a pivotal role in this restitution is played by the canopies covering the bone remodeling surfaces, since disruption of canopies in multiple myeloma, postmenopausal- and glucocorticoid-induced osteoporosis is associated with the absence of progression of the remodeling cycle to bone formation, i.e., uncoupling. An emerging concept explaining this critical role of canopies is that they represent a reservoir of osteoprogenitors to be delivered to reversal surfaces. In postmenopausal osteoporosis, this concept is supported by the coincidence between the absence of canopies and scarcity of cells on reversal surfaces together with abortion of the remodeling cycle. Here we tested whether this concept holds true in glucocorticoid-induced osteoporosis. A histomorphometric analysis of iliac crest biopsies from patients exposed to long-term glucocorticoid treatment revealed a subpopulation of reversal surfaces corresponding to the characteristics of arrest found in postmenopausal osteoporosis. Importantly, these arrested reversal surfaces were devoid of canopy coverage in almost all biopsies, and their prevalence correlated with a deficiency in bone forming surfaces. Taken together with the other recent data, the functional link between canopies, reversal surface activity, and the extent of bone formation surface in postmenopausal- and glucocorticoid-induced osteoporosis, supports a model where bone restitution during remodeling demands recruitment of osteoprogenitors from the canopy onto reversal surfaces. These data suggest that securing the presence of functional local osteoprogenitors deserves attention in the search of strategies to prevent the bone loss that occurs during bone remodeling in pathological situations.

  15. Large-scale variation in combined impacts of canopy loss and disturbance on community structure and ecosystem functioning.

    Directory of Open Access Journals (Sweden)

    Tasman P Crowe

    Full Text Available Ecosystems are under pressure from multiple human disturbances whose impact may vary depending on environmental context. We experimentally evaluated variation in the separate and combined effects of the loss of a key functional group (canopy algae and physical disturbance on rocky shore ecosystems at nine locations across Europe. Multivariate community structure was initially affected (during the first three to six months at six locations but after 18 months, effects were apparent at only three. Loss of canopy caused increases in cover of non-canopy algae in the three locations in southern Europe and decreases in some northern locations. Measures of ecosystem functioning (community respiration, gross primary productivity, net primary productivity were affected by loss of canopy at five of the six locations for which data were available. Short-term effects on community respiration were widespread, but effects were rare after 18 months. Functional changes corresponded with changes in community structure and/or species richness at most locations and times sampled, but no single aspect of biodiversity was an effective predictor of longer-term functional changes. Most ecosystems studied were able to compensate in functional terms for impacts caused by indiscriminate physical disturbance. The only consistent effect of disturbance was to increase cover of non-canopy species. Loss of canopy algae temporarily reduced community resistance to disturbance at only two locations and at two locations actually increased resistance. Resistance to disturbance-induced changes in gross primary productivity was reduced by loss of canopy algae at four locations. Location-specific variation in the effects of the same stressors argues for flexible frameworks for the management of marine environments. These results also highlight the need to analyse how species loss and other stressors combine and interact in different environmental contexts.

  16. Seeing the Fields and Forests: Application of Surface-Layer Theory and Flux-Tower Data to Calculating Vegetation Canopy Height

    Science.gov (United States)

    Pennypacker, Sam; Baldocchi, Dennis

    2016-02-01

    Canopy height is an important and dynamic site variable that affects the mass and energy exchanges between vegetation and the atmosphere. We develop a method to estimate canopy height routinely, using surface-layer theory and turbulence measurements made from a collection of flux towers. This tool is based on connecting the logarithmic wind profile generally expected in a neutral surface layer with direct measurements of friction velocity and assumptions about canopy height's relationships with zero-plane displacement and aerodynamic roughness length. Tests over a broad range of canopy types and heights find that calculated values are in good agreement with direct measurements of canopy height, including in a heterogeneous landscape. Based on the various uncertainties associated with our starting assumptions about canopy micrometeorology, we present a blueprint for future work that is necessary for expanding and improving these initial calculations.

  17. Effect of canopy structures and their steric interactions on CO2 sorption behavior of liquid-like nanoparticle organic hybrid materials

    KAUST Repository

    Park, Youngjune

    2014-01-01

    Liquid-like NOHMs with different grafting densities of polymeric canopy were synthesized to evaluate their solvating properties as CO2 solvents. The in situ ATR FT-IR study of NOHMs with linear and branched canopies revealed distinct CO2 capture and corresponding swelling behaviors. These observations suggested that the entropic contribution for CO2 sorption in NOHMs can be tuned via the canopy design. © The Royal Society of Chemistry.

  18. Evaluating radiative transfer schemes treatment of vegetation canopy architecture in land surface models

    Science.gov (United States)

    Braghiere, Renato; Quaife, Tristan; Black, Emily

    2016-04-01

    Incoming shortwave radiation is the primary source of energy driving the majority of the Earth's climate system. The partitioning of shortwave radiation by vegetation into absorbed, reflected, and transmitted terms is important for most of biogeophysical processes, including leaf temperature changes and photosynthesis, and it is currently calculated by most of land surface schemes (LSS) of climate and/or numerical weather prediction models. The most commonly used radiative transfer scheme in LSS is the two-stream approximation, however it does not explicitly account for vegetation architectural effects on shortwave radiation partitioning. Detailed three-dimensional (3D) canopy radiative transfer schemes have been developed, but they are too computationally expensive to address large-scale related studies over long time periods. Using a straightforward one-dimensional (1D) parameterisation proposed by Pinty et al. (2006), we modified a two-stream radiative transfer scheme by including a simple function of Sun zenith angle, so-called "structure factor", which does not require an explicit description and understanding of the complex phenomena arising from the presence of vegetation heterogeneous architecture, and it guarantees accurate simulations of the radiative balance consistently with 3D representations. In order to evaluate the ability of the proposed parameterisation in accurately represent the radiative balance of more complex 3D schemes, a comparison between the modified two-stream approximation with the "structure factor" parameterisation and state-of-art 3D radiative transfer schemes was conducted, following a set of virtual scenarios described in the RAMI4PILPS experiment. These experiments have been evaluating the radiative balance of several models under perfectly controlled conditions in order to eliminate uncertainties arising from an incomplete or erroneous knowledge of the structural, spectral and illumination related canopy characteristics typical

  19. Comparison of vertical resolved leaf area index measurements in an open canopy savannah-type forest

    Science.gov (United States)

    Piayda, Arndt; Cuntz, Matthias; Dubbert, Maren; Werner, Christiane; Pereira, Joao S.

    2013-04-01

    Leaf area index (LAI) is a very important vegetation parameter in soil-vegetation-atmosphere exchange modeling. To represent the structure of ecosystems in vertically distributed modeling, vertical resolved LAI distributions as well as vertically and angular gap fraction (Pgap) distributions are needed, but rarely available. Additionally, former studies neglect woody plant components when using light interception or digital photography based methods for LAI or Pgap observations. This can lead to significantly biased results, particularly in semi-arid savannah-type ecosystems with low LAI values. The objective of this study is to compare three non-destructive LAI measurement techniques in a sparse savannah-type cork oak canopy in central Portugal in order to derive vertically resolved LAI as well as vertically and angular resolved Pgap. Since established canopy analyzers, such as the LAI-2000, rely on diffuse light conditions, which are rarely realized in semi-arid regions, we also employed fast, digital cover photography (DCP) working independently from diffuse light conditions. We used vertical and angular distributed DCP and applied object-based image analysis techniques to exclude woody plant components from Pgap estimation and LAI determination. We compared the results with vertically distributed LAI-2000 measurements, and additionally with vertical estimates based on easily measurable forest canopy parameters. We employed bootstrap resampling methods to determine the accuracy of all measurements depending on sample size. Leaf inclination measurements indicate planophile leaf orientation. Thus LAI was calculated with Pgap and the leaf inclination information. This led to a spatial averaged LAI of 0.52 +- 0.06 for DCP while LAI-2000 measurements resulted in 0.67 +- 0.07. Uncertainty bounds of LAI converge much faster with increasing sample size for the DCP than for the LAI-2000. This allows a more efficient sampling design, which is of great importance in

  20. Scaling up carbonyl sulfide (COS) fluxes from leaf and soil to the canopy

    Science.gov (United States)

    Yang, Fulin; Yakir, Dan

    2016-04-01

    Carbonyl sulfide (COS) with atmospheric concentrations around 500 ppt is an analog of CO2 which can potentially serve as powerful and much needed tracer of photosynthetic CO2 uptake, and global gross primary production (GPP). However, questions remain regarding the application of this approach due to uncertainties in the contributions of different ecosystem components to the canopy scale fluxes of COS. We used laser quantum cascade spectroscopy in combination with soil and branch chambers, and eddy covariance measurements of net ecosystem exchange fluxes of COS and CO2 (NEE) in citrus orchard during the driest summer month to test our ability to integrate the chamber measurements into the ecosystem fluxes. The results indicated that: 1) Soil fluxes showed clear gradient from continuous uptake under the trees in wet soil of up to -4 pmol m-2s-1 (CO2 emission of ~0.5 umol m-2s-1) to emission in dry hot and exposed soil between rows of trees of up to +3 pmol m-2s-1 (CO2 emission of ~11 umol m-2s-1). In all cases a clear correlation between fluxes and soil temperature was observed. 2) At the leaf scale, midday uptake was ~5.5 pmol m-2s-1 (CO2 uptake of ~1.8 umol m-2s-1). Some nighttime COS uptake was observed in the citrus leaves consistent with nocturnal leaf stomatal conductance. Leaf relative uptake (LRU) of COS vs. CO2 was not constant over the diurnal cycle, but showed exponential correlation with photosynthetically active radiation (PAR) during the daytime. 3) At the canopy scale mid-day summer flux reached -12.0 pmol m-2s-1 (NEE ~6 umol m-2s-1) with the diurnal patterns of COS fluxes following those of CO2 fluxes during the daytime, but with small COS uptake fluxes maintained also during the night when significant CO2 emission fluxes were observed. The canopy-scale fluxes always indicated COS uptake, irrespective of the soil emission effects. GPP estimates were consistent with conventional indirect estimates based on NEE and nocturnal measurements. Scaling up

  1. Wet Canopy Evaporation Rate of Three Stands in Western Sichuan,China

    Institute of Scientific and Technical Information of China (English)

    YANG Wanqin; WANG Kaiyun; Seppo Kellom(a)ki; XIAO Ling

    2004-01-01

    The wet canopy evaporation rate (Er) was calculated by Penman-Monteith combination model based on three assumptions and with meteorological variables 2 m above the canopy in three stands, dominated by spruce (SF), fir (FF) and birch (BF) trees, respectively, in the subalpine forests in western Sichuan, China over a growing season. The total amount of the E was 44.5 mm for SF, 88.5 mm for FF and 57.8 mm for BF, accounting for 9.2%, 16.6% and 10.2% of the gross rainfall,respectively, in the measuring period. There was the highest average monthly Er and percentage of E to gross rainfall for FF compared with SF and BF.Mean Er was 0.097 mm h-1 (ranging from 0.028 to 0.487 mm h-1), 0.242 mm h-1 (from 0.068 to 0.711mm h-1) and 0.149 mm h-1 (from 0.060 to 0.576 mm h-1) for SF, FF and BF, respectively. The highest average monthly Er occurred in June was 0.120 mm h-1 for SF, 0.317 mm h-1for FF and 0.169 mm h-1 for BF, and the lowest value in October was 0.083 mm h-1 for SF, 0.187 mm h-1 for FF and 0.101 mm h-1 for BF, respectively. The averages of Er from 8:00 to 16:00 were significantly higher than those from 0:00 to 8:00 and from 16:00 to 0:00 for the three stands. The marked daily and monthly differences of Er were contributable to the variations of solar radiation, air temperature and relative humidity above the canopy.

  2. Study on Effects of Building Morphology on Urban Boundary Layer Using an Urban Canopy Model

    Institute of Scientific and Technical Information of China (English)

    ZHOU Rongwei; JIANG Weimei; HE Xiaofeng; LIU Gang

    2009-01-01

    An urban canopy model is incorporated into the Nanjing University Regional Boundary Layer Model. Temperature simulated by the urban canopy model is in better agreement with the observation, especially in the night time, than that simulated by the traditional slab model. The coupled model is used to study the effects of building morphology on urban boundary layer and meteorological environment by changing urban area, building height, and building density.It is found that when the urban area is expanded, the urban boundary layer heat flux, thermal turbulence, and the turbulent momentum flux and kinetic energy all increase or enhance, causing the surface air temperature to rise up. The stability of urban atmospheric stratification is affected to different extent at different times of the day.When the building height goes up, the aerodynamic roughness height, zero plane displacement height of urban area, and ratio of building height to street width all increase. Therefore, the increase in building height results in the decrease of the surface heat flux, urban surface temperature, mean wind speed, and turbulent kinetic energy in daytime. While at night, as more heat storage is released by higher buildings, thermal turbulence is more active and surface heat flux increases, leading to a higher urban temperature.As the building density increases, the aerodynamic roughness height of urban area decreases, and the effect of urban canopy on radiation strengthens. The increase of building density results in the decrease in urban surface heat flux, momentum flux, and air temperature, the increase in mean wind speed, and the weakening of turbulence in the daytime. While at night, the urban temperature increases due to the release of more heat storage.

  3. Chlorophyll Fluorescence Is a Better Proxy for Sunlit Leaf Than Total Canopy Photosynthesis

    Science.gov (United States)

    Chen, J. M.; Wang, Z.; Zhang, F.; Mo, G.

    2015-12-01

    Chlorophyll fluorescence (CF) results from non-photochemical quenching during plant photosynthesis under excessive radiation. We explore the relationship between gross primary productivity (GPP) and CF using a process ecosystem model, which separates a vegetation canopy into sunlit and shaded leaf groups and simulates the total canopy GPP as the sum of sunlit and shaded leaf GPP. Using GOME-2 and GOSAT data acquired in 2010 over the global land surface, we found that measured CF signals gridded in 1 degree resolution are well correlated with simulated total GPP and its sunlit and shaded components, but the correlation coefficients (R) are largest for the sunlit GPP and smallest for shaded GPP. The seasonal R2 values vary from 0.57 to 0.74, 0.58 to 0.71, and 0.48 to 0.56 for sunlit, total and shaded GPP, respectively. The significance levels for these correlations are all greater than pCASA model results, respectively. These values are similar or larger than those for sunlit GPP simulated in our study, but are considerably larger than those for total GPP in our study because the correlation for total GPP is contaminated by the inclusion of shaded GPP. All these three models use canopy total light use efficiency without considering the differences between sunlit and shaded leaves, and therefore they mostly capture spatio-temporal variations in sunlit GPP. We therefore argue that solar-induced CF measured from vegetation is a better proxy of sunlit GPP than the total GPP, and the use of CF data for assessing the terrestrial carbon cycle can be improved when sunlit and shaded GPP are modelled separately.

  4. Near-surface remote sensing of spatial and temporal variation in canopy phenology.

    Science.gov (United States)

    Richardson, Andrew D; Braswell, Bobby H; Hollinger, David Y; Jenkins, Julian P; Ollinger, Scott V

    2009-09-01

    There is a need to document how plant phenology is responding to global change factors, particularly warming trends. "Near-surface" remote sensing, using radiometric instruments or imaging sensors, has great potential to improve phenological monitoring because automated observations can be made at high temporal frequency. Here we build on previous work and show how inexpensive, networked digital cameras ("webcams") can be used to document spatial and temporal variation in the spring and autumn phenology of forest canopies. We use two years of imagery from a deciduous, northern hardwood site, and one year of imagery from a coniferous, boreal transition site. A quantitative signal is obtained by splitting images into separate red, green, and blue color channels and calculating the relative brightness of each channel for "regions of interest" within each image. We put the observed phenological signal in context by relating it to seasonal patterns of gross primary productivity, inferred from eddy covariance measurements of surface-atmosphere CO2 exchange. We show that spring increases, and autumn decreases, in canopy greenness can be detected in both deciduous and coniferous stands. In deciduous stands, an autumn red peak is also observed. The timing and rate of spring development and autumn senescence varies across the canopy, with greater variability in autumn than spring. Interannual variation in phenology can be detected both visually and quantitatively; delayed spring onset in 2007 compared to 2006 is related to a prolonged cold spell from day 85 to day 110. This work lays the foundation for regional- to continental-scale camera-based monitoring of phenology at network observatory sites, e.g., National Ecological Observatory Network (NEON) or AmeriFlux.

  5. Tree Canopy Cover Mapping Using LiDAR in Urban Barangays of Cebu City, Central Philippines

    Science.gov (United States)

    Ejares, J. A.; Violanda, R. R.; Diola, A. G.; Dy, D. T.; Otadoy, J. B.; Otadoy, R. E. S.

    2016-06-01

    This paper investigates tree canopy cover mapping of urban barangays (smallest administrative division in the Philippines) in Cebu City using LiDAR (Light Detection and Ranging). Object-Based Image Analysis (OBIA) was used to extract tree canopy cover. Multi-resolution segmentation and a series of assign-class algorithm in eCognition software was also performed to extract different land features. Contextual features of tree canopies such as height, area, roundness, slope, length-width and elliptic fit were also evaluated. The results showed that at the time the LiDAR data was collected (June 24, 2014), the tree cover was around 25.11 % (or 15,674,341.8 m2) of the city's urban barangays (or 62,426,064.6 m2). Among all urban barangays in Cebu City, Barangay Busay had the highest cover (55.79 %) while barangay Suba had the lowest (0.8 %). The 16 barangays with less than 10 % tree cover were generally located in the coastal area, presumably due to accelerated urbanization. Thirty-one barangays have tree cover ranging from 10.59--27.3 %. Only 3 barangays (i.e., Lahug, Talamban, and Busay) have tree cover greater than 30 %. The overall accuracy of the analysis was 96.6 % with the Kappa Index of Agreement or KIA of 0.9. From the study, a grouping can be made of the city's urban barangays with regards to tree cover. The grouping will be useful to urban planners not only in allocating budget to the tree planting program of the city but also in planning and creation of urban parks and playgrounds.

  6. Dissipation Intermittency Increases Long-Distance Dispersal of Heavy Particles in the Canopy Sublayer

    Science.gov (United States)

    Duman, Tomer; Trakhtenbrot, Ana; Poggi, Davide; Cassiani, Massimo; Katul, Gabriel G.

    2016-04-01

    The dispersion of heavy particles such as seeds within canopies is evaluated using Lagrangian stochastic trajectory models, laboratory, and field experiments. Inclusion of turbulent kinetic energy dissipation rate intermittency is shown to increase long-distance dispersal (LDD) by contributing to the intermittent ejection of particles to regions of high mean velocity outside the canopy volume. Model evaluation against controlled flume experiments, featuring a dense rod canopy, detailed flow measurements, and imaged trajectories of spherical particles, demonstrates that superimposing a terminal velocity on the fluid velocity is insufficient to determine the particle dispersal kernel. Modifying the trajectory model by adding dissipation intermittency is found to be significant for dispersal predictions along with the addition of inertial and crossing trajectories' effects. Comparison with manual seed-release experiments in a forest using wind-dispersed seeds shows that the model captures most of the measured kernels when accepted uncertainties in plant area index and friction velocity are considered. Unlike the flume experiments, the model modifications for several wind-dispersed seeds have minor effects on short-distance dispersal. A large increase was predicted in LDD when including dissipation intermittency for the forest experiment. The main results suggest that fitting or calibrating models to the `main body' of measured kernels may not offer extrapolating foresight to LDD predictions. As inertial effects were found mostly negligible in the field conditions here, the extended trajectory model requires specifying only the seed's terminal velocity and a constant variance of the normalized dissipation rate. Therefore, the proposed modifications can be readily applied to classical trajectory models so as to improve LDD predictions.

  7. Nitrogen Availability and Forest Canopy Albedo from Leaf to Regional Scales

    Science.gov (United States)

    Ollinger, S. V.; Plourde, L. C.; Martin, M.; Wicklein, H. F.; Haddad, D. M.; Richardson, A. D.; Hollinger, D.

    2009-12-01

    CO2 uptake capacity in temperate and boreal forests has been shown to scale directly with whole-canopy nitrogen concentrations, mirroring a leaf-level trend that has been observed for woody plants worldwide. Recent work has also demonstrated that both CO2 uptake capacity and canopy %N are strongly and positively correlated with shortwave surface albedo. This suggests that variation in nitrogen availability may play an additional, and previously overlooked, role in the climate system via its influence on surface energy exchange as well as via its better-known influence on carbon assimilation. Thus far, the carbon-nitrogen-albedo relationship has been demonstrated at relatively coarse spatial scales that cover broad gradients in climate and forest type. It is unclear whether similar trends occur within local landscapes and within ecosystems other than forests. It is also unclear whether N deposition and N fertilization can cause a shift in albedo stemming from changes in foliar %N. Examining finer-scale patterns in the N-albedo relationship is necessary before we can establish the generality of the observed trends and understand their implications for carbon-nutrient-climate interactions. Here, we expand on the C-N-albedo relationship in several important ways: (1) using fine-scale remote sensing data from the U.S. and Canada, we examined albedo in relation to foliar N and canopy structure at local scales for several well characterized landscapes; (2) we examined changes in both foliar N and albedo along a regional-scale nitrogen deposition gradient; (3) we examined leaf-level changes in %N and albedo in response to experimental N additions, and (4) we conducted a global synthesis of data from FLUXNET to examine the C-N-albedo relationship over a broader range of ecosystems. Results are discussed in the context of improving our understanding of interactions between terrestrial biogeochemistry and climate.

  8. Test of multi-spectral vegetation index for floating and canopy-forming submerged vegetation.

    Science.gov (United States)

    Cho, Hyun Jung; Kirui, Philemon; Natarajan, Harene

    2008-12-01

    Remote sensing of terrestrial vegetation has been successful thanks to the unique spectral characteristics of green vegetation, low reflectance in red and high reflectance in Near-InfraRed (NIR). These spectral characteristics were used to develop vegetation indices, including Normalized Difference Vegetation Index (NDVI). However, the NIR absorption by water and light scattering from suspended particles reduces the practical application of such indices in aquatic vegetation studies, especially for the Submerged Aquatic Vegetation (SAV) that grows below water surface. We experimentally tested if NDVI can be used to depict canopies of aquatic plants in shallow waters. A 100-gallonoutdoor tank was lined with black pond liners, a black panel or SAV shoots were mounted on the bottom, and filled with water up to 0.5 m. We used a GER 1500 spectroradiometer to collect spectral data over floating waterhyacinth (Eichhornia crassipes) and also over the tanks that contain SAV and black panel at varying water depths. The measured upwelling radiance was converted to % reflectance; and we integrated the hyperspectral reflectance to match the Red and NIR bands of three satellite sensors: Landsat 7 ETM, SPOT 5 HRG, and ASTER. NDVI values ranged 0.6-0.65 when the SAV canopy was at the water level, then they decreased linearly (slope of 0.013 NDVI/meter) with water depth increases in clear water. When corrected for water attenuation using the data obtained from the black panel, the NDVI values significantly increased at all depths that we tested (0.1 - 0.5 m). Our results suggest the conventional NDVI: (1) can be used to depict SAV canopies at water surface; (2) is not a good indicator for SAV that is adapted to live underwater or other aquatic plants that are submerged during flooding even at shallow waters (0.3 m); and (3) the index values can significantly improve if information on spectral reflectance attenuation caused by water volume increases is collected simultaneously

  9. Evidence for a Cenozoic radiation of ferns in an angiosperm-dominated canopy.

    Science.gov (United States)

    Schuettpelz, Eric; Pryer, Kathleen M

    2009-07-07

    In today's angiosperm-dominated terrestrial ecosystems, leptosporangiate ferns are truly exceptional--accounting for 80% of the approximately 11,000 nonflowering vascular plant species. Recent studies have shown that this remarkable diversity is mostly the result of a major leptosporangiate radiation beginning in the Cretaceous, following the rise of angiosperms. This pattern is suggestive of an ecological opportunistic response, with the proliferation of flowering plants across the landscape resulting in the formation of many new niches--both on forest floors and within forest canopies--into which leptosporangiate ferns could diversify. At present, one-third of leptosporangiate species grow as epiphytes in the canopies of angiosperm-dominated tropical rain forests. However, we know too little about the evolutionary history of epiphytic ferns to assess whether or not their diversification was in fact linked to the establishment of these forests, as would be predicted by the ecological opportunistic response hypothesis. Here we provide new insight into leptosporangiate diversification and the evolution of epiphytism by integrating a 400-taxon molecular dataset with an expanded set of fossil age constraints. We find evidence for a burst of fern diversification in the Cenozoic, apparently driven by the evolution of epiphytism. Whether this explosive radiation was triggered simply by the establishment of modern angiosperm-dominated tropical rain forest canopies, or spurred on by some other large-scale extrinsic factor (e.g., climate change) remains to be determined. In either case, it is clear that in both the Cretaceous and Cenozoic, leptosporangiate ferns were adept at exploiting newly created niches in angiosperm-dominated ecosystems.

  10. AREA-BASED SNOW DAMAGE CLASSIFICATION OF FOREST CANOPIES USING BI- TEMPORAL LIDAR DATA

    Directory of Open Access Journals (Sweden)

    M. Vastaranta

    2012-09-01

    Full Text Available Multitemporal LiDAR data provide means for mapping structural changes in forest canopies. We demonstrate the use of area-based estimation method for snow damage assessment. Change features of bi-temporal LiDAR point height distributions were used as predictors in combination with in situ training data. In the winter 2009–2010, snow damages occurred in Hyytiälä (62°N, 24°E, southern Finland. Snow load resulted in broken, bent and fallen trees changing the canopy structure. The damages were documented at the tree level at permanent field plots and dense LiDAR data from 2007 and 2010 were used in the analyses. A 5 × 5-m grid was established in one pine%ndash;spruce stand and change metrics from the LiDAR point height distribution were extracted for the cells. Cells were classified as damaged (n = 43 or undamaged (n = 42 based on the field data. Stepwise logistic regression detected the damaged cells with an overall accuracy of 78.6% (Kappa = 0.57. The best predictors were differences in h-distribution percentage points 5, 35, 40, 50 and 70 of first-or-single return data. The tentative results from the single stand suggest that dense bi-temporal LiDAR data and an area-based approach could be feasible in mapping canopy changes. The accuracy of the point h-distribution is dependent on the pulse density per grid cell. Depending on the time span between LiDAR acquisitions, the natural changes of the h- distributions due to tree growth need to be accounted for as well as differences in the scanning geometry, which can substantially affect the LiDAR h-metrics.

  11. Assessing and Correcting Topographic Effects on Forest Canopy Height Retrieval Using Airborne LiDAR Data

    Directory of Open Access Journals (Sweden)

    Zhugeng Duan

    2015-05-01

    Full Text Available Topography affects forest canopy height retrieval based on airborne Light Detection and Ranging (LiDAR data a lot. This paper proposes a method for correcting deviations caused by topography based on individual tree crown segmentation. The point cloud of an individual tree was extracted according to crown boundaries of isolated individual trees from digital orthophoto maps (DOMs. Normalized canopy height was calculated by subtracting the elevation of centres of gravity from the elevation of point cloud. First, individual tree crown boundaries are obtained by carrying out segmentation on the DOM. Second, point clouds of the individual trees are extracted based on the boundaries. Third, precise DEM is derived from the point cloud which is classified by a multi-scale curvature classification algorithm. Finally, a height weighted correction method is applied to correct the topological effects. The method is applied to LiDAR data acquired in South China, and its effectiveness is tested using 41 field survey plots. The results show that the terrain impacts the canopy height of individual trees in that the downslope side of the tree trunk is elevated and the upslope side is depressed. This further affects the extraction of the location and crown of individual trees. A strong correlation was detected between the slope gradient and the proportions of returns with height differences more than 0.3, 0.5 and 0.8 m in the total returns, with coefficient of determination R2 of 0.83, 0.76, and 0.60 (n = 41, respectively.

  12. Assessing and correcting topographic effects on forest canopy height retrieval using airborne LiDAR data.

    Science.gov (United States)

    Duan, Zhugeng; Zhao, Dan; Zeng, Yuan; Zhao, Yujin; Wu, Bingfang; Zhu, Jianjun

    2015-05-26

    Topography affects forest canopy height retrieval based on airborne Light Detection and Ranging (LiDAR) data a lot. This paper proposes a method for correcting deviations caused by topography based on individual tree crown segmentation. The point cloud of an individual tree was extracted according to crown boundaries of isolated individual trees from digital orthophoto maps (DOMs). Normalized canopy height was calculated by subtracting the elevation of centres of gravity from the elevation of point cloud. First, individual tree crown boundaries are obtained by carrying out segmentation on the DOM. Second, point clouds of the individual trees are extracted based on the boundaries. Third, precise DEM is derived from the point cloud which is classified by a multi-scale curvature classification algorithm. Finally, a height weighted correction method is applied to correct the topological effects. The method is applied to LiDAR data acquired in South China, and its effectiveness is tested using 41 field survey plots. The results show that the terrain impacts the canopy height of individual trees in that the downslope side of the tree trunk is elevated and the upslope side is depressed. This further affects the extraction of the location and crown of individual trees. A strong correlation was detected between the slope gradient and the proportions of returns with height differences more than 0.3, 0.5 and 0.8 m in the total returns, with coefficient of determination R2 of 0.83, 0.76, and 0.60 (n = 41), respectively.

  13. Adapting a regularized canopy reflectance model (REGFLEC) for the retrieval challenges of dryland agricultural systems

    KAUST Repository

    Houborg, Rasmus

    2016-08-20

    A regularized canopy reflectance model (REGFLEC) is applied over a dryland irrigated agricultural system in Saudi Arabia for the purpose of retrieving leaf area index (LAI) and leaf chlorophyll content (Chll). To improve the robustness of the retrieved properties, REGFLEC was modified to 1) correct for aerosol and adjacency effects, 2) consider foliar dust effects on modeled canopy reflectances, 3) include spectral information in the red-edge wavelength region, and 4) exploit empirical LAI estimates in the model inversion. Using multi-spectral RapidEye imagery allowed Chll to be retrieved with a Mean Absolute Deviation (MAD) of 7.9 μg cm− 2 (16%), based upon in-situ measurements conducted in fields of alfalfa, Rhodes grass and maize over the course of a growing season. LAI and Chll compensation effects on canopy reflectance were largely avoided by informing the inversion process with ancillary LAI inputs established empirically on the basis of a statistical machine learning technique. As a result, LAI was reproduced with good accuracy, with an overall MAD of 0.42 m2 m− 2 (12.5%). Results highlighted the considerable challenges associated with the translation of at-sensor radiance observations to surface bidirectional reflectances in dryland environments, where issues such as high aerosol loadings and large spatial gradients in surface reflectance from bright desert soils to dark vegetated fields are often present. Indeed, surface reflectances in the visible bands were reduced by up to 60% after correction for such adjacency effects. In addition, dust deposition on leaves required explicit modification of the reflectance sub-model to account for its influence. By implementing these model refinements, REGFLEC demonstrated its utility for within-field characterization of vegetation conditions over the challenging landscapes typical of dryland agricultural regions, offering a means through which improvements can be made in the management of these globally

  14. Impact of Photovoltaic Canopy Shade on Outdoor Thermal Comfort in a Hot Desert City

    Science.gov (United States)

    Middel, Ariane; Selover, Nancy; Hagen, Björn; Chhetri, Nalini

    2016-04-01

    Shade plays an important role in designing pedestrian-friendly outdoor spaces in hot desert cities. This study investigates the impact of photovoltaic canopy shade on thermal comfort through microclimate observations and field surveys at a pedestrian mall on Arizona State University's Tempe campus. Six stationary sensors under solar canopies and in nearby sun-exposed and tree-shaded locations monitored 5-min temperature and humidity for a year. On selected clear calm days representative of each season, we conducted hourly microclimate transects from 7:00AM to 6:00PM and surveyed 1284 people about their thermal perception, comfort, and preferences. Shade lowered thermal sensation votes by approximately 1 point on the Likert scale, increasing thermal comfort in all seasons except winter. The shade type (tree or solar canopy) did not significantly impact perceived comfort, suggesting that artificial and natural shade are equally efficient in semi-arid desert environments. Globe temperature explained 50% of the variance in thermal sensation votes and was the only statistically significant meteorological predictor. Important non-meteorological factors include adaptation level, gender, thermal comfort vote, thermal preference, season, and time of day. A regression of perceived comfort on Physiological Equivalent Temperature yielded a neutral temperature of 28.6°C. The acceptable comfort range was 19.1°C-38.1°C with a preferred temperature of 20.8°C. Respondents exposed to above neutral temperatures felt more comfortable if they had been in air-conditioning 5 minutes prior to the survey, indicating a lagged response to outdoor conditions. Our study highlights the importance of active solar access management in hot urban areas.

  15. Carbonyl sulfide (COS) as a tracer for canopy photosynthesis, transpiration and stomatal conductance: potential and limitations

    Science.gov (United States)

    Wohlfahrt, G.; Brilli, F.; Hörtnagl, L.; Xu, X.; Bingemer, H.; Hansel, A.; Loreto, F.

    2011-12-01

    We review the theoretical basis for the link between the leaf exchange of COS, CO2 and H2O and the assumptions that need to be made in order to use COS as a tracer for canopy net photosynthesis, transpiration and stomatal conductance. The ratios of COS to CO2 and H2O deposition velocities used to this end are shown to vary with the ratio of the internal to ambient CO2 and H2O mole fractions and the relative limitations by boundary layer, stomatal and internal conductance for COS. Back of the envelope calculations suggest these deposition velocity ratios to exhibit considerable variability, in accordance with available empirical literature data, a finding that challenges current parameterisations which treat these as vegetation specific constants. Due to the comparably more conservative nature of the internal to ambient CO2 mole fraction ratio we conclude that COS is a better tracer for CO2 than H2O. Using COS as a tracer for stomatal conductance is hampered by our present poor understanding of the leaf internal conductance to COS. Estimating canopy level CO2 and H2O fluxes requires disentangling leaf COS exchange from other sources/sinks of COS, in particular the soil. Some practical approaches to this end, in analogy to current practises of CO2 flux partitioning, are discussed. We conclude that future priorities for COS research should be to develop a better quantitative understanding of the variability in the ratios of COS to CO2 and H2O deposition velocities and the controlling factors and to develop operational methods for disentangling ecosystem COS exchange into contributions by leaves and other sources/sinks of COS. In order to test our present understanding of COS exchange and its relation to canopy photosynthesis and transpiration integrated studies are needed which concurrently quantify the ecosystem scale CO2, H2O and COS exchange and the corresponding component fluxes.

  16. Mechanistic study of aerosol dry deposition on vegetated canopies; Etude mecaniste du depot sec d'aerosols sur les couverts vegetaux

    Energy Technology Data Exchange (ETDEWEB)

    Petroff, A

    2005-04-15

    The dry deposition of aerosols onto vegetated canopies is modelled through a mechanistic approach. The interaction between aerosols and vegetation is first formulated by using a set of parameters, which are defined at the local scale of one surface. The overall deposition is then deduced at the canopy scale through an up-scaling procedure based on the statistic distribution parameters. This model takes into account the canopy structural and morphological properties, and the main characteristics of the turbulent flow. Deposition mechanisms considered are Brownian diffusion, interception, initial and turbulent impaction, initially with coniferous branches and then with entire canopies of different roughness, such as grass, crop field and forest. (author)

  17. Influence of vegetation structure on lidar-derived canopy height and fractional cover in forested riparian buffers during leaf-off and leaf-on conditions.

    Science.gov (United States)

    Wasser, Leah; Day, Rick; Chasmer, Laura; Taylor, Alan

    2013-01-01

    Estimates of canopy height (H) and fractional canopy cover (FC) derived from lidar data collected during leaf-on and leaf-off conditions are compared with field measurements from 80 forested riparian buffer plots. The purpose is to determine if existing lidar data flown in leaf-off conditions for applications such as terrain mapping can effectively estimate forested riparian buffer H and FC within a range of riparian vegetation types. Results illustrate that: 1) leaf-off and leaf-on lidar percentile estimates are similar to measured heights in all plots except those dominated by deciduous compound-leaved trees where lidar underestimates H during leaf off periods; 2) canopy height models (CHMs) underestimate H by a larger margin compared to percentile methods and are influenced by vegetation type (conifer needle, deciduous simple leaf or deciduous compound leaf) and canopy height variability, 3) lidar estimates of FC are within 10% of plot measurements during leaf-on periods, but are underestimated during leaf-off periods except in mixed and conifer plots; and 4) depth of laser pulse penetration lower in the canopy is more variable compared to top of the canopy penetration which may influence within canopy vegetation structure estimates. This study demonstrates that leaf-off lidar data can be used to estimate forested riparian buffer canopy height within diverse vegetation conditions and fractional canopy cover within mixed and conifer forests when leaf-on lidar data are not available.

  18. Variation in foliar respiration and wood CO2 efflux rates among species and canopy layers in a wet tropical forest.

    Science.gov (United States)

    Asao, Shinichi; Bedoya-Arrieta, Ricardo; Ryan, Michael G

    2015-02-01

    As tropical forests respond to environmental change, autotrophic respiration may consume a greater proportion of carbon fixed in photosynthesis at the expense of growth, potentially turning the forests into a carbon source. Predicting such a response requires that we measure and place autotrophic respiration in a complete carbon budget, but extrapolating measurements of autotrophic respiration from chambers to ecosystem remains a challenge. High plant species diversity and complex canopy structure may cause respiration rates to vary and measurements that do not account for this complexity may introduce bias in extrapolation more detrimental than uncertainty. Using experimental plantations of four native tree species with two canopy layers, we examined whether species and canopy layers vary in foliar respiration and wood CO2 efflux and whether the variation relates to commonly used scalars of mass, nitrogen (N), photosynthetic capacity and wood size. Foliar respiration rate varied threefold between canopy layers, ∼0.74 μmol m(-2) s(-1) in the overstory and ∼0.25 μmol m(-2) s(-1) in the understory, but little among species. Leaf mass per area, N and photosynthetic capacity explained some of the variation, but height explained more. Chamber measurements of foliar respiration thus can be extrapolated to the canopy with rates and leaf area specific to each canopy layer or height class. If area-based rates are sampled across canopy layers, the area-based rate may be regressed against leaf mass per area to derive the slope (per mass rate) to extrapolate to the canopy using the total leaf mass. Wood CO2 efflux varied 1.0-1.6 μmol m(-2) s(-1) for overstory trees and 0.6-0.9 μmol m(-2) s(-1) for understory species. The variation in wood CO2 efflux rate was mostly related to wood size, and little to species, canopy layer or height. Mean wood CO2 efflux rate per surface area, derived by regressing CO2 efflux per mass against the ratio of surface

  19. Estimating the influence of different urban canopy cover types on atmospheric particulate matter (PM10) pollution abatement in London UK.

    Science.gov (United States)

    Tallis, Matthew; Freer-Smith, Peter; Sinnett, Danielle; Aylott, Matthew; Taylor, Gail

    2010-05-01

    In the urban environment atmospheric pollution by PM10 (particulate matter with a diameter less than 10 x 10-6 m) is a problem that can have adverse effects on human health, particularly increasing rates of respiratory disease. The main contributors to atmospheric PM10 in the urban environment are road traffic, industry and power production. The urban tree canopy is a receptor for removing PM10s from the atmosphere due to the large surface areas generated by leaves and air turbulence created by the structure of the urban forest. In this context urban greening has long been known as a mechanism to contribute towards PM10 removal from the air, furthermore, tree canopy cover has a role in contributing towards a more sustainable urban environment. The work reported here has been carried out within the BRIDGE project (SustainaBle uRban plannIng Decision support accountinG for urban mEtabolism). The aim of this project is to assess the fluxes of energy, water, carbon dioxide and particulates within the urban environment and develope a DSS (Decision Support System) to aid urban planners in sustainable development. A combination of published urban canopy cover data from ground, airborne and satellite based surveys was used. For each of the 33 London boroughs the urban canopy was classified to three groups, urban woodland, street trees and garden trees and each group quantified in terms of ground cover. The total [PM10] for each borough was taken from the LAEI (London Atmospheric Emissions Inventory 2006) and the contribution to reducing [PM10] was assessed for each canopy type. Deposition to the urban canopy was assessed using the UFORE (Urban Forest Effects Model) approach. Deposition to the canopy, boundary layer height and percentage reduction of the [PM10] in the atmosphere was assessed using both hourly meterological data and [PM10] and seasonal data derived from annual models. Results from hourly and annual data were compared with measured values. The model was then

  20. Predicting seed yield in perennial ryegrass using repeated canopy reflectance measurements and PLSR

    DEFF Research Database (Denmark)

    Gislum, René; Deleuran, Lise Christina; Boelt, Birte

    2009-01-01

    Repeated canopy reflectance measurements together with partial least-squares regression (PLSR) were used to predict seed yield in perennial ryegrass (Lolium perenne L.). The measurements were performed during the spring and summer growing seasons of 2001 to 2003 in three field experiments...... reflectance measurements was from approximately 600 cumulative growing degree-days (CGDD) to approximately 900 CGDD. This is the period just before and at heading of the seed crop. Furthermore, regression coefficients showed that information about N and water is important. The results support the development...

  1. Using Airborne Lidar for Detection and Morphologic Analysis of Waterbodies Obscured by the Forest Canopy

    Directory of Open Access Journals (Sweden)

    Roman Anamaria

    2015-06-01

    Full Text Available The goal of this study was to map watercourses, watersheds, and small wetland features that are completely obscured by the forest canopy using airborne LiDAR (Light Detection and Ranging within the archaeological site from Porolissum. This technology was used to generate a bare-earth Digital Terrain Model (DTM with 0.5 m spatial resolution in order to map small depressions and concavities across 10 km2 of forested landscape. Although further research is needed to determine the ecological, geological, and archaeological significance of the mapped waterbodies, the general methodology represents important progress in the rapid and accurate detection of wetland habitats in forested landscapes.

  2. Variation in forest canopy nitrogen and albedo in response to N fertilization and elevated CO2

    Science.gov (United States)

    Wicklein, H. F.; Ollinger, S. V.; Martin, M.; Hollinger, D. Y.; Collatz, G. J.

    2009-12-01

    It is important to understand how high levels of nitrogen (N) deposition, through changes in N status, could influence a forest’s albedo and photosynthetic rates, and therefore the forest’s overall feedback (positive or negative) to global warming. Foliar N and albedo have recently been shown to covary at the canopy level across temperate and boreal forests. The purpose of this study is to examine the nature of this relationship from leaf to canopy scales and how it might change in response N and CO2 fertilization. Research was conducted at two long-term forest experimental sites. The chronic N amendment site at Harvard Forest in Petersham, MA includes three treatments: high N (fertilized with 150 kg N ha-1 yr-1), low N (50 kg N ha-1 yr-1), and ambient deposition (around 8 kg N ha-1 yr-1). The Oak Ridge National Environmental Research Park in Oak Ridge, TN includes a Free Air CO2 Enrichment (FACE) site where plots receive either ambient and elevated CO2 (540 ppm), and an N amendment site where plots are either fertilized with N (200 kg N ha-1 yr-1) or receive ambient deposition (10-15 kg N ha-1 yr-1). At Harvard Forest we measured seven black oak (Quercus velutina) and five red maple (Acer rubrum) trees in each treatment plot. At Oak Ridge we measured five sweetgum (Liquidambar styraciflua) trees in each FACE treatment plot, and four sweetgum trees in each N amendment treatment plot. Leaves were collected from two to three canopy heights from trees in each treatment plot. For each tree height we measured reflectance and transmittance spectra for stacks of 1, 2, 4, and 8 leaves, both abaxial and adaxial sides. We also measured N concentration, water content, and leaf mass per unit area (LMA) of the leaves. Canopy-level reflectance was modeled using the Scattering by Arbitrarily Inclined Leaves (SAIL-2) radiative transfer model. Preliminary results show significant differences in average leaf-level reflectance in the N fertilized treatments, with higher NIR

  3. Remote Sensing of Grass Response to Drought Stress Using Spectroscopic Techniques and Canopy Reflectance Model Inversion

    Directory of Open Access Journals (Sweden)

    Bagher Bayat

    2016-07-01

    Full Text Available The aim of this study was to follow the response to drought stress in a Poa pratensis canopy exposed to various levels of soil moisture deficit. We tracked the changes in the canopy reflectance (450–2450 nm and retrieved vegetation properties (Leaf Area Index (LAI, leaf chlorophyll content (Cab, leaf water content (Cw, leaf dry matter content (Cdm and senescent material (Cs during a drought episode. Spectroscopic techniques and radiative transfer model (RTM inversion were employed to monitor the gradual manifestation of drought effects in a laboratory setting. Plots of 21 cm × 14.5 cm surface area with Poa pratensis plants that formed a closed canopy were divided into a well-watered control group and a group subjected to water stress for 36 days. In a regular weekly schedule, canopy reflectance and destructive measurements of LAI and Cab were taken. Spectral analysis indicated the first sign of stress after 4–5 days from the start of the experiment near the water absorption bands (at 1930 nm, 1440 nm and in the red (at 675 nm. Spectroscopic techniques revealed plant stress up to 6 days earlier than visual inspection. Of the water stress-related vegetation indices, the response of Normalized Difference Water Index (NDWI_1241 and Normalized Photochemical Reflectance Index (PRI_norm were significantly stronger in the stressed group than the control. To observe the effects of stress on grass properties during the drought episode, we used the RTMo (RTM of solar and sky radiation model inversion by means of an iterative optimization approach. The performance of the model inversion was assessed by calculating R2 and the Normalized Root Mean Square Error (RMSE between retrieved and measured LAI (R2 = 0.87, NRMSE = 0.18 and Cab (R2 = 0.74, NRMSE = 0.15. All parameters retrieved by model inversion co-varied with soil moisture deficit. However, the first strong sign of water stress on the retrieved grass properties was detected as a change of Cw

  4. Maize Yield Estimation Through the Simulation of Radiation Penetration Into the Canopy.

    Science.gov (United States)

    Musembi, David Kasina

    It is essential for planning purposes to be able to assess or predict the output of vital crops in order to develop strategies to cope with shortfalls or surplusses with sufficient lead time. This is usually done by developing yield prediction models based on well specified production factors. Crop yield results from the interaction among plant, physical and environmental factors. Radiation is a key environmental factor in this regard and the principal driver of the biological system. When all the other conditions are optimum, productivity is a function of the available energy and the size of the plant surface able to trap it. However, the distribution of radiation within the plant canopy is uncertain. The objectives of this study were to determine whether the light extinction coefficients of three maize hybrids of different morphological description are different; whether these coefficients change with time during the growing season; and attempt to establish the nature of the relationships between biomass accumulation and the observed morphological plant characters. The extinction coefficients of the three hybrids were not significantly different. They increased with vegetative growth to reach maxima at anthesis and decreased subsequently as the crops approached physiological maturity. These coefficients were used to fit Beer-Bougher type regressions for predicting light penetration into the various canopy levels. There were significant differences in light penetration, among the hybrids, during the growing season as well as within each day. The largest leaf area (index) and the highest light absorption occurred at the top layer of the canopies. Moreover, the highest light penetration into the canopies does not appear to take place at zenith but seems to occur when the solar elevation and leaf angles reach certain critical values. Leaf area index (LAI) had the greatest effect on light penetration during the growing season while the effect of leaf angle was

  5. A prediction model for wind speed ratios at pedestrian level with simplified urban canopies

    Science.gov (United States)

    Ikegaya, N.; Ikeda, Y.; Hagishima, A.; Razak, A. A.; Tanimoto, J.

    2017-02-01

    The purpose of this study is to review and improve prediction models for wind speed ratios at pedestrian level with simplified urban canopies. We adopted an extensive database of velocity fields under various conditions for arrays consisting of cubes, slender or flattened rectangles, and rectangles with varying roughness heights. Conclusions are summarized as follows: first, a new geometric parameter is introduced as a function of the plan area index and the aspect ratio so as to express the increase in virtual density that causes wind speed reduction. Second, the estimated wind speed ratios in the range 0.05 elements is significant, such as behind a building, the wind speeds are weakly correlated.

  6. Effects of Percent Tree Canopy Density and DEM Misregistration on SRTM/NED Vegetation Height Estimates

    Directory of Open Access Journals (Sweden)

    George Miliaresis

    2009-04-01

    Full Text Available The U.S National Elevation Dataset and the NLCD 2001 landcover data were used to test the correlation between SRTM elevation values and the height of evergreen forest vegetation in the Klamath Mountains of California.Vegetation height estimates (SRTM-NED are valid only for the two out of eight (N, NE, E, SE, S, SW, W, NW geographic directions, due to NED and SRTM grid data misregistration. Penetration depths of SRTM radar were found to linearly correlate to tree percent canopy density.

  7. Thermal bidirectional gap probability model for row crop canopies and validation

    Institute of Scientific and Technical Information of China (English)

    YAN; Guangjian(阎广建); IANG; Lingmei(蒋玲梅); WANG; Jindi(王锦地); CHEN; Liangfu(陈良富); LI; Xiaowen(李小文)

    2003-01-01

    Based on the row structure model of Kimes and the mean gap probability model in single direction, we develop a bidirectional gap probability model for row crop canopi