WorldWideScience

Sample records for canopy

  1. NLCD 2001 - Tree Canopy

    Data.gov (United States)

    Minnesota Department of Natural Resources — The National Land Cover Database 2001 tree canopy layer for Minnesota (mapping zones 39-42, 50-51) was produced through a cooperative project conducted by the...

  2. Canopy Dynamics in Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2010-07-27

    Nanoscale ionic materials (NIMS) are organic - inorganic hybrids in which a core nanostructure is functionalized with a covalently attached corona and an ionically tethered organic canopy. NIMS are engineered to be liquids under ambient conditions in the absence of solvent and are of interest for a variety of applications. We have used nuclear magnetic resonance (NMR) relaxation and pulse-field gradient (PFG) diffusion experiments to measure the canopy dynamics of NIMS prepared from 18-nm silica cores modified by an alkylsilane monolayer possessing terminal sulfonic acid functionality, paired with an amine-terminated ethylene oxide/propylene oxide block copolymer canopy. Carbon NMR studies show that the block copolymer canopy is mobile both in the bulk and in the NIMS and that the fast (ns) dynamics are insensitive to the presence of the silica nanoparticles. Canopy diffusion in the NIMS is slowed relative to the neat canopy, but not to the degree predicted from the diffusion of hard-sphere particles. Canopy diffusion is not restricted to the surface of the nanoparticles and shows unexpected behavior upon addition of excess canopy. Taken together, these data indicate that the liquid-like behavior in NIMS is due to rapid exchange of the block copolymer canopy between the ionically modified nanoparticles. © 2010 American Chemical Society.

  3. Canopy Structure in Relation to Rainfall Interception

    Science.gov (United States)

    Fathizadeh, Omid; Mohsen Hosseini, Seyed; Keim, Richard

    2016-04-01

    Spatial variation of throughfall (TF) is linked to canopy structure. The effects of canopy structure on the spatial redistribution of rainfall in deciduous stands remains poorly documented. Therefore, the objective of this study is to evaluate the influence of canopy structure such as stand density on the partitioning of incident rainfall when passing through the canopy of Brant's oak (Quercus branti) forest stands. The study site is the Zagros forests in the western Iranian state of Ilam, protected forests of Dalab region. Twelve TF plots (50 m × 50 m) with 30 gauges randomly placed within each plot were established. Interception loss was computed as the difference between rain and TF. Canopy cover (%) and leaf area index (LAI, m2 m‑2) were estimated from the analysis of hemispherical photographs obtained during the fully leafed period. Relative interception varied from ˜4% at 0.1 LAI and canopy cover of 10% to ˜25% at 1.5 LAI and canopy cover of 65%. Interception represents a significant component of the seasonal water balance of oak forests, particularly in the case of intensive plantings. Keywords: Canopy Structure, Rainfall redistribution, Zagros forests, Quercus branti

  4. Nondestructive, stereological estimation of canopy surface area

    DEFF Research Database (Denmark)

    Wulfsohn, Dvora-Laio; Sciortino, Marco; Aaslyng, Jesper M.;

    2010-01-01

    We describe a stereological procedure to estimate the total leaf surface area of a plant canopy in vivo, and address the problem of how to predict the variance of the corresponding estimator. The procedure involves three nested systematic uniform random sampling stages: (i) selection of plants from...... is high. Using a grid intensity of 1.76 cm2/point we estimated plant and canopy surface areas with accuracies similar to or better than those obtained using image analysis and a commercial leaf area meter. For canopy surface areas of approximately 1 m2 (10 plants), the fractionator leaf approach...... a canopy using the smooth fractionator, (ii) sampling of leaves from the selected plants using the fractionator, and (iii) area estimation of the sampled leaves using point counting. We apply this procedure to estimate the total area of a chrysanthemum (Chrysanthemum morifolium L.) canopy and evaluate both...

  5. Spatio-Temporal Canopy Complexity and Leaf Acclimation to Variable Canopy Microhabitats.

    Science.gov (United States)

    Fotis, A. T.

    2014-12-01

    The theory that forests become carbon (C) neutral with maturity has recently been challenged. While a growing body of evidence shows that net C accumulation continues in forests that are centuries old, the reasons remain poorly known. Increasing canopy structural complexity, quantified by high variability in leaf distribution, has been proposed as a mechanism for sustained rates of C assimilation in mature forests. The goal of our research was to expand on these findings and explore a new idea of spatio-temporal canopy structural complexity as a mechanism linking canopy structure to function (C assimilation).Our work takes place at the UMBS AmeriFlux core facility (US-UMB) in northern Michigan, USA. Canopy structure was quantified over 6 seasons with portable canopy LiDAR (PCL) and canopy spatial microhabitat variability was studied using hemispherical photographs from different heights within the canopy. We found a more even distribution of irradiance in more structurally complex canopies within a single year, and furthermore, that between-year variability of spatial leaf arrangement decreased with increasing canopy complexity. We suggest that in complex canopies less redistribution of leaf material over time may lead to more similar light microhabitats within and among years. Conversely, in less complex canopies this relationship can lead to a year-to-year time lag in morphological leaf acclimation since the effects of the previous-year's light environment are reflected in the morphological characteristics of current-year leaves.Our study harnesses unique spatio-temporal resolution measurements of canopy structure and microhabitat that can inform better management strategies seeking to maximize forest C uptake. Future research quantifying the relationship between canopy structure and light distribution will improve performance of ecosystem models that currently lack spatially explicit canopy structure information.

  6. Identifying throughfall flowpaths in the forest canopy

    Science.gov (United States)

    Keim, Richard; Link, Timothy

    2016-04-01

    As precipitation moves through the canopy, it is routed via a number of flowpaths to the soil that give rise to spatial variability of infiltration. The temporary detention of water in canopies that smooths intensity of throughfall delivered to the forest floor also entails flow along canopy surfaces to cause spatial redistribution. However, details of linkages between these two phenomena remain unclear, preventing development of a general conceptual model for how water is routed through forest canopies. We investigated the relationship between point throughfall amount and intensity smoothing using 25 tipping bucket rain gauges both under and above a coniferous forest canopy in 11 storms. Overall, hydraulic residence time in the canopy was negatively correlated with storm-total throughfall amount, i.e., locations with more throughfall generally had intensity fluctuations more like rainfall. This effect was greatest in storms with higher intensity and higher ratio of evaporation to intensity, and was not related to wind speed. Thus, at least in this forest, it appears that both evaporation and high intensity can enhance concentration of throughfall into preferential flowpaths through the canopy, by the opposing mechanisms of either retarding or enhancing flowpath development, respectively.

  7. VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine

    Directory of Open Access Journals (Sweden)

    Roberta De Bei

    2016-04-01

    Full Text Available Leaf area index (LAI and plant area index (PAI are common and important biophysical parameters used to estimate agronomical variables such as canopy growth, light interception and water requirements of plants and trees. LAI can be either measured directly using destructive methods or indirectly using dedicated and expensive instrumentation, both of which require a high level of know-how to operate equipment, handle data and interpret results. Recently, a novel smartphone and tablet PC application, VitiCanopy, has been developed by a group of researchers from the University of Adelaide and the University of Melbourne, to estimate grapevine canopy size (LAI and PAI, canopy porosity, canopy cover and clumping index. VitiCanopy uses the front in-built camera and GPS capabilities of smartphones and tablet PCs to automatically implement image analysis algorithms on upward-looking digital images of canopies and calculates relevant canopy architecture parameters. Results from the use of VitiCanopy on grapevines correlated well with traditional methods to measure/estimate LAI and PAI. Like other indirect methods, VitiCanopy does not distinguish between leaf and non-leaf material but it was demonstrated that the non-leaf material could be extracted from the results, if needed, to increase accuracy. VitiCanopy is an accurate, user-friendly and free alternative to current techniques used by scientists and viticultural practitioners to assess the dynamics of LAI, PAI and canopy architecture in vineyards, and has the potential to be adapted for use on other plants.

  8. VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine.

    Science.gov (United States)

    De Bei, Roberta; Fuentes, Sigfredo; Gilliham, Matthew; Tyerman, Steve; Edwards, Everard; Bianchini, Nicolò; Smith, Jason; Collins, Cassandra

    2016-01-01

    Leaf area index (LAI) and plant area index (PAI) are common and important biophysical parameters used to estimate agronomical variables such as canopy growth, light interception and water requirements of plants and trees. LAI can be either measured directly using destructive methods or indirectly using dedicated and expensive instrumentation, both of which require a high level of know-how to operate equipment, handle data and interpret results. Recently, a novel smartphone and tablet PC application, VitiCanopy, has been developed by a group of researchers from the University of Adelaide and the University of Melbourne, to estimate grapevine canopy size (LAI and PAI), canopy porosity, canopy cover and clumping index. VitiCanopy uses the front in-built camera and GPS capabilities of smartphones and tablet PCs to automatically implement image analysis algorithms on upward-looking digital images of canopies and calculates relevant canopy architecture parameters. Results from the use of VitiCanopy on grapevines correlated well with traditional methods to measure/estimate LAI and PAI. Like other indirect methods, VitiCanopy does not distinguish between leaf and non-leaf material but it was demonstrated that the non-leaf material could be extracted from the results, if needed, to increase accuracy. VitiCanopy is an accurate, user-friendly and free alternative to current techniques used by scientists and viticultural practitioners to assess the dynamics of LAI, PAI and canopy architecture in vineyards, and has the potential to be adapted for use on other plants. PMID:27120600

  9. Is methane released from the forest canopy?

    DEFF Research Database (Denmark)

    Mikkelsen, T.N.; Bruhn, D.; Ambus, P.;

    2011-01-01

    Laboratory experiments show that rates of CH(4) emission from plant material depend exponentially on temperature and linearly on UV irradiance. The UV irradiance shall be spectrally weighted and shorter wavelengths results in higher CH(4) emissions. Global upscaling models for estimating aerobic CH......) analyzer to a canopy air profile system that samples air below and above the canopy from seven different heights. A profile system with many vertical sample points can detect gas concentration gradients with a high sensitivity only under conditions with no or little air movements. Under these conditions we...... found indications of periodic CH(4) emissions in the canopy, but more data need to be analyzed before the magnitude of the canopy source of CH(4) can be established...

  10. Is methane released from the forest canopy?

    DEFF Research Database (Denmark)

    Mikkelsen, Teis Nørgaard; Bruhn, Dan; Ambus, Per;

    2011-01-01

    Laboratory experiments show that rates of CH4 emission from plant material depend exponentially on temperature and linearly on UV irradiance. The UV irradiance shall be spectrally weighted and shorter wavelengths results in higher CH4 emissions. Global upscaling models for estimating aerobic CH4...... to a canopy air profile system that samples air below and above the canopy from seven different heights. A profile system with many vertical sample points can detect gas concentration gradients with a high sensitivity only under conditions with no or little air movements. Under these conditions we found...... indications of periodic CH4 emissions in the canopy, but more data need to be analyzed before the magnitude of the canopy source of CH4 can be established....

  11. US Forest Service LANDFIRE Canopy Fuel

    Data.gov (United States)

    US Forest Service, Department of Agriculture — LANDFIRE canopy fuel data describe the composition and characteristics of wildland surface fuel and can be implemented within models to predict wildland fire...

  12. Bone Canopies in Pediatric Renal Osteodystrophy

    DEFF Research Database (Denmark)

    Pereira, Renata C; Levin Andersen, Thomas; Friedman, Peter A;

    2016-01-01

    and their association with biochemical and bone histomorphometric parameters in 106 pediatric chronic kidney disease (CKD) patients (stage 2-5) across the spectrum of ROD. Canopies in CKD patients often appeared as thickened multilayered canopies, similar to previous reports in patients with primary hyperparathyroidism....... This finding contrasts with the thin appearance reported in healthy individuals with normal kidney function. Furthermore, canopies in pediatric CKD patients showed immunoreactivity to the PTH receptor (PTHR1) as well as to the receptor activator of nuclear factor kappa-B ligand (RANKL). The number of surfaces......Pediatric renal osteodystrophy (ROD) is characterized by changes in bone turnover, mineralization, and volume that are brought about by alterations in bone resorption and formation. The resorptive and formative surfaces on the cancellous bone are separated from the marrow cavity by canopies...

  13. Interactions between Fragmented Seagrass Canopies and the Local Hydrodynamics.

    Science.gov (United States)

    El Allaoui, Nazha; Serra, Teresa; Colomer, Jordi; Soler, Marianna; Casamitjana, Xavier; Oldham, Carolyn

    2016-01-01

    The systematic creation of gaps within canopies results in fragmentation and the architecture of fragmented canopies differs substantially from non-fragmented canopies. Canopy fragmentation leads to spatial heterogeneity in hydrodynamics and therefore heterogeneity in the sheltering of canopy communities. Identifying the level of instability due to canopy fragmentation is important for canopies in coastal areas impacted by human activities and indeed, climate change. The gap orientation relative to the wave direction is expected to play an important role in determining wave attenuation and sheltering. Initially we investigated the effect of a single transversal gap within a canopy (i.e. a gap oriented perpendicular to the wave direction) on hydrodynamics, which was compared to fully vegetated canopies (i.e. no gaps) and also to bare sediment. The wave velocity increased with gap width for the two canopy densities studied (2.5% and 10% solid plant fraction) reaching wave velocities found over bare sediments. The turbulent kinetic energy (TKE) within the gap also increased, but was more attenuated by the adjacent vegetation than the wave velocity. As expected, denser canopies produced a greater attenuation of both the wave velocity and the turbulent kinetic energy within an adjacent gap, compared to sparse canopies. Using non-dimensional analysis and our experimental data, a parameterization for predicting TKE in a canopy gap was formulated, as a function of easily measured variables. Based on the experimental results, a fragmented canopy model was then developed to determine the overall mixing level in such canopies. The model revealed that canopies with large gaps present more mixing than canopies with small gaps despite having the same total gap area in the canopy. Furthermore, for the same total gap area, dense fragmented canopies provide more shelter than sparse fragmented canopies. PMID:27227321

  14. Dynamics of vertical leaf nitrogen distribution in a vegetative wheat canopy Impact on canopy photosynthesis

    NARCIS (Netherlands)

    Dreccer, M.F.; Oijen, van M.; Schapendonk, A.H.C.M.; Pot, C.S.; Rabbinge, R.

    2000-01-01

    The development of vertical canopy gradients of leaf N has been regarded as an adaptation to the light gradient that helps to maximize canopy photosynthesis. In this study we report the dynamics of vertical leaf N distribution during vegetative growth of wheat in response to changes in N availabilit

  15. Remote sensing of sagebrush canopy nitrogen

    Science.gov (United States)

    Mitchell, Jessica J.; Glenn, Nancy F.; Sankey, Temuulen T.; Derryberry, DeWayne R.; Germino, Matthew J.

    2012-01-01

    This paper presents a combination of techniques suitable for remotely sensing foliar Nitrogen (N) in semiarid shrublands – a capability that would significantly improve our limited understanding of vegetation functionality in dryland ecosystems. The ability to estimate foliar N distributions across arid and semi-arid environments could help answer process-driven questions related to topics such as controls on canopy photosynthesis, the influence of N on carbon cycling behavior, nutrient pulse dynamics, and post-fire recovery. Our study determined that further exploration into estimating sagebrush canopy N concentrations from an airborne platform is warranted, despite remote sensing challenges inherent to open canopy systems. Hyperspectral data transformed using standard derivative analysis were capable of quantifying sagebrush canopy N concentrations using partial least squares (PLS) regression with an R2 value of 0.72 and an R2 predicted value of 0.42 (n = 35). Subsetting the dataset to minimize the influence of bare ground (n = 19) increased R2 to 0.95 (R2 predicted = 0.56). Ground-based estimates of canopy N using leaf mass per unit area measurements (LMA) yielded consistently better model fits than ground-based estimates of canopy N using cover and height measurements. The LMA approach is likely a method that could be extended to other semiarid shrublands. Overall, the results of this study are encouraging for future landscape scale N estimates and represent an important step in addressing the confounding influence of bare ground, which we found to be a major influence on predictions of sagebrush canopy N from an airborne platform.

  16. Surface-atmosphere interactions with coupled within-canopy aerodynamic resistance and canopy reflection.

    Science.gov (United States)

    Timmermans, J.; van der Tol, C.; Verhoef, W.; Su, Z.

    2009-04-01

    Models that describe the exchange of CO2 and H2O between the surface and atmosphere use bulk-parametrization of the within-canopy aerodynamic resistance and leaf area density (eq. LAI). This bulk parametrization is based on the Monin-Obukhov Similarity (MOS) theory. The MOS theory however breaks down for sparse canopies and it cannot couple profiles in the leaf density to profiles in the within-canopy aerodynamic resistance. The objective of this research is to create a simple model that is able to couple the within-canopy aerodynamic resistance and canopy reflection for different levels in the canopy. This model should be able to represent the canopy using as fewer parameters as possible, in order to facilitate inversion of remote sensing imagery. A virtual canopy was simulated using an L-systems approach, Lindenmayer 1968. The L-system approach was chosen because it describes the canopy with fractals. It therefore needs very little inputs to simulate a virtual canopy. A vertical profile of leaf density was calculated for 60 levels from this virtual canopy. The within-canopy aerodynamic resistance was modeled from the vertical leaf density profile using foliage drag coefficient, Massman 1997. A modified version of the SCOPE (Soil Canopy Observations and Photosynthesis) model was used to calculate the H2O and CO2 fluxes using the vertical profiles of leaf density and within-canopy aerodynamic resistance. The simulated fluxes are compared with field measurements over a vineyard and a forested area. The field measurements in both areas are acquired using the same setup: a basic flux tower in addition with an eddy-covariance setup. We present in this article the methodology and the results, as a proof of concept. references Massman, W.J., An Analytical One-Dimensional Model of Momentum Transfer by vegetation of arbitrary structure, Boundary-Layer Meteorology, 1997, 83, 407-421 Lindenmayer, A., Mathematical Models for Cellular Interactions in Development, Journal of

  17. Longitudinal dispersion in open channel flow with suspended canopies.

    Science.gov (United States)

    Huai, Wenxin; Li, Chengguang

    2016-01-01

    Suspended canopies can cause flow disturbances such as reducing velocities within the canopy, and increasing flow beneath the canopy. Flow modifications by canopies dramatically affect the fate and transport of sediment, nutrients, contaminants, dissolved oxygen, and fauna in aquatic systems. A three-zone model is presented here to predict the longitudinal dispersion coefficient by simplifying Chikwendu's N-zone model. To validate the model, both flow field and tracer experiments were conducted using a straight rectangular Plexiglas flume, with rigid circular rods as the modeled suspended canopies. The result shows that velocities increased above the flume bed and maximized at a point between the canopies and flume bed. Above that point, streamwise velocities decreased into and within the canopies. Reynolds shear stresses were largest at the canopy interface and smallest (zero) at the velocity maximum point. Good agreement between the modeled results and experimental data shows that the model can effectively predict the longitudinal dispersion coefficient in open channels with suspended canopies.

  18. Modelling Canopy Flows over Complex Terrain

    Science.gov (United States)

    Grant, Eleanor R.; Ross, Andrew N.; Gardiner, Barry A.

    2016-06-01

    Recent studies of flow over forested hills have been motivated by a number of important applications including understanding CO_2 and other gaseous fluxes over forests in complex terrain, predicting wind damage to trees, and modelling wind energy potential at forested sites. Current modelling studies have focussed almost exclusively on highly idealized, and usually fully forested, hills. Here, we present model results for a site on the Isle of Arran, Scotland with complex terrain and heterogeneous forest canopy. The model uses an explicit representation of the canopy and a 1.5-order turbulence closure for flow within and above the canopy. The validity of the closure scheme is assessed using turbulence data from a field experiment before comparing predictions of the full model with field observations. For near-neutral stability, the results compare well with the observations, showing that such a relatively simple canopy model can accurately reproduce the flow patterns observed over complex terrain and realistic, variable forest cover, while at the same time remaining computationally feasible for real case studies. The model allows closer examination of the flow separation observed over complex forested terrain. Comparisons with model simulations using a roughness length parametrization show significant differences, particularly with respect to flow separation, highlighting the need to explicitly model the forest canopy if detailed predictions of near-surface flow around forests are required.

  19. BOREAS TE-9 NSA Canopy Biochemistry

    Science.gov (United States)

    Hall, Forrest G. (Editor); Curd, Shelaine (Editor); Margolis, Hank; Charest, Martin; Sy, Mikailou

    2000-01-01

    The BOREAS TE-9 team collected several data sets related to chemical and photosynthetic properties of leaves. This data set contains canopy biochemistry data collected in 1994 in the NSA at the YJP, OJR, OBS, UBS, and OA sites, including biochemistry lignin, nitrogen, cellulose, starch, and fiber concentrations. These data were collected to study the spatial and temporal changes in the canopy biochemistry of boreal forest cover types and how a high-resolution radiative transfer model in the mid-infrared could be applied in an effort to obtain better estimates of canopy biochemical properties using remote sensing. The data are available in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  20. Testing models of tree canopy structure

    Energy Technology Data Exchange (ETDEWEB)

    Martens, S.N. (Los Alamos National Laboratory, NM (United States))

    1994-06-01

    Models of tree canopy structure are difficult to test because of a lack of data which are suitability detailed. Previously, I have made three-dimensional reconstructions of individual trees from measured data. These reconstructions have been used to test assumptions about the dispersion of canopy elements in two- and three-dimensional space. Lacunarity analysis has also been used to describe the texture of the reconstructed canopies. Further tests regarding models of the nature of tree branching structures have been made. Results using probability distribution functions for branching measured from real trees show that branching in Juglans is not Markovian. Specific constraints or rules are necessary to achieve simulations of branching structure which are faithful to the originally measured trees.

  1. Modelling the canopy development of bambara groundnut

    DEFF Research Database (Denmark)

    Karunaratne, A.S.; Azam-Ali, S.N.; Al-Shareef, I.;

    2010-01-01

    Canopy development of bambara groundnut (Vigna subterranea (L.) Verdc) is affected by temperature stress, drought stress and photoperiod. The quantification of these documented effects by means of a suitable crop model, BAMGRO is presented in this paper. Data on canopy development from five growth...... chamber, four glasshouse and three field experiments were analyzed to calibrate and validate the BAMGRO model to produce simulations for temperature stress, drought stress and photoperiodic effect on two contrasting landraces; Uniswa Red (Swaziland) and S19-3 (Namibia). The daily initiation rate of new...... and drought stress. The leaf area expansion is calculated as a function of leaf number and individual leaf size. The canopy development of bambara groundnut is modelled (and tested) in BAMGRO model by means of leaf initiation and leaf area expansion and branching and stem production are not considered. Nash...

  2. West Coast Canopy-Forming Kelp, 1989-2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data include the general extents of canopy-forming kelp surveys from 1989 to 2014 and a compilation of existing data sets delineating canopy-forming kelp beds...

  3. 100-Meter Resolution Tree Canopy of Alaska - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Alaska, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  4. 100-Meter Resolution Tree Canopy of Hawaii - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Hawaii, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  5. Wireless sensor networks for canopy temperature sensing and irrigation management

    Science.gov (United States)

    For researchers, canopy temperature measurements have proven useful in characterizing crop water stress and developing protocols for irrigation management. Today, there is heightened interest in using remote canopy temperature measurements for real-time irrigation scheduling. However, without the us...

  6. LASER ALTIMETER CANOPY HEIGHT PROFILES: METHODS AND VALIDATION FOR CLOSED-CANOPY, BROADLEAF FORESTS. (R828309)

    Science.gov (United States)

    AbstractWaveform-recording laser altimeter observations of vegetated landscapes provide a time-resolved measure of laser pulse backscatter energy from canopy surfaces and the underlying ground. Airborne laser altimeter waveform data was acquired using the Scanning Lid...

  7. Canopy dynamics of a tropical rain forest in French Guiana.

    NARCIS (Netherlands)

    Meer, van der P.J.

    1995-01-01

    The canopy dynamics (i.e. the formation and closure of canopy gaps) of a tropical rain forest in French Guiana are described. The formation of canopy gaps is investigated. The difficulties with gap size measurements are studied, and causes and consequences of treefalls and branchfalls are examined.

  8. Scaling leaf measurements to estimate cotton canopy gas exchange

    Science.gov (United States)

    Diurnal leaf and canopy gas exchange of well watered field grown cotton were measured. Leaf measurements were made with a portable photosynthesis system and canopy measurements with open Canopy Evapo-Transpiration and Assimilation (CETA) systems. Leaf level measurements were arithmetically scaled to...

  9. [Estimation of canopy chlorophyll content using hyperspectral data].

    Science.gov (United States)

    Dong, Jing-Jing; Wang, Li; Niu, Zheng

    2009-11-01

    Many researches have developed models to estimate chlorophyl content at leaf and canopy level, but they were species-specific. The objective of the present paper was to develop a new model. First, canopy reflectance was simulated for different species and different canopy architecture using radiative transfer models. Based on the simulated canopy reflectance, the relationship between canopy reflectance and canopy chlorophyll content was studied, and then a chlorophyll estimation model was built using the method of spectral index. The coefficient of determination (R2) between spectral index based model and canopy chlorophyll content reached 0.75 for simulated data. To investigate the applicability of this chlorophyll model, the authors chose a field sample area in Gansu Province to carry out the measurement of leaf chlorophyll content, canopy reflectance and other parameters. Besides, the authors also ordered the synchronous Hyperion data, a hyperspectral image with a spatial resolution of 30 m. Canopy reflectance from field measurment and reflectance from Hyperion image were respectively used as the input parameter for the chlorophyll estimation model. Both of them got good results, which indicated that the model could be used for accurate canopy chlorophyll estimation using canopy reflectance. However, while using spaceborne hyperspectral data to estimate canopy chlorophyll content, good atmospheric correction is required. PMID:20101973

  10. Seagrass canopy photosynthetic response is a function of canopy density and light environment: a model for Amphibolis griffithii.

    Directory of Open Access Journals (Sweden)

    John D Hedley

    Full Text Available A three-dimensional computer model of canopies of the seagrass Amphibolis griffithii was used to investigate the consequences of variations in canopy structure and benthic light environment on leaf-level photosynthetic saturation state. The model was constructed using empirical data of plant morphometrics from a previously conducted shading experiment and validated well to in-situ data on light attenuation in canopies of different densities. Using published values of the leaf-level saturating irradiance for photosynthesis, results show that the interaction of canopy density and canopy-scale photosynthetic response is complex and non-linear, due to the combination of self-shading and the non-linearity of photosynthesis versus irradiance (P-I curves near saturating irradiance. Therefore studies of light limitation in seagrasses should consider variation in canopy structure and density. Based on empirical work, we propose a number of possible measures for canopy scale photosynthetic response that can be plotted to yield isoclines in the space of canopy density and light environment. These plots can be used to interpret the significance of canopy changes induced as a response to decreases in the benthic light environment: in some cases canopy thinning can lead to an equivalent leaf level light environment, in others physiological changes may also be required but these alone may be inadequate for canopy survival. By providing insight to these processes the methods developed here could be a valuable management tool for seagrass conservation during dredging or other coastal developments.

  11. Modeling of forest canopy BRDF using DIRSIG

    Science.gov (United States)

    Rengarajan, Rajagopalan; Schott, John R.

    2016-05-01

    The characterization and temporal analysis of multispectral and hyperspectral data to extract the biophysical information of the Earth's surface can be significantly improved by understanding its aniosotropic reflectance properties, which are best described by a Bi-directional Reflectance Distribution Function (BRDF). The advancements in the field of remote sensing techniques and instrumentation have made hyperspectral BRDF measurements in the field possible using sophisticated goniometers. However, natural surfaces such as forest canopies impose limitations on both the data collection techniques, as well as, the range of illumination angles that can be collected from the field. These limitations can be mitigated by measuring BRDF in a virtual environment. This paper presents an approach to model the spectral BRDF of a forest canopy using the Digital Image and Remote Sensing Image Generation (DIRSIG) model. A synthetic forest canopy scene is constructed by modeling the 3D geometries of different tree species using OnyxTree software. The field collected spectra from the Harvard forest is used to represent the optical properties of the tree elements. The canopy radiative transfer is estimated using the DIRSIG model for specific view and illumination angles to generate BRDF measurements. A full hemispherical BRDF is generated by fitting the measured BRDF to a semi-empirical BRDF model. The results from fitting the model to the measurement indicates a root mean square error of less than 5% (2 reflectance units) relative to the forest's reflectance in the VIS-NIR-SWIR region. The process can be easily extended to generate a spectral BRDF library for various biomes.

  12. Discriminating crop and other canopies by overlapping binary image layers

    Science.gov (United States)

    Doi, Ryoichi

    2013-02-01

    For optimal management of agricultural fields by remote sensing, discrimination of the crop canopy from weeds and other objects is essential. In a digital photograph, a rice canopy was discriminated from a variety of weed and tree canopies and other objects by overlapping binary image layers of red-green-blue and other color components indicating the pixels with target canopy-specific (intensity) values based on the ranges of means ±(3×) standard deviations. By overlapping and merging the binary image layers, the target canopy specificity improved to 0.0015 from 0.027 for the yellow 1× standard deviation binary image layer, which was the best among all combinations of color components and means ±(3×) standard deviations. The most target rice canopy-likely pixels were further identified by limiting the pixels at different luminosity values. The discriminatory power was also visually demonstrated in this manner.

  13. Summertime canopy albedo is sensitive to forest thinning

    OpenAIRE

    Otto, J.; Berveiller, D.; F.-M. Bréon; Delpierre, N.; Geppert, G.; Granier, A.; Jans, W.; Knohl, A; Kuusk, A.; B. Longdoz; Moors, E.; Mund, M.; Pinty, B.; M.-J. Schelhaas; Luyssaert, S.

    2013-01-01

    Despite an emerging body of literature linking canopy albedo to forest management, understanding of the process is still fragmented. We combined a stand-level forest gap model with a canopy radiation transfer model and satellite-derived model parameters to quantify the effects of forest thinning, that is removing trees at a certain time during the forest rotation, on summertime canopy albedo. The effects of different forest species (pine, beech, oak) and four thinning strategies (light to int...

  14. Canopy radiation transmission for an energy balance snowmelt model

    Science.gov (United States)

    Mahat, Vinod; Tarboton, David G.

    2012-01-01

    To better estimate the radiation energy within and beneath the forest canopy for energy balance snowmelt models, a two stream radiation transfer model that explicitly accounts for canopy scattering, absorption and reflection was developed. Upward and downward radiation streams represented by two differential equations using a single path assumption were solved analytically to approximate the radiation transmitted through or reflected by the canopy with multiple scattering. This approximation results in an exponential decrease of radiation intensity with canopy depth, similar to Beer's law for a deep canopy. The solution for a finite canopy is obtained by applying recursive superposition of this two stream single path deep canopy solution. This solution enhances capability for modeling energy balance processes of the snowpack in forested environments, which is important when quantifying the sensitivity of hydrologic response to input changes using physically based modeling. The radiation model was included in a distributed energy balance snowmelt model and results compared with observations made in three different vegetation classes (open, coniferous forest, deciduous forest) at a forest study area in the Rocky Mountains in Utah, USA. The model was able to capture the sensitivity of beneath canopy net radiation and snowmelt to vegetation class consistent with observations and achieve satisfactory predictions of snowmelt from forested areas from parsimonious practically available information. The model is simple enough to be applied in a spatially distributed way, but still relatively rigorously and explicitly represent variability in canopy properties in the simulation of snowmelt over a watershed.

  15. Mercury in canopy leaves of French Guiana in remote areas.

    Science.gov (United States)

    Mélières, Marie-Antoinette; Pourchet, M; Charles-Dominique, P; Gaucher, P

    2003-07-20

    A study of total Hg concentration in the foliage of the canopy was carried out in two remote areas in French Guiana. The sampled canopy is representative of the French Guiana canopy. The concentration in the foliage, 64+/-14 ngg(-1) (dry wt.), is used to estimate the annual input of total Hg to the soil through the litterfall, found to be 45+/-10 microgm(-2)y(-1). As translocation is negligible, mercury in the canopy originates mainly from atmospheric uptake by the leaves and this litterfall deposit represents a direct atmospheric input from the background atmospheric load into the soil. PMID:12826397

  16. Polynomial analysis of canopy spectra and biochemical component content inversion

    Institute of Scientific and Technical Information of China (English)

    YAN Chunyan; LIU Qiang; NIU Zheng; WANG Jihua; HUANG Wenjiang; LIU Liangyun

    2005-01-01

    A polynomial expression model was developed in this paper to describe directional canopy spectra, and the decomposition of the polynomial expression was used as a tool for retrieving biochemical component content from canopy multi-angle spectra. First, the basic formula of the polynomial expression was introduced and the physical meaning of its terms and coefficients was discussed. Based on this analysis, a complete polynomial expression model and its decomposition method were given. By decomposing the canopy spectra simulated with SAILH model, it shows that the polynomial expression can not only fit well the canopy spectra, but also show the contribution of every order scattering to the whole reflectance. Taking the first scattering coefficients a10 and a01 for example, the test results show that the polynomial coefficients reflect very well the hot spot phenomenon and the effects of viewing angles, LAI and leaf inclination angle on canopy spectra. By coupling the polynomial expression with leaf model PROSPECT, a canopy biochemical component content inversion model was given. In the simulated test, the canopy multi-angle spectra were simulated by two different models, SAILH and 4-SCALE respectively, then the biochemical component content was retrieved by inverting the coupled polynomial expression + PROSPECT model. Results of the simulated test are promising, and when applying the algorithm to measured corn canopy multi-angle spectra, we also get relatively accurate chlorophyll content. It shows that the polynomial analysis provides a new method to get biochemical component content independent of any specific canopy model.

  17. Evaporation from rain-wetted forest in relation to canopy wetness, canopy cover, and net radiation

    NARCIS (Netherlands)

    Klaassen, W.

    2001-01-01

    Evaporation from wet canopies is commonly calculated using E-PM, the Penman-Monteith equation with zero surface resistance. However, several observations show a lower evaporation from rain-wetted forest. Possible causes for the difference between E-PM and experiments are evaluated to provide rules f

  18. Subtropical Modern Greenhouse Cucumber Canopy Transpiration Under Summer Climate Condition

    Institute of Scientific and Technical Information of China (English)

    LUO Wei-hong; WANG Xiao-han; DING Wei-min; CHEN Yu-qing; DAI Jian-feng

    2002-01-01

    Greenhouse canopy transpiration not only has effects on greenhouse air temperature and humidity, but also is important for determining the set-point of fertigation. In this study, Penman-Monteith equation was used to calculate the greenhouse cucumber canopy transpiration under summer climate condition.The effects of greenhouse environmental factors on canopy transpiration were analyzed based on the measurements of greenhouse microclimate factors and canopy transpiration. The results showed that Penman-Monteith equation was reliable and robust in estimating greenhouse cucumber canopy transpiration under summer climate condition. Greenhouse cucumber canopy transpiration rate increased linearly with the increase of net radiation and water vapor pressure deficit (VPD) above the canopy. But the maximum value of the canopy transpiration rate occurred at the same time as that of VPD whereas about two hours later than that of net radiation. Based on the results, it was concluded that in addition to radiation, air humidity should also be considered when determine the set-point of fertigation.

  19. Hierarchical Canopy Dynamics of Electrolyte-Doped Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2013-12-23

    Nanoscale ionic materials (NIMs) are organic-inorganic hybrids prepared from ionically functionalized nanoparticles (NP) neutralized by oligomeric polymer counterions. NIMs are designed to behave as liquids under ambient conditions in the absence of solvent and have no volatile organic content, making them useful for a number of applications. We have used nuclear magnetic resonance relaxation and pulsed-field gradient NMR to probe local and collective canopy dynamics in NIMs based on 18-nm silica NPs with a covalently bound anionic corona, neutralized by amine-terminated ethylene oxide/propylene oxide block copolymers. The NMR relaxation studies show that the nanosecond-scale canopy dynamics depend on the degree of neutralization, the canopy radius of gyration, and crowding at the ionically modified NP surface. Two canopy populations are observed in the diffusion experiments, demonstrating that one fraction of the canopy is bound to the NP surface on the time scale (milliseconds) of the diffusion experiment and is surrounded by a more mobile layer of canopy that is unable to access the surface due to molecular crowding. The introduction of electrolyte ions (Na+ or Mg2+) screens the canopy-corona electrostatic interactions, resulting in a reduced bulk viscosity and faster canopy exchange. The magnitude of the screening effect depends upon ion concentration and valence, providing a simple route for tuning the macroscopic properties of NIMs. © 2013 American Chemical Society.

  20. Summertime canopy albedo is sensitive to forest thinning

    NARCIS (Netherlands)

    Otto, J.; Berveiller, D.; Bréon, F.M.; Delpierre, N.; Geppert, G.; Granier, A.; Jans, W.W.P.; Knohl, A.; Moors, E.J.

    2013-01-01

    Despite an emerging body of literature linking canopy albedo to forest management, understanding of the process is still fragmented. We combined a stand-level forest gap model with a canopy radiation transfer model and satellite-derived model parameters to quantify the effects of forest thinning, th

  1. Optimality of nitrogen distribution among leaves in plant canopies.

    Science.gov (United States)

    Hikosaka, Kouki

    2016-05-01

    The vertical gradient of the leaf nitrogen content in a plant canopy is one of the determinants of vegetation productivity. The ecological significance of the nitrogen distribution in plant canopies has been discussed in relation to its optimality; nitrogen distribution in actual plant canopies is close to but always less steep than the optimal distribution that maximizes canopy photosynthesis. In this paper, I review the optimality of nitrogen distribution within canopies focusing on recent advancements. Although the optimal nitrogen distribution has been believed to be proportional to the light gradient in the canopy, this rule holds only when diffuse light is considered; the optimal distribution is steeper when the direct light is considered. A recent meta-analysis has shown that the nitrogen gradient is similar between herbaceous and tree canopies when it is expressed as the function of the light gradient. Various hypotheses have been proposed to explain why nitrogen distribution is suboptimal. However, hypotheses explain patterns observed in some specific stands but not in others; there seems to be no general hypothesis that can explain the nitrogen distributions under different conditions. Therefore, how the nitrogen distribution in canopies is determined remains open for future studies; its understanding should contribute to the correct prediction and improvement of plant productivity under changing environments. PMID:27059755

  2. Measuring canopy structure with an airborne laser altimeter

    International Nuclear Information System (INIS)

    Quantification of vegetation patterns and properties is needed to determine their role on the landscape and to develop management plans to conserve our natural resources. Quantifying vegetation patterns from the ground, or by using aerial photography or satellite imagery is difficult, time consuming, and often expensive. Digital data from an airborne laser altimeter offer an alternative method to quantify selected vegetation properties and patterns of forest and range vegetation. Airborne laser data found canopy heights varied from 2 to 6 m within even-aged pine forests. Maximum canopy heights measured with the laser altimeter were significantly correlated to measurements made with ground-based methods. Canopy shape could be used to distinguish deciduous and evergreen trees. In rangeland areas, vegetation heights, spatial patterns, and canopy cover measured with the laser altimeter were significantly related with field measurements. These studies demonstrate the potential of airborne laser data to measure canopy structure and properties for large areas quickly and quantitatively

  3. Turbulence in vertical axis wind turbine canopies

    Science.gov (United States)

    Kinzel, Matthias; Araya, Daniel B.; Dabiri, John O.

    2015-11-01

    Experimental results from three different full scale arrays of vertical-axis wind turbines (VAWTs) under natural wind conditions are presented. The wind velocities throughout the turbine arrays are measured using a portable meteorological tower with seven, vertically staggered, three-component ultrasonic anemometers. The power output of each turbine is recorded simultaneously. The comparison between the horizontal and vertical energy transport for the different turbine array sizes shows the importance of vertical transport for large array configurations. Quadrant-hole analysis is employed to gain a better understanding of the vertical energy transport at the top of the VAWT arrays. The results show a striking similarity between the flows in the VAWT arrays and the adjustment region of canopies. Namely, an increase in ejections and sweeps and decrease in inward and outward interactions occur inside the turbine array. Ejections are the strongest contributor, which is in agreement with the literature on evolving and sparse canopy flows. The influence of the turbine array size on the power output of the downstream turbines is examined by comparing a streamwise row of four single turbines with square arrays of nine turbine pairs. The results suggest that a new boundary layer forms on top of the larger turbine arrays as the flow adjusts to the new roughness length. This increases the turbulent energy transport over the whole planform area of the turbine array. By contrast, for the four single turbines, the vertical energy transport due to turbulent fluctuations is only increased in the near wake of the turbines. These findings add to the knowledge of energy transport in turbine arrays and therefore the optimization of the turbine spacing in wind farms.

  4. CFD modelling and wind tunnel validation of airflow through plant canopies using 3D canopy architecture

    International Nuclear Information System (INIS)

    The efficiency of pesticide application to agricultural fields and the resulting environmental contamination highly depend on atmospheric airflow. A computational fluid dynamics (CFD) modelling of airflow within plant canopies using 3D canopy architecture was developed to understand the effect of the canopy to airflow. The model average air velocity was validated using experimental results in a wind tunnel with two artificial model trees of 24 cm height. Mean air velocities and their root mean square (RMS) values were measured on a vertical plane upstream and downstream sides of the trees in the tunnel using 2D hotwire anemometer after imposing a uniform air velocity of 10 m s-1 at the inlet. 3D virtual canopy geometries of the artificial trees were modelled and introduced into a computational fluid domain whereby airflow through the trees was simulated using Reynolds-Averaged Navier-Stokes (RANS) equations and k-ε turbulence model. There was good agreement of the average longitudinal velocity, U between the measurements and the simulation results with relative errors less than 2% for upstream and 8% for downstream sides of the trees. The accuracy of the model prediction for turbulence kinetic energy k and turbulence intensity I was acceptable within the tree height when using a roughness length (y0 = 0.02 mm) for the surface roughness of the tree branches and by applying a source model in a porous sub-domain created around the trees. The approach was applied for full scale orchard trees in the atmospheric boundary layer (ABL) and was compared with previous approaches and works. The simulation in the ABL was made using two groups of full scale orchard trees; short (h = 3 m) with wider branching and long (h = 4 m) with narrow branching. This comparison showed good qualitative agreements on the vertical profiles of U with small local differences as expected due to the spatial disparities in tree architecture. This work was able to show airflow within and above the

  5. Forest Canopy Height Estimation from Calipso Lidar Measurement

    Science.gov (United States)

    Lu, Xiaomei; Hu, Yongxiang; Lucker, Patricia L.; Trepte, Charles

    2016-06-01

    The canopy height is an important parameter in aboveground biomass estimation. Lidar remote sensing from airborne or satellite platforms, has a unique capability for forestry applications. This study introduces an innovative concept to estimate canopy height using CALIOP two wavelengths lidar measurements. One main advantage is that the concept proposed here is dependent on the penetration depths at two wavelengths without making assumption about the last peak of waveform as the ground location, and it does not require the ancillary Digital Elevation Model (DEM) data in order to obtain the slope information of terrain. Canopy penetration depths at two wavelengths indicate moderately strong relationships for estimating the canopy height. Results show that the CALIOP-derived canopy heights were highly correlated with the ICESat/GLAS-derived values with a mean RMSE of 3.4 m and correlation coefficient (R) of 0.89. Our findings present a relationship between the penetration difference and canopy height, which can be used as another metrics for canopy height estimation, except the full waveforms.

  6. A Generalized Layered Radiative Transfer Model in the Vegetation Canopy

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    In this paper, a generalized layered model for radiation transfer in canopy with high vertical resolution is developed. Differing from the two-stream approximate radiation transfer model commonly used in the land surface models, the generalized model takes into account the effect of complicated canopy morphology and inhomogeneous optical properties of leaves on radiation transfer within the canopy. In the model, the total leaf area index (LAI) of the canopy is divided into many layers. At a given layer, the influences of diffuse radiation angle distributions and leaf angle distributions on radiation transfer within the canopy are considered. The derivation of equations serving the model are described in detail, and these can deal with various diffuse radiation transfers in quite broad categories of canopy with quite inhomogeneous vertical structures and uneven leaves with substantially different optical properties of adaxial and abaxial faces of the leaves. The model is used to simulate the radiation transfer for canopies with horizontal leaves to validate the generalized model. Results from the model are compared with those from the two-stream scheme, and differences between these two models are discussed.

  7. Medium term ecohydrological response of peatland bryophytes to canopy disturbance

    Science.gov (United States)

    Leonard, Rhoswen; Kettridge, Nick; Krause, Stefan; Devito, Kevin; Granath, Gustaf; Petrone, Richard; Mandoza, Carl; Waddington, James Micheal

    2016-04-01

    Canopy disturbance in northern forested peatlands is widespread. Canopy changes impact the ecohydrological function of moss and peat, which provide the principal carbon store within these carbon rich ecosystems. Different mosses have contrasting contributions to carbon and water fluxes (e.g. Sphagnum fuscum and Pleurozium schreberi) and are strongly influenced by canopy cover. As a result, changes in canopy cover lead to long-term shifts in species composition and associated ecohydrological function. Despite this, the medium-term response to such disturbance, the associated lag in this transition to a new ecohydrological and biogeochemical regime, is not understood. Here we investigate this medium term ecohydrological response to canopy removal using a randomised plot design within a north Albertan peatland. We show no significant ecohydrological change in treatment plots four years after canopy removal. Notably, Pleurozium schreberi and Sphagnum fuscum remained within respective plots post treatment and there was no significant difference in plot resistance to evapotranspiration or carbon exchange. Our results show that canopy removal alone has little impact on bryophyte ecohydrology in the short/medium term. This resistance to disturbance contrasts strongly with dramatic short-term changes observed within mineral soils suggesting that concurrent shifts in the large scale hydrology induced within such disturbances are necessary to cause rapid ecohydrological transitions. Understanding this lagged response is critical to determine the decadal response of carbon and water fluxes in response to disturbance and the rate at which important medium term ecohydrological feedbacks are invoked.

  8. Development of a multispectral sensor for crop canopy temperature measurement

    Science.gov (United States)

    Quantifying spatial and temporal variability in plant stress has precision agriculture applications in controlling variable rate irrigation and variable rate nutrient application. One approach to plant stress detection is crop canopy temperature measurement by the use of thermographic or radiometric...

  9. Leaf Aging of Amazonian Canopy Trees: Insights to Tropical Ecological Processes and Satellited Detected Canopy Dynamics

    Science.gov (United States)

    Chavana-Bryant, C.; Malhi, Y.; Gerard, F.

    2015-12-01

    Leaf aging is a fundamental driver of changes in leaf traits, thereby, regulating ecosystem processes and remotely-sensed canopy dynamics. Leaf age is particularly important for carbon-rich tropical evergreen forests, as leaf demography (leaf age distribution) has been proposed as a major driver of seasonal productivity in these forests. We explore leaf reflectance as a tool to monitor leaf age and develop a novel spectra-based (PLSR) model to predict age using data from a phenological study of 1,072 leaves from 12 lowland Amazonian canopy tree species in southern Peru. Our results demonstrate monotonic decreases in LWC and Pmass and increase in LMA with age across species; Nmass and Cmassshowed monotonic but species-specific age responses. Spectrally, we observed large age-related variation across species, with the most age-sensitive spectral domains found to be: green peak (550nm), red edge (680-750 nm), NIR (700-850 nm), and around the main water absorption features (~1450 and ~1940 nm). A spectra-based model was more accurate in predicting leaf age (R2= 0.86; %RMSE= 33) compared to trait-based models using single (R2=0.07 to 0.73; %RMSE=7 to 38) and multiple predictors (step-wise analysis; R2=0.76; %RMSE=28). Spectral and trait-based models established a physiochemical basis for the spectral age model. The relative importance of the traits modifying the leaf spectra of aging leaves was: LWC>LMA>Nmass>Pmass,&Cmass. Vegetation indices (VIs), including NDVI, EVI2, NDWI and PRI were all age-dependent. This study highlights the importance of leaf age as a mediator of leaf traits, provides evidence of age-related leaf reflectance changes that have important impacts on VIs used to monitor canopy dynamics and productivity, and proposes a new approach to predicting and monitoring leaf age with important implications for remote sensing.

  10. The Golden Canopies (Infant Radiant Warmer)

    Science.gov (United States)

    1978-01-01

    The cradle warmer is based on technology in heated transparent materials developed by Sierracin Corporation, Sylmar, California he original application was in heated faceplates for the pressure suit heated faceplates worn by pilots of an Air Force/NASA reconnaissance and weather research plane. Later, Sierracin advanced the technology for other applications, among them the cockpit windows of the NASA X-15 supersonic research vehicle and the helmet faceplates of Apollo astronauts. Adapting the technology to hospital needs, Sierracin teamed with Cavitron Corporation, Anaheim, California, which produces the cradle warmer and two other systems employing Sierracin's electrically-heated transparencies. Working to combat the infant mortality rate, hospitals are continually upgrading delivery room and nursery care techniques. Many have special procedures and equipment to protect infants during the "period of apprehension," the critical six to 12 hours after delivery. One such item of equipment is an aerospace spinoff called the Infant Radiant Warmer, a "golden canopy" which provides uniform, controlled warmth to the infant's cradle. Warmth is vitally important to all newborns, particularly premature babies; they lose heat more rapidly than adults because they have greater surface area in comparison with body mass.

  11. Heterogeneity Analysis of Cucumber Canopy in the Solar Greenhouse

    Institute of Scientific and Technical Information of China (English)

    QIAN Ting-ting; LU Sheng-lian; ZHAO Chun-jiang; GUO Xin-yu; WEN Wei-liang; DU jian-jun

    2014-01-01

    Detailed analysis of canopy structural heterogeneity is an essential step in conducting parameters for a canopy structural model. This paper aims to analyze the structural heterogeneity of a cucumber (Cucumis sativus L.) canopy by means of analyzing leaf distribution in a greenhouse environment with natural sunlight and also to assess the effect of structural canopy heterogeneity on light interception and photosynthesis. Two experiments and four measurements were carried out in autumn 2011 and spring 2012. A static virtual three-dimensional (3D) canopy structure was reconstructed using a 3D digitizing method. The diurnal variation of photosynthesis rate was measured using CIRAS-2 photosynthesis system. The results showed that, leaf azimuth as tested with the Rayleigh-test was homogeneous at vine tip over stage but turned heterogeneous at fruit harvest stage. After eliminating the inlfuence of the environment on the azimuth using the von Mises-Fisher method, the angle between two successive leaves was 144°;at the same time, a rule for the azimuth distribution in the canopy was established, stating that the azimuth distribution in cucumber followed a law which was positive spin and anti-spin. Leaf elevation angle of south-oriented leaves was on average 13.8° higher than that of north-oriented leaves. The horizontal distribution of light interception and photosynthesis differed signiifcantly between differently oriented leaves. East-and west-oriented leaves exhibited the highest photosynthetic rate. In conclusion, detailed analysis of canopy structural heterogeneity in this study indicated that leaf azimuth and elevation angle were heterogeneous in cucumber canopy and they should be explicitly described as they have a great impact both on light distribution and photosynthesis.

  12. Seasonal changes in radiation penetration within mustard crop canopy

    OpenAIRE

    Adak, Tarun; Chakravarty, NVK

    2012-01-01

    Green leaf area index, dry matter production and economic seed yield are significantly influenced by dynamics of radiation penetration within oilseed crop canopy. Keeping this in view, following a two years field experiment with Indian mustard cultivars in IARI research farm, it was revealed that the radiation penetration at the early crop growth stage was high and then decreased within the canopy as the leaf area developed. The study indicated significant seasonal changes in radiation penetr...

  13. Simulations of tropical rainforest albedo: is canopy wetness important?

    OpenAIRE

    Silvia N.M. Yanagi; Costa, Marcos H.

    2011-01-01

    Accurate information on surface albedo is essential for climate modelling, especially for regions such as Amazonia, where the response of the regional atmospheric circulation to the changes on surface albedo is strong. Previous studies have indicated that models are still unable to correctly reproduce details of the seasonal variation of surface albedo. Therefore, it was investigated the role of canopy wetness on the simulated albedo of a tropical rainforest by modifying the IBIS canopy radia...

  14. Effects of species selection and management on forest canopy albedo

    OpenAIRE

    Otto, Juliane; Berveiller, Daniel; Bréon, François-Marie; Delpierre, Nicolas; Geppert, Gernot; Granier, André; Gunia, Katja; Jans, Wilma; Knohl, Alexander; Kuusk, Andres; Longdoz, Bernard; Moors, Eddy; Mund, Martina; Pinty, Bernard; Rautiainen, Miina

    2013-01-01

    Forest management is considered to be one of the key instruments available to mitigate climate change as it can lead to increased sequestration of atmospheric carbon dioxide. However, the changes in canopy albedo may neutralise or offset the climate benefits of carbon sequestration. Although there is an emerging body of literature linking canopy albedo to management, understanding is still fragmented. We make use of a generally applicable approach: we combine a stand-level forest gap model wi...

  15. Estimating canopy fuel parameters for Atlantic Coastal Plain forest types.

    Energy Technology Data Exchange (ETDEWEB)

    Parresol, Bernard, R.

    2007-01-15

    Abstract It is necessary to quantify forest canopy characteristics to assess crown fire hazard, prioritize treatment areas, and design treatments to reduce crown fire potential. A number of fire behavior models such as FARSITE, FIRETEC, and NEXUS require as input four particular canopy fuel parameters: 1) canopy cover, 2) stand height, 3) crown base height, and 4) canopy bulk density. These canopy characteristics must be mapped across the landscape at high spatial resolution to accurately simulate crown fire. Currently no models exist to forecast these four canopy parameters for forests of the Atlantic Coastal Plain, a region that supports millions of acres of loblolly, longleaf, and slash pine forests as well as pine-broadleaf forests and mixed species broadleaf forests. Many forest cover types are recognized, too many to efficiently model. For expediency, forests of the Savannah River Site are categorized as belonging to 1 of 7 broad forest type groups, based on composition: 1) loblolly pine, 2) longleaf pine, 3) slash pine, 4) pine-hardwood, 5) hardwood-pine, 6) hardwoods, and 7) cypress-tupelo. These 7 broad forest types typify forests of the Atlantic Coastal Plain region, from Maryland to Florida.

  16. Canopy position has a profound effect on soybean seed composition.

    Science.gov (United States)

    Huber, Steven C; Li, Kunzhi; Nelson, Randall; Ulanov, Alexander; DeMuro, Catherine M; Baxter, Ivan

    2016-01-01

    Although soybean seeds appear homogeneous, their composition (protein, oil and mineral concentrations) can vary significantly with the canopy position where they were produced. In studies with 10 cultivars grown over a 3-yr period, we found that seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy. Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals. Therefore, on a whole plant basis, the uptake and allocation of S, Zn and Fe to seeds correlated with the production and allocation of reduced N to seed protein; however, the reduced N and correlated minerals (S, Zn and Fe) showed different patterns of allocation among node positions. For example, while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position. Altering the microenvironment within the soybean canopy by removing neighboring plants at flowering increased protein concentration in particular at lower node positions and thus altered the node-position gradient in protein (and oil) without altering the distribution of Mg, Fe and Cu, suggesting different underlying control mechanisms. Metabolomic analysis of developing seeds at different positions in the canopy suggests that availability of free asparagine may be a positive determinant of storage protein accumulation in seeds and may explain the increased protein accumulation in seeds produced at the top of the canopy. Our results establish node-position variation in seed constituents and provide a new experimental system to identify genes controlling key aspects of seed composition. In addition, our results provide an unexpected and simple approach to link agronomic practices to improve human nutrition and health

  17. Isotopic characteristics of canopies in simulated leaf assemblages

    Science.gov (United States)

    Graham, Heather V.; Patzkowsky, Mark E.; Wing, Scott L.; Parker, Geoffrey G.; Fogel, Marilyn L.; Freeman, Katherine H.

    2014-11-01

    The geologic history of closed-canopy forests is of great interest to paleoecologists and paleoclimatologists alike. Closed canopies have pronounced effects on local, continental and global rainfall and temperature patterns. Although evidence for canopy closure is difficult to reconstruct from the fossil record, the characteristic isotope gradients of the "canopy effect" could be preserved in leaves and proxy biomarkers. To assess this, we employed new carbon isotopic data for leaves collected in diverse light environments within a deciduous, temperate forest (Maryland, USA) and for leaves from a perennially closed canopy, moist tropical forest (Bosque Protector San Lorenzo, Panamá). In the tropical forest, leaf carbon isotope values range 10‰, with higher δ13Cleaf values occurring both in upper reaches of the canopy, and with higher light exposure and lower humidity. Leaf fractionation (Δleaf) varied negatively with height and light and positively with humidity. Vertical 13C enrichment in leaves largely reflects changes in Δleaf, and does not trend with δ13C of CO2 within the canopy. At the site in Maryland, leaves express a more modest δ13C range (∼6‰), with a clear trend that follows both light and leaf height. Using a model we simulate leaf assemblage isotope patterns from canopy data binned by elevation. The re-sampling (bootstrap) model determined both the mean and range of carbon isotope values for simulated leaf assemblages ranging in size from 10 to over 1000 leaves. For the tropical forest data, the canopy's isotope range is captured with 50 or more randomly sampled leaves. Thus, with a sufficient number of fossil leaves it is possible to distinguish isotopic gradients in an ancient closed canopy forest from those in an open forest. For very large leaf assemblages, mean isotopic values approximate the δ13C of carbon contributed by leaves to soil and are similar to observed δ13Clitter values at forested sites within Panamá, including the

  18. Canopy position has a profound effect on soybean seed composition

    Science.gov (United States)

    Ulanov, Alexander; DeMuro, Catherine M.

    2016-01-01

    Although soybean seeds appear homogeneous, their composition (protein, oil and mineral concentrations) can vary significantly with the canopy position where they were produced. In studies with 10 cultivars grown over a 3-yr period, we found that seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy. Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals. Therefore, on a whole plant basis, the uptake and allocation of S, Zn and Fe to seeds correlated with the production and allocation of reduced N to seed protein; however, the reduced N and correlated minerals (S, Zn and Fe) showed different patterns of allocation among node positions. For example, while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position. Altering the microenvironment within the soybean canopy by removing neighboring plants at flowering increased protein concentration in particular at lower node positions and thus altered the node-position gradient in protein (and oil) without altering the distribution of Mg, Fe and Cu, suggesting different underlying control mechanisms. Metabolomic analysis of developing seeds at different positions in the canopy suggests that availability of free asparagine may be a positive determinant of storage protein accumulation in seeds and may explain the increased protein accumulation in seeds produced at the top of the canopy. Our results establish node-position variation in seed constituents and provide a new experimental system to identify genes controlling key aspects of seed composition. In addition, our results provide an unexpected and simple approach to link agronomic practices to improve human nutrition and health

  19. The Canopy Conductance of a Humid Grassland

    Science.gov (United States)

    Lu, C. T.; Hsieh, C. I.

    2015-12-01

    Penman-Monteith equation is widely used for estimating latent heat flux. The key parameter for implementing this equation is the canopy conductance (gc). Recent research (Blaken and Black, 2004) showed that gc could be well parameterized by a linear function of An/ (D0* X0c), where An represents net assimilation, D0 is leaf level saturation deficit, and X0c is CO2 mole fraction. In this study, we tried to use the same idea for estimating gcfor a humid grassland. The study site was located in County Cork, southwest Ireland (51o59''N 8o46''W), and perennial ryegrass (Lolium perenne L.) was the dominant grass species in this area. An eddy covariance system was used to measure the latent heat flux above this humid grassland. The measured gc was calculated by rearranging Penman-Monteith equation combined with the measured latent heat flux. Our data showed that the gc decreased as the vapor pressure deficit and temperature increased. And it increased as the net radiation increased. Therefore, we found out that the best parameterization of gc was a linear function of the product of the vapor deficit, temperature, and net radiation. Also, we used the gc which was estimated by this linear function to predict the latent heat flux by Penman-Monteith equation and compared the predictions with those where the gc was chosen to be a fixed value. Our analysis showed that this simple linear function for gc can improve the latent heat flux predictions (R square increased from 0.48 to 0.66).

  20. Simulation of Snow Processes Beneath a Boreal Scots Pine Canopy

    Institute of Scientific and Technical Information of China (English)

    LI Weiping; LUO Yong; XIA Kun; LIU Xin

    2008-01-01

    A physically-based multi-layer snow model Snow-Atmosphere-Soil-Transfer scheme (SAST) and a land surface model Biosphere-Atmosphere Transfer Scheme (BATS) were employed to investigate how boreal forests influence snow accumulation and ablation under the canopy. Mass balance and energetics of snow beneath a Scots pine canopy in Finland at different stages of the 2003-2004 and 2004-2005 snow seasons are analyzed. For the fairly dense Scots pine forest, drop-off of the canopy-intercepted snow contributes, in some cases, twice as much to the underlying snowpack as the direct throughfall of snow. During early winter snow melting, downward turbulent sensible and condensation heat fluxes play a dominant role together with downward net longwave radiation. In the final stage of snow ablation in middle spring, downward net all-wave radiation dominates the snow melting. Although the downward sensible heat flux is comparable to the net solar radiation during this period, evaporative cooling of the melting snow surface makes the turbulent heat flux weaker than net radiation. Sensitivities of snow processes to leaf area index (LAI) indicate that a denser canopy speeds up early winter snowmelt, but also suppresses melting later in the snow season. Higher LAI increases the interception of snowfall, therefore reduces snow accumulation under the canopy during the snow season; this effect and the enhancement of downward longwave radiation by denser foliage outweighs the increased attenuation of solar radiation, resulting in earlier snow ablation under a denser canopy. The difference in sensitivities to LAI in two snow seasons implies that the impact of canopy density on the underlying snowpack is modulated by interannual variations of climate regimes.

  1. The influence of the forest canopy on nutrient cycling.

    Science.gov (United States)

    Prescott, Cindy E

    2002-11-01

    Rates of key soil processes involved in recycling of nutrients in forests are governed by temperature and moisture conditions and by the chemical and physical nature of the litter. The forest canopy influences all of these factors and thus has a large influence on nutrient cycling. The increased availability of nutrients in soil in clearcuts illustrates how the canopy retains nutrients (especially N) on site, both by storing nutrients in foliage and through the steady input of available C in litter. The idea that faster decomposition is responsible for the flush of nitrate in clearcuts has not been supported by experimental evidence. Soil N availability increases in canopy gaps as small as 0.1 ha, so natural disturbances or partial harvesting practices that increase the complexity of the canopy by creating gaps will similarly increase the spatial variability in soil N cycling and availability within the forest. Canopy characteristics affect the amount and composition of leaf litter produced, which largely determines the amount of nutrients to be recycled and the resulting nutrient availability. Although effects of tree species on soil nutrient availability were thought to be brought about largely through differences in the decomposition rate of their foliar litter, recent studies indicate that the effect of tree species can be better predicted from the mass and nutrient content of litter produced, hence total nutrient return, than from litter decay rate. The greater canopy complexity in mixed species forests creates similar heterogeneity in nutritional characteristics of the forest floor. Site differences in slope position, parent material and soil texture lead to variation in species composition and productivity of forests, and thus in the nature and amount of litter produced. Through this positive feedback, the canopy accentuates inherent differences in site fertility. PMID:12414379

  2. Canopy Interception for a Tallgrass Prairie under Juniper Encroachment.

    Science.gov (United States)

    Zou, Chris B; Caterina, Giulia L; Will, Rodney E; Stebler, Elaine; Turton, Donald

    2015-01-01

    Rainfall partitioning and redistribution by canopies are important ecohydrological processes underlying ecosystem dynamics. We quantified and contrasted spatial and temporal variations of rainfall redistribution for a juniper (Juniperus virginiana, redcedar) woodland and a tallgrass prairie in the south-central Great Plains, USA. Our results showed that redcedar trees had high canopy storage capacity (S) ranging from 2.14 mm for open stands to 3.44 mm for closed stands. The canopy funneling ratios (F) of redcedar trees varied substantially among stand type and tree size. The open stands and smaller trees usually had higher F values and were more efficient in partitioning rainfall into stemflow. Larger trees were more effective in partitioning rainfall into throughfall and no significant changes in the total interception ratios among canopy types and tree size were found. The S values were highly variable for tallgrass prairie, ranging from 0.27 mm at early growing season to 3.86 mm at senescence. As a result, the rainfall interception by tallgrass prairie was characterized by high temporal instability. On an annual basis, our results showed no significant difference in total rainfall loss to canopy interception between redcedar trees and tallgrass prairie. Increasing structural complexity associated with redcedar encroachment into tallgrass prairie changes the rainfall redistribution and partitioning pattern at both the temporal and spatial scales, but does not change the overall canopy interception ratios compared with unburned and ungrazed tallgrass prairie. Our findings support the idea of convergence in interception ratio for different canopy structures under the same precipitation regime. The temporal change in rainfall interception loss from redcedar encroachment is important to understand how juniper encroachment will interact with changing rainfall regime and potentially alter regional streamflow under climate change.

  3. Canopy Interception for a Tallgrass Prairie under Juniper Encroachment.

    Directory of Open Access Journals (Sweden)

    Chris B Zou

    Full Text Available Rainfall partitioning and redistribution by canopies are important ecohydrological processes underlying ecosystem dynamics. We quantified and contrasted spatial and temporal variations of rainfall redistribution for a juniper (Juniperus virginiana, redcedar woodland and a tallgrass prairie in the south-central Great Plains, USA. Our results showed that redcedar trees had high canopy storage capacity (S ranging from 2.14 mm for open stands to 3.44 mm for closed stands. The canopy funneling ratios (F of redcedar trees varied substantially among stand type and tree size. The open stands and smaller trees usually had higher F values and were more efficient in partitioning rainfall into stemflow. Larger trees were more effective in partitioning rainfall into throughfall and no significant changes in the total interception ratios among canopy types and tree size were found. The S values were highly variable for tallgrass prairie, ranging from 0.27 mm at early growing season to 3.86 mm at senescence. As a result, the rainfall interception by tallgrass prairie was characterized by high temporal instability. On an annual basis, our results showed no significant difference in total rainfall loss to canopy interception between redcedar trees and tallgrass prairie. Increasing structural complexity associated with redcedar encroachment into tallgrass prairie changes the rainfall redistribution and partitioning pattern at both the temporal and spatial scales, but does not change the overall canopy interception ratios compared with unburned and ungrazed tallgrass prairie. Our findings support the idea of convergence in interception ratio for different canopy structures under the same precipitation regime. The temporal change in rainfall interception loss from redcedar encroachment is important to understand how juniper encroachment will interact with changing rainfall regime and potentially alter regional streamflow under climate change.

  4. Groundlayer vegetation gradients across oak woodland canopy gaps

    Science.gov (United States)

    Pavlovic, N.B.; Grundel, R.; Sluis, W.

    2006-01-01

    Frequency of groundlayer plants was measured across oak woodland canopy gaps at three sites in northwest Indiana to examine how vegetation varied with gap size, direction along the gap edge, and microhabitat. Microhabitats were defined as under the canopy adjacent to the gap, along the gap edge, and within the gap. Gap-sites consisted of gaps plus adjacent tree canopy. Gaps were classified as small (16 ± 1 m2), medium (97 ± 8), and large (310 ± 32). Neither richness nor diversity differed among microhabitats, gap sizes, or edges. Similarity between microhabitats wthin a gap-site increased as the distance between plots decreased and as the difference in PAR decreased, the latter explaining twice the variation in percent dissimilarity compared to Mg concentration, A horizon depth, and litter cover. Diervilla lonicera, Frageria virginiana, Helianthus divaricatus, Polygonatum pubescens, Quercus velutina, Smilacena stellata, and Tradescantia ohiensis decreased, whileTephrosia virginiana and legumes increased in frequency, from canopy to gap, and C4 grasses peaked at the gap edge, independent of gap size. Additional species frequency varied across the microhabitat gradient within specific sites. Sorghastrum nutans was three times more frequent in gaps at large sites than elsewhere. The vegetation in medium-sized gap-sites was more variable than within small and large gap-sites, suggesting greater environmental heterogeneity at that scale. Within gap-sites, vegetation was more heterogeneous within edges and canopies than in gaps. Edges were more similar in composition to gaps than to canopy groundlayer within gap-sites. Few species varied significantly in frequency around the gap edge. The oak woodland groundlayer on sandy substrates can be characterized as a mosaic of forb dominated vegetation that varies across light gradients associated with canopy gaps, transitioning to islands of grassland vegetation when gaps exceed 160 m2.

  5. Characterization of Canopy Layering in Forested Ecosystems Using Full Waveform Lidar

    Science.gov (United States)

    Whitehurst, Amanda S.; Swatantran, Anu; Blair, J. Bryan; Hofton, Michelle A.; Dubayah, Ralph

    2013-01-01

    Canopy structure, the vertical distribution of canopy material, is an important element of forest ecosystem dynamics and habitat preference. Although vertical stratification, or "canopy layering," is a basic characterization of canopy structure for research and forest management, it is difficult to quantify at landscape scales. In this paper we describe canopy structure and develop methodologies to map forest vertical stratification in a mixed temperate forest using full-waveform lidar. Two definitions-one categorical and one continuous-are used to map canopy layering over Hubbard Brook Experimental Forest, New Hampshire with lidar data collected in 2009 by NASA's Laser Vegetation Imaging Sensor (LVIS). The two resulting canopy layering datasets describe variation of canopy layering throughout the forest and show that layering varies with terrain elevation and canopy height. This information should provide increased understanding of vertical structure variability and aid habitat characterization and other forest management activities.

  6. Characterization of Canopy Layering in Forested Ecosystems Using Full Waveform Lidar

    Directory of Open Access Journals (Sweden)

    Ralph Dubayah

    2013-04-01

    Full Text Available Canopy structure, the vertical distribution of canopy material, is an important element of forest ecosystem dynamics and habitat preference. Although vertical stratification, or “canopy layering,” is a basic characterization of canopy structure for research and forest management, it is difficult to quantify at landscape scales. In this paper we describe canopy structure and develop methodologies to map forest vertical stratification in a mixed temperate forest using full-waveform lidar. Two definitions—one categorical and one continuous—are used to map canopy layering over Hubbard Brook Experimental Forest, New Hampshire with lidar data collected in 2009 by NASA’s Laser Vegetation Imaging Sensor (LVIS. The two resulting canopy layering datasets describe variation of canopy layering throughout the forest and show that layering varies with terrain elevation and canopy height. This information should provide increased understanding of vertical structure variability and aid habitat characterization and other forest management activities.

  7. Influence of canopy foliage on turbulence above tall deciduous vegetation

    Science.gov (United States)

    Shapkalijevski, Metodija; Moene, Arnold; Ouwersloot, Huug; Patton, Edward; Vilà-Guerau de Arellano, Jordi

    2015-04-01

    In this study, the role of tree phenology on the atmospheric turbulence over tall vegetation is investigated. Our aim is to study dimensionless mean gradients, variances, and the turbulent kinetic energy (TKE) within the roughness sublayer (RSL), and their dependence on the leaf state of the canopy and the stability regimes. To do this, we analyse observations, that are continuously collected over a whole season above and in a walnut tree orchard during the Canopy Horizontal Array Turbulence Study (CHATS) field experiment near Dixon, California. To support this data analysis, we compare profiles of vertical fluxes and co-variances, as well as vertical gradients of mean wind, temperature and humidity, with empirically derived dimensionless gradients from previous studies and results from a second-order closure turbulence diagnostic model. In doing so, we study the differences in the calculation of the dimensionless gradients between recently developed model approaches that account for the RSL effects on these gradients against representations that omit those effects. The observations and model results are non-dimensionalized using atmospheric surface layer scaling, paying special attention to the displacement height. The latter is calculated from the observations and depends on the variable under consideration and the leaf state. Our results for the dimensionless gradients of momentum, heat and moisture show a reduction of these variables closer to the canopy top compared to the standard Monin-Obukhov similarity theory (MOST) for both unstable and near neutral conditions. We find that the reduction is larger for canopy with leaves than for leafless canopy. This confirms the applicability of the aforementioned RSL models. Their results are in better agreement with the observations for the fully vegetated canopy then for the leafless canopy. With regard to the TKE-budget, our analysis shows that turbulent transport is increasingly important term of the budget when

  8. A comparison of models to estimate in-canopy photosynthetically active radiation and their influence on canopy stomatal resistance

    Science.gov (United States)

    Zhang, Leiming; Moran, Michael D.; Brook, Jeffrey R.

    The models for photosynthetically active radiation (PAR) used in a multi-layer canopy stomatal resistance (CSR) model developed by Baldocchi et al. (Atmospheric Environment 21 (1987) 91-101) and in a two-big-leaf CSR model developed by Hicks et al. (Water, Air and Soil Pollution 36 (1987) 311) are investigated in this study. The PAR received by shaded leaves in Baldocchi et al. (1987) is found to be larger than that predicted by a canopy radiative-transfer model developed by Norman (in: Barfield, Gerber, (Eds.), Modification of the Aerial Environment of Crops. ASAE Monograph No. 2. American Society for Agricultural. Engineering, St. Joseph, MI, 1979, p. 249) by as much as 50% even though the Baldocchi et al. (1987) model is indirectly based on Norman's model. This larger value of PAR results in turn in a smaller CSR by as much as 30% for canopies with larger leaf area indexes. A new formula to predict vertical profiles for PAR received by shaded leaves inside a canopy is suggested in the present study based on Norman (1979) and agrees well with the original model of Norman (1979). The simple treatment used in Hicks et al. (1987) for canopy-average PAR received by shaded leaves is found to diverge for canopies with leaf area indexes not close to two A new empirical formula for canopy-average PAR is then suggested for use in a two-big-leaf model, and it is shown that under most conditions the modified two-big-leaf CSR model can predict reasonable values when compared with the more complex multi-layer CSR model. Both the modified multi-layer CSR model and the modified two-big-leaf CSR model are also shown to predict reasonable dry deposition velocities for O 3 when compared to several sets of measurements.

  9. Emergence time in forest bats: the influence of canopy closure

    Science.gov (United States)

    Russo, Danilo; Cistrone, Luca; Jones, Gareth

    2007-01-01

    The role of the forest canopy in protecting bats roosting in forest from predators is poorly known. We analysed the effect of canopy closure on emergence time in Barbastella barbastellus in a mountainous area of central Italy. We used radio-tracking to locate roosts and filmed evening emergence. Comparisons were made between roosts in open areas and those in dense forest. Median emergence time and illuminance were correlated. Moreover, from pregnancy to late lactation bats emerged progressively earlier, probably because of the exceptionally high wing loading affecting pregnant bats and the high energy demand of lactation. A significant influence of canopy closure on median emergence time was revealed after adjusting for the effects of light and reproductive state. Bats in open habitat emerged later than those roosting beneath closed canopy. In cluttered habitats, predators relying on vision may find it more difficult to detect and catch bats at light levels which would offer more chances of success when attacking prey in open habitats. Bats in dense forest are less vulnerable to predators and may take advantage of an earlier emergence by prolonging foraging. Although more vulnerable, lactating females roosting at open sites may benefit from warmer roosting conditions. Roosts in dense forest may be preferred under intense predation pressure. Forest management should favour canopy heterogeneity to provide bats with a range of roosting conditions. Our work emphasises the role of a fine-grained spatial scale in the roosting ecology of forest bats.

  10. Seasonal bird use of canopy gaps in a bottomland forest.

    Energy Technology Data Exchange (ETDEWEB)

    Bowen, Liessa, T,; Moorman, Christopher, E.; Kilgo, John, C.

    2007-04-01

    ABSTRACT.—Bird use of small canopy gaps within mature forests has not been well studied, particularly across multiple seasons. We investigated seasonal differences in bird use of gap and forest habitat within a bottomland hardwood forest in the Upper Coastal Plain of South Carolina. Gaps were 0.13- to 0.5-ha, 7- to 8-year-old group-selection timber harvest openings. Our study occurred during four bird-use periods (spring migration, breeding, postbreeding, and fall migration) in 2001 and 2002. We used plot counts and mist netting to estimate bird abundance in canopy gaps and surrounding mature forest habitats. Using both survey methods, we observed more birds, including forest-interior species, forest-edge species, field-edge species, and several individual species in canopy gap and gap-edge habitats than in surrounding mature forest during all periods. Interactions between period and habitat type often were significant in models, suggesting a seasonal shift in habitat use. Bird activity generally shifted between the interior of canopy gaps and the immediate gap edge, but many species increased their use of forested habitat during the breeding period. This suggests that many species of birds selectively choose gap and gap-edge habitat over surrounding mature forest during the non-breeding period. Creation of small canopy gaps within a mature forest may increase local bird species richness. The reasons for increased bird activity in gaps remain unclear.

  11. Eo-1 Hyperion Measures Canopy Drought Stress In Amazonia

    Science.gov (United States)

    Asner, Gregory P.; Nepstad, Daniel; Cardinot, Gina; Moutinho, Paulo; Harris, Thomas; Ray, David

    2004-01-01

    The central, south and southeast portions of the Amazon Basin experience a period of decreased cloud cover and precipitation from June through November. There are likely important effects of seasonal and interannual rainfall variation on forest leaf area index, canopy water stress, productivity and regional carbon cycling in the Amazon. While both ground and spaceborne studies of precipitation continue to improve, there has been almost no progress made in observing forest canopy responses to rainfall variability in the humid tropics. This shortfall stems from the large stature of the vegetation and great spatial extent of tropical forests, both of which strongly impede field studies of forest responses to water availability. Those few studies employing satellite measures of canopy responses to seasonal and interannual drought (e.g., Bohlman et al. 1998, Asner et al. 2000) have been limited by the spectral resolution and sampling available from Landsat and AVHRR sensors. We report on a study combining the first landscape-level, managed drought experiment in Amazon tropical forest with the first spaceborne imaging spectrometer observations of this experimental area. Using extensive field data on rainfall inputs, soil water content, and both leaf and canopy responses, we test the hypothesis that spectroscopic signatures unique to hyperspectral observations can be used to quantify relative differences in canopy stress resulting from water availability.

  12. The nocturnal water cycle in an open-canopy forest

    Science.gov (United States)

    Berkelhammer, M.; Hu, J.; Bailey, A.; Noone, D. C.; Still, C. J.; Barnard, H.; Gochis, D.; Hsiao, G. S.; Rahn, T.; Turnipseed, A.

    2013-09-01

    The movement of moisture into, out-of, and within forest ecosystems is modulated by feedbacks that stem from processes which couple plants, soil, and the atmosphere. While an understanding of these processes has been gleaned from Eddy Covariance techniques, the reliability of the method suffers at night because of weak turbulence. During the summer of 2011, continuous profiles of the isotopic composition (i.e., δ18O and δD) of water vapor and periodic measurements of soil, leaf, and precipitation pools were measured in an open-canopy ponderosa pine forest in central Colorado to study within-canopy nocturnal water cycling. The isotopic composition of the nocturnal water vapor varies significantly based on the relative contributions of the three major hydrological processes acting on the forest: dewfall, exchange of moisture between leaf waters and canopy vapor, and periodic mixing between the canopy and background air. Dewfall proved to be surprisingly common (˜30% of the nights) and detectable on both the surface and within the canopy through the isotopic measurements. While surface dew could be observed using leaf wetness and soil moisture sensors, dew in the foliage was only measurable through isotopic analysis of the vapor and often occurred even when no dew accumulated on the surface. Nocturnal moisture cycling plays a critical role in water availability in forest ecosystems through foliar absorption and transpiration, and assessing these dynamics, as done here, is necessary for fully characterizing the hydrological controls on terrestrial productivity.

  13. Advances in Nitrogen Loss Leached by Precipitation from Plant Canopy

    Institute of Scientific and Technical Information of China (English)

    LI Shi-qing; JI Chun-rong; FANG Ya-ning; CHEN Xiao-li; LI Sheng-xiu

    2008-01-01

    Function of canopy in changing nutrient cycle and flux is one of the focuses in recent years. On the basis of comprehensively appraising published research, we analyzed the nitrogen loss leaching from plant canopy and several factors which affected it. We pointed out the disadvantages of the published researches and the key issues that ought to be solved: (1) The menstruation need to be advanced, and the research should be carried out on nitrogen loss leaching from the canopy of the field plant. (2) If the nitrogen is leached from the plant canopy, the research on the type of nitrogen loss should be carried out, and the nitrogen use efficiency of different varieties should be dealt on a research perspective with regard to the nitrogen leaching. (3) The research should be conducted on the mechanism and pathway, and the progress of nitrogen leaching; and the factors affecting nitrogen leaching should be included in the research, such as the leaf area of different growth stages, stomata densities, stomata conductance, and the apparent free space, which are beneficial to explain the mechanism of nitrogen leaching from the plant canopy.

  14. The Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS: model description and application to a temperate deciduous forest canopy

    Directory of Open Access Journals (Sweden)

    R. D. Saylor

    2013-01-01

    Full Text Available Forest canopies are primary emission sources of biogenic volatile organic compounds (BVOCs and have the potential to significantly influence the formation and distribution of secondary organic aerosol (SOA mass. Biogenically-derived SOA formed as a result of emissions from the widespread forests across the globe may affect air quality in populated areas, degrade atmospheric visibility, and affect climate through direct and indirect forcings. In an effort to better understand the formation of SOA mass from forest emissions, a 1-D column model of the multiphase physical and chemical processes occurring within and just above a vegetative canopy is being developed. An initial, gas-phase-only version of this model, the Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS, includes processes accounting for the emission of BVOCs from the canopy, turbulent vertical transport within and above the canopy and throughout the height of the planetary boundary layer (PBL, near-explicit representation of chemical transformations, mixing with the background atmosphere and bi-directional exchange between the atmosphere and canopy and the atmosphere and forest floor. The model formulation of ACCESS is described in detail and results are presented for an initial application of the modeling system to Walker Branch Watershed, an isoprene-emission-dominated forest canopy in the southeastern United States which has been the focal point for previous chemical and micrometeorological studies. Model results of isoprene profiles and fluxes are found to be consistent with previous measurements made at the simulated site and with other measurements made in and above mixed deciduous forests in the southeastern United States. Sensitivity experiments are presented which explore how canopy concentrations and fluxes of gas-phase precursors of SOA are affected by background anthropogenic nitrogen oxides (NOx. Results from these experiments suggest that the

  15. Convergent elevation trends in canopy chemical traits of tropical forests.

    Science.gov (United States)

    Asner, Gregory P; Martin, Roberta E

    2016-06-01

    The functional biogeography of tropical forests is expressed in foliar chemicals that are key physiologically based predictors of plant adaptation to changing environmental conditions including climate. However, understanding the degree to which environmental filters sort the canopy chemical characteristics of forest canopies remains a challenge. Here, we report on the elevation and soil-type dependence of forest canopy chemistry among 75 compositionally and environmentally distinct forests in nine regions, with a total of 7819 individual trees representing 3246 species collected, identified and assayed for foliar traits. We assessed whether there are consistent relationships between canopy chemical traits and both elevation and soil type, and evaluated the general role of phylogeny in mediating patterns of canopy traits within and across communities. Chemical trait variation and partitioning suggested a general model based on four interconnected findings. First, geographic variation at the soil-Order level, expressing broad changes in fertility, underpins major shifts in foliar phosphorus (P) and calcium (Ca). Second, elevation-dependent shifts in average community leaf dry mass per area (LMA), chlorophyll, and carbon allocation (including nonstructural carbohydrates) are most strongly correlated with changes in foliar Ca. Third, chemical diversity within communities is driven by differences between species rather than by plasticity within species. Finally, elevation- and soil-dependent changes in N, LMA and leaf carbon allocation are mediated by canopy compositional turnover, whereas foliar P and Ca are driven more by changes in site conditions than by phylogeny. Our findings have broad implications for understanding the global ecology of humid tropical forests, and their functional responses to changing climate.

  16. Experimental canopy removal enhances diversity of vernal pond amphibians.

    Science.gov (United States)

    Skelly, David K; Bolden, Susan R; Freidenburg, L Kealoha

    2014-03-01

    Vernal ponds are often treated as protected environments receiving special regulation and management. Within the landscapes where they are found, forest vegetation frequently dominates surrounding uplands and can grow to overtop and shade pond basins. Two bodies of research offer differing views of the role of forest canopy for vernal pond systems. Studies of landscape conversion suggest that removing forest overstory within uplands can cause local extinctions of amphibians by altering terrestrial habitat or hindering movement. Studies of canopy above pond basins imply an opposite relationship; encroachment of overstory vegetation can be associated with local extinctions potentially via changes in light, thermal, and food resource environments. Unresolved uncertainties about the role of forest canopy reveal significant gaps in our understanding of wetland species distributions and dynamics. Any misunderstanding of canopy influences is simultaneously important to managers because current practices emphasize promoting or conserving vegetation growth particularly within buffers immediately adjacent to ponds. We evaluated this apparent contradiction by conducting a landscape-scale, long-term experiment using 14 natural vernal ponds. Tree felling at six manipulated ponds was limited in spatial scope but was nevertheless effective in increasing water temperature. Compared with eight control ponds, manipulated ponds maintained more amphibian species during five years post-manipulation. There was little evidence that any species was negatively influenced, and the reproductive effort of species for which we estimated egg inputs maintained pretreatment population densities in manipulated compared with control ponds. Overall, our experiment shows that a carefully circumscribed reduction of overhead forest canopy can enhance the capacity of vernal ponds to support wildlife diversity and suggests a scale dependence of canopy influences on amphibians. These findings have

  17. Experimental canopy removal enhances diversity of vernal pond amphibians.

    Science.gov (United States)

    Skelly, David K; Bolden, Susan R; Freidenburg, L Kealoha

    2014-03-01

    Vernal ponds are often treated as protected environments receiving special regulation and management. Within the landscapes where they are found, forest vegetation frequently dominates surrounding uplands and can grow to overtop and shade pond basins. Two bodies of research offer differing views of the role of forest canopy for vernal pond systems. Studies of landscape conversion suggest that removing forest overstory within uplands can cause local extinctions of amphibians by altering terrestrial habitat or hindering movement. Studies of canopy above pond basins imply an opposite relationship; encroachment of overstory vegetation can be associated with local extinctions potentially via changes in light, thermal, and food resource environments. Unresolved uncertainties about the role of forest canopy reveal significant gaps in our understanding of wetland species distributions and dynamics. Any misunderstanding of canopy influences is simultaneously important to managers because current practices emphasize promoting or conserving vegetation growth particularly within buffers immediately adjacent to ponds. We evaluated this apparent contradiction by conducting a landscape-scale, long-term experiment using 14 natural vernal ponds. Tree felling at six manipulated ponds was limited in spatial scope but was nevertheless effective in increasing water temperature. Compared with eight control ponds, manipulated ponds maintained more amphibian species during five years post-manipulation. There was little evidence that any species was negatively influenced, and the reproductive effort of species for which we estimated egg inputs maintained pretreatment population densities in manipulated compared with control ponds. Overall, our experiment shows that a carefully circumscribed reduction of overhead forest canopy can enhance the capacity of vernal ponds to support wildlife diversity and suggests a scale dependence of canopy influences on amphibians. These findings have

  18. Convergent elevation trends in canopy chemical traits of tropical forests.

    Science.gov (United States)

    Asner, Gregory P; Martin, Roberta E

    2016-06-01

    The functional biogeography of tropical forests is expressed in foliar chemicals that are key physiologically based predictors of plant adaptation to changing environmental conditions including climate. However, understanding the degree to which environmental filters sort the canopy chemical characteristics of forest canopies remains a challenge. Here, we report on the elevation and soil-type dependence of forest canopy chemistry among 75 compositionally and environmentally distinct forests in nine regions, with a total of 7819 individual trees representing 3246 species collected, identified and assayed for foliar traits. We assessed whether there are consistent relationships between canopy chemical traits and both elevation and soil type, and evaluated the general role of phylogeny in mediating patterns of canopy traits within and across communities. Chemical trait variation and partitioning suggested a general model based on four interconnected findings. First, geographic variation at the soil-Order level, expressing broad changes in fertility, underpins major shifts in foliar phosphorus (P) and calcium (Ca). Second, elevation-dependent shifts in average community leaf dry mass per area (LMA), chlorophyll, and carbon allocation (including nonstructural carbohydrates) are most strongly correlated with changes in foliar Ca. Third, chemical diversity within communities is driven by differences between species rather than by plasticity within species. Finally, elevation- and soil-dependent changes in N, LMA and leaf carbon allocation are mediated by canopy compositional turnover, whereas foliar P and Ca are driven more by changes in site conditions than by phylogeny. Our findings have broad implications for understanding the global ecology of humid tropical forests, and their functional responses to changing climate. PMID:26582427

  19. Does canopy nitrogen uptake enhance carbon sequestration by trees?

    Science.gov (United States)

    Nair, Richard K F; Perks, Micheal P; Weatherall, Andrew; Baggs, Elizabeth M; Mencuccini, Maurizio

    2016-02-01

    Temperate forest (15) N isotope trace experiments find nitrogen (N) addition-driven carbon (C) uptake is modest as little additional N is acquired by trees; however, several correlations of ambient N deposition against forest productivity imply a greater effect of atmospheric nitrogen deposition than these studies. We asked whether N deposition experiments adequately represent all processes found in ambient conditions. In particular, experiments typically apply (15) N to directly to forest floors, assuming uptake of nitrogen intercepted by canopies (CNU) is minimal. Additionally, conventional (15) N additions typically trace mineral (15) N additions rather than litter N recycling and may increase total N inputs above ambient levels. To test the importance of CNU and recycled N to tree nutrition, we conducted a mesocosm experiment, applying 54 g N/(15) N ha(-1)  yr(-1) to Sitka spruce saplings. We compared tree and soil (15) N recovery among treatments where enrichment was due to either (1) a (15) N-enriched litter layer, or mineral (15) N additions to (2) the soil or (3) the canopy. We found that 60% of (15) N applied to the canopy was recovered above ground (in needles, stem and branches) while only 21% of (15) N applied to the soil was found in these pools. (15) N recovery from litter was low and highly variable. (15) N partitioning among biomass pools and age classes also differed among treatments, with twice as much (15) N found in woody biomass when deposited on the canopy than soil. Stoichiometrically calculated N effect on C uptake from (15) N applied to the soil, scaled to real-world conditions, was 43 kg C kg N(-1) , similar to manipulation studies. The effect from the canopy treatment was 114 kg C kg N(-1) . Canopy treatments may be critical to accurately represent N deposition in the field and may address the discrepancy between manipulative and correlative studies. PMID:26391113

  20. Investigation of the Loads on a Conventional Front and Rear Sliding Canopy

    Science.gov (United States)

    Dexter, Howard E.; Rickey, Edward A.

    1947-01-01

    As one phase of a comprehensive canopy load investigation, conventional front and rear sliding canopies which are typified by installation on the SB2C-4E airplane, were tested in the Langley full-scale tunnel to determine the pressure distributions and the aerodynamic loads on the canopies. A preliminary analysis of the results of these tests is presented in this report. Plots are presented that show the distribution of pressure at four longitudinal stations through each canopy for a range of conditions selected to determine the effects of varying canopy position, yaw, lift coefficient, and power. The results indicate that the maximum loads, based on the external-internal pressure differential, for the front and rear canopies were obtained with the airplane simulating the high speed flight condition. The highest loading on the front canopy was in the exploding direction for the configuration with the front and rear canopies closed. The highest loads on the rear canopy were in the crushing direction with the front canopy open and the rear canopy closed. For most of the simulated flight conditions, the highest loads on the front canopy, per unit area, were over twice as great as the highest loads on the rear canopy when the comparison was made for the most critical canopy configuration in each case. The external pressure distribution over the front and rear canopies, which were fairly symmetrical to 0 degree angle of yaw, were greatly distorted at other yaw attitudes, particularly for the propeller operating conditions. These distorted pressure distributions resulted in local exploding and crushing loads on both canopies which were often considerably higher than the average canopy loads.

  1. Canopy processes, fluxes and microclimate in a pine forest

    Energy Technology Data Exchange (ETDEWEB)

    Launiainen, S.

    2011-07-01

    Interaction between forests and the atmosphere occurs by radiative and turbulent transport. The fluxes of energy and mass between surface and the atmosphere directly influence the properties of the lower atmosphere and in longer time scales the global climate. Boreal forest ecosystems are central in the global climate system, and its responses to human activities, because they are significant sources and sinks of greenhouse gases and of aerosol particles. The aim of the present work was to improve our understanding on the existing interplay between biologically active canopy, microenvironment and turbulent flow and quantify. In specific, the aim was to quantify the contribution of different canopy layers to whole forest fluxes. For this purpose, long-term micrometeorological and ecological measurements made in a Scots pine (Pinus sylvestris) forest at SMEAR II research station in Southern Finland were used. The properties of turbulent flow are strongly modified by the interaction between the canopy elements: momentum is efficiently absorbed in the upper layers of the canopy, mean wind speed and turbulence intensities decrease rapidly towards the forest floor and power spectra is modulated by spectral short-cut . In the relative open forest, diabatic stability above the canopy explained much of the changes in velocity statistics within the canopy except in strongly stable stratification. Large eddies, ranging from tens to hundred meters in size, were responsible for the major fraction of turbulent transport between a forest and the atmosphere. Because of this, the eddy-covariance (EC) method proved to be successful for measuring energy and mass exchange inside a forest canopy with exception of strongly stable conditions. Vertical variations of within canopy microclimate, light attenuation in particular, affect strongly the assimilation and transpiration rates. According to model simulations, assimilation rate decreases with height more rapidly than stomatal

  2. Canopy reflectance, photosynthesis, and transpiration. III - A reanalysis using improved leaf models and a new canopy integration scheme

    Science.gov (United States)

    Sellers, P. J.; Berry, J. A.; Collatz, G. J.; Field, C. B.; Hall, F. G.

    1992-01-01

    The theoretical analyses of Sellers (1985, 1987), which linked canopy spectral reflectance properties to (unstressed) photosynthetic rates and conductances, are critically reviewed and significant shortcomings are identified. These are addressed in this article principally through the incorporation of a more sophisticated and realistic treatment of leaf physiological processes within a new canopy integration scheme. The results indicate that area-averaged spectral vegetation indices, as obtained from coarse resolution satellite sensors, may give good estimates of the area-integrals of photosynthesis and conductance even for spatially heterogenous (though physiologically uniform) vegetation covers.

  3. USGS Small-scale Dataset - 100-Meter Resolution Tree Canopy of Hawaii 201301 GeoTIFF

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for Hawaii, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree canopy data were derived...

  4. Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis

    OpenAIRE

    Toomey, Michael; Friedl, Mark; Frolking, Steve; Hufkens, Koen; Klosterman, Stephen; Sonnentag, Oliver; Baldocchi, Dennis; Bernacchi, Carl; Biraud, Sebastien; Bohrer, Gil; Brzostek, Edward; Burns, Sean P.; Coursolle, Carole; Hollinger, David Y.; Margolis, Hank A.

    2014-01-01

    The proliferation of digital cameras co-located with eddy covariance instrumentation provides new opportunities to better understand the relationship between canopy phenology and the seasonality of canopy photosynthesis. In this paper we analyze the abilities and limitations of canopy color metrics measured by digital repeat photography to track seasonal canopy development and photosynthesis, determine phenological transition dates, and estimate intra-annual and interannual variability in can...

  5. Modelling kinetics of plant canopy architecture: concepts and applications

    NARCIS (Netherlands)

    Birch, C.J.; Andrieu, B.; Fournier, C.; Vos, J.; Room, P.

    2003-01-01

    Most crop models simulate the crop canopy as an homogeneous medium. This approach enables modelling of mass and energy transfer through relatively simple equations, and is useful for understanding crop production. However, schematisation of an homogeneous medium cannot address the heterogeneous natu

  6. Modeling canopy CO2 exchange in the European Russian Arctic

    DEFF Research Database (Denmark)

    Kiepe, Isabell; Friborg, Thomas; Herbst, Mathias;

    2013-01-01

    In this study, we use the coupled photosynthesis-stomatal conductance model of Collatz et al. (1991) to simulate the current canopy carbon dioxide exchange of a heterogeneous tundra ecosystem in European Russia. For the parameterization, we used data obtained from in situ leaf level measurements ...

  7. Tree diversity and canopy cover in cocoa systems in Ghana

    DEFF Research Database (Denmark)

    Asare, Richard; Ræbild, Anders

    2016-01-01

    Cocoa (Theobroma cacao L.) growing systems in Ghana and West Africa consist of diverse tree species and densities.This study was conducted to determine factors that influence tree species configurations and how tree characteristics affect canopy cover in cocoa farms. Eighty-six farmers...

  8. Improving canopy sensor algorithms with soil and weather information

    Science.gov (United States)

    Nitrogen (N) need to support corn (Zea mays L.) production can be highly variable within fields. Canopy reflectance sensing for assessing crop N health has been implemented on many farmers’ fields to side-dress or top-dress variable-rate N application, but at times farmers report the performance of ...

  9. Estimating foliar biochemistry from hyperspectral data in mixed forest canopy

    DEFF Research Database (Denmark)

    Huber Gharib, Silvia; Kneubühler, Mathias; Psomas, Achilleas;

    2008-01-01

    data to estimate the foliar concentration of nitrogen, carbon and water in three mixed forest canopies in Switzerland. With multiple linear regression models, continuum-removed and normalized HyMap spectra were related to foliar biochemistry on an individual tree level. The six spectral wavebands used...

  10. Simulating canopy temperature for modelling heat stress in cereals

    Science.gov (United States)

    Crop models must be improved to account for the large effects of heat stress effects on crop yields. To date, most approaches in crop models use air temperature despite evidence that crop canopy temperature better explains yield reductions associated with high temperature events. This study presents...

  11. Predicting lettuce canopy photosynthesis with statistical and neural network models

    Science.gov (United States)

    Frick, J.; Precetti, C.; Mitchell, C. A.

    1998-01-01

    An artificial neural network (NN) and a statistical regression model were developed to predict canopy photosynthetic rates (Pn) for 'Waldman's Green' leaf lettuce (Latuca sativa L.). All data used to develop and test the models were collected for crop stands grown hydroponically and under controlled-environment conditions. In the NN and regression models, canopy Pn was predicted as a function of three independent variables: shootzone CO2 concentration (600 to 1500 micromoles mol-1), photosynthetic photon flux (PPF) (600 to 1100 micromoles m-2 s-1), and canopy age (10 to 20 days after planting). The models were used to determine the combinations of CO2 and PPF setpoints required each day to maintain maximum canopy Pn. The statistical model (a third-order polynomial) predicted Pn more accurately than the simple NN (a three-layer, fully connected net). Over an 11-day validation period, average percent difference between predicted and actual Pn was 12.3% and 24.6% for the statistical and NN models, respectively. Both models lost considerable accuracy when used to determine relatively long-range Pn predictions (> or = 6 days into the future).

  12. A New Mechanism of Canopy Effect in Unsaturated Freezing Soils

    Directory of Open Access Journals (Sweden)

    Teng Jidong

    2016-01-01

    Full Text Available Canopy effect refers to the phenomenon where moisture accumulates underneath an impervious cover. Field observation reveals that canopy effect can take place in relatively dry soils where the groundwater table is deep and can lead to full saturation of the soil immediately underneath the impervious cover. On the other hand, numerical analysis based on existing theories of heat and mass transfer in unsaturated soils can only reproduce a minor amount of moisture accumulation due to an impervious cover, particularly when the groundwater table is relatively deep. In attempt to explain the observed canopy effect in field, this paper proposes a new mechanism of moisture accumulation in unsaturated freezing soils: vapour transfer in such a soil is accelerated by the process of vapour-ice desublimation. A new approach for modelling moisture and heat movements is proposed, in which the phase change of evaporation, condensation and de-sublimation of vapor flow are taken into account. The computed results show that the proposed model can indeed reproduce the unusual moisture accumulation observed in relatively dry soils. The results also demonstrate that soil freezing fed by vapour transfer can result in a water content close to full saturation. Since vapour transfer is seldom considered in geotechnical design, the canopy effect deserves more attention during construction and earth works in cold and arid regions.

  13. Can Canopy Uptake Influence Nitrogen Acquisition and Allocation by Trees?

    Science.gov (United States)

    Nair, Richard; Perks, Mike; Mencuccini, Maurizio

    2015-04-01

    Nitrogen (N) fertilization due to atmospheric deposition of anthropogenic nitrogen (NDEP) may explain some of the net carbon (C) sink (0.6-0.7 Pg y-1) in temperate forests, but estimates of the additional C uptake due to atmospheric N additions (ΔCΔN) can vary by over an order of magnitude (~ 5 to 200 ΔCΔN). High estimates from several recent studies [e.g. Magnani (2007), Nature 447 848-850], deriving ΔCΔN from regional correlations between NDEP and measures of C uptake (such as eddy covariance -derived net ecosystem production, or forest inventory data) contradict estimates from other studies of 15N tracer applications added as fertilizer to the forest floor. A strong ΔCΔN effect requires nitrogen to be efficiently acquired by trees and allocated to high C:N, long-lived woody tissues, but these isotope experiments typically report relatively little (~ 20 %) of 15N added is found above-ground, with soil, often in a limited number of treatment events over relatively short periods of time. Excessive N deposition loads can induce negative physiological effects and limit the resulting ΔCΔN observed, and applying treatments to the soil may ignore the importance of canopy nitrogen uptake in overall forest nutrition. As canopies can directly take up nitrogen, the chronic, (relatively) low levels of ambient NDEP inputs from pollution may be acquired without some of the effects of heavy N loads, obtaining this N before it reaches the soil, and allowing canopies to substitute for, or supplement, edaphic N nutrition. The strength of this effect depends on how much N uptake can occur across the canopy under field conditions, and if this extra N supplies growth in woody tissues such as the stem, as well as the canopy. To test these ideas, we applied a low (~ 2.5 % above ambient NDEP) 15N treatment to Picea sitchensis saplings, targeting the soil or the canopy in monthly fertilizations for 16 months, and investigating 15N return in different age classes of biomass and

  14. Canopy storage capacity of xerophytic shrubs in Northwestern China

    Science.gov (United States)

    Wang, Xin-ping; Zhang, Ya-feng; Hu, Rui; Pan, Yan-xia; Berndtsson, Ronny

    2012-08-01

    SummaryThe capacity of shrub canopy water storage is a key factor in controlling the rainfall interception. Thus, it affects a variety of hydrological processes in water-limited arid desert ecosystems. Vast areas of revegetated desert ecosystems in Northwestern China are occupied by shrub and dwarf shrub communities. Yet, data are still scarce regarding their rainwater storage capacity. In this study, simulated rainfall tests were conducted in controlled conditions for three dominant xerophytic shrub types in the arid Tengger Desert. Eight rainfall intensities varying from 1.15 to 11.53 mm h-1 were used to determine the canopy water storage capacity. The simulated rainfall intensities were selected according to the long-term rainfall records in the study area. The results indicate that canopy storage capacity (expressed in water storage per leaf area, canopy projection area, biomass, and volume of shrub respectively) increased exponentially with increase in rainfall intensity for the selected shrubs. Linear relationships were found between canopy storage capacity and leaf area (LA) or leaf area index (LAI), although there was a striking difference in correlation between storage capacity and LA or LAI of Artemisia ordosica compared to Caragana korshinskii and Hedysarum scoparium. This is a result of differences in biometric characteristics, especially canopy morphology between the shrub species. Pearson correlation coefficient indicated that LA and dry biomass are better predictors as compared to canopy projection area and volume of samples for precise estimation of canopy water storage capacity. In terms of unit leaf area, mean storage capacity was 0.39 mm (range of 0.24-0.53 mm), 0.43 mm (range of 0.28-0.60 mm), and 0.61 mm (range of 0.29-0.89 mm) for C. korshinskii, H. scoparium, and A. ordosica, respectively. Correspondingly, divided per unit dry biomass, mean storage capacity was 0.51 g g-1 (range of 0.30-0.70 g g-1), 0.41 g g-1 (range of 0.26-0.57 g g-1), and

  15. SPATIAL CONTAGIOUSNESS OF CANOPY DISTURBANCE IN TROPICAL RAIN FOREST : AN INDIVIDUAL-TREE-BASED TEST

    NARCIS (Netherlands)

    Jansen, Patrick A.; Van Der Meer, Peter J.; Bongers, Frans

    2008-01-01

    Spatial contagiousness of canopy dynamics-the tendency of canopy disturbances to occur nearby existing canopy openings due to an elevated risk of tree fall around gaps-has been demonstrated in many temperate-zone forests, but only inferentially for tropical forests. Hypothesized mechanisms increasin

  16. Estimation of in-canopy ammonia sources and sinks in a fertilized Zea mays field

    Science.gov (United States)

    An analytical model was developed that describes the in-canopy vertical distribution of NH3 source and sinks and vertical fluxes in a fertilized agricultural setting using measured in-canopy concentration and wind speed profiles. This model was applied to quantify in-canopy air-s...

  17. Simulation of Canopy Leaf Inclination Angle in Rice

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiao-cui; LU Chuan-gen; HU Ning; YAO Ke-min; ZHANG Qi-jun; DAI Qi-gen

    2013-01-01

    A leaf inclination angle distribution model, which is applicable to simulate leaf inclination angle distribution in six heights of layered canopy at different growth stages, was established by component factors affecting plant type in rice. The accuracy of the simulation results was validated by measured values from a field experiment. The coefficient of determination (R2) and the root mean square error (RMSE) between the simulated and measured values were 0.9472 and 3.93%, respectively. The simulation results showed that the distribution of leaf inclination angles differed among the three plant types. The leaf inclination angles were larger in the compact variety Liangyoupeijiu with erect leaves than in the loose variety Shanyou 63 with droopy leaves and the intermediate variety Liangyou Y06. The leaf inclination angles were distributed in the lower range in Shanyou 63, which matched up with field measurements. The distribution of leaf inclination angles in the same variety changed throughout the seven growth stages. The leaf inclination angles enlarged gradually from transplanting to booting. During the post-booting period, the leaf inclination angle increased in Shanyou 63 and Liangyou Y06, but changed little in Liangyoupeijiu. At every growth stage of each variety, canopy leaf inclination angle distribution on the six heights of canopy layers was variable. As canopy height increased, the layered leaf area index (LAI) decreased in all the three plant types. However, while the leaf inclination angles showed little change in Liangyoupeijiu, they became larger in Shanyou 63 but smaller in Liangyou Y06. The simulation results used in the constructed model were very similar to the actual measurement values. The model provides a method for estimating canopy leaf inclination angle distribution in rice production.

  18. Fractal geometry for atmospheric correction and canopy simulation

    Science.gov (United States)

    Tornow, Carmen

    1996-06-01

    Global climate modeling needs a good parameterization of the vegetative surface. Two of the main important parameters are the leaf area index (LAI) and the fraction of absorbed photosynthetically active radiation (FPAR). In order to derive these values from space and airborne spectral radiance measurements one needs information on the actual atmospheric state as well as good canopy models. First we have developed a retrieval method for the optical depth to perform an atmospheric correction of remote sensing data. The atmospheric influence reduces the global image contrast and acts as a low pass filter. We found that the autocorrelation function [ACF(lambda )(h)] of the image depends on the global image contrast C and on the fractal dimension s. Using multiple regression the spectral optical depth in the visible range can be estimated from C and s with an absolute accuracy of 0.021. This method was applied and tested for a number of rural TM scenes. Atmospheric correction allows us to calculate the canopy reflectance from the image data. The relationships between the canopy reflectance and LAI or FPAR can be determined from canopy radiative transfer modeling. Row and shadowing effects influence the bi-directional reflectance distribution function (BRDF) since the leaves and stems are real 3D objects. In order to use a ray tracer for 3D radiative transfer simulation the canopy should be described by simple shapes (discs, cylinders) and polygones. Lindenmayer systems which are based on the ideas of fractal geometry allow the construction of plants and trees in this way. We have created simple artificial plants and arranged them into rows to study shadowing and row effects and compute the BRDF in various spectral channels.

  19. Radon 222 tracing of soil and forest canopy trace gas exchange in an open canopy boreal forest

    Science.gov (United States)

    Ussler, William, III; Chanton, Jeffrey P.; Kelley, Cheryl A.; Martens, Christopher S.

    1994-01-01

    A set of continuous, high-resolution atmospheric radon (Rn-222) concentration time series and radon soil flux measurements were acquired during the summer of 1990 at a micrometeorological tower site 13 km northwest of Schefferville, Quebec, Canada. The tower was located in a dry upland, open-canopy lichen-spruce woodland. For the period July 23 to August 1, 1990, the mean radon soil flux was 41.1 +/- 4.8 Bq m(exp -2)/h. Radon surface flux from the two end-member forest floor cover types (lichen mat and bare soil) were 38.8 +/- 5.1 and 61.8 +/- 15.6 Bq m(exp -2)/h, respectively. Average total forest canopy resistances computed using a simple 'flux box' model for radon exchange between the forest canopy and the overlying atmosphere range from 0.47 +/- 0.24 s cm(exp -1) to 2.65 +/- 1.61 cm(exp -1) for daytime hours (0900-1700 LT) and from 3.44 +/- 0.91 s cm(exp -1) to 10.55 +/- 7.16 s cm(exp -1) for nighttime hours (2000-0600) for the period July 23 to August 6, 1990. Continuous radon profiling of canopy atmospheres is a suitable approach for determining rates of biosphere/atmosphere trace gas exchange for remote field sites where daily equipment maintenance is not possible. where daily equipment maintenance is not possible.

  20. Flow Structure and Turbulence Characteristics downstream of a Spanwise Suspended Linear Canopy through Laboratory Experiments

    Science.gov (United States)

    Qiao, Jundong; Delavan, Sarah

    2014-11-01

    Laboratory experiments were conducted to explore the mean flow structure and turbulence properties downstream of a spanwise suspended linear canopy in a 2-D open channel flow using the Particle Tracking Velocimetry technique. This canopy simulated the effect of one long-line structure of a mussel farm. Four experimental scenarios with the approach velocities 50, 80, 110, and 140 mm s-1 were under investigation. Three sub-layers formed downstream of the canopy. An internal canopy layer, where the time-averaged velocity decreases linearly with increasing distance downstream, a canopy mixing layer increasing in vertical extent with increasing distance downstream of the canopy, and an external canopy layer with higher velocity under the canopy, which may bring nutrients from the local ambient environment into this layer. The canopy turbulence results in upward momentum transport downstream of the canopy within a distance of 0.60 of the canopy depth and downward momentum transport beyond 1.20 of it. In the scenarios with relatively lower approach velocities 50 and 80 mm s1 , the wake turbulence results in upward momentum transport. The broader goal of this study is to offer guidelines for the design and site selection of more productive mussel farms. The results suggest that distance interval between the parallel long-lines in a mussel farm should be less than 0.6 times the height of a long-line dropper. Also, potential farm locations that are characterized with current velocity from 50 to 80 mm s1 are suggested.

  1. Effects of canopy interception on energy conversion processes in a Chinese fir plantation ecosystem

    Institute of Scientific and Technical Information of China (English)

    Wenxing KANG; Xiangwen DENG; Zhonghui ZHAO

    2008-01-01

    The functions of canopy interception on energy conversion processes in a Chinese fir plantation ecosystem were studied with the aid of long-term obser-vation data in Huitong. The results showed that the absorbed, penetrated and reflected amounts of solar (reflection rate of 0.091) by the canopy. The conversion of net solar radiation to latent heat in the process of evap-oration from canopy interception amounted to ecosystem net radiation and 30.4% of ecosystem evapora-tion), which was an important part of the budget of the energy system. Canopy interception consumed kinetic energy of raindrops in overcoming resistance of branches and leaves, which collected raindrops, followed with the conversion of potential energy in raindrops to kinetic energy with falling raindrops. In general, the diameter of raindrops from the canopy is larger than that of the rain-drops above the canopy as a result of the collection effort by the canopy. The kinetic energy of raindrops from the canopy, therefore, was higher than that of raindrops in the atmosphere. The drop-size distribution from the canopy was affected by the structure of the canopy layer rather than the amount of precipitation and precipitation intens-ity. The canopy had no important nor efficient effects on decreasing the kinetic energy of raindrops in our case study with a first branch height of 7 m and precipitation amounts over 3 ram. However, the canopy would play a key role in decreasing kinetic energy of raindrops in two cases, that of a small amount of precipitation and one of heavy precipitation intensity, in which the canopy could intercept the largest amount of precipitation in the former condition and the canopy could scatter bigger raindrops to smaller raindrops with striking leaves in the case of heavy precipitation.

  2. A two-layer canopy with thermal inertia for an improved modelling of the sub-canopy snowpack energy-balance

    Directory of Open Access Journals (Sweden)

    I. Gouttevin

    2015-01-01

    Full Text Available A new, two-layer canopy module with thermal inertia as part of the detailed snow model SNOWPACK (version 3.2.1 is presented and evaluated. This module is designed to reproduce the difference in thermal response between leafy and woody canopy elements, and their impact on the underlying snowpack energy balance. Given the number of processes resolved, the SNOWPACK model with its enhanced canopy module constitutes a very advanced, physics-based atmosphere-to-soil-through-canopy-and-snow modelling chain. Comparisons of modelled sub-canopy thermal radiation to stand-scale observations at an Alpine site (Alptal, Switzerland demonstrate the improvements of the new canopy module. Both thermal heat mass and the two-layer canopy formulation contribute to reduce the daily amplitude of the modelled canopy temperature signal, in agreement with observations. Particularly striking is the attenuation of the night-time drop in canopy temperature, which was a key model bias. We specifically show that a single-layered canopy model is unable to produce this limited temperature drop correctly. The impact of the new parameterizations on the modelled dynamics of the sub-canopy snowpack is analysed and yields consistent results but the frequent occurrence of mixed-precipitation events at Alptal prevents a conclusive assessment of model performance against snow data. The new model is also successfully tested without specific tuning against measured tree temperatures and biomass heat storage fluxes at the boreal site of Norunda (Sweden. This provides an independent assessment of its physical consistency and stresses the robustness and transferability of the parameterizations used.

  3. Spectral-agronomic relationships of corn, soybean and wheat canopies

    Science.gov (United States)

    Bauer, M. E. (Principal Investigator); Daughtry, C. S. T.; Vanderbilt, V. C.

    1981-01-01

    During the past six years several thousand reflectance spectra of corn, soybean, and wheat canopies were acquired and analyzed. The relationships of biophysical variables, including leaf area index, percent soil cover, chlorophyll and water content, to the visible and infrared reflectance of canopies are described. The effects on reflectance of cultural, environmental, and stress factors such as planting data, seeding rate, row spacing, cultivar, soil type and nitrogen fertilization are also examined. The conclusions are that several key agronomic variables including leaf area index, development stage and degree of stress are strongly related to spectral reflectance and that it should be possible to estimate these descriptions of crop condition from satellite acquired multispectral data.

  4. Strengthening the Ubuntu social canopy after the Afrophobic attacks

    Directory of Open Access Journals (Sweden)

    Zorodzai Dube

    2016-03-01

    Full Text Available In view of the aftermath of the Afrophobic attacks in South Africa, this study regards Paul�s emphasis concerning common humanity and morality as a possible lacuna towards strengthening Ubuntu. Paul taught that both the Jews and the Gentiles have their common ancestor � Adam, and that good morality is a better identity marker than ethnicity. In view of the aftermath of the Afrophobic attacks in South Africa, this study suggests that similar arguments can be used to amend the Ubuntu social canopy.Intradisciplinary and/or interdisciplinary implications: This study is interdisciplinary in nature in that it uses perspectives from social sciences to seek solutions towards a more inclusive communityKeywords: Afrophobia; Xenophobia; Ubuntu; Social Canopy; Christ-like Anthropology

  5. Canopy Measurements with a Small Unmanned Aerial System

    Science.gov (United States)

    Peschel, J.

    2015-12-01

    This work discusses the use of a small unmanned aerial system (UAS) for the remote placement of wireless environmental sensors in tree canopies. Remote presence applications occur when one or more humans use a robot to project themselves into an environment in order to complete an inaccessible or time-critical mission. The more difficult problem of physical object manipulation goes one step further by incorporating physical-based interaction, in additional to visualization. Forested environments present especially unique challenges for small UAS versus similar domains (e.g., disaster response, inspection of critical infrastructure) due to the navigation and interaction required with dense tree canopies. This work describes two field investigations that inform: i) the type of physical object manipulation and visualization necessary for sensor placement (ventral, frontal, dorsal), ii) the necessary display form (hybrid) for piloting and sensor placement, and iii) visual feedback mechanisms useful for handling human-robot team role conflicts.

  6. Canopy Temperature as a Crop Water Stress Indicator

    Science.gov (United States)

    Jackson, R. D.; Idso, S. B.; Reginato, R. J.; Pinter, P. J., Jr.

    1981-08-01

    Canopy temperatures, obtained by infrared thermometry, along with wet- and dry-bulb air temperatures and an estimate of net radiation were used in equations derived from energy balance considerations to calculate a crop water stress index (CWSI). Theoretical limits were developed for the canopy air temperature difference as related to the air vapor pressure deficit. The CWSI was shown to be equal to 1 - E/Ep, the ratio of actual to potential evapotranspiration obtained from the Penman-Monteith equation. Four experimental plots, planted to wheat, received postemergence irrigations at different times to create different degrees of water stress. Pertinent variables were measured between 1340 and 1400 each day (except some weekends). The CWSI, plotted as a function of time, closely paralleled a plot of the extractable soil water in the 0- to 1.1-m zone. The usefulness and limitations of the index are discussed.

  7. Assessing aboveground tropical forest biomass using Google Earth canopy images.

    Science.gov (United States)

    Ploton, Pierre; Pélissier, Raphaël; Proisy, Christophe; Flavenot, Théo; Barbier, Nicolas; Rai, S N; Couteron, Pierre

    2012-04-01

    Reducing Emissions from Deforestation and Forest Degradation (REDD) in efforts to combat climate change requires participating countries to periodically assess their forest resources on a national scale. Such a process is particularly challenging in the tropics because of technical difficulties related to large aboveground forest biomass stocks, restricted availability of affordable, appropriate remote-sensing images, and a lack of accurate forest inventory data. In this paper, we apply the Fourier-based FOTO method of canopy texture analysis to Google Earth's very-high-resolution images of the wet evergreen forests in the Western Ghats of India in order to (1) assess the predictive power of the method on aboveground biomass of tropical forests, (2) test the merits of free Google Earth images relative to their native commercial IKONOS counterparts and (3) highlight further research needs for affordable, accurate regional aboveground biomass estimations. We used the FOTO method to ordinate Fourier spectra of 1436 square canopy images (125 x 125 m) with respect to a canopy grain texture gradient (i.e., a combination of size distribution and spatial pattern of tree crowns), benchmarked against virtual canopy scenes simulated from a set of known forest structure parameters and a 3-D light interception model. We then used 15 1-ha ground plots to demonstrate that both texture gradients provided by Google Earth and IKONOS images strongly correlated with field-observed stand structure parameters such as the density of large trees, total basal area, and aboveground biomass estimated from a regional allometric model. Our results highlight the great potential of the FOTO method applied to Google Earth data for biomass retrieval because the texture-biomass relationship is only subject to 15% relative error, on average, and does not show obvious saturation trends at large biomass values. We also provide the first reliable map of tropical forest aboveground biomass predicted

  8. Computing energy budget within a crop canopy from Penmann's formulae

    Indian Academy of Sciences (India)

    Mahendra Mohan; K K Srivastava

    2001-06-01

    The Lhomme's model (1988a), that extended Penmann's formulae to a multi-layer model, is rede-fined as a function of micrometeorological and physiological profiles of crop canopy. The sources and sinks of sensible and latent heat uxes are assumed to lie on a fictitious plane called zero-displacement plane. Algorithms are given to compute sensible and latent heat ux densities. Per-formance of the algorithms is compared with that of earlier algorithms.

  9. Estimates of forest canopy height and aboveground biomass using ICESat

    OpenAIRE

    Lefsky, Michael A; Harding, David J.; Keller, Michael; Cohen, Warren B.; Carabajal, Claudia C.; Espirito-Santo, Fernando Del Bom; Hunter, Maria O.; de Oliveira, Raimundo

    2005-01-01

    Exchange of carbon between forests and the atmosphere is a vital component of the global carbon cycle. Satellite laser altimetry has a unique capability for estimating forest canopy height, which has a direct and increasingly well understood relationship to aboveground carbon storage. While the Geoscience Laser Altimeter System (GLAS) onboard the Ice, Cloud and land Elevation Satellite (ICESat) has collected an unparalleled dataset of lidar waveforms over terrestrial targets, processing of IC...

  10. Study of momentum transfers within a vegetation canopy

    Indian Academy of Sciences (India)

    Mahendra Mohan; M K Tiwari

    2004-03-01

    Two models have been developed by applying conditions of continuity between the roughness sub- layer and the top of vegetation canopy having constant foliage distribution. Massman's cosh-type of wind profile and Albini's exponential wind profile have been used to derive expressions for shear stress, displacement height and roughness length in analytical forms. The computed results compared with those of Massman models (1987, 1997) show similarity with the present models.

  11. Canopy gap colonization in the Atlantic Montane Rain Forest

    OpenAIRE

    Renato A. Ferreira de Lima; Leila Cunha de Moura

    2006-01-01

    In the Atlantic Montane Rain Forest of South-eastern Brazil, a study was carried out to describe and evaluate canopy gap colonization. Gap composition by herb species was assessed through their soil coverage and woody species by measuring and identifying all individuals taller than one meter. Gap structure (gap size, number and diameter of treefalls), topographic position and surrounding vegetation were also measured. Two genera of Marantaceae were markedly frequent and abundant inside gaps. ...

  12. Modeling Biomass and Canopy Fuel Attributes Using LIDAR Technology

    OpenAIRE

    Mitchell, Brent

    2011-01-01

    Within the last decade LIDAR technology has been increasingly utilized as a tool for resource management by the U.S. Forest Service. The agency has been engaged in a wide variety of lidar projects and applications ranging from the development and exploration of basic LIDAR derivatives to pursuing advanced modeling of forest inventory parameters based on lidar canopy metrics. This presentation will provide an overview of how LIDAR technology can be used for modeling forest biomass and c...

  13. A Vegetated Urban Canopy Model for Meteorological and Environmental Modelling

    Science.gov (United States)

    Lee, Sang-Hyun; Park, Soon-Ung

    2008-01-01

    An urban canopy model is developed for use in mesoscale meteorological and environmental modelling. The urban geometry is composed of simple homogeneous buildings characterized by the canyon aspect ratio ( h/ w) as well as the canyon vegetation characterized by the leaf aspect ratio (σ l ) and leaf area density profile. Five energy exchanging surfaces (roof, wall, road, leaf, soil) are considered in the model, and energy conservation relations are applied to each component. In addition, the temperature and specific humidity of canopy air are predicted without the assumption of thermal equilibrium. For radiative transfer within the canyon, multiple reflections for shortwave radiation and one reflection for longwave radiation are considered, while the shadowing and absorption of radiation due to the canyon vegetation are computed by using the transmissivity and the leaf area density profile function. The model is evaluated using field measurements in Vancouver, British Columbia and Marseille, France. Results show that the model quite well simulates the observations of surface temperatures, canopy air temperature and specific humidity, momentum flux, net radiation, and energy partitioning into turbulent fluxes and storage heat flux. Sensitivity tests show that the canyon vegetation has a large influence not only on surface temperatures but also on the partitioning of sensible and latent heat fluxes. In addition, the surface energy balance can be affected by soil moisture content and leaf area index as well as the fraction of vegetation. These results suggest that a proper parameterization of the canyon vegetation is prerequisite for urban modelling.

  14. Canopy leaching of subtropical mixed forests under acid rain

    Institute of Scientific and Technical Information of China (English)

    Renjun XIANG; Liyuan CHAI; Xilin ZHANG; Gong ZHANG; Guifang ZHAO

    2008-01-01

    Leaching of major ions from acid precipitation in a subtropical forest was examined based on an experi-ment in four sample sites in Shaoshan City, Hunan Province, China, from January 2001 to June 2002. Results clearly show that when rain passed through the canopy, pH increased and the evidence of ion uptake was presented for SO42- , NO3-, Mg2+ and NH4+ ions, espe-cially of NH4+ and NO3-. The percentages of dissolved SO42-, Ca2+ and Mg2+ show a decreasing trend with increasing rainfall. Percentages of leaching Ca2+, K+ and Cl- ions show an increasing trend as a function of increased pH values. The forest canopy in Shaoshan City has a strong effect on the uptake of SO42- and NO3- ions under acid rain conditions. The decreasing order of ions leaching in the forest canopy is as follows: K+> Ca2+ > Cl- > Mg2+ > SO42- > NO3- > NH4+ > Na+.

  15. Effect of canopy manipulation on growth and yield of mangosteen

    Directory of Open Access Journals (Sweden)

    Sdoodee, S.

    2007-05-01

    Full Text Available A pruning trial was established to investigate the effect of canopy manipulation on growth and yield of mangosteen under field conditions at The-Pha research station, Songkhla province. Forty 7-year-oldmangosteen trees were used and the study designed as randomized complete blocks with 4 treatments in 10 replicates. The treatments were as follows: 1. control or no-pruning (T1, 2. cutting upper one along one sideof each tier of branches along the main stem (T2, 3. cutting one tier of branches with the upper tier along the main stem remaining (T3 and 4. top-cutting at 3-meter plant height (T4. It was found that 1 year afterpruning, the trees in T2 exhibited highest relative plant height and longest branch length after pruning (6.63m /4 month and 35.31 cm /4 month, respectively. First-year bearing was found only in T1 and T4, and the fruit yields in T1 and T4 were (3.13 and 2.31 kg/tree, respectively. It was remarkable that light transmissionthrough plant canopy in T4 gave the highest photosynthetically active radiation PAR (48.55%, but T1 the lowest PAR (2.46%. Thus, the plant growth in T4 was greater than in T1, and the mangosteen trees in T4also exhibited high root proliferation. From the result, it is suggested that canopy manipulation of T4 is anappropriate method.

  16. Ripe Fuji Apple Detection Model Analysis in Natural Tree Canopy

    Directory of Open Access Journals (Sweden)

    Dongjian He

    2012-11-01

    Full Text Available In this work we develop a novel approach for the automatic recognition of red Fuji apples within a tree canopy using three distinguishable color models in order to achieve automated harvesting. How to select the recognition model is important for the certain intelligent harvester employed to perform in real orchards. The L*a*b color model, HSI (Hue, Saturation and Intensity color model and LCD color difference model, which are insensitive to light conditions, are analyzed and applied to detect the fruit under the different lighting conditions because the fruit has the highest red color among the objects in the image. The fuzzy 2-partition entropy, which could discriminate the object and the background in grayscale images and is obtained from the histogram, is applied to the segment the Fuji apples under complex backgrounds. A series of mathematical morphological operations are used to eliminate segmental fragments after segmentation. Finally, the proposed approach is validated on apple images taken in natural tree canopies. A contribution reported in this work, is the voting scheme added to the natural tree canopy which recognizes apples under different light influences.

  17. The Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS): model description and application to a temperate deciduous forest canopy

    OpenAIRE

    R. D. Saylor

    2012-01-01

    Forest canopies are primary emission sources of biogenic volatile organic compounds (BVOCs) and have the potential to significantly influence the formation and distribution of secondary organic aerosol (SOA) mass. Biogenically-derived SOA formed as a result of emissions from the widespread forests across the globe may affect air quality in populated areas, degrade atmospheric visibility, and affect climate through direct and indirect forcings. In an effort to better understand the formati...

  18. Relationships Between the Distribution of Relative Canopy Light Intensity and the Peach Yield and Quality

    Institute of Scientific and Technical Information of China (English)

    HE Feng-li; WANG Fei; WEI Qin-ping; WANG Xiao-wei; ZHANG Qiang

    2008-01-01

    The aim of the present experiment was to study the relationship between the distribution of relative light intensity in canopy and yield and quality of Wanmi peach.The optimum relative canopy light intensity was judged to be 36.3% for high quality peaches,when canopy volumes of Wanmi peach trees with a relative light intensity<30%accounted for 7.7 and 47.9%of the total canopy volume in June and September,respectively.The canopy volume with a relative light intensity>80%was 27.7 and 3.1%of the total canopy volume in June and September.respectively.Peach canopies were divided into 0.5m×0.5m×0.5m cubes.with the relative light intensity being measured at different positions of the canopy during the growing season.Yield and fruit quality were also measured at these positions at harvest.The results showed that the relative light intensity decreased gradually from outside to inside and from top to bottom of the tree canopy.Fruit were mainly distributed in the upper and middle portions of the canopy,1.5-3.0m above ground. Regression results showed that single fruit weight and soluble solid content were positively related to relative light intensity.

  19. Canopy carbon budget of Siebold's beech (Fagus crenata) sapling under free air ozone exposure

    International Nuclear Information System (INIS)

    To determine the effects of ozone (O3) on the canopy carbon budget, we investigated photosynthesis and respiration of leaves of Siebold's beech saplings under free air O3 exposure (60 nmol mol−1, during daytime) in relation to the within-canopy light gradient; we then calculated the canopy-level photosynthetic carbon gain (PCG) and respiratory carbon loss (RCL) using a canopy photosynthesis model. Susceptibilities of photosynthesis and respiration to O3 were greater in leaves of upper canopy than in the lower canopy. The canopy net carbon gain (NCG) was reduced by O3 by 12.4% during one growing season. The increased RCL was the main factor for the O3-induced reduction in NCG in late summer, while contributions of the reduced PCG and the increased RCL to the NCG were almost the same in autumn. These results indicate contributions of changes in PCG and RCL under O3 to NCG were different between seasons. -- Highlights: • Upper canopy leaf of Siebold's beech is sensitive to ozone. • The net carbon gain of canopy was reduced by ozone. • Enhanced respiration by ozone highly contributes to net carbon gain in late summer. -- Contributions of ozone-induced reduction in photosynthesis and increase in respiration to canopy net carbon gain of beech sapling were different between seasons

  20. Use of spectral analogy to evaluate canopy reflectance sensitivity to leaf optical property

    Science.gov (United States)

    Baret, Frederic; Vanderbilt, Vern C.; Steven, Michael D.; Jacquemoud, Stephane

    1993-01-01

    The spectral variation of canopy reflectance is mostly governed by the absorption properties of the elements, hence the leaves, since their intrinsic scattering properties show very little spectral variation. The relationship between canopy reflectance and leaf reflectance measured at the red edge over sugar beet canopies was used to simulate canopy reflectance from leaf reflectance spectra measured over the whole spectral domain. The results show that the spectral analogies found allows accurate reconstruction of canopy reflectance spectra. Explicit assumptions about the very low spectral variation of leaf intrinsic scattering properties are thus indirectly justified. The sensitivity of canopy reflectance (rho(sub c)) to leaf optical properties can then be investigated from concurrent spectral variations of canopy (delta rho(sub c)/delta lambda) and leaf reflectance (delta rho(sub l)/delta lambda): (delta rho(sub c))/(delta rho(sub l)) = ((delta rho(sub c))/(delta lambda) ((delta rho( sub l))/(delta lambda))(sup -1)). This expression is strictly valid only when the optical properties of the soil background or the other vegetation elements such as bark are either spectrally flat or do not contribute significantly to canopy reflectance. Simulations using the SAIL and PROSPECT models demonstrate that the sensitivity of canopy reflectance to leaf reflectance is significant for large vegetation cover fractions in spectral domains where absorption is low. In these conditions, multiple, scattering enhances the leaf absorption features by a factor that can be greater than 2.0. To override the limitations of the SAIL model for the description of the canopy architecture, we tested the previous findings on experimental data. Concurrent canopy and leaf reflectance spectra were measured for a range of sugar beet canopies. The results show good agreement with the theoretical findings. Conclusions are drawn about the applicability of these findings, with particular attention to

  1. Relationships between MODIS black-sky shortwave albedo and airborne lidar based forest canopy structure

    Science.gov (United States)

    Korhonen, Lauri; Rautiainen, Miina; Arumäe, Tauri; Lang, Mait; Flewelling, James; Tokola, Timo; Stenberg, Pauline

    2016-04-01

    Albedo is one of the essential climate variables affecting the Earth's radiation balance. It is however not well understood how changes in forest canopy structure influence the albedo. Canopy structure can be mapped consistently for fairly large areas using airborne lidar sensors. Our objective was to study the relationships between MODIS shortwave black sky albedo product and lidar-based estimates of canopy structure in different biomes ranging from arctic to tropical. Our study is based on six structurally different forest sites located in Finland, Estonia, USA and Laos. Lidar-based mean height of the canopy, canopy cover and their transformations were used as predictor variables to describe the canopy structure. Tree species composition was also included for the three sites where it was available. We noticed that the variables predicting albedo best were different in open and closed canopy forests. In closed canopy forests, the species information was more important than canopy structure variables (R2=0.31-0.32) and using only structural variables resulted in poor R2 (0.13-0.15). If the 500 m MODIS pixel contained a mixture of forests and other land cover types, the albedo was strongly related to the forest area percent. In open canopy forests, structural variables such as canopy cover or height explained albedo well, but species information still improved the models (R2=0.27-0.52). We obtained the highest R2=0.52 using only structural variables in Laos on a partially degraded tropical forest with large variation in canopy cover. The different canopy structure variables were often correlated and the one that provided the best model changed from site to site.

  2. Canopy spectral invariants: A new concept in remote sensing of vegetation

    International Nuclear Information System (INIS)

    The concept of canopy spectral invariants expresses the observation that simple algebraic combinations of leaf and canopy spectral reflectances become wavelength independent and determine two canopy structure specific variables - the re-collision and escape probabilities. These variables specify an accurate relationship between the spectral response of a vegetation canopy to incident solar radiation at the leaf and the canopy scale. They are sensitive to important structural features of the canopy such as forest cover, tree density, leaf area index, crown geometry, forest type and stand age. We will discuss the theoretical basis of the concept and show how the spectral invariants are related to the maximum eigenvalue of the radiative transfer equation. (authors)

  3. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest.

    Energy Technology Data Exchange (ETDEWEB)

    Horn, Scott; Hanula, James L.; Ulyshen, Michael D.; Kilgo, John C.

    2005-01-01

    Horn, Scott, James L. Hanula, Michael D. Ulyshen, and John C. Kilgo. 2005. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest. Am. Midl. Nat. 153:321-326. Abstract: We found more green tree frogs (Hyla cinerea) in canopy gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopy gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat. Flies were the most commonly collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

  4. TREE CANOPY COVER MAPPING USING LiDAR IN URBAN BARANGAYS OF CEBU CITY, CENTRAL PHILIPPINES

    OpenAIRE

    Ejares, J. A.; Violanda, R. R.; Diola, A. G.; Dy, D. T.; Otadoy, J. B.; R. E. S. Otadoy

    2016-01-01

    This paper investigates tree canopy cover mapping of urban barangays (smallest administrative division in the Philippines) in Cebu City using LiDAR (Light Detection and Ranging). Object-Based Image Analysis (OBIA) was used to extract tree canopy cover. Multi-resolution segmentation and a series of assign-class algorithm in eCognition software was also performed to extract different land features. Contextual features of tree canopies such as height, area, roundness, slope, length-width and ell...

  5. Canopy and leaf gas exchange of Haloxylon ammodendron under different soil moisture regimes

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    In order to reveal the drought resistance and adaptation of the C4 desert plant Haloxylon ammodendron under artificially controlled soil moisture regimes,representative plants were selected to measure canopy photosynthesis using canopy photosynthetic measurement system.The results showed that appropriate soil moisture significantly enhances the canopy and leaf photosynthetic capacity,and extremely high soil moisture is not conducive to the photosynthesis of H.ammodendron.

  6. Characteristics of canopy and light transmittance in three types of apple orchards in Weibei areas of Shaanxi Province,China

    Institute of Scientific and Technical Information of China (English)

    Dengtao GAO; Mingyu HAN; Bingzhi LI; Linsen ZHANG; Ru BAI

    2008-01-01

    The effect of different modified tree shapes (MTS) on light reception was compared among three types of apple orchards: small-sized canopy, middle-sized canopy and large-sized canopy in Weibei areas of Shaanxi Province, China, by using WinsCanopy2004a (2002) for Hemispherical Image Analysis. The results showed that higher average values of photosynthetic photon flux density (PPFD) under canopy per day appeared in all tested orchards, and the number of branches per 667 m2 was lower, indicating that the modified tree shapes were effective to improve the light conditions of canopy but the pruning amount seemed to be slightly more than the appropriate level in Weibei areas. The middle-sized canopy had the maximal light penetration and the small-sized canopy had the least and the leaf area index (LAI) and the ratio of one year-old shoots to scaffold limbs were maximal in large-sized canopy orchards.

  7. Vertical stratification of beetles (Coleoptera) and flies (Diptera) in temperate forest canopies.

    Science.gov (United States)

    Maguire, Dorothy Y; Robert, Katleen; Brochu, Kristen; Larrivée, Maxim; Buddle, Christopher M; Wheeler, Terry A

    2014-02-01

    Forest canopies support high arthropod biodiversity, but in temperate canopies, little is known about the spatial distribution of these arthropods. This is an important first step toward understanding ecological roles of insects in temperate canopies. The objective of this study was to assess differences in the species composition of two dominant and diverse taxa (Diptera and Coleoptera) along a vertical gradient in temperate deciduous forest canopies. Five sugar maple trees from each of three deciduous forest sites in southern Quebec were sampled using a combination of window and trunk traps placed in three vertical strata (understory, mid-canopy, and upper-canopy) for three sampling periods throughout the summer. Coleoptera species richness and abundance did not differ between canopy heights, but more specimens and species of Diptera were collected in the upper-canopy. Community composition of Coleoptera and Diptera varied significantly by trap height. Window traps collected more specimens and species of Coleoptera than trunk traps, although both trap types should be used to maximize representation of the entire Coleoptera community. There were no differences in abundance, diversity, or composition of Diptera collected between trap types. Our data confirm the relevance of sampling all strata in a forest when studying canopy arthropod biodiversity. PMID:24472199

  8. Vertical stratification of beetles (Coleoptera) and flies (Diptera) in temperate forest canopies.

    Science.gov (United States)

    Maguire, Dorothy Y; Robert, Katleen; Brochu, Kristen; Larrivée, Maxim; Buddle, Christopher M; Wheeler, Terry A

    2014-02-01

    Forest canopies support high arthropod biodiversity, but in temperate canopies, little is known about the spatial distribution of these arthropods. This is an important first step toward understanding ecological roles of insects in temperate canopies. The objective of this study was to assess differences in the species composition of two dominant and diverse taxa (Diptera and Coleoptera) along a vertical gradient in temperate deciduous forest canopies. Five sugar maple trees from each of three deciduous forest sites in southern Quebec were sampled using a combination of window and trunk traps placed in three vertical strata (understory, mid-canopy, and upper-canopy) for three sampling periods throughout the summer. Coleoptera species richness and abundance did not differ between canopy heights, but more specimens and species of Diptera were collected in the upper-canopy. Community composition of Coleoptera and Diptera varied significantly by trap height. Window traps collected more specimens and species of Coleoptera than trunk traps, although both trap types should be used to maximize representation of the entire Coleoptera community. There were no differences in abundance, diversity, or composition of Diptera collected between trap types. Our data confirm the relevance of sampling all strata in a forest when studying canopy arthropod biodiversity.

  9. A revised terrain correction method for forest canopy height estimation using ICESat/GLAS data

    Science.gov (United States)

    Nie, Sheng; Wang, Cheng; Zeng, Hongcheng; Xi, Xiaohuan; Xia, Shaobo

    2015-10-01

    Although spaceborne Geoscience Laser Altimeter System (GLAS) can measure forest canopy height directly, the measurement accuracy is often affected by footprint size, shape and orientation, and terrain slope. Previous terrain correction methods only took into account the effect of terrain slope and footprint size when estimating forest canopy height. In this study, an improved terrain correction method was proposed to remove the effect of all aforementioned factors when estimating canopy height over sloped terrains. The revised method was found significantly better than the traditional ones according to the canopy height tested using small footprint LiDAR data in China. It reduced the RMSE of the canopy height estimates by up to 1.2 m. The effect of slope on canopy height estimation is almost eliminated by the proposed method since the slope had little correlation with the canopy heights estimated by revised method. When the footprint eccentricity is small, the canopy height error due to the footprint shape and orientation is small. However, when the footprint eccentricity is large enough, the height estimation error due to footprint shape and orientation is large. Therefore, it is necessary to take into account the influence of footprint shape and orientation on forest canopy estimation.

  10. Temporal Scales of the Nocturnal Flow Within and Above a Forest Canopy in Amazonia

    Science.gov (United States)

    Santos, Daniel M.; Acevedo, Otávio C.; Chamecki, Marcelo; Fuentes, José D.; Gerken, Tobias; Stoy, Paul C.

    2016-10-01

    Multiresolution decomposition is applied to 10 months of nocturnal turbulence observations taken at eight levels within and above a forest canopy in Central Amazonia. The aim is to identify the contributions of different temporal scales of the flow above and within the canopy. Results show that turbulence intensity in the lower canopy is mostly affected by the static stability in the upper canopy. Horizontal velocity fluctuations peak at time scales longer than 100 s within the canopy, which correspond to the scale of non-turbulent submeso motions above the canopy. In the vertical velocity spectrum near the surface, the peak occurs at time scales around 100 s, which are larger than the time scales of the turbulent flow above the canopy. Heat-flux cospectra within the canopy peak at the same temporal scales as the vertical velocity fluctuations at that level, suggesting the existence of buoyancy driven turbulence. Case studies are presented as evidence that low-frequency fluctuations propagate towards the canopy interior more easily than does turbulence.

  11. Validation of Canopy Height Profile methodology for small-footprint full-waveform airborne LiDAR data in a discontinuous canopy environment

    OpenAIRE

    Fieber, Karolina D.; Davenport, Ian J.; Tanase, Mihai A.; Ferryman, James M.; Gurney, Robert J.; Victor M. Becerra; Walker, Jeffrey P.; Hackerf, Jorg M.

    2015-01-01

    A Canopy Height Profile (CHP) procedure presented in Harding et al. (2001) for large footprint LiDAR data was tested in a closed canopy environment as a way of extracting vertical foliage profiles from LiDAR raw-waveform. In this study, an adaptation of this method to small-footprint data has been shown, tested and validated in an Australian sparse canopy forest at plot- and site-level. Further, the methodology itself has been enhanced by implementing a dataset-adjusted reflectance ratio calc...

  12. Modeling radiative transfer in tropical rainforest canopies: sensitivity of simulated albedo to canopy architectural and optical parameters

    Directory of Open Access Journals (Sweden)

    Sílvia N. M. Yanagi

    2011-12-01

    Full Text Available This study evaluates the sensitivity of the surface albedo simulated by the Integrated Biosphere Simulator (IBIS to a set of Amazonian tropical rainforest canopy architectural and optical parameters. The parameters tested in this study are the orientation and reflectance of the leaves of upper and lower canopies in the visible (VIS and near-infrared (NIR spectral bands. The results are evaluated against albedo measurements taken above the K34 site at the INPA (Instituto Nacional de Pesquisas da Amazônia Cuieiras Biological Reserve. The sensitivity analysis indicates a strong response to the upper canopy leaves orientation (x up and to the reflectivity in the near-infrared spectral band (rNIR,up, a smaller sensitivity to the reflectivity in the visible spectral band (rVIS,up and no sensitivity at all to the lower canopy parameters, which is consistent with the canopy structure. The combination of parameters that minimized the Root Mean Square Error and mean relative error are Xup = 0.86, rVIS,up = 0.062 and rNIR,up = 0.275. The parameterizations performed resulted in successful simulations of tropical rainforest albedo by IBIS, indicating its potential to simulate the canopy radiative transfer for narrow spectral bands and permitting close comparison with remote sensing products.Este estudo avalia a sensibilidade do albedo da superfície pelo Simulador Integrado da Biosfera (IBIS a um conjunto de parâmetros que representam algumas propriedades arquitetônicas e óticas do dossel da floresta tropical Amazônica. Os parâmetros testados neste estudo são a orientação e refletância das folhas do dossel superior e inferior nas bandas espectrais do visível (VIS e infravermelho próximo (NIR. Os resultados são avaliados contra observações feitas no sítio K34 pertencente ao Instituto Nacional de Pesquisas da Amazônia (INPA na Reserva Biológica de Cuieiras. A análise de sensibilidade indica uma forte resposta aos parâmetros de orienta

  13. [Study on spectral reflectance characteristics of hemp canopies].

    Science.gov (United States)

    Tian, Yi-Chen; Jia, Kun; Wu, Bing-Fang; Li, Qiang-Zi

    2010-12-01

    Hemp (Cannabis sativa L.) is a special economic crop and widely used in many field. It is significative for the government to master the information about planting acreage and spatial distribution of hemp for hemp industrial policy decision in China. Remote sensing offers a potential way of monitoring large area for the cultivation of hemp. However, very little study on the spectral properties of hemp is available in the scientific literature. In the present study, the spectral reflectance characteristics of hemp canopy were systematically analyzed based on the spectral data acquired with ASD FieldSpec portable spectrometer. The wavebands and its spectral resolution for discriminating hemp from other plants were identified using difference analysis. The major differences in canopy reflectance of hemp and other plants were observed near 530, 552, 734, 992, 1 213, 1 580 and 2 199 nm, and the maximal difference is near 734 nm. The spectral resolution should be 30 nm or less in visible and near infrared regions, and 50 nm or less in middle infrared regions.

  14. Realistic Representation of Trees in an Urban Canopy Model

    Science.gov (United States)

    Ryu, Young-Hee; Bou-Zeid, Elie; Wang, Zhi-Hua; Smith, James A.

    2016-05-01

    A single-layer urban canopy model that captures sub-facet heterogeneity and various hydrological processes is further developed to explicitly incorporate trees within the urban canyon. The physical processes associated with trees are shortwave/longwave radiation exchange, including mutual interception and shading by trees and buildings and multiple reflections, sensible heat and latent heat (through transpiration) exchange, and root water uptake. A computationally-efficient geometric approach is applied to the radiation exchanges, requiring a priori knowledge of view factors. These view factors are first obtained from independent Monte Carlo ray-tracing simulations, and subsequently simple relations, which are functions of canyon aspect ratio and tree-crown ratio, are proposed to estimate them. The developed model is evaluated against field observations at two urban sites and one suburban site, showing improved performance for latent heat flux compared to the previous version that only includes ground vegetation. The trees in the urban canopy act to considerably decrease sensible heat flux and increase latent heat flux, and these effects are found to be more significant in the more dense urban site. Sensitivity tests are then performed to examine the effects of tree geometry relative to canyon geometry. The results indicate that the tree-crown size relative to canyon width is the most influential parameter to decrease sensible heat flux and increase latent heat flux, resulting in cooling of the urban area.

  15. A coupled energy transport and hydrological model for urban canopies

    Science.gov (United States)

    Wang, Z.; Bou-Zeid, E.; Smith, J. A.

    2011-12-01

    Urban land-atmosphere interaction has been attracting more research efforts in order to understand the complex physics of flow and mass and heat transport in urban surfaces and the lower urban atmosphere. In this work, we developed and implemented a new physically-based single-layer urban canopy model, coupling the surface exchange of energy and the subsurface transport of water/soil moisture. The new model incorporates sub-facet heterogeneity for each urban surface (roof, wall or ground). This better simulates the energy transport in urban canopy layers, especially over low-intensity built (suburban type) terrains that include a significant fraction of vegetated surfaces. We implemented detailed urban hydrological models for both natural terrains (bare soil and vegetation) and porous engineered materials with water-holding capacity (concrete, gravel, etc). The skill of the new scheme was tested against experimental data collected through a wireless sensor network deployed over the campus of Princeton University. The model performance was found to be robust and insensitive to changes in weather conditions or seasonal variability. Predictions of the volumetric soil water content were also in good agreement with field measurements, highlighting the model capability of capturing subsurface water transport for urban lawns. The new model was also applied to a case study assessing different strategies, i.e. white versus green roofs, in the mitigation of urban heat island effect.

  16. Phylogenetic Structure of Foliar Spectral Traits in Tropical Forest Canopies

    Directory of Open Access Journals (Sweden)

    Kelly M. McManus

    2016-02-01

    Full Text Available The Spectranomics approach to tropical forest remote sensing has established a link between foliar reflectance spectra and the phylogenetic composition of tropical canopy tree communities vis-à-vis the taxonomic organization of biochemical trait variation. However, a direct relationship between phylogenetic affiliation and foliar reflectance spectra of species has not been established. We sought to develop this relationship by quantifying the extent to which underlying patterns of phylogenetic structure drive interspecific variation among foliar reflectance spectra within three Neotropical canopy tree communities with varying levels of soil fertility. We interpreted the resulting spectral patterns of phylogenetic signal in the context of foliar biochemical traits that may contribute to the spectral-phylogenetic link. We utilized a multi-model ensemble to elucidate trait-spectral relationships, and quantified phylogenetic signal for spectral wavelengths and traits using Pagel’s lambda statistic. Foliar reflectance spectra showed evidence of phylogenetic influence primarily within the visible and shortwave infrared spectral regions. These regions were also selected by the multi-model ensemble as those most important to the quantitative prediction of several foliar biochemical traits. Patterns of phylogenetic organization of spectra and traits varied across sites and with soil fertility, indicative of the complex interactions between the environmental and phylogenetic controls underlying patterns of biodiversity.

  17. Bidirectional reflectance modeling of non-homogeneous plant canopies

    Science.gov (United States)

    Norman, John M.

    1986-01-01

    The objective of this research is to develop a 3-dimensional radiative transfer model for predicting the bidirectional reflectance distribution function (BRDF) for heterogeneous vegetation canopies. Leaf bidirectional reflectance and transmittance distribution functions were measured for corn and soybean leaves. The measurements clearly show that leaves are complex scatterers and considerable specular reflectance is possible. Because of the character of leaf reflectance, true leaf reflectance is larger than the nadir reflectances that are normally used to represent leaves. A 3-dimensional reflectance model, named BIGAR (Bidirectional General Array Model), was developed and compared with measurements from corn and soybean. The model is based on the concept that heterogeneous canopies can be described by a combination of many subcanopies, which contain all the foliage, and these subcanopy envelopes can be characterized by ellipsoids of various sizes and shapes. The model/measurement comparison results indicate that this relatively simple model captures the essential character of row crop BRDF's. Finally, two soil BDRF models were developed: one represents soil particles as rectangular blocks and the other represents soil particles as spheres. The sphere model was found to be superior.

  18. Overview of an Urban Canopy Parameterization in COAMPS

    Energy Technology Data Exchange (ETDEWEB)

    Leach, M J; Chin, H S

    2006-02-09

    The Coupled Atmosphere/Ocean Mesoscale Prediction System (COAMPS) model (Hodur, 1997) was developed at the Naval Research Laboratory. COAMPS has been used at resolutions as small as 2 km to study the role of complex topography in generating mesoscale circulation (Doyle, 1997). The model has been adapted for use in the Atmospheric Science Division at LLNL for both research and operational use. The model is a fully, non-hydrostatic model with several options for turbulence parameterization, cloud processes and radiative transfer. We have recently modified the COAMPS code to include building and other urban surfaces effects in the mesoscale model by incorporating an urban canopy parameterization (UCP) (Chin et al., 2005). This UCP is a modification of the original parameterization of (Brown and Williams, 1998), based on Yamada's (1982) forest canopy parameterization and includes modification of the TKE and mean momentum equations, modification of radiative transfer, and an anthropogenic heat source. COAMPS is parallelized for both shared memory (OpenMP) and distributed memory (MPI) architecture.

  19. Thermal Imaging of Forest Canopy Temperatures: Relationships with Biological and Biophysical Drivers and Ecosystem Fluxes

    Science.gov (United States)

    Still, C. J.; Kim, Y.; Hanson, C. V.; Law, B. E.; Kwon, H.; Schulze, M.; Pau, S.; Detto, M.

    2015-12-01

    Temperature is a primary environmental control on plant processes at a range of spatial and temporal scales, affecting enzymatic reactions, ecosystem biogeochemistry, and species distributions. Although most focus is on air temperature, the radiative or skin temperature of plants is more relevant. Canopy skin temperature dynamics reflect biophysical, physiological, and anatomical characteristics and interactions with environmental drivers, and can be used to examine forest responses to stresses like droughts and heat waves. Direct measurements of plant canopy temperatures using thermocouple sensors have been challenging and offer limited information. Such measurements are usually conducted over short periods of time and a limited spatial extent of the canopy. By contrast, thermal infrared (TIR) imaging allows for extensive temporal and spatial measurement of canopy temperature regimes. We present results of TIR imaging of forest canopies at a range of well-studied forest sites in the United States and Panama. These forest types include temperate rainforests, a semi­arid pine forest, and a semi­deciduous tropical forest. Canopy temperature regimes at these sites are highly variable spatially and temporally and display frequent departures from air temperature, particularly during clear sky conditions. Canopy tissue temperatures are often warmer (daytime) and colder (nighttime) than air temperature, and canopy structure seems to have a large influence on the thermal regime. Additionally, comparison of canopy temperatures to eddy covariance fluxes of carbon dioxide, water vapor, and energy reveals relationships not apparent using air temperature. Initial comparisons between our forest canopy temperatures and remotely sensed skin temperature using Landsat and MODIS data show reasonably good agreement. We conclude that temporal and spatial changes in canopy temperature and its relationship to biological and environmental factors can improve our understanding of how

  20. Weak Environmental Controls of Tropical Forest Canopy Height in the Guiana Shield

    Directory of Open Access Journals (Sweden)

    Youven Goulamoussène

    2016-09-01

    Full Text Available Canopy height is a key variable in tropical forest functioning and for regional carbon inventories. We investigate the spatial structure of the canopy height of a tropical forest, its relationship with environmental physical covariates, and the implication for tropical forest height variation mapping. Making use of high-resolution maps of LiDAR-derived Digital Canopy Model (DCM and environmental covariates from a Digital Elevation Model (DEM acquired over 30,000 ha of tropical forest in French Guiana, we first show that forest canopy height is spatially correlated up to 2500 m. Forest canopy height is significantly associated with environmental variables, but the degree of correlation varies strongly with pixel resolution. On the whole, bottomland forests generally have lower canopy heights than hillslope or hilltop forests. However, this global picture is very noisy at local scale likely because of the endogenous gap-phase forest dynamic processes. Forest canopy height has been predictively mapped across a pixel resolution going from 6 m to 384 m mimicking a low resolution case of 3 points·km − 2 . Results of canopy height mapping indicated that the error for spatial model with environment effects decrease from 8.7 m to 0.91 m, depending of the pixel resolution. Results suggest that, outside the calibration plots, the contribution of environment in shaping the global canopy height distribution is quite limited. This prevents accurate canopy height mapping based only on environmental information, and suggests that precise canopy height maps, for local management purposes, can only be obtained with direct LiDAR monitoring.

  1. Analyzing transient closed chamber effects on canopy gas exchange for optimizing flux calculation timing

    NARCIS (Netherlands)

    Langensiepen, M.; Kupisch, M.; Wijk, van M.T.; Ewert, F.

    2012-01-01

    Transient type canopy chambers are still the only currently available practical solution for rapid screening of gas-exchange in agricultural fields. The technique has been criticized for its effect on canopy microclimate during measurement which affects the transport regime and regulation of plant g

  2. Towards Automated Characterization of Canopy Layering in Mixed Temperate Forests Using Airborne Laser Scanning

    Directory of Open Access Journals (Sweden)

    Reik Leiterer

    2015-11-01

    Full Text Available Canopy layers form essential structural components, affecting stand productivity and wildlife habitats. Airborne laser scanning (ALS provides horizontal and vertical information on canopy structure simultaneously. Existing approaches to assess canopy layering often require prior information about stand characteristics or rely on pre-defined height thresholds. We developed a multi-scale method using ALS data with point densities >10 pts/m2 to determine the number and vertical extent of canopy layers (canopylayer, canopylength, seasonal variations in the topmost canopy layer (canopytype, as well as small-scale heterogeneities in the canopy (canopyheterogeneity. We first tested and developed the method on a small forest patch (800 ha and afterwards tested transferability and robustness of the method on a larger patch (180,000 ha. We validated the approach using an extensive set of ground data, achieving overall accuracies >77% for canopytype and canopyheterogeneity, and >62% for canopylayer and canopylength. We conclude that our method provides a robust characterization of canopy layering supporting automated canopy structure monitoring.

  3. Integrating soil information into canopy sensor algorithms for improved corn nitrogen rate recommendation

    Science.gov (United States)

    Crop canopy sensors have proven effective at determining site-specific nitrogen (N) needs, but several Midwest states use different algorithms to predict site-specific N need. The objective of this research was to determine if soil information can be used to improve the Missouri canopy sensor algori...

  4. Leaf-on canopy closure in broadleaf deciduous forests predicted during winter

    Science.gov (United States)

    Twedt, Daniel J.; Ayala, Andrea J.; Shickel, Madeline R.

    2015-01-01

    Forest canopy influences light transmittance, which in turn affects tree regeneration and survival, thereby having an impact on forest composition and habitat conditions for wildlife. Because leaf area is the primary impediment to light penetration, quantitative estimates of canopy closure are normally made during summer. Studies of forest structure and wildlife habitat that occur during winter, when deciduous trees have shed their leaves, may inaccurately estimate canopy closure. We estimated percent canopy closure during both summer (leaf-on) and winter (leaf-off) in broadleaf deciduous forests in Mississippi and Louisiana using gap light analysis of hemispherical photographs that were obtained during repeat visits to the same locations within bottomland and mesic upland hardwood forests and hardwood plantation forests. We used mixed-model linear regression to predict leaf-on canopy closure from measurements of leaf-off canopy closure, basal area, stem density, and tree height. Competing predictive models all included leaf-off canopy closure (relative importance = 0.93), whereas basal area and stem density, more traditional predictors of canopy closure, had relative model importance of ≤ 0.51.

  5. [Estimation of forest canopy chlorophyll content based on PROSPECT and SAIL models].

    Science.gov (United States)

    Yang, Xi-guang; Fan, Wen-yi; Yu, Ying

    2010-11-01

    The forest canopy chlorophyll content directly reflects the health and stress of forest. The accurate estimation of the forest canopy chlorophyll content is a significant foundation for researching forest ecosystem cycle models. In the present paper, the inversion of the forest canopy chlorophyll content was based on PROSPECT and SAIL models from the physical mechanism angle. First, leaf spectrum and canopy spectrum were simulated by PROSPECT and SAIL models respectively. And leaf chlorophyll content look-up-table was established for leaf chlorophyll content retrieval. Then leaf chlorophyll content was converted into canopy chlorophyll content by Leaf Area Index (LAD). Finally, canopy chlorophyll content was estimated from Hyperion image. The results indicated that the main effect bands of chlorophyll content were 400-900 nm, the simulation of leaf and canopy spectrum by PROSPECT and SAIL models fit better with the measured spectrum with 7.06% and 16.49% relative error respectively, the RMSE of LAI inversion was 0. 542 6 and the forest canopy chlorophyll content was estimated better by PROSPECT and SAIL models with precision = 77.02%.

  6. Regeneration in canopy gaps of tierra-firme forest in the Peruvian Amazon

    DEFF Research Database (Denmark)

    Karsten, Rune Juelsborg; Jovanovic, Milos; Meilby, Henrik;

    2013-01-01

    the regeneration dynamics of logging gaps with naturally occuring canopy gaps. In the concession of Consorcio Forestal Amazonico in the region of Ucayali in the Peruvian Amazon, a total of 210 circular sample plots were established in 35 gaps in unmanaged natural forest and 35 canopy gaps in forest managed...

  7. Modeling photosynthesis of discontinuous plant canopies by linking Geometric Optical Radiative Transfer model with biochemical processes

    Science.gov (United States)

    Xin, Q.; Gong, P.; Li, W.

    2015-02-01

    Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily time scales. We also demonstrate that the ambient CO2 concentration influences daytime vegetation photosynthesis, which needs to be considered in state-of-the-art biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  8. An experimental study of momentum and heavy particle transport in a trellised agricultural canopy

    Science.gov (United States)

    Although considerable research has been done on turbulent particle dispersion, little of that work has focused on dispersal patterns near the source or in trellised plant canopies. To study the dispersion characteristics of particles in such canopies, a series of particle release events was performe...

  9. Ground-Based Robotic Sensing of an Agricultural Sub-Canopy Environment

    Science.gov (United States)

    Burns, A.; Peschel, J.

    2015-12-01

    Airborne remote sensing is a useful method for measuring agricultural crop parameters over large areas; however, the approach becomes limited to above-canopy characterization as a crop matures due to reduced visual access of the sub-canopy environment. During the growth cycle of an agricultural crop, such as soybeans, the micrometeorology of the sub-canopy environment can significantly impact pod development and reduced yields may result. Larger-scale environmental conditions aside, the physical structure and configuration of the sub-canopy matrix will logically influence local climate conditions for a single plant; understanding the state and development of the sub-canopy could inform crop models and improve best practices but there are currently no low-cost methods to quantify the sub-canopy environment at a high spatial and temporal resolution over an entire growth cycle. This work describes the modification of a small tactical and semi-autonomous, ground-based robotic platform with sensors capable of mapping the physical structure of an agricultural row crop sub-canopy; a soybean crop is used as a case study. Point cloud data representing the sub-canopy structure are stored in LAS format and can be used for modeling and visualization in standard GIS software packages.

  10. Automated detection of branch dimensions in woody skeletons of leafless fruit tree canopies

    NARCIS (Netherlands)

    Bucksch, A.; Fleck, S.

    2009-01-01

    Light driven physiological processes of tree canopies need to be modelled based on detailed 3Dcanopy structure – we explore the possibilities offered by terrestrial LIDAR to automatically represent woody skeletons of leafless trees as a basis for adequate models of canopy structure. The automatic ev

  11. Directed manipulation of crop water status through canopy temperature-based irrigation management

    Science.gov (United States)

    While the relationship between canopy temperature and plant water status is well established, canopy temperature as a means of controlling crop irrigation has been limited in production applications due to the cost and complexity of temperature monitoring. A new low-cost infrared thermometry system...

  12. Employing lidar to detail vegetation canopy architecture for prediction of aeolian transport

    Science.gov (United States)

    Sankey, Joel B.; Law, Darin J.; Breshears, David D.; Munson, Seth M.; Webb, Robert H.

    2013-01-01

    The diverse and fundamental effects that aeolian processes have on the biosphere and geosphere are commonly generated by horizontal sediment transport at the land surface. However, predicting horizontal sediment transport depends on vegetation architecture, which is difficult to quantify in a rapid but accurate manner. We demonstrate an approach to measure vegetation canopy architecture at high resolution using lidar along a gradient of dryland sites ranging from 2% to 73% woody plant canopy cover. Lidar-derived canopy height, distance (gaps) between vegetation elements (e.g., trunks, limbs, leaves), and the distribution of gaps scaled by vegetation height were correlated with canopy cover and highlight potentially improved horizontal dust flux estimation than with cover alone. Employing lidar to estimate detailed vegetation canopy architecture offers promise for improved predictions of horizontal sediment transport across heterogeneous plant assemblages.

  13. A comparative analysis of simulated and observed photosynthetic CO2 uptake in two coniferous forest canopies

    DEFF Research Database (Denmark)

    Ibrom, A.; Jarvis, P.G.; Clement, R.;

    2006-01-01

    Gross canopy photosynthesis (Pg) can be simulated with canopy models or retrieved from turbulent carbon dioxide (CO2) flux measurements above the forest canopy. We compare the two estimates and illustrate our findings with two case studies. We used the three-dimensional canopy model MAESTRA...... to simulate Pg of two spruce forests differing in age and structure. Model parameter acquisition and model sensitivity to selected model parameters are described, and modeled results are compared with independent flux estimates. Despite higher photon fluxes at the site, an older German Norway spruce (Picea...... uptake rates were a slightly smaller quantum yield and lower absorptance of the Norway spruce stand because of a more clumped canopy structure. The model did not represent the scatter in the turbulent CO2 flux densities, which was of the same order of magnitude as the non...

  14. Attributes for NHDPlus Catchments (Version 1.1) for the Conterminous United States: NLCD 2001 Tree Canopy

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data set represents the mean percentage of tree canopy from the Canopy Layer of the National Land Cover Dataset 2001, (LaMotte and Wieczorek, 2010), compiled...

  15. Waveform- and Terrestrial Lidar Assessment of the Usual (Structural) Suspects in a Forest Canopy

    Science.gov (United States)

    van Aardt, J. A.; Romanczyk, P.; Kelbe, D.; van Leeuwen, M.; Cawse-Nicholson, K.; Gough, C. M.; Kampe, T. U.

    2015-12-01

    Forest inventory has evolved from standard stem diameter-height relationships, to coarse canopy metrics, to more involved ecologically-meaningful variables, such as leaf area index (LAI) and even canopy radiative transfer as a function of canopy gaps, leaf clumping, and leaf angle distributions. Accurate and precise measurement of the latter set of variables presents a challenge to the ecological and modeling communities; however, relatively novel remote sensing modalities, e.g., waveform lidar (wlidar) and terrestrial lidar systems (TLS), have the potential to adress this challenge. Research teams at Rochester Institute of Technology (RIT) and the Virginia Commonwealth University (VCU) have been collaborating with the National Ecological Observation Network (NEON) to assess vegetation canopy structure and variation at the University of Michigan Biological Research Station and the NEON Northeast domain (Harvard Forest, MA). Airborne small-footprint wlidar data, in-situ TLS data, and first-principles, physics-based simulation tools are being used to study (i) the impact of vegetation canopy geometric elements on wlidar signals (twigs and petioles have been deemed negligible), (ii) the analysis of airborne wlidar data for top-down assessment of canopy metrics such as LAI, and (iii) our ability to extract "bottom-up" canopy structure from TLS using scans registered to each other using a novel marker-free registration approach (e.g., basal area: R2=0.82, RMSE=7.43 m2/ha). Such studies indicate that we can potentially assess radiative transfer through vegetation canopies remotely using a vertically-stratified approach with wlidar, and augment such an approach via rapid-scan TLS technology to gain a better understanding of fine-scale variation in canopy structure. This in turn is key to quantifying and modeling radiative transfer based on understanding of forest canopy structural change as a function of ecosystem development, climate, and anthropogenic drivers.

  16. Photon recollision probability in heterogeneous forest canopies: Compatibility with a hybrid GO model

    Science.gov (United States)

    Mõttus, Matti; Stenberg, Pauline; Rautiainen, Miina

    2007-02-01

    Photon recollision probability, or the probability by which a photon scattered from a phytoelement in the canopy will interact within the canopy again, has previously been shown to approximate well the fractions of radiation scattered and absorbed by homogeneous plant covers. To test the applicability of the recollision probability theory to more complicated canopy structures, a set of modeled stands was generated using allometric relations for Scots pine trees growing in central Finland. A hybrid geometric-optical model (FRT, or the Kuusk-Nilson model) was used to simulate the reflectance and transmittance of the modeled forests consisting of ellipsoidal tree crowns and, on the basis of the simulations, the recollision probability (p) was calculated for the canopies. As the recollision probability theory assumes energy conservation, a method to check and ensure energy conservation in the model was first developed. The method enabled matching the geometric-optical and two-stream submodels of the hybrid FRT model, and more importantly, allowed calculation of the recollision probability from model output. Next, to assess the effect of canopy structure on the recollision probability, the obtained p-values were compared to those calculated for structureless (homogeneous) canopies with similar effective LAI using a simple two-stream radiation transfer model. Canopy structure was shown to increase the recollision probability, implying that structured canopies absorb more efficiently the radiation interacting with the canopy, and it also changed the escape probabilities for different scattering orders. Most importantly, the study demonstrated that the concept of recollision probability is coherent with physically based canopy reflectance models which use the classical radiative transfer theory. Furthermore, it was shown that as a first approximation, the recollision probability can be considered to be independent of wavelength. Finally, different algorithms for

  17. A Comparison of Two Canopy Radiative Models in Land Surface Processes

    Institute of Scientific and Technical Information of China (English)

    DAI Qiudan; SUN Shufen

    2007-01-01

    This paper compares the predictions by two radiative transfer models-the two-stream approximation model and the generalized layered model (developed by the authors) in land surface processes-for different canopies under direct or diffuse radiation conditions. The comparison indicates that there are significant differences between the two models, especially in the near infrared (NIR) band. Results of canopy reflectance from the two-stream model are larger than those from the generalized model. However, results of canopy absorptance from the two-stream model are larger in some cases and smaller in others compared to those from the generalized model, depending on the cases involved. In the visible (VIS) band, canopy reflectance is smaller and canopy absorptance larger from the two-stream model compared to the generalized model when the Leaf Area Index (LAI) is low and soil reflectance is high. In cases of canopies with vertical leaf angles, the differences of reflectance and absorptance in the VIS and NIR bands between the two models are especially large.Two commonly occurring cases, with which the two-stream model cannot deal accurately, are also investigated. One is for a canopy with different adaxial and abaxial leaf optical properties; and the other is for incident sky diffuse radiation with a non-uniform distribution. Comparison of the generalized model within the same canopy for both uniform and non-uniform incident diffuse radiation inputs shows smaller differences in general. However, there is a measurable difference between these radiation inputs for a canopy with high leaf angle. This indicates that the application of the two-stream model to a canopy with different adaxial and abaxial leaf optical properties will introduce non-negligible errors.

  18. Device for netting a flexible canopy made from metallic strips

    Energy Technology Data Exchange (ETDEWEB)

    Tretiakov, G.I.; Aksanov, Sh.I.; Bodendorf, B.A.; Kirilin, V.S.

    1981-03-23

    The invention pertains to ways of erecting a flexible canopy when finishing off thick, steep coal seams using an underground method. The device has a frame with brackets, and holders for arranging metallic strips. The holders are placed on shafts and divided into two groups. Each of these groups has levers and hydraulic cylinders which guide the holders, and also has a netting broach with a guide to stretch out the cross-strips. To lessen the overall dimensions and simplify construction, the holders are set in a frame on one kinematic axis so they can turn and are furnished with leads with rollers. The levers are set on one axis which is made of inner and outer pipes set in the brackets of the frame. The levers of one group of holders are fastened on the inner pipe, while the levers of the other are fastened on the outer pipe.

  19. Canopy Level Chlorophyll Fluorescence and the PRI in a Cornfield

    Science.gov (United States)

    Middleton, Elizabeth M.; Cheng, Yen-Ben; Corp, Lawrence A.; Campbell, Petya K. E.; Huemmrich, K. Fred; Zhang, Qingyuan; Kustas, William P.

    2012-01-01

    Two bio-indicators, the Photochemical Reflectance Index (PRI) and solar-induced red and far-red Chlorophyll Fluorescence (SIF), were derived from directional hyperspectral observations and studied in a cornfield on two contrasting days in the growing season. Both red and far-red SIF exhibited higher values on the day when the canopy in the early senescent stage, but only the far-red SIF showed sensitivity to viewing geometry. Consequently, the red/far-red SIF ratio varied greatly among azimuth positions while the largest values were obtained for the "hotspot" at both growth stages. This ratio was lower (approx.0.88 +/- 0.4) in early July than in August when the ratio approached equivalence (near approx.1). In concert, the PRI exhibited stronger responses to both zenith and azimuth angles and different values on the two growth stages. The potential of using these indices to monitor photosynthetic activities needs further investigation

  20. Canopy resistance modelling for crops in contrasting water conditions

    Science.gov (United States)

    Rana, G.; Katerji, N.; Mastrorilli, M.

    Although canopy resistance to vapour water transport (r c) depends on climatic conditions and crop water status, standard constant daily values are usually used. Thus models using r c to predict evapotranspiration (ET) fail if applied to water stressed crops. On the other hand, in the scientific literature it is possible to find daily r c models dependent on soil moisture, but, in such cases, these need to be calibrated for each crop and site. Here a “climatic resistance” (r∗) is introduced as function of available energy, vapour pressure deficit and air temperature. Therefore a model of canopy resistance is presented on a hourly and daily time scale, where r c is expressed as function of r∗, aerodynamic resistance, r a, and predawn leaf water potential (PLWP), independently on the soil type. The model has been tested in Southern Italy on grass (reference crop), sorghum, sunflower and soybean and validated in France on soybean, without further calibration. The field crops were submitted to several water stress cycles: PLWP ranged between -0.1 and -1.2 MPa. The experiments showed that this model works well both under and without soil water constraints. On an hourly scale calculated ET in function of PLWP always presented a small underestimation (maximum 6% for soybean in Italy under senescence and water stress); on a daily scale these underestimations are reduced in general. The model test showed that it is independent of the site but depends only on the crop species. On a daily scale the model is presented also with available water (AW) as input, but in this case it needs local calibration. When AW is used as input the model showed an underestimation of 5% and 7% for sorghum and sunflower respectively.

  1. Identification of Wheat Canopy Structure Using Hyperspectral Data

    Institute of Scientific and Technical Information of China (English)

    LU Yan-li; WANG Ji-hua; LI Shao-kun; XIE Rui-zhi; GAO Shi-ju; MA Da-ling

    2005-01-01

    Some winter wheat varieties were selected in this experiment. The results were as follows: 1) Leaf orientation value (LOV) and leaf area index (LAI) of wheat had different contributions to canopy spectral reflectance (CSR). For example, LOV affected greatly canopy spectra more than LAI did in jointing stage, but LAI had a greater effect on CSR than LOV did after the ground was near to be covered completely. 2) Twenty treatments including different varieties and densities were arranged in this experiment, and the result of cluster analysis showed that all these treatments can be parted into four clusters according to LAI and LOV: varieties with erect leaves and low LAI (denoted as A), varieties with erect leaves and high LAI (denoted as B), varieties with horizontal leaves and low LAI (denoted as C), varieties with horizontal leaves and high LAI (denoted as D). Their CSR had difference in 400-700 nm and 700-1 150 nm at jointing stage, especially in different plant types. 3) There was obvious distribution difference among different clusters in scatter plot (X=ΔR890, Y=R890),ΔR890 was the reflectance increment from jointing to booting stage. It was seen from the Y-axis direction that R890 of horizontal varieties were higher than the erect ones, and seen from the X-axis direction that the greater ΔR890 was, the lower LAI one within the same plant type varieties, which indicted that the combination of plant-type and the population magnitude can be initially identified by this method.

  2. Linkages of Biodiversity and Canopy Lidar Metrics in Central Africa

    Science.gov (United States)

    Laporte, N. T.; Horning, N.; Morgan, D.

    2012-12-01

    Central Africa contains the second largest dense humid forest in the world, and one of the largest carbon and biodiversity reservoirs on Earth. With 60% of the forest currently under logging concessions, the Congo basin is poised to undergo extensive land use change. Increases in bushmeat trade, resulting from extensification of logging roads, have already been well documented. From a quantitative standpoint, little is known of the structure of these forests, how logging affects forest biomass or functioning, and how canopy habitat heterogeneity relates to animal species richness or diversity. Here we document, using random forest and MaxEnt, how information from GLAS lidar metrics, ALOS-PalSAR and Landsat imagery, combined with field observations of great ape nest locations ( figure 1) and vegetation types, can be merged to create a map of gorilla and chimpanzee habitat in a region spanning Cameroon, the Republic of Congo, and the Central African Republic. From an initial selection of 48 variables we found the most important for mapping habitat suitability were a combination of PalSAR backscatter, NDVI image texture. Landsat ETM+ top of the atmosphere reflectance and principle component images. While NDVI from ETM+bands was an important predictor of gorilla and chimpanzee nest presence, species-specific differences in habitat use were also identified. Tree canopy height from GLAS was the most important variable predicting chimpanzee nesting habitat, while Landsat ETM+ bands were most important for gorilla nesting habitat. These preliminary results indicate merging field observations with satellite imagery promises to significantly improve our understanding of ape habitat-use at the landscape scale.ombining GLAS lidar metrics, ALOS-PalSAR and Landsat imager with field observations of great ape nest locations for habitat mapping in C. Africa

  3. Estimating Canopy Nitrogen Concentration in Sugarcane Using Field Imaging Spectroscopy

    Directory of Open Access Journals (Sweden)

    Marc Souris

    2012-06-01

    Full Text Available The retrieval of nutrient concentration in sugarcane through hyperspectral remote sensing is widely known to be affected by canopy architecture. The goal of this research was to develop an estimation model that could explain the nitrogen variations in sugarcane with combined cultivars. Reflectance spectra were measured over the sugarcane canopy using a field spectroradiometer. The models were calibrated by a vegetation index and multiple linear regression. The original reflectance was transformed into a First-Derivative Spectrum (FDS and two absorption features. The results indicated that the sensitive spectral wavelengths for quantifying nitrogen content existed mainly in the visible, red edge and far near-infrared regions of the electromagnetic spectrum. Normalized Differential Index (NDI based on FDS(750/700 and Ratio Spectral Index (RVI based on FDS(724/700 are best suited for characterizing the nitrogen concentration. The modified estimation model, generated by the Stepwise Multiple Linear Regression (SMLR technique from FDS centered at 410, 426, 720, 754, and 1,216 nm, yielded the highest correlation coefficient value of 0.86 and Root Mean Square Error of the Estimate (RMSE value of 0.033%N (n = 90 with nitrogen concentration in sugarcane. The results of this research demonstrated that the estimation model developed by SMLR yielded a higher correlation coefficient with nitrogen content than the model computed by narrow vegetation indices. The strong correlation between measured and estimated nitrogen concentration indicated that the methods proposed in this study could be used for the reliable diagnosis of nitrogen quantity in sugarcane. Finally, the success of the field spectroscopy used for estimating the nutrient quality of sugarcane allowed an additional experiment using the polar orbiting hyperspectral data for the timely determination of crop nutrient status in rangelands without any requirement of prior

  4. Depreissia decipiens, an enigmatic canopy spider from Borneo revisited (Araneae, Salticidae), with remarks on the distribution and diversity of canopy spiders in Sabah, Borneo.

    Science.gov (United States)

    Deeleman-Reinhold, Christa L; Miller, Jeremy; Floren, Andreas

    2016-01-01

    Depreissia is a little known genus comprising two hymenopteran-mimicking species, one found in Central Africa and one in the north of Borneo. The male of Depreissia decipiens is redescribed, the female is described for the first time. The carapace is elongated, dorsally flattened and rhombus-shaped, the rear of the thorax laterally depressed and transformed, with a pair of deep pits; the pedicel is almost as long as the abdomen. The male palp is unusual, characterized by the transverse deeply split membranous tegulum separating a ventral part which bears a sclerotized tegular apophysis and a large dagger-like retrodirected median apophysis. The female epigyne consists of one pair of large adjacent spermathecae and very long copulatory ducts arising posteriorly and rising laterally alongside the spermathecae continuing in several vertical and horizontal coils over the anterior surface. Relationships within the Salticidae are discussed and an affinity with the Cocalodinae is suggested. Arguments are provided for a hypothesis that Depreissia decipiens is not ant-mimicking as was previously believed, but is a mimic of polistinine wasps. The species was found in the canopy in the Kinabalu area only, in primary and old secondary rainforest at 200-700 m.a.s.l. Overlap of canopy-dwelling spider species with those in the understorey are discussed and examples of species richness and endemism in the canopy are highlighted. Canopy fogging is a very efficient method of collecting for most arthropods. The canopy fauna adds an extra dimension to the known biodiversity of the tropical rainforest. In southeast Asia, canopy research has been neglected, inhibiting evaluation of comparative results of this canopy project with that from other regions. More use of fogging as a collecting method would greatly improve insight into the actual species richness and species distribution in general.

  5. Modeling of the radiative energy balance within a crop canopy for estimating evapotranspiration: Studies on a row planted soybean canopy

    International Nuclear Information System (INIS)

    The spatial distribution and density of the leaf area within a crop canopy were used to estimate the radiational environment and evapotranspiration. Morphological measurements were pursued on the soybean stands in the early stage of growth when the two-dimensional foliage distribution pattern existed. The rectangular tube model was used to calculate the light absorption by parallel row of crops both short-wave radiation (direct and diffuse solar radiation, and scattered radiation by plant elements) and long-wave radiation (emanated radiation from the sky, ground and leaves). The simulated profiles are in close agreement with the experimentally measured short-wave and net radiation data. The evapotranspiration of a row was calcuated using a simulated net radiation. The model calculation also agreed well with the evapotranspiration estimated by the Bowen ratio method

  6. Forest canopy structural parameters and Leaf Area Index retrieval using multi-sensors synergy observations

    Science.gov (United States)

    Fu, Zhuo; Wang, Jindi; Song, Jinling; Zhou, Hongmin; Pang, Yong; Cai, Wenwen; Chen, Baisong

    2009-08-01

    Leaf Area Index (LAI) is a key vegetation structural parameter in ecosystem. Our new approach is on forest LAI retrieval by GOMS model (Geometrical-Optical model considering the effect of crown shape and Mutual Shadowing) inversion using multi-sensor observations. The mountainous terrain forest area in Dayekou in Gansu province of China is selected as our study area. The model inversion method by integrating MODIS, MISR and LIDAR data for forest canopy LAI retrieval is proposed. In the MODIS sub-pixel scale, four scene components' spectrum (sunlit canopy, sunlit background, shaded canopy and shaded background) of GOMS model are extracted from SPOT data. And tree heights are extracted from airborne LIDAR data. The extracted four scene components and tree heights are taken as the a priori knowledge applied in GOMS model inversion for improving forest canopy structural parameters estimation accuracy. According to the field investigation, BRDF data set of needle forest pixels is collected by combining MODIS BRDF product and MISR BRF product. Then forest canopy parameters are retrieved based on GOMS. Finally, LAI of forest canopy is estimated by the retrieved structural parameters and it is compared with ground measurement. Results indicate that it is possible to improve the forest canopy structural parameters estimation accuracy by combining observations of passive and active remote sensors.

  7. [Canopy conductance characteristics of poplar in agroforestry system in west Liaoning Province of Northeast China].

    Science.gov (United States)

    Li, Zheng; Niu, Li-Hua; Yuan, Feng-Hui; Guan, De-Xin; Wang, An-Zhi; Jin, Chang-Jie; Wu, Jia-Bing

    2012-11-01

    By using Granier' s thermal dissipation probe, the sap flow of poplar in a poplar-maize agroforestry system in west Liaoning was continuously measured, and as well, the environmental factors such as air temperature, air humidity, net radiation, wind speed, soil temperature, and soil moisture content were synchronically measured. Based on the sap flow data, the canopy conductance of poplar was calculated with simplified Penman-Monteith equation. In the study area, the diurnal variation of poplar' s canopy conductance showed a "single peak" curve, whereas the seasonal variation showed a decreasing trend. There was a negative logarithm relationship between the canopy conductance and vapor pressure deficit, with the sensitivity of canopy conductance to vapor pressure deficit change decreased gradually from May to September. The canopy conductance had a positive relationship with solar radiation. In different months, the correlation degree of canopy conductance with environmental factors differed. The vapor pressure deficit in the whole growth period of poplar was the most significant environmental factor correlated with the canopy conductance.

  8. Role of canopy interception on water and nutrient cycling in Chinese fir plantation ecosystem

    Institute of Scientific and Technical Information of China (English)

    KANG Wenxing; DENG Xiangwen; ZHAO Zhonghui

    2007-01-01

    The role of canopy interception on nutrient cycling in Chinese fir plantation ecosystem was studied on the basis of the position data during four years.Results indicate that the average canopy interception amount was 267.0 mm/year.Canopy interception play a significant role in water cycle and nutrient cycle processes in ecosystem,and was an important part of evaporation from the Chinese fir plantation ecosystem,being up to 27.2%.The evaporation from the canopy interception was an important way of water output from ecosystem,up to 19.9%.The flush-eluviation of branches and leaves caused by canopy interception brought nutrient input of 143.629 kg/(hm2·year),which was 117.2% of the input 63.924kg/(hm2·year)from the atmospheric precipitation.The decreased amount of 80.1 mm precipitation input caused by canopy interception reduced the amount of rainfall into the stand surface and infiltration into the soil,reduced the output with runoff and drainage,and decreased nutrient loss through output water.Therefore,the additional preserve of nutrient by canopy interception was 8.664 kg/(hm2·year).

  9. Photosynthesis-transpiration coupling model at canopy scale in terrestrial ecosystem

    Institute of Scientific and Technical Information of China (English)

    REN; Chuanyou; YU; Guirui; WANG; Qiufeng; GUAN; Dexin

    2005-01-01

    At the hypothesis of big leaf, an ecosystem photosynthesis-transpiration coupling cycle model was established by the scaled SMPT-SB model from single leaf to canopy, and model parameterization methods were discussed. Through simulating the canopy light distribution, canopy internal conductance to CO2 can be scaled from single leaf to canopy by integrating to canopy using the relationship between single internal conductance and photosynthetic photon flux density. Using the data observed by eddy covariance method from the Changbai Mountains site of ChinaFLUX, the application of the model at the canopy scale was examined. Under no water stress, the simulated net ecosystem photosynthesis rate fitted with the observed data very well, the slope and R2 of the line regression equation of the observed and simulated values were 0.7977 and 0.8892, respectively (n = 752), and average absolute error was 3.78 μmol CO2 m-2s-1; the slope, R2 and average absolute error of transpiration rate were 0.7314, 0.4355 and 1.60mmol H2O m-2 s-1, respectively (n = 752). The relationship between canopy photosynthesis,transpiration and external environmental conditions was discussed by treating the canopy as a whole and neglecting the comprehensive feedback mechanism within canopy, and it was noted that the precipitation course affected the transpiration rate simulation badly. Compared to the models based on eco-physiological processes, the SMPT-SB model was simple and easy to be used. And it can be used as a basic carbon and water coupling model of soil-plant-atmosphere continuum.

  10. Forest canopy height estimation using double-frequency repeat pass interferometry

    Science.gov (United States)

    Karamvasis, Kleanthis; Karathanassi, Vassilia

    2015-06-01

    In recent years, many efforts have been made in order to assess forest stand parameters from remote sensing data, as a mean to estimate the above-ground carbon stock of forests in the context of the Kyoto protocol. Synthetic aperture radar interferometry (InSAR) techniques have gained traction in last decade as a viable technology for vegetation parameter estimation. Many works have shown that forest canopy height, which is a critical parameter for quantifying the terrestrial carbon cycle, can be estimated with InSAR. However, research is still needed to understand further the interaction of SAR signals with forest canopy and to develop an operational method for forestry applications. This work discusses the use of repeat pass interferometry with ALOS PALSAR (L band) HH polarized and COSMO Skymed (X band) HH polarized acquisitions over the Taxiarchis forest (Chalkidiki, Greece), in order to produce accurate digital elevation models (DEMs) and estimate canopy height with interferometric processing. The effect of wavelength-dependent penetration depth into the canopy is known to be strong, and could potentially lead to forest canopy height mapping using dual-wavelength SAR interferometry at X- and L-band. The method is based on scattering phase center separation at different wavelengths. It involves the generation of a terrain elevation model underneath the forest canopy from repeat-pass L-band InSAR data as well as the generation of a canopy surface elevation model from repeat pass X-band InSAR data. The terrain model is then used to remove the terrain component from the repeat pass interferometric X-band elevation model, so as to enable the forest canopy height estimation. The canopy height results were compared to a field survey with 6.9 m root mean square error (RMSE). The effects of vegetation characteristics, SAR incidence angle and view geometry, and terrain slope on the accuracy of the results have also been studied in this work.

  11. Response of clonal plasticity of Fargesia nitida to different canopy conditions of subalpine coniferous forest

    Institute of Scientific and Technical Information of China (English)

    Jianping TAO; Lixia SONG; Yongjian WANG; Weiyin ZHANG

    2008-01-01

    The aim of this study is to explore the effects of canopy conditions on clump and culm numbers, and the morphological plasticity and biomass distribution patterns of the dwarf bamboo species Fargesia nitida. Specifically, we investigated the effects of canopy condi-tions on the growth and morphological characteristics of F. nitida, and the adaptive responses of F. nitida to dif-ferent canopy conditions and its ecological senses. The results indicate that forest canopy had a significant effect on the genet density and culm number per clump, while it did not affect the ramet density. Clumps tended to be few and large in gaps and forest edge plots, and small under forest understory plots. The ramets showed an even distribution under the closed canopy, and clus-ter distribution under gaps and forest edge plots. The forest canopy had a significant effect on both the ramets'biomass and biomass allocation. Favourable light conditions promoted ramet growth and biomass accumulation. Greater amounts of biomass in gaps and forest edge plots were shown by the higher number of culms per clump and the diameter of these culms. Under closed canopy, the bamboos increased their branching angle, leaf biomass allocation, specific leaf area and leaf area ratio to exploit more favourable light conditions in these locations. The spacer length, specific spacer length and spacer branching angles all showed significant differences between gaps and closed canopy conditions. The larger specific spacer length and spacer branching angle were beneficial for bamboo growth, scattering the ramets and exploiting more favourable light conditions. In summary, this study shows that to varying degrees, F nitida exhibits both a wide ecological amplitude and high degree of morphological plasticity in response to differing forest canopy conditions. More-over, the changes in plasticity enable the plants to optimize their light usage efficiency to promote growth and increase access to resources available in

  12. Stochastic Transport Theory for Investigating the Three-Dimensional Canopy Structure from Space Measurements

    Science.gov (United States)

    Huang, Dong; Knyazikhin, Yuri; Wang, Weile; Deering, Donald W,; Stenberg, Pauline; Shabanov, Nikolay; Tan, Bin; Myneni, Ranga B.

    2008-01-01

    Radiation reflected from vegetation canopies exhibits high spatial variation. Satellite-borne sensors measure the mean intensities emanating from heterogeneous vegetated pixels. The theory of radiative transfer in stochastic media provides the most logical linkage between satellite observations and the three-dimensional canopy structure through a closed system of simple equations which contains the mean intensity and higher statistical moments directly as its unknowns. Although this theory has been a highly active research field in recent years, its potential for satellite remote sensing of vegetated surfaces has not been fully realized because of the lack of models of a canopy pair-correlation function that the stochastic radiative transfer equations require. The pair correlation function is defined as the probability of finding simultaneously phytoelements at two points. This paper presents analytical and Monte Carlo generated pair correlation functions. Theoretical and numerical analyses show that the spatial correlation between phytoelements is primarily responsible for the effects of the three-dimensional canopy structure on canopy reflective and absorptive properties. The pair correlation function, therefore, is the most natural and physically meaningful measure of the canopy structure over a wide range of scales. The stochastic radiative transfer equations naturally admit this measure and thus provide a powerful means to investigate the three-dimensional canopy structure from space. Canopy reflectances predicted by the stochastic equations are assessed by comparisons with the PARABOLA measurements from coniferous and broadleaf forest stands in the BOREAS Southern Study Areas. The pair correlation functions are derived from data on tree structural parameters collected during field campaigns conducted at these sites. The simulated canopy reflectances compare well with the PARABOLA data.

  13. The spatial scaling effect of continuous canopy Leaves Area Index retrieved by remote sensing

    Institute of Scientific and Technical Information of China (English)

    XU XiRu; FAN WenJie; TAO Xin

    2009-01-01

    Leave Area Index (LAI) is one of the most basic parameters to describe the geometric structure of plant canopies.It is also important input data for climatic model and interaction model between Earth surface and atmosphere,and some other things.The spatial scaling of retrieved LAI has been widely studied in recent years.Based on the new canopy reflectance model,the mechanism of the scaling effect of continuous canopy Leaf Area Index is studied,and the scaling transform formula among different scales is found.Both the numerical simulation and the field validation show that the scale transform formula is reliable.

  14. The spatial scaling effect of continuous canopy Leaves Area Index retrieved by remote sensing

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Leave Area Index (LAI) is one of the most basic parameters to describe the geometric structure of plant canopies. It is also important input data for climatic model and interaction model between Earth surface and atmosphere, and some other things. The spatial scaling of retrieved LAI has been widely studied in recent years. Based on the new canopy reflectance model, the mechanism of the scaling effect of con- tinuous canopy Leaf Area Index is studied, and the scaling transform formula among different scales is found. Both the numerical simulation and the field validation show that the scale transform formula is reliable.

  15. [Distribution patterns of shoots, flowers and seeds in Ginkgo biloba canopy and their relationships].

    Science.gov (United States)

    Wang, J; Wei, G

    2000-04-01

    The distribution patterns of shoots, flowers and seeds in the canopy of 14 years old engrafted Ginkgo biloba and their relationships were investigated with stratification method. The result shows that long shoots, short shoots, bearing-shoots and flowers uniformly distributed in the central section of canopy. From the top to the bottom, the average age and the divaricating angle of long shoots increase 51.3% of the seeds distributed in 180-320 cm layer from the ground. The number of shoots, flowers and seeds in different canopy layers was closely correlated.

  16. Abundance of Green Tree Frogs and Insects in Artificial Canopy Gaps in a Bottomland Hardwood Forest.

    Energy Technology Data Exchange (ETDEWEB)

    Horn, Scott; Hanula, James, L.; Ulyshen, Michael D.; Kilgo, John, C.

    2005-04-01

    ABSTRACT - We found more green tree frogs ( Hyla cinerea) n canopv gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopv gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat Flies were the most commonlv collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

  17. Regional and historical factors supplement current climate in shaping global forest canopy height

    DEFF Research Database (Denmark)

    Zhang, Jian; Nielsen, Scott; Mao, Lingfeng;

    2016-01-01

    Summary Canopy height is a key factor that affects carbon storage, vegetation productivity and biodiversity in forests, as well as an indicator of key processes such as biomass allocation. However, global variation in forest canopy height and its determinants are poorly known. We used global data...... for 32 304 forested 55-km grid cells using 1-km global canopy height data (maximum height of 1-km cells within a 55-km grid). Variation in Hmax was related to latitude and biomes, along with environmental and historical variables. Both spatial and non-spatial linear models were used to assess...

  18. Temporal Dynamics and Environmental Controls on Carbon Isotope Discrimination at the Canopy Scale

    Science.gov (United States)

    Billmark, K. A.; Griffis, T. J.; Lee, X.; Welp, L. R.; Baker, J. M.

    2007-12-01

    Much is currently known about 13C isotopic discrimination by C3 plants at the leaf scale. Multidisciplinary techniques from micrometeorology and the stable isotope community have exploited this knowledge to better understand the dynamic processes and environmental controls on atmosphere/biosphere exchange. Unfortunately, there remains a dearth of measurements relating carbon isotope discrimination at the canopy scale (Δcanopy) with the net carbon ecosystem flux. Our goals here are to evaluate temporal fluctuations in Δcanopy as a result of variable environmental conditions and to critically assess the efficacy of leaf-level assumptions applied at the canopy scale. At the University of Minnesota's Rosemount Research and Outreach Center (RROC), the exchange of 12CO2 and 13CO2 isotopologues are continuously measured using tunable diode laser (TDL) and micrometeorological techniques (eddy covariance-TDL and gradient-TDL methods). We utilize these data in conjunction with eddy flux and ancillary meteorological measurements to estimate Δcanopy, a key parameter for understanding ecosystem carbon source/sink behavior. Traditionally, Δcanopy is estimated using stomatal conductance models and leaf level isotopic discrimination parameters. In this study, we similarly calculated Δcanopy (Big-Leaf approach), where stomatal conductance was obtained through inversion of the Penman-Monteith equation. Additionally, given the high resolution of eddy flux and isoflux measurements at the RROC site, we were able to calculate Δcanopy using an inverse flux approach. For this approach, we partitioned the net ecosystem flux using eddy covariance measurements and a nighttime temperature regression method, and then calculated Δcanopy from the isoflux mass balance. Both calculations of Δcanopy emphasized the diurnal, daily and seasonal variability of this important parameter. In particular, atypically hot weather strongly influenced canopy isotope discrimination. Trends in the two Δcanopy

  19. Plant science in forest canopies--the first 30 years of advances and challenges (1980-2010).

    Science.gov (United States)

    Lowman, Margaret D; Schowalter, Timothy D

    2012-04-01

    As an emerging subdiscipline of forest biology, canopy science has undergone a transition from observational, 'oh-wow' exploration to a more hypothesis-driven, experimental arena for rigorous field biology. Although efforts to explore forest canopies have occurred for a century, the new tools to access the treetops during the past 30 yr facilitated not only widespread exploration but also new discoveries about the complexity and global effects of this so-called 'eighth continent of the planet'. The forest canopy is the engine that fixes solar energy in carbohydrates to power interactions among forest components that, in turn, affect regional and global climate, biogeochemical cycling and ecosystem services. Climate change, biodiversity conservation, fresh water conservation, ecosystem productivity, and carbon sequestration represent important components of forest research that benefit from access to the canopy for rigorous study. Although some canopy variables can be observed or measured from the ground, vertical and horizontal variation in environmental conditions and processes within the canopy that determine canopy-atmosphere and canopy-forest floor interactions are best measured within the canopy. Canopy science has matured into a cutting-edge subset of forest research, and the treetops also serve as social and economic drivers for sustainable communities, fostering science education and ecotourism. This interdisciplinary context of forest canopy science has inspired innovative new approaches to environmental stewardship, involving diverse stakeholders.

  20. Plant science in forest canopies--the first 30 years of advances and challenges (1980-2010).

    Science.gov (United States)

    Lowman, Margaret D; Schowalter, Timothy D

    2012-04-01

    As an emerging subdiscipline of forest biology, canopy science has undergone a transition from observational, 'oh-wow' exploration to a more hypothesis-driven, experimental arena for rigorous field biology. Although efforts to explore forest canopies have occurred for a century, the new tools to access the treetops during the past 30 yr facilitated not only widespread exploration but also new discoveries about the complexity and global effects of this so-called 'eighth continent of the planet'. The forest canopy is the engine that fixes solar energy in carbohydrates to power interactions among forest components that, in turn, affect regional and global climate, biogeochemical cycling and ecosystem services. Climate change, biodiversity conservation, fresh water conservation, ecosystem productivity, and carbon sequestration represent important components of forest research that benefit from access to the canopy for rigorous study. Although some canopy variables can be observed or measured from the ground, vertical and horizontal variation in environmental conditions and processes within the canopy that determine canopy-atmosphere and canopy-forest floor interactions are best measured within the canopy. Canopy science has matured into a cutting-edge subset of forest research, and the treetops also serve as social and economic drivers for sustainable communities, fostering science education and ecotourism. This interdisciplinary context of forest canopy science has inspired innovative new approaches to environmental stewardship, involving diverse stakeholders. PMID:22348430

  1. Up-scaling of water use efficiency from leaf to canopy as based on leaf gas exchange relationships and the modeled in-canopy light distribution

    DEFF Research Database (Denmark)

    Linderson, Maj-Lena; Mikkelsen, Teis Nørgaard; Ibrom, Andreas;

    2012-01-01

    on incoming PAR below 500 μmol m−2 s−1 is independent, both of the canopy levels and of variations in the environmental parameters. The average WUEnormleaf for PAR above 500 μmol m−2 s−1 was found to be 5.5 μmol CO2 (mmol H2O)−1 hPa and, for the full range, 2.3 μmol CO2 (mmol H2O)−1 hPa. These results showed...... that WUE can be up-scaled from leaf to canopy on the basis of WUEnormleaf and the PAR distribution within the canopy. The up-scaling conducted was based on this WUEnormleaf – PAR relationship, the lightdistribution being assessed using the MAESTRA model, parameterized in accordance with measurements...

  2. Technical Note: A combined soil/canopy chamber system for tracing δ13C in soil respiration after a 13CO2 canopy pulse labelling

    Directory of Open Access Journals (Sweden)

    A. Knohl

    2010-03-01

    Full Text Available In this study we present a combined soil/canopy chamber system that allows the investigation of carbon flow through the atmosphere-plant-soil system via a 13CO2 canopy labelling approach – especially when using short vegetation such as tree saplings. The developed chamber system clearly separates soil and canopy compartment in order to (a prevent physical diffusion of 13C tracer into the soil chamber during a 13CO2 canopy pulse labelling (b study stable isotope processes in soil and canopy individually and independently. In combination with novel laser spectrometry, measuring CO2 (Aerodyne Research Inc. and H2O (Los Gatos Research Inc. isotopologue mixing ratios at a rate of 1 Hz, we were able to trace the label transport from leaves to roots in small beech saplings (Fagus sylvatica L. without interference due to contamination of the soil matrix and/or canopy re-labelling via tracer returning from soil respiration. A very tight coupling between above- (photosynthesis and belowground (soil respiration processes was found, where newly assimilated carbon fixed from the 13CO2 atmosphere re-appeared in soil respiration 2 h after it has been photosynthetically fixed. We were able to demonstrate that leaf metabolism acts on substrate for soil respiration on a diurnal timescale, with input of fresh photosynthates during daytime and starch re-mobilisation during nighttime. Long-term fluctuations in the δ13C of soil respiration, as observed under reduced water availability, could not be described by any biological or instrumental mechanism, as they did occur in an atypical ca. 15 hourly rhythm – potential mechanisms driving these fluctuations are hypothesized.

  3. Retrieval of canopy component temperatures through Bayesian inversion of directional thermal measurements

    NARCIS (Netherlands)

    Timmermans, J.; Verhoef, W.; Tol, van der C.; Su, Z.

    2009-01-01

    Evapotranspiration is usually estimated in remote sensing from single temperature value representing both soil and vegetation. This surface temperature is an aggregate over multiple canopy components. The temperature of the individual components can differ significantly, introducing errors in the ev

  4. Performance of the Cray T3D and emerging architectures on canopy QCD applications

    CERN Document Server

    Fischler, M; Fischler, Mark; Uchima, Mike

    1995-01-01

    The Cray T3D, an MIMD system with NUMA shared memory capabilities and in principle very low communications latency, can support the Canopy framework for grid-oriented applications. CANOPY has been ported to the T3D, with the intent of making it available to a spectrum of users. The performance of the T3D running Canopy has been benchmarked on five QCD applications extensively run on ACPMAPS at Fermilab, requiring a variety of data access patterns. The net performance and scaling behavior reveals an efficiency relative to peak Gflops almost identical to that achieved on ACPMAPS. Detailed studies of the major factors impacting performance are presented. Generalizations applying this analysis to the newly emerging crop of commercial systems reveal where their limitations will lie. On these applications efficiencies of above 25\\% are not to be expected; eliminating overheads due to Canopy will improve matters, but by less than a factor of two.

  5. 100-Meter Resolution Tree Canopy of the Conterminous United States - Direct Download

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This map layer contains tree canopy data for the conterminous United States, in an Albers Equal-Area Conic projection and at a resolution of 100 meters. The tree...

  6. Upper canopy pollinators of Eucryphia cordifolia Cav., a tree of South American temperate rain forest

    Directory of Open Access Journals (Sweden)

    Cecilia Smith-Ramírez

    2016-05-01

    Full Text Available Ecological processes in the upper canopy of temperate forests have been seldom studied because of the limited accessibility. Here, we present the results of the first survey of the pollinator assemblage and the frequency of insect visits to flowers in the upper branches of ulmo, Eucryphia cordifolia Cav., an emergent 30-40 m-tall tree in rainforests of Chiloé Island, Chile. We compared these findings with a survey of flower visitors restricted to lower branches of E. cordifolia 1- in the forest understory, 2- in lower branches in an agroforestry area. We found 10 species of pollinators in canopy, and eight, 12 and 15 species in understory, depending of tree locations. The main pollinators of E. cordifolia in the upper canopy differed significantly from the pollinator assemblage recorded in lower tree branches. We conclude that the pollinator assemblages of the temperate forest canopy and interior are still unknown.

  7. A comparison of Stokes parameters for sky and a soybean canopy

    Science.gov (United States)

    Schutt, John B.; Holben, Brent N.; Mcmurtrey, James E., III

    1991-01-01

    An evaluation of the polarization signatures obtained from the four Stokes parameters is reported for the atmosphere and a soybean canopy. The polarimeter design and operation are set forth, and the Stokes parameters' relationships are discussed. The canopy polarization was different from the sky at azimuths of 90 and 270 degrees, demonstrating a response that reflecting the sky polarization signatures across a plane parallel to the polarization axis and passing through a phase angle of about 90 degrees would produce. Classical behavior in terms of electromagnetic theory was found in the fourth Stokes parameter of the canopy which was obtained in the principal plane. Only the third Stokes parameter is demonstrated to be unambiguously affected in a comparison of sky polarization signatures and aerosol optical densities. The similarity between the sky at azimuth 180 degrees and the soybean canopy data at the principal plane is interesting considering the disparity of the subjects.

  8. Do changes in the azimuthal distribution of maize leaves over time affect canopy light absorption?

    International Nuclear Information System (INIS)

    In maize canopies, when modelling the architecture and light regime one usually assumes leaf azimuths are distributed uniformly. Once we had demonstrated azimuthal re-orientation of maize leaves during the vegetative phase, we tested the weight of this hypothesis on the light absorbed daily by the canopy. We thus modelled the three-dimensional (3D) geometry of maize canopies with various plant densities and at different developmental stages using plant digitizing under field conditions. We simulated radiative transfer using a volume-based approach within actual and hypothetical canopies, obtained by simply rearranging leaf azimuths. Simulations indicated that changes to horizontal heterogeneity have little effect on daily light absorption efficiency. It is concluded that changes in leaf azimuths do not have to be taken into account in crop-functioning models. (author)

  9. Determination of Wind Pressure Coefficients for Arc-Shaped Canopy Roof with Numerical Wind Tunnel Method

    Institute of Scientific and Technical Information of China (English)

    YIN Yue; ZHANG Tianshu; HAN Qinghua; YANG Huidong

    2009-01-01

    In this paper, the wind load on an arc-shaped canopy roof was studied with numerical wind tunnel method(NWTM). Three-dimensional models were set up for the canopy roof with opened or closed skylights. The air flow around the roof under wind action from three directions was analysed respectively. Wind pressure coeffi-cients on the canopy roof were determined by NWTM. The results of NWTM agreed well with those of wind tunnel test for the roof with opened skylights, which verified the applicability and rationality of NWTM. The effect of the closure of skylights was then investigated with NWTM. It was concluded that the closure of the skylights may in-crease the wind suction on the top surface of the roof greatly and should be considered in the structure design of the canopy roof.

  10. Evaluation of Forest Canopy and Understory Gap Fraction Derived from Terrestrial Laser Scanning

    Science.gov (United States)

    Chen, K. C.; Wang, C. K.

    2016-06-01

    The quantification of forest carbon sequestration is helpful to understand the carbon storage on the Earth. The estimation of forest carbon sequestration can be achieved by the use of leaf area index (LAI), which is derived from forest gap fraction. The hemispherical image-based technique is the most popular non-destructive means for obtaining such information. However, only the gap fraction of the top canopy is derived due to the limitation of imaging technique. The gap fraction information of understory is thus neglected. In this study, we evaluate the use of a terrestrial laser scanner (TLS) to obtain the forest canopy and understory gap fraction. The forest TLS data were manually classified as the top canopy and understory layers to facilitate the estimation of top canopy and understory gap fraction, respectively.

  11. Tree-mycorrhizal associations detected remotely from canopy spectral properties.

    Science.gov (United States)

    Fisher, Joshua B; Sweeney, Sean; Brzostek, Edward R; Evans, Tom P; Johnson, Daniel J; Myers, Jonathan A; Bourg, Norman A; Wolf, Amy T; Howe, Robert W; Phillips, Richard P

    2016-07-01

    A central challenge in global ecology is the identification of key functional processes in ecosystems that scale, but do not require, data for individual species across landscapes. Given that nearly all tree species form symbiotic relationships with one of two types of mycorrhizal fungi - arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi - and that AM- and ECM-dominated forests often have distinct nutrient economies, the detection and mapping of mycorrhizae over large areas could provide valuable insights about fundamental ecosystem processes such as nutrient cycling, species interactions, and overall forest productivity. We explored remotely sensed tree canopy spectral properties to detect underlying mycorrhizal association across a gradient of AM- and ECM-dominated forest plots. Statistical mining of reflectance and reflectance derivatives across moderate/high-resolution Landsat data revealed distinctly unique phenological signals that differentiated AM and ECM associations. This approach was trained and validated against measurements of tree species and mycorrhizal association across ~130 000 trees throughout the temperate United States. We were able to predict 77% of the variation in mycorrhizal association distribution within the forest plots (P < 0.001). The implications for this work move us toward mapping mycorrhizal association globally and advancing our understanding of biogeochemical cycling and other ecosystem processes. PMID:27282323

  12. Vegetation Biochemistry: What Can Imaging Spectrometry Tell Us About Canopies?

    Science.gov (United States)

    Goetz, Alexander F. H.; Gao, Bo-Cai; Wessman, Carol

    1991-01-01

    Changes in ecosystem processes such as productivity and decomposition may be expressed in the canopy foliar chemistry resulting from altered carbon allocation patterns, metabolic processes and nutrient availability. Understanding carbon balance on land over large regions requires quantitative determination of leaf constituents such as lignin and total nitrogen from remote sensing imaging systems. Results from spectral reflectance measurements of stacked leaves in the laboratory show that spectrum matching techniques are applicable to the derivation of the equivalent liquid water thickness in plants as well as to the extraction of dry leaf matter reflectance spectra from spectra of green leaves. The residual spectra derived by subtracting water spectra from the spectra of green leaves shows a feature at 1.72 micrometers that can be related to the lignin content of the leaves. Oak leaves have a deeper residual absorption feature than do cotton leaves which is consistent with their relative lignin content. Similar results are achieved when deriving the residuals from images taken over areas of grass and pine trees. Imaging spectrometry provides promise in developing images of various foliar biochemical constituents.

  13. CrossVit: Enhancing Canopy Monitoring Management Practices in Viticulture

    Science.gov (United States)

    Matese, Alessandro; Vaccari, Francesco Primo; Tomasi, Diego; Di Gennaro, Salvatore Filippo; Primicerio, Jacopo; Sabatini, Francesco; Guidoni, Silvia

    2013-01-01

    A new wireless sensor network (WSN), called CrossVit, and based on MEMSIC products, has been tested for two growing seasons in two vineyards in Italy. The aims are to evaluate the monitoring performances of the new WSN directly in the vineyard and collect air temperature, air humidity and solar radiation data to support vineyard management practices. The WSN consists of various levels: the Master/Gateway level coordinates the WSN and performs data aggregation; the Farm/Server level takes care of storing data on a server, data processing and graphic rendering; Nodes level is based on a network of peripheral nodes consisting of a MDA300 sensor board and Iris module and equipped with thermistors for air temperature, photodiodes for global and diffuse solar radiation, and an HTM2500LF sensor for relative humidity. The communication levels are: WSN links between gateways and sensor nodes by ZigBee, and long-range GSM/GPRS links between gateways and the server farm level. The system was able to monitor the agrometeorological parameters in the vineyard: solar radiation, air temperature and air humidity, detecting the differences between the canopy treatments applied. The performance of CrossVit, in terms of monitoring and reliability of the system, have been evaluated considering: its handiness, cost-effective, non-invasive dimensions and low power consumption. PMID:23765273

  14. CrossVit: Enhancing Canopy Monitoring Management Practices in Viticulture

    Directory of Open Access Journals (Sweden)

    Alessandro Matese

    2013-06-01

    Full Text Available A new wireless sensor network (WSN, called CrossVit, and based on MEMSIC products, has been tested for two growing seasons in two vineyards in Italy. The aims are to evaluate the monitoring performances of the new WSN directly in the vineyard and collect air temperature, air humidity and solar radiation data to support vineyard management practices. The WSN consists of various levels: the Master/Gateway level coordinates the WSN and performs data aggregation; the Farm/Server level takes care of storing data on a server, data processing and graphic rendering; Nodes level is based on a network of peripheral nodes consisting of a MDA300 sensor board and Iris module and equipped with thermistors for air temperature, photodiodes for global and diffuse solar radiation, and an HTM2500LF sensor for relative humidity. The communication levels are: WSN links between gateways and sensor nodes by ZigBee, and long-range GSM/GPRS links between gateways and the server farm level. The system was able to monitor the agrometeorological parameters in the vineyard: solar radiation, air temperature and air humidity, detecting the differences between the canopy treatments applied. The performance of CrossVit, in terms of monitoring and reliability of the system, have been evaluated considering: its handiness, cost-effective, non-invasive dimensions and low power consumption.

  15. Flocculent flows in the chromospheric canopy of a sunspot

    CERN Document Server

    Vissers, Gregal

    2012-01-01

    High-quality imaging spectroscopy in the H{\\alpha} line, obtained with the CRisp Imaging SpectroPolarimeter (CRISP) at the Swedish 1-m Solar Telescope (SST) at La Palma and covering a small sunspot and its surroundings, are studied. They exhibit ubiquitous flows both along fibrils making up the chromospheric canopy away from the spot and in the superpenumbra. We term these flows "flocculent" to describe their intermittent character, that is morphologically reminiscent of coronal rain. The flocculent flows are investigated further in order to determine their dynamic and morphological properties. For the measurement of their characteristic velocities, accelerations and sizes, we employ a new versatile analysis tool, the CRisp SPectral EXplorer (CRISPEX), which we describe in detail. Absolute velocities on the order of 7.2-82.4 km/s are found, with an average value of 36.5\\pm5.9 km/s and slightly higher typical velocities for features moving towards the sunspot than away. These velocities are much higher than th...

  16. Using Canopy Temperature to Infer Hydrologic Processes in Floodplain Forests

    Science.gov (United States)

    Lemon, M. G.; Allen, S. T.; Keim, R.; Edwards, B. L.; King, S. L.

    2015-12-01

    Decreased water availability due to hydrologic modifications, groundwater withdrawal, and climate change threaten the hydrological architecture of floodplain forests globally. The relative contributions of different sources of water (e.g., precipitation, surface flooding, and groundwater) to soil moisture on floodplains is poorly constrained, so identification of areas of water stress within a floodplain can provide valuable information about floodplain hydrology. Canopy temperature is a useful indicator of moisture stress and has long been used in agricultural and natural landscapes. Accordingly, thermal infrared (TIR) remote sensing data (spatial resolution of 1 km) from NASA's MODIS sensor was used to examine patterns of spatiotemporal variation in water stress in two floodplain forests over 12 growing seasons. On the upper Sabine River floodplain, Texas, increasing rainfall-derived soil moisture corresponded with increased heterogeneity of LST but there was weak association between river stage and heterogeneity. On the lower White River floodplain, Arkansas, distinct differences in LST between two reaches were observed during low flow years, while little relationship was observed between LST spatial variability and rainfall-derived soil moisture on either reach. The differences in hydrological control on these floodplain ecosystems have important ramifications for varying resilience to climate change and water resource management.

  17. A review of the roles of forest canopy gaps

    Institute of Scientific and Technical Information of China (English)

    Adele Muscolo; Silvio Bagnato; Maria Sidari; Roberto Mercurio

    2014-01-01

    Treefall gap, canopy opening caused by the death of one or more trees, is the dominant form of disturbance in many forest systems worldwide. Gaps play an important role in forest ecology helping to pre-serve bio-and pedo-diversity, influencing nutrient cycles, and maintain-ing the complex structure of the late-successional forests. Over the last 30 years, numerous reviews have been written describing gap dynamics. Here we synthesize current understanding on gap dynamics relating to tree regeneration with particular emphasis on gap characteristics consid-ered critical to develop ecologically sustainable forest management sys-tems and to conserve native biodiversity. Specifically, we addressed the question:how do gaps influence forest structure? From the literature re-viewed, the size of gaps induces important changes in factors such as light intensity, soil humidity and soil biological properties that influence tree species regeneration and differ in gaps of different sizes. Shade-tolerant species can colonize small gaps; shade-intolerant species need large gaps for successful regeneration. Additionally, gap dynamics differ between temperate, boreal, and tropical forests, showing the importance of climate differences in driving forest regeneration. This review summa-rizes information of use to forest managers who design cutting regimes that mimic natural disturbances and who must consider forest structure, forest climate, and the role of natural disturbance in their designs.

  18. Ecohydrological responses of dense canopies to environmental variability: 1. Interplay between vertical structure and photosynthetic pathway

    Science.gov (United States)

    Drewry, D. T.; Kumar, P.; Long, S.; Bernacchi, C.; Liang, X.-Z.; Sivapalan, M.

    2010-12-01

    Vegetation acclimation to changing climate, in particular elevated atmospheric concentrations of carbon dioxide (CO2), has been observed to include modifications to the biochemical and ecophysiological functioning of leaves and the structural components of the canopy. These responses have the potential to significantly modify plant carbon uptake and surface energy partitioning, and have been attributed with large-scale changes in surface hydrology over recent decades. While the aggregated effects of vegetation acclimation can be pronounced, they often result from subtle changes in canopy properties that require the resolution of physical, biochemical and ecophysiological processes through the canopy for accurate estimation. In this paper, the first of two, a multilayer canopy-soil-root system model developed to capture the emergent vegetation responses to environmental change is presented. The model incorporates both C3 and C4 photosynthetic pathways, and resolves the vertical radiation, thermal, and environmental regimes within the canopy. The tight coupling between leaf ecophysiological functioning and energy balance determines vegetation responses to climate states and perturbations, which are modulated by soil moisture states through the depth of the root system. The model is validated for three growing seasons each for soybean (C3) and maize (C4) using eddy-covariance fluxes of CO2, latent, and sensible heat collected at the Bondville (Illinois) Ameriflux tower site. The data set provides an opportunity to examine the role of important environmental drivers and model skill in capturing variability in canopy-atmosphere exchange. Vertical variation in radiative states and scalar fluxes over a mean diurnal cycle are examined to understand the role of canopy structure on the patterns of absorbed radiation and scalar flux magnitudes and the consequent differences in sunlit and shaded source/sink locations through the canopies. An analysis is made of the impact of

  19. Effect of canopy density on litter invertebrate community structure in pine forests

    Directory of Open Access Journals (Sweden)

    Brygadyrenko Viktor V.

    2016-03-01

    Full Text Available We investigated the structure of the litter invertebrate community in 141 pine (Pinus sylvestris Linnaeus, 1753 forest sites with five variants of canopy density (30-44, 45-59, 60-74, 75-89 and 90-100% in the steppe zone of Ukraine. The total number of litter macrofauna specimens collected at each site decreased from an average of 84/100 trap-days in the sparsest stands (30-40% density to 4-39 specimens/100 trap-days in the forests with a denser canopy. The number of macrofauna species caught in the pitfall traps does not vary significantly with different degrees of canopy density. The Shannon-Weaver and Pielou diversity indexes show increases corresponding to increasing stages of canopy density. The average share of phytophages in the trophic structure of the litter macrofauna does not vary with canopy density. The relative number of saprophages decreases from 54% in the forests with the sparsest canopy to 11-13% in the forests with denser canopies. The relative number of saprophages in pine forests (22% is lower than that in deciduous forests (40%. The share of zoophages in the trophic structure of the litter macrofauna increases significantly with the increase in the pine forest canopy density (from 21% in the sparsest plots to 59% in the densest. The relative number of polyphages is highest (47-65% when the canopy density is 45-89%. At canopy densities below or above this range, the share of polyphages in the community decreases to 20 and 24%, respectively. Regardless of canopy density, Formicidae and Lycosidae invariably rank amongst the first three dominant families. Nine families of invertebrates dominate in the pine forest stands with the highest density (90-100%, and 5-7 families dominate in the stands with lower density. For the pine forest litter macrofauna, we have observed an extreme simplification of the community size structure compared with natural and planted deciduous forests of the steppe zone of Ukraine.

  20. Comparative locomotor ecology of gibbons and macaques: selection of canopy elements for crossing gaps.

    Science.gov (United States)

    Cannon, C H; Leighton, M

    1994-04-01

    To examine functional questions of arboreal locomotor ecology, the selection of canopy elements by Bornean agile gibbons (Hylobates agilis) and long-tailed macaques (Macaca fascicularis) was contrasted, and related to locomotor behaviors. The two species, and in some cases, the macaque sexes, varied in their use of most structural elements. Although both species traveled most frequently in the main canopy layer (macaques: 56%, gibbons: 48%), the gibbons strongly preferred the emergent canopy layer and traveled higher than the macaques (31 vs. 23 m above ground) in larger trees (48 vs. 26 cm dbh). Macaques preferred to cross narrower gaps (50% were in the class 0.1-0.5 m wide) than gibbons (42% were 1.6-3.0 m wide), consistent with the maximum gap width each crossed (3.5 m for macaques, 9 m for gibbons). Macaques could cross only 12% of the gaps encountered in the main canopy, and < 5% of the gaps in each of the other four layers. In contrast, all layers appear relatively continuous for gibbons. Specialized locomotor modes were used disproportionately at the beginning and end of travel segments, further indicating that behavior was organized around gap crossings. A model is defined, the Perceived Continuity Index (PCI), which predicts the relative use of canopy strata for each species, based on the percentage of gaps a species can cross, the frequency of gaps, and median length of continuous canopy structure in each canopy layer. The results support the hypothesis that locomotor behaviors, and strategies of selecting canopy strata for travel, are strongly constrained by wide gaps between trees and are ultimately based on selection for efficient direct line travel between distant points. PMID:8048471

  1. Modelling the impact of green infrastructures on local microclimate within an idealized homogeneous urban canopy

    OpenAIRE

    Tavares, Richard; CALMET, Isabelle; DUPONT, Sylvain

    2015-01-01

    Aiming to overcome some of well-known limitations of existing models when applied to analyse the impact of green infrastructures in urban areas, we propose the ARPS-VUC model, a new urbanized version of the APRS model, applicable from neighbourhood to city scales. It results from the integration of the Vegetated Urban Canopy (VUC) model in the ARPS meteorological code. The novelty is the integration of an intermediate multilayer canopy modelling approach, where meteorological fields ...

  2. Hyperspectral indices for detecting changes in canopy reflectance as a result of underground natural gas leakage

    OpenAIRE

    Noomen, M.F.; Smith, K. L.; Colls, J.J.; Steven, M.D.; A. K. Skidmore; Meer, Van Der

    2008-01-01

    Natural gas leakage from underground pipelines is known to affect vegetation adversely, probably by displacement of the soil oxygen needed for respiration. This causes changes in plant and canopy reflectance, which may serve as indicators of gas leakage. In this study, a covariance analysis was performed between reflectance indices of maize (Zea mays) and wheat (Triticum aestivum) canopies and oxygen concentrations in a simulated natural gas leak. Twenty-nine days after oxygen shortage occurr...

  3. Impact of Canopy Openness on Spider Communities: Implications for Conservation Management of Formerly Coppiced Oak Forests

    Science.gov (United States)

    Košulič, Ondřej; Michalko, Radek; Hula, Vladimír

    2016-01-01

    Traditional woodland management created a mosaic of differently aged patches providing favorable conditions for a variety of arthropods. After abandonment of historical ownership patterns and traditional management and the deliberate transformation to high forest after World War II, large forest areas became darker and more homogeneous. This had significant negative consequences for biodiversity. An important question is whether even small-scale habitat structures maintained by different levels of canopy openness in abandoned coppiced forest may constitute conditions suitable for forest as well as open habitat specialists. We investigated the effect of canopy openness in former traditionally coppiced woodlands on the species richness, functional diversity, activity density, conservation value, and degree of rareness of epigeic spiders. In each of the eight studied locations, 60-m-long transect was established consisting of five pitfall traps placed at regular 15 m intervals along the gradient. Spiders were collected from May to July 2012. We recorded 90 spider species, including high proportions of xeric specialists (40%) and red-listed threatened species (26%). The peaks of conservation indicators, as well as spider community abundance, were shifted toward more open canopies. On the other hand, functional diversity peaked at more closed canopies followed by a rapid decrease with increasing canopy openness. Species richness was highest in the middle of the canopy openness gradient, suggesting an ecotone effect. Ordinations revealed that species of conservation concern tended to be associated with sparse and partly opened canopy. The results show that the various components of biodiversity peaked at different levels of canopy openness. Therefore, the restoration and suitable forest management of such conditions will retain important diversification of habitats in formerly coppiced oak forest stands. We indicate that permanent presence of small-scale improvements

  4. The canopy effect in AEM revisited : investigations using laser and radar altimetry

    OpenAIRE

    Beamish, David; Levaniemi, Hanna

    2010-01-01

    This study considers a specific issue, often termed the canopy effect that relates to our ability to provide accurate conductivity models from airborne electromagnetic (AEM) data. The central issue is one of the correct determination of sensor height(s) above the ground surface (terrain clearance) to the appropriate accuracy. The present study uses the radar and laser systems installed on a fixedwing AEM system to further investigate the effect. The canopy effect can arise due to a variety of...

  5. Impacts of tree canopy structure on wind flows and fire propagation simulated with FIRETEC

    OpenAIRE

    Pimont, François; Dupuy, Jean-Luc; Linn, Rodman R.; Dupont, Sylvain

    2011-01-01

    Forest fuel management in the context of fire prevention generally induces heterogeneous spatial patterns of vegetation. However, the impact of the canopy structure on both wind flows and fire behavior is not well understood. Here, a coupled atmosphere wildfire behavior model, HIGRAD/FIRETEC, was used to investigate the effects of canopy treatment on wind field and fire behavior in a typical Mediterranean pine ecosystem. First, the treatment-induced winds were simulated with the model. We obs...

  6. Canopy Spectral Invariants. Part 2; Application to Classification of Forest Types from Hyperspectral Data

    Science.gov (United States)

    Schull, M. A.; Knyazikhin, Y.; Xu, L.; Samanta, A.; Carmona, P. L.; Lepine, L.; Jenkins, J. P.; Ganguly, S.; Myneni, R. B.

    2011-01-01

    Many studies have been conducted to demonstrate the ability of hyperspectral data to discriminate plant dominant species. Most of them have employed the use of empirically based techniques, which are site specific, requires some initial training based on characteristics of known leaf and/or canopy spectra and therefore may not be extendable to operational use or adapted to changing or unknown land cover. In this paper we propose a physically based approach for separation of dominant forest type using hyperspectral data. The radiative transfer theory of canopy spectral invariants underlies the approach, which facilitates parameterization of the canopy reflectance in terms of the leaf spectral scattering and two spectrally invariant and structurally varying variables - recollision and directional escape probabilities. The methodology is based on the idea of retrieving spectrally invariant parameters from hyperspectral data first, and then relating their values to structural characteristics of three-dimensional canopy structure. Theoretical and empirical analyses of ground and airborne data acquired by Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over two sites in New England, USA, suggest that the canopy spectral invariants convey information about canopy structure at both the macro- and micro-scales. The total escape probability (one minus recollision probability) varies as a power function with the exponent related to the number of nested hierarchical levels present in the pixel. Its base is a geometrical mean of the local total escape probabilities and accounts for the cumulative effect of canopy structure over a wide range of scales. The ratio of the directional to the total escape probability becomes independent of the number of hierarchical levels and is a function of the canopy structure at the macro-scale such as tree spatial distribution, crown shape and size, within-crown foliage density and ground cover. These properties allow for the natural

  7. Portable and Airborne Small Footprint LiDAR: Forest Canopy Structure Estimation of Fire Managed Plots

    OpenAIRE

    Claudia M.C.S. Listopad; Drake, Jason B.; Weishampel, John F.; Ron. E. Masters

    2011-01-01

    This study used an affordable ground-based portable LiDAR system to provide an understanding of the structural differences between old-growth and secondary-growth Southeastern pine. It provided insight into the strengths and weaknesses in the structural determination of portable systems in contrast to airborne LiDAR systems. Portable LiDAR height profiles and derived metrics and indices (e.g., canopy cover, canopy height) were compared among plots with different fire frequency and fire season...

  8. Canopy arthropods community within and among oak species in central Mexico

    OpenAIRE

    Efraín TOVAR-SANCHEZ

    2009-01-01

    Quercus rugosa and Q.laurina are species that presents a wide geographical distribution range in temperate forests of Mexico. Oak canopies contain a considerable portion of arthropod diversity and the arthropods fauna fulfill a wide variety of ecological roles. We examined the effect of oak species and seasonal changes on some community structure parameters (diversity, composition, similarity, biomass, rare species, and density of arthropod fauna) of canopy arthropods. In total, 40 oak ca...

  9. Impact of Canopy Openness on Spider Communities: Implications for Conservation Management of Formerly Coppiced Oak Forests.

    Directory of Open Access Journals (Sweden)

    Ondřej Košulič

    Full Text Available Traditional woodland management created a mosaic of differently aged patches providing favorable conditions for a variety of arthropods. After abandonment of historical ownership patterns and traditional management and the deliberate transformation to high forest after World War II, large forest areas became darker and more homogeneous. This had significant negative consequences for biodiversity. An important question is whether even small-scale habitat structures maintained by different levels of canopy openness in abandoned coppiced forest may constitute conditions suitable for forest as well as open habitat specialists. We investigated the effect of canopy openness in former traditionally coppiced woodlands on the species richness, functional diversity, activity density, conservation value, and degree of rareness of epigeic spiders. In each of the eight studied locations, 60-m-long transect was established consisting of five pitfall traps placed at regular 15 m intervals along the gradient. Spiders were collected from May to July 2012. We recorded 90 spider species, including high proportions of xeric specialists (40% and red-listed threatened species (26%. The peaks of conservation indicators, as well as spider community abundance, were shifted toward more open canopies. On the other hand, functional diversity peaked at more closed canopies followed by a rapid decrease with increasing canopy openness. Species richness was highest in the middle of the canopy openness gradient, suggesting an ecotone effect. Ordinations revealed that species of conservation concern tended to be associated with sparse and partly opened canopy. The results show that the various components of biodiversity peaked at different levels of canopy openness. Therefore, the restoration and suitable forest management of such conditions will retain important diversification of habitats in formerly coppiced oak forest stands. We indicate that permanent presence of small

  10. Canopy spectral invariants, Part 2: Application to classification of forest types from hyperspectral data

    International Nuclear Information System (INIS)

    Many studies have been conducted to demonstrate the ability of hyperspectral data to discriminate plant dominant species. Most of them have employed the use of empirically based techniques, which are site specific, requires some initial training based on characteristics of known leaf and/or canopy spectra and therefore may not be extendable to operational use or adapted to changing or unknown land cover. In this paper we propose a physically based approach for separation of dominant forest type using hyperspectral data. The radiative transfer theory of canopy spectral invariants underlies the approach, which facilitates parameterization of the canopy reflectance in terms of the leaf spectral scattering and two spectrally invariant and structurally varying variables-recollision and directional escape probabilities. The methodology is based on the idea of retrieving spectrally invariant parameters from hyperspectral data first, and then relating their values to structural characteristics of three-dimensional canopy structure. Theoretical and empirical analyses of ground and airborne data acquired by Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over two sites in New England, USA, suggest that the canopy spectral invariants convey information about canopy structure at both the macro- and micro-scales. The total escape probability (one minus recollision probability) varies as a power function with the exponent related to the number of nested hierarchical levels present in the pixel. Its base is a geometrical mean of the local total escape probabilities and accounts for the cumulative effect of canopy structure over a wide range of scales. The ratio of the directional to the total escape probability becomes independent of the number of hierarchical levels and is a function of the canopy structure at the macro-scale such as tree spatial distribution, crown shape and size, within-crown foliage density and ground cover. These properties allow for the natural

  11. Impact of Canopy Openness on Spider Communities: Implications for Conservation Management of Formerly Coppiced Oak Forests.

    Science.gov (United States)

    Košulič, Ondřej; Michalko, Radek; Hula, Vladimír

    2016-01-01

    Traditional woodland management created a mosaic of differently aged patches providing favorable conditions for a variety of arthropods. After abandonment of historical ownership patterns and traditional management and the deliberate transformation to high forest after World War II, large forest areas became darker and more homogeneous. This had significant negative consequences for biodiversity. An important question is whether even small-scale habitat structures maintained by different levels of canopy openness in abandoned coppiced forest may constitute conditions suitable for forest as well as open habitat specialists. We investigated the effect of canopy openness in former traditionally coppiced woodlands on the species richness, functional diversity, activity density, conservation value, and degree of rareness of epigeic spiders. In each of the eight studied locations, 60-m-long transect was established consisting of five pitfall traps placed at regular 15 m intervals along the gradient. Spiders were collected from May to July 2012. We recorded 90 spider species, including high proportions of xeric specialists (40%) and red-listed threatened species (26%). The peaks of conservation indicators, as well as spider community abundance, were shifted toward more open canopies. On the other hand, functional diversity peaked at more closed canopies followed by a rapid decrease with increasing canopy openness. Species richness was highest in the middle of the canopy openness gradient, suggesting an ecotone effect. Ordinations revealed that species of conservation concern tended to be associated with sparse and partly opened canopy. The results show that the various components of biodiversity peaked at different levels of canopy openness. Therefore, the restoration and suitable forest management of such conditions will retain important diversification of habitats in formerly coppiced oak forest stands. We indicate that permanent presence of small-scale improvements

  12. Canopy structural alterations to nitrogen functions of the soil microbial community in a Quercus virginiana forest

    Science.gov (United States)

    Moore, L. D.; Van Stan, J. T., II; Rosier, C. L.; Gay, T. E.; Wu, T.

    2014-12-01

    Forest canopy structure controls the timing, amount and chemical character of precipitation supply to soils through interception and drainage along crown surfaces. Yet, few studies have examined forest canopy structural connections to soil microbial communities (SMCs), and none have measured how this affects SMC N functions. The maritime Quercus virginiana Mill. (southern live oak) forests of St Catherine's Island, GA, USA provide an ideal opportunity to examine canopy structural alterations to SMCs and their functioning, as their throughfall varies substantially across space due to dense Tillandsia usneoides L. (spanish moss) mats bestrewn throughout. To examine the impact of throughfall variability on SMC N functions, we examined points along the canopy coverage continuum: large canopy gaps (0%), bare canopy (50-60%), and canopy of heavy T. usneoides coverage (>=85%). Five sites beneath each of the canopy cover types were monitored for throughfall water/ions and soil leachates chemistry for one storm each month over the growing period (7 months, Mar-2014 to Sep-2014) to compare with soil chemistry and SMC communities sampled every two months throughout that same period (Mar, May, Jul, Sep). DGGE and QPCR analysis of the N functioning genes (NFGs) to characterize the ammonia oxidizing bacterial (AOB-amoA), archaea (AOA-amoA), and ammonification (chiA) communities were used to determine the nitrification and decomposition potential of these microbial communities. PRS™-probes (Western Ag Innovations Inc., Saskatoon, Canada) were then used to determine the availability of NO3-N and NH4+N in the soils over a 6-week period to evaluate whether the differing NFG abundance and community structures resulted in altered N cycling.

  13. The estimation of canopy attributes from digital cover photography by two different image analysis methods

    OpenAIRE

    Chianucci F; Chiavetta U; Cutini A

    2014-01-01

    Proximal sensing methods using digital photography have gained wide acceptance for describing and quantifying canopy properties. Digital hemispherical photography (DHP) is the most widely used photographic technique for canopy description. However, the main drawbacks of DHP have been the tedious and time-consuming image processing required and the sensitivity of the results to the image analysis methods. Recently, an alternative approach using vertical photography has been proposed, namely, d...

  14. A Study of Ultrasonic Sensors to Intelligent Estimation of Tree Canopy Volumes

    OpenAIRE

    Eskandari, M.; A Hosainpour

    2016-01-01

    Many research projects have been conducted about using ultrasonic sensors to estimate canopy volume. This study investigates using software applications such as artificial neural network (ANN) to improve the estimation of canopy volume by using ultrasonic sensors. A special experimental system was built. The system had three ultrasonic sensors mounted vertically on a wooden pole with an equal distance of 0.6 m. As the wooden pole moves with a constant speed, the ultrasonic sensors measure the...

  15. Prototype of a Side-row Continuous Canopy Shaking Harvester for Intensive Olive Orchards

    OpenAIRE

    Peça, José; Dias, António; Cardoso, Vitor; Souza, Domingos; Falcão, José; Pinheiro, Anacleto

    2013-01-01

    Olive producing countries worldwide invested largely in high density groves varying from 200 to 550 trees per hectare for which no efficient totally mechanized harvesting methodology and technology is available. Trunk shaking is not an adequate option due to lack of space and intense strain in labour and machinery. Continuous canopy shaking is the obvious approach, not only increasing working capacity but also overcoming the problem of scarce and expensive labour. Continuous canopy sha...

  16. Thermal canopy photography in forestry - an alternative to optical cover photography

    Directory of Open Access Journals (Sweden)

    Nölke N

    2015-02-01

    Full Text Available Hemispherical canopy photography is a widely used technique to observe crown-related forest variables. However, standardization of this technique remains challenging, as exposure and threshold settings continue to constitute the main sources of variation of such photographs. This paper, therefore, presents a new method to overcome standardization issues by using thermal canopy photography. With a thermal camera, images are produced which are not critically limited in their dynamic range so that photographic exposure becomes irrelevant. Moreover, the high temperature contrast between “sky” and “non-sky”, resulting from extreme low sky temperatures, facilitates the unambiguous selection of a threshold which separates “sky” from “non-sky” pixels. For our comparison, we have taken canopy images with a high-resolution thermal camera (VarioCam hr head [Infratec, Dresden, Germany] and an optical camera (Nikon D70s. The correlation of canopy closure values derived from the image pairs was r = 0.98. Our findings thus show that thermal canopy photography is a promising and simple to use alternative to optical canopy photography, because it limits possible sources of variability, since exposure settings and threshold definition cease to be an issue.

  17. Simulating canopy stomatal conductance of winter wheat and its distribution using remote sensing information

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The canopy stomatal movement, a plant physiological process, generally occurs within leaves but its influence on exchange of CO2, water vapor, and sensible heat fluxes between atmosphere and terrestrial ecosystem. Many studies have documentedthat the interaction between leaf photosynthesis and canopy stomatal conductance is obvious. Thus, information on stomatal conductance is valuable in climate and ecosystem models. In curren study, a newly developed model was adopted to calculate canopy stomatal conductance of winter wheat in Huang-Huai-Hai (H-H-H) Plain of China (31.5-42.7, 110.0-123.0). The remote sensing information from NOAA-AVHRR and meteorological observed data were used to estimate regional scale stomatal conductance distribution. Canopy stomatal conductance distribution pattern of winter wheat onMarch 18, 1997 was also presented. The developed canopy stomatalconductance model might be used to estimate canopy stomatal conductance in land surface schemes and seems can be acted as a boundary condition in regional climatic model runs.

  18. Soil types and forest canopy structures in southern Missouri: A first look with AIS data

    Science.gov (United States)

    Green, G. M.; Arvidson, R. E.

    1986-01-01

    Spectral reflectance properties of deciduous oak-hickory forests covering the eastern half of the Rolla Quadrangle were examined using Thematic Mapper (TM) data acquired in August and December, 1982 and Airborne Imaging Spectrometer (AIS) data acquired in August, 1985. For the TM data distinctly high relative reflectance values (greater than 0.3) in the near infrared (Band 4, 0.73 to 0.94 micrometers) correspond to regions characterized by xeric (dry) forests that overlie soils with low water retention capacities. These soils are derived primarily from rhyolites. More mesic forests characterized by lower TM band 4 relative reflectances are associated with soils of higher retention capacities derived predominately from non-cherty carbonates. The major factors affecting canopy reflectance appear to be the leaf area index (LAI) and leaf optical properties. The Suits canopy reflectance model predicts the relative reflectance values for the xeric canopies. The mesic canopy reflectance is less well matched and incorporation of canopy shadowing caused by the irregular nature of the mesic canopy may be necessary. Preliminary examination of high spectral resolution AIS data acquired in August of 1985 reveals no more information than found in the broad band TM data.

  19. Canopy Density Mapping on Ultracam-D Aerial Imagery in Zagros Woodlands, Iran

    Science.gov (United States)

    Erfanifard, Y.; Khodaee, Z.

    2013-09-01

    Canopy density maps express different characteristics of forest stands, especially in woodlands. Obtaining such maps by field measurements is so expensive and time-consuming. It seems necessary to find suitable techniques to produce these maps to be used in sustainable management of woodland ecosystems. In this research, a robust procedure was suggested to obtain these maps by very high spatial resolution aerial imagery. It was aimed to produce canopy density maps by UltraCam-D aerial imagery, newly taken in Zagros woodlands by Iran National Geographic Organization (NGO), in this study. A 30 ha plot of Persian oak (Quercus persica) coppice trees was selected in Zagros woodlands, Iran. The very high spatial resolution aerial imagery of the plot purchased from NGO, was classified by kNN technique and the tree crowns were extracted precisely. The canopy density was determined in each cell of different meshes with different sizes overlaid on the study area map. The accuracy of the final maps was investigated by the ground truth obtained by complete field measurements. The results showed that the proposed method of obtaining canopy density maps was efficient enough in the study area. The final canopy density map obtained by a mesh with 30 Ar (3000 m2) cell size had 80% overall accuracy and 0.61 KHAT coefficient of agreement which shows a great agreement with the observed samples. This method can also be tested in other case studies to reveal its capability in canopy density map production in woodlands.

  20. Implementation of spaceborne lidar-retrieved canopy height in the WRF model

    Science.gov (United States)

    Lee, Junhong; Hong, Jinkyu

    2016-06-01

    Canopy height is closely related to biomass and aerodynamic properties, which regulate turbulent transfer of energy and mass at the soil-vegetation-atmosphere continuum. However, this key information has been prescribed as a constant value in a fixed plant functional type in atmospheric models. This paper is the first to report impacts of using realistic forest canopy height, retrieved from spaceborne lidar, on regional climate simulation by using the canopy height data in the Weather Research and Forecasting (WRF) model's land surface model. Numerical simulations were conducted over the Amazon Basin during summer season. Over this region, the lidar-retrieved canopy heights were higher than the default values used in the WRF, which are dependent only on plant functional type. By modifying roughness length and zero-plane displacement height, the change of canopy height resulted in changes in surface energy balance by regulating aerodynamic conductances and vertical temperature gradient, thus modifying the lifting condensation level and equivalent potential temperature in the atmospheric boundary layer. Our analysis also showed that the WRF model better reproduced the observed precipitation when lidar-retrieved canopy height was used over the Amazon Basin.

  1. Canopy induced aberration correction in airborne electro-optical imaging systems

    Science.gov (United States)

    Harder, James A.; Sprague, Michaelene W.

    2011-11-01

    An increasing number of electro-optical systems are being used by pilots in tactical aircraft. This means that the afore mentioned systems must operate through the aircrafts canopy, unfortunately the canopy functions as a less than ideal lens element in the electro-optical sensor optical path. The canopy serves first and foremost as an aircraft structural component, considerations like minimizing the drag co-efficient and the ability to survive bird strikes take precedence over achieving optimal optical characteristics. This paper describes how the authors characterized the optical characteristics of an aircraft canopy. Families of modulation transfer functions were generated, for various viewing geometries through the canopy and for various electro-optical system entrance pupil diameters. These functions provided us with the means to significantly reduce the effect of the canopy "lens" on the performance of a representative electro-optical system, using an Astigmatic Corrector Lens. A comparison of the electro-optical system performance with and without correction is also presented.

  2. The estimation of canopy attributes from digital cover photography by two different image analysis methods

    Directory of Open Access Journals (Sweden)

    Chianucci F

    2014-08-01

    Full Text Available Proximal sensing methods using digital photography have gained wide acceptance for describing and quantifying canopy properties. Digital hemispherical photography (DHP is the most widely used photographic technique for canopy description. However, the main drawbacks of DHP have been the tedious and time-consuming image processing required and the sensitivity of the results to the image analysis methods. Recently, an alternative approach using vertical photography has been proposed, namely, digital cover photography (DCP. The method captures detailed vertical canopy gaps and performs canopy analysis by dividing gap fractions into large between-crown gaps and small within- crown gaps. Although DCP is a rapid, simple and readily available method, the processing steps involved in gap fraction analysis have a large subjective component by default. In this contribution, we propose an alternative simple, more objective and easily implemented procedure to perform gap fraction analysis of DCP images. We compared the performance of the two image analysis methods in dense deciduous forests. Leaf area index (LAI estimates from the two image analysis methods were compared with reference LAI measurements obtained through the use of litter traps to measure leaf fall. Both methods provided accurate estimates of the total gap fraction and, thus, accurate estimates of the LAI. The new proposed procedure is recommended for dense canopies because the subjective classification of large gaps is most error-prone in stands with dense canopy cover.

  3. Relationship Between Canopy Temperature at Flowering Stage and Soil Water Content, Yield Components in Rice

    Institute of Scientific and Technical Information of China (English)

    ZHANG Wen-zhong; HAN Ya-dong; DU Hong-juan

    2007-01-01

    The canopy temperature of rice at the flowering stage and the soil water content were investigated under different soil water treatments (the soil water contents were 24%, 55%, 90% and 175% at the flowering stage). The canopy temperature was lower than air temperature, and the soil water content significantly influenced the canopy temperature. The lower the soil water content, the higher the canopy temperature, the less the accumulative absolute value of canopy-air temperature difference. Moreover, the maximum difference between treatments and CK in the accumulative absolute value of canopy-air temperature difference appeared at 13:00 p.m. in a day, thus, it could be considered as a suitable measuring time. Under the lowest water content treatment, the peak flowering occurred in the first three days (about 70% of panicles flowered), resulting in shortened and lightened panicle of rice. As to the CK and the high water content treatments, the peak flowering appeared in the middle of flowering duration, with longer panicle length and higher panicle weight. Results indicated the lower the soil water content, the less the filled grain number and grain yield.

  4. Assessment of Light Environment Variability in Broadleaved Forest Canopies Using Terrestrial Laser Scanning

    Directory of Open Access Journals (Sweden)

    Dimitry Van der Zande

    2010-06-01

    Full Text Available Light availability inside a forest canopy is of key importance to many ecosystem processes, such as photosynthesis and transpiration. Assessment of light availability and within-canopy light variability enables a more detailed understanding of these biophysical processes. The changing light-vegetation interaction in a homogeneous oak (Quercus robur L. stand was studied at different moments during the growth season using terrestrial laser scanning datasets and ray tracing technology. Three field campaigns were organized at regular time intervals (24 April 2008; 07 May 2008; 23 May 2008 to monitor the increase of foliage material. The laser scanning data was used to generate 3D representations of the forest stands, enabling structure feature extraction and light interception modeling, using the Voxel-Based Light Interception Model (VLIM. The VLIM is capable of estimating the relative light intensity or Percentage of Above Canopy Light (PACL at any arbitrary point in the modeled crown space. This resulted in a detailed description of the dynamic light environments inside the canopy. Mean vertical light extinction profiles were calculated for the three time frames, showing significant differences in light attenuation by the canopy between April 24 on the one hand, and May 7 and May 23 on the other hand. The proposed methodology created the opportunity to link these within-canopy light distributions to the increasing amount of photosynthetically active leaf material and its distribution in the considered 3D space.

  5. The influence of shrub canopies on soil temperatures across northern Canada

    Science.gov (United States)

    Myers-Smith, Isla; Lévesque, Esther; Grogan, Paul; Lantz, Trevor

    2013-04-01

    Shrub species are the largest plant life form in tundra ecosystems; therefore, changes in the abundance of shrubs will likely create feedbacks to influence biodiversity, ecosystem function and climate. Shrub canopies have been hypothesized to influence ground temperatures by trapping snow in winter and shading soils in summer. However, generalizable relationships have yet to be identified among species, soil types and regions. We present data from seven shrub tundra sites in the Yukon, Northwest Territories and Northern Quebec. Summer soil temperatures were often cooler under shrub canopies; however, there was no clear relationship with canopy height. In contrast, we found a significant positive relationship between canopy height and winter soil temperatures. The difference in the minimum winter soil temperatures at 5 cm depth under shrub versus open tundra was ~1°C greater for every additional 10cm of canopy height, despite differences in air temperatures, snow pack, soil characteristics and species composition between sites. Our results highlight the important influence of canopy cover on soil temperatures. By combining data in this manner across regions, we will be able to better estimate the relative magnitude of positive and negative feedbacks of shrub increases to climate warming and thus will improve estimates of future vegetation change and permafrost stability.

  6. Habitat use by the endangered Karner blue butterfly in oak woodlands: The influence of canopy cover

    Science.gov (United States)

    Grundel, Ralph; Pavlovic, Noel B.; Sulzman, Christina L.

    1998-01-01

    The Karner blue butterfly Lycaeides melissa samuelis is an endangered species residing in the Great Lakes and northeastern regions of the United States. Increased canopy cover is a major factor implicated in the decline of the Karner blue at many locales. Therefore, we examined how the butterfly's behavior varied with canopy cover. Adult males at Indiana Dunes National Lakeshore used habitat under canopy openings for nearly 90% of their activities; females used openings and shaded areas more equally. The frequency of oviposition on the sole host plant, wild lupine Lupinus perennis, was highest under 30–60% canopy cover even though lupine was more abundant in more open areas. Larvae fed preferentially on larger lupine plants and on lupines in denser patches. However, lupines were generally larger in the shade. Therefore, shade-related trade-offs existed between lupine abundance and distribution of larval feeding and oviposition. Also, heterogeneity of shading by sub-canopy woody vegetation was greater at oviposition sites than at sites where lupine did not grow. Given the importance of shade heterogeneity, a mixture of canopy openings and shade, on a scale similar to daily adult movement range, should be beneficial for this butterfly.

  7. Specifics of soil temperature under winter oilseed rape canopy

    Science.gov (United States)

    Krčmářová, Jana; Středa, Tomáš; Pokorný, Radovan

    2014-09-01

    The aim of this study was to evaluate the course of soil temperature under the winter oilseed rape canopy and to determine relationships between soil temperature, air temperature and partly soil moisture. In addition, the aim was to describe the dependence by means of regression equations usable for pests and pathogens prediction, crop development, and yields models. The measurement of soil and near the ground air temperatures was performed at the experimental field Žabiče (South Moravia, the Czech Republic). The course of temperature was determined under or in the winter oilseed rape canopy during spring growth season in the course of four years (2010 - 2012 and 2014). In all years, the standard varieties (Petrol, Sherpa) were grown, in 2014 the semi-dwarf variety PX104 was added. Automatic soil sensors were positioned at three depths (0.05, 0.10 and 0.20 m) under soil surface, air temperature sensors in 0.05 m above soil surfaces. The course of soil temperature differs significantly between standard (Sherpa and Petrol) and semi-dwarf (PX104) varieties. Results of the cross correlation analysis showed, that the best interrelationships between air and soil temperature were achieved in 2 hours delay for the soil temperature in 0.05 m, 4 hour delay for 0.10 m and 7 hour delay for 0.20 m for standard varieties. For semi-dwarf variety, this delay reached 6 hour for the soil temperature in 0.05 m, 7 hour delay for 0.10 m and 11 hour for 0.20 m. After the time correction, the determination coefficient (R2) reached values from 0.67 to 0.95 for 0.05 m, 0.50 to 0.84 for 0.10 m in variety Sherpa during all experimental years. For variety PX104 this coefficient reached values from 0.51 to 0.72 in 0.05 m depth and from 0.39 to 0.67 in 0.10 m depth in the year 2014. The determination coefficient in the 0.20 m depth was lower for both varieties; its values were from 0.15 to 0.65 in variety Sherpa. In variety PX104 the values of R2 from 0.23 to 0.57 were determined. When using

  8. Canopy Level Solar Induced Fluorescence for Vegetation in Controlled Experiments

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Campbell, P. K. Entcheva

    2007-01-01

    Solar induced chlorophyll fluorescence (SIF) was retrieved from high resolution reflectance spectra acquired one meter above saplings of three deciduous tree species during springtime (three weeks after leaf flush) and in late summer when foliage was mature. SIF was determined by application of the Fraunhofer Line Depth (FLD) Principal to above-canopy spectra acquired with an Analytical Spectral Devices (ASD) Fieldspec spectroradiometer (3.2 nm resolution with 1.2 nm sampling interval). SIF retrievals were made at the two atmospheric oxygen (O2) absorption features that occur in the chlorophyll fluorescence (ChlF) region (660 -780 nm). These telluric features are 02V, the broader and deeper feature centered at 760 nm, but located on the shoulder of the far-red ChlF peak at 740 nm; and 023, a narrow feature centered at 688 nm that is positioned near the red ChlF peak at 685 nm. Supporting, coincident leaf level fluorescence, reflectance, photochemical and other measurements were also made. At the leaf level, these measurements included in situ photosynthetic capacity (Pmax) and light adapted total chlorophyll fluorescence (Fs') collected at steady state under high light and controlled chamber conditions (e.g., temperature, PAR, humidity, and COz); optical properties (reflectance, transmittance, absorptance); chlorophyll and carotenoid content; specific leaf mass; carbon (C) and nitrogen (N) content; fluorescence emission spectra at multiple excitation wavelengths; the ChlF contribution to red (R) and far-red (FR) reflectance; fluorescence imagery; and fluorescence excitation-emission matrices (EEMs). The tree species examined were tulip poplar (Liriodendron tulipifera L.), red maple (Acer rubrum L.), and sweetgum (Liquidambar styraczflua L.), and each had been provided four levels of N augmentation (0, 19, 37, and 75 kg Nhectare seasonally) to simulate atmospheric deposition from air pollution. Whole-plant SIF measurements of these species were compared with SIF

  9. Missing Peroxy Radical Sources Within a Rural Forest Canopy

    Science.gov (United States)

    Wolfe, G. M.; Cantrell, C.; Kim, S.; Mauldin, R. L., III; Karl, T.; Harley, P.; Turnipseed, A.; Zheng, W.; Flocke, F.; Apel, E. C.; Hornbrook, R. S.; Hall, S. R.; Ullmann, K.; Henry, S. B.; DiGangi, J. P.; Boyle, E. S.; Kaser, L.; Schnitzhofer, R.; Hansel, A.; Graus, M.; Nakashima, Y.; Kajii, Y.; Guenther, A.; Keutsch, F. N.

    2013-01-01

    Organic peroxy (RO2) and hydroperoxy (HO2) radicals are key intermediates in the photochemical processes that generate ozone, secondary organic aerosol and reactive nitrogen reservoirs throughout the troposphere. In regions with ample biogenic hydrocarbons, the richness and complexity of peroxy radical chemistry presents a significant challenge to current-generation models, especially given the scarcity of measurements in such environments. We present peroxy radical observations acquired within a Ponderosa pine forest during the summer 2010 Bio-hydro-atmosphere interactions of Energy, Aerosols, Carbon, H2O, Organics and Nitrogen - Rocky Mountain Organic Carbon Study (BEACHON-ROCS). Total peroxy radical mixing ratios reach as high as 180 pptv and are among the highest yet recorded. Using the comprehensive measurement suite to constrain a near-explicit 0-D box model, we investigate the sources, sinks and distribution of peroxy radicals below the forest canopy. The base chemical mechanism underestimates total peroxy radicals by as much as a factor of 3. Since primary reaction partners for peroxy radicals are either measured (NO) or under-predicted (HO2 and RO2, i.e. self-reaction), missing sources are the most likely explanation for this result. A close comparison of model output with observations reveals at least two distinct source signatures. The first missing source, characterized by a sharp midday maximum and a strong dependence on solar radiation, is consistent with photolytic production of HO2. The diel profile of the second missing source peaks in the afternoon and suggests a process that generates RO2 independently of sun-driven photochemistry, such as ozonolysis of reactive hydrocarbons. The maximum magnitudes of these missing sources (approximately 120 and 50 pptv min-1, respectively) are consistent with previous observations alluding to unexpectedly intense oxidation within forests. We conclude that a similar mechanism may underlie many such observations.

  10. Bromeliad catchments as habitats for methanogenesis in tropical rainforest canopies

    Directory of Open Access Journals (Sweden)

    Shana K. Goffredi

    2011-12-01

    Full Text Available Tropical epiphytic plants within the family Bromeliaceae are unusual in that they possess foliage capable of retaining water and impounded material. This creates an acidic (pH 3.5-6.5 and anaerobic (< 1 ppm O2 environment suspended in the canopy. Results from a Costa Rican rainforest show that most bromeliads (n = 75/86 greater than ~20 cm in plant height or ~4-5 cm tank depth, showed presence of methanogens within the lower anoxic horizon of the tank. Archaea were dominated by methanogens (77-90% of recovered ribotypes and community structure, although variable, was generally comprised of a single type, closely related to either hydrogenotrophic Methanoregula or Methanocella, a specific clade of aceticlastic Methanosaeta, or Methanosarcina. Juvenile bromeliads, or those species, such as Guzmania, with shallow tanks, generally did not possess methanogens, as assayed by PCR specific for methanogen 16S rRNA genes, nor did artificial catchments (~ 100 ml volume, in place 6-12 months prior to sample collection. Methanogens were not detected in soil (n = 20, except in one case, in which the dominant ribotype was different from nearby bromeliads. Recovery of methyl coenzyme M reductase genes supported the occurrence of hydrogenotrophic and aceticlastic methanogens within bromeliad tanks, as well as the trend, via QPCR analysis of mcrA, of increased methanogenic capacity with increased plant height. Methane production rates of up to 300 nmol CH4 ml tank water -1 day-1 were measured in microcosm experiments. These results suggest that bromeliad-associated archaeal communities may play an important role in the cycling of carbon in neotropical forests.

  11. Temporal patterns of thermal emission directionality of crop canopies

    Science.gov (United States)

    Huang, Huaguo; Liu, Qinhuo; Qin, Wenhan; Du, Yongming; Li, Xiaowen

    2011-03-01

    Many field experiments have observed significant temporal variations of thermal infrared (TIR) emission directionality, making it necessary to explain this phenomenon quantitatively to exploit potential applications of the directional remotely sensed TIR observation. The main objective of this paper is to determine when and how the significant directional effect appears. Two models, TRGM and Cupid, are linked to simulate the temporal variations of directional brightness temperature TB(θ) of crop canopies, including winter wheat and summer corn. Two indicators are defined: (1) ΔTB,AVG representing the mean difference between nadir TB(0) and off-nadir TB(55) and (2) ΔTB,STD representing the standard deviation of TB(55) for different view azimuth angles. Simulation results show that the highest ΔTB,AVG of up to 4°C appears mostly at midday (1200-1300 LT), while the lowest ΔTB,AVG appears mostly in the early morning (0700-0800 LT) or late afternoon (1700-1800 LT). The ΔTB,STD is about one third of ΔTB,AVG and should not be neglected given its considerable value at around 1400 LT. This trend has been proven through field measurements at both wheat and corn sites. The major factors affecting the trend are also identified using sensitivity analysis. Among the major factors, soil water content, LAI, and solar radiation are the three most significant factors, whereas the wind speed and air temperature have a larger effect on ΔTB,AVG than air humidity. It is interesting that ΔTB,AVG reaches a maximum value when the LAI is around 0.8. Further analysis shows that ΔTB,AVG is related to soil surface net radiation, which will be useful in net radiation estimation.

  12. Quantitative detection of settled dust over green canopy

    Science.gov (United States)

    Brook, Anna

    2016-04-01

    The main task of environmental and geoscience applications are efficient and accurate quantitative classification of earth surfaces and spatial phenomena. In the past decade, there has been a significant interest in employing hyperspectral unmixing in order to retrieve accurate quantitative information latent in hyperspectral imagery data. Recently, the ground-truth and laboratory measured spectral signatures promoted by advanced algorithms are proposed as a new path toward solving the unmixing problem of hyperspectral imagery in semi-supervised fashion. This paper suggests that the sensitivity of sparse unmixing techniques provides an ideal approach to extract and identify dust settled over/upon green vegetation canopy using hyperspectral airborne data. Atmospheric dust transports a variety of chemicals, some of which pose a risk to the ecosystem and human health (Kaskaoutis, et al., 2008). Many studies deal with the impact of dust on particulate matter (PM) and atmospheric pollution. Considering the potential impact of industrial pollutants, one of the most important considerations is the fact that suspended PM can have both a physical and a chemical impact on plants, soils, and water bodies. Not only can the particles covering surfaces cause physical distortion, but particles of diverse origin and different chemistries can also serve as chemical stressors and cause irreversible damage. Sediment dust load in an indoor environment can be spectrally assessed using reflectance spectroscopy (Chudnovsky and Ben-Dor, 2009). Small amounts of particulate pollution that may carry a signature of a forthcoming environmental hazard are of key interest when considering the effects of pollution. According to the most basic distribution dynamics, dust consists of suspended particulate matter in a fine state of subdivision that are raised and carried by wind. In this context, it is increasingly important to first, understand the distribution dynamics of pollutants, and

  13. Exploring the Effects of Microscale Structural Heterogeneity of Forest Canopies Using Large-Eddy Simulations

    Science.gov (United States)

    Bohrer, Gil; Katul, Gabriel G.; Walko, Robert L.; Avissar, Roni

    2009-09-01

    The Regional Atmospheric Modeling System (RAMS)-based Forest Large-Eddy Simulation (RAFLES), developed and evaluated here, is used to explore the effects of three-dimensional canopy heterogeneity, at the individual tree scale, on the statistical properties of turbulence most pertinent to mass and momentum transfer. In RAFLES, the canopy interacts with air by exerting a drag force, by restricting the open volume and apertures available for flow (i.e. finite porosity), and by acting as a heterogeneous source of heat and moisture. The first and second statistical moments of the velocity and flux profiles computed by RAFLES are compared with turbulent velocity and scalar flux measurements collected during spring and winter days. The observations were made at a meteorological tower situated within a southern hardwood canopy at the Duke Forest site, near Durham, North Carolina, U.S.A. Each of the days analyzed is characterized by distinct regimes of atmospheric stability and canopy foliage distribution conditions. RAFLES results agreed with the 30-min averaged flow statistics profiles measured at this single tower. Following this intercomparison, two case studies are numerically considered representing end-members of foliage and midday atmospheric stability conditions: one representing the winter season with strong winds above a sparse canopy and a slightly unstable boundary layer; the other representing the spring season with a dense canopy, calm conditions, and a strongly convective boundary layer. In each case, results from the control canopy, simulating the observed heterogeneous canopy structure at the Duke Forest hardwood stand, are compared with a test case that also includes heterogeneity commensurate in scale to tree-fall gaps. The effects of such tree-scale canopy heterogeneity on the flow are explored at three levels pertinent to biosphere-atmosphere exchange. The first level (zero-dimensional) considers the effects of such heterogeneity on the common

  14. Fossil Leaves and Fossil Leaf n-Alkanes: Reconstructing the First Closed Canopied Rainforests

    Science.gov (United States)

    Graham, H. V.; Freeman, K. H.

    2013-12-01

    Although the age and location is disputed, the rise of the first closed-canopy forest is likely linked with the expansion of angiosperms in the late Cretacous or early Cenozoic. The carbon isotope 'canopy effect' reflects the extent of canopy closure, and is well documented in δ13C values of the leaves and leaf lipids in modern forests. To test the extent of canopy closure among the oldest documented angiosperm tropical forests, we analyzed isotopic characteristics of leaf fossils and leaf waxes from the Guaduas and Cerrejón Formations. The Guaduas Fm. (Maastrichtian) contains some of the earliest angiosperm fossils in the Neotropics, and both leaf morphology and pollen records at this site suggest an open-canopy structure. The Cerrejón Fm. (Paleocene) contains what are believed to be the first recorded fossil leaves from a closed-canopy forest. We analyzed the bulk carbon isotope content (δ13Cleaf) of 199 fossil leaves, as well as the n-alkane concentration and chain-length distribution, and δ13C of alkanes (δ13Clipid) of 73 fossil leaves and adjacent sediment samples. Fossil leaves are dominated by eudicots and include ten modern plant families (Apocynaceae, Bombaceae, Euphorbaceae, Fabaceae, Lauraceae, Malvaceae, Meliaceae, Menispermaceae, Moraceae, Sapotaceae). We interpreted extent of canopy coverage based on the range of δ13Cleaf values. The narrow range of δ13C values in leaves from the Guaduas Fm (2.7‰) is consistent with an open canopy. A significantly wider range in values (6.3‰) suggests a closed-canopy signature for site 0315 of the Cerrejón Fm,. In contrast, at Site 0318, a lacustrine deposit, leaves had a narrow range (3.3‰) in δ13C values, and this is not consistent with a closed-canopy, but is consistent with leaf assemblages from a forest edge. Leaves that accumulate in lake sediments tend to be biased toward plants living at the lake edge, which do not experience closed-canopy conditions, and do not express the isotopic

  15. [Characteristics of canopy structure of super high yielding japonica hybrid rice community].

    Science.gov (United States)

    Chen, Jinhong; Zhang, Guoping; Guo, Hengde; Mao, Guojuan

    2003-06-01

    In this paper, the characteristics of canopy structure, such as the numbers of seedling, panicle and grain, the distribution of dry matters in different canopy layers and different organs, and the distributions of LAI and of solar radiation in different canopy layers of super high yielding community of japonica hybrid rice were studied, in comparison with normal japonica rice. The results showed that the total the dry matter weight and the dry matter weight of layers below 40 cm, 40-60 cm, 60-80 cm and above 80 cm of japonica hybrid rice canopy were 32.29%, 29.12%, 13.95%, 16.45% and 100.17% higher those that of normal japonica rice, respectively. The ratios of dry leaf (photosynthetic organ) and of dry panicle (sink organ) weight to total dry weight were 24.8% and 12.8%, respectively, which were greater than those of normal japonica rice, while the ratios of dry sheath and stem (storage organs) weight were 33.6% and 28.9%, respectively, which were lower than those of normal japonica rice. The allotment of LAI in different layers of japonica hybrid rice canopy was reasonable, and the LAI of above 40 cm layer at full heading stage reached 5.44. The solar radiation was well-distributed inside japonica hybrid rice canopy, for example, the solar radiation in layers below 60 cm were 13.1%-37.0% higher, but 5.9%-12.2% lower above 60 cm than that of normal japonica rice. The extinction coefficients of solar radiation in layers below 20 cm, 20-40 cm, 40-60 cm and 60-80 cm of japonica hybrid rice canopy were 35.1%, 13.5%, 29.1% and 17.2% lower than that of normal japonica rice, respectively.

  16. Contrasting effects of sampling scale on insect herbivores distribution in response to canopy structure.

    Science.gov (United States)

    Neves, Frederico S; Sperber, Carlos F; Campos, Ricardo I; Soares, Janaína P; Ribeiro, Sérvio P

    2013-03-01

    Species diversity of insect herbivores associated to canopy may vary local and geographically responding to distinct factors at different spatial scales. The aim of this study was to investigate how forest canopy structure affects insect herbivore species richness and abundance depending on feeding guilds' specificities. We tested the hypothesis that habitat structure affects insect herbivore species richness and abundance differently to sap-sucking and chewing herbivore guilds. Two spatial scales were evaluated: inside tree crowns (fine spatial cale) and canopy regions (coarse spatial scale). In three sampling sites we measured 120 tree crowns, grouped n five points with four contiguous tree crowns. Insects were sampled by beating method from each crown and data were summed up for analyzing each canopy region. In crowns (fine spatial scale) we measured habitat tructure: trunk circumference, tree height, canopy depth, number of ramifications and maximum ramification level. In each point, defined as a canopy region (coarse spatial scale), we measured habitat structure using a vertical cylindrical transect: tree species richness, leaf area, sum of strata heights and maximum canopy height. A principal component analysis based on the measured variables for each spatial scale was run to estimate habitat structure parameters. To test the effects of habitat structure upon herbivores, different general linear models were adjusted using the first two principal components as explanatory variables. Sap-sucking insect species richness and all herbivore abundances increased with size of crown at fine spatial scale. On the other hand, chewer species richness and abundance increased with resource quantity at coarse scale. Feeding specialization, resources availability, and agility are discussed as ecological causes of the found pattern.

  17. Mapping Vegetation Canopy Structure and Distribution for Great Smoky Mountains National Park Using LiDAR

    Science.gov (United States)

    Weiner, J.; Kumar, J.; Norman, S. P.

    2015-12-01

    A major challenge in forest management is the inaccessibility of large swaths of land, which makes accurate monitoring of forest change difficult. Remote sensing methods can help address this issue by allowing investigators to monitor remote or inaccessible regions using aerial or satellite-based platforms. However, most remote sensing methods do not provide a full three-dimensional (3D) description of the area. Rather, they return only a single elevation point or landcover description. Multiple-return LiDAR (Light Detection and Ranging) gathers data in a 3D point cloud, which allows forest managers to more accurately characterize and monitor changes in canopy structure and vegetation-type distribution. Our project used high-resolution aerial multiple-return LiDAR data to determine vegetation canopy structures and their spatial distribution in Great Smoky Mountains National Park. To ensure sufficient data density and to match LANDSAT resolution, we gridded the data into 30m x 30m cells. The LiDAR data points within each cell were then used to generate the vertical canopy structure for that cell. After vertical profiles had been created, we used a k-means cluster analysis algorithm to classify the landscape based on the canopy structure. The spatial distribution of distinct and unique canopy structures was mapped across the park and compared to a vegetation-type map to determine the correlation of canopy structure to vegetation types. Preliminary analysis conducted at a number of phenology sites maintained by the Great Smoky Mountains Institute at Tremont shows strong correspondence between canopy structure and vegetation type. However, more validation is needed in other regions of the park to establish this method as a reliable tool. LiDAR data has a unique ability to map full 3D structures of vegetation and the methods developed in this project offer an extensible tool for forest mapping and monitoring.

  18. Light spatial distribution in the canopy and crop development in cotton.

    Directory of Open Access Journals (Sweden)

    Xiaoyu Zhi

    Full Text Available The partitioning of light is very difficult to assess, especially in discontinuous or irregular canopies. The aim of the present study was to analyze the spatial distribution of photosynthetically active radiation (PAR in a heterogeneous cotton canopy based on a geo-statistical sampling method. Field experiments were conducted in 2011 and 2012 in Anyang, Henan, China. Field plots were arranged in a randomized block design with the main plot factor representing the plant density. There were 3 replications and 6 densities used in every replicate. The six plant density treatments were 15,000, 33,000, 51,000, 69,000, 87,000 and 105,000 plants ha(-1. The following results were observed: 1 transmission within the canopy decreased with increasing density and significantly decreased from the top to the bottom of the canopy, but the greatest decreases were observed in the middle layers of the canopy on the vertical axis and closing to the rows along the horizontal axis; 2 the transmitted PAR (TPAR of 6 different cotton populations decreased slowly and then increased slightly as the leaves matured, the TPAR values were approximately 52.6-84.9% (2011 and 42.7-78.8% (2012 during the early cotton developmental stage, and were 33.9-60.0% (2011 and 34.5-61.8% (2012 during the flowering stage; 3 the Leaf area index (LAI was highly significant exponentially correlated (R(2 = 0.90 in 2011, R(2 = 0.91 in 2012 with the intercepted PAR (IPAR within the canopy; 4 and a highly significant linear correlation (R(2 = 0.92 in 2011, R(2 = 0.96 in 2012 was observed between the accumulated IPAR and the biomass. Our findings will aid researchers to improve radiation-use efficiency by optimizing the ideotype for cotton canopy architecture based on light spatial distribution characteristics.

  19. Germination and establishment of Tillandsia eizii (Bromeliaceae) in the canopy of an oak forest in Chiapas, Mexico

    OpenAIRE

    Toledo-Aceves, T.; Wolf, J.H.D.

    2008-01-01

    We assessed the effectiveness of repopulating the inner canopy and middle canopy of oak trees with seeds and seedlings of the epiphytic bromeliad Tillandsia eizii. Canopy germination was 4.7 percent, considerably lower than in vitro (92%). Of the tree-germinated seedlings, only 1.5 percent survived 6 mo. In contrast, 9.3 percent of transplanted laboratory seedlings survived 15 mo. To repopulate trees, we recommend transplanting laboratory-grown seedlings, as large as practically possible, to ...

  20. Changes in leaf area, nitrogen content and canopy photosynthesis in soybean exposed to an ozone concentration gradient.

    Science.gov (United States)

    Oikawa, Shimpei; Ainsworth, Elizabeth A

    2016-08-01

    Influences of ozone (O3) on light-saturated rates of photosynthesis in crop leaves have been well documented. To increase our understanding of O3 effects on individual- or stand level productivity, a mechanistic understanding of factors determining canopy photosynthesis is necessary. We used a canopy model to scale photosynthesis from leaf to canopy, and analyzed the importance of canopy structural and leaf ecophysiological characteristics in determining canopy photosynthesis in soybean stands exposed to 9 concentrations of [O3] (37-116 ppb; 9-h mean). Light intensity and N content peaked in upper canopy layers, and sharply decreased through the lower canopy. Plant leaf area decreased with increasing [O3] allowing for greater light intensity to reach lower canopy levels. At the leaf level, light-saturated photosynthesis decreased and dark respiration increased with increasing [O3]. These data were used to calculate daily net canopy photosynthesis (Pc). Pc decreased with increasing [O3] with an average decrease of 10% for an increase in [O3] of 10 ppb, and which was similar to changes in above-ground dry mass production of the stands. Absolute daily net photosynthesis of lower layers was very low and thus the decrease in photosynthesis in the lower canopy caused by elevated [O3] had only minor significance for total canopy photosynthesis. Sensitivity analyses revealed that the decrease in Pc was associated with changes in leaf ecophysiology but not with decrease in leaf area. The soybean stands were very crowded, the leaves were highly mutually shaded, and sufficient light for positive carbon balance did not penetrate to lower canopy leaves, even under elevated [O3]. PMID:27261884

  1. Detecting forest canopy layering: applying lidar remote sensing to further understand the role of vertical structure in species habitat preference

    Science.gov (United States)

    Whitehurst, A. S.; Dubayah, R.; Swatantran, A.

    2011-12-01

    Full waveform lidar reflects off all forest canopy elements, showing not only height, but also the structure within the canopy from the top to the forest floor, making it an ideal remote sensing technology for research in forest ecosystem dynamics. Vertical stratification or canopy layering has long been noted as an essential element in the forest ecosystem and of importance for species habitat. This project explores the utility of lidar for characterizing forest canopy layering and applying canopy layering information to better understand species habitat preference. Canopy layering will be mapped across the landscape using full-waveform lidar remote sensing data from the NASA Goddard Space Flight Center Laser Vegetation Imaging Sensor (LVIS). Two methods for quantifying layering have been developed from LVIS data collected during the summer of 2009 for Hubbard Brook Experimental Forest, New Hampshire. The two layering datasets (one categorical, one continuous) describe how vertical stratification varies across the forest with canopy height and elevation. The relationships between of canopy layering and avian species habitat preference will also be assessed for bird species within Hubbard Brook Experimental forest. These results will provide ecologically meaningful information and a relevant method for quantifying canopy layering at the landscape scale, which will aid in a better understanding of forest ecosystem dynamics for forest management and species habitat research.

  2. Testing the Suitability of a Terrestrial 2D LiDAR Scanner for Canopy Characterization of Greenhouse Tomato Crops.

    Science.gov (United States)

    Llop, Jordi; Gil, Emilio; Llorens, Jordi; Miranda-Fuentes, Antonio; Gallart, Montserrat

    2016-01-01

    Canopy characterization is essential for pesticide dosage adjustment according to vegetation volume and density. It is especially important for fresh exportable vegetables like greenhouse tomatoes. These plants are thin and tall and are planted in pairs, which makes their characterization with electronic methods difficult. Therefore, the accuracy of the terrestrial 2D LiDAR sensor is evaluated for determining canopy parameters related to volume and density and established useful correlations between manual and electronic parameters for leaf area estimation. Experiments were performed in three commercial tomato greenhouses with a paired plantation system. In the electronic characterization, a LiDAR sensor scanned the plant pairs from both sides. The canopy height, canopy width, canopy volume, and leaf area were obtained. From these, other important parameters were calculated, like the tree row volume, leaf wall area, leaf area index, and leaf area density. Manual measurements were found to overestimate the parameters compared with the LiDAR sensor. The canopy volume estimated with the scanner was found to be reliable for estimating the canopy height, volume, and density. Moreover, the LiDAR scanner could assess the high variability in canopy density along rows and hence is an important tool for generating canopy maps. PMID:27608025

  3. Regional Estimates of Drought-Induced Tree Canopy Loss across Texas

    Science.gov (United States)

    Schwantes, A.; Swenson, J. J.; González-Roglich, M.; Johnson, D. M.; Domec, J. C.; Jackson, R. B.

    2015-12-01

    The severe drought of 2011 killed millions of trees across the state of Texas. Drought-induced tree-mortality can have significant impacts to carbon cycling, regional biophysics, and community composition. We quantified canopy cover loss across the state using remotely sensed imagery from before and after the drought at multiple scales. First, we classified ~200 orthophotos (1-m spatial resolution) from the National Agriculture Imagery Program, using a supervised maximum likelihood classification. Area of canopy cover loss in these classifications was highly correlated (R2 = 0.8) with ground estimates of canopy cover loss, measured in 74 plots across 15 different sites in Texas. These 1-m orthophoto classifications were then used to calibrate and validate coarser scale (30-m) Landsat imagery to create wall-to-wall tree canopy cover loss maps across the state of Texas. We quantified percent dead and live canopy within each pixel of Landsat to create continuous maps of dead and live tree cover, using two approaches: (1) a zero-inflated beta distribution model and (2) a random forest algorithm. Widespread canopy loss occurred across all the major natural systems of Texas, with the Edwards Plateau region most affected. In this region, on average, 10% of the forested area was lost due to the 2011 drought. We also identified climatic thresholds that controlled the spatial distribution of tree canopy loss across the state. However, surprisingly, there were many local hot spots of canopy loss, suggesting that not only climatic factors could explain the spatial patterns of canopy loss, but rather other factors related to soil, landscape, management, and stand density also likely played a role. As increases in extreme droughts are predicted to occur with climate change, it will become important to define methods that can detect associated drought-induced tree mortality across large regions. These maps could then be used (1) to quantify impacts to carbon cycling and regional

  4. Coastal Applications of the Canopy Biomass Lidar (CBL)

    Science.gov (United States)

    Paynter, I.; Saenz, E.; Peri, F.; Schaaf, C.; Wang, Z.; Erb, A.; Yang, Y.; Rouhani, S.; Liu, Y.; Yang, X.; Chen, R. F.; Oktay, S.; Gontz, A. M.; Douglas, E. M.; Kim, J.; Sun, Q.; Strahler, A. H.; Li, Z.; van Aardt, J. A.; Kelbe, D.; Romanczyk, P.; Cawse-Nicholson, K.

    2013-12-01

    Airborne discrete and full waveform lidars have increasingly been utilized to augment multispectral and hyperspectral imaging of coastal ecosystems. While these data provide important landscape assessments of the shore and nearshore environment, they often lack the frequency that is really needed to monitor complex vegetative systems such as salt marshes and mangroves and provide rapid evaluations in the aftermath of severe storms. One solution is to augment the sparse airborne and satellite acquisitions with terrestrial laser scanning (TLS) information. However, most institutions with fine resolution discrete or full waveform TLS instruments are unwilling to risk these expensive (and often heavy) lidar in marine or estuarine environments. The Canopy Biomass Lidar (CBL) is an inexpensive, highly portable, fast-scanning, time-of-flight, TLS instrument, originally conceived by the Katholieke Universiteit Leuven (KUL) and refined by the Rochester Institute of Technology (RIT). Two new CBLs, constructed by the University of Massachusetts Boston (UMB), have been successfully deployed in deciduous and conifer forests at Long Term Ecological Research (LTER) and National Ecological Observatory Network (NEON) sites in Massachusetts (Harvard Forest) and California (Sierra National Forest), and in eucalypt forests at long-term and Terrestrial Ecosystem Research Network (TERN) sites in Queensland, Australia. Both the UMB and RIT CBLs have also been deployed in savanna systems at the San Joaquin Rangeland (and NEON site) in California. The UMB CBLs are now being deployed in salt marsh systems in Massachusetts with plans underway to deploy them in mangrove forests later in the year. In particular, they are being used to characterize the water facing edge of saltmarsh at UMB's Nantucket Island field station and remnant salt marshes on the highly urbanized Neponset estuary draining into Boston Harbor. While CBL's 905nm nearIR wavelength is of little use in nearshore inundated

  5. Portable Airborne Laser System Measures Forest-Canopy Height

    Science.gov (United States)

    Nelson, Ross

    2005-01-01

    (PALS) is a combination of laser ranging, video imaging, positioning, and data-processing subsystems designed for measuring the heights of forest canopies along linear transects from tens to thousands of kilometers long. Unlike prior laser ranging systems designed to serve the same purpose, the PALS is not restricted to use aboard a single aircraft of a specific type: the PALS fits into two large suitcases that can be carried to any convenient location, and the PALS can be installed in almost any local aircraft for hire, thereby making it possible to sample remote forests at relatively low cost. The initial cost and the cost of repairing the PALS are also lower because the PALS hardware consists mostly of commercial off-the-shelf (COTS) units that can easily be replaced in the field. The COTS units include a laser ranging transceiver, a charge-coupled-device camera that images the laser-illuminated targets, a differential Global Positioning System (dGPS) receiver capable of operation within the Wide Area Augmentation System, a video titler, a video cassette recorder (VCR), and a laptop computer equipped with two serial ports. The VCR and computer are powered by batteries; the other units are powered at 12 VDC from the 28-VDC aircraft power system via a low-pass filter and a voltage converter. The dGPS receiver feeds location and time data, at an update rate of 0.5 Hz, to the video titler and the computer. The laser ranging transceiver, operating at a sampling rate of 2 kHz, feeds its serial range and amplitude data stream to the computer. The analog video signal from the CCD camera is fed into the video titler wherein the signal is annotated with position and time information. The titler then forwards the annotated signal to the VCR for recording on 8-mm tapes. The dGPS and laser range and amplitude serial data streams are processed by software that displays the laser trace and the dGPS information as they are fed into the computer, subsamples the laser range and

  6. Canopy gap colonization in the Atlantic Montane Rain Forest

    Directory of Open Access Journals (Sweden)

    Renato A. Ferreira de Lima

    2006-11-01

    Full Text Available In the Atlantic Montane Rain Forest of South-eastern Brazil, a study was carried out to describe and evaluate canopy gap colonization. Gap composition by herb species was assessed through their soil coverage and woody species by measuring and identifying all individuals taller than one meter. Gap structure (gap size, number and diameter of treefalls, topographic position and surrounding vegetation were also measured. Two genera of Marantaceae were markedly frequent and abundant inside gaps. The more abundant and frequent woody species were shade tolerant. Species-rich families found inside gaps did not differ from the forest as a whole. Results revealed that direct and indirect influences of topography were important to determine gap composition of woody species. Evidently gap colonization had a considerable influence of topography and pre-established individuals besides variables of gap structure.Na Floresta Pluvial Atlântica Montana do Sudeste Brasileiro, foi realizado um estudo para descrever e avaliar a colonização de clareiras. A composição de clareiras foi levantada através da cobertura do solo para as espécies herbáceas enquanto que todos os indivíduos lenhosos maiores que um metro de altura foram mensurados e identificados. Também foram coletadas informações sobre a estrutura das clareiras (área da clareira, número e diâmetro das quedas, posição topográfica e vegetação circundante. Dois gêneros de Marantaceae apresentaram considerável freqüência e abundância nas clareiras. As espécies lenhosas mais freqüentes e abundantes pertenceram ao grupo não-pioneiro e as famílias mais ricas encontradas nas clareiras não diferiram quando comparado à floresta como um todo. Como para as variáveis do estrato herbáceo e da vegetação circundante, os resultados revelaram que efeitos diretos e indiretos da topografia são importantes na determinação da composição interna de clareiras por espécies lenhosas. Estes

  7. Airborne X-Hh Incidence Angle Impact on Canopy Height Retreival: Implications for Spaceborne X-Hh Tandem-X Global Canopy Height Model

    Science.gov (United States)

    Tighe, M. L.; King, D.; Balzter, H.; Bannari, A.; McNairn, H.

    2012-07-01

    To support international climate change mitigation efforts, the United Nations REDD+ initiative (Reducing Emissions from Deforestation and Degradation) seeks to reduce land use induced greenhouse gas emissions to the atmosphere. It requires independent monitoring of forest cover and forest biomass information in a spatially explicit form. It is widely recognised that remote sensing is required to deliver this information. Synthetic Aperture Radar interferometry (InSAR) techniques have gained traction in the last decade as a viable technology from which vegetation canopy height and bare earth elevations can be derived. The viewing geometry of a SAR sensor is side-looking where the radar pulse is transmitted out to one side of the aircraft or satellite, defining an incidence angle (θ) range. The incidence angle will change from near-range (NR) to far-range (FR) across of the track of the SAR platform. InSAR uses image pairs and thus, contain two set of incidence angles. Changes in the InSAR incidence angles can alter the relative contributions from the vegetation canopy and the ground surface and thus, affect the retrieved vegetation canopy height. Incidence angle change is less pronounced in spaceborne data than in airborne data and mitigated somewhat when multiple InSAR-data takes are combined. This study uses NEXTMap® single- and multi-pass X-band HH polarized InSAR to derive vegetation canopy height from the scattering phase centre height (hspc). Comparisons with in situ vegetation canopy height over three test sites (Arizona-1, Minnesota-2); the effect of incidence angle changes across swath on the X-HH InSAR hspc was examined. Results indicate at steep incidence angles (θ = 35º), more exposure of lower vegetation canopy structure (e.g. tree trunks) led to greater lower canopy double bounce, increased ground scattering, and decreased volume scattering. This resulted in a lower scattering phase centre height (hspc) or a greater underestimation of vegetation

  8. Fractal Characteristics of Population Canopy Structure of the Mangrove, Bruguiera gymnorrhiza (L.) Lamk

    Institute of Scientific and Technical Information of China (English)

    Liang Shichu; Wang Bosun

    2003-01-01

    The fractal characteristics of the canopy structure of B. gvmnorrhiza population are investigated by fractal dimension analysis in the National Shankou Mangrove Nature Reserve. The 3-year-old branches have box dimensions between 1.22 and 1.55, showing the complexity degree of branching structure and the ability of occupying and utilizing ecological space. It may be considered that fractal dimension provides a useful index for the study of light utilization efficiencies and growth processes of B. gymnorrhiza. Calculated by using the two-surface method, the fractal dimensions for the crown pattern of individuals with ages of 20 to 50 years range from 2.21 to 2.54, indicating that the filling degree of foliage to a tree crown is relatively low and B. gymnorrhiza has the property of a sun plant.Along with the increase of ages of individuals, the filling degree of foliage to a tree crown changes from high to low, and so does the fractal dimension. The box dimensions obtained from the grayscale curves of population canopy are between 1.47 and 1.61. The greater the box dimension, the more loosely organized the canopy spatial structure, and the more the light spots. The canopy structural information and complexity of a population can be effectively captured by box dimensions obtained from canopy grayscale curves.

  9. Selection of forest canopy gaps by male Cerulean Warblers in West Virginia

    Science.gov (United States)

    Perkins, Kelly A.; Wood, Petra Bohall

    2014-01-01

    Forest openings, or canopy gaps, are an important resource for many forest songbirds, such as Cerulean Warblers (Setophaga cerulea). We examined canopy gap selection by this declining species to determine if male Cerulean Warblers selected particular sizes, vegetative heights, or types of gaps. We tested whether these parameters differed among territories, territory core areas, and randomly-placed sample plots. We used enhanced territory mapping techniques (burst sampling) to define habitat use within the territory. Canopy gap densities were higher within core areas of territories than within territories or random plots, indicating that Cerulean Warblers selected habitat within their territories with the highest gap densities. Selection of regenerating gaps with woody vegetation >12 m within the gap, and canopy heights >24 m surrounding the gap, occurred within territory core areas. These findings differed between two sites indicating that gap selection may vary based on forest structure. Differences were also found regarding the placement of territories with respect to gaps. Larger gaps, such as wildlife food plots, were located on the periphery of territories more often than other types and sizes of gaps, while smaller gaps, such as treefalls, were located within territory boundaries more often than expected. The creations of smaller canopy gaps, <100 m2, within dense stands are likely compatible with forest management for this species.

  10. Canopy arthropods community within and among oak species in central Mexico

    Institute of Scientific and Technical Information of China (English)

    Efraín TOVAR-SANCHEZ

    2009-01-01

    Quercus rugosa and Q.laurina are species that presents a wide geographical distribution range in temperate forests of Mexico. Oak canopies contain a considerable portion of arthropod diversity and the arthropods fauna fulfill a wide variety of ecological roles. We examined the effect of oak species and seasonal changes on some community structure parameters (diversity, composition, similarity, biomass, rare species, and density of arthropod fauna) of canopy arthropods. In total, 40 oak canopies were fogged during rainy and dry season. A total of 614 identified arthropod morphospecies were recognized belonging to 22 orders associated with tree canopies. A separation of host tree species during both seasons, suggesting a different community structure on host plants species was demonstrated by the principal component analyses (PCA), therefore, differences between oak species results in phenotypes that structure the composition of the arthropod community. Q.laurina registered the highest densities, diversity index and number of rare species in comparison with Q.rugosa. While arthropod biomass showed an inverse pattern. Trees more close to one another (spatial distance) register a more similar canopy arthropod fauna. This study suggests that the trees of Q.laurina could act as a center of biodiversity by the accumulation of arthropod fauna with a considerable number of rare species, which presents wide ecological roles or is involved in critical processes that maintain forest ecosystems[Current Zoology 55(2):132-144,2009].

  11. Developing a regional canopy fuels assessment strategy using multi-scale lidar

    Science.gov (United States)

    Peterson, Birgit E.; Nelson, Kurtis

    2011-01-01

    Accurate assessments of canopy fuels are needed by fire scientists to understand fire behavior and to predict future fire occurrence. A key descriptor for canopy fuels is canopy bulk density (CBD). CBD is closely linked to the structure of the canopy; therefore, lidar measurements are particularly well suited to assessments of CBD. LANDFIRE scientists are exploring methods to integrate airborne and spaceborne lidar datasets into a national mapping effort. In this study, airborne lidar, spaceborne lidar, and field data are used to map CBD in the Yukon Flats Ecoregion, with the airborne lidar serving as a bridge between the field data and the spaceborne observations. The field-based CBD was positively correlated with airborne lidar observations (R2=0.78). Mapped values of CBD using the airborne lidar dataset were significantly correlated with spaceborne lidar observations when analyzed by forest type (R2=0.62, evergreen and R2=0.71, mixed). Though continued research is necessary to validate these results, they do support the feasibility of airborne and, most importantly, spaceborne lidar data for canopy fuels assessment.

  12. Modeling the Impact of Vegetation Structure on Canopy Radiative Transfer for a Global Vegetation Dynamic Model

    Science.gov (United States)

    Ni-Meister, W.; Kiang, N.; Yang, W.

    2007-12-01

    The transmission of light through plant canopies results in vertical profiles of light intensity that affect the photosynthetic activity and gas exchange of plants, their competition for light, and the canopy energy balance. The accurate representation of the canopy light profile is then important for predicting ecological dynamics. The study presents a simple canopy radiative transfer scheme to characterize the impact of the horizontal and vertical vegetation structure heterogeneity on light profiles. Actual vertical foliage profile and a clumping factor which are functions of tree geometry, size and density and foliage density are used to characterize the vertical and horizontal vegetation structure heterogeneity. The simple scheme is evaluated using the ground and airborne lidar data collected in deciduous and coniferous forests and was also compared with the more complex Geometric Optical and Radiative Transfer (GORT) model and the two-stream scheme currently being used to describe light interactions with vegetation canopy in most GCMs. The simple modeled PAR profiles match well with the ground data, lidar and full GORT model prediction, it performs much better than the simple Beer's&plaw used in two stream scheme. This scheme will have the same computation cost as the current scheme being used in GCMs, but provides better photosynthesis, radiative fluxes and surface albedo estimates, thus is suitable for a global vegetation dynamic model embedded in GCMs.

  13. Effects of Plant Density on Yield and Canopy Micro Environment in Hybrid Cotton

    Institute of Scientific and Technical Information of China (English)

    YANG Guo-zheng; LUO Xue-jiao; NIE Yi-chun; ZHANG Xian-long

    2014-01-01

    A rational plant population is an important attribute to high yield of cotton, because it can provide a beneifcial micro environment within the canopy for plant growth and development as well as yield formation. A 2-yr ifeld experiment was conducted to determine the optimal plant density based on cotton yield in relation to the canopy micro environment (canopy temperature, relative humidity and light transmittance). Six plant densities (1.2-5.7 plants m-2) were arranged with a completely randomized block design. The highest cotton yield (1 507 kg ha-1) was obtained at 3.0 plants m-2 due to more bolls per unit ground area (79 bolls m-2), while the lowest yield (1 091 kg ha-1) was obtained at 1.2 plants m-2. Under the moderate plant density (3.0 plants m-2), there was a lower mean daily temperature (MDT, 27.1°C) attributing to medium daily minimum temperature (Tmin, 21.9°C) and the lowest daily maximum temperature (Tmax, 35.8°C), a moderate mean canopy light transmittance of 0.51, and lower mean daily relative humidity (MRH) of 79.7%from June to October. The results suggest that 3.0 plants m-2 would be the optimal plant density because it provides a better canopy micro environment.

  14. Wave propagation in a solar quiet region and the influence of the magnetic canopy

    CERN Document Server

    Kontogiannis, Ioannis; Tziotziou, Kostas

    2015-01-01

    Aims. We seek indications or evidence of transmission/conversion of magnetoacoustic waves at the magnetic canopy, as a result of its impact on the properties of the wave field of the photosphere and chromosphere. Methods. We use cross-wavelet analysis to measure phase differences between intensity and Doppler signal oscillations in the Halpha, CaII H, and G-band.We use the height of the magnetic canopy to create appropriate masks to separate internetwork (IN) and magnetic canopy regions. We study wave propagation and differences between these two regions. Results. The magnetic canopy affects wave propagation by lowering the phase differences of progressive waves and allowing the propagation of waves with frequencies lower than the acoustic cut-off. We also find indications in the Doppler signals of Halpha of a response to the acoustic waves at the IN, observed in the CaII H line. This response is affected by the presence of the magnetic canopy. Conclusions. Phase difference analysis indicates the existence of...

  15. A Comparison of Mangrove Canopy Height Using Multiple Independent Measurements from Land, Air, and Space

    Directory of Open Access Journals (Sweden)

    David Lagomasino

    2016-04-01

    Full Text Available Canopy height is one of the strongest predictors of biomass and carbon in forested ecosystems. Additionally, mangrove ecosystems represent one of the most concentrated carbon reservoirs that are rapidly degrading as a result of deforestation, development, and hydrologic manipulation. Therefore, the accuracy of Canopy Height Models (CHM over mangrove forest can provide crucial information for monitoring and verification protocols. We compared four CHMs derived from independent remotely sensed imagery and identified potential errors and bias between measurement types. CHMs were derived from three spaceborne datasets; Very-High Resolution (VHR stereophotogrammetry, TerraSAR-X add-on for Digital Elevation Measurement, and Shuttle Radar Topography Mission (TanDEM-X, and lidar data which was acquired from an airborne platform. Each dataset exhibited different error characteristics that were related to spatial resolution, sensitivities of the sensors, and reference frames. Canopies over 10 m were accurately predicted by all CHMs while the distributions of canopy height were best predicted by the VHR CHM. Depending on the guidelines and strategies needed for monitoring and verification activities, coarse resolution CHMs could be used to track canopy height at regional and global scales with finer resolution imagery used to validate and monitor critical areas undergoing rapid changes.

  16. Response of canopy stomatal conductance of Acacia mangium forest to environmental driving factors

    Institute of Scientific and Technical Information of China (English)

    Xiaojing LIU; Ping ZHAO; Xingquan RAO; Ling MA; Xian CAI; Xiaoping ZENG

    2008-01-01

    Granier's probes were applied to measure the sap flow of 14 sample trees in an Acacia mangium forest on the hilly lands in Heshan City, Guangdong, during the time period of October, 2003. The photosynthetically active radi-ation (PAR), air relative humidity (RH) and temperature of air (T) above the forest canopy were recorded. The sap flow measurement was used in combination with morphological characteristics of tree and forest structure to calculate the whole-tree transpiration (E), stand transpiration (Et), and mean canopy stomatal conductance (gc). Analyses on the rela-tionships between tree morphological characters and whole-tree water use, and on the responses of gc to PAR and vapor pressure deficit (D) were conducted. The results showed that whole-tree transpiration correlated significantly and positively with tree diameter at breast height (DBH) (p < 0.0001), with sapwood area (p < 0.0001), and with canopy size (p = 0.0007) logarithmically, but exponentially with tree height (p = 0.014). The analyses on the responses of canopy stomatal conductance showed that the maximum gc (gcmax) changed with PAR in a hyperbolic curve (p <0.0001) and with D in a logarithmic one (p < 0.0001). The results obtained with sap flow technique indicate its reliability and accuracy of the methods of estimation of whole-tree and stand transpirations and canopy stomatal conductance.

  17. Photosynthesis and stomatal conductance related to reflectance on the canopy scale

    Science.gov (United States)

    Verma, S. B.; Sellers, P. J.; Walthall, C. L.; Hall, F. G.; Kim, J.; Goetz, S. J.

    1993-01-01

    Field measurements of carbon dioxide and water vapor fluxes were analyzed in conjunction with reflectances obtained from a helicopter-mounted Modular Multiband Radiometer at a grassland study site during the First International Satellite Land Surface Climatology Project Field Experiment. These measurements are representative of the canopy scale and were made over a range of meteorological and soil moisture conditions during different stages in the annual life cycle of the prairie vegetation, and thus provide a good basis for investigating hpotheses/relationships potentially useful in remote sensing applications. We tested the hypothesis (Sellers, 1987) that the simple ratio vegetation index should be near-linearly related to the derivatives of the unstressed canopy stomatal conductance and the unstressed canopy photosynthesis with respect to photosynthetically active radiation. Even though there is some scatter in our data, the results seem to support this hypothesis.

  18. High-dose therapy improved the bone remodelling compartment canopy and bone formation in multiple myeloma

    DEFF Research Database (Denmark)

    Hinge, Maja; Delaissé, Jean-Marie; Plesner, Torben;

    2015-01-01

    . Loss of this canopy has been associated with bone loss. This study addresses whether the bone remodelling in MM is improved by high-dose therapy. Bone marrow biopsies obtained from 20 MM patients, before and after first-line treatment with high-dose melphalan followed by autologous stem cell...... transplantation, and from 20 control patients with monoclonal gammopathy of undetermined significance were histomorphometrically investigated. This investigation confirmed that MM patients exhibited uncoupled bone formation to resorption and reduced canopy coverage. More importantly, this study revealed......Bone loss in multiple myeloma (MM) is caused by an uncoupling of bone formation to resorption trigged by malignant plasma cells. Increasing evidence indicates that the bone remodelling compartment (BRC) canopy, which normally covers the remodelling sites, is important for coupled bone remodelling...

  19. Assessing the vegetation canopy influences on wind flow using wind tunnel experiments with artificial plants

    Science.gov (United States)

    Hong, Youngjoo; Kim, Dongyeob; Im, Sangjun

    2016-04-01

    Wind erosion causes serious problems and considerable threat in most regions of the world. Vegetation on the ground has an important role in controlling wind erosion by covering soil surface and absorbing wind momentum. A set of wind tunnel experiments was performed to quantitatively examine the effect of canopy structure on wind movement. Artificial plastic vegetations with different porosity and canopy shape were introduced as the model canopy. Normalized roughness length ( Z 0/ H) and shear velocity ratio ( R) were analyzed as a function of roughness density ( λ). Experiments showed that Z 0/ H increases and R decreases as λ reaches a maximum value, λ max, while the values of Z 0/ H and R showed little change with λ value beyond as λ max.

  20. Estimation of dry deposition fluxes of major inorganic species by canopy throughfall approach

    Institute of Scientific and Technical Information of China (English)

    JIN Lei; SHAO Min; ZENG Limin; ZHAO Dawei; TANG Dagang

    2006-01-01

    Dry deposition in China has not yet been intensively studied even though it constitutes an important pathway for acid deposition. The total deposition was monitored at Tieshanping catchment, a regional remote site in Chongqing City. The dry deposition loads of sulphur, calcium and nitrogen are estimated by using a canopy throughfall approach. The results indicate that the annual dry deposition loads of sulphur and calcium at Tieshanping site are much higher than those measured in forestry areas in other countries, while the dry deposition flux of nitrogen is at a comparable level. The dry deposition loads of sulphur, calcium and nitrogen are all higher than the wet deposition loads. Applying a canopy budget model has proven that the routine, simplified canopy throughfall approach may underestimate the dry deposition flux of nitrogen-containing species.

  1. The gap probability model for canopy thermal infrared emission with non-scattering approximation

    Institute of Scientific and Technical Information of China (English)

    牛铮; 柳钦火; 高彦春; 张庆员; 王长耀

    2000-01-01

    To describe canopy emitting thermal radiance precisely and physically is one of the key researches in retrieving land surface temperature (LSI) over vegetation-covered regions by remote sensing technology. This work is aimed at establishing gap probability models to describe the thermal emission characteristics in continuous plant, including the basic model and the sunlit model. They are suitable respectively in the nighttime and in the daytime. The sunlit model is the basic model plus a sunlit correcting item which takes the hot spot effect into account. The researches on the directional distribution of radiance and its relationship to canopy structural parameters, such as the leaf area index (LAI) and leaf angle distribution (LAD), were focused. The characteristics of directional radiance caused by temperature differences among components in canopy, such as those between leaf and soil, and between sunlit leaf or soil and shadowed leaf or soil, were analyzed. A well fitting between experimental data an

  2. Monitoring Protein and Starch Accumulation in Wheat Grains with Leaf SPAD and Canopy Spectral Reflectance

    Institute of Scientific and Technical Information of China (English)

    TIAN Yong-chao; ZHU yan; CAO Wei-xing; FAN Xue-mei; LIU Xiao-jun

    2003-01-01

    The research was conducted to determine the relationships of protein and starch accumulation dynamics in grains of wheat to post-heading leaf SPAD values and canopy spectral reflectance. The results showed that leaf nitrogen accumulation was exponentially related to leaf SPAD values and linearly related to canopy spectral reflectance, and that there was negative linear relationship between leaf nitrogen accumulation and grain protein accumulation, but positive linear relationship between post-heading leaf nitrogen translocation and grain protein accumulation at maturity. In addition, leaf SPAD values were parabolically related with and ratio indices R(1 500,610) and R(1 220,560) were exponentially related with protein and starch accumulation in grains. These results indicate that leaf SPAD values and canopy spectral reflectance should be good indicators of quality formation dynamics in wheat grains.

  3. Progressive forest canopy water loss during the 2012-2015 California drought.

    Science.gov (United States)

    Asner, Gregory P; Brodrick, Philip G; Anderson, Christopher B; Vaughn, Nicholas; Knapp, David E; Martin, Roberta E

    2016-01-12

    The 2012-2015 drought has left California with severely reduced snowpack, soil moisture, ground water, and reservoir stocks, but the impact of this estimated millennial-scale event on forest health is unknown. We used airborne laser-guided spectroscopy and satellite-based models to assess losses in canopy water content of California's forests between 2011 and 2015. Approximately 10.6 million ha of forest containing up to 888 million large trees experienced measurable loss in canopy water content during this drought period. Severe canopy water losses of greater than 30% occurred over 1 million ha, affecting up to 58 million large trees. Our measurements exclude forests affected by fire between 2011 and 2015. If drought conditions continue or reoccur, even with temporary reprieves such as El Niño, we predict substantial future forest change. PMID:26712020

  4. Airborne remote sensing of canopy water thickness scaled from leaf spectrometer data

    Science.gov (United States)

    Hunt, E. Raymond, Jr.

    1991-01-01

    The reflectance ratio of the middle-infrared band (MIR) to the near-infrared band (NIR) is linearly related to the log(10) equivalent water thickness (EWT) for single leaves of different morphologies, whereas the MIR/NIR radiance ratio is correlated with the leaf area index (LAI). The hypothesis that the MIR/NIR ratio measures canopy EWT was tested by reanalyzing airborne Thematic Mapper Simulator and field data obtained across a large gradient of LAI in western Oregon, U.S.A. The measured airborne MIR/NIR reflectance ratios for canopies were not significantly different from the predicted ratios using leaf data for canopy EWT, except for two desert woodland sites. The interpretation of the MIR/NIR ratio is scale-dependent, because leaf EWT is determined primarily by variations in LAI.

  5. Seasonal variability of interception evaporation from the canopy of a mixed deciduous forest

    DEFF Research Database (Denmark)

    Herbst, Mathias; Rosier, Paul T.W.; McNeil, David D.;

    2008-01-01

    Gross rainfall, net rainfall and stemflow were measured in a mixed deciduous woodland in southern England over a period of 14 months. Continuous measurements of standard weather data and momentum and sensible heat fluxes between the forest canopy and the atmosphere accompanied the investigation....... The gross rainfall was corrected for catch losses due to high turbulence. Reliable net rainfall data were obtained from a combined application of simple storage gauges and troughs connected to automatic tipping bucket gauges. The evaporation rates from the wet canopy were calculated with the Penman......% in the leafless period. The analytical sparse canopy rainfall interception model of Gash et al. [Gash, J.H.C., Lloyd, C.R., Lachaud, G., 1995. Estimating sparse forest rainfall interception with an analytical model. J. Hydrol. 170, 79-86] was parameterised, for the first time, for a mixed deciduous woodland...

  6. Improving photosynthetic efficiency to address food security in the 21st century: Strategies for a more efficient crop canopy

    Science.gov (United States)

    VanLoocke, A. D.; Slattery, R.; Bernacchi, C.; Zhu, X.; Ort, D. R.

    2013-12-01

    Global food production will need to increase by approximately 70% by mid-century to meet the caloric and nutritional demand of population and economic growth. Achieving this goal will require successfully implementing a wide range of strategies, spanning the social and physical sciences. Here we will present opportunities for improving crop production through increasing photosynthetic rates for a crop canopy that do not require additional agronomic inputs. We will focus on a specific strategy related optimizing the distribution of light within a crop canopy because it is a possible way to improve canopy photosynthesis in crops that form dense canopies, such as soybean, by increasing the transmission of light within a canopy via reduced chlorophyll content. We hypothesized that if decreasing chlorophyll content in soybean leaves will result in greater light penetration into the canopy then this will enhance canopy photosynthesis and improve yields. In addition, if current chlorophyll content in soybean results in excess light absorption, then decreasing chlorophyll content will result in decreased photoprotection that results in the suppression of upper canopy photosynthesis associated with super-optimal light. These hypotheses were tested in 2012 and 2013 in the field on the soybean cultivar 'Clark' (WT) and a nearly isogenic chlorophyll-b deficient mutant (Y11y11). Throughout the season, profiles of light sensors measured incident and reflected light intensity at the canopy surface as well as light levels at ten heights within the canopy. Analyses of these data indicated greater reflectivity, transmissivity and within-canopy light levels for the Y11y11 canopy relative to WT especially in the top half of the canopy. A Gas exchange method was used to determine photosynthetic capacity and suppression high light levels. Daily integrals of leaf-level photosynthesis in sun leaves were greater in Y11y11 compared to WT at several times during the growing season and

  7. Turbulent Transfer Coefficients and Calculation of Air Temperature inside Tall Grass Canopies in Land Atmosphere Schemes for Environmental Modeling.

    Science.gov (United States)

    Mihailovic, D. T.; Alapaty, K.; Lalic, B.; Arsenic, I.; Rajkovic, B.; Malinovic, S.

    2004-10-01

    A method for estimating profiles of turbulent transfer coefficients inside a vegetation canopy and their use in calculating the air temperature inside tall grass canopies in land surface schemes for environmental modeling is presented. The proposed method, based on K theory, is assessed using data measured in a maize canopy. The air temperature inside the canopy is determined diagnostically by a method based on detailed consideration of 1) calculations of turbulent fluxes, 2) the shape of the wind and turbulent transfer coefficient profiles, and 3) calculation of the aerodynamic resistances inside tall grass canopies. An expression for calculating the turbulent transfer coefficient inside sparse tall grass canopies is also suggested, including modification of the corresponding equation for the wind profile inside the canopy. The proposed calculations of K-theory parameters are tested using the Land Air Parameterization Scheme (LAPS). Model outputs of air temperature inside the canopy for 8 17 July 2002 are compared with micrometeorological measurements inside a sunflower field at the Rimski Sancevi experimental site (Serbia). To demonstrate how changes in the specification of canopy density affect the simulation of air temperature inside tall grass canopies and, thus, alter the growth of PBL height, numerical experiments are performed with LAPS coupled with a one-dimensional PBL model over a sunflower field. To examine how the turbulent transfer coefficient inside tall grass canopies over a large domain represents the influence of the underlying surface on the air layer above, sensitivity tests are performed using a coupled system consisting of the NCEP Nonhydrostatic Mesoscale Model and LAPS.

  8. A state-space modeling approach to estimating canopy conductance and associated uncertainties from sap flux density data.

    Science.gov (United States)

    Bell, David M; Ward, Eric J; Oishi, A Christopher; Oren, Ram; Flikkema, Paul G; Clark, James S

    2015-07-01

    Uncertainties in ecophysiological responses to environment, such as the impact of atmospheric and soil moisture conditions on plant water regulation, limit our ability to estimate key inputs for ecosystem models. Advanced statistical frameworks provide coherent methodologies for relating observed data, such as stem sap flux density, to unobserved processes, such as canopy conductance and transpiration. To address this need, we developed a hierarchical Bayesian State-Space Canopy Conductance (StaCC) model linking canopy conductance and transpiration to tree sap flux density from a 4-year experiment in the North Carolina Piedmont, USA. Our model builds on existing ecophysiological knowledge, but explicitly incorporates uncertainty in canopy conductance, internal tree hydraulics and observation error to improve estimation of canopy conductance responses to atmospheric drought (i.e., vapor pressure deficit), soil drought (i.e., soil moisture) and above canopy light. Our statistical framework not only predicted sap flux observations well, but it also allowed us to simultaneously gap-fill missing data as we made inference on canopy processes, marking a substantial advance over traditional methods. The predicted and observed sap flux data were highly correlated (mean sensor-level Pearson correlation coefficient = 0.88). Variations in canopy conductance and transpiration associated with environmental variation across days to years were many times greater than the variation associated with model uncertainties. Because some variables, such as vapor pressure deficit and soil moisture, were correlated at the scale of days to weeks, canopy conductance responses to individual environmental variables were difficult to interpret in isolation. Still, our results highlight the importance of accounting for uncertainty in models of ecophysiological and ecosystem function where the process of interest, canopy conductance in this case, is not observed directly. The StaCC modeling

  9. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain.

    Science.gov (United States)

    Bischof, Kai; Peralta, Gloria; Kräbs, Gudrun; Van De Poll, Willem H; Pérez-Lloréns, José Lucas; Breeman, Anneke M

    2002-12-01

    Within the sheltered creeks of Cádiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA damage in Ulva aff. rotundata Bliding from southern Spain was assessed in the field. Samples collected from the natural community were covered by screening filters, generating different radiation conditions. During daily cycles, individual thalli showed photoinhibitory effects of the natural solar radiation. This inhibition was even more pronounced in samples only exposed to photosynthetically active radiation (PAR). Strongly increased heat dissipation in these samples indicated the activity of regulatory mechanisms involved in dynamic photoinhibition. Adverse effects of UV-B radiation on photosynthesis were only observed in combination with high levels of PAR, indicating the synergistic effects of the two wavelength ranges. In samples exposed either to PAR+UV-A or to UV-B+UV-A without PAR, no inhibition of photosynthetic quantum yield was found in the course of the day. At the natural site, the top layer of the mat-like canopies is generally completely bleached. Artificially designed Ulva canopies exhibited fast bleaching of the top layer under the natural solar radiation conditions, while this was not observed in canopies either shielded from UV or from PAR. The bleached first layer of the canopies acts as a selective UV-B filter, and thus prevents subcanopy thalli from exposure to harmful radiation. This was confirmed by the differences in photosynthetic activity, pigment composition, and the concentration of RubisCO in thalli with different positions within the canopy. In addition, the induction of the stress protein CPN 60 under UV exposure and the low accumulation of DNA damage indicate the presence of physiological protection mechanisms against harmful UV-B. A

  10. Impact of Canopy Cover on Butterfly Abundance and Diversity in Intermediate Zone Forest of Sri Lanka

    Directory of Open Access Journals (Sweden)

    B.M.B Weerakoon

    2015-09-01

    Full Text Available This study was designed to identify the influence of canopy cover on butterfly abundance in young secondary forest and regenerating forest at Maragamuwa area of Kumaragala forest reserve in Naula, Matale district of Sri Lanka. Line transect method was used to collect data. Hundred meter long five transects were established in each forest area. Butterfly abundance data were collected weekly for eight months from January to August 2014. Regenerating forest had low canopy cover (<50% than young secondary forest (20-90%. Total of 2,696 butterflies belonging to 87 species in six families were recorded. Some butterfly species were restricted to shady areas, but most butterflies were abundant in sunny areas. Butterflies in some families (Family Lycanidae, Nymphalidae, Pieridae were abundant in sunny conditions and some families (Family Hesperiidae, Papilionidae abundant in shade. ANOVA was conducted to identify the variation of number of species (F=54.05, p<0.001 and among abundance (F=10.49, p<0.05 with the canopy cover. Species richness was high in moderate canopy cover (20±5%. Negative Pearson correlation coefficient stated butterfly abundance decreased with the canopy cover (r=-0.91 and species richness decreased with canopy cover (r=-0.85.Some butterflies were common in sunny areas and some species were confined to shady areas. However, most of the species were generally found throughout the area. Regenerating forest encountered more shrubs than in young secondary forest, which butterflies preferred to food on. Main findings of the study were that butterfly abundance was high in sunny areas and butterfly species richness was high in moderate shady areas.

  11. Reconstruction of forest geometries from terrestrial laser scanning point clouds for canopy radiative transfer modelling

    Science.gov (United States)

    Bremer, Magnus; Schmidtner, Korbinian; Rutzinger, Martin

    2015-04-01

    The architecture of forest canopies is a key parameter for forest ecological issues helping to model the variability of wood biomass and foliage in space and time. In order to understand the nature of subpixel effects of optical space-borne sensors with coarse spatial resolution, hypothetical 3D canopy models are widely used for the simulation of radiative transfer in forests. Thereby, radiation is traced through the atmosphere and canopy geometries until it reaches the optical sensor. For a realistic simulation scene we decompose terrestrial laser scanning point cloud data of leaf-off larch forest plots in the Austrian Alps and reconstruct detailed model ready input data for radiative transfer simulations. The point clouds are pre-classified into primitive classes using Principle Component Analysis (PCA) using scale adapted radius neighbourhoods. Elongated point structures are extracted as tree trunks. The tree trunks are used as seeds for a Dijkstra-growing procedure, in order to obtain single tree segmentation in the interlinked canopies. For the optimized reconstruction of branching architectures as vector models, point cloud skeletonisation is used in combination with an iterative Dijkstra-growing and by applying distance constraints. This allows conducting a hierarchical reconstruction preferring the tree trunk and higher order branches and avoiding over-skeletonization effects. Based on the reconstructed branching architectures, larch needles are modelled based on the hierarchical level of branches and the geometrical openness of the canopy. For radiative transfer simulations, branch architectures are used as mesh geometries representing branches as cylindrical pipes. Needles are either used as meshes or as voxel-turbids. The presented workflow allows an automatic classification and single tree segmentation in interlinked canopies. The iterative Dijkstra-growing using distance constraints generated realistic reconstruction results. As the mesh representation

  12. A modified micrometeorological gradient method for estimating O3 dry deposition over a forest canopy

    Directory of Open Access Journals (Sweden)

    Z. Y. Wu

    2015-01-01

    Full Text Available Small pollutant concentration gradients between levels above a plant canopy result in large uncertainties in estimated air–surface exchange fluxes when using existing micrometeorological gradient methods, including the aerodynamic gradient method (AGM and the modified Bowen-Ratio method (MBR. A modified micrometeorological gradient method (MGM is proposed in this study for estimating O3 dry deposition fluxes over a forest canopy using concentration gradients between a level above and a level below the canopy top, taking advantage of relatively large gradients between these levels due to significant pollutant uptake at top layers of the canopy. The new method is compared with the AGM and MBR methods and is also evaluated using eddy-covariance (EC flux measurements collected at the Harvard Forest Environmental Measurement Site, Massachusetts during 1993–2000. All the three gradient methods (AGM, MBR and MGM produced similar diurnal cycles of O3 dry deposition velocity (Vd(O3 to the EC measurements, with the MGM method being the closest in magnitude to the EC measurements. The multi-year average Vd(O3 differed significantly between these methods, with the AGM, MBR and MGM method being 2.28, 1.45 and 1.18 times of that of the EC. Sensitivity experiments identified several input parameters for the MGM method as first-order parameters that affect the estimated Vd(O3. A 10% uncertainty in the wind speed attenuation coefficient or canopy displacement height can cause about 10% uncertainty in the estimated Vd(O3. An unrealistic leaf area density vertical profile can cause an uncertainty of a factor of 2.0 in the estimated Vd(O3. Other input parameters or formulas for stability functions only caused an uncertainly of a few percent. The new method provides an alternative approach in monitoring/estimating long-term deposition fluxes of similar pollutants over tall canopies.

  13. Canopy and leaf composition drive patterns of nutrient release from pruning residues in a coffee agroforest.

    Science.gov (United States)

    Tully, Katherine L; Lawrence, Deborah

    2012-06-01

    In a coffee agroforest, the crop is cultivated under the shade of fruit-bearing and nitrogen (N)-fixing trees. These trees are periodically pruned to promote flowering and fruiting as well as to make nutrients stored in tree biomass available to plants. We investigated the effect of canopy composition and substrate quality on decomposition rates and patterns of nutrient release from pruning residues in a coffee agroforest located in Costa Rica's Central Valley. Initial phosphorus (P) release was enhanced under a canopy composed solely of N-fixing, Erythrina poeppigiana compared to a mixed canopy of Erythrina and Musa acuminata (banana). Both initial and final N release were similar under the two canopy types. However, after five months of decomposition, a higher proportion of initial N had been released under the single canopy. Although patterns of decomposition and nutrient release were not predicted by initial substrate quality, mass loss in leaf mixtures rates were well predicted by mean mass loss of their component species. This study identifies specific pruning regimes that may regulate N and P release during crucial growth periods, and it suggests that strategic pruning can enhance nutrient availability. For example, during the onset of rapid fruit growth, a two-species mixture may release more P than a three-species mixture. However, by the time of the harvest, the two- and three-species mixtures have released roughly the same amount of N and P. These nutrients do not always follow the same pattern, as N release can be maximized in single-species substrates, while P release is often facilitated in species mixtures. Our study indicates the importance of management practices in mediating patterns of nutrient release. Future research should investigate how canopy composition and farm management can also mediate on-farm nutrient losses.

  14. Correlations between canopy gaps and species diversity in broad-leaved and Korean pine mixed forests

    Institute of Scientific and Technical Information of China (English)

    ZHAO Xiuhai; ZHANG Chunyu; ZHENG Jingming

    2006-01-01

    Regeneration of tree species associated with canopy gaps in broad-leaved Korean pine forests was investigated.Species diversity in gaps and under closed canopy was compared,the relationship between biodiversity and gap structure was analyzed.Results indicate that there were significant differences between tree species diversity in gaps and that under canopy (p<0.01).In terms of Shannon-Wiener index,evenness index,and abundance index,the biodiversity in gap community were higher than those under forest canopy in regeneration layer.In terms of Simpson's dominance index,the dominance of certain species in the regeneration layer increased from gaps to closed canopy (p<0.01).In contrast,trends of biodiversity changes of succession layer in gaps and under closed canopy were opposite.Tree species diversity of different layers reacted directly to the change of gap size class.For example,Shannon-Wiener index and abundance index is higher and Simpson's dominance index is the lowest in succession layer of medium-size gap (100-250 m2) in the broad-leaved Korean pine forest of Changbai Mountains.Shannon-Wiener index reached the highest in a size of≥250 m2 and<100 m2,reached the lowest in a size of 200-250 m2 in the regeneration layer.Simpson's dominance index reached its maximum when the gap size was between 200 and 250m2.Generally,species of different layers reacted differently to the changes of gap size classes.The gap size class with more seedlings did not correspond to size class containing more medium-size trees.Tree species diversity indices in the two layers behaved reciprocally during the development process of forest gaps.

  15. Canopy and leaf composition drive patterns of nutrient release from pruning residues in a coffee agroforest.

    Science.gov (United States)

    Tully, Katherine L; Lawrence, Deborah

    2012-06-01

    In a coffee agroforest, the crop is cultivated under the shade of fruit-bearing and nitrogen (N)-fixing trees. These trees are periodically pruned to promote flowering and fruiting as well as to make nutrients stored in tree biomass available to plants. We investigated the effect of canopy composition and substrate quality on decomposition rates and patterns of nutrient release from pruning residues in a coffee agroforest located in Costa Rica's Central Valley. Initial phosphorus (P) release was enhanced under a canopy composed solely of N-fixing, Erythrina poeppigiana compared to a mixed canopy of Erythrina and Musa acuminata (banana). Both initial and final N release were similar under the two canopy types. However, after five months of decomposition, a higher proportion of initial N had been released under the single canopy. Although patterns of decomposition and nutrient release were not predicted by initial substrate quality, mass loss in leaf mixtures rates were well predicted by mean mass loss of their component species. This study identifies specific pruning regimes that may regulate N and P release during crucial growth periods, and it suggests that strategic pruning can enhance nutrient availability. For example, during the onset of rapid fruit growth, a two-species mixture may release more P than a three-species mixture. However, by the time of the harvest, the two- and three-species mixtures have released roughly the same amount of N and P. These nutrients do not always follow the same pattern, as N release can be maximized in single-species substrates, while P release is often facilitated in species mixtures. Our study indicates the importance of management practices in mediating patterns of nutrient release. Future research should investigate how canopy composition and farm management can also mediate on-farm nutrient losses. PMID:22827139

  16. Large eddy simulations as a parameterization tool for canopy-structure X VOC-flux interactions

    Science.gov (United States)

    Kenny, William; Bohrer, Gil; Chatziefstratiou, Efthalia

    2015-04-01

    We have been working to develop a new post-processing model - High resolution VOC Atmospheric Chemistry in Canopies (Hi-VACC) - which resolves the dispersion and chemistry of reacting chemical species given their emission rates from the vegetation and soil, driven by high resolution meteorological forcing and wind fields from various high resolution atmospheric regional and large-eddy simulations. Hi-VACC reads in fields of pressure, temperature, humidity, air density, short-wave radiation, wind (3-D u, v and w components) and sub-grid-scale turbulence that were simulated by a high resolution atmospheric model. This meteorological forcing data is provided as snapshots of 3-D fields. We have tested it using a number of RAMS-based Forest Large Eddy Simulation (RAFLES) runs. This can then be used for parameterization of the effects of canopy structure on VOC fluxes. RAFLES represents both drag and volume restriction by the canopy over an explicit 3-D domain. We have used these features to show the effects of canopy structure on fluxes of momentum, heat, and water in heterogeneous environments at the tree-crown scale by modifying the canopy structure representing it as both homogeneous and realistically heterogeneous. We combine this with Hi-VACC's capabilities to model dispersion and chemistry of reactive VOCs to parameterize the fluxes of these reactive species with respect to canopy structure. The high resolution capabilities of Hi-VACC coupled with RAFLES allows for sensitivity analysis to determine important structural considerations in sub-grid-scale parameterization of these phenomena in larger models.

  17. Measuring sub-canopy evaporation in a forested wetland using an ensemble of methods

    Science.gov (United States)

    Allen, S. T.; Edwards, B.; Reba, M. L.; Keim, R.

    2013-12-01

    Evaporation from the sub-canopy water surface is an integral but understudied component of the water balance in forested wetlands. Previous studies have used eddy covariance, energy balance approaches, and water-table fluctuations to assess whole-system evapotranspiration. However, partitioning evaporation from transpiration is necessary for modeling the system because of different controls over each process. Sub-canopy evaporation is a physically controlled process driven by relatively small gradients in residual energy transmitted through the canopy. The low-energy sub-canopy environment is characterized by a spatiotemporally varying light environment due to sunflecks, small and often inverse temperature and vapor gradients, and a high capacity for heat storage in flood water, which each present challenges to common evapotranspiration measurement techniques. Previous studies have examined wetland surface evaporation rates with small lysimeter experiments, but this approach does not encapsulate micrometeorological processes occurring at the scale of natural wetlands. In this study, we examine a one year time series of in situ sub-canopy flux measurements from a seasonally flooded cypress-tupelo swamp in southeast Louisiana. Our objective is to apply these data towards modeling sub-canopy energy flux responses to intra-annual hydrologic, phenologic, and climatic cycles. To assess and mitigate potential errors due to the inherent measurement challenges of this environment, we utilized multiple measurement approaches including eddy covariance, Bowen ratio energy balance (with both air to air gradients and water surface to air gradients) and direct measurement using a floating evaporation pan. Preliminary results show that Bowen ratio energy balance measurements are useful for constraining evaporation measurements when low wind speed conditions create a non-ideal setting for eddy covariance. However, Bowen ratios were often highly erratic due to the weak temperature

  18. Forest canopy water fluxes can be estimated using canopy structure metrics derived from airborne light detection and ranging (LiDAR)

    DEFF Research Database (Denmark)

    Schumacher, Johannes; Christiansen, Jesper Riis

    2015-01-01

    throughfall (TF). We investigated the possibilities of estimating TF based on bulk Pr and canopy structure estimated from airborne light detection and ranging (LiDAR) data. Bulk Pr and TF fluxes combined with airborne LiDAR data from 11 locations representing the most common forest types (mono...... and a canopy density metric derived from LiDAR data. In all three types of TF data sets Pr was the variable explaining the majority of the variance in TF. The proportion of explained variance adhering to the LiDAR variable increased from 1.7% for the monthly data set to 12.2% and 19.5% for seasonal and annual...

  19. AREA-BASED SNOW DAMAGE CLASSIFICATION OF FOREST CANOPIES USING BI- TEMPORAL LIDAR DATA

    OpenAIRE

    M. Vastaranta; Korpela, I.; Uotila, A.; Hovi, A.; M. Holopainen

    2012-01-01

    Multitemporal LiDAR data provide means for mapping structural changes in forest canopies. We demonstrate the use of area-based estimation method for snow damage assessment. Change features of bi-temporal LiDAR point height distributions were used as predictors in combination with in situ training data. In the winter 2009–2010, snow damages occurred in Hyytiälä (62°N, 24°E), southern Finland. Snow load resulted in broken, bent and fallen trees changing the canopy structure. The damages w...

  20. Chlorophyll Fluorescence Emissions of Vegetation Canopies From High Resolution Field Reflectance Spectra

    Science.gov (United States)

    Middleton, E. M.; Corp, L. A.; Daughtry, C. S. T.; Campbell, P. K. Entcheva

    2006-01-01

    A two-year experiment was performed on corn (Zea mays L.) crops under nitrogen (N) fertilization regimes to examine the use of hyperspectral canopy reflectance information for estimating chlorophyll fluorescence (ChlF) and vegetation production. Fluorescence of foliage in the laboratory has proven more rigorous than reflectance for correlation to plant physiology. Especially useful are emissions produced from two stable red and far-red chlorophyll ChlF peaks centered at 685V10 nm and 735V5 nm. Methods have been developed elsewhere to extract steady state solar induced fluorescence (SF) from apparent reflectance of vegetation canopies/landscapes using the Fraunhofer Line Depth (FLD) principal. Our study utilized these methods in conjunction with field-acquired high spectral resolution canopy reflectance spectra obtained in 2004 and 2005 over corn crops, as part of an ongoing multi-year experiment at the USDA/Agriculture Research Service in Beltsville, MD. A spectroradiometer (ASD-FR Fieldspec Pro, Analytical Spectral Devices, Inc., Boulder, CO) was used to measure canopy radiances 1 m above plant canopies with a 22deg field of view and a 0deg nadir view zenith angle. Canopy and plant measurements were made at the R3 grain fill reproductive stage on 3-4 replicate N application plots provided seasonal inputs of 280, 140, 70, and 28 kg N/ha. Leaf level measurements were also made which included ChlF, photosynthesis, and leaf constituents (photosynthetic pigment, carbon (C), and N contents). Crop yields were determined at harvest. SIF intensities for ChlF were derived directly from canopy reflectance spectra in specific narrowband regions associated with atmospheric oxygen absorption features centered at 688 and 760 nm. The red/far-red S F ratio derived from these field reflectance spectra successfully discriminated foliar pigment levels (e.g., total chlorophyll, Chl) associated with N application rates in both corn crops. This canopy-level spectral ratio was also

  1. Ozone Flux Measurement and Modelling on Leaf/Shoot and Canopy Scale

    Directory of Open Access Journals (Sweden)

    Giacomo Gerosa

    2011-02-01

    Full Text Available The quantitative study of the ozone effects on agricultural and forest vegetation requires the knowledge of the pollutant dose absorbed by plants via leaf stomata, i.e. the stomatal flux. Nevertheless, the toxicologically effective dose can differ from the stomatal flux because a pool of scavenging and detoxification processes reduce the amount of pollutant responsible of the expression of the harmful effects. The measurement of the stomatal flux is not immediate and the quantification of the effective dose is still troublesome. The paper examines the conceptual aspects of ozone flux measurement and modelling in agricultural and ecological research. The ozone flux paradigm is conceptualized into a toxicological frame and faced at two different scales: leaf/shoot and canopy scales. Leaf and shoot scale flux measurements require gas-exchange enclosure techniques, while canopy scale flux measurements need a micrometeorological approach including techniques such as eddy covariance and the aerodynamical gradient. At both scales, not all the measured ozone flux is stomatal flux. In fact, a not negligible amount of ozone is destroyed on external plant surfaces, like leaf cuticles, or by gas phase reaction with biogenic volatile compounds. The stomatal portion of flux can be calculated from concurrent measurements of water vapour fluxes at both scales. Canopy level flux measurements require very fast sensors and the fulfilment of many conditions to ensure that the measurements made above the canopy really reflect the canopy fluxes (constant flux hypothesis. Again, adjustments are necessary in order to correct for air density fluctuations and sensor-surface alignment break. As far as regards flux modelling, at leaf level the stomatal flux is simply obtained by multiplying the ozone concentration on the leaf with the stomatal conductance predicted by means of physiological models fed by meteorological parameter. At canopy level the stomatal flux is

  2. Ozone Flux Measurement and Modelling on Leaf/Shoot and Canopy Scale

    Directory of Open Access Journals (Sweden)

    Ludger Grünhage

    2008-03-01

    Full Text Available The quantitative study of the ozone effects on agricultural and forest vegetation requires the knowledge of the pollutant dose absorbed by plants via leaf stomata, i.e. the stomatal flux. Nevertheless, the toxicologically effective dose can differ from the stomatal flux because a pool of scavenging and detoxification processes reduce the amount of pollutant responsible of the expression of the harmful effects. The measurement of the stomatal flux is not immediate and the quantification of the effective dose is still troublesome. The paper examines the conceptual aspects of ozone flux measurement and modelling in agricultural and ecological research. The ozone flux paradigm is conceptualized into a toxicological frame and faced at two different scales: leaf/shoot and canopy scales. Leaf and shoot scale flux measurements require gas-exchange enclosure techniques, while canopy scale flux measurements need a micrometeorological approach including techniques such as eddy covariance and the aerodynamical gradient. At both scales, not all the measured ozone flux is stomatal flux. In fact, a not negligible amount of ozone is destroyed on external plant surfaces, like leaf cuticles, or by gas phase reaction with biogenic volatile compounds. The stomatal portion of flux can be calculated from concurrent measurements of water vapour fluxes at both scales. Canopy level flux measurements require very fast sensors and the fulfilment of many conditions to ensure that the measurements made above the canopy really reflect the canopy fluxes (constant flux hypothesis. Again, adjustments are necessary in order to correct for air density fluctuations and sensor-surface alignment break. As far as regards flux modelling, at leaf level the stomatal flux is simply obtained by multiplying the ozone concentration on the leaf with the stomatal conductance predicted by means of physiological models fed by meteorological parameter. At canopy level the stomatal flux is

  3. Simulating ozone dry deposition at a boreal forest with a multi-layer canopy deposition model

    OpenAIRE

    Zhou, Putian; GANZEVELD Laurens; Rannik, Üllar; Zhou, Luxi; Gierens, Rosa; Taipale, Ditte; Mammarella, Ivan; Boy, Michael

    2016-01-01

    A multi-layer ozone (O3) dry deposition model has been implemented into SOSAA (a model to Simulate the concentrations of Organic vapours, Sulphuric Acid and Aerosols) to improve the representation of O3 within and above the forest canopy in the planetary boundary layer where O3 is a key oxidant agent of biogenic volatile organic compounds (BVOCs) and thus affecting organic aerosol processes. We aim to predict the O3 uptake by a boreal forest canopy under varying environmental conditions and a...

  4. Detecting Canopy Water Status Using Shortwave Infrared Reflectance Data From Polar Orbiting and Geostationary Platforms

    DEFF Research Database (Denmark)

    Fensholt, Rasmus; Huber Gharib, Silvia; Proud, Simon Richard;

    2010-01-01

    -based canopy water status detection from geostationary Meteosat Second Generation (MSG) Spinning Enhanced Visible and Infrared Imager (SEVIRI) data as compared to polar orbiting environmental satellite (POES)-based moderate resolution imaging spectroradiometer (MODIS) data. The EO-based SWIR water stress index...... (SIWSI) is evaluated against in situ measured canopy water content indicators at a semi-arid grassland savanna site in Senegal 2008. Daily SIWSI from both MODIS and SEVIRI data show an overall inverse relation to Normalized Difference Vegetation Index (NDVI) throughout the growing season. SIWSI...

  5. Effect of canopy density on litter invertebrate community structure in pine forests

    OpenAIRE

    Brygadyrenko Viktor V.

    2016-01-01

    We investigated the structure of the litter invertebrate community in 141 pine (Pinus sylvestris Linnaeus, 1753) forest sites with five variants of canopy density (30-44, 45-59, 60-74, 75-89 and 90-100%) in the steppe zone of Ukraine. The total number of litter macrofauna specimens collected at each site decreased from an average of 84/100 trap-days in the sparsest stands (30-40% density) to 4-39 specimens/100 trap-days in the forests with a denser canopy. The number of macrofauna species cau...

  6. Mapping forest canopy fuels in Yellowstone National Park using lidar and hyperspectral data

    Science.gov (United States)

    Halligan, Kerry Quinn

    The severity and size of wildland fires in the forested western U.S have increased in recent years despite improvements in fire suppression efficiency. This, along with increased density of homes in the wildland-urban interface, has resulted in high costs for fire management and increased risks to human health, safety and property. Crown fires, in comparison to surface fires, pose an especially high risk due to their intensity and high rate of spread. Crown fire models require a range of quantitative fuel parameters which can be difficult and costly to obtain, but advances in lidar and hyperspectral sensor technologies hold promise for delivering these inputs. Further research is needed, however, to assess the strengths and limitations of these technologies and the most appropriate analysis methodologies for estimating crown fuel parameters from these data. This dissertation focuses on retrieving critical crown fuel parameters, including canopy height, canopy bulk density and proportion of dead canopy fuel, from airborne lidar and hyperspectral data. Remote sensing data were used in conjunction with detailed field data on forest parameters and surface reflectance measurements. A new method was developed for retrieving Digital Surface Model (DSM) and Digital Canopy Models (DCM) from first return lidar data. Validation data on individual tree heights demonstrated the high accuracy (r2 0.95) of the DCMs developed via this new algorithm. Lidar-derived DCMs were used to estimate critical crown fire parameters including available canopy fuel, canopy height and canopy bulk density with linear regression model r2 values ranging from 0.75 to 0.85. Hyperspectral data were used in conjunction with Spectral Mixture Analysis (SMA) to assess fuel quality in the form of live versus dead canopy proportions. Severity and stage of insect-caused forest mortality were estimated using the fractional abundance of green vegetation, non-photosynthetic vegetation and shade obtained from

  7. Travelling waves above the canopy of aquatic vegetation

    Science.gov (United States)

    Lyubimov, D.; Lyubimova, T.; Baidina, D.

    2012-04-01

    When fluid moves over a saturated porous medium with high permeability and porosity, the flow partially involves the fluid in porous medium, however, because of the great resistance force there arises sharp drop of tangential velocity. This leads to the development of instability similar to the Kelvin-Helmholtz instability on discontinuity surface of the tangential velocities of homogeneous fluids. Analogy becomes even more complete if we take into account the deformability of porous medium under the influence of pressure changes. Intensive vortices above the canopy of aquatic vegetation can lead to the coherent oscillations of vegetation, such traveling waves are called monami [1]. In the present paper we investigate stability of steady flow over a saturated porous medium. The importance of this problem is related to the applications to the dynamics of pollutants in the bottom layer of vegetation: the accumulation at low flow and salvo emissions with increasing velocity. We consider a two-layer system consisting of a layer of a viscous incompressible fluid and porous layer saturated with the same fluid located underneath. The lower boundary of the system is assumed to be rigid, the upper boundary - free and non-deformable. Weak slope of the river is taken into account. The problem is solved within the framework of single approach in which a two-layer system is described by a single system of equations for saturated porous medium and the presence of two layers is modeled by introducing variable permeability and porosity, depending on vertical coordinate. The flow in a saturated porous medium is described by the Brinkman model. Solution of the problem for steady flow shows that the velocity profile has two inflection points, which leads to the instability. The neutral curves are obtained for different values of the ratio d of porous layer thickness to full thickness. It is found that the dependence of critical Reynolds number on d is non-monotonic and the wave

  8. Changes in radiative properties of soot contaminated maize canopy

    Science.gov (United States)

    Illes, B.; Anda, A.

    2012-04-01

    always proved statistically. Albedo reduced significantly in the polluted maize stand. Decline in reflectance of maize with soot cause an increase in net radiation. The latent heat of soot contaminated plants was higher, in contrast to the sensible heat. The ability of soot to absorb irradiation increased the absolute values of energy (latent and sensible heat fluxes) in polluted canopy. The Bowen ratio of polluted crops declined below the control values, probably because it was a dry summer, except a few days. Season of 2011 was characteristic of arid, dry summer minimum rainfall. This article was made under the project TÁMOP-4.2.1/B-09/1/KONV-2010-0003 and TÁMOP-4.2.2/B-10/1-2010-0025. These projects are supported by the European Union and co-financed by the European Social Fund.

  9. A Photogrammetric Workflow for the Creation of a Forest Canopy Height Model from Small Unmanned Aerial System Imagery

    Directory of Open Access Journals (Sweden)

    Philippe Lejeune

    2013-11-01

    Full Text Available The recent development of operational small unmanned aerial systems (UASs opens the door for their extensive use in forest mapping, as both the spatial and temporal resolution of UAS imagery better suit local-scale investigation than traditional remote sensing tools. This article focuses on the use of combined photogrammetry and “Structure from Motion” approaches in order to model the forest canopy surface from low-altitude aerial images. An original workflow, using the open source and free photogrammetric toolbox, MICMAC (acronym for Multi Image Matches for Auto Correlation Methods, was set up to create a digital canopy surface model of deciduous stands. In combination with a co-registered light detection and ranging (LiDAR digital terrain model, the elevation of vegetation was determined, and the resulting hybrid photo/LiDAR canopy height model was compared to data from a LiDAR canopy height model and from forest inventory data. Linear regressions predicting dominant height and individual height from plot metrics and crown metrics showed that the photogrammetric canopy height model was of good quality for deciduous stands. Although photogrammetric reconstruction significantly smooths the canopy surface, the use of this workflow has the potential to take full advantage of the flexible revisit period of drones in order to refresh the LiDAR canopy height model and to collect dense multitemporal canopy height series.

  10. Exploring the spatial distribution of light interception and photosynthesis of canopies by means of a functional-structural plant model

    NARCIS (Netherlands)

    Sarlikioti, V.; Visser, de P.H.B.; Marcelis, L.F.M.

    2011-01-01

    Background and Aims - At present most process-based models and the majority of three-dimensional models include simplifications of plant architecture that can compromise the accuracy of light interception simulations and, accordingly, canopy photosynthesis. The aim of this paper is to analyse canopy

  11. 30 CFR 75.1710-1 - Canopies or cabs; self-propelled diesel-powered and electric face equipment; installation...

    Science.gov (United States)

    2010-07-01

    ... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Canopies or cabs; self-propelled diesel-powered... STANDARDS-UNDERGROUND COAL MINES Miscellaneous § 75.1710-1 Canopies or cabs; self-propelled diesel-powered... this section, all self-propelled diesel-powered and electric face equipment, including shuttle...

  12. Canopy BRF simulation of forest with different crown shape and height in larger scale based on Radiosity method

    Science.gov (United States)

    Song, Jinling; Qu, Yonghua; Wang, Jindi; Wan, Huawei; Liu, Xiaoqing

    2007-06-01

    Radiosity method is based on the computer simulation of 3D real structures of vegetations, such as leaves, branches and stems, which are composed by many facets. Using this method we can simulate the canopy reflectance and its bidirectional distribution of the vegetation canopy in visible and NIR regions. But with vegetations are more complex, more facets to compose them, so large memory and lots of time to calculate view factors are required, which are the choke points of using Radiosity method to calculate canopy BRF of lager scale vegetation scenes. We derived a new method to solve the problem, and the main idea is to abstract vegetation crown shapes and to simplify their structures, which can lessen the number of facets. The facets are given optical properties according to the reflectance, transmission and absorption of the real structure canopy. Based on the above work, we can simulate the canopy BRF of the mix scenes with different species vegetation in the large scale. In this study, taking broadleaf trees as an example, based on their structure characteristics, we abstracted their crowns as ellipsoid shells, and simulated the canopy BRF in visible and NIR regions of the large scale scene with different crown shape and different height ellipsoids. Form this study, we can conclude: LAI, LAD the probability gap, the sunlit and shaded surfaces are more important parameter to simulate the simplified vegetation canopy BRF. And the Radiosity method can apply us canopy BRF data in any conditions for our research.

  13. Dynamics of leaf area index and canopy openness of three forest types in a warm temperate zone

    Institute of Scientific and Technical Information of China (English)

    Weiguo SANG; Sha CHEN; Guangqi LI

    2008-01-01

    Deciduous broad-leaved forests (DBF), Larix principis-rupprechtii (LF) and Pinus tabulaeformis planta-tions (PF) are three typical forest communities in the warm temperate zone of the Dongling Mountains. In this study, we used an indirect method, hemispheric pho-tography, to measure and analyze the dynamics of leaf area index (LAI) and canopy openness of the three forest communities. The results show that the LAI values of DBF and LF increased gradually with plant growth and development. The highest LAI value appeared in August, while canopy openness changed inversely with LAI. The lowest value appeared in November. DBF maintained a higher LAI in August and had a more open canopy in November compared with LF. For PF, we observed little changes in the LAI and canopy openness which was attributed to the leaf retention of this evergreen species. However, a similar relation between LAI and canopy openness was found for the three forest communities: canopy openness varied inversely with LAI. The relation is exponential and significant. Therefore, canopy open-ness is a good indicator of LAI in forests. This result can be used to test the validity of the LAI based on remote sensing and to provide a reference for the study of the canopy heterogeneity and its effect. This also benefits modeling for fluxes of carbon, water and energy from the level of the stand to landscape.

  14. Modeling photosynthesis of discontinuous plant canopies by linking the Geometric Optical Radiative Transfer model with biochemical processes

    Science.gov (United States)

    Xin, Q.; Gong, P.; Li, W.

    2015-06-01

    Modeling vegetation photosynthesis is essential for understanding carbon exchanges between terrestrial ecosystems and the atmosphere. The radiative transfer process within plant canopies is one of the key drivers that regulate canopy photosynthesis. Most vegetation cover consists of discrete plant crowns, of which the physical observation departs from the underlying assumption of a homogenous and uniform medium in classic radiative transfer theory. Here we advance the Geometric Optical Radiative Transfer (GORT) model to simulate photosynthesis activities for discontinuous plant canopies. We separate radiation absorption into two components that are absorbed by sunlit and shaded leaves, and derive analytical solutions by integrating over the canopy layer. To model leaf-level and canopy-level photosynthesis, leaf light absorption is then linked to the biochemical process of gas diffusion through leaf stomata. The canopy gap probability derived from GORT differs from classic radiative transfer theory, especially when the leaf area index is high, due to leaf clumping effects. Tree characteristics such as tree density, crown shape, and canopy length affect leaf clumping and regulate radiation interception. Modeled gross primary production (GPP) for two deciduous forest stands could explain more than 80% of the variance of flux tower measurements at both near hourly and daily timescales. We demonstrate that ambient CO2 concentrations influence daytime vegetation photosynthesis, which needs to be considered in biogeochemical models. The proposed model is complementary to classic radiative transfer theory and shows promise in modeling the radiative transfer process and photosynthetic activities over discontinuous forest canopies.

  15. A joined role of canopy and reversal cells in bone remodeling - Lessons from glucocorticoid-induced osteoporosis

    DEFF Research Database (Denmark)

    Jensen, Pia Rosgaard; Andersen, Thomas Levin; Hauge, Ellen-Margrethe;

    2015-01-01

    Successful bone remodeling demands that osteoblasts restitute the bone removed by osteoclasts. In human cancellous bone, a pivotal role in this restitution is played by the canopies covering the bone remodeling surfaces, since disruption of canopies in multiple myeloma, postmenopausal- and glucoc......Successful bone remodeling demands that osteoblasts restitute the bone removed by osteoclasts. In human cancellous bone, a pivotal role in this restitution is played by the canopies covering the bone remodeling surfaces, since disruption of canopies in multiple myeloma, postmenopausal....... In postmenopausal osteoporosis, this concept is supported by the coincidence between the absence of canopies and scarcity of cells on reversal surfaces together with abortion of the remodeling cycle. Here we tested whether this concept holds true in glucocorticoid-induced osteoporosis. A histomorphometric analysis...

  16. Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: NLCD 2001 Tree Canopy

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This tabular data set represents the mean percent tree canopy from the Canopy Layer of the National Land Cover Dataset 2001 (LaMotte and Wieczorek, 2010), compiled...

  17. Sweet Pepper (Capsicum annuum L.) Canopy Photosynthesis Modeling Using 3D Plant Architecture and Light Ray-Tracing.

    Science.gov (United States)

    Kim, Jee Hoon; Lee, Joon Woo; Ahn, Tae In; Shin, Jong Hwa; Park, Kyung Sub; Son, Jung Eek

    2016-01-01

    Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L.) with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada). The light curves and A/C i curve of each layer were measured to parameterize the Farquhar, von Caemmerer, and Berry (FvCB) model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant's photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions.

  18. Sweet Pepper (Capsicum annuum L.) Canopy Photosynthesis Modeling Using 3D Plant Architecture and Light Ray-Tracing.

    Science.gov (United States)

    Kim, Jee Hoon; Lee, Joon Woo; Ahn, Tae In; Shin, Jong Hwa; Park, Kyung Sub; Son, Jung Eek

    2016-01-01

    Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L.) with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada). The light curves and A/C i curve of each layer were measured to parameterize the Farquhar, von Caemmerer, and Berry (FvCB) model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant's photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions. PMID:27667994

  19. Sweet Pepper (Capsicum annuum L.) Canopy Photosynthesis Modeling Using 3D Plant Architecture and Light Ray-Tracing

    Science.gov (United States)

    Kim, Jee Hoon; Lee, Joon Woo; Ahn, Tae In; Shin, Jong Hwa; Park, Kyung Sub; Son, Jung Eek

    2016-01-01

    Canopy photosynthesis has typically been estimated using mathematical models that have the following assumptions: the light interception inside the canopy exponentially declines with the canopy depth, and the photosynthetic capacity is affected by light interception as a result of acclimation. However, in actual situations, light interception in the canopy is quite heterogenous depending on environmental factors such as the location, microclimate, leaf area index, and canopy architecture. It is important to apply these factors in an analysis. The objective of the current study is to estimate the canopy photosynthesis of paprika (Capsicum annuum L.) with an analysis of by simulating the intercepted irradiation of the canopy using a 3D ray-tracing and photosynthetic capacity in each layer. By inputting the structural data of an actual plant, the 3D architecture of paprika was reconstructed using graphic software (Houdini FX, FX, Canada). The light curves and A/Ci curve of each layer were measured to parameterize the Farquhar, von Caemmerer, and Berry (FvCB) model. The difference in photosynthetic capacity within the canopy was observed. With the intercepted irradiation data and photosynthetic parameters of each layer, the values of an entire plant's photosynthesis rate were estimated by integrating the calculated photosynthesis rate at each layer. The estimated photosynthesis rate of an entire plant showed good agreement with the measured plant using a closed chamber for validation. From the results, this method was considered as a reliable tool to predict canopy photosynthesis using light interception, and can be extended to analyze the canopy photosynthesis in actual greenhouse conditions. PMID:27667994

  20. Field test of an open system to measure canopy gas exchange

    Science.gov (United States)

    Measurements of CO2 and H2O fluxes of crop plants are essential to understanding the impacts of environmental variables on crop productivity. A portable, CETA (Canopy Evapo-Transpiration and Assimilation) chamber system was built and evaluated at Big Spring, TX. This chamber system is an open or f...

  1. Transmission and conversion of magnetoacoustic waves on the magnetic canopy in a quiet Sun region

    CERN Document Server

    Kontogiannis, Ioannis; Tziotziou, Kostas

    2014-01-01

    We present evidence for the conversion and transmission of wave modes on the magnetic flux tubes that constitute mottles and form the magnetic canopy in a quiet Sun region, highlighting the details and key parameters of the mechanism that produces power halos and magnetic shadows at the magnetic network observed in H{\\alpha}. We use calculations of the magnetic field vector and the height of the magnetic canopy and simple assumptions to determine the turning height, i.e., the height at which the fast magneto-acoustic waves reflect. We compare the variation of acoustic power in the magnetic shadow and the power halo with the results of a two-dimensional model on mode conversion and transmission. The key parameter of the model is the attack angle, which is related to the inclination of the magnetic field vector at the canopy height. Our analysis takes also into account that 1) there are projection effects on the propagation of waves, 2) the magnetic canopy and the turning height are curved layers, 3) waves with...

  2. Regeneration in bottomland forest canopy gaps 6 years after variable retention harvests to enhance wildlife habitat

    Science.gov (United States)

    Twedt, Daniel J.; Somershoe, Scott G.; Guldin, James M.

    2013-01-01

    To promote desired forest conditions that enhance wildlife habitat in bottomland forests, managers prescribed and implemented variable-retention harvest, a.k.a. wildlife forestry, in four stands on Tensas River National Wildlife Refuge, LA. These treatments created canopy openings (gaps) within which managers sought to regenerate shade-intolerant trees. Six years after prescribed harvests, we assessed regeneration in 41 canopy gaps and 4 large (>0.5-ha) patch cut openings that resulted from treatments and in 21 natural canopy gaps on 2 unharvested control stands. Mean gap area of anthropogenic gaps (582 m²) was greater than that of natural gaps (262 m²). Sweetgum (Liquidambar styraciflua) and red oaks (Quercus nigra, Q. nuttallii, and Q. phellos) were common in anthropogenic gaps, whereas elms (Ulmus spp.) and sugarberry (Celtis laevigata) were numerous in natural gaps. We recommend harvest prescriptions include gaps with diameter >25 m, because the proportion of shade-intolerant regeneration increased with gap area up to 500 m². The proportion of shade-intolerant definitive gap fillers (individuals likely to occupy the canopy) increased with gap area: 35 percent in natural gaps, 54 percent in anthropogenic gaps, and 84 percent in patch cuts. Sweetgum, green ash (Fraxinus pennsylvanica), and red oaks were common definitive gap fillers.

  3. The impact of high resolution surface properties retrieved from Satellite in the urban canopy model

    International Nuclear Information System (INIS)

    This study aims to improve the atmospheric boundary condition in mesoscale model by satellite derived-land surface temperature. We have performed the WRF-UCM (Urban Canopy Model) using land surface temperature (LST) retrieved from MODIS satellite data. We evaluate the performance of the coupled WRF-UCM modeling system using LST against surface observation in Seoul, South Korea

  4. A Note on Two-Equation Closure Modelling of Canopy Flow

    DEFF Research Database (Denmark)

    Sogachev, Andrey

    2009-01-01

    The note presents a rational approach to modelling the source/sink due to vegetation or buoyancy effects that appear in the turbulent kinetic energy, E, equation and a supplementary equation for a length-scale determining variable, φ, when two-equation closure is applied to canopy and atmospheric...

  5. Modifying the University of Missouri corn canopy sensor algorithm using soil and weather information

    Science.gov (United States)

    Corn production across the U.S. Corn belt can be often limited by the loss of nitrogen (N) due to leaching, volatilization and denitrification. The use of canopy sensors for making in-season N fertilizer applications has been proven effective in matching plant N requirements with periods of rapid N ...

  6. The impact of forest canopy structure on simulations of atmosphere-biosphere NO

    NARCIS (Netherlands)

    Firanj, Ana; Lalic, Branislava; Ganzeveld, Laurens; Podrascanin, Zorica

    2015-01-01

    The concentrations and fluxes of reactive nitrogen species in the land-atmosphere system are controlled by complex interactions between emissions, turbulent transfer, dry deposition and chemical transformations. The forest canopy can significantly affect turbulent fluxes between the atmosphere, t

  7. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain

    NARCIS (Netherlands)

    Bischof, K; Peralta, G; Krabs, G; van de Poll, WH; Perez-Llorens, JL; Breeman, AM

    2002-01-01

    Within the sheltered creeks of Cadiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA d

  8. Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain

    NARCIS (Netherlands)

    Bischof, K.; Peralta, G.; Kräbs, G.; van de Poll, W.H.; Lucas Pérez-Lloréns, J.; Breeman, A.M.

    2002-01-01

    Within the sheltered creeks of Cádiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA d

  9. Testing the Application of Terrestrial Laser Scanning to Measure Forest Canopy Gap Fraction

    Directory of Open Access Journals (Sweden)

    F. Mark Danson

    2013-06-01

    Full Text Available Terrestrial laser scanners (TLS have the potential to revolutionise measurement of the three-dimensional structure of vegetation canopies for applications in ecology, hydrology and climate change. This potential has been the subject of recent research that has attempted to measure forest biophysical variables from TLS data, and make comparisons with two-dimensional data from hemispherical photography. This research presents a systematic comparison between forest canopy gap fraction estimates derived from TLS measurements and hemispherical photography. The TLS datasets used in the research were obtained between April 2008 and March 2009 at Delamere Forest, Cheshire, UK. The analysis of canopy gap fraction estimates derived from TLS data highlighted the repeatability and consistency of the measurements in comparison with those from coincident hemispherical photographs. The comparison also showed that estimates computed considering only the number of hits and misses registered in the TLS datasets were consistently lower than those estimated from hemispherical photographs. To examine this difference, the potential information available in the intensity values recorded by TLS was investigated and a new method developed to estimate canopy gap fraction proposed. The new approach produced gap fractions closer to those estimated from hemispherical photography, but the research also highlighted the limitations of single return TLS data for this application.

  10. The gap probability model for canopy thermal infrared emission with non-scattering approximation

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    To describe canopy emitting thermal radiance precisely and physically is one of the key researches in retrieving land surface temperature (LST) over vegetation-covered regions by remote sensing technology.This work is aimed at establishing gap probability models to describe the thermal emission characteristics in continuous plant,including the basic model and the sunlit model.They are suitable respectively in the nighttime and in the daytime.The sunlit model is the basic model plus a sunlit correcting item which takes the hot spot effect into account.The researches on the directional distribution of radiance and its relationship to canopy structural parameters,such as the leaf area index (LAI) and leaf angle distribution (LAD),were focused.The characteristics of directional radiance caused by temperature differences among components in canopy,such as those between leaf and soil,and between sunlit leaf or soil and shadowed leaf or soil,were analyzed.A well fitting between experimental data and the theoretical calculations shows that the models are able to illustrate the canopy thermal emission generally.

  11. Comparison of deep percolation rates below contrasting land covers with a joint canopy and soil model

    Science.gov (United States)

    Domínguez, C. G.; Pryet, A.; García Vera, M.; Gonzalez, A.; Chaumont, C.; Tournebize, J.; Villacis, M.; d'Ozouville, N.; Violette, S.

    2016-01-01

    A Rutter-type canopy interception model is combined with a 1-D physically-based soil water flow model to compare deep percolation rates below distinct land covers. The joint model allows the quantification of both evaporation and transpiration rates as well as deep percolation from vegetation and soil characteristics. Experimental observations are required to constitute the input and calibration datasets. An appropriate monitoring design is described which consists in meteorological monitoring together with throughfall and soil water tension measurements. The methodology is illustrated in Santa Cruz Island in the Galapagos Archipelago, which has been affected by significant land use changes. Two adjacent study plots are investigated: a secondary forest and a pasture. The results of the model reveal that evaporation of canopy interception is higher in the pasture due to the bigger canopy storage capacity, which promotes evaporation against canopy drainage. This is however compensated by higher transpiration in the secondary forest, due to the smaller surface resistance. As a consequence, total evapotranspiration is similar for the two plots and no marked difference in deep percolation can be observed. In both cases, deep percolation reaches ca. 2 m/year which corresponds to 80% of the incoming rainfall. This methodology not only allows the quantification of deep percolation, but can also be used to identify the controlling factors of deep percolation under contrasting land covers.

  12. Modelling canopy and litter interception in commercial forest plantations in South Africa

    Directory of Open Access Journals (Sweden)

    H. H. Bulcock

    2012-07-01

    Full Text Available There is a gap in the knowledge of both canopy and litter interception in South African forest hydrology. Interception is typically considered to constitute only a small portion of the total evaporation and in some models is disregarded. Interception is a threshold process, as a certain amount of water is required before successive processes can take place. Therefore an error introduced in modelling interception, especially disregarding it, will automatically introduce errors in the calibration of subsequent models/processes. Field experiments to assess these processes, viz. canopy and litter interception were established for the three main commercial forestry genera in South Africa, namely, Pinus, Acacia and Eucalyptus. Drawing on both field and laboratory data, the "variable storage Gash" model for canopy interception and an idealised drying curve litter interception model were developed to represent these processes. It was found that canopy and litter interception can account for as much as 26.6% and 13.4% of gross precipitation, respectively, and are therefore important hydrological processes. The models developed were able to adequately represent these interception processes and provide a way forward for more representative water resources planning modelling.

  13. Implementation of a canopy air space scheme into the Community Land Model

    Science.gov (United States)

    Xu, M.; Hoffman, F. M.

    2015-12-01

    A single-layer Canopy Air Space Scheme (CASS) is implemented into the Community Land Surface Model version 4.5 (CLM4.5) in this study. It considers the canopy storages for heat, water, and trace gases that are generally neglected in the CLM4.5 surface flux calculation algorithm. Moreover, the CASS introduces prognostic equations for the surface variables and eliminates the CLM4.5 Crank-Nicolson iterative solution for computing surface skin temperature, which usually brings residual errors into the model and causes numerical instability. Two off-line simulations (one with the CASS and the other with the origin CLM4.5 scheme) were conducted and their results were compared with the FLUXNET observations. Preliminary results show that compared with the origin CLM4.5 scheme, the CASS has similar or better skills in representing land surface exchanges for heat, water and carbon under several biome types. The implementation of the CASS into the CLM4.5 not only improves the land model skills, but also provides a modeling framework to incorporate more complex canopy processes into the land surface model, such as bi-directional emission schemes for various trace gases and multi-layer canopy energy balance models.

  14. Premature loss of bone remodeling compartment canopies is associated with deficient bone formation

    DEFF Research Database (Denmark)

    Jensen, Pia Rosgaard; Andersen, Thomas Levin; Søe, Kent;

    2011-01-01

    support to this hypothesis by analyzing the changes in prevalence of BRC canopies during the progress of the remodeling cycle in a cohort of healthy individuals and in patients with endogenous Cushing's syndrome (CS), and by relating these changes in prevalence with the extent of bone forming surfaces...

  15. Modelling canopy and litter interception in commercial forest plantations in South Africa

    Science.gov (United States)

    Bulcock, H. H.; Jewitt, G. P. W.

    2012-07-01

    There is a gap in the knowledge of both canopy and litter interception in South African forest hydrology. Interception is typically considered to constitute only a small portion of the total evaporation and in some models is disregarded. Interception is a threshold process, as a certain amount of water is required before successive processes can take place. Therefore an error introduced in modelling interception, especially disregarding it, will automatically introduce errors in the calibration of subsequent models/processes. Field experiments to assess these processes, viz. canopy and litter interception were established for the three main commercial forestry genera in South Africa, namely, Pinus, Acacia and Eucalyptus. Drawing on both field and laboratory data, the "variable storage Gash" model for canopy interception and an idealised drying curve litter interception model were developed to represent these processes. It was found that canopy and litter interception can account for as much as 26.6% and 13.4% of gross precipitation, respectively, and are therefore important hydrological processes. The models developed were able to adequately represent these interception processes and provide a way forward for more representative water resources planning modelling.

  16. Rising ozone concentrations decrease soybean evapotranspiration and water use efficiency whilst increasing canopy temperature.

    Science.gov (United States)

    VanLoocke, Andy; Betzelberger, Amy M; Ainsworth, Elizabeth A; Bernacchi, Carl J

    2012-07-01

    • Here, we investigated the effects of increasing concentrations of ozone ([O(3)]) on soybean canopy-scale fluxes of heat and water vapor, as well as water use efficiency (WUE), at the Soybean Free Air Concentration Enrichment (SoyFACE) facility. • Micrometeorological measurements were made to determine the net radiation (R(n)), sensible heat flux (H), soil heat flux (G(0)) and latent heat flux (λET) of a commercial soybean (Glycine max) cultivar (Pioneer 93B15), exposed to a gradient of eight daytime average ozone concentrations ranging from approximately current (c. 40 ppb) to three times current (c. 120 ppb) levels. • As [O(3)] increased, soybean canopy fluxes of λET decreased and H increased, whereas R(n) and G(0) were not altered significantly. Exposure to increased [O(3)] also resulted in warmer canopies, especially during the day. The lower λET decreased season total evapotranspiration (ET) by c. 26%. The [O(3)]-induced relative decline in ET was half that of the relative decline in seed yield, driving a 50% reduction in seasonal WUE. • These results suggest that rising [O(3)] will alter the canopy energy fluxes that drive regional climate and hydrology, and have a negative impact on productivity and WUE, key ecosystem services. PMID:22524697

  17. Hyperspectral indices for detecting changes in canopy reflectance as a result of underground natural gas leakage

    NARCIS (Netherlands)

    Noomen, M.F.; Smith, K.L.; Colls, J.J.; Steven, M.D.; Skidmore, A.K.; Meer, van der F.D.

    2008-01-01

    Natural gas leakage from underground pipelines is known to affect vegetation adversely, probably by displacement of the soil oxygen needed for respiration. This causes changes in plant and canopy reflectance, which may serve as indicators of gas leakage. In this study, a covariance analysis was perf

  18. Integrating soil and weather information into canopy sensor algorithms for improved corn nitrogen rate recommendation

    Science.gov (United States)

    Corn production can be often limited by the loss of nitrogen (N) due to leaching, volatilization and denitrification. The use of canopy sensors for making in-season N fertilizer applications has been proven effective in matching plant N requirements with periods of rapid N uptake (V7-V11), reducing ...

  19. The effects of the canopy created velocity inflection in the wake development

    Science.gov (United States)

    Agafonova, O.; Avramenko, A.; Chaudhari, A.; Hellsten, A.

    2016-06-01

    The aim of this paper is to study the effects of forest on the turbine wakes. Initially, the ACL (actuator line) model as well as a Canopy model are validated with the experiments separately. The models are further applied to simulate the flow over two wind turbines in a row located within the forest.

  20. Sealed environment chamber for canopy light interception and trace hydrocarbon analyses

    Science.gov (United States)

    Dixon, M. A.; Grodzinski, B.; Côté, R.; Stasiak, M.

    1999-01-01

    Two sealed chambers were constructed, each measuring approximately 4.5 m × 3 m × 2.5 m (L×W×H). Heat exchangers and air handling components were integrated within the sealed environment. Construction materials were chosen to minimize off-gassing and oxidation. Acceptable materials included stainless steel, TeflonTM, glass and HeresiteTM or baked enamel coated metal parts. The glass-topped chambers have externally mounted microwave powered light sources providing minimum PAR at canopy level of 1000 μm.m-2.s-1. Major gases (CO2, O2) were monitored. Other environmental variables relevant to plant production (humidity, temperature, nutrient solution) were monitored and controlled continuously. Typical environment control capability and system specifications are presented. The facility is described as a venue ideally suited to address specific research objectives in plant canopy light interception, such as the roles of novel microwave powered overhead and inner-canopy light sources for dense plant canopies. In addition, control of recycled hydroponic nutrient solutions and analysis of trace atmospheric hydrocarbons in the context of sealed environment life support can be concurrently monitored.

  1. Canopy photosynthesis and transpiration in microgravity: gas exchange measurements aboard Mir.

    Science.gov (United States)

    Monje, O; Bingham, G E; Carman, J G; Campbell, W F; Salisbury, F B; Eames, B K; Sytchev, V; Levinskikh, M A; Podolsky, I

    2000-01-01

    The SVET Greenhouse on-board the Orbital Station Mir was used to measure canopy photosynthesis and transpiration rates for the first time in space. During the Greenhouse IIB experiment on Mir (June-January 1997), carbon and water vapor fluxes from two wheat (cv. Superdwarf) canopies were measured using the US developed Gas Exchange Measurement System (GEMS). Gas analyzers capable of resolving CO2 concentration differences of 5 micromoles mol-1 against a background of 0.9% CO2, are necessary to measure photosynthetic and respiratory rates on Mir. The ability of the GEMS gas analyzers to measure these CO2 concentration differences was determined during extensive ground calibrations. Similarly, the sensitivity of the analyzers to water vapor was sufficient to accurately measure canopy evapotranspiration. Evapotranspiration, which accounted for over 90% of the water added to the root zone, was estimated using gas exchange and used to estimate substrate moisture content. This paper presents canopy photosynthesis and transpiration data during the peak vegetative phase of development in microgravity. PMID:11543166

  2. Theory of radiative transfer models applied in optical remote sensing of vegetation canopies.

    NARCIS (Netherlands)

    Verhoef, W.

    1998-01-01

    In this thesis the work of the author on the modelling of radiative transfer in vegetation canopies and the terrestrial atmosphere is summarized. The activities span a period of more than fifteen years of research in this field carried out at the National Aerospace Laboratory NLR.For the interpretat

  3. Spectral reflectance from plant canopies and optimum spectral channels in the near infrared

    Science.gov (United States)

    Allen, W. A.; Gausman, H. W.; Wiegand, C. L.

    1970-01-01

    Theoretical and experimental aspects of the interaction of light with a typical plant canopy are considered. Both theoretical and experimental results are used to establish optimum electromagnetic wavelength channels for remote sensing in agriculture. The spectral range considered includes half of the visible and much of the near-infrared regions.

  4. Acclimation of Photosynthesis to Light and Canopy Nitrogen Distribution: an Interpretation

    OpenAIRE

    Thornley, J. H. M.

    2004-01-01

    • Background and Aims Acclimation of photosynthesis to light and its connection with canopy nitrogen (N) distribution are considered. An interpretation of a proportionality between light‐saturated photosynthesis and local averaged leaf irradiance is proposed by means of a simple model.

  5. Canopy cover and leaf area index relationships for wheat, triticale, and corn

    Science.gov (United States)

    The AquaCrop model requires canopy cover (CC) measurements to define crop growth and development. Some previously collected data sets that would be useful for calibrating and validating AquaCrop contain only leaf area index (LAI) data, but could be used if relationships were available relating LAI t...

  6. Economic and Environmental Benefits of Canopy Sensing for Variable-Rate Nitrogen Corn Fertilization

    Science.gov (United States)

    Nitrogen (N) available to support corn production can be highly variable within fields. Canopy reflectance sensing for assessing crop N health has been proposed as a technology on which to base top-dress variable-rate N application. The objective of this research in Missouri and Nebraska was to eval...

  7. Promoting low-canopy macrophytes to compromise conservation and recreational navigation in a shallow lake

    NARCIS (Netherlands)

    Coops, H.; Nes, van E.H.; Berg, van den M.S.; Butijn, G.D.

    2002-01-01

    The shift from a turbid-water state to a clear macrophyte-dominated state in the shallow lake Veluwemeer (The Netherlands) has led to nuisance for recreational navigation. The nuisance concerns the dense beds of Potamogeton perfoliatus in particular, whereas the low-canopy forming charophytes cause

  8. Canopy and physiological controls of GPP during drought and heat wave

    Science.gov (United States)

    Zhang, Yao; Xiao, Xiangming; Zhou, Sha; Ciais, Philippe; McCarthy, Heather; Luo, Yiqi

    2016-04-01

    Vegetation indices (VIs) derived from satellite reflectance measurements are often used as proxies of canopy activity to evaluate the impacts of drought and heat wave on gross primary production (GPP) through production efficiency models. However, GPP is also regulated by physiological processes that cannot be directly detected using reflectance measurements. This study analyzes the co-limitation of canopy and plant physiology (represented by VIs and climate anomalies, respectively) on GPP during the 2003 European summer drought and heat wave for 15 Euroflux sites. During the entire drought period, spatial pattern of GPP anomalies can be quantified by relative changes in VIs. We also find that GPP sensitivity to relative canopy changes is higher for nonforest ecosystems (1.81 ± 0.32%GPP/%enhanced vegetation index), while GPP sensitivity to physiological changes is higher for forest ecosystems (-0.18 ± 0.05 g C m-2 d-1/hPa). A conceptual model is further built to better illustrate the canopy and physiological controls on GPP during drought periods.

  9. Efficiency of light energy used by leaves situated in different levels of a sweet pepper canopy

    NARCIS (Netherlands)

    Dueck, T.A.; Grashoff, C.; Broekhuijsen, A.G.M.; Marcelis, L.F.M.

    2006-01-01

    In order to make the most use of the available light in glasshouse crops, measurements of light penetration, leaf photosynthesis, respiration and transpiration were performed at five levels in a sweet paper canopy at two commercial farms, from July to November 2004. Light response curves of leaf pho

  10. Estimating maize water stress by standard deviation of canopy temperature in thermal imagery

    Science.gov (United States)

    A new crop water stress index using standard deviation of canopy temperature as an input was developed to monitor crop water status. In this study, thermal imagery was taken from maize under various levels of deficit irrigation treatments in different crop growing stages. The Expectation-Maximizatio...

  11. Remote Sensing of Canopy Leaf Area Index in Non-Forested Wetlands

    Science.gov (United States)

    Dronova, I.; Byrd, K. B.; Gong, P.

    2014-12-01

    Canopy leaf area index (LAI; one-sided leaf area per unit ground area) is a key instrumental variable used in models of plant-atmosphere carbon and water exchange, greenhouse gas and energy budgets and canopy-based habitats. Multiple studies have measured LAI in upland terrestrial landscapes and explored methods to up-scale field values to regional extents using remote sensing. However, in wetland ecosystems globally, much uncertainty still exists on magnitude of LAI, its spatial and temporal variation and on robust approaches to measure this index in the field and from remote sensing. We assessed LAI in different wetlands of the Sacramento-San Joaquin Delta, California, USA (the Delta) in growing seasons of 2013-2014 and tested its empirical relationships with spectral indices of vegetation function derived from Landsat satellite images. Peak-season site-average LAI ranged from 3.3m2m-2 in a diked marsh to 6.5m2m-2 in a young engineered wetland. Results also indicate high within-site dispersion of LAI (coefficient of variation from 0.13 in rice paddy to >0.5 in tall-canopy reed-dominated marshes) attributed to complex surface composition, variable canopy height and non-uniform contribution of litter. Optically measured field LAI significantly correlated (p<0.001) with several Landsat-based indicators of vegetation greenness; however, the strongest univariate relationships explained only 45-50% of LAI variance due to variable canopy characteristics and sub-pixel wetland complexity. Goodness of fit in these relationships improved following corrections based on subpixel spectral unmixing of the green cover fraction. Results indicate that single site-level "mean" LAI values may not sufficiently characterize complex Delta wetland canopies, and models of wetland ecosystem function and greenhouse gas fluxes should incorporate within-site spatial variation in canopy properties. Landsat satellite imagery is promising for regional-scale modeling of LAI, however, simple

  12. The Spatio-temporal Statistical Structure and Ergodic Behaviour of Scalar Turbulence Within a Rod Canopy

    Science.gov (United States)

    Ghannam, Khaled; Poggi, Davide; Porporato, Amilcare; Katul, Gabriel G.

    2015-12-01

    Connections between the spatial and temporal statistics of turbulent flow, and their possible convergence to ensemble statistics as assumed by the ergodic hypothesis, are explored for passive scalars within a rod canopy. While complete ergodicity is not expected to apply over all the spatial domain within such heterogeneous flows, the fact that canopy turbulence exhibits self-similar characteristics at a given depth within the canopy encourages a discussion on necessary conditions for an `operational' ergodicity framework. Flows between roughness elements such as within canopies exhibit features that distinguish them from their well-studied classical boundary-layer counterparts. These differences are commonly attributed to short-circuiting of the energy cascade and the prevalence of intermittent von Kármán vortex streets in the deeper layers of the canopy. Using laser-induced fluorescence measurements at two different depths within a rod canopy situated in a large flume, the spatio-temporal statistical properties and concomitant necessary conditions for ergodicity of passive scalar turbulence statistics are evaluated. First, the integral time and length scales are analyzed and their corresponding maximum values are used to guide the construction of an ensemble of independent realizations from repeated spatio-temporal concentration measurements. As a statistical analysis for an operational ergodicity check, a Kolmogorov-Smirnov test on the distributions of temporal and spatial concentration series against the ensemble was conducted. The outcome of this test reveals that ergodicity is reasonably valid over the entire domain except close to the rod elements where wake-induced inhomogeneities and damped turbulence prevail. The spatial concentration statistics within a grid-cell (square domain formed by four corner rods) appear to be less ergodic than their temporal counterparts, which is not surprising given the periodicity and persistence of von Kármán vortices in

  13. Exchange of Proton and Major Elements in Two-Layer Canopies Under Acid Rain in a Subtropical Evergreen Forest in Central-South China

    Institute of Scientific and Technical Information of China (English)

    Gong Zhang; Guang-Ming Zeng; Yi-Min Jiang; Chun-Yan Du; Guo-He Huang; Mei Zeng; Xiao-Kang Su; Ren-Jun Xiang

    2006-01-01

    Canopy exchanges of H+ and N (NH4+-N, NO3--N) and other major ions were evaluated and quantified in twolayer canopies based on throughfall measurements in Shaoshan Forest during the period 2000-2002, central-south China. The collected annual rainfall, throughfall, and sub-throughfall were 1 401, 1 191, and 1 084 mm/year, respectively. Fifteen percent and 8% of rainfall (or 9% of throughfall) were intercepted by the top canopy and sub-canopy layers, respectively. The foliar leaching of base cations from the top canopy was significantly higher than that from the sub-canopy, and the latter accounted for 25% of the former. The uptake of H+ and NH4+ was significantly higher in the top canopy than in the sub-canopy, indicating that the canopy buffering capacity in the top canopy was stronger than the sub-canopy;Mg2+ can be absorbed from water flux on the sub-canopy foliar surfaces to compensate for the Mg deficit in the forest soil during the growing season.

  14. Soil properties in forest gaps and under canopy in broad-leaved Pinus koraiensis forests in Changbai Mountainous Region, China

    Institute of Scientific and Technical Information of China (English)

    ZHANG Chunyu; ZHAO Xiuhai

    2007-01-01

    The species composition and diversities,and soil properties under canopy gaps in broad-leaved Pinus koraiensis forests were studied in the Changbai Mountains.The results indicated that the species composition and diversifies in gap were different from those under canopy.The Shannon-Wiener index,evenness index,and abundance index in gap were higher than those under canopy in the seedling layer,while the community dominance in the seedling layer increased in closed canopy.The physicochemical properties of soil changed with the change of space and resource availability in gaps.The thickness,standing crop,and water holding capacity of the litter layer under canopy were significantly (p < 0.01) higher than those in gap.The content of total nitrogen and total potassium of litter in gap were 10.47% and 20.73% higher than those under canopy,however,the content of total phosphorus and organic carbon under canopy were 15.23% and 12.66% more than those under canopy.The water content of 0-10 cm and 10-20 cm of soil layer in gap were 17.65% and 16.17% more than those under canopy.The soil buck density of 0-10 cm were slightly higher under canopy than that in gaps,but there was no significant difference in the soil buck density of the 10-20 cm soil layer.The soil pH values were 5.80 and 5.85 in gap and under canopy,respectively,and were not significantly different.The content of soil organic matter,total nitrogen,and total potassium in gap were 12.85%,7.67%,and 2.38% higher than those under canopy.The content of NH4+-N,available phosphorus,available potassium,and total phosphorus in soil under canopy were 13.33%,20.04%,16.52%,and 4.30% higher than those in gap.

  15. Canopy conductance decrease in Florida as a result of anthropogenic CO2 increase

    Science.gov (United States)

    Lammertsma, E.; Wagner-Cremer, F.

    2009-04-01

    Precipitation is one of the main factors controlling vegetation cover, but in turn vegetation has a considerable effect on regional climate by modifying the atmospheric energy and water budget. In Florida approximately 20% of the annual precipitation originates from local evapotranspiration. Transpiration is in large parts controlled by the stomatal conductance of the vegetation. Stomatal conductance of trees in turn is influenced by the atmospheric CO2 concentration ([CO2]), which has increased by 100ppmv since the industrial revolution. The potential consequences of the anthropogenic [CO2] increase on stomatal conductance, however, are not well quantified yet, which hampers parameterization of this variable in models. In this study we assess the change in transpiration rates in Florida by calculating the canopy conductance over the [CO2] increase of the past century. Past and present stomatal conductance levels are calculated from stomatal density and dimensions measured on modern leaves and historical herbarium specimen for the in Florida most common canopy taxa. These values are consequently upscaled to canopy level by calculating the relative abundance of the taxa in the various vegetation units providing an indication of the general change in canopy conductance in each unit. A significant negative correlation of stomatal conductance and [CO2] over the past century is found in various Florida tree taxa leading to a decrease of up to 40% in canopy conductance for major forest types. For Florida, where extreme land-use changes and urbanization significantly alter the hydrological system, the vegetation adaptation to increasing [CO2] levels may amplify the disturbance of the water budget. Our results may help to improve model attempts to quantify the past, present and future hydrological conditions by providing more accurate assessments on the biosphere-atmosphere feedback. The description of the undisturbed, pre-industrial state will also provide more realistic

  16. Can we use photography to estimate radiation interception by a crop canopy?

    Science.gov (United States)

    Chakwizira, E; Meenken, E D; George, M J; Fletcher, A L

    2015-03-01

    Accuracy of determining radiation interception, and hence radiation use efficiency, depends on the method of measuring photosynthetically active radiation intercepted. Methods vary, from expensive instruments such as Sunfleck ceptometers to simple methods such as digital photography. However, before universal use of digital photography there is need to determine its reliability and compare it with conventional, but expensive, methods. In a series of experiments at Lincoln, New Zealand, canopy development for barley, wheat, white clover and four forage brassica species was determined using both digital photographs and Sunfleck ceptometer. Values obtained were used to calculate conversion coefficient (Kf/Ki) ratios between the two methods. Digital photographs were taken at 45° and 90° for barley, wheat and white clover and at only 90° for brassicas. There was an interaction of effects of crop and cultivar for the cereal crops. Barley closed canopies earlier than wheat, and 'Emir' barley and 'Stettler' wheat had consistently higher canopy cover than 'Golden Promise' and 'HY459', respectively. Canopy cover was consistently larger at 45° than 90° for cereals. However, for white clover, the angle of digital photography was not important. There was also an interaction between effects of species and method of determining canopy cover for brassicas. Photographs gave higher cover values than ceptometer for forage rape and turnip, but the relationship was variable for forage kale and swede. Kf/Ki ratios of 1.0-1.10 for cereals, white clover and forage rape and turnip show that digital photographs can be used to estimated radiation interception, in place of Sunfleck ceptometer, for these crops.

  17. Simultaneous improvement in water use, productivity and albedo through canopy structural modification

    Science.gov (United States)

    Drewry, Darren; Kumar, Praveen; Long, Stephen

    2015-04-01

    Agricultural lands provide a tremendous opportunity to address challenges at the intersection of food and water security and climate change. Global demand for the major grain and seed crops is beginning to outstrip production, while population growth and the expansion of the global middle class have motivated calls for a doubling of food production by the middle of this century. This is occurring as yield gains for the major food crops have stagnated. At current rates of yield improvement this doubling will not be achieved. Plants have evolved to maximize the capture of radiation in the upper leaves, resulting in sub-optimal monoculture crop fields for maximizing productivity and other biogeophysical services. Using the world's most important protein crop, soybean, as an example, we show that by applying numerical optimization to a micrometeorological crop canopy model that significant, simultaneous gains in water use, productivity and reflectivity are possible with no increased demand on resources. Here we apply the MLCan multi-layer canopy biophysical model, which vertically resolves the radiation and micro-environmental variations that stimulate biochemical and ecophysiological functions that govern canopy-atmosphere exchange processes. At each canopy level photosynthesis, stomatal conductance, and energy balance are solved simultaneously for shaded and sunlit foliage. A multi-layer sub-surface model incorporates water availability as a function of root biomass distribution. MLCan runs at sub-hourly temporal resolution, allowing it to capture variability in CO2, water and energy exchange as a function of environmental variability. By modifying total canopy leaf area, its vertical distribution, leaf angle, and shortwave radiation reflectivity, all traits available in most major crop germplasm collections, we show that increases in either productivity (7%), water use (13%) or albedo (34%) could be achieved with no detriment to the other objectives, under climate

  18. Water-borne hyphomycetes in tree canopies of Kaiga (Western Ghats, India

    Directory of Open Access Journals (Sweden)

    Naga M. Sudheep

    2013-12-01

    Full Text Available The canopy samples such as trapped leaf litter, trapped sediment (during summer, stemflow and throughfall (during monsoon from five common riparian tree species (Artocarpus heterophyllus, Cassia fistula, Ficus recemosa, Syzygium caryophyllatum and Xylia xylocarpa in Kaiga forest stand of the Western Ghats of southwest India were evaluated for the occurrence of water-borne hyphomycetes. Partially decomposed trapped leaf litter was incubated in bubble chambers followed by filtration to assess conidial output. Sediments accumulated in tree holes or junction of branches were shaken with sterile leaf disks in distilled water followed by incubation of leaf disks in bubble chamber and filtration to find out colonized fungi. Stemflow and throughfall samples were filtered directly to collect free conidia. From five canopy niches, a total of 29 water-borne hyphomycetes were recovered. The species richness was higher in stemflow and throughfall than trapped leaf litter and sediments (14-16 vs. 6-10 species. Although sediments of Syzygium caryophyllatum were acidic (5.1, the conidial output was higher than other tree species. Stemflow and throughfall of Xylea xylocarpa even though alkaline (8.5-8.7 showed higher species richness (6-12 species as well as conidial load than rest of the tree species. Flagellospora curvula and Triscelophorus acuminatus were common in trapped leaf litter and sediments respectively, while conidia of Anguillospora crassa and A. longissima were frequent in stemflow and throughfall. Diversity of water-borne hyphomycetes was highest in throughfall of Xylea xylocarpa followed by throughfall of Ficus recemosa. Our study reconfirms the occurrence and survival of diverse water-borne hyphomycetes in different niches of riparian tree canopies of the Western Ghats during wet and dry regimes and predicts their possible role in canopy as saprophytes, endophytes and alternation of life cycle between canopy and aquatic habitats.

  19. EFFECTS OF ELEVATED ATMOSPHERIC CO{sub 2} ON CANOPY TRANSPIRATION IN SENESCENT SPRING WHEAT

    Energy Technology Data Exchange (ETDEWEB)

    GROSSMAN,S.; KIMBALL,B.A.; HUNSAKER,D.J.; LONG,S.P.; GARCIA,R.L.; KARTSCHALL,TH.; WALL,G.W.; PINTER,P.J,JR.; WECHSUNG,F.; LAMORTE,R.L.

    1998-12-31

    The seasonal course of canopy transpiration and the diurnal courses of latent heat flux of a spring wheat crop were simulated for atmospheric CO{sub 2} concentrations of 370 {micro}mol mol{sup {minus}1} and 550 {micro}mol mol{sup {minus}1}. The hourly weather data, soil parameters and the irrigation and fertilizer treatments of the Free-Air Carbon Dioxide Enrichment wheat experiment in Arizona (1992/93) were used to drive the model. The simulation results were tested against field measurements with special emphasis on the period between anthesis and maturity. A model integrating leaf photosynthesis and stomatal conductance was scaled to a canopy level in order to be used in the wheat growth model. The simulated intercellular CO{sub 2} concentration, C{sub i} was determined from the ratio of C{sub i} to the CO{sub 2} concentration at the leaf surface, C{sub s} the leaf to air specific humidity deficit and a possibly unfulfilled transpiration demand. After anthesis, the measured assimilation rates of the flag leaves decreased more rapidly than their stomatal conductances, leading to a rise in the C{sub i}/C{sub s} ratio. In order to describe this observation, an empirical model approach was developed which took into account the leaf nitrogen content for the calculation of the C{sub i}/C{sub s} ratio. Simulation results obtained with the new model version were in good agreement with the measurements. If changes in the C{sub i}/C{sub s} ratio accorded to the decrease in leaf nitrogen content during leaf senescence were not considered in the model, simulations revealed an underestimation of the daily canopy transpiration of up to 20% and a decrease in simulated seasonal canopy transpiration by 10%. The measured reduction in the seasonal sum of canopy transpiration and soil evaporation owing to CO{sub 2} enrichment, in comparison, was only about 5%.

  20. Effect of smoke and clouds on the transmissivity of photosynthetically active radiation inside the canopy

    Directory of Open Access Journals (Sweden)

    M. A. Yamasoe

    2006-01-01

    Full Text Available Biomass burning activities emit high concentrations of aerosol particles to the atmosphere. Such particles can interact with solar radiation, decreasing the amount of light reaching the surface and increasing the fraction of diffuse radiation through scattering processes, and thus has implications for photosynthesis within plant canopies. This work reports results from photosynthetically active radiation (PAR and aerosol optical depth (AOD measurements conducted simultaneously at Reserva Biológica do Jaru (Rondonia State, Brazil during LBA/SMOCC (Large-Scale Biosphere-Atmosphere Experiment in Amazonia/ Smoke, Aerosols, Clouds, Rainfall, and Climate and RaCCI (Radiation, Cloud, and Climate Interactions in the Amazon during the Dry-to-Wet Transition Season field experiments from 15 September to 15 November 2002. AOD values were retrieved from an AERONET (Aerosol Robotic Network radiometer, MODIS (Moderate Resolution Spectroradiometer and a portable sunphotometer from the United States Department of Agriculture – Forest Service. Significant reduction of PAR irradiance at the top of the canopy was observed due to the smoke aerosol particles layer. This radiation reduction affected turbulent fluxes of sensible and latent heats. The increase of AOD also enhanced the transmission of PAR inside the canopy. As a consequence, the availability of diffuse radiation was enhanced due to light scattering by the aerosol particles. A complex relationship was identified between light availability inside the canopy and net ecosystem exchange (NEE. The results showed that the increase of aerosol optical depth corresponded to an increase of CO2 uptake by the vegetation. However, for even higher AOD values, the corresponding NEE was lower than for intermediate values. As expected, water vapor pressure deficit (VPD, retrieved at 28m height inside the canopy, can also affect photosynthesis. A decrease in NEE was observed as VPD increased. Further studies are needed

  1. Curating and Preserving the Big Canopy Database System: an Active Curation Approach using SEAD

    Science.gov (United States)

    Myers, J.; Cushing, J. B.; Lynn, P.; Weiner, N.; Ovchinnikova, A.; Nadkarni, N.; McIntosh, A.

    2015-12-01

    Modern research is increasingly dependent upon highly heterogeneous data and on the associated cyberinfrastructure developed to organize, analyze, and visualize that data. However, due to the complexity and custom nature of such combined data-software systems, it can be very challenging to curate and preserve them for the long term at reasonable cost and in a way that retains their scientific value. In this presentation, we describe how this challenge was met in preserving the Big Canopy Database (CanopyDB) system using an agile approach and leveraging the Sustainable Environment - Actionable Data (SEAD) DataNet project's hosted data services. The CanopyDB system was developed over more than a decade at Evergreen State College to address the needs of forest canopy researchers. It is an early yet sophisticated exemplar of the type of system that has become common in biological research and science in general, including multiple relational databases for different experiments, a custom database generation tool used to create them, an image repository, and desktop and web tools to access, analyze, and visualize this data. SEAD provides secure project spaces with a semantic content abstraction (typed content with arbitrary RDF metadata statements and relationships to other content), combined with a standards-based curation and publication pipeline resulting in packaged research objects with Digital Object Identifiers. Using SEAD, our cross-project team was able to incrementally ingest CanopyDB components (images, datasets, software source code, documentation, executables, and virtualized services) and to iteratively define and extend the metadata and relationships needed to document them. We believe that both the process, and the richness of the resultant standards-based (OAI-ORE) preservation object, hold lessons for the development of best-practice solutions for preserving scientific data in association with the tools and services needed to derive value from it.

  2. Transpiration and canopy conductance variations of shelterbelt in an arid inland river basin of northwest China

    Science.gov (United States)

    Gao, G.

    2015-12-01

    The knowledge of plant water use characteristics under changing environmental conditions is essential for ecosystem management and water resources distribution in water-stressed environments. This study was conducted to quantify variations in transpiration and canopy conductance in a shelterbelt in the middle of the Heihe River Basin, China. Sap flow of eight Gansu Poplar trees (Populus gansuensis) with different diameters at breast height (DBH) was measured over three consecutive growing seasons (2012-2014). The evapotranspiration of groundwater via plant use was estimated by the White method, with diurnal water table fluctuations. Results showed that mean sap flow density varied between 30.62 ±11.44 and 101.88 ±28.98 kg m-2 h-1, and it increased linearly with the DBH. Variations of sap flow density were mainly controlled by meteorological factors in addition to water table depth. Average stand transpiration during the growing season was about 4.85 mm day-1, and it had a logarithmic relationship with reference crop evapotranspiration. Precipitation increased stand transpiration, but not at a statistically significant level (p>0.05). The recharge of soil water by irrigation significantly accelerated stand transpiration (p<0.05). Stand transpiration and canopy conductance increased by 27% and 31%, respectively, when soil water conditions changed from dry to wet. Canopy conductance decreased logarithmically with vapor pressure deficit, whereas there was no apparent relationship between canopy conductance and solar radiation. The sensitivity of canopy conductance to vapor pressure deficit decreased under dry soil conditions. Groundwater evapotranspiration (0.6-7.1 mm day-1) was linearly correlated with stand transpiration (1.1-6.5 mm day-1) (R2 = 0.71). During the drought period, approximately 80% of total stand transpiration came from groundwater evapotranspiration. This study highlighted the critical role of irrigation and groundwater for shelterbelts, and might

  3. Voxel-Based Spatial Filtering Method for Canopy Height Retrieval from Airborne Single-Photon Lidar

    Directory of Open Access Journals (Sweden)

    Hao Tang

    2016-09-01

    Full Text Available Airborne single-photon lidar (SPL is a new technology that holds considerable potential for forest structure and carbon monitoring at large spatial scales because it acquires 3D measurements of vegetation faster and more efficiently than conventional lidar instruments. However, SPL instruments use green wavelength (532 nm lasers, which are sensitive to background solar noise, and therefore SPL point clouds require more elaborate noise filtering than other lidar instruments to determine canopy heights, particularly in daytime acquisitions. Histogram-based aggregation is a commonly used approach for removing noise from photon counting lidar data, but it reduces the resolution of the dataset. Here we present an alternate voxel-based spatial filtering method that filters noise points efficiently while largely preserving the spatial integrity of SPL data. We develop and test our algorithms on an experimental SPL dataset acquired over Garrett County in Maryland, USA. We then compare canopy attributes retrieved using our new algorithm with those obtained from the conventional histogram binning approach. Our results show that canopy heights derived using the new algorithm have a strong agreement with field-measured heights (r2 = 0.69, bias = 0.42 m, RMSE = 4.85 m and discrete return lidar heights (r2 = 0.94, bias = 1.07 m, RMSE = 2.42 m. Results are consistently better than height accuracies from the histogram method (field data: r2 = 0.59, bias = 0.00 m, RMSE = 6.25 m; DRL: r2 = 0.78, bias = −0.06 m and RMSE = 4.88 m. Furthermore, we find that the spatial-filtering method retains fine-scale canopy structure detail and has lower errors over steep slopes. We therefore believe that automated spatial filtering algorithms such as the one presented here can support large-scale, canopy structure mapping from airborne SPL data.

  4. Shifts in southern Wisconsin forest canopy and understory richness, composition, and heterogeneity.

    Science.gov (United States)

    Rogers, David A; Rooney, Thomas P; Olson, Daniel; Waller, Donald M

    2008-09-01

    We resurveyed the under- and overstory species composition of 94 upland forest stands in southern Wisconsin in 2002-2004 to assess shifts in canopy and understory richness, composition, and heterogeneity relative to the original surveys in 1949-1950. The canopy has shifted from mostly oaks (Quercus spp.) toward more mesic and shade-tolerant trees (primarily Acer spp.). Oak-dominated early-successional stands and those on coarse, nutrient-poor soils changed the most in canopy composition. Understories at most sites (80%) lost native species, with mean species density declining 25% at the 1-m2 scale and 23.1% at the 20-m2 scale. Woody species have increased 15% relative to herbaceous species in the understory despite declining in absolute abundance. Initial canopy composition, particularly the abundance of red oaks (Quercus rubra and Q. velutina), predicted understory changes better than the changes observed in the overstory. Overall rates of native species loss were greater in later-successional stands, a pattern driven by differential immigration rather than differential extirpation. However, understory species initially found in early-successional habitats declined the most, particularly remnant savanna taxa with narrow or thick leaves. These losses have yet to be offset by compensating increases in native shade-adapted species. Exotic species have proliferated in prevalence (from 13 to 76 stands) and relative abundance (from 1.2% to 8.4%), but these increases appear unrelated to the declines in native species richness and heterogeneity observed. Although canopy succession has clearly influenced shifts in understory composition and diversity, the magnitude of native species declines and failure to recruit more shade-adapted species suggest that other factors now act to limit the richness, heterogeneity, and composition of these communities. PMID:18831170

  5. Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis.

    Science.gov (United States)

    Toomey, Michael; Friedl, Mark A; Frolking, Steve; Hufkens, Koen; Klosterman, Stephen; Sonnentag, Oliver; Baldocchi, Dennis D; Bernacchi, Carl J; Biraud, Sebastien C; Bohrer, Gil; Brzostek, Edward; Burns, Sean P; Coursolle, Carole; Hollinger, David Y; Margolis, Hank A; Mccaughey, Harry; Monson, Russell K; Munger, J William; Pallardy, Stephen; Phillips, Richard P; Torn, Margaret S; Wharton, Sonia; Zeri, Marcelo; And, Andrew D; Richardson, Andrew D

    2015-01-01

    The proliferation of digital cameras co-located with eddy covariance instrumentation provides new opportunities to better understand the relationship between canopy phenology and the seasonality of canopy photosynthesis. In this paper we analyze the abilities and limitations of canopy color metrics measured by digital repeat photography to track seasonal canopy development and photosynthesis, determine phenological transition dates, and estimate intra-annual and interannual variability in canopy photosynthesis. We used 59 site-years of camera imagery and net ecosystem exchange measurements from 17 towers spanning three plant functional types (deciduous broadleaf forest, evergreen needleleaf forest, and grassland/crops) to derive color indices and estimate gross primary productivity (GPP). GPP was strongly correlated with greenness derived from camera imagery in all three plant functional types. Specifically, the beginning of the photosynthetic period in deciduous broadleaf forest and grassland/crops and the end of the photosynthetic period in grassland/crops were both correlated with changes in greenness; changes in redness were correlated with the end of the photosynthetic period in deciduous broadleaf forest. However, it was not possible to accurately identify the beginning or ending of the photosynthetic period using camera greenness in evergreen needleleaf forest. At deciduous broadleaf sites, anomalies in integrated greenness and total GPP were significantly correlated up to 60 days after the mean onset date for the start of spring. More generally, results from this work demonstrate that digital repeat photography can be used to quantify both the duration of the photosynthetically active period as well as total GPP in deciduous broadleaf forest and grassland/crops, but that new and different approaches are required before comparable results can be achieved in evergreen needleleaf forest. PMID:26255360

  6. Mapping Urban Tree Canopy Cover Using Fused Airborne LIDAR and Satellite Imagery Data

    Science.gov (United States)

    Parmehr, Ebadat G.; Amati, Marco; Fraser, Clive S.

    2016-06-01

    Urban green spaces, particularly urban trees, play a key role in enhancing the liveability of cities. The availability of accurate and up-to-date maps of tree canopy cover is important for sustainable development of urban green spaces. LiDAR point clouds are widely used for the mapping of buildings and trees, and several LiDAR point cloud classification techniques have been proposed for automatic mapping. However, the effectiveness of point cloud classification techniques for automated tree extraction from LiDAR data can be impacted to the point of failure by the complexity of tree canopy shapes in urban areas. Multispectral imagery, which provides complementary information to LiDAR data, can improve point cloud classification quality. This paper proposes a reliable method for the extraction of tree canopy cover from fused LiDAR point cloud and multispectral satellite imagery data. The proposed method initially associates each LiDAR point with spectral information from the co-registered satellite imagery data. It calculates the normalised difference vegetation index (NDVI) value for each LiDAR point and corrects tree points which have been misclassified as buildings. Then, region growing of tree points, taking the NDVI value into account, is applied. Finally, the LiDAR points classified as tree points are utilised to generate a canopy cover map. The performance of the proposed tree canopy cover mapping method is experimentally evaluated on a data set of airborne LiDAR and WorldView 2 imagery covering a suburb in Melbourne, Australia.

  7. The effect of canopy closure on chimpanzee nest abundance in Lagoas de Cufada National Park, Guinea-Bissau.

    Science.gov (United States)

    Sousa, Joana; Casanova, Catarina; Barata, André V; Sousa, Cláudia

    2014-04-01

    The present study aimed to gather baseline information about chimpanzee nesting and density in Lagoas de Cufada Natural Park (LCNP), in Guinea-Bissau. Old and narrow trails were followed to estimate chimpanzee density through marked-nest counts and to test the effect of canopy closure (woodland savannah, forest with a sparse canopy, and forest with a dense canopy) on nest distribution. Chimpanzee abundance was estimated at 0.79 nest builders/km(2), the lowest among the areas of Guinea-Bissau with currently studied chimpanzee populations. Our data suggest that sub-humid forest with a dense canopy accounts for significantly higher chimpanzee nest abundance (1.50 nests/km of trail) than sub-humid forest with a sparse canopy (0.49 nests/km of trail) or woodland savannah (0.30 nests/km of trail). Dense-canopy forests play an important role in chimpanzee nesting in the patchy and highly humanized landscape of LCNP. The tree species most frequently used for nesting are Dialium guineense (46 %) and Elaeis guineensis (28 %). E. guineensis contain nests built higher in the canopy, while D. guineense contain nests built at lower heights. Nests observed during baseline sampling and replications suggest seasonal variations in the tree species used for nest building. PMID:24408762

  8. [Estimating forest canopy cover by combining spaceborne ICESat-GLAS waveforms and mul- tispectral Landsat-TM images].

    Science.gov (United States)

    2015-06-01

    The spatial distribution of forest canopy cover is a critical indicator for evaluating the forest productivity and decomposition rates. With the Wangqing Forest Region in Jilin Province of China as the study area, this study first estimated the forest canopy cover using spaceborne LiDAR IC- ESat-GLAS waveforms and Landsat-TM multispectral images, respectively, and then GLAS data and TM images were combined to further estimate forest canopy cover by using multiple linear regression and BP neural network. The results showed that when the forest canopy cover was estimated with single data source, the determination coefficient of model was 0.762 for GLAS data and 0.598 for TM data. When the forest canopy cover was estimated by combining GLAS data and TM data, the determination coefficient of model was 0.841 for multiple linear regression, and the simulation precision was 0.851 for BP neural network. The study indicated that the combination of ICESat-GLAS data and Landsat-TM images could exploit the advantages of multi-source remote sensing data and improve the estimating accuracy of forest canopy cover, and it was expected to provide a promising way for spatially continuous mapping of forest canopy cover in future.

  9. A simple and complete two-interface model for spatially developing flow in rigid and flexible canopies

    Science.gov (United States)

    Sadri, Samaneh; Luzzatto-Fegiz, Paolo

    2015-11-01

    At the front of a canopy, flow deceleration is associated with strong vertical fluxes of mass and momentum. Accurately describing this region is important in many applications, including terrestrial and aquatic vegetation, as well as large wind farms. Simple models can provide a framework to analyze these flows, thereby guiding and complementing more refined and computationally intensive tools. Jerram et al. (2003) introduced a linearised model that describes the flow field through sparse canopies, albeit at the cost of solving a PDE. A simpler approach involves vertically integrating the governing equations across the canopy, yielding scalings that relate key variables (e.g. Chen & Nepf 2013), which in turn can be used to construct empirical fits. We build a simple and complete model, by separating the flow in three horizontal layers. These comprise the canopy, the overlying boundary layer, and the outer flow, such that exchanges of mass and momentum occur at two interfaces. We parameterize turbulent exchanges by means of the entrainment hypothesis; this is a closure that has been used extensively in other problems in geophysical fluid dynamics. We neglect pressure gradients inside the canopy, but account for upstream pressure variations and retain nonlinear terms. Our two-interface model quantitatively describes the flow velocities and boundary layer heights in developing canopy flows, and successfully accounts for the effect of ambient stratification. Finally, we discuss developments accounting for the effects of flexibility in vegetation canopies.

  10. Influence of canopy traits on spatio-temporal variability of throughfall in Mediterranean Downy oak and Scots pine stands

    Science.gov (United States)

    Llorens, Pilar; Garcia-Estringana, Pablo; Latron, Jérôme; Molina, Antonio J.; Gallart, Francesc

    2014-05-01

    The spatio-temporal variability of throughfall is the result of the interaction of biotic factors, related to the canopy traits, and abiotic factors, linked to the meteorological conditions. This variability may lead to significant differences in the volume of water and solutes that reach the ground in each location, and beyond in the hydrological and biogeochemical dynamics of forest soils. Two forest stands in Mediterranean climatic conditions were studied to analyse the role of biotic and abiotic factors in the temporal and spatial redistribution of throughfall. The monitored stands are a Downy oak forest (Quercus pubescens) and a Scots pine forest (Pinus sylvestris), both located in the Vallcebre research catchments (NE Spain, 42º 12'N, 1º 49'E). The study plots are representative of Mediterranean mountain areas with spontaneous afforestation by Scots pine as a consequence of the abandonment of agricultural terraces, formerly covered by Downy oaks. The monitoring design of each plot consisted of a set of 20 automatic rain recorders and 40 automatic soil moisture probes located below the canopy. 100 hemispheric photographs of the canopy were used to place the instruments at representative locations (in terms of canopy cover) within the plot. Bulk rainfall, stemflow and meteorological conditions above the forest cover were also automatically recorded. Canopy cover as well as biometric characteristics of the plots were also regularly measured. The results indicate a temporal persistence of throughfall in both stands, as observed elsewhere. However, for the oak plot the seasonal evolution of canopy traits added additional variability, with higher variability in summer and different locations of wet and dry spots depending on the season. Furthermore, this work investigates the influence of canopy structure on the spatial variability of throughfall by analysing a large set of forest parameters, from main canopy traits to detailed leaves and wood characteristics

  11. TLS monitoring of snowpack distribution in a mountain forested areas: Analysis of canopy disturbance on snow evolution.

    Science.gov (United States)

    Revuelto, Jesús; López-Moreno, Juan Ignacio; Azorin-Molina, Cesar; Alonso, Esteban; San Miguel, Alba

    2016-04-01

    Forested mountain areas at high elevations show important interaction with snowpack distribution and its evolution in time, and thus in many cases are the limit of the cryosphere in mountain zones. Such interactions have significant consequences in the hydrologic response of mountain rivers. Thereby observing the evolution of snowpack in forested areas has a big importance form a basic science perspective and also for water management. This work presents a detailed comparison of small scale effect of forest characteristics on snowpack distribution in Central Pyrenees, before and after a strong modification of canopies features. The snowpack distribution has been obtained using a novel remote sensing technology (Terrestrial Laser Scanner, TLS), with high spatial resolution (0.25m) over a 1000m2 study area for 27 survey dates along three snow seasons. Between the second and the third snow season a strong canopy pruning was performed in the study site, and thereby the snowpack evolution with both canopy configurations was compared. A Principal Component Analysis has been applied to analyze the snowpack distributions observed during the study period. Results obtained have shown that despite large differences in Canopy radius (1.2 m) and Canopy height (2.5m), not a different snowpack evolution was observed. For both Canopy configurations the variable with higher importance on snowpack distribution is the snow depth amount. The change in forest structure has important implications in the decrease of Canopy areas and the increase of Open areas (proportionally to Canopy change), but not a different interaction with forest structure was observed. The canopy pruning realized in the study site is typically accomplished for fire risk reduction and this shows the consequences that such action has in snowpack distribution and that hereby these may have in water management possibly delaying peak runoff.

  12. [Microbial community and its activities in canopy- and understory humus of two montane forest types in Ailao Mountains, Northwest China].

    Science.gov (United States)

    Liu, Yong-jie; Liu, Wen-yao; Chen, Lin; Zhang, Han-bo; Wang, Gao-sheng

    2010-09-01

    Mid-montane moist evergreen broadleaved forest (MMF) and top-montane dwarf mossy forest (DMF) are the two major natural forest types in subtropical mountainous area of Ailao Mountains, Northwest China. In this paper, a comparative study was made on the microbial composition, quantity, biochemical activity, metabolic activity, and their seasonal dynamics in the canopy- and understory humus of the two forest types. The composition, quantity, and metabolic activity of the microbes in the canopy humus of dominant tree species in MMF and DMF were also analyzed. In the canopy humus of the two forest types, the amounts of fungi and actinomycetes, microbial biomass C and N, and intensities of nitrogen fixation and cellulose decomposition were significantly higher than those in understory humus. Meanwhile, the amount of cellulose-decomposing microbes (ACDM), cellulose decomposition intensity, microbial biomass C and N, and metabolic activity in the canopy humus of MMF were significantly higher than those of DMF. The amounts of bacteria, fungi, and aerobic nitrogen-fixing bacteria (ANFB) and the metabolic activity in the canopy humus of MMF and DMF were significantly higher in wet season than in dry season, while a contradictory trend was observed on the amount of actinomycetes. No significant difference was observed on the amount of ACDM between wet season and dry season. For the two forest types, the amounts of microbes and their biochemical activities in canopy humus had a larger seasonal variation range than those in understory humus. There was a significant difference in the amounts of the microbes in canopy humus among the dominant tree species in MMF and DMF, especially in wet season. The microbes in canopy humus played important roles in maintaining the biodiversity of epiphytes in the canopy, and in supplying the needed nutrients for the vigorous growth of the epiphytes.

  13. Ground-Based Lidar Measurements of Forest Canopy Structure as Predictors of Net Primary Production Across Successional Time

    Science.gov (United States)

    Scheuermann, C. M.; Gough, C. M.; Nave, L. E.

    2015-12-01

    Forest canopy structure is a key predictor of gas exchange processes that control carbon (C) uptake, including the allocation of photosynthetically fixed C to new plant biomass growth, or net primary production (NPP). Prior work suggests forest canopy structural complexity (CSC), the arrangement of leaves within a volume of canopy, changes as forests develop and is a strong predictor of NPP. However, the expressions of CSC that best predict NPP over decadal to century timescales is unknown. Our objectives were to use multiple remote sensing observations to characterize forest canopy structure in increasing dimensional complexity over a forest age gradient, and to identify which expressions of physical structure best served as proxies of NPP. The study at the University of Michigan Biological Station in Pellston, MI, USA uses two parallel forest chronosequences with different harvesting and fire disturbance histories and includes three old-growth ecosystems varying in canopy composition. We have derived several expressions of 2-D and 3-D forest canopy structure from hemispherical images, a ground-based portable canopy lidar (PCL), and a 3-D terrestrial lidar scanner (TLS), and are relating these structural metrics with NPP and light and nitrogen allocation within the canopy. Preliminary analysis shows that old-growth stands converged on a common mean CSC, but with substantially higher within-stand variation in complexity as deciduous tree species increased in forest canopy dominance. Forest stands that were more intensely disturbed were slower to recover leaf area index (LAI) as they regrew, but 2-D measures of CSC increased similarly as forests aged, regardless of disturbance history. Ongoing work will relate long-term trends in forest CSC with NPP and resource allocation to determine which forest structure remote sensing products are most useful for modeling and scaling C cycling processes through different stages of forest development.

  14. A parameterization of momentum roughness length and displacement height for a wide range of canopy densities

    Directory of Open Access Journals (Sweden)

    A. Verhoef

    1997-01-01

    Full Text Available Values of the momentum roughness length, z0, and displacement height, d, derived from wind profiles and momentum flux measurements, are selected from the literature for a variety of sparse canopies. These include savannah, tiger-bush and several row crops. A quality assessment of these data, conducted using criteria such as available fetch, height of wind speed measurement and homogeneity of the experimental site, reduced the initial total of fourteen sites to eight. These datapoints, combined with values carried forward from earlier studies on the parameterization of z0 and d, led to a maximum number of 16 and 24 datapoints available for d and z0, respectively. The data are compared with estimates of roughness length and displacement height as predicted from a detailed drag partition model, R92 (Raupach, 1992, and a simplified version of this model, R94 (Raupach, 1994. A key parameter in these models is the roughness density or frontal area index, λ. Both the comprehensive and the simplified model give accurate predictions of measured z0 and d values, but the optimal model coefficients are significantly different from the ones originally proposed in R92 and R94. The original model coefficients are based predominantly on measured aerodynamic parameters of relatively closed canopies and they were fitted `by eye'. In this paper, best-fit coefficients are found from a least squares minimization using the z0 and d values of selected good-quality data for sparse canopies and for the added, mainly closed canopies. According to a statistical analysis, based on the coefficient of determination (r2, the number of observations and the number of fitted model coefficients, the simplified model, R94, is deemed to be the most appropriate for future z0 and d predictions. A CR value of 0.35 and a cd1 value of about 20 are found to be appropriate for a large range of canopies varying in density from closed to very sparse. In this case, 99% of the total variance

  15. Usability of multiangular imaging spectroscopy data for analysis of vegetation canopy shadow fraction in boreal forest

    Science.gov (United States)

    Markiet, Vincent; Perheentupa, Viljami; Mõttus, Matti; Hernández-Clemente, Rocío

    2016-04-01

    Imaging spectroscopy is a remote sensing technology which records continuous spectral data at a very high (better than 10 nm) resolution. Such spectral images can be used to monitor, for example, the photosynthetic activity of vegetation. Photosynthetic activity is dependent on varying light conditions and varies within the canopy. To measure this variation we need very high spatial resolution data with resolution better than the dominating canopy element size (e.g., tree crown in a forest canopy). This is useful, e.g., for detecting photosynthetic downregulation and thus plant stress. Canopy illumination conditions are often quantified using the shadow fraction: the fraction of visible foliage which is not sunlit. Shadow fraction is known to depend on view angle (e.g., hot spot images have very low shadow fraction). Hence, multiple observation angles potentially increase the range of shadow fraction in the imagery in high spatial resolution imaging spectroscopy data. To investigate the potential of multi-angle imaging spectroscopy in investigating canopy processes which vary with shadow fraction, we obtained a unique multiangular airborne imaging spectroscopy data for the Hyytiälä forest research station located in Finland (61° 50'N, 24° 17'E) in July 2015. The main tree species are Norway spruce (Picea abies L. karst), Scots pine (Pinus sylvestris L.) and birch (Betula pubescens Ehrh., Betula pendula Roth). We used an airborne hyperspectral sensor AISA Eagle II (Specim - Spectral Imaging Ltd., Finland) mounted on a tilting platform. The tilting platform allowed us to measure at nadir and approximately 35 degrees off-nadir. The hyperspectral sensor has a 37.5 degrees field of view (FOV), 0.6m pixel size, 128 spectral bands with an average spectral bandwidth of 4.6nm and is sensitive in the 400-1000 nm spectral region. The airborne data was radiometrically, atmospherically and geometrically processed using the Parge and Atcor software (Re Se applications Schl

  16. 3-D Modeling of Tomato Canopies Using a High-Resolution Portable Scanning Lidar for Extracting Structural Information

    OpenAIRE

    Fumiki Hosoi; Kazushige Nakabayashi; Kenji Omasa

    2011-01-01

    In the present study, an attempt was made to produce a precise 3D image of a tomato canopy using a portable high-resolution scanning lidar. The tomato canopy was scanned by the lidar from three positions surrounding it. Through the scanning, the point cloud data of the canopy were obtained and they were co-registered. Then, points corresponding to leaves were extracted and converted into polygon images. From the polygon images, leaf areas were accurately estimated with a mean absolute percent...

  17. Decoupling Contributions from Canopy Structure and Leaf Optics is Critical for Remote Sensing Leaf Biochemistry (Reply to Townsend, et al.)

    Science.gov (United States)

    Knyazikhin, Yuri; Lewis, Philip; Disney, Mathias I.; Stenberg, Pauline; Mottus, Matti; Rautianinen, Miina; Kaufmann, Robert K.; Marshak, Alexander; Schull, Mitchell A.; Carmona, Pedro Latorre; Vanderbilt, Vern; Davis, Anthony B.; Baret, Frederic; Jacquemoud, Stephane; Lyapustin, Alexei; Yang, Yan; Myneni, Ranga B.

    2013-01-01

    Townsend et al. (1) agree that we explained that the apparent relationship (2) between foliar nitrogen (%N) and near-infrared (NIR) canopy reflectance was largely attributable to structure (which is in turn caused by variation in fraction of broadleaf canopy). Our conclusion that the observed correlation with %N was spurious (i.e., lacking a causal basis) is, thus, clearly justified: we demonstrated that structure explained the great majority of observed correlation, where the structural influence was derived precisely via reconciling the observed correlation with radiative-transfer theory. What this also suggests is that such correlations, although observed, do not uniquely provide information on canopy biochemical constituents.

  18. A velocity-dissipation stochastic trajectory model for dispersal of heavy particles inside canopies

    Science.gov (United States)

    Duman, T.; Trakhtenbrot, A.; Poggi, D.; Cassiani, M.; Katul, G. G.

    2014-12-01

    While the importance of dispersal of windborne heavy particles such as seeds or pollen inside canopies is rarely disputed, the details needed to describe turbulent fluctuations in such applications continue to draw significant research attention. Turbulence and heavy-particle dispersal within canopies are sensitive to interactions between meteorological conditions and canopy structure as well as on particle shape and mass. In many applications, dispersal of heavy particles is required over a broad range of time scales ranging from hours to several decades thereby frustrating any attempt to resolve all aspects of turbulence. In recent years, Lagrangian stochastic trajectory models have been favored for predicting seed dispersal and are viewed as an acceptable compromise between empirical models with their ad-hoc parameterizations and computationally intensive Large Eddy Simulations. Here, an important feature of turbulence, namely the intermittency in dissipation rate, is incorporated into such trajectory models. Adding this effect has been recently shown to alter scalar dispersion patterns, especially in the far field. This method is applied here to heavy particles, where the long distance dispersal is deemed significant for many applications. This modeling approach was first evaluated using controlled laboratory experiments, where uniform-sized spheres were released within a canopy comprised of uniform cylinders inside a flume (see figure). The extended model that includes intermittency effects, as well as inertial drag forces on the particles, was shown to provide superior fit with the measured dispersal kernel than simpler models that add a constant settling velocity for each particle and/or do not include intermittency. The extended model results captured short distance dispersal and the heavy tails. Next the extended model was evaluated against a field experiment, where plant seeds were manually released inside a hardwood forest canopy (see figure). This

  19. [A novel vegetation index (MPRI) of corn canopy by vehicle-borne dynamic prediction].

    Science.gov (United States)

    Li, Shu-qiang; Li, Min-zan; Sun, Hong

    2014-06-01

    Ground-based remote sensing system is a significant way to understand the growth of corn and provide accurate and scientific data for precision agriculture. The vehicle-borne system is one of the most important tools for corn canopy monitoring. However, the vehicle-borne growth monitoring system cannot maintain steady operations due to the row spacing of corn. The reflectance of corn canopy, which was used to construct the model for the chlorophyll content, was disturbed by the reflectance of soil background. The background interference with the reflectance could not be removed effectively, which would result in a deviation in the growth monitoring. In order to overcome this problem, a novel vegetation index named MPRI was developed in the present paper. The tests were carried out by the vehicle-borne system on the cornfield. The sensors which configured the vehicle-borne system had 4 bands, being respectively 550, 650, 766 and 850 nm. It would obtain the spectral data while the vehicle moved along the row direction. The sampling rate was about 1 point per second. The GPS receiver obtained the location information at the same rate. MPRI was made up by the reflectance ratio of 660 and 550 nm. It was very effective to analyze the information about the reflectance of the canopy. The results of experiments showed that the MPRI of soil was the positive value and the MPRI of canopy was the negative value. So it is easier to distinguish the spectral information about soil and corn canopy by MPRI. The results indicated that: it had satisfactory forecasting accuracy for the chlorophyll content by using the MPRI on the moving monitoring. The R2 of the prediction model was about 0.72. The R2 Of the model of NDVI, which was used to represent the chlorophyll content, was only 0.24. It indicates that MPRI had good measurement results for the dynamic measurement process. It provided the novel measurement way to get the canopy reflectance spectra and the better vegetation index to

  20. Azimuth angle distribution of thermal-infrared temperature over rice canopy with row orientation

    International Nuclear Information System (INIS)

    Using ground-based and airborne observation, as well as numerical simulation, we confirmed that the thermal-infrared temperature (TIT) of a rice canopy surface with row orientation changes with azimuth viewing angle. The TIT of the direction parallel to row orientation is 1-4degC higher than that of the other directions. The TIT differences occur during the daytime, and for a leaf area index (LAI) around 0.5-3 because the field of view of an infrared thermometer viewing a direction parallel to the rows contains much more of the water surface under the rice canopy than the plant surface of the canopy. The temperature of the water surface between rows is much higher than that of the plant surface, because the intense incoming solar radiation near noon is not absorbed by the canopy and so warms the water efficiently. Matsushima and Kondo (1997) developed a radiation transfer model for TIT of a rice canopy surface, and confirmed a nadir viewing angle dependence of TIT of according to leaf area index. Based on the above model, a model of a rice canopy with row orientation was developed to investigate the TIT variation with azimuth viewing angle. The model design employs the ratio of the apparent areas of the plant surface and the underground water surface, which change with the azimuth and nadir viewing angles, and reproduces the observation well. These results indicate that the main cause of the TIT difference is the ratio of the apparent areas of the plant surface and the water surface when the temperature of the water surface is much higher than that of the plant surface. The TIT in a westerly direction exceeds that of the other directions shortly after sunrise because the solar elevation is low and the azimuth of the sun is around east. This is because the plant surface temperature exceeds that of the water surface, which is opposite the near noon cases. On the scale of a satellite grid, a simple numerical experiment demonstrated that the TIT difference of azimuth

  1. Simultaneous measurements of HONO below and above a spruce forest canopy

    Science.gov (United States)

    Sörgel, M.; Trebs, I.; Moravek, A.; Hens, K.; Zetzsch, C.

    2009-04-01

    Nitrous Acid (HONO) plays an important role in atmospheric chemistry because it is easily photolyzed and contributes to OH, the most important oxidizing agent in the atmosphere. Understanding sources and sinks of HONO (especially during daytime) leads to a better estimation of OH-budget. We have performed simultaneous HONO measurements in and above a tall spruce forest canopy using two long path absorption photometers (LOPAPs) at a field site located in the Fichtelgebirge mountains in northeastern Bavaria, Germany (50°09'N, 11°52'E, 775m above sea level). The LOPAP is a wet chemical instrument actively correcting for interferences (Kleffmann et al., 2002). Measurements were made simultaneously with the devices from 13-25 Sep 2007 on a tower (z = 24.25m, above canopy) and in the trunk space (z = 0.48m close to the forest floor). To determine the instrument precisions, both instruments were operated side-by-side in the trunk space at z = 1m, enabling the validation of observed mixing ratio differences in and above the canopy. At HONO levels ranging from 30 ppt to 220 ppt, the two LOPAP instruments agreed within 10% under dry conditions. Both instruments were operating without temperature control under field conditions including rainy, foggy and dry clear sky periods with large temperature variations (5 - 20 °C). Several other micrometeorological and chemical quantities were measured aiming to investigate the coupling between soil, canopy and atmospheric boundary layer. The measured HONO mixing ratios showed typical diel cycles with higher values during nighttime, especially during dry periods. During wet conditions, mixing ratios were significantly lower. Average mixing ratios measured with the LOPAP instruments ranged from 40 ppt to 80 ppt during the day and from 80 ppt to 150 ppt during the night with a higher variability during nighttime, but were found to be independent of NO2 mixing ratios. The average HONO/NO2 ratios are 0.03 both in and above canopy, which

  2. Potential performance characteristics of ICESat-2/ATLAS for canopy height retrievals in different ecosystems

    Science.gov (United States)

    Neuenschwander, A. L.; Pitts, K.

    2015-12-01

    With an expected launch in late 2017 (or early 2018), the ICESat-2 satellite will provide a global distribution of geodetic measurements of both the terrain surface and relative canopy heights which will provide a significant benefit to society through a variety of applications including forest structural mapping and improved global digital terrain models. The Advanced Topographic Laser Altimeter System (ATLAS) instrument on ICESat-2 will utilize a photon counting lidar which utilizes low power laser pulse with detectors sensitive at the single photon level. Due to this type of detector, any returned photon whether from the reflected signal or solar background can trigger a detection event. The ATLAS instrument will record the arrival time associated with a single photon detection that can occur anywhere within the vertical distribution of the reflected signal, that is, anywhere within the vertical distribution of the canopy. One of the uncertainties facing the ecosystem community is a comprehensive understanding of the performance of ICESat-2 will be for various ecosystems. Specifically, which ecosystems -and to a greater extent- what amount of canopy cover will create constraints on the ability to derive relative canopy height from ICESat-2 measurements. This paper aims to provide the science and user community of the ICESat-2 land/vegetation data products with a realistic understanding of the performance characteristics and subsequent data quality and the associated errors. To simulate ICESat-2/ATLAS data, data from small-footprint waveform lidar are the best surrogate for empirically deriving simulated ICESat-2 data as the entire temporal profile of the laser energy is recorded on each waveform. As such, a normalized waveform is the probability of where a photon is returned from the reflecting surface along the laser line-of-sight. Using this empirical approach, simulated ICESat-2 data can be developed for a variety of ecosystems ranging from sparse shrublands

  3. Vertical structure and diurnal variability of ammonia exchange potential within an intensively managed grass canopy

    Science.gov (United States)

    Herrmann, B.; Mattsson, M.; Jones, S. K.; Cellier, P.; Milford, C.; Sutton, M. A.; Schjoerring, J. K.; Neftel, A.

    2009-01-01

    Stomatal ammonia compensation points (χs) of grass species on a mixed fertilized grassland were determined by measurements of apoplastic [NH4+] and [H>+] in the field. Calculated χs values were compared with in-canopy atmospheric NH3 concentration (χa) measurements. Leaf apoplastic [NH4+] increased by a factor of two from the lowest level in the canopy to the top level. Bulk leaf [NH4+] and especially [NO3-] slightly increased at the bottom of the canopy and these concentrations were very high in senescent plant litter. Calculated χs values were below atmospheric χs at all canopy levels measured, indicating that the grassland was characterized by NH3 deposition before cutting. This was confirmed by the χa profile, showing the lowest χa close to the ground (15 cm above soil surface) and an increase in χa with canopy height. Neither χs nor χa could be measured close to the soil surface, however, the [NH4+] in the litter material indicated a high potential for NH3 emission. A diurnal course in apoplastic [NH4+] was seen in the regrowing grass growing after cutting, with highest concentration around noon. Both apoplastic and tissue [NH4+] increased in young grass compared to tall grass. Following cutting, in-canopy gradients of atmospheric χa showed NH3 emission but since calculated χs values of the cut grass were still lower than atmospheric NH3 concentrations, the emissions could not entirely be explained by stomatal NH3 loss. High tissue [NH4+] in the senescent plant material indicated that this fraction constituted an NH3 source. After fertilization, [NH4+] increased both in apoplast and leaf tissue with the most pronounced increase in the former compared to the latter. The diurnal pattern in apoplastic [NH4+] was even more pronounced after fertilization and calculated χs values were generally higher, but remained below atmospheric [NH3].

  4. Does sun-induced Chlorophyll fluorescence well capture canopy photosynthesis in a rice paddy?

    Science.gov (United States)

    Kimm, H.; Ryu, Y.; Kang, M.; Kim, J.

    2015-12-01

    Sun-induced chlorophyll fluorescence (SiF) has emerged as a convincing indicator of carbon assimilation rates under diverse environmental conditions. Here, we present a continuous observation system of SiF at a sporadically irrigated rice paddy site in South Korea. Our site also includes automatic observation systems for eddy covariance, water table depth, and spectral sensors which are composed of LED sensors, and RGB- and NIR cameras. Additionally, we conducted manual observations of photosynthetic parameters (Li-6400), leaf area index (LAI-2200), NDVI and PRI (ASD FieldSpec) once per ten days on average. By analyzing manual- and automatic field observations, we quantify carbon budget of the site. Finally, we investigate how accurately SiF detects canopy photosynthesis, and discuss what factors mainly control canopy photosynthesis.

  5. Assessing the vegetation canopy influences on wind flow using wind tunnel experiments with artificial plants

    Indian Academy of Sciences (India)

    Youngjoo Hong; Dongyeob Kim; Sangjun Im

    2016-04-01

    Wind erosion causes serious problems and considerable threat in most regions of the world. Vegetation on the ground has an important role in controlling wind erosion by covering soil surface and absorbingwind momentum. A set of wind tunnel experiments was performed to quantitatively examine the effect of canopy structure on wind movement. Artificial plastic vegetations with different porosity and canopyshape were introduced as the model canopy. Normalized roughness length $(Z0/H)$ and shear velocity ratio $(R)$ were analyzed as a function of roughness density ($\\lambda$). Experiments showed that $Z0/H$ increasesand R decreases as λ reaches a maximum value, $\\lambda_{max}$, while the values of $Z0/H$ and $R$ showed little change with $\\lambda$ value beyond as $\\lambda_{max}$.

  6. 基于Canopy的高效K-means算法%Canopy for efficient K-Means

    Institute of Scientific and Technical Information of China (English)

    邱荣太

    2012-01-01

    In this paper, we develop a applicable parallel programming method which based on Map-reduce . A improved K-means algorithm based on Canopy is presented according to it's sensitiveity to the initial centers. Our experimental results show basically linear speedup with an increasing number of processors .%基于Map-reduce的并行编程方法,针对大规模集群多处理器多集群的聚类算法K-means的应用。提出了基于Canopy的改进K-means优化算法。实验结果证明,多核Canopy-K-means聚类算法的运行效率和准确度与处理器核数成线性比例。

  7. Satellite air temperature estimation for monitoring the canopy layer heat island of Milan

    DEFF Research Database (Denmark)

    Pichierri, Manuele; Bonafoni, Stefania; Biondi, Riccardo

    2012-01-01

    In this work, satellite maps of the urban heat island of Milan are produced using satellite-based infrared sensor data. For this aim, we developed suitable algorithms employing satellite brightness temperatures for the direct air temperature estimation 2 m above the surface (canopy layer), showing...... 2007 and 2010 were processed. Analysis of the canopy layer heat island (CLHI) maps during summer months reveals an average heat island effect of 3–4K during nighttime (with some peaks around 5K) and a weak CLHI intensity during daytime. In addition, the satellite maps reveal a well defined island shape...... across the city center from June to September confirming that, in Milan, urban heating is not an occasional phenomenon. Furthermore, this study shows the utility of space missions to monitor the metropolis heat islands if they are able to provide nighttime observations when CLHI peaks are generally...

  8. Hurricane Effects on Mangrove Canopies Observed from MODIS and SPOT Imagery

    CERN Document Server

    Parenti, Michael

    2014-01-01

    The effects of four hurricanes on protected mangroves in southwest Florida (Katrina and Wilma) and the Yucatan Peninsula (Emily and Dean) were assessed using paired sets of 20m multispectral SPOT and 16-day 500m MODIS images. The normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) were used to assess possible damage to and recovery of mangrove canopies associated with each storm event. The results revealed decreases in the NDVI and EVI of mangrove canopies consistent with storm effects, although the effects in South Florida and Sian Ka'an were highly variable. Hurricane Wilma produced a large decrease in NDVI and EVI although values recovered within a year, suggesting resilience to this storm. Rainfall associated with Hurricane Emily apparently increased mangrove photosynthetic activity owing to the location of landfall outside the study area, the small size of the wind field and the apparent lack of storm surge. MODIS NDVI time series revealed pronounced seasonality in mangrove ...

  9. Growth of soybean at future tropospheric ozone concentrations decreases canopy evapotranspiration and soil water depletion.

    Science.gov (United States)

    Bernacchi, Carl J; Leakey, Andrew D B; Kimball, Bruce A; Ort, Donald R

    2011-06-01

    Tropospheric ozone is increasing in many agricultural regions resulting in decreased stomatal conductance and overall biomass of sensitive crop species. These physiological effects of ozone forecast changes in evapotranspiration and thus in the terrestrial hydrological cycle, particularly in intercontinental interiors. Soybean plots were fumigated with ozone to achieve concentrations above ambient levels over five growing seasons in open-air field conditions. Mean season increases in ozone concentrations ([O₃]) varied between growing seasons from 22 to 37% above background concentrations. The objective of this experiment was to examine the effects of future [O₃] on crop ecosystem energy fluxes and water use. Elevated [O₃] caused decreases in canopy evapotranspiration resulting in decreased water use by as much as 15% in high ozone years and decreased soil water removal. In addition, ozone treatment resulted in increased sensible heat flux in all years indicative of day-time increase in canopy temperature of up to 0.7 °C. PMID:21477906

  10. Processes of ammonia air–surface exchange in a fertilized Zea mays canopy

    Directory of Open Access Journals (Sweden)

    E. Nemitz

    2013-02-01

    Full Text Available Recent incorporation of coupled soil biogeochemical and bi-directional NH3 air–surface exchange algorithms into regional air quality models holds promise for further reducing uncertainty in estimates of NH3 emissions from fertilized soils. While this represents a significant advancement over previous approaches, the evaluation and improvement of such modeling systems for fertilized crops requires process-level field measurements over extended periods of time that capture the range of soil, vegetation, and atmospheric conditions that drive short-term (i.e., post-fertilization and total growing season NH3 fluxes. This study examines the processes of NH3 air–surface exchange in a fertilized corn (Zea mays canopy over the majority of a growing season to characterize soil emissions after fertilization and investigate soil–canopy interactions. Micrometeorological flux measurements above the canopy, measurements of soil, leaf apoplast and dew/guttation chemistry, and a combination of in-canopy measurements, inverse source/sink, and resistance modeling were employed. Over a period of approximately 10 weeks following fertilization, daily mean and median net canopy-scale fluxes yielded cumulative total N losses of 8.4% and 6.1%, respectively, of the 134 kg N ha−1 surface applied to the soil as urea ammonium nitrate (UAN. During the first month after fertilization, daily mean emission fluxes were positively correlated with soil temperature and soil volumetric water. Diurnally, maximum hourly average fluxes of ≈ 700 ng N m−2 s−1 occurred near mid-day, coincident with the daily maximum in friction velocity. Net emission was still observed 5 to 10 weeks after fertilization, although mid-day peak fluxes had declined to ≈ 125 ng N m−2 s−1. A key finding of the surface chemistry measurements was the observation of high pH (7.0–8.5 in leaf dew/guttation, which reduced the ability of the canopy to recapture soil emissions during wet periods

  11. Marsh canopy leaf area and orientation calculated for improved marsh structure mapping

    Science.gov (United States)

    Ramsey III, Elijah W.; Rangoonwala, Amina; Jones, Cathleen E.; Bannister, Terri

    2015-01-01

    An approach is presented for producing the spatiotemporal estimation of leaf area index (LAI) of a highly heterogeneous coastal marsh without reliance on user estimates of marsh leaf-stem orientation. The canopy LAI profile derivation used three years of field measured photosynthetically active radiation (PAR) vertical profiles at seven S. alterniflora marsh sites and iterative transform of those PAR attenuation profiles to best-fit light extinction coefficients (KM). KM sun zenith dependency was removed obtaining the leaf angle distribution (LAD) representing the average marsh orientation and the LAD used to calculate the LAI canopy profile. LAI and LAD reproduced measured PAR profiles with 99% accuracy and corresponded to field documented structures. LAI and LAD better reflect marsh structure and results substantiate the need to account for marsh orientation. The structure indexes are directly amenable to remote sensing spatiotemporal mapping and offer a more meaningful representation of wetland systems promoting biophysical function understanding.

  12. Concepts and analyses in the CT scanning of root systems and leaf canopies: A timely summary

    Directory of Open Access Journals (Sweden)

    Jonathan A Lafond

    2015-12-01

    Full Text Available Non-medical applications of computed tomography (CT scanning have flourished in recent years, including in Plant Science. This Perspective article on CT scanning of root systems and leaf canopies is intended to be of interest to three categories of readers: those who have not yet tried plant CT scanning, and should find inspiration for new research objectives; readers who are on the learning curve with applications – here is helpful advice for them; and researchers with greater experience – the field is evolving quickly and it is easy to miss aspects. Our conclusion is that CT scanning of roots and canopies is highly demanding in terms of technology, multidisciplinarity and big-data analysis, to name a few areas of expertise, but eventually, the reward for researchers is directly proportional!

  13. Processes of ammonia air-surface exchange in a fertilized Zea mays canopy

    Directory of Open Access Journals (Sweden)

    E. Nemitz

    2012-06-01

    Full Text Available Recent incorporation of coupled soil biogeochemical and bi-directional NH3 air-surface exchange algorithms into regional air quality models holds promise for further reducing uncertainty in estimates of NH3 emissions from fertilized soils. While this represents a significant advancement over previous approaches, the evaluation and improvement of such modeling systems for fertilized crops requires process level field measurements over extended periods of time that capture the range of soil, vegetation, and atmospheric conditions that drive short term (i.e., post fertilization and total growing seasonNH3 fluxes. This study examines the processes of NH3 air-surface exchange in a fertilized corn (Zea mays canopy over the majority of a growing season to characterize soil emissions after fertilization and investigate soil-canopy interactions. Micrometeorological flux measurements above the canopy, measurements of soil, leaf apoplast and dew/guttation chemistry, and a combination of in-canopy measurements, inverse source/sink, and resistance modeling were employed. Over a period of approximately 10 weeks following fertilization, daily mean and median net canopy-scale fluxes yielded cumulative total N losses of 8.4% and 6.1%, respectively, of the 134 kg N ha−1 surface applied to the soil as urea ammonium nitrate (UAN. During the first month after fertilization, daily mean emission fluxes were positively correlated with soil temperature and soil volumetric water. Diurnally, maximum hourly average fluxes of ≈700 ng N m−2 s−1 occurred near mid-day, coincident with the daily maximum in friction velocity. Net emission was still observed 5 to 10 weeks after fertilization, although mid-day peak fluxes had declined to ≈125 ng N m−2 s−1 A key finding of the surface chemistry measurements was the observation of high pH (7.0 – 8.5 in leaf dew/guttation, which reduced the ability of the canopy to recapture soil emissions during wet periods. In-canopy

  14. Five-year measurements of ozone fluxes to a Danish Norway spruce canopy

    DEFF Research Database (Denmark)

    Mikkelsen, Teis Nørgaard; Ro-Poulsen, H.; Hovmand, M.F.;

    2004-01-01

    Ozone concentrations and fluxes have been measured continuously during 5 years (1996-2000) by the gradient method in a Norway spruce dominated forest stand in West Jutland, Denmark, planted in 1965. The method has been validated against other methodologies and a relatively good relationship...... was found. The data are analysed to quantify diurnal, seasonal and yearly fluxes, and non-stomatal and stomatal removal are estimated. Monthly means of climatic data are shown, and day and night values of the aerodynamic resistance, r(a), viscous sub-layer resistance, r(b), and the surface or canopy...... resistance, r(c), are presented. The yearly ozone deposition is approximately 126 kg ha(-1). The canopy ozone uptake is highest during the day and during the summer. This is interpreted as increased stomatal uptake and physical and chemical reactions. The daily means of ozone concentration and fluxes...

  15. Estimation of chlorophyll contents in leaves and canopy of steppe vegetation using hyperspectral measurements

    Science.gov (United States)

    Wei, Dandan; Xiao, Chenchao; Zhang, Zhenhua; Wei, Hongyan; Shang, Kun

    2016-04-01

    As an important part of the Eurasian Steppe, the temperate typical steppe in Inner Mongolia is highly representative of the Eurasian vegetation. Compared to multispectral remote sensing, hyperspectral remote sensing is more sensitive in monitoring some characteristics of vegetation. However, the research on the typical temperate steppe in Inner Mongolia is still not perfect, so we selected three sampling zones with different dominant species on the typical steppe in Xilinhot of Inner Mongolia. We collected spectrum of leaves and canopy separately to estimate content of chlorophyll of steppe vegetation. In addition, we compared and analyzed the advantage and feasibility of different estimation methods in estimating chlorophyll contents of meadows which have different dominant species through cross validation. The conclusions drawn in this research are as follows: Due to significant discontinuity, maximum first derivative method and Lagrange interpolation method are not suitable for estimation of chlorophyll of typical steppe. Compared with other methods, the red edge position calculated with four points linear interpolation obviously migrates to long wave direction. Inverted Gaussian model and four points linear interpolation both show low sensitivity for Stipa grandis steppe zone (with Stipa grandis as dominant species) where chlorophyll concentration is low and there is saturation phenomenon and weak stability (obvious variation of R2) for Leymus chinensis steppe (with Leymus chinensis as dominant species) where chlorophyll concentration is high, so they are also not the best choice. Linear extrapolation and polynomial fitting show certain saturation for high concentration of chlorophyll and also high correlation coefficient for both leaves and canopy, so they are suitable for estimation of chlorophyll concentration of leaves and canopy on the steppe. The different methods of extracting red edge are better at estimating chlorophyll of leaves than canopy and the

  16. On the behaviour of a stressed cotton canopy in a direct air stream

    Science.gov (United States)

    Schutt, J. B.; Newcomb, W. W.

    1986-01-01

    Reflectance variations of a stressed cotton canopy were conducted in the presence of a fan-generated air stream to investigate the effects of air movement and the resulting temperature changes on remotely-sensed data. The initial drop in reflectance after application of the air stream was found to be greatest in the morning because leaf turgor was at a maximum, enabling leaves on the windward side of the canopy to assume surprisingly stable vertical positions. By afternoon, a reduction in leaf turgor was responsible for less stem displacement and consequently a reduction in light-trapping capability. However, reflectance oscillations were greater because the leaves had become sufficiently limp to flutter at the edges and about the petioles exposing both adaxial and abaxial surfaces to the incident light.

  17. Simulating spatial and temporal variation of corn canopy temperature during an irrigation cycle

    Science.gov (United States)

    Choudhury, B. J.; Federer, C. A.

    1983-01-01

    The canopy air temperature difference (delta T) which provides an index for scheduling irrigation was examined. The Monteith transpiration equation was combined with both uptake from a single layered root zone and change in internal storage of the plant and the continuity equation for water flux in the soil plant atmosphere system was solved. The model indicates that both daily total transpiration and soil induced depression of plant water potential may be inferred from mid-day delta T. It is suggested that for the soil plant weather data used in the simulation, either a mid day spatial variability of about 0.8K in canopy temperatures or a field averaged delta T of 2 to 4K may be a suitable criterion for irrigation scheduling.

  18. An integrated model of soil-canopy spectral radiance observations, photosynthesis, fluorescence, temperature and energy balance

    Directory of Open Access Journals (Sweden)

    C. van der Tol

    2009-06-01

    Full Text Available This paper presents the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes, which is a vertical (1-D integrated radiative transfer and energy balance model. It calculates the radiation and the energy balance of a vegetated land surface at the level of single leaves as well as at canopy level, and the spectrum of the outgoing radiation in the viewing direction, at a high spectral resolution over the range from 0.4 to 50 μm, thus including the visible, near and shortwave infrared, as well as the thermal domain. A special routine is dedicated to the calculation of chlorophyll fluorescence. The calculation of radiative transfer and the energy balance is fully integrated, allowing for feedback between surface temperatures, leaf chlorophyll fluorescence and radiative fluxes. Model simulations were evaluated against observations reported in the literature. The model may serve as a theoretical ground truth to derive relationships between observed spectra and physical processes at the land surface.

  19. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 1, Northwest United States: CNPY01_1

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into...

  20. LINKING IN SITU TIME SERIES FOREST CANOPY LAI AND PHENOLOGY METRICS WITH MODIS AND LANDSAT NDVI AND LAI PRODUCTS

    Science.gov (United States)

    The subject of this presentation is forest vegetation dynamics as observed by the TERRA spacecraft's Moderate-Resolution Imaging Spectroradiometer (MODIS) and Landsat Thematic Mapper, and complimentary in situ time series measurements of forest canopy metrics related to Leaf Area...

  1. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 4, Southeast United States: CNPY01_4

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into...

  2. Correlation between absence of bone remodeling compartment canopies, reversal phase arrest, and deficient bone formation in post-menopausal osteoporosis

    DEFF Research Database (Denmark)

    Levin Andersen, Thomas; Hauge, Ellen M; Rolighed, Lars;

    2014-01-01

    Bone remodeling compartments (BRCs) were recently recognized to be present in patients with primary hyperparathyroidism and critical for bone reconstruction in multiple myeloma and endogenous Cushing's syndrome. The BRCs are outlined by a cellular canopy separating the bone remodeling events...

  3. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 2, Northeast United States: CNPY01_2

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into...

  4. National Land Cover Database 2001 (NLCD01) Tree Canopy Layer Tile 3, Southwest United States: CNPY01_3

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This 30-meter resolution data set represents the tree canopy layer for the conterminous United States for the 2001 time period. The data have been arranged into...

  5. Do soil fertilization and forest canopy foliage affect the growth and photosynthesis of Amazonian saplings?

    OpenAIRE

    Nilvanda dos Santos Magalhães; Ricardo Antonio Marenco; Miguel Angelo Branco Camargo

    2014-01-01

    Most Amazonian soils are highly weathered and poor in nutrients. Therefore, photosynthesis and plant growth should positively respond to the addition of mineral nutrients. Surprisingly, no study has been carried out in situ in the central Amazon to address this issue for juvenile trees. The objective of this study was to determine how photosynthetic rates and growth of tree saplings respond to the addition of mineral nutrients, to the variation in leaf area index of the forest canopy, and to ...

  6. Technological Advancement in Tower-Based Canopy Reflectance Monitoring: The AMSPEC-III System.

    Science.gov (United States)

    Tortini, Riccardo; Hilker, Thomas; Coops, Nicholas C; Nesic, Zoran

    2015-01-01

    Understanding plant photosynthesis, or Gross Primary Production (GPP), is a crucial aspect of quantifying the terrestrial carbon cycle. Remote sensing approaches, in particular multi-angular spectroscopy, have proven successful for studying relationships between canopy-reflectance and plant-physiology processes, thus providing a mechanism to scale up. However, many different instrumentation designs exist and few cross-comparisons have been undertaken. This paper discusses the design evolution of the Automated Multiangular SPectro-radiometer for Estimation of Canopy reflectance (AMSPEC) series of instruments. Specifically, we assess the performance of the PP-Systems Unispec-DC and Ocean Optics JAZ-COMBO spectro-radiometers installed on an updated, tower-based AMSPEC-III system. We demonstrate the interoperability of these spectro-radiometers, and the results obtained suggest that JAZ-COMBO can successfully be used to substitute more expensive measurement units for detecting and investigating photosynthesis and canopy spectra. We demonstrate close correlations between JAZ-COMBO and Unispec-DC measured canopy radiance (0.75 ≤ R² ≤ 0.85) and solar irradiance (0.95 ≤ R² ≤ 0.96) over a three month time span. We also demonstrate close agreement between the bi-directional distribution functions obtained from each instrument. We conclude that cost effective alternatives may allow a network of AMSPEC-III systems to simultaneously monitor various vegetation types in different ecosystems. This will allow to scale and improve our understanding of the interactions between vegetation physiology and spectral characteristics, calibrate broad-scale observations to stand-level measurements, and ultimately lead to improved understanding of changing vegetation spectral features from satellite.

  7. Canopy in the Clouds: Integrating Science and Media to Inspire a New Generation of Scientists

    Science.gov (United States)

    Goldsmith, G. R.; Fulton, A. D.; Witherill, C. D.

    2008-12-01

    Innovative approaches to science education are critical for inspiring a new generation of scientists. In a world where students are inundated with digital media inviting them to explore exciting, emerging disciplines, science often lags behind in using progressive media techniques. Additionally, science education media often neglects to include the scientists conducting research, thereby disconnecting students from the excitement, adventure, and beauty of conducting research in the field. Here we present initial work from a science education media project entitled Canopy in the Clouds. In particular, we address the goals and approach of the project, the logistics associated with generating educational material at a foreign field site, and the challenges associated with effectively integrating science and media. Canopy in the Clouds is designed to engage students in research, motivate a new generation of young scientists, and promote conservation from the perspective of a current research project being conducted in the canopy of a tropical montane cloud forest located in Monteverde, Costa Rica. The project seeks to generate curriculum based on multiple, immersive forms of novel digital media that attract and maintain student attention. By doing so from the perspective of an adventurous research project in a beautiful and highly biodiverse region, we hope to engage students in science and enhance bioliteracy. However, there are considerable logistic considerations associated with such an approach, including safety, travel, permitting, and equipment maintenance. Additionally, the goals of both the scientific research and the educational media project must be balanced in order to meet objectives in a timely fashion. Finally, materials generated in the field must be translated to viable final products and distributed. Work associated with Canopy in the Clouds will thus provide insight into this process and can serve to inform future science education and outreach

  8. The Structure and Equilibrium Conditions of a Generalized Economic Canopy: A Note

    OpenAIRE

    V.Heinrich S. Amavilah

    2005-01-01

    This note draws upon ecological models to describe the structure and equilibrium conditions of a generalized economic canopy consisting of three interactive economies assumed to be in competitive epiphytic, parasitic, and host relationships to each other. The maintained hypothesis is that generally (a) parasites are a drag on their hosts, (b) epiphytes interfere with normal functioning of both parasites and hosts, and (c) hosts must support their own performance as well as the survival of epi...

  9. The Inhibitory Effect of Rhododendron maximum L. (Ericaceae) Thickets on Mycorrhizal Colonization of Canopy Tree Seedlings

    OpenAIRE

    Walker, John F.

    1998-01-01

    THE INHIBITORY EFFECT OF RHODODENDRON MAXIMUM L. (ERICACEAE) THICKETS ON MYCORRHIZAL COLONIZATION OF CANOPY TREE SEEDLINGS John F. Walker (ABSTRACT) Thickets of Rhododendron maximum (Rm) in the southern Appalachians impose severe limitations on the regeneration of hardwood and coniferous seedlings. Interactions between Rm thickets and ectomycorrhizal colonization were examined to explain seedling inhibition. Experimental blocks were established in and out of Rm thickets in a mature,...

  10. Prediction of Canopy Heights over a Large Region Using Heterogeneous Lidar Datasets: Efficacy and Challenges

    Directory of Open Access Journals (Sweden)

    Ranjith Gopalakrishnan

    2015-08-01

    Full Text Available Generating accurate and unbiased wall-to-wall canopy height maps from airborne lidar data for large regions is useful to forest scientists and natural resource managers. However, mapping large areas often involves using lidar data from different projects, with varying acquisition parameters. In this work, we address the important question of whether one can accurately model canopy heights over large areas of the Southeastern US using a very heterogeneous dataset of small-footprint, discrete-return airborne lidar data (with 76 separate lidar projects. A unique aspect of this effort is the use of nationally uniform and extensive field data (~1800 forested plots from the Forest Inventory and Analysis (FIA program of the US Forest Service. Preliminary results are quite promising: Over all lidar projects, we observe a good correlation between the 85th percentile of lidar heights and field-measured height (r = 0.85. We construct a linear regression model to predict subplot-level dominant tree heights from distributional lidar metrics (R2 = 0.74, RMSE = 3.0 m, n = 1755. We also identify and quantify the importance of several factors (like heterogeneity of vegetation, point density, the predominance of hardwoods or softwoods, the average height of the forest stand, slope of the plot, and average scan angle of lidar acquisition that influence the efficacy of predicting canopy heights from lidar data. For example, a subset of plots (coefficient of variation of vegetation heights <0.2 significantly reduces the RMSE of our model from 3.0–2.4 m (~20% reduction. We conclude that when all these elements are factored into consideration, combining data from disparate lidar projects does not preclude robust estimation of canopy heights.

  11. A method for describing the canopy architecture of coppice poplar with allometric relationships.

    Science.gov (United States)

    Casella, Eric; Sinoquet, Hervé

    2003-12-01

    A multi-scale biometric methodology for describing the architecture of fast-growing short-rotation woody crops is used to describe 2-year-old poplar clones during the second rotation. To allow for expressions of genetic variability observed within this species (i.e., growth potential, leaf morphology, coppice and canopy structure), the method has been applied to two clones: Ghoy (Gho) (Populus deltoides Bartr. ex Marsh. x Populus nigra L.) and Trichobel (Tri) (Populus trichocarpa Torr. & A. Gray x Populus trichocarpa). The method operates at the stool level and describes the plant as a collection of components (shoots and branches) described as a collection of metameric elements, themselves defined as a collection of elementary units (internode, petiole, leaf blade). Branching and connection between the plant units (i.e., plant topology) and their spatial location, orientation, size and shape (i.e., plant geometry) describe the plant architecture. The methodology has been used to describe the plant architecture of 15 selected stools per clone over a 5-month period. On individual stools, shoots have been selected from three classes (small, medium and large) spanning the diameter distribution range. Using a multi-scale approach, empirical allometric relationships were used to parameterize elementary units of the plant, topological relationships and geometry (e.g., distribution of shoot diameters on stool, shoot attributes from shoot diameter). The empirical functions form the basis of the 3-D Coppice Poplar Canopy Architecture model (3-D CPCA), which recreates the architecture and canopy structure of fast-growing coppice crops at the plot scale. Model outputs are assessed through visual and quantitative comparisons between actual photographs of the coppice canopy and simulated images. Overall, results indicate a good predictive ability of the 3-D CPCA model.

  12. Development of a new 1D urban canopy model: coherences between surface parameterizations

    OpenAIRE

    BLOND, Nadège; Mauree, Dasaraden; Kohler, Manon; Clappier, Alain

    2015-01-01

    A 1-D Canopy Interface Model (CIM) was developed in order to better simulate the effect of urban obstacles on the atmosphere in the boundary layer. The model solves the Navier-Stokes equations on a high-resolved gridded vertical column. The effect of the surface is simulated testing a set of theories and urban parameterizations. The final proposition guarantees its coherence with past theories in any atmospheric stability and terrain configuration. Obstacle characteristics are computed using...

  13. Disease risk in temperate amphibian populations is higher at closed-canopy sites.

    Directory of Open Access Journals (Sweden)

    C Guilherme Becker

    Full Text Available Habitat loss and chytridiomycosis (a disease caused by the chytrid fungus Batrachochytrium dendrobatidis - Bd are major drivers of amphibian declines worldwide. Habitat loss regulates host-pathogen interactions by altering biotic and abiotic factors directly linked to both host and pathogen fitness. Therefore, studies investigating the links between natural vegetation and chytridiomycosis require integrative approaches to control for the multitude of possible interactions of biological and environmental variables in spatial epidemiology. In this study, we quantified Bd infection dynamics across a gradient of natural vegetation and microclimates, looking for causal associations between vegetation cover, multiple microclimatic variables, and pathogen prevalence and infection intensity. To minimize the effects of host diversity in our analyses, we sampled amphibian populations in the Adirondack Mountains of New York State, a region with relatively high single-host dominance. We sampled permanent ponds for anurans, focusing on populations of the habitat generalist frog Lithobates clamitans, and recorded various biotic and abiotic factors that potentially affect host-pathogen interactions: natural vegetation, canopy density, water temperature, and host population and community attributes. We screened for important explanatory variables of Bd infections and used path analyses to statistically test for the strength of cascading effects linking vegetation cover, microclimate, and Bd parameters. We found that canopy density, natural vegetation, and daily average water temperature were the best predictors of Bd. High canopy density resulted in lower water temperature, which in turn predicted higher Bd prevalence and infection intensity. Our results confirm that microclimatic shifts arising from changes in natural vegetation play an important role in Bd spatial epidemiology, with areas of closed canopy favoring Bd. Given increasing rates of anthropogenic

  14. Rainfall redistribution and change of water quality in tropical forest canopies : patterns and persistence

    OpenAIRE

    Zimmermann, Alexander

    2009-01-01

    Motivations and research objectives: During the passage of rain water through a forest canopy two main processes take place. First, water is redistributed; and second, its chemical properties change substantially. The rain water redistribution and the brief contact with plant surfaces results in a large variability of both throughfall and its chemical composition. Since throughfall and its chemistry influence a range of physical, chemical and biological processes at or below the forest floor ...

  15. An Automated Comparative Observation System for Sun-Induced Chlorophyll Fluorescence of Vegetation Canopies

    OpenAIRE

    Xijia Zhou; Zhigang Liu; Shan Xu; Weiwei Zhang; Jun Wu

    2016-01-01

    Detecting sun-induced chlorophyll fluorescence (SIF) offers a new approach for remote sensing photosynthesis. However, to analyse the response characteristics of SIF under different stress states, a long-term time-series comparative observation of vegetation under different stress states must be carried out at the canopy scale, such that the similarities and differences in SIF change law can be summarized under different time scales. A continuous comparative observation system for vegetation ...

  16. The Ergodic Structure of Passive Scalar Turbulence Statistics within Dense Canopies

    Science.gov (United States)

    Ghannam, K.; Poggi, D.; Porporato, A. M.; Katul, G. G.

    2014-12-01

    The ergodic hypothesis, implicitly used in virtually all atmospheric boundary layer studies, assumes that the time/space average of a measured flow variable converges to an ensemble of independent realizations from similar initial states and boundary conditions and for sufficiently long sampling times. Turbulent flows within roughness elements such as canopies differ from their classical boundary layer counterparts due to the short-circuiting of the energy cascade and the prevalence of von Karman vortex streets in the deeper layers of the canopy (see Figure). Despite recent experimental support for the validity of the ergodic hypothesis on turbulence statistics in the atmospheric surface layer, the impact of the aforementioned phenomena on the ergodicity of passive scalars within dense canopies remains unexplored. Using Laser Induced Florescence (LIF) measurements and flow visualization of scalar concentration within a rod canopy situated in a flume (see Figure), the necessary conditions for ergodicity of passive scalar turbulence statistics at two different depths were considered. The integral time and length scales were first analyzed and their corresponding maximum values were used to construct an ensemble of (weak) independent realizations. To within experimental limitation, a Kolmogorov-Smirnov test on the distributions of temporal and spatial concentration series against the ensembles revealed that the ergodic hypothesis was reasonable, except close to the rods where wake-induced inhomogeneity and damped turbulence prevail. The spatial concentration statistics within a repeated rod-cell configuration appeared less ergodic than their temporal counterpart given the periodicity and persistence of von Karman vortices on the flow field. Using lagged cross-correlations of scalar concentration time series at different spatial locations, the local advection velocity of dominant eddies was inferred. The computed probability density function of the longitudinal

  17. MAPPING URBAN TREE CANOPY COVER USING FUSED AIRBORNE LIDAR AND SATELLITE IMAGERY DATA

    OpenAIRE

    Parmehr, Ebadat G.; Amati, Marco; Fraser, Clive S.

    2016-01-01

    Urban green spaces, particularly urban trees, play a key role in enhancing the liveability of cities. The availability of accurate and up-to-date maps of tree canopy cover is important for sustainable development of urban green spaces. LiDAR point clouds are widely used for the mapping of buildings and trees, and several LiDAR point cloud classification techniques have been proposed for automatic mapping. However, the effectiveness of point cloud classification techniques for automated tree e...

  18. BACKSCATTERING OF INDIVIDUAL LIDAR PULSES FROM FOREST CANOPIES EXPLAINED BY PHOTOGRAMMETRICALLY DERIVED VEGETATION STRUCTURE

    OpenAIRE

    Korpela, I.; Hovi, A.; L. Korhonen

    2013-01-01

    In recent years, airborne LiDAR sensors have shown remarkable performance in the mapping of forest vegetation. This experimental study looks at LiDAR data at the scale of individual pulses to elucidate the sources behind interpulse variation in backscattering. Close-range photogrammetry was used for obtaining the canopy reference measurements at the ratio scale. The experiments illustrated different orientation techniques in the field, LiDAR acquisitions and photogrammetry in both le...

  19. The canopy interception–landslide initiation conundrum: insight from a tropical secondary forest in northern Thailand

    OpenAIRE

    SIDLE, Roy C.; Ziegler, Alan D.

    2016-01-01

    The interception and smoothing effect of forest canopies on pulses of incident rainfall and its delivery to the soil has been suggested as a factor in moderating peak pore water pressure development within soil mantles, thus reducing the risk of shallow landslides. Here we provide three years of rainfall and throughfall data in a tropical secondary dipterocarp forest characterized by few large trees in northern Thailand, along with selected soil moisture dynamics, to address this issue. Throu...

  20. Canopy gap dynamics of second-growth red spruce-northern hardwood stands in West Virginia

    Science.gov (United States)

    Rentch, J.S.; Schuler, T.M.; Nowacki, G.J.; Beane, N.R.; Ford, W.M.

    2010-01-01

    Forest restoration requires an understanding of the natural disturbance regime of the target community and estimates of the historic range of variability of ecosystem components (composition, structure, and disturbance processes). Management prescriptions that support specific restoration activities should be consistent with these parameters. In this study, we describe gap-phase dynamics of even-aged, second-growth red spruce-northern hardwood stands in West Virginia that have been significantly degraded following early Twentieth Century harvesting and wildfire. In the current stage of stand development, gaps tended to be small, with mean canopy gap and extended canopy gap sizes of 53.4m2 and 199.3m2, respectively, and a canopy turnover rate of 1.4%year-1. The majority of gaps resulted from the death of one or two trees. American beech snags were the most frequent gap maker, partially due to the elevated presence of beech-bark disease in the study area. Gaps ranged in age from 1 to 28 years, had a mean of 13 years, and were unimodal in distribution. We projected red spruce to be the eventual gap filler in approximately 40% of the gaps. However, we estimated that most average-sized gaps will close within 15-20 years before red spruce canopy ascension is projected (30-60 years). Accordingly, many understory red spruce will require more than one overhead release - an observation verified by the tree-ring record and consistent with red spruce life history characteristics. Based on our observations, silvicultural prescriptions that include overhead release treatments such as thinning from above or small gap creation through selection harvesting could be an appropriate activity to foster red spruce restoration in the central Appalachians. ?? 2010 Elsevier B.V.

  1. Plant physiological and environmental controls over the exchange of acetaldehyde between forest canopies and the atmosphere

    Directory of Open Access Journals (Sweden)

    K. Jardine

    2008-06-01

    Full Text Available We quantified fine scale sources and sinks of gas phase acetaldehyde in two forested ecosystems in the US. During the daytime, the upper canopy behaved as a net source while at lower heights, reduced emission rates or net uptake were observed. At night, uptake generally predominated thoughout the canopies. Net ecosystem emission rates were inversely related to foliar density which influenced the extinction of light and the acetaldehyde compensation point in the canopy. This is supported by branch level studies revealing much higher compensation points in the light than in the dark for poplar (Populus deltoides and holly oak (Quercus ilex implying a higher light/temperature sensitivity for acetaldehyde production relative to consumption. The view of stomata as the major pathway for acetaldehyde exchange is supported by strong linear correlations between branch transpiration rates and acetaldehyde exchange velocities for both species. In addition, natural abundance carbon isotope analysis of gas-phase acetaldehyde during poplar branch fumigation experiments revealed a significant kinetic isotope effect of 5.1±0.3‰, associated with the uptake of acetaldehyde. Similar experiments with dry dead poplar leaves showed no fractionation or uptake of acetaldehyde, confirming that this is only a property of living leaves. We suggest that acetaldehyde belongs to a potentially large list of plant metabolites where stomatal conductance can exert long term control over both emission and uptake rates due to the presence of both source(s and sink(s within the leaf which strongly buffer large changes in concentrations in the substomatal airspace due to changes in stomatal conductance. We conclude that the exchange of acetaldehyde between plant canopies and the atmosphere is fundamentally controlled by ambient acetaldehyde concentrations, stomatal conductance, and the acetaldehyde compensation point.

  2. Plant physiological and environmental controls over the exchange of acetaldehyde between forest canopies and the atmosphere

    Directory of Open Access Journals (Sweden)

    K. Jardine

    2008-11-01

    Full Text Available We quantified fine scale sources and sinks of gas phase acetaldehyde in two forested ecosystems in the US. During the daytime, the upper canopy behaved as a net source while at lower heights, reduced emission rates or net uptake were observed. At night, uptake generally predominated throughout the canopies. Net ecosystem emission rates were inversely related to foliar density due to the extinction of light in the canopy and a respective decrease of the acetaldehyde compensation point. This is supported by branch level studies revealing much higher compensation points in the light than in the dark for poplar (Populus deltoides and holly oak (Quercus ilex implying a higher light/temperature sensitivity for acetaldehyde production relative to consumption. The view of stomata as the major pathway for acetaldehyde exchange is supported by strong linear correlations between branch transpiration rates and acetaldehyde exchange velocities for both species. In addition, natural abundance carbon isotope analysis of gas-phase acetaldehyde during poplar branch fumigation experiments revealed a significant kinetic isotope effect of 5.1±0.3‰ associated with the uptake of acetaldehyde. Similar experiments with dry dead poplar leaves showed no fractionation or uptake of acetaldehyde, confirming that this is only a property of living leaves. We suggest that acetaldehyde belongs to a potentially large list of plant metabolites where stomatal resistance can exert long term control over both emission and uptake rates due to the presence of both source(s and sink(s within the leaf which strongly buffer large changes in concentrations in the substomatal airspace due to changes in stomatal resistance. We conclude that the exchange of acetaldehyde between plant canopies and the atmosphere is fundamentally controlled by ambient acetaldehyde concentrations, stomatal resistance, and the compensation point which is a function of light/temperature.

  3. Throughfall and its spatial variability beneath xerophytic shrub canopies within water-limited arid desert ecosystems

    Science.gov (United States)

    Zhang, Ya-feng; Wang, Xin-ping; Hu, Rui; Pan, Yan-xia

    2016-08-01

    Throughfall is known to be a critical component of the hydrological and biogeochemical cycles of forested ecosystems with inherently temporal and spatial variability. Yet little is understood concerning the throughfall variability of shrubs and the associated controlling factors in arid desert ecosystems. Here we systematically investigated the variability of throughfall of two morphological distinct xerophytic shrubs (Caragana korshinskii and Artemisia ordosica) within a re-vegetated arid desert ecosystem, and evaluated the effects of shrub structure and rainfall characteristics on throughfall based on heavily gauged throughfall measurements at the event scale. We found that morphological differences were not sufficient to generate significant difference (P < 0.05) in throughfall between two studied shrub species under the same rainfall and meteorological conditions in our study area, with a throughfall percentage of 69.7% for C. korshinskii and 64.3% for A. ordosica. We also observed a highly variable patchy pattern of throughfall beneath individual shrub canopies, but the spatial patterns appeared to be stable among rainfall events based on time stability analysis. Throughfall linearly increased with the increasing distance from the shrub base for both shrubs, and radial direction beneath shrub canopies had a pronounced impact on throughfall. Throughfall variability, expressed as the coefficient of variation (CV) of throughfall, tended to decline with the increase in rainfall amount, intensity and duration, and stabilized passing a certain threshold. Our findings highlight the great variability of throughfall beneath the canopies of xerophytic shrubs and the time stability of throughfall pattern among rainfall events. The spatially heterogeneous and temporally stable throughfall is expected to generate a dynamic patchy distribution of soil moisture beneath shrub canopies within arid desert ecosystems.

  4. Estimation Accuracy of air Temperature and Water Vapor Amount Above Vegetation Canopy Using MODIS Satellite Data

    Science.gov (United States)

    Tomosada, M.

    2005-12-01

    Estimation accuracy of the air temperature and water vapor amount above vegetation canopy using MODIS satellite data is indicated at AGU fall meeting. The air temperature and water vapor amount which are satisfied the multilayer energy budget model from the ground surface to the atmosphere are estimated. Energy budget models are described the fluxes of sensible heat and latent heat exchange for the ground surface and the vegetated surface. Used MODIS satellite data is the vegetated surface albedo which is calculated from visible and near infrared band data, the vegetated surface temperature, NDVI (Normalized Difference Vegetation Index), LAI (Leaf Area Index). Estimation accuracy of air temperature and water vapor amount above vegetation canopy is evaluated comparing with the value which is measured on a flux research tower in Tomakomai northern forest of Japan. Meteorological parameters such as temperature, wind speed, water vapor amount, global solar radiation are measured on a flux tower from the ground to atmosphere. Well, MODIS satellite observes at day and night, and it snows in Tomakomai in winter. Therefore, estimation accuracy is evaluated dividing on at daytime, night, snowfall day, and not snowfall day. There is the investigation of the undeveloped region such as dense forest and sea in one of feature of satellite observation. Since there is almost no meteorological observatory at the undeveloped region so far, it is hard to get the meteorological parameters. Besides, it is the one of the subject of satellite observation to get the amount of physical parameter. Although the amount of physical parameter such as surface temperature and concentration of chlorophyll-a are estimated by satellite, air temperature and amount of water vapor above vegetation canopy have not been estimated by satellite. Therefore, the estimation of air temperature and water vapor amount above vegetation canopy using satellite data is significant. Further, a highly accurate

  5. Ozone deposition in relation to canopy physiology in a mixed conifer forest in Denmark

    DEFF Research Database (Denmark)

    Ro-Poulsen, H.; Mikkelsen, Teis Nørgaard; Hovmand, M.F.;

    1998-01-01

    In this study CO(2) and H(2)O flux measurements made above a spruce forest was compared with the ozone flux to the canopy during growing season 1995. The fluxes were determined by micro meteorological gradient methods using a 36-m tall meteorological mast. The trees were about 12 m high and air...... uptake seems to follow very well the evapotranspiration. (C) 1998 Elsevier Science Ltd....

  6. Dryland wheat domestication changed the development of aboveground architecture for a well-structured canopy.

    Directory of Open Access Journals (Sweden)

    Pu-Fang Li

    Full Text Available We examined three different-ploidy wheat species to elucidate the development of aboveground architecture and its domesticated mechanism under environment-controlled field conditions. Architecture parameters including leaf, stem, spike and canopy morphology were measured together with biomass allocation, leaf net photosynthetic rate and instantaneous water use efficiency (WUE(i. Canopy biomass density was decreased from diploid to tetraploid wheat, but increased to maximum in hexaploid wheat. Population yield in hexaploid wheat was higher than in diploid wheat, but the population fitness and individual competition ability was higher in diploid wheats. Plant architecture was modified from a compact type in diploid wheats to an incompact type in tetraploid wheats, and then to a more compact type of hexaploid wheats. Biomass accumulation, population yield, harvest index and the seed to leaf ratio increased from diploid to tetraploid and hexaploid, associated with heavier specific internode weight and greater canopy biomass density in hexaploid and tetraploid than in diploid wheat. Leaf photosynthetic rate and WUEi were decreased from diploid to tetraploid and increased from tetraploid to hexaploid due to more compact leaf type in hexaploid and diploid than in tetraploid. Grain yield formation and WUEi were closely associated with spatial stance of leaves and stems. We conclude that the ideotype of dryland wheats could be based on spatial reconstruction of leaf type and further exertion of leaf photosynthetic rate.

  7. Feasibility of Field Evaluation of Rice Nitrogen Status From Reflectance Spectra of Canopy

    Institute of Scientific and Technical Information of China (English)

    WANGRENCAHO; WANGKE; 等

    1998-01-01

    Techniques for measurement of the N status of rice can be an aid to making manaement decisions with economic and environmental implications.A field experiment was conuced to identify spectral variables most sensitive to N deficiency detection in rice canopy with the possibiliy for their use as a management tool. Spectral and agronomic measurements were collected in the evaluation experiment of N status from rice canopy under vive N treatments in a silt loam soil ,Nitroen fertilization effects were seen across the entire wavelength measured .Red refectance decreased and near infrared reflectance increased with increasing N fertilizer application.Spectral differences between treatments were seen throughout the test period.The naer infrared refectnce/red reflectance ration (RVI) differed mored between treatment than between single bands.Variations in canopy reflectances due to other environmental factors were reduced by the use of RVI.In the spectral variables examined ,the RVI separated the treatments most effectively,and three or four treatments can be separated.Differences in spetral responses betwenn the treatments were attributable to leaf area index ,leaf chlorophyll concentration and phtomass,wich all changed with N fertilization.

  8. Modelling of the OASIS Energy Flux Measurements Using Two Canopy Concepts

    Science.gov (United States)

    Finkele, K.; Katzfey, J.J.; Kowalczyk, E.A.; McGregor, J.L.; Zhang, L.; Raupach, M.R.

    Two land surface schemes, SCAM and CSIRO9, were used to model the measured energy fluxes during the OASIS (Observations At Several Interacting Scales) field program. The measurements were taken at six sites along a 100 km rainfall gradient. Two types of simulations were conducted: (1) offline simulations forced with measured atmospheric input data at each of the six sites, and (2) regional simulations with the two land surface schemes coupled to the regional climate model DARLAM.The two land surface schemes employ two different canopy modelling concepts: in SCAM the vegetation is conceptually above the ground surface, while CSIRO9 employs the more commonly used `horizontally tiled' approach in which the vegetation cover is modelled by conceptually placing it beside bare ground. Both schemes utilize the same below-ground components (soil hydrological and thermal models) to reduce the comparison to canopy processes only. However, the ground heat flux, soil evaporation and evapotranspiration are parameterised by the two canopy treatments somewhat differently.

  9. A Method to Reconstruct the Solar-Induced Canopy Fluorescence Spectrum from Hyperspectral Measurements

    Directory of Open Access Journals (Sweden)

    Feng Zhao

    2014-10-01

    Full Text Available A method for canopy Fluorescence Spectrum Reconstruction (FSR is proposed in this study, which can be used to retrieve the solar-induced canopy fluorescence spectrum over the whole chlorophyll fluorescence emission region from 640–850 nm. Firstly, the radiance of the solar-induced chlorophyll fluorescence (Fs at five absorption lines of the solar spectrum was retrieved by a Spectral Fitting Method (SFM. The Singular Vector Decomposition (SVD technique was then used to extract three basis spectra from a training dataset simulated by the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes. Finally, these basis spectra were linearly combined to reconstruct the Fs spectrum, and the coefficients of them were determined by Weighted Linear Least Squares (WLLS fitting with the five retrieved Fs values. Results for simulated datasets indicate that the FSR method could accurately reconstruct the Fs spectra from hyperspectral measurements acquired by instruments of high Spectral Resolution (SR and Signal to Noise Ratio (SNR. The FSR method was also applied to an experimental dataset acquired in a diurnal experiment. The diurnal change of the reconstructed Fs spectra shows that the Fs radiance around noon was higher than that in the morning and afternoon, which is consistent with former studies. Finally, the potential and limitations of this method are discussed.

  10. Growth of soybean at future tropospheric ozone concentrations decreases canopy evapotranspiration and soil water depletion

    International Nuclear Information System (INIS)

    Tropospheric ozone is increasing in many agricultural regions resulting in decreased stomatal conductance and overall biomass of sensitive crop species. These physiological effects of ozone forecast changes in evapotranspiration and thus in the terrestrial hydrological cycle, particularly in intercontinental interiors. Soybean plots were fumigated with ozone to achieve concentrations above ambient levels over five growing seasons in open-air field conditions. Mean season increases in ozone concentrations ([O3]) varied between growing seasons from 22 to 37% above background concentrations. The objective of this experiment was to examine the effects of future [O3] on crop ecosystem energy fluxes and water use. Elevated [O3] caused decreases in canopy evapotranspiration resulting in decreased water use by as much as 15% in high ozone years and decreased soil water removal. In addition, ozone treatment resulted in increased sensible heat flux in all years indicative of day-time increase in canopy temperature of up to 0.7 deg. C. - Highlights: → Globally, tropospheric ozone is currently and will likely continue to increase into the future. → We examine the impact of elevated ozone on water use by soybean at the SoyFACE research facility. → High ozone grown soybean had reduced rates of evapotranspiration and higher soil moisture. → Increases in ozone have the potential to impact the hydrologic cycle where these crops are grown. - Soybean grown in elevated concentrations of ozone is shown to evapotranspire less water compared with soybean canopies grown under current atmospheric conditions.

  11. Asynchronous Amazon forest canopy phenology indicates adaptation to both water and light availability

    International Nuclear Information System (INIS)

    Amazon forests represent nearly half of all tropical vegetation biomass and, through photosynthesis and respiration, annually process more than twice the amount of estimated carbon (CO2) from fossil fuel emissions. Yet the seasonality of Amazon canopy cover, and the extent to which seasonal fluctuations in water availability and photosynthetically available radiation influence these processes, is still poorly understood. Implementing six remotely sensed data sets spanning nine years (2003–2011), with reported field and flux tower data, we show that southern equatorial Amazon forests exhibit a distinctive seasonal signal. Seasonal timing of water availability, canopy biomass growth and net leaf flush are asynchronous in regions with short dry seasons and become more synchronous across a west-to-east longitudinal moisture gradient of increasing dry season. Forest cover is responsive to seasonal disparities in both water and solar radiation availability, temporally adjusting net leaf flush to maximize use of these generally abundant resources, while reducing drought susceptibility. An accurate characterization of this asynchronous behavior allows for improved understanding of canopy phenology across contiguous tropical forests and their sensitivity to climate variability and drought. (letter)

  12. 3D lidar imaging for detecting and understanding plant responses and canopy structure.

    Science.gov (United States)

    Omasa, Kenji; Hosoi, Fumiki; Konishi, Atsumi

    2007-01-01

    Understanding and diagnosing plant responses to stress will benefit greatly from three-dimensional (3D) measurement and analysis of plant properties because plant responses are strongly related to their 3D structures. Light detection and ranging (lidar) has recently emerged as a powerful tool for direct 3D measurement of plant structure. Here the use of 3D lidar imaging to estimate plant properties such as canopy height, canopy structure, carbon stock, and species is demonstrated, and plant growth and shape responses are assessed by reviewing the development of lidar systems and their applications from the leaf level to canopy remote sensing. In addition, the recent creation of accurate 3D lidar images combined with natural colour, chlorophyll fluorescence, photochemical reflectance index, and leaf temperature images is demonstrated, thereby providing information on responses of pigments, photosynthesis, transpiration, stomatal opening, and shape to environmental stresses; these data can be integrated with 3D images of the plants using computer graphics techniques. Future lidar applications that provide more accurate dynamic estimation of various plant properties should improve our understanding of plant responses to stress and of interactions between plants and their environment. Moreover, combining 3D lidar with other passive and active imaging techniques will potentially improve the accuracy of airborne and satellite remote sensing, and make it possible to analyse 3D information on ecophysiological responses and levels of various substances in agricultural and ecological applications and in observations of the global biosphere. PMID:17030540

  13. A model for inferring canopy and underlying soil temperatures from multi-directional measurements

    Science.gov (United States)

    Otterman, J.; Brakke, T. W.; Susskind, J.

    1992-01-01

    A model is presented of thermal emission from a canopy/soil surface, where the soil and the leaves are at different temperatures, Tg and Tc, respectively. The temperature Tm corresponding to a radiometer reading is given by B sub lambda(Tm) = chi-B sub lambda(Tg) + (1-chi)B sub lambda(Tc), where B sub lambda denotes the Planck blackbody function at wavelength lambda, chi specifies the fraction of the field of view occupied by the soil at a given view direction, and an emissivity of 1.0 is assumed for the plants and the soil. It is observed that at large view zenith angles, only the plants are effectively seen, and therefore Tc can be determined from the observations a large zenith angles, to the extent that such observations are practical. Water stress can produce an increase of chi and thus tends to produce an exaggerated increase in the observed temperature compared to the actual increase in canopy temperature. These effects are analyzed for a simulated soybean canopy.

  14. Polarimetric, Two-Color, Photon-Counting Laser Altimeter Measurements of Forest Canopy Structure

    Science.gov (United States)

    Harding, David J.; Dabney, Philip W.; Valett, Susan

    2011-01-01

    Laser altimeter measurements of forest stands with distinct structures and compositions have been acquired at 532 nm (green) and 1064 nm (near-infrared) wavelengths and parallel and perpendicular polarization states using the Slope Imaging Multi-polarization Photon Counting Lidar (SIMPL). The micropulse, single photon ranging measurement approach employed by SIMPL provides canopy structure measurements with high vertical and spatial resolution. Using a height distribution analysis method adapted from conventional, 1064 nm, full-waveform lidar remote sensing, the sensitivity of two parameters commonly used for above-ground biomass estimation are compared as a function of wavelength. The results for the height of median energy (HOME) and canopy cover are for the most part very similar, indicating biomass estimations using lidars operating at green and near-infrared wavelengths will yield comparable estimates. The expected detection of increasing depolarization with depth into the canopies due to volume multiple-scattering was not observed, possibly due to the small laser footprint and the small detector field of view used in the SIMPL instrument. The results of this work provide pathfinder information for NASA's ICESat-2 mission that will employ a 532 nm, micropulse, photon counting laser altimeter.

  15. Algorithm for Extracting Digital Terrain Models under Forest Canopy from Airborne LiDAR Data

    Directory of Open Access Journals (Sweden)

    Almasi S. Maguya

    2014-07-01

    Full Text Available Extracting digital elevationmodels (DTMs from LiDAR data under forest canopy is a challenging task. This is because the forest canopy tends to block a portion of the LiDAR pulses from reaching the ground, hence introducing gaps in the data. This paper presents an algorithm for DTM extraction from LiDAR data under forest canopy. The algorithm copes with the challenge of low data density by generating a series of coarse DTMs by using the few ground points available and using trend surfaces to interpolate missing elevation values in the vicinity of the available points. This process generates a cloud of ground points from which the final DTM is generated. The algorithm has been compared to two other algorithms proposed in the literature in three different test sites with varying degrees of difficulty. Results show that the algorithm presented in this paper is more tolerant to low data density compared to the other two algorithms. The results further show that with decreasing point density, the differences between the three algorithms dramatically increased from about 0.5m to over 10m.

  16. Impact of heat stress on crop yield—on the importance of considering canopy temperature

    International Nuclear Information System (INIS)

    Increasing crop productivity while simultaneously reducing the environmental footprint of crop production is considered a major challenge for the coming decades. Even short episodes of heat stress can reduce crop yield considerably causing low resource use efficiency. Studies on the impact of heat stress on crop yields over larger regions generally rely on temperatures measured by standard weather stations at 2 m height. Canopy temperatures measured in this study in field plots of rye were up to 7 °C higher than air temperature measured at typical weather station height with the differences in temperatures controlled by soil moisture contents. Relationships between heat stress and grain number derived from controlled environment studies were only confirmed under field conditions when canopy temperature was used to calculate stress thermal time. By using hourly mean temperatures measured by 78 weather stations located across Germany for the period 1994–2009 it is estimated, that mean yield declines in wheat due to heat stress during flowering were 0.7% when temperatures are measured at 2 m height, but yield declines increase to 22% for temperatures measured at the ground. These results suggest that canopy temperature should be simulated or estimated to reduce uncertainty in assessing heat stress impacts on crop yield. (letter)

  17. Characterizing canopy biochemistry from imaging spectroscopy and its application to ecosystem studies

    Science.gov (United States)

    Kokaly, R.F.; Asner, G.P.; Ollinger, S.V.; Martin, M.E.; Wessman, C.A.

    2009-01-01

    For two decades, remotely sensed data from imaging spectrometers have been used to estimate non-pigment biochemical constituents of vegetation, including water, nitrogen, cellulose, and lignin. This interest has been motivated by the important role that these substances play in physiological processes such as photosynthesis, their relationships with ecosystem processes such as litter decomposition and nutrient cycling, and their use in identifying key plant species and functional groups. This paper reviews three areas of research to improve the application of imaging spectrometers to quantify non-pigment biochemical constituents of plants. First, we examine recent empirical and modeling studies that have advanced our understanding of leaf and canopy reflectance spectra in relation to plant biochemistry. Next, we present recent examples of how spectroscopic remote sensing methods are applied to characterize vegetation canopies, communities and ecosystems. Third, we highlight the latest developments in using imaging spectrometer data to quantify net primary production (NPP) over large geographic areas. Finally, we discuss the major challenges in quantifying non-pigment biochemical constituents of plant canopies from remotely sensed spectra.

  18. Crop Ground Cover Fraction and Canopy Chlorophyll Content Mapping using RapidEye imagery

    Science.gov (United States)

    Zillmann, E.; Schonert, M.; Lilienthal, H.; Siegmann, B.; Jarmer, T.; Rosso, P.; Weichelt, T.

    2015-04-01

    Remote sensing is a suitable tool for estimating the spatial variability of crop canopy characteristics, such as canopy chlorophyll content (CCC) and green ground cover (GGC%), which are often used for crop productivity analysis and site-specific crop management. Empirical relationships exist between different vegetation indices (VI) and CCC and GGC% that allow spatial estimation of canopy characteristics from remote sensing imagery. However, the use of VIs is not suitable for an operational production of CCC and GGC% maps due to the limited transferability of derived empirical relationships to other regions. Thus, the operational value of crop status maps derived from remotely sensed data would be much higher if there was no need for reparametrization of the approach for different situations. This paper reports on the suitability of high-resolution RapidEye data for estimating crop development status of winter wheat over the growing season, and demonstrates two different approaches for mapping CCC and GGC%, which do not rely on empirical relationships. The final CCC map represents relative differences in CCC, which can be quickly calibrated to field specific conditions using SPAD chlorophyll meter readings at a few points. The prediction model is capable of predicting SPAD readings with an average accuracy of 77%. The GGC% map provides absolute values at any point in the field. A high R2 value of 80% was obtained for the relationship between estimated and observed GGC%. The mean absolute error for each of the two acquisition dates was 5.3% and 8.7%, respectively.

  19. Near-continuous thermal monitoring of a diverse tropical forest canopy

    Science.gov (United States)

    Pau, S.; Still, C. J.; Kim, Y.; Detto, M.

    2015-12-01

    Tropical species may be highly sensitive to temperature increases associated with climate change because of their narrow thermal tolerances. Recent work has highlighted the importance of temperature in tropical forest function, however most studies use air temperature measurements from sparse meteorological stations even though surface temperatures are known to deviate from air temperatures. Tropical organisms exist in microclimates that are highly variable in space and time and not easily measured in natural environments. This is in part because of the complex structure of tropical forests and the potential for organisms themselves to modify their own environment. In the case of plants, leaf temperature is linked to the water and surface energy balance of their microenvironment. Here we present results from near-continuous thermal camera monitoring of the forest canopy in Barro Colorado Island, Panama (5-minute intervals for approximately 9 months). We compare daytime (maximum) vs. nighttime (minimum) differences between canopy temperature and air temperature, relative humidity, solar radiation, and precipitation. On average, canopy temperatures are consistently ~2 degrees Celsius higher than air temperatures. These data can paired with flux tower data on-site and used to advance understanding of temperature controls on the structure and function of tropical forests, such as carbon assimilation, phenology, and habitat monitoring, and can be integrated into models to improve predictions of tropical forest response to future climate change.

  20. Ecology and conservation of a rare, old-growth-associated canopy lichen in a silvicultural landscape

    Science.gov (United States)

    Rosso, A.L.; McCune, B.; Rambo, T.

    2000-01-01

    Nephroma occultum Wetm. is a rare, epiphytic lichen associated with old-growth forests of northwestern North America. We describe its distribution, abundance, and habitat within the managed landscape of a southwestern Oregon watershed. Because this species is found mainly in the canopy, we used direct canopy access (tree climbing) in combination with ground (litter) searches for our surveys. We recommend this dual approach when confident determination of presence or absence of a canopy species is needed. Our surveys confirm that N. occultum is a rare old-growth associate within the area of this study, the southernmost extension of its known range. It was both rare across the landscape and uncommon in our primary study site, a 500 yr old stand. It was most often found growing close to the trunk on branches of large Pseudotsuga menziesii, but its distribution was sporadic even within an old-growth stand. The scarcity of very old stands, in combination with the limited ability of this species to disperse within and between stands, has likely contributed to its rarity within the watershed. Management for N. occultum should focus on populations and habitat needs rather than on individuals. Our calculations show that cutting with retention of individual trees surrounded by small buffers could result in the eventual loss of N. occultum from the study area.

  1. Asplenium bird’s nest ferns in rainforest canopies are climate-contingent refuges for frogs

    Directory of Open Access Journals (Sweden)

    Brett R. Scheffers

    2014-12-01

    Full Text Available Epiphytes are important for canopy dwelling organisms because they provide a cool and moist microhabitat in the relatively hot and dry canopy. Here we examine whether epiphytic Asplenium ferns act as important habitats for arboreal frogs. We conducted extensive fern and habitat surveys for frogs in the Philippines, and complimented these surveys with roaming day and night canopy surveys to identify the full extent of habitat use across the vertical strata. We artificially dried ferns of various sizes to identify relationships between water and temperature buffering. Ferns are the preferred diurnal microhabitat and breeding habitat for arboreal frogs. A strong positive relationship exists between fern size and frog usage and abundance. Our drying experiments show that large ferns buffer maximum temperatures and reduce variability in temperatures, and buffering is directly linked to their hydration. Frogs are likely using large ferns for their moist, cool, environments for breeding and daytime retreat, which supports the buffered microhabitat hypothesis—these plants promote species coexistence through habitat creation and amelioration of physical stress. However, drying experiments suggest that this buffering is contingent on regular rainfall. Altered rainfall regimes could lead to the unexpected loss of the functional capacity of these important fern habitats.

  2. Modelling atmospheric dry deposition in urban areas using an urban canopy approach

    Directory of Open Access Journals (Sweden)

    N. Cherin

    2015-03-01

    Full Text Available Atmospheric dry deposition is typically modelled using an average roughness length, which depends on land use. This classical roughness-length approach cannot account for the spatial variability of dry deposition in complex settings such as urban areas. Urban canopy models have been developed to parametrise momentum and heat transfer. We extend this approach here to mass transfer, and a new dry deposition model based on the urban canyon concept is presented. It uses a local mixing-length parametrisation of turbulence within the canopy, and a description of the urban canopy via key parameters to provide spatially distributed dry deposition fluxes. Three different flow regimes are distinguished in the urban canyon depending on the height-to-width ratio of built areas: isolated roughness flow, wake interference flow and skimming flow. Differences between the classical roughness-length model and the model developed here are investigated. Sensitivity to key parameters are discussed. This approach provides spatially distributed dry deposition fluxes that depend on surfaces (streets, walls, roofs and flow regimes (recirculation and ventilation within the urban area.

  3. Modelling atmospheric dry deposition in urban areas using an urban canopy approach

    Directory of Open Access Journals (Sweden)

    N. Cherin

    2014-12-01

    Full Text Available Atmospheric dry deposition is typically modelled using an average roughness length, which depends on land use. This classical roughness-length approach cannot account for the spatial variability of dry deposition in complex settings such as urban areas. Urban canopy models have been developed to parametrise momentum and heat transfer. We extend this approach here to mass transfer and a new dry deposition model based on the urban canyon concept is presented. It uses a local mixing length parametrisation of turbulence within the canopy, and a description of the urban canopy via key parameters to provide spatially-distributed dry deposition fluxes. Three different flow regimes are distinguished in the urban canyon depending on the height-to-width ratio of built areas: isolated roughness flow, wake interference flow and skimming flow. Differences between the classical roughness-length model and the model developed here are investigated. Sensitivity to key parameters are discussed. This approach provides spatially-distributed dry deposition fluxes that depend on surfaces (streets, walls, roofs and flow regimes (recirculation and ventilation within the urban area.

  4. Transpiration rates and canopy conductance of Pinus radiata growing with different pasture understories in agroforestry systems.

    Science.gov (United States)

    Miller, Blair J.; Clinton, Peter W.; Buchan, Graeme D.; Robson, A. Bruce

    1998-01-01

    We measured tree transpiration and canopy conductance in Pinus radiata D. Don at two low rainfall sites of differing soil fertility in Canterbury, New Zealand. At the more fertile Lincoln site, we also assessed the effects of two common pasture grasses on tree transpiration and canopy conductance. At the less fertile Eyrewell Forest site, the effect of no understory, and the effects of irrigation in combination with mixtures of grass or legume species were determined. Tree xylem sap flux (F(d)') was measured by the heat pulse method. Total canopy conductance to diffusion of water vapor (G(t)) was calculated by inverting a simplified Penman-Monteith model. The different treatment effects were modeled by the simple decaying exponential relationship G(t) = G(tmax)e((-bD)), where D = air saturation deficit. At the Lincoln site, trees with an understory of cocksfoot had lower F(d)' and G(tmax) than trees with an understory of ryegrass, although the sensitivity of G(t) to increasing D (i.e., the value of b) did not differ between treatments. At the Eyrewell site, irrigation only increased F(d)' in the absence of an understory, whereas the presence of understory vegetation, or lack of irrigation, or both, significantly reduced G(tmax) and increased b. We conclude that the selection of understory species is critical in designing successful agroforestry systems for low rainfall areas.

  5. An analytical canopy-type model for wind farm-atmosphere interaction

    Science.gov (United States)

    Markfort, C. D.; Zhang, W.; Porte-Agel, F.

    2013-12-01

    We present a new model for the interactions between large-scale wind farms and the atmospheric boundary layer (ABL) based on similarity to canopy flows. Wind farms capture momentum from the atmospheric boundary layer both at the leading edge and from above. Based on our recent findings that turbulent flow in and above wind farms is similar to canopy-type flows, we examine this further with an analytical model that can predict the development length of the wind farm flow as well as vertical momentum absorption. Within the region of flow development, momentum is advected into the wind farm and wake turbulence draws excess momentum in from between turbines. This is characterized by large dispersive fluxes of momentum. Once the flow within the farm is developed, the area-averaged velocity profile exhibits an inflection point, characteristic of canopy-type flows. The inflected velocity profile is associated with the presence of a dominant characteristic turbulence scale, which may be responsible for a significant portion of the vertical momentum flux. Prediction of this scale is useful for determining the amount of available power for harvesting. The new model is tested with results from wind tunnel experiments, which characterize the turbulent flow in and above model wind farms. The model is useful for representing wind farms in meteorological and wind resource assessment models, for optimizing wind turbine spacing and layout, and for assessing the impacts of wind farms on nearby wind resources and the environment.

  6. Phenology, seed dispersal and difficulties in natural recruitment of the canopy tree Pachira quinata (Malvaceae).

    Science.gov (United States)

    Castellanos, Maria Clara; Stevenson, Pablo R

    2011-06-01

    Life history and recruitment information of tropical trees in natural populations is scarce even for important commercial species. This study focused on a widely exploited Neotropical canopy species, Pachira quinata (Malvaceae), at the southernmost, wettest limit of its natural distribution, in the Colombian Amazonia. We studied phenological patterns, seed production and natural densities; assessed the importance of seed dispersal and density-dependent effects on recruitment, using field experiments. At this seasonal forest P. quinata was overrepresented by large adult trees and had very low recruitment caused by the combination of low fruit production, high seed predation and very high seedling mortality under continuous canopies mostly due to damping off pathogens. There was no evidence of negative distance or density effects on recruitment, but a clear requirement of canopy gaps for seedling survival and growth, where pathogen incidence was drastically reduced. In spite of the strong dependence on light for survival of seedlings, seeds germinated readily in the dark. At the study site, the population of P. quinata appeared to be declining, likely because recruitment depended on the rare combination of large gap formation with the presence of reproductive trees nearby. The recruitment biology of this species makes it very vulnerable to any type of logging in natural populations. PMID:21717860

  7. High resolution measurements of scattering in wheat canopies - implications for crop parameter retrieval

    Science.gov (United States)

    Brown, Sarah C. M.; Quegan, Shaun; Morrison, Keith; Bennett, John C.; Cookmartin, Geoff

    2002-01-01

    Polarimetric X and C band measurements by the University of Sheffield GB-SAR indoor system provide three-dimensional images of the scattering processes in wheat canopies, at resolutions of around a wavelength (3-6 cm). The scattering shows a pronounced layered structure, with strong returns from the soil and the flag leaves, and in some cases a second leaf layer. Differential attenuation at H and V polarisation, due to the predominantly vertical structure of the wheat stems and flag leaves, gives rise to marked effects. Direct return from the canopy exceeds the soil return at larger incidence angles at VV and for both frequencies, but is comparable to or less than the soil return in all other cases. At HV, the apparent ground return is probably due to a double bounce mechanism, and volume scattering is never the dominent term. Direct sensing of the crop canopy is most effective at X band, VV and large incidence angles, under which conditions the return is dominated by the flag leaf layer. Field measurements with the outdoor GB-SAR system suggest however, that for sensitivity to biomass and reduced susceptibility to disturbances by rainfall, a two channel C band system operating at a medium range of incidence angles is preferred.

  8. Canopy Fuel Load Mapping of Mediterranean Pine Sites Based on Individual Tree-Crown Delineation

    Directory of Open Access Journals (Sweden)

    Giorgos Mallinis

    2013-12-01

    Full Text Available This study presents an individual tree-crown-based approach for canopy fuel load estimation and mapping in two Mediterranean pine stands. Based on destructive sampling, an allometric equation was developed for the estimation of crown fuel weight considering only pine crown width, a tree characteristic that can be estimated from passive imagery. Two high resolution images were used originally for discriminating Aleppo and Calabrian pines crown regions through a geographic object based image analysis approach. Subsequently, the crown region images were segmented using a watershed segmentation algorithm and crown width was extracted. The overall accuracy of the tree crown isolation expressed through a perfect match between the reference and the delineated crowns was 34.00% for the Kassandra site and 48.11% for the Thessaloniki site, while the coefficient of determination between the ground measured and the satellite extracted crown width was 0.5. Canopy fuel load values estimated in the current study presented mean values from 1.29 ± 0.6 to 1.65 ± 0.7 kg/m2 similar to other conifers worldwide. Despite the modest accuracies attained in this first study of individual tree crown fuel load mapping, the combination of the allometric equations with satellite-based extracted crown width information, can contribute to the spatially explicit mapping of canopy fuel load in Mediterranean areas. These maps can be used among others in fire behavior prediction, in fuel reduction treatments prioritization and during active fire suppression.

  9. Canopy In The Clouds: Achieving Broader Impacts in Graduate Student Research

    Science.gov (United States)

    Goldsmith, G. R.; Fulton, A. D.; Witherill, C. D.; Dukeshire, E. E.; Dawson, T. E.

    2010-12-01

    Federal science funding agencies are mandating that broader impacts associated with grant making are implemented because of the critical need to enhance scientific literacy and public perception of the roles science plays in society. As emphasis on broader impacts increases, scientists at all levels will need to incorporate explicit education and outreach activities into their programs. This will include a need to train and facilitate graduate student participation in outreach. For instance, the NSF includes broader impact statements in both their graduate research fellowship program and in their doctoral dissertation improvement grants. Here we present a collaborative science educational multimedia project initiated by a graduate student. Canopy In The Clouds uses interactive and immersive media designed around a tropical montane cloud forest as a platform for K-12 earth and life science education. Presented free of cost via the web in English and Spanish, Canopy In The Clouds has resources for students, educators and the general public. This includes a growing body of lesson plans standardized to current National Science Education Standards. We discuss the opportunities, challenges, and rewards associated with balancing research and outreach, interdisciplinary collaboration, and obtaining funding as a graduate student for such an effort. Finally, we consider how graduate student programs in the sciences can consider formalizing training in broader impacts and outreach. Canopy In The Clouds provides an example of effective science outreach, as well as a template for considering future best practices.

  10. Canopy gas exchange of white spruce in contrasting habitats near the Arctic treeline in northwest Alaska

    Science.gov (United States)

    Sullivan, P.; Mcnown, R. W.; Sveinbjornsson, B.

    2011-12-01

    Recent work near the Arctic treeline has revealed that an increasing number of white spruce are showing negative growth responses to rising air temperatures. Researchers have speculated that these negative responders are experiencing warm temperature-induced drought stress. Measurements of white spruce needle gas exchange near the Arctic treeline are rare and, to our knowledge, measurements of whole canopy gas exchange have not been made. In this study, we measured sap flow to estimate whole canopy transpiration at hourly intervals for the entire growing seasons of 2010 and 2011 in white spruce growing on a riverside terrace, in a hillslope forest and at the treeline. We used weekly measurements of needle-scale photosynthesis, transpiration and needle δ13C to estimate water use efficiency at each site. We then applied these estimates of water use efficiency to our sap flow data in order to estimate hourly whole canopy photosynthesis at each site for the two growing seasons. Our results show evidence of stomatal control when the atmospheric vapor pressure deficit exceeds approximately 1.0 kPa, but no evidence of complete stomatal closure. Trees growing on the riverside terrace, where soils are relatively warm and dry, are more efficient in their water use, have greater leaf area and assimilate more carbon per unit basal diameter than trees in the forest and at the treeline. We found that the month of September, after growth has almost completely ceased, can be an important time for carbon uptake in white spruce near the Arctic treeline.

  11. Diagnosing Model Errors in Canopy-Atmosphere Exchange Using Empirical Orthogonal Functions

    Science.gov (United States)

    Drewry, D.; Albertson, J.

    2004-12-01

    Multi-layer canopy process models (MLCPMs) have been established as tools for estimating local-scale canopy-atmosphere scalar (carbon dioxide, heat and water vapor) exchange as well as testing hypotheses regarding the mechanistic functioning of complex vegetated land surfaces and the interactions between vegetation and the local microenvironment. These model frameworks are composed of a coupled set of component submodels relating radiation attenuation and absorption, photosynthesis, turbulent mixing, stomatal conductance, surface energy balance and soil and subsurface processes. Submodel formulations have been validated for a variety of ecosystems under varying environmental conditions. However, each submodel component requires parameter values that are known to vary seasonally as canopy structure changes, and over shorter periods characterized by shifts in the environmental regime. The temporal dependence of submodel parameters limits application of MLCPMs to short-term integrations for which a specific parameterization can be trusted. We present a novel application of empirical orthogonal function (EOF) analysis to the identification of the primary source of MLCPM error. Carbon dioxide (CO2) concentration profiles, a commonly collected and underutilized data source, are the observed quantity in this analysis. The technique relies on an ensemble of model runs transformed to EOF space to determine the characteristic patterns of model error associated with specific submodel parameters. These patterns provide a basis onto which error residual (modeled - measured) CO2 concentration profiles can be projected to identify the primary source of model error. Synthetic tests and application to field data collected at Duke Forest (North Carolina, USA) are presented.

  12. [Establishment of The Crop Growth and Nitrogen Nutrition State Model Using Spectral Parameters Canopy Cover].

    Science.gov (United States)

    Tao, Zhi-Qiang; Bagum, Shamim Ara; Ma, Wei; Zhou, Bao-yuan; Fu, Jin-dong; Cui, Ri-xian; Sun, Xue-fang; Zhao, Ming

    2016-01-01

    In order to explore a non-destructive monitoring technique, the use of digital photo pixels canopy cover (CC) diagnosis and prediction on maize growth and its nitrogen nutrition status. This study through maize canopy digital photo images on relationship between color index in the photo and the leaf area index (LAI), shoot dry matter weight (DM), leaf nitrogen content percentage (N%). The test conducted in the Chinese Academy of Agricultural Science from 2012 to 2013, based on Maize canopy Visual Image Analysis System developed by Visual Basic Version 6.0, analyzed the correlation of CC, color indices, LAI, DM, N% on maize varieties (Zhongdan909, ZD 909) under three nitrogen levels treatments, furthermore the indicators significantly correlated were fitted with modeling, The results showed that CC had a highly significant correlation with LAI (r = 0.93, p camera on real-time undamaged rapid monitoring and prediction for maize growth conditions and its nitrogen nutrition status. This research finding is to be verified in the field experiment, and further analyze the applicability throughout the growing period in other maize varieties and different planting density. PMID:27228773

  13. Growth of soybean at future tropospheric ozone concentrations decreases canopy evapotranspiration and soil water depletion

    Energy Technology Data Exchange (ETDEWEB)

    Bernacchi, Carl J., E-mail: bernacch@illinois.edu [Global Change and Photosynthesis Research Unit, United States Department of Agriculture Agricultural Research Service, Urbana, IL 61801 (United States); Institute for Genomic Biology and Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 (United States); Leakey, Andrew D.B. [Institute for Genomic Biology and Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 (United States); Kimball, Bruce A. [USDA-ARS US Arid-Land Agricultural Research Center, 21881 N. Cardon Lane, Maricopa, AZ 85238 (United States); Ort, Donald R. [Global Change and Photosynthesis Research Unit, United States Department of Agriculture Agricultural Research Service, Urbana, IL 61801 (United States); Institute for Genomic Biology and Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 (United States)

    2011-06-15

    Tropospheric ozone is increasing in many agricultural regions resulting in decreased stomatal conductance and overall biomass of sensitive crop species. These physiological effects of ozone forecast changes in evapotranspiration and thus in the terrestrial hydrological cycle, particularly in intercontinental interiors. Soybean plots were fumigated with ozone to achieve concentrations above ambient levels over five growing seasons in open-air field conditions. Mean season increases in ozone concentrations ([O{sub 3}]) varied between growing seasons from 22 to 37% above background concentrations. The objective of this experiment was to examine the effects of future [O{sub 3}] on crop ecosystem energy fluxes and water use. Elevated [O{sub 3}] caused decreases in canopy evapotranspiration resulting in decreased water use by as much as 15% in high ozone years and decreased soil water removal. In addition, ozone treatment resulted in increased sensible heat flux in all years indicative of day-time increase in canopy temperature of up to 0.7 deg. C. - Highlights: > Globally, tropospheric ozone is currently and will likely continue to increase into the future. > We examine the impact of elevated ozone on water use by soybean at the SoyFACE research facility. > High ozone grown soybean had reduced rates of evapotranspiration and higher soil moisture. > Increases in ozone have the potential to impact the hydrologic cycle where these crops are grown. - Soybean grown in elevated concentrations of ozone is shown to evapotranspire less water compared with soybean canopies grown under current atmospheric conditions.

  14. Correcting attenuation effects caused by interactions in the forest canopy in full-waveform airborne laser scanner data

    Science.gov (United States)

    Richter, K.; Stelling, N.; Maas, H.-G.

    2014-08-01

    Full-waveform airborne laser scanning offers a great potential for various forestry applications. Especially applications requiring information on the vertical structure of the lower canopy parts benefit from the great amount of information contained in waveform data. To enable the derivation of vertical forest canopy structure, the development of suitable voxel based data analysis methods is straightforward. Beyond extracting additional 3D points, it is very promising to derive the voxel attributes from the digitized waveform directly. For this purpose, the differential backscatter cross sections have to be projected into a Cartesian voxel structure. Thereby the voxel entries represent amplitudes of the cross section and can be interpreted as a local measure for the amount of pulse reflecting matter. However, the "history" of each laser echo pulse is characterized by attenuation effects caused by reflections in higher regions of the crown. As a result, the received waveform signals within the canopy have a lower amplitude than it would be observed for an identical structure without the previous canopy structure interactions (Romanczyk et al., 2012). If the biophysical structure is determined from the raw waveform data, material in the lower parts of the canopy is thus under-represented. To achieve a radiometrically correct voxel space representation the loss of signal strength caused by partial reflections on the path of a laser pulse through the canopy has to be compensated. In this paper, we present an integral approach correcting the waveform at each recorded sample. The basic idea of the procedure is to enhance the waveform intensity values in lower parts of the canopy for portions of the pulse intensity, which have been reflected (and thus blocked) in higher parts of the canopy. The paper will discuss the developed correction method and show results from a validation both with synthetic and real world data.

  15. Seasonal Variation of the Canopy Structure Parameters and Its Correlation with Yield-Related Traits in Sugarcane

    OpenAIRE

    Jun Luo; Youxiong Que; Hua Zhang; Liping Xu

    2013-01-01

    Population structure determines sugarcane yield, of which canopy structure is a key component. To fully understand the relations between sugarcane yield and parameters of the canopy structure, 17 sugarcane varieties were investigated at five growth stages. The results indicated that there were significant differences between characterized parameters among sugarcane populations at different growth stages. During sugarcane growth after planting, leaf area index (LAI) and leaf distribution (LD) ...

  16. Forest Canopy Heights in the Pacific Northwest Based on InSAR Phase Discontinuities across Short Spatial Scales

    OpenAIRE

    Veronica Prush; Rowena Lohman

    2014-01-01

    Rapid land use changes are substantially altering the global carbon budget, yet quantifying the impact of these changes, or assessing efforts to mitigate them, remains challenging. Methods for assessing forest carbon range from precise ground surveys to remote-sensing approaches that provide proxies for canopy height and structure. We introduce a method for extracting a proxy for canopy heights from Interferometric Synthetic Aperture Radar (InSAR) data. Our method focuses on short-spatial sca...

  17. Canopy characteristics and behavior of Nellore heifers in Brachiaria brizantha pastures under different grazing heights at a continuous stocking rate

    OpenAIRE

    Daniel Rume Casagrande; Mariana Vieira Azenha; André Luis da Silva Valente; Bruno Ramalho Vieira; Matheus Henrique Moretti; Ana Cláudia Ruggieri; Telma Teresinha Berchielli; Ricardo Andrade Reis

    2011-01-01

    The objective of this study was to evaluate the Brachiaria brizantha cv. Marandu canopy structure maintained at different grazing heights under a continuous stocking rate and with a dietary supplementation strategy for the animals during the rainy season. This study also intended to observe the relationships of these variables with the grazing behaviors of the heifers. The effects of three canopy heights (15, 25 and 35 cm) were evaluated in association with three types of supplements: one min...

  18. LEAF AREA INDEX ESTIMATION IN VINEYARDS FROM UAV HYPERSPECTRAL DATA, 2D IMAGE MOSAICS AND 3D CANOPY SURFACE MODELS

    OpenAIRE

    I. Kalisperakis; Stentoumis, Ch.; L. Grammatikopoulos; K. Karantzalos

    2015-01-01

    The indirect estimation of leaf area index (LAI) in large spatial scales is crucial for several environmental and agricultural applications. To this end, in this paper, we compare and evaluate LAI estimation in vineyards from different UAV imaging datasets. In particular, canopy levels were estimated from i.e., (i) hyperspectral data, (ii) 2D RGB orthophotomosaics and (iii) 3D crop surface models. The computed canopy levels have been used to establish relationships with the measured ...

  19. Diversity of arbuscular mycorrhizal fungi associated with desert ephemerals growing under and beyond the canopies of Tamarisk shrubs

    Institute of Scientific and Technical Information of China (English)

    SHI Zhaoyong; ZHANG Liyun; FENG Gu; Christie Peter; TIAN Changyan; LI Xiaolin

    2006-01-01

    The arbuscular mycorrhizal (AM) fungal status of the four most common ephemeral plant species, Chorispora tenella (Pall.) DC., Ceratocephalus testiculatus (Crantz) Bess., Eremopyrum orientale (L.) Jaub et. Spash and Veronica campylopoda Boiss growing in an area dominated by Tamarisk shrubs (Tamarix spp.) was investigated.Samples of the four ephemerals and their rhizosphere soils were collected from underneath and beyond the canopies of the Tamarisk shrubs.Plant mycorrhizal status and soil AM fungal spore densities and community structures were analyzed and compared under and beyond the shrub canopies.The mycorrhizal colonization rates of the ephemerals and spore densities in their corresponding rhizosphere soils were significantly lower under the shrub canopies than beyond. The number of AM fungal species under the shrubs (12) was also lower than beyond the canopies (19). When soil properties in the rhizospheres of the four ephemerals were examined, available N and P and total P, organic matter content, total salt content and electrical conductivity (EC) were all higher under the canopies than beyond. In contrast, soil available K and pH showed no such trend. A total of 21 AM fungal species were isolated from rhizosphere soils of the four ephemerals. Five belonged to Acaulospora, one to Archaeospora, thirteen to Glomus and two to Paraglomus. We conclude that the canopies of Tamarix spp. exerted some influence on the AM status of the ephemerals and on the AM fungal communities and some of the properties of their rhizosphere soils.

  20. A worldwide analysis of within-canopy variations in leaf structural, chemical and physiological traits across plant functional types.

    Science.gov (United States)

    Niinemets, Ülo; Keenan, Trevor F; Hallik, Lea

    2015-02-01

    Extensive within-canopy light gradients importantly affect the photosynthetic productivity of leaves in different canopy positions and lead to light-dependent increases in foliage photosynthetic capacity per area (AA). However, the controls on AA variations by changes in underlying traits are poorly known. We constructed an unprecedented worldwide database including 831 within-canopy gradients with standardized light estimates for 304 species belonging to major vascular plant functional types, and analyzed within-canopy variations in 12 key foliage structural, chemical and physiological traits by quantitative separation of the contributions of different traits to photosynthetic acclimation. Although the light-dependent increase in AA is surprisingly similar in different plant functional types, they differ fundamentally in the share of the controls on AA by constituent traits. Species with high rates of canopy development and leaf turnover, exhibiting highly dynamic light environments, actively change AA by nitrogen reallocation among and partitioning within leaves. By contrast, species with slow leaf turnover exhibit a passive AA acclimation response, primarily determined by the acclimation of leaf structure to growth light. This review emphasizes that different combinations of traits are responsible for within-canopy photosynthetic acclimation in different plant functional types, and solves an old enigma of the role of mass- vs area-based traits in vegetation acclimation. PMID:25318596

  1. The impact of in-canopy wind profile formulations on heat flux estimation using the remote sensing-based two-source model for an open orchard canopy in southern Italy

    Directory of Open Access Journals (Sweden)

    C. Cammalleri

    2010-07-01

    Full Text Available For open orchard and vineyard canopies containing significant fractions of exposed soil (>50%, typical of Mediterranean agricultural regions, the energy balance of the vegetation elements is strongly influenced by heat exchange with the bare soil/substrate. For these agricultural systems a "two-source" approach, where radiation and turbulent exchange between the soil and canopy elements are explicitly modelled, appears to be the only suitable methodology for reliably assessing energy fluxes. In strongly clumped canopies, the effective wind speed profile inside and below the canopy layer can highly influence the partitioning of energy fluxes between the soil and vegetation components. To assess the impact of in-canopy wind profile on model flux estimates, an analysis of three different formulations is presented, including algorithms from Goudriaan (1977, Massman (1987 and Lalic et al. (2003. The in-canopy wind profile formulations are applied to the thermal-based Two-Source Energy Balance (TSEB model developed by Norman et al. (1995 and modified by Kustas and Norman (1999. High resolution airborne remote sensing images, collected over an agricultural area located in the western part of Sicily (Italy comprised primarily of vineyards, olive and citrus orchards, are used to derive all the input parameters need to apply the TSEB. The images were acquired from June to October 2008 and include a relatively wide range of meteorological and soil moisture conditions. A preliminary sensitivity analysis of the three wind profile algorithms highlight the dependence of wind speed just above the soil/substrate to leaf area index and canopy height over the typical canopy properties range of these agricultural area. It is found that differences in wind just above surface among the models is most significant under sparse and medium fractional cover conditions (20–60%. The TSEB model heat flux estimates are compared with micrometeorological measurements from a

  2. Effects of elevated atmospheric CO{sub 2} on canopy transpiration in senescent spring wheat

    Energy Technology Data Exchange (ETDEWEB)

    Grossman, S.; Kimball, B.A.; Hunsaker, D.J.; Long, S.P. et al

    1998-12-31

    The seasonal course of canopy transpiration and the diurnal courses of latent heat flux of a spring wheat crop were simulated for atmospheric CO{sub 2} concentrations of 370 {micro}mol mol{sup {minus}1} and 550 {micro}mol mol{sup {minus}1}. The hourly weather data, soil parameters and the irrigation and fertilizer treatments of the Free-Air Carbon Dioxide Enrichment wheat experiment in Arizona (1992/93) were used to drive the model. The simulation results were tested against field measurements with special emphasis on the period between anthesis and maturity. A model integrating leaf photosynthesis and stomatal conductance was scaled to a canopy level in order to be used in the wheat growth model. The simulated intercellular CO{sub 2} concentration, C{sub i} was determined from the ratio of C{sub i} to the CO{sub 2} concentration at the leaf surface, C{sub s}, the leaf to air specific humidity deficit and a possibly unfulfilled transpiration demand. After anthesis, the measured assimilation rates of the flag leaves decreased more rapidly than their stomatal conductances, leading to a rise in the C{sub i}/C{sub s} ratio. In order to describe this observation, an empirical model approach was developed which took into account the leaf nitrogen content for the calculation of the C{sub i}/C{sub s} ratio. Simulation results obtained with the new model version were in good agreement with the measurements. If changes in the C{sub i}/C{sub s} ratio accorded to the decrease in leaf nitrogen content during leaf senescence were not considered in the model, simulations revealed an underestimation of the daily canopy transpiration of up to twenty percent and a decrease in simulated seasonal canopy transpiration by ten percent. The measured reduction in the seasonal sum of canopy transpiration and soil evaporation owing to CO{sub 2} enrichment, in comparison, was only about five percent.

  3. The effect of land cover heterogeneity of MODIS pixel on canopy LAI estimation

    Science.gov (United States)

    Manninen, T.; Puttonen, N.

    2012-04-01

    The boreal zone land cover has a very significant influence on the northern hemisphere albedo and is an important component of the northern hemisphere carbon budget. Both albedo and the leaf area index (LAI) are one of the most important biophysical vegetation parameters and belong to the Essential Climate Variables (ECV) . In addition, in winter time the boreal forest albedo is a complicated combination of snow and canopy radiative properties, so that the albedo is a function of the canopy LAI. One possibility to estimate LAI using optical satellite data is by determination of spectral vegetation indices (SVIs), such as the reduced simple ratio (RSR). It uses the visible near infrared and short wave infrared channels. In large areas moderate resolution instruments, like MODIS, are suitable for LAI mapping. Yet, the heterogeneity of land cover in many boreal areas, for example in Finland, causes a challenge for LAI estimation. This effect was studied using several Landsat and MODIS images and the high resolution CORINE land cover map covering the same area in various parts of Finland. The atmospheric correction of the Landsat images was adjusted so that each MODIS pixel reflectance matched the average of the Landsat pixel reflectances within the MODIS pixel. The LAI values for Landsat and MODIS images were then determined using the RSR index. The LAI average of forested Landsat pixels was compared to the corresponding MODIS pixel LAI as a function of open water area fraction in the MODIS pixel. A regression function was determined to derive a method to correct the MODIS based LAI values with the open water area fraction. It turned out that the existence of open water in the MODIS pixels reduces the determined canopy LAI value on the average 30%. Also other land cover classes affect the LAI value, but the effect of water is largest, because the reflectance of water deviates so much from that of the canopy. The canopy LAI map of whole Finland was then calculated

  4. An Automated Comparative Observation System for Sun-Induced Chlorophyll Fluorescence of Vegetation Canopies.

    Science.gov (United States)

    Zhou, Xijia; Liu, Zhigang; Xu, Shan; Zhang, Weiwei; Wu, Jun

    2016-01-01

    Detecting sun-induced chlorophyll fluorescence (SIF) offers a new approach for remote sensing photosynthesis. However, to analyse the response characteristics of SIF under different stress states, a long-term time-series comparative observation of vegetation under different stress states must be carried out at the canopy scale, such that the similarities and differences in SIF change law can be summarized under different time scales. A continuous comparative observation system for vegetation canopy SIF is designed in this study. The system, which is based on a high-resolution spectrometer and an optical multiplexer, can achieve comparative observation of multiple targets. To simultaneously measure the commonly used vegetation index and SIF in the O₂-A and O₂-B atmospheric absorption bands, the following parameters are used: a spectral range of 475.9 to 862.2 nm, a spectral resolution of approximately 0.9 nm, a spectral sampling interval of approximately 0.4 nm, and the signal-to-noise ratio (SNR) can be as high as 1000:1. To obtain data for both the upward radiance of the vegetation canopy and downward irradiance data with a high SNR in relatively short time intervals, the single-step integration time optimization algorithm is proposed. To optimize the extraction accuracy of SIF, the FluorMOD model is used to simulate sets of data according to the spectral resolution, spectral sampling interval and SNR of the spectrometer in this continuous observation system. These data sets are used to determine the best parameters of Fraunhofer Line Depth (FLD), Three FLD (3FLD) and the spectral fitting method (SFM), and 3FLD and SFM are confirmed to be suitable for extracting SIF from the spectral measurements. This system has been used to observe the SIF values in O₂-A and O₂-B absorption bands and some commonly used vegetation index from sweet potato and bare land, the result of which shows: (1) the daily variation trend of SIF value of sweet potato leaves is

  5. An Automated Comparative Observation System for Sun-Induced Chlorophyll Fluorescence of Vegetation Canopies

    Directory of Open Access Journals (Sweden)

    Xijia Zhou

    2016-05-01

    Full Text Available Detecting sun-induced chlorophyll fluorescence (SIF offers a new approach for remote sensing photosynthesis. However, to analyse the response characteristics of SIF under different stress states, a long-term time-series comparative observation of vegetation under different stress states must be carried out at the canopy scale, such that the similarities and differences in SIF change law can be summarized under different time scales. A continuous comparative observation system for vegetation canopy SIF is designed in this study. The system, which is based on a high-resolution spectrometer and an optical multiplexer, can achieve comparative observation of multiple targets. To simultaneously measure the commonly used vegetation index and SIF in the O2-A and O2-B atmospheric absorption bands, the following parameters are used: a spectral range of 475.9 to 862.2 nm, a spectral resolution of approximately 0.9 nm, a spectral sampling interval of approximately 0.4 nm, and the signal-to-noise ratio (SNR can be as high as 1000:1. To obtain data for both the upward radiance of the vegetation canopy and downward irradiance data with a high SNR in relatively short time intervals, the single-step integration time optimization algorithm is proposed. To optimize the extraction accuracy of SIF, the FluorMOD model is used to simulate sets of data according to the spectral resolution, spectral sampling interval and SNR of the spectrometer in this continuous observation system. These data sets are used to determine the best parameters of Fraunhofer Line Depth (FLD, Three FLD (3FLD and the spectral fitting method (SFM, and 3FLD and SFM are confirmed to be suitable for extracting SIF from the spectral measurements. This system has been used to observe the SIF values in O2-A and O2-B absorption bands and some commonly used vegetation index from sweet potato and bare land, the result of which shows: (1 the daily variation trend of SIF value of sweet potato leaves is

  6. Integration of plant-based canopy sensors for site-specific nitrogen management

    Science.gov (United States)

    Shiratsuchi, Luciano Shozo

    The soil's nitrogen (N) supply can vary drastically in the field, spatially as well as temporally making any soil prediction difficult even with very detailed mapping. Consequently, a plant-based approach wherein the measured canopy can indicate the N needs in a reactive and spatially-variable way can be a better approach than mapping, because integrate the soil N supply and translate the crop need on-the-go. The first experiment evaluated the performance of various spectral indices for sensing N status of corn, where spectral variability might be confounded by water-induced variations in crop reflectance. We found that water and previous crops effects on vegetation indices (VI) must be considered, and also that some VIs are less susceptible to water with good ability for N differentiation. In the second experiment, the objective was to develop an approach that relies on local soil conditions as well as on active canopy sensor measurements for real-time adjustment of N application rate. We found that local variations in plant N availability must be considered to determine the optimal N rate on-the-go, and that the localized reference incorporated the spatial variability of the N-rich plot. Next, we determined the correlation between active canopy sensors assessments of N availability and ultrasonic sensor measurements of canopy height at several growth stages for corn. We found strong correlations between both sensors and that they had similar abilities to distinguish N-mediated differences in canopy development. The integrated use of both sensors improved the N estimation compared to the isolated use of either sensor. Based on these strong correlations, we developed an N recommendation algorithm based on ultrasonic plant height measurements to be used for on-the-go variable rate N application. Lastly, we evaluated the crop water status using infrared thermometry integrated with optical and ultrasonic sensors, we concluded that the integration of sensors was

  7. The Effects of Thermal Stratification on Clustering Properties of Canopy Turbulence

    Science.gov (United States)

    Cava, D.; Katul, G. G.

    2009-03-01

    The intermittent structure of turbulence within the canopy sublayer (CSL) is sensitive to the presence of foliage and to the atmospheric stability regime. How much of this intermittency originates from amplitude variability or clustering properties remains a vexing research problem for CSL flows. Using a five-level set of measurements collected within a dense hardwood canopy, the clustering properties of CSL turbulence and their dependence on atmospheric stability are explored using the telegraphic approximation (TA). The binary structure of the TA removes any amplitude variability from turbulent excursions but retains their zero-crossing behaviour, and thereby isolating the role of clustering in intermittency. A relationship between the spectral exponents of the actual and the TA series is derived across a wide range of atmospheric stability regimes and for several flow variables. This relationship is shown to be consistent with a relationship derived for long-memory and monofractal processes such as fractional Brownian motion (fBm). Moreover, it is demonstrated that for the longitudinal and vertical velocity components, the vegetation does not appreciably alter fine-scale clustering but atmospheric stability does. Stable atmospheric stability conditions is characterized by more fine scale clustering when compared to other atmospheric stability regimes. For scalars, fine-scale clustering above the canopy is similar to its velocity counterpart but is significantly increased inside the canopy, especially under stable stratification. Using simplified scaling analysis, it is demonstrated that clustering is much more connected to space than to time within the CSL. When comparing intermittency for flow variables and their TA series, it is shown that for velocity, amplitude variations modulate intermittency for all stability regimes. However, amplitude variations play only a minor role in scalar intermittency. Within the crown region of the canopy, a ‘double regime

  8. Ground-based imaging spectrometry of canopy phenology and chemistry in a deciduous forest

    Science.gov (United States)

    Toomey, M. P.; Friedl, M. A.; Frolking, S. E.; Hilker, T.; O'Keefe, J.; Richardson, A. D.

    2013-12-01

    Phenology, annual life cycles of plants and animals, is a dynamic ecosystem attribute and an important feedback to climate change. Vegetation phenology is commonly monitored at canopy to continental scales using ground based digital repeat photography and satellite remote sensing, respectively. Existing systems which provide sufficient temporal resolution for phenological monitoring, however, lack the spectral resolution necessary to investigate the coupling of phenology with canopy chemistry (e.g. chlorophyll, nitrogen, lignin-cellulose content). Some researchers have used narrowband (imaging spectrometers to investigate the coupling of canopy phenology and the leaf biochemistry of individual trees. During the growing season of April-October 2013 we deployed an imaging spectrometer with a spectral range of 371-1042 nm and resolution of ~5 nm (Surface Optics Corporation 710; San Diego, CA) on a 35 m tall tower at the Harvard Forest, Massachusetts. The image resolution was ~0.25 megapixels and the field of view encompassed approximately 20 individual tree crowns at a distance of 20-40 m. The instrument was focused on a mixed hardwoods canopy composed of 4 deciduous tree species and one coniferous tree species. Scanning was performed daily with an acquisition frequency of 30 minutes during daylight hours. Derived imagery were used to calculate a suite of published spectral indices used to estimate foliar content of key pigments: cholorophyll, carotenoids and anthocyanins. Additionally, we calculated the photochemical reflectance index (PRI) as well as the position and slope of the red edge as indicators of mid- to late-summer plant stress. Changes in the spectral shape and indices throughout the growing season revealed coupling of leaf biochemistry and phenology, as visually observed in situ. Further, the spectrally rich imagery provided well calibrated reflectance data to simulate vegetation index time series of common spaceborne remote sensing platforms such as the

  9. Influence of vegetation canopies on precipitation partitioning and isotope fractionation in northern upland catchments

    Science.gov (United States)

    Braun, Hannah; Tetzlaff, Doerthe; Soulsby, Chris; Weiler, Markus

    2016-04-01

    Climate change is predicted to have far reaching implications for northern high latitude regions including changing precipitation regimes and increasing temperatures in the coming decades. In many areas this will promote increased forest cover as a result of vegetation succession or mitigation measures. For example, in the Scottish Highlands, forest cover is increasing as a result of adaptive management and increased biofuel production. In the wet, windy Scottish hydroclimate this has the potential to significantly increase interception losses, reduce net precipitation and affect the spatial and temporal distribution of soil moisture. Recent studies have also shown that such processes may also change the isotopic signature of net rainfall in throughfall and stemflow with implications for using isotopes as hydrological tracers. Such effects may be exacerbated by projected higher temperatures and reduced summer precipitation. The main focus of this study was to quantify the effects of forest and non-forest vegetation canopies on the spatio-temporal variability of throughfall and stemflow in the Bruntland Burn, a 3.2 km2 montane experimental catchment in the Scottish Highlands. We investigated differences in both the quantity and isotopic composition of throughfall and stemflow under Scots Pine (Pinus sylvestris) forest and heather (Calluna vulgaris) moorland growing on podzolic soils. Altogether, 75 throughfall and 10 stemflow collectors were placed in four plots with different topographic positions and vegetation characteristics (two different aged Scots pine plantations and two heather sites) and canopy coverage was determined using digital photography. Over a 5 month sampling period, weekly throughfall samples were taken. We also analysed more than 1100 samples for stable isotopes δ18O and δD. Interception losses were 38% under moorland and up to 47% for the plantation sides. Both throughfall and stemflow amounts were found to be highly variable and were mostly

  10. Interpreting canopy development and physiology using a European phenology camera network at flux sites

    Science.gov (United States)

    Wingate, L.; Ogée, J.; Cremonese, E.; Filippa, G.; Mizunuma, T.; Migliavacca, M.; Moisy, C.; Wilkinson, M.; Moureaux, C.; Wohlfahrt, G.; Hammerle, A.; Hörtnagl, L.; Gimeno, C.; Porcar-Castell, A.; Galvagno, M.; Nakaji, T.; Morison, J.; Kolle, O.; Knohl, A.; Kutsch, W.; Kolari, P.; Nikinmaa, E.; Ibrom, A.; Gielen, B.; Eugster, W.; Balzarolo, M.; Papale, D.; Klumpp, K.; Köstner, B.; Grünwald, T.; Joffre, R.; Ourcival, J.-M.; Hellstrom, M.; Lindroth, A.; George, C.; Longdoz, B.; Genty, B.; Levula, J.; Heinesch, B.; Sprintsin, M.; Yakir, D.; Manise, T.; Guyon, D.; Ahrends, H.; Plaza-Aguilar, A.; Guan, J. H.; Grace, J.

    2015-10-01

    Plant phenological development is orchestrated through subtle changes in photoperiod, temperature, soil moisture and nutrient availability. Presently, the exact timing of plant development stages and their response to climate and management practices are crudely represented in land surface models. As visual observations of phenology are laborious, there is a need to supplement long-term observations with automated techniques such as those provided by digital repeat photography at high temporal and spatial resolution. We present the first synthesis from a growing observational network of digital cameras installed on towers across Europe above deciduous and evergreen forests, grasslands and croplands, where vegetation and atmosphere CO2 fluxes are measured continuously. Using colour indices from digital images and using piecewise regression analysis of time series, we explored whether key changes in canopy phenology could be detected automatically across different land use types in the network. The piecewise regression approach could capture the start and end of the growing season, in addition to identifying striking changes in colour signals caused by flowering and management practices such as mowing. Exploring the dates of green-up and senescence of deciduous forests extracted by the piecewise regression approach against dates estimated from visual observations, we found that these phenological events could be detected adequately (RMSE green and blue colour fractions derived from digital images could be modelled mechanistically using the PROSAIL model parameterised with information of seasonal changes in canopy leaf area and leaf chlorophyll and carotenoid concentrations. From a model sensitivity analysis we found that variations in colour fractions, and in particular the late spring `green hump' observed repeatedly in deciduous broadleaf canopies across the network, are essentially dominated by changes in the respective pigment concentrations. Using the model we

  11. Forest and Shrub Canopy Structure from Multiangle and High Resolution Passive Remote Sensing

    Science.gov (United States)

    Chopping, M. J.; Wang, Z.; Bull, M. A.; Duchesne, R.; North, M.

    2015-12-01

    The 3-D structure of forest and shrub canopies can be mapped using diverse technologies, with the most advanced being lidar and interferometric radar. Other approaches include various modes of interpretation of multi-angle imagery, high-resolution stereo photogrammetry, plant identification, delineation, and measurement from high-resolution panchromatic imagery, and image texture metrics. While active remote sensing will revolutionize mapping of canopy structure, there are currently limitations. High precision lidar will remain limited geographically until the launch of NASA's innovative Global Ecosystem Dynamics Investigation to the International Space Station in 2019 but even this mission will not see high latitude boreal forest, taiga, or shrubs in tundra because of the orbit. Radar-based methods must be calibrated using high quality data. Imagery from passive imagers acquired at a range of scales therefore has much value if it can be used to provide structure data at broader geographic and temporal scales. Here we report on canopy mapping at scales from 0.5 m to 250 m using high-resolution panchromatic imagery from satellite imagers and NASA's Multiangle Imaging Spectro-Radiometer (MISR), respectively. MISR-based 250 m aboveground biomass maps for the southwestern U.S. were assessed against the radar-derived North American Carbon Program National Biomass and Carbon Dataset 2000, showing good agreement (R2=0.80, RMSE=31 Mg ha-1 for the validation data set; and 0.76 and 18 Mg ha-1, respectively, for 1013 random points). For Oregon forests the best and worst cases were R2=0.90, RMSE=42 Mg ha-1 and R2=0.78, RMSE=62 Mg ha-1, respectively. For improved validation, the CANAPI algorithm was used to interpret high-resolution panchromatic imagery. In Sierra National forest, California, canopy cover estimates agreed well with those from field inventory (R2=0.92, RMSE=0.03). Height estimates gave R2=0.94 and relative RMSE=0.25 m for the range 3 m - 60 m, vs. lidar

  12. Experimental study on determining factors of canopy interception using artificial Christmas trees

    Science.gov (United States)

    Murakami, Shigeki; Toba, Tae

    2013-04-01

    Evaporation of canopy interception (CI) is a major component of water balance in forested areas. Theoretically, the evaporation amount is dependent on the tree height, i.e. aerodynamic roughness. Nevertheless, the theory does not always explain the observed results and the observational fact that CI during rainfall is proportional to the rainfall intensity makes the problem paradoxical (Murakami, 2006). The objective of this study is to try to find the determining factors of CI in terms of the stand structure using artificial Christmas trees that is easy to modify the height and tree density. Two kinds of artificial Christmas trees were used: a) 65 cm high with the maximum canopy diameter of 30 cm, and b) 150 cm high with the greatest canopy diameter of 75 cm. We set those trees on three trays and left them outside to measure CI using natural rainfall. Artificial trees a) were set on Tray #1 and #2 measuring 178-cm-square. Artificial trees b) were fixed on Tray #3 with a size of 360-cm-square. Tray #1 was a control and the stand structure was unchanged throughout the experiment, i.e. tree height was 65 cm with 41 stems on the tray. Three experimental runs were conducted; Run #1 and #2 were to compare the effect of stem length (tree height) on CI. Run #3 was to evaluate the effect of thinning. The initial number of trees on each tray was 41 (Run #1 and #2), and it was reduced to 25 after thinning for Tray #2 and #3 (Run #3). At Run #1 tree heights of Tray #2 and #3 were 90 cm and 150 cm (original), respectively, and at Run #2 and #3 they were 120 cm and 240 cm, respectively. In Tray #1 canopy interception rate (IR, the ratio of CI to gross rainfall) was constant (12.1% to 13.3%). IR increased with tree height for each tree, i.e. a) and b). In Tray #2, i.e. tree a), IR increased from 19.7% to 22.8% after thinning, while in Tray #3, i.e. tree b), it diminished from 20.0% to 13.8%. Preliminary analysis showed that hourly CI is clearly proportional to hourly rainfall

  13. Ecohydrological responses of dense canopies to environmental variability: 2. Role of acclimation under elevated CO2

    Science.gov (United States)

    Drewry, D. T.; Kumar, P.; Long, S.; Bernacchi, C.; Liang, X.-Z.; Sivapalan, M.

    2010-12-01

    The ability to accurately predict land-atmosphere exchange of mass, energy, and momentum over the coming century requires the consideration of plant biochemical, ecophysiological, and structural acclimation to modifications of the ambient environment. Amongst the most important environmental changes experienced by terrestrial vegetation over the last century has been the increase in ambient carbon dioxide (CO2) concentrations, with a projected doubling in CO2 from preindustrial levels by the middle of this century. This change in atmospheric composition has been demonstrated to significantly alter a variety of leaf and plant properties across a range of species, with the potential to modify land-atmosphere interactions and their associated feedbacks. Free Air Carbon Enrichment (FACE) technology has provided significant insight into the functioning of vegetation in natural conditions under elevated CO2, but remains limited in its ability to quantify the exchange of CO2, water vapor, and energy at the canopy scale. This paper addresses the roles of ecophysiological, biochemical, and structural plant acclimation on canopy-scale exchange of CO2, water vapor, and energy through the application of a multilayer canopy-root-soil model (MLCan) capable of resolving changes induced by elevated CO2 through the canopy and soil systems. Previous validation of MLCan flux estimates were made for soybean and maize in the companion paper using a record of six growing seasons of eddy covariance data from the Bondville Ameriflux site. Observations of leaf-level photosynthesis, stomatal conductance, and surface temperature collected at the SoyFACE experimental facility in central Illinois provide a basis for examining the ability of MLCan to capture vegetation responses to an enriched CO2 environment. Simulations of control (370 [ppm]) and elevated (550 [ppm]) CO2 environments allow for an examination of the vertical variation and canopy-scale responses of vegetation states and fluxes

  14. Effects of planting pattern on the interception of solar radiation by the canopy and the light extinction coefficient of the canopy in rice plants [Oryza sativa] direct-sown in a submerged paddy field

    International Nuclear Information System (INIS)

    In order to investigate effects of planting pattern on the interception of solar radiation by the canopy and the light extinction coefficient of the canopy in rice, the rice plants direct-sown in a submerged paddy field were grown in six planting patterns (A through F). In plots A, B and C, the planting density was 20.7 hills m-2 (22 cm×22 cm spacing) with five, three and one plant per hill, respectively, and in plots D, E and F, the planting density was 82.6 hills m-2 (11 cm×11 cm spacing), 44.4 hills m-2 (15 cm×15 cm spacing), and 44.4 hills m-2 (7.5 cm×30 cm spacing), respectively, with one plant per hill. At the tillering stage, the greater the tiller number and leaf area index, the larger the interception of solar radiation by the canopy. The tiller number was larger in the plots with one plant per hill, higher plant density and square arrangement of hills. At the early ripening stage, the light extinction coefficient of the canopy was smaller in such plots. The larger the average inclination of leaf blades, the smaller the light extinction coefficient of the canopy. The difference in stem inclination in the canopy might be responsible for the difference in the inclination of leaf blades. In the plots with one plant per hill, higher plant density and square arrangement of hills, stems were more erect. Within the range of planting patterns in our study, both the rate of interception of solar radiation by the canopy and the light-intercepting characteristics were significantly more favorable in the plots with one plant per hill, higher density and a square arrangement of hills

  15. Prognostic land surface albedo from a dynamic global vegetation model clumped canopy radiative transfer scheme and satellite-derived geographic forest heights

    Science.gov (United States)

    Kiang, N. Y.; Yang, W.; Ni-Meister, W.; Aleinov, I. D.; Jonas, J.

    2014-12-01

    Vegetation cover was introduced into general circulations models (GCMs) in the 1980's to account for the effect of land surface albedo and water vapor conductance on the Earth's climate. Schemes assigning canopy albedoes by broad biome type have been superceded in 1990's by canopy radiative transfer schemes for homogeneous canopies obeying Beer's Law extinction as a function of leaf area index (LAI). Leaf albedo and often canopy height are prescribed by plant functional type (PFT). It is recognized that this approach does not effectively describe geographic variation in the radiative transfer of vegetated cover, particularly for mixed and sparse canopies. GCM-coupled dynamic global vegetation models (DGVMs) have retained these simple canopy representations, with little further evaluation of their albedos. With the emergence lidar-derived canopy vertical structure data, DGVM modelers are now revisiting albedo simulation. We present preliminary prognostic global land surface albedo produced by the Ent Terrestrial Biosphere Model (TBM), a DGVM coupled to the NASA Goddard Institute for Space Studies (GISS) GCM. The Ent TBM is a next generation DGVM designed to incorporate variation in canopy heights, and mixed and sparse canopies. For such dynamically varying canopy structure, it uses the Analytical Clumped Two-Stream (ACTS) canopy radiative transfer model, which is derived from gap probability theory for canopies of tree cohorts with ellipsoidal crowns, and accounts for soil, snow, and bare stems. We have developed a first-order global vegetation structure data set (GVSD), which gives a year of satellite-derived geographic variation in canopy height, maximum canopy leaf area, and seasonal LAI. Combined with Ent allometric relations, this data set provides population density and foliage clumping within crowns. We compare the Ent prognostic albedoes to those of the previous GISS GCM scheme, and to satellite estimates. The impact of albedo differences on surface

  16. Seeing the Fields and Forests: Application of Surface-Layer Theory and Flux-Tower Data to Calculating Vegetation Canopy Height

    Science.gov (United States)

    Pennypacker, Sam; Baldocchi, Dennis

    2016-02-01

    Canopy height is an important and dynamic site variable that affects the mass and energy exchanges between vegetation and the atmosphere. We develop a method to estimate canopy height routinely, using surface-layer theory and turbulence measurements made from a collection of flux towers. This tool is based on connecting the logarithmic wind profile generally expected in a neutral surface layer with direct measurements of friction velocity and assumptions about canopy height's relationships with zero-plane displacement and aerodynamic roughness length. Tests over a broad range of canopy types and heights find that calculated values are in good agreement with direct measurements of canopy height, including in a heterogeneous landscape. Based on the various uncertainties associated with our starting assumptions about canopy micrometeorology, we present a blueprint for future work that is necessary for expanding and improving these initial calculations.

  17. Discriminating Canopy Structural Types from Optical Properties using AVIRIS Data in the Sierra National Forest in Central California

    Science.gov (United States)

    Huesca Martinez, M.; Garcia, M.; Roth, K. L.; Casas, A.; Ustin, S.

    2015-12-01

    There is a well-established need within the remote sensing community for improved estimation of canopy structure and understanding of its influence on the retrieval of leaf biochemical properties. The aim of this project was to evaluate the estimation of structural properties directly from hyperspectral data, with the broader goal that these might be used to constrain retrievals of canopy chemistry. We used NASA's Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) to discriminate different canopy structural types, defined in terms of biomass, canopy height and vegetation complexity, and compared them to estimates of these properties measured by LiDAR data. We tested a large number of optical metrics, including single narrow band reflectance and 1st derivative, sub-pixel cover fractions, narrow-band indices, spectral absorption features, and Principal Component Analysis components. Canopy structural types were identified and classified from different forest types by integrating structural traits measured by optical metrics using the Random Forest (RF) classifier. The classification accuracy was above 70% in most of the vegetation scenarios. The best overall accuracy was achieved for hardwood forest (>80% accuracy) and the lowest accuracy was found in mixed forest (~70% accuracy). Furthermore, similarly high accuracy was found when the RF classifier was applied to a spatially independent dataset, showing significant portability for the method used. Results show that all spectral regions played a role in canopy structure assessment, thus the whole spectrum is required. Furthermore, optical metrics derived from AVIRIS proved to be a powerful technique for structural attribute mapping. This research illustrates the potential for using optical properties to distinguish several canopy structural types in different forest types, and these may be used to constrain quantitative measurements of absorbing properties in future research.

  18. Quantifying post-fire recovery of forest canopy structure and its environmental drivers using satellite image time-series

    Science.gov (United States)

    Khanal, Shiva; Duursma, Remko; Boer, Matthias

    2014-05-01

    Fire is a recurring disturbance in most of Australia's forests. Depending on fire severity, impacts on forest canopies vary from light scorching to complete defoliation, with related variation in the magnitude and duration of post-fire gas exchange by that canopy. Estimates of fire impacts on forest canopy structure and carbon uptake for south-eastern Australia's forests do not exist. Here, we use 8-day composite measurements of the fraction of Absorbed Photosynthetically Active radiation (FPAR) as recorded by the Moderate-resolution Imaging Spectroradiometer (MODIS) to characterise forest canopies before and after fire and to compare burnt and unburnt sites. FPAR is a key biophysical canopy variable and primary input for estimating Gross Primary Productivity (GPP). Post-fire FPAR loss was quantified for all forest areas burnt between 2001 and 2010, showing good agreement with independent assessments of fire severity patterns of 2009 Black Saturday fires. A new method was developed to determine the duration of post-fire recovery from MODIS-FPAR time-series. The method involves a spatial-mode principal component analysis on full FPAR time series followed by a K-means clustering to group pixels based on similarity in temporal patterns. Using fire history data, time series of FPAR for burnt and unburnt pixels in each cluster were then compared to quantify the duration of the post-fire recovery period, which ranged from less than 1 to 8 years. The results show that time series of MODIS FPAR are well suited to detect and quantify disturbances of forest canopy structure and function in large areas of highly variable climate and phenology. Finally, the role of post-fire climate conditions and previous fire history on the duration of the post-fire recovery of the forest canopy was examined using generalized additive models.

  19. Sensitivity of simulated terrestrial carbon assimilation and canopy transpiration to different stomatal conductance and carbon assimilation schemes

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Haishan [Nanjing University of Information Science and Technology, Key Laboratory of Meteorological Disaster of Ministry of Education, Nanjing (China); Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States); Dickinson, Robert E. [Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States); The University of Texas at Austin, Department of Geological Sciences, Austin, TX (United States); Dai, Yongjiu [Beijing Normal University, State Key Laboratory of Earth Surface Processes and Resource Ecology, School of Global Change and Earth System Science, Beijing (China); Zhou, Liming [Georgia Institute of Technology, School of Earth and Atmospheric Sciences, Atlanta, GA (United States)

    2011-03-15

    Accurate simulations of terrestrial carbon assimilation and canopy transpiration are needed for both climate modeling and vegetation dynamics. Coupled stomatal conductance and carbon assimilation (A - g{sub s}) models have been widely used as part of land surface parameterizations in climate models to describe the biogeophysical and biogeochemical roles of terrestrial vegetation. Differences in various A - g{sub s} schemes produce substantial differences in the estimation of carbon assimilation and canopy transpiration, as well as in other land-atmosphere fluxes. The terrestrial carbon assimilation and canopy transpiration simulated by two different representative A - g{sub s} schemes, a simple A-g{sub s} scheme adopted from the treatments of the NCAR model (Scheme I) and a two-big-leaf A - g{sub s} scheme newly developed by Dai et al. (J Clim 17:2281-2299, 2004) (Scheme II), are compared via some sensitivity experiments to investigate impacts of different A - g{sub s} schemes on the simulations. Major differences are found in the estimate of canopy carbon assimilation rate, canopy conductance and canopy transpiration between the two schemes, primarily due to differences in (a) functional forms used to estimate parameters for carbon assimilation sub-models, (b) co-limitation methods used to estimate carbon assimilation rate from the three limiting rates, and (c) leaf-to-canopy scaling schemes. On the whole, the differences in the scaling approach are the largest contributor to the simulation discrepancies, but the different methods of co-limitation of assimilation rate also impact the results. Except for a few biomes, the residual effects caused by the different parameter estimations in assimilation sub-models are relatively small. It is also noted that the two-leaf temperature scheme produces distinctly different sunlit and shaded leaf temperatures but has negligible impacts on the simulation of the carbon assimilation. (orig.)

  20. FLOW VELOCITY AND SURFACE TEMPERATURE EFFECTS ON CONVECTIVE HEAT TRANSFER COEFFICIENT FROM URBAN CANOPY SURFACES BY NUMERICAL SIMULATION

    Directory of Open Access Journals (Sweden)

    Sivaraja Subramania Pillai

    2013-01-01

    Full Text Available This study investigates the effect of flow velocity and building surface temperature effects on Convective Heat Transfer Coefficient (CHTC from urban building surfaces by numerical simulation. The thermal effects produced by geometrical and physical properties of urban areas generate a relatively differential heating and uncomfortable environment compared to rural regions called as Urban Heat Island (UHI phenomena. The urban thermal comfort is directly related to the CHTC from the urban canopy surfaces. This CHTC from urban canopy surfaces expected to depend upon the wind velocity flowing over the urban canopy surfaces, urban canopy configurations, building surface temperature etc. But the most influential parameter on CHTC has not been clarified yet. Urban canopy type experiments in thermally stratified wind tunnel have normally been used to study the heat transfer issues. But, it is not an easy task in wind tunnel experiments to evaluate local CHTC, which vary on individual canyon surfaces such as building roof, walls and ground. Numerical simulation validated by wind tunnel experiments can be an alternative for the prediction of CHTC from building surfaces in an urban area. In our study, wind tunnel experiments were conducted to validate the low-Reynolds-number k- ε model which was used for the evaluation of CHTC from surfaces. The calculated CFD results showed good agreement with experimental results. After this validation, the effects of flow velocity and building surface temperature effects on CHTC from urban building surfaces were investigated. It has been found that the change in velocity remarkably affects the CHTC from urban canopy surfaces and change in surface temperature has almost no effect over the CHTC from urban canopy surfaces.

  1. FLOW VELOCITY AND SURFACE TEMPERATURE EFFECTS ON CONVECTIVE HEAT TRANSFER COEFFICIENT FROM URBAN CANOPY SURFACES BY NUMERICAL SIMULATION

    Directory of Open Access Journals (Sweden)

    Sivaraja Subramania Pillai

    2013-06-01

    Full Text Available This study investigates the effect of flow velocity and building surface temperature effects on Convective Heat Transfer Coefficient (CHTC from urban building surfaces by numerical simulation. The thermal effects produced by geometrical and physical properties of urban areas generate a relatively differential heating and uncomfortable environment compared to rural regions called as Urban Heat Island (UHI phenomena. The urban thermal comfort is directly related to the CHTC from the urban canopy surfaces. This CHTC from urban canopy surfaces expected to depend upon the wind velocity flowing over the urban canopy surfaces, urban canopy configurations, building surface temperature etc. But the most influential parameter on CHTC has not been clarified yet. Urban canopy type experiments in thermally stratified wind tunnel have normally been used to study the heat transfer issues. But, it is not an easy task in wind tunnel experiments to evaluate local CHTC, which vary on individual canyon surfaces such as building roof, walls and ground. Numerical simulation validated by wind tunnel experiments can be an alternative for the prediction of CHTC from building surfaces in an urban area. In our study, wind tunnel experiments were conducted to validate the low-Reynolds-number k-ε model which was used for the evaluation of CHTC from surfaces. The calculated CFD results showed good agreement with experimental results. After this validation, the effects of flow velocity and building surface temperature effects on CHTC from urban building surfaces were investigated. It has been found that the change in velocity remarkably affects the CHTC from urban canopy surfaces and change in surface temperature has almost no effect over the CHTC from urban canopy surfaces.

  2. Estimation of canopy attributes in beech forests using true colour digital images from a small fixed-wing UAV

    Science.gov (United States)

    Chianucci, Francesco; Disperati, Leonardo; Guzzi, Donatella; Bianchini, Daniele; Nardino, Vanni; Lastri, Cinzia; Rindinella, Andrea; Corona, Piermaria

    2016-05-01

    Accurate estimates of forest canopy are essential for the characterization of forest ecosystems. Remotely-sensed techniques provide a unique way to obtain estimates over spatially extensive areas, but their application is limited by the spectral and temporal resolution available from these systems, which is often not suited to meet regional or local objectives. The use of unmanned aerial vehicles (UAV) as remote sensing platforms has recently gained increasing attention, but their applications in forestry are still at an experimental stage. In this study we described a methodology to obtain rapid and reliable estimates of forest canopy from a small UAV equipped with a commercial RGB camera. The red, green and blue digital numbers were converted to the green leaf algorithm (GLA) and to the CIE L*a*b* colour space to obtain estimates of canopy cover, foliage clumping and leaf area index (L) from aerial images. Canopy attributes were compared with in situ estimates obtained from two digital canopy photographic techniques (cover and fisheye photography). The method was tested in beech forests. UAV images accurately quantified canopy cover even in very dense stand conditions, despite a tendency to not detecting small within-crown gaps in aerial images, leading to a measurement of a quantity much closer to crown cover estimated from in situ cover photography. Estimates of L from UAV images significantly agreed with that obtained from fisheye images, but the accuracy of UAV estimates is influenced by the appropriate assumption of leaf angle distribution. We concluded that true colour UAV images can be effectively used to obtain rapid, cheap and meaningful estimates of forest canopy attributes at medium-large scales. UAV can combine the advantage of high resolution imagery with quick turnaround series, being therefore suitable for routine forest stand monitoring and real-time applications.

  3. Local flux-profile relationships of wind speed and temperature in a canopy layer in atmospheric stable conditions

    Science.gov (United States)

    Zhang, G.; Leclerc, M. Y.; Karipot, A.

    2010-11-01

    The particularities of the physics of the canopy layer pose challenges to the determination and use of traditional universal functions so helpful in the atmospheric surface layer. Progress toward "universal-like functions" such as those provided by Monin-Obukhov similarity theory for the canopy layer has been modest. One of the challenges lies in that the assumptions underlying Monin-Obukhov similarity theory do not hold within a canopy layer. This paper thus examines the local flux-profile relations for wind (Φm) and for temperature (Φh). It uses three different stability parameters, i.e., h/L(h) at tree top, local z/L(z), and the local bulk Richardson number (Ri), within a tall forest canopy in nighttime stable (indicated by h/L(h) > 0) conditions. Results suggest that the in-canopy Φm can be described using the local Richardson number Ri. Furthermore, Φm is found to increase linearly with Ri in the upper canopy layer for |Ri| 1, |Φm| decreases with |Ri| in a power function, a result consistent for all levels of measurements within the canopy. When both local Φh and local Ri are positive, i.e., the local downward turbulent heat flux is consistent with the local temperature gradient, the local Φh increases with the local Ri when Ri 1. The relationship between local Φh and Ri disappears when counter-gradient heat transfer occurs in strongly stable conditions. A self-correlation analysis is used to examine the influence of self-correlation and the physical meaning of these relationships.

  4. Optical Polarization of Light from a Sorghum Canopy Measured under both a Clear and an Overcast Sky

    Science.gov (United States)

    Vanderbilt, V. C.; Daughtry, C. S. T.; Biehl, L. L.; Dahlgren, R. P.

    2014-12-01

    Introduction:We tested the hypothesis that the optical polarization of the light reflected by a sorghum canopy is due to a Fresnel-type redirection, by sorghum leaf surfaces, of light from an unpolarized light source, the sun or overcast sky, toward the measuring sensor. If it can be shown that the source of the polarization of the light scattered by the sorghum canopy is a first surface, Fresnel-type reflection, then removing this surface reflected light from measurements of canopy reflectance presumably would allow better insight into the biochemical processes such as photosynthesis and metabolism that occur in the interiors of sorghum canopy leaves. Methods:We constructed a tower 5.9m tall in the center of a homogenous sorghum field. We equipped two Barnes MMR radiometers with polarization analyzers on the number 1, 3 and 7 Landsat TM wavelength bands. Positioning the radiometers atop the tower, we collected radiance data in 44 view directions on two days, one day with an overcast sky and the other, clear and sunlit. From the radiance data we calculated the linear polarization of the reflected light for each radiometer wavelength channel and view direction. Results and Discussion: Our experimental results support our hypothesis, showing that the amplitude of the linearly polarized portion of the light reflected by the sorghum canopy varied dramatically with view azimuth direction under a point source, the sun, but the amplitude varied little with view azimuth direction under the hemispherical source, the overcast sky. Under the clear sky, the angle of polarization depended upon the angle of incidence of the sunlight on the leaf, while under the overcast sky the angle of polarization depended upon the zenith view angle. These results support a polarized radiation transport model of the canopy that is based upon a first surface, Fresnel reflection from leaves in the sorghum canopy.

  5. Crown plasticity and competition for canopy space: a new spatially implicit model parameterized for 250 North American tree species.

    Directory of Open Access Journals (Sweden)

    Drew W Purves

    Full Text Available BACKGROUND: Canopy structure, which can be defined as the sum of the sizes, shapes and relative placements of the tree crowns in a forest stand, is central to all aspects of forest ecology. But there is no accepted method for deriving canopy structure from the sizes, species and biomechanical properties of the individual trees in a stand. Any such method must capture the fact that trees are highly plastic in their growth, forming tessellating crown shapes that fill all or most of the canopy space. METHODOLOGY/PRINCIPAL FINDINGS: We introduce a new, simple and rapidly-implemented model--the Ideal Tree Distribution, ITD--with tree form (height allometry and crown shape, growth plasticity, and space-filling, at its core. The ITD predicts the canopy status (in or out of canopy, crown depth, and total and exposed crown area of the trees in a stand, given their species, sizes and potential crown shapes. We use maximum likelihood methods, in conjunction with data from over 100,000 trees taken from forests across the coterminous US, to estimate ITD model parameters for 250 North American tree species. With only two free parameters per species--one aggregate parameter to describe crown shape, and one parameter to set the so-called depth bias--the model captures between-species patterns in average canopy status, crown radius, and crown depth, and within-species means of these metrics vs stem diameter. The model also predicts much of the variation in these metrics for a tree of a given species and size, resulting solely from deterministic responses to variation in stand structure. CONCLUSIONS/SIGNIFICANCE: This new model, with parameters for US tree species, opens up new possibilities for understanding and modeling forest dynamics at local and regional scales, and may provide a new way to interpret remote sensing data of forest canopies, including LIDAR and aerial photography.

  6. Bundle Sheath Leakiness and Light Limitation during C4 Leaf and Canopy CO2 Uptake1[W][OA

    Science.gov (United States)

    Kromdijk, Johannes; Schepers, Hans E.; Albanito, Fabrizio; Fitton, Nuala; Carroll, Faye; Jones, Michael B.; Finnan, John; Lanigan, Gary J.; Griffiths, Howard

    2008-01-01

    Perennial species with the C4 pathway hold promise for biomass-based energy sources. We have explored the extent that CO2 uptake of such species may be limited by light in a temperate climate. One energetic cost of the C4 pathway is the leakiness (φ) of bundle sheath tissues, whereby a variable proportion of the CO2, concentrated in bundle sheath cells, retrodiffuses back to the mesophyll. In this study, we scale φ from leaf to canopy level of a Miscanthus crop (Miscanthus × giganteus hybrid) under field conditions and model the likely limitations to CO2 fixation. At the leaf level, measurements of photosynthesis coupled to online carbon isotope discrimination showed that leaves within a 3.3-m canopy (leaf area index = 8.3) show a progressive increase in both carbon isotope discrimination and φ as light decreases. A similar increase was observed at the ecosystem scale when we used eddy covariance net ecosystem CO2 fluxes, together with isotopic profiles, to partition photosynthetic and respiratory isotopic flux densities (isofluxes) and derive canopy carbon isotope discrimination as an integrated proxy for φ at the canopy level. Modeled values of canopy CO2 fixation using leaf-level measurements of φ suggest that around 32% of potential photosynthetic carbon gain is lost due to light limitation, whereas using φ determined independently from isofluxes at the canopy level the reduction in canopy CO2 uptake is estimated at 14%. Based on these results, we identify φ as an important limitation to CO2 uptake of crops with the C4 pathway. PMID:18971428

  7. Effect of canopy structures and their steric interactions on CO2 sorption behavior of liquid-like nanoparticle organic hybrid materials

    KAUST Repository

    Park, Youngjune

    2014-01-01

    Liquid-like NOHMs with different grafting densities of polymeric canopy were synthesized to evaluate their solvating properties as CO2 solvents. The in situ ATR FT-IR study of NOHMs with linear and branched canopies revealed distinct CO2 capture and corresponding swelling behaviors. These observations suggested that the entropic contribution for CO2 sorption in NOHMs can be tuned via the canopy design. © The Royal Society of Chemistry.

  8. Evaluating radiative transfer schemes treatment of vegetation canopy architecture in land surface models

    Science.gov (United States)

    Braghiere, Renato; Quaife, Tristan; Black, Emily

    2016-04-01

    Incoming shortwave radiation is the primary source of energy driving the majority of the Earth's climate system. The partitioning of shortwave radiation by vegetation into absorbed, reflected, and transmitted terms is important for most of biogeophysical processes, including leaf temperature changes and photosynthesis, and it is currently calculated by most of land surface schemes (LSS) of climate and/or numerical weather prediction models. The most commonly used radiative transfer scheme in LSS is the two-stream approximation, however it does not explicitly account for vegetation architectural effects on shortwave radiation partitioning. Detailed three-dimensional (3D) canopy radiative transfer schemes have been developed, but they are too computationally expensive to address large-scale related studies over long time periods. Using a straightforward one-dimensional (1D) parameterisation proposed by Pinty et al. (2006), we modified a two-stream radiative transfer scheme by including a simple function of Sun zenith angle, so-called "structure factor", which does not require an explicit description and understanding of the complex phenomena arising from the presence of vegetation heterogeneous architecture, and it guarantees accurate simulations of the radiative balance consistently with 3D representations. In order to evaluate the ability of the proposed parameterisation in accurately represent the radiative balance of more complex 3D schemes, a comparison between the modified two-stream approximation with the "structure factor" parameterisation and state-of-art 3D radiative transfer schemes was conducted, following a set of virtual scenarios described in the RAMI4PILPS experiment. These experiments have been evaluating the radiative balance of several models under perfectly controlled conditions in order to eliminate uncertainties arising from an incomplete or erroneous knowledge of the structural, spectral and illumination related canopy characteristics typical

  9. Comparison of vertical resolved leaf area index measurements in an open canopy savannah-type forest

    Science.gov (United States)

    Piayda, Arndt; Cuntz, Matthias; Dubbert, Maren; Werner, Christiane; Pereira, Joao S.

    2013-04-01

    Leaf area index (LAI) is a very important vegetation parameter in soil-vegetation-atmosphere exchange modeling. To represent the structure of ecosystems in vertically distributed modeling, vertical resolved LAI distributions as well as vertically and angular gap fraction (Pgap) distributions are needed, but rarely available. Additionally, former studies neglect woody plant components when using light interception or digital photography based methods for LAI or Pgap observations. This can lead to significantly biased results, particularly in semi-arid savannah-type ecosystems with low LAI values. The objective of this study is to compare three non-destructive LAI measurement techniques in a sparse savannah-type cork oak canopy in central Portugal in order to derive vertically resolved LAI as well as vertically and angular resolved Pgap. Since established canopy analyzers, such as the LAI-2000, rely on diffuse light conditions, which are rarely realized in semi-arid regions, we also employed fast, digital cover photography (DCP) working independently from diffuse light conditions. We used vertical and angular distributed DCP and applied object-based image analysis techniques to exclude woody plant components from Pgap estimation and LAI determination. We compared the results with vertically distributed LAI-2000 measurements, and additionally with vertical estimates based on easily measurable forest canopy parameters. We employed bootstrap resampling methods to determine the accuracy of all measurements depending on sample size. Leaf inclination measurements indicate planophile leaf orientation. Thus LAI was calculated with Pgap and the leaf inclination information. This led to a spatial averaged LAI of 0.52 +- 0.06 for DCP while LAI-2000 measurements resulted in 0.67 +- 0.07. Uncertainty bounds of LAI converge much faster with increasing sample size for the DCP than for the LAI-2000. This allows a more efficient sampling design, which is of great importance in

  10. Adapting a regularized canopy reflectance model (REGFLEC) for the retrieval challenges of dryland agricultural systems

    KAUST Repository

    Houborg, Rasmus

    2016-08-20

    A regularized canopy reflectance model (REGFLEC) is applied over a dryland irrigated agricultural system in Saudi Arabia for the purpose of retrieving leaf area index (LAI) and leaf chlorophyll content (Chll). To improve the robustness of the retrieved properties, REGFLEC was modified to 1) correct for aerosol and adjacency effects, 2) consider foliar dust effects on modeled canopy reflectances, 3) include spectral information in the red-edge wavelength region, and 4) exploit empirical LAI estimates in the model inversion. Using multi-spectral RapidEye imagery allowed Chll to be retrieved with a Mean Absolute Deviation (MAD) of 7.9 μg cm− 2 (16%), based upon in-situ measurements conducted in fields of alfalfa, Rhodes grass and maize over the course of a growing season. LAI and Chll compensation effects on canopy reflectance were largely avoided by informing the inversion process with ancillary LAI inputs established empirically on the basis of a statistical machine learning technique. As a result, LAI was reproduced with good accuracy, with an overall MAD of 0.42 m2 m− 2 (12.5%). Results highlighted the considerable challenges associated with the translation of at-sensor radiance observations to surface bidirectional reflectances in dryland environments, where issues such as high aerosol loadings and large spatial gradients in surface reflectance from bright desert soils to dark vegetated fields are often present. Indeed, surface reflectances in the visible bands were reduced by up to 60% after correction for such adjacency effects. In addition, dust deposition on leaves required explicit modification of the reflectance sub-model to account for its influence. By implementing these model refinements, REGFLEC demonstrated its utility for within-field characterization of vegetation conditions over the challenging landscapes typical of dryland agricultural regions, offering a means through which improvements can be made in the management of these globally

  11. Pose parameter extraction of corn canopy remote sensing images based on parallel multi-ocular imaging

    Science.gov (United States)

    Li, Xin; Zhang, Yan'e.; Zhu, Jingfu; Zhao, Ruijiao; Li, Minzan

    2010-11-01

    A 3-dimensional reconstruction model and pose parameter extracting method of parallel multi-ocular image are proposed. The multi-spectral camera is arranged as a rectangle with four channels of R, G, B and NIR. The corn canopy images in field are captured by the camera, and the distance from the camera to the corn canopy is about 0.5m. A novel matching method of feature point is proposed. Channel NIR is taken as the source, and the others are taken as destination. And then the edge of the corn leaf in source image is taken as the source feature points. Feature vector of each point is composed of its 18 directional derivatives. After that, the destination feature point is searched in destination image. First, the local area is estimated where the feature points may lie on. Then, if the intersection angle of two edges, formed by local points and source points, is smaller than a threshold, and the Euclidean distance between feature vectors of local points and source points is minimum among all of them, the local points are thought to match destination feature points, and the feature points pair set is constructed. The edge direction and distance are used as the principle to divide the different area of the image, so that the different leaf regions of canopy image are segmented. The 3-dimensional coordinate of each point in the region can be calculated. From four channel images, at least three 3-dimensional coordinates of each point can attained, and the center of gravity is the more accurately 3-dimensional coordinate. The interpolation is used to reconstruct corn leaf in space, and the pose parameters such as inclination of leaf and so on are estimated.

  12. Dissipation Intermittency Increases Long-Distance Dispersal of Heavy Particles in the Canopy Sublayer

    Science.gov (United States)

    Duman, Tomer; Trakhtenbrot, Ana; Poggi, Davide; Cassiani, Massimo; Katul, Gabriel G.

    2016-04-01

    The dispersion of heavy particles such as seeds within canopies is evaluated using Lagrangian stochastic trajectory models, laboratory, and field experiments. Inclusion of turbulent kinetic energy dissipation rate intermittency is shown to increase long-distance dispersal (LDD) by contributing to the intermittent ejection of particles to regions of high mean velocity outside the canopy volume. Model evaluation against controlled flume experiments, featuring a dense rod canopy, detailed flow measurements, and imaged trajectories of spherical particles, demonstrates that superimposing a terminal velocity on the fluid velocity is insufficient to determine the particle dispersal kernel. Modifying the trajectory model by adding dissipation intermittency is found to be significant for dispersal predictions along with the addition of inertial and crossing trajectories' effects. Comparison with manual seed-release experiments in a forest using wind-dispersed seeds shows that the model captures most of the measured kernels when accepted uncertainties in plant area index and friction velocity are considered. Unlike the flume experiments, the model modifications for several wind-dispersed seeds have minor effects on short-distance dispersal. A large increase was predicted in LDD when including dissipation intermittency for the forest experiment. The main results suggest that fitting or calibrating models to the `main body' of measured kernels may not offer extrapolating foresight to LDD predictions. As inertial effects were found mostly negligible in the field conditions here, the extended trajectory model requires specifying only the seed's terminal velocity and a constant variance of the normalized dissipation rate. Therefore, the proposed modifications can be readily applied to classical trajectory models so as to improve LDD predictions.

  13. AREA-BASED SNOW DAMAGE CLASSIFICATION OF FOREST CANOPIES USING BI- TEMPORAL LIDAR DATA

    Directory of Open Access Journals (Sweden)

    M. Vastaranta

    2012-09-01

    Full Text Available Multitemporal LiDAR data provide means for mapping structural changes in forest canopies. We demonstrate the use of area-based estimation method for snow damage assessment. Change features of bi-temporal LiDAR point height distributions were used as predictors in combination with in situ training data. In the winter 2009–2010, snow damages occurred in Hyytiälä (62°N, 24°E, southern Finland. Snow load resulted in broken, bent and fallen trees changing the canopy structure. The damages were documented at the tree level at permanent field plots and dense LiDAR data from 2007 and 2010 were used in the analyses. A 5 × 5-m grid was established in one pine%ndash;spruce stand and change metrics from the LiDAR point height distribution were extracted for the cells. Cells were classified as damaged (n = 43 or undamaged (n = 42 based on the field data. Stepwise logistic regression detected the damaged cells with an overall accuracy of 78.6% (Kappa = 0.57. The best predictors were differences in h-distribution percentage points 5, 35, 40, 50 and 70 of first-or-single return data. The tentative results from the single stand suggest that dense bi-temporal LiDAR data and an area-based approach could be feasible in mapping canopy changes. The accuracy of the point h-distribution is dependent on the pulse density per grid cell. Depending on the time span between LiDAR acquisitions, the natural changes of the h- distributions due to tree growth need to be accounted for as well as differences in the scanning geometry, which can substantially affect the LiDAR h-metrics.

  14. Impact of Photovoltaic Canopy Shade on Outdoor Thermal Comfort in a Hot Desert City

    Science.gov (United States)

    Middel, Ariane; Selover, Nancy; Hagen, Björn; Chhetri, Nalini

    2016-04-01

    Shade plays an important role in designing pedestrian-friendly outdoor spaces in hot desert cities. This study investigates the impact of photovoltaic canopy shade on thermal comfort through microclimate observations and field surveys at a pedestrian mall on Arizona State University's Tempe campus. Six stationary sensors under solar canopies and in nearby sun-exposed and tree-shaded locations monitored 5-min temperature and humidity for a year. On selected clear calm days representative of each season, we conducted hourly microclimate transects from 7:00AM to 6:00PM and surveyed 1284 people about their thermal perception, comfort, and preferences. Shade lowered thermal sensation votes by approximately 1 point on the Likert scale, increasing thermal comfort in all seasons except winter. The shade type (tree or solar canopy) did not significantly impact perceived comfort, suggesting that artificial and natural shade are equally efficient in semi-arid desert environments. Globe temperature explained 50% of the variance in thermal sensation votes and was the only statistically significant meteorological predictor. Important non-meteorological factors include adaptation level, gender, thermal comfort vote, thermal preference, season, and time of day. A regression of perceived comfort on Physiological Equivalent Temperature yielded a neutral temperature of 28.6°C. The acceptable comfort range was 19.1°C-38.1°C with a preferred temperature of 20.8°C. Respondents exposed to above neutral temperatures felt more comfortable if they had been in air-conditioning 5 minutes prior to the survey, indicating a lagged response to outdoor conditions. Our study highlights the importance of active solar access management in hot urban areas.

  15. Tree Canopy Cover Mapping Using LiDAR in Urban Barangays of Cebu City, Central Philippines

    Science.gov (United States)

    Ejares, J. A.; Violanda, R. R.; Diola, A. G.; Dy, D. T.; Otadoy, J. B.; Otadoy, R. E. S.

    2016-06-01

    This paper investigates tree canopy cover mapping of urban barangays (smallest administrative division in the Philippines) in Cebu City using LiDAR (Light Detection and Ranging). Object-Based Image Analysis (OBIA) was used to extract tree canopy cover. Multi-resolution segmentation and a series of assign-class algorithm in eCognition software was also performed to extract different land features. Contextual features of tree canopies such as height, area, roundness, slope, length-width and elliptic fit were also evaluated. The results showed that at the time the LiDAR data was collected (June 24, 2014), the tree cover was around 25.11 % (or 15,674,341.8 m2) of the city's urban barangays (or 62,426,064.6 m2). Among all urban barangays in Cebu City, Barangay Busay had the highest cover (55.79 %) while barangay Suba had the lowest (0.8 %). The 16 barangays with less than 10 % tree cover were generally located in the coastal area, presumably due to accelerated urbanization. Thirty-one barangays have tree cover ranging from 10.59--27.3 %. Only 3 barangays (i.e., Lahug, Talamban, and Busay) have tree cover greater than 30 %. The overall accuracy of the analysis was 96.6 % with the Kappa Index of Agreement or KIA of 0.9. From the study, a grouping can be made of the city's urban barangays with regards to tree cover. The grouping will be useful to urban planners not only in allocating budget to the tree planting program of the city but also in planning and creation of urban parks and playgrounds.

  16. Study on Effects of Building Morphology on Urban Boundary Layer Using an Urban Canopy Model

    Institute of Scientific and Technical Information of China (English)

    ZHOU Rongwei; JIANG Weimei; HE Xiaofeng; LIU Gang

    2009-01-01

    An urban canopy model is incorporated into the Nanjing University Regional Boundary Layer Model. Temperature simulated by the urban canopy model is in better agreement with the observation, especially in the night time, than that simulated by the traditional slab model. The coupled model is used to study the effects of building morphology on urban boundary layer and meteorological environment by changing urban area, building height, and building density.It is found that when the urban area is expanded, the urban boundary layer heat flux, thermal turbulence, and the turbulent momentum flux and kinetic energy all increase or enhance, causing the surface air temperature to rise up. The stability of urban atmospheric stratification is affected to different extent at different times of the day.When the building height goes up, the aerodynamic roughness height, zero plane displacement height of urban area, and ratio of building height to street width all increase. Therefore, the increase in building height results in the decrease of the surface heat flux, urban surface temperature, mean wind speed, and turbulent kinetic energy in daytime. While at night, as more heat storage is released by higher buildings, thermal turbulence is more active and surface heat flux increases, leading to a higher urban temperature.As the building density increases, the aerodynamic roughness height of urban area decreases, and the effect of urban canopy on radiation strengthens. The increase of building density results in the decrease in urban surface heat flux, momentum flux, and air temperature, the increase in mean wind speed, and the weakening of turbulence in the daytime. While at night, the urban temperature increases due to the release of more heat storage.

  17. TREE CANOPY COVER MAPPING USING LiDAR IN URBAN BARANGAYS OF CEBU CITY, CENTRAL PHILIPPINES

    Directory of Open Access Journals (Sweden)

    J. A. Ejares

    2016-06-01

    Full Text Available This paper investigates tree canopy cover mapping of urban barangays (smallest administrative division in the Philippines in Cebu City using LiDAR (Light Detection and Ranging. Object-Based Image Analysis (OBIA was used to extract tree canopy cover. Multi-resolution segmentation and a series of assign-class algorithm in eCognition software was also performed to extract different land features. Contextual features of tree canopies such as height, area, roundness, slope, length-width and elliptic fit were also evaluated. The results showed that at the time the LiDAR data was collected (June 24, 2014, the tree cover was around 25.11 % (or 15,674,341.8 m2 of the city’s urban barangays (or 62,426,064.6 m2. Among all urban barangays in Cebu City, Barangay Busay had the highest cover (55.79 % while barangay Suba had the lowest (0.8 %. The 16 barangays with less than 10 % tree cover were generally located in the coastal area, presumably due to accelerated urbanization. Thirty-one barangays have tree cover ranging from 10.59–-27.3 %. Only 3 barangays (i.e., Lahug, Talamban, and Busay have tree cover greater than 30 %. The overall accuracy of the analysis was 96.6 % with the Kappa Index of Agreement or KIA of 0.9. From the study, a grouping can be made of the city’s urban barangays with regards to tree cover. The grouping will be useful to urban planners not only in allocating budget to the tree planting program of the city but also in planning and creation of urban parks and playgrounds.

  18. Mangrove Canopy Height and Biomass Estimations by means of Pol-InSAR Techniques

    Science.gov (United States)

    Lee, S. K.; Fatoyinbo, T. E.; Trettin, C.; Simard, M.; Bandeira, S.

    2014-12-01

    Mangrove forests cover only about 1% of the Earth's terrestrial surface, but they are amongst the highest carbon-storing and carbon-exporting ecosystems globally. Estimating 3-D mangrove forest parameters has been challenging due to the complex physical environment of the forests. In previous works, remote sensing techniques have proven an excellent tool for the estimation of mangrove forests. Recent experiments have successfully demonstrated the global scale estimation of mangrove structure using spaceborne remote sensing data: SRTM (InSAR), ICESat/GLAS (lidar), Landsat ETM+ (passive optical). However, those systems had relatively low spatial and temporal resolutions. Polarimetric SAR Interferometry (Pol-InSAR) is a Synthetic Aperture Radar (SAR) remote sensing technique based on the coherent combination of both Polarimetric and interferometric observables. The Pol-InSAR has provided a step forward in quantitative 3D forest structure parameter estimation (e.g. forest canopy height and biomass) over a variety of forests. Recent developments of Pol-InSAR technique with TanDEM-X (TDX) data in mangroves have proven that TDX data can be used to produce global-scale mangrove canopy height and biomass maps at accuracies comparable to airborne lidar measurements. In this study we propose to generate 12m-resolution mangrove canopy height and biomass estimates for the coastline of Mozambique using Pol-InSAR techniques from single-/dual-pol TDX data and validated with commercial airborne lidar. To cover all of the mangroves in the costal area of Mozambique, which is about 3000 km, about 200 TDX data sets are selected and processed. The TDX height data are calibrated with commercial airborne lidar data acquired over 150 km2 of mangroves in the Zambezi delta of Mozambique while height and Biomass estimates are validated using in-situ forest inventory measurements and biomass. The results from the study will be the first country-wide, wall-to-wall estimate of mangrove structure

  19. Assessing and Correcting Topographic Effects on Forest Canopy Height Retrieval Using Airborne LiDAR Data

    Directory of Open Access Journals (Sweden)

    Zhugeng Duan

    2015-05-01

    Full Text Available Topography affects forest canopy height retrieval based on airborne Light Detection and Ranging (LiDAR data a lot. This paper proposes a method for correcting deviations caused by topography based on individual tree crown segmentation. The point cloud of an individual tree was extracted according to crown boundaries of isolated individual trees from digital orthophoto maps (DOMs. Normalized canopy height was calculated by subtracting the elevation of centres of gravity from the elevation of point cloud. First, individual tree crown boundaries are obtained by carrying out segmentation on the DOM. Second, point clouds of the individual trees are extracted based on the boundaries. Third, precise DEM is derived from the point cloud which is classified by a multi-scale curvature classification algorithm. Finally, a height weighted correction method is applied to correct the topological effects. The method is applied to LiDAR data acquired in South China, and its effectiveness is tested using 41 field survey plots. The results show that the terrain impacts the canopy height of individual trees in that the downslope side of the tree trunk is elevated and the upslope side is depressed. This further affects the extraction of the location and crown of individual trees. A strong correlation was detected between the slope gradient and the proportions of returns with height differences more than 0.3, 0.5 and 0.8 m in the total returns, with coefficient of determination R2 of 0.83, 0.76, and 0.60 (n = 41, respectively.

  20. Canopy interactions of rainfall in an off-shore mangrove ecosystem dominated by Rhizophora mangle (Belize)

    Science.gov (United States)

    Wanek, Wolfgang; Hofmann, Julia; Feller, Ilka C.

    2007-10-01

    SummaryBulk precipitation, throughfall and stemflow were collected to study anthropogenic effects on above-ground nutrient cycling in an off-shore mangrove forest ( Rhizophora mangle L.) on Twin Cays, Belize. Samples were collected in a nitrogen limited fringe and phosphorus limited dwarf zone, and from an adjacent nitrogen fertilized fringe and a phosphorus fertilized dwarf zone. Inorganic cations and anions, dissolved organic carbon (DOC) and nitrogen (DON) were analysed. Throughfall represented 84% of precipitation volume. Sea salt ions (Cl -, Na +, SO42- and Mg 2+) and DOC accounted for the highest proportion of solutes in rainwater, throughfall and stemflow in R. mangle stands. Non-marine sources dominated the flux of DON, DOC, NO3-, NH4+, and inorganic P (P i) in bulk precipitation and throughfall and partially contributed to Ca 2+ and K +. Deposition ratios (throughfall deposition:bulk deposition) showed that inorganic NH4+, and less so P i were retained in the canopy of R. mangle from throughfall while all other solutes increased. Canopy leaching contributed in increasing order to net throughfall of Ca 2+, Cl -, SO42-/K, Mg 2+ and Na + but dry deposition dominated the net throughfall flux during the investigated period. Fertilizer treatment and zone did only slightly affect solute concentrations of hot-water extracts of leaves, of throughfall and stemflow in stands of similar stature. While litterfall and primary production have previously been shown to increase substantially upon nutrient enrichment of mangroves we therefore conclude that fertilization, as a surrogate of anthropogenic eutrophication, may not increase nutrient leaching from mangrove canopies, and thus may only have a minor effect on soluble organic matter cycling and inputs into mangrove food webs.

  1. The "Flood of the Century" as Isotopic Fingerprint in Canopy d18O Signatures

    Science.gov (United States)

    Seibt, U.; Wingate, L.; Berry, J. A.

    2006-12-01

    The d18O composition of water and CO2 exchange at smaller scales (leaf and ecosystem) can be affected by changes in environmental conditions at larger (regional) scales. During a sampling campaign in a beech forest in Germany in August 2002, we encountered such a large scale change when dry sunny weather was followed by a large storm system with heavy rains leading to floods across Europe. During the first, sunny period, bulk leaf water d18O was -1 permil at night and 7 permil at mid-day. Foliage CO2 exchange had positive values of 18O discrimination during photosynthesis (10-30 permil) and nocturnal respiration (11 permil). The second period had frequent rains and mostly diffuse light, with reduced foliage water fluxes but similar carbon fluxes. Canopy vapour d18O decreased at least 2 permil, and leaf water then reflected isotopic exchange with this depleted vapour due to the high humidity. Hence, bulk leaf water was substantially more depleted at night (-8 permil) and showed virtually no evaporative enrichment during the day (-5 permil). Values of 18O discrimination during CO2 exchange were small or even negative for photosynthesis (-2 to 6 permil) but larger for nocturnal respiration (23-39 permil). Model simulations indicated that the small positive foliage isoflux during the day was offset by the negative isoflux at night. As a consequence, the d18O of CO2 in canopy air decreased from -0.3 permil during the sunny period to -3 permil during the wet period. The d18O signatures of canopy water and CO2 thus reflected the transition from local water to the regional regime of depleted water deposited across the area by the storm.

  2. Mechanistic study of aerosol dry deposition on vegetated canopies; Etude mecaniste du depot sec d'aerosols sur les couverts vegetaux

    Energy Technology Data Exchange (ETDEWEB)

    Petroff, A

    2005-04-15

    The dry deposition of aerosols onto vegetated canopies is modelled through a mechanistic approach. The interaction between aerosols and vegetation is first formulated by using a set of parameters, which are defined at the local scale of one surface. The overall deposition is then deduced at the canopy scale through an up-scaling procedure based on the statistic distribution parameters. This model takes into account the canopy structural and morphological properties, and the main characteristics of the turbulent flow. Deposition mechanisms considered are Brownian diffusion, interception, initial and turbulent impaction, initially with coniferous branches and then with entire canopies of different roughness, such as grass, crop field and forest. (author)

  3. A specific PFT and sub-canopy structure for simulating oil palm in the Community Land Model

    Science.gov (United States)

    Fan, Y.; Knohl, A.; Roupsard, O.; Bernoux, M.; LE Maire, G.; Panferov, O.; Kotowska, M.; Meijide, A.

    2015-12-01

    Towards an effort to quantify the effects of rainforests to oil palm conversion on land-atmosphere carbon, water and energy fluxes, a specific plant functional type (PFT) and sub-canopy structure are developed for simulating oil palm within the Community Land Model (CLM4.5). Current global land surface models only simulate annual crops beside natural vegetation. In this study, a multilayer oil palm subroutine is developed in CLM4.5 for simulating oil palm's phenology and carbon and nitrogen allocation. The oil palm has monopodial morphology and sequential phenology of around 40 stacked phytomers, each carrying a large leaf and a fruit bunch, forming a natural multilayer canopy. A sub-canopy phenological and physiological parameterization is thus introduced, so that multiple phytomer components develop simultaneously but according to their different phenological steps (growth, yield and senescence) at different canopy layers. This specific multilayer structure was proved useful for simulating canopy development in terms of leaf area index (LAI) and fruit yield in terms of carbon and nitrogen outputs in Jambi, Sumatra (Fan et al. 2015). The study supports that species-specific traits, such as palm's monopodial morphology and sequential phenology, are necessary representations in terrestrial biosphere models in order to accurately simulate vegetation dynamics and feedbacks to climate. Further, oil palm's multilayer structure allows adding all canopy-level calculations of radiation, photosynthesis, stomatal conductance and respiration, beside phenology, also to the sub-canopy level, so as to eliminate scale mismatch problem among different processes. A series of adaptations are made to the CLM model. Initial results show that the adapted multilayer radiative transfer scheme and the explicit represention of oil palm's canopy structure improve on simulating photosynthesis-light response curve. The explicit photosynthesis and dynamic leaf nitrogen calculations per canopy

  4. Variation in foliar respiration and wood CO2 efflux rates among species and canopy layers in a wet tropical forest.

    Science.gov (United States)

    Asao, Shinichi; Bedoya-Arrieta, Ricardo; Ryan, Michael G

    2015-02-01

    As tropical forests respond to environmental change, autotrophic respiration may consume a greater proportion of carbon fixed in photosynthesis at the expense of growth, potentially turning the forests into a carbon source. Predicting such a response requires that we measure and place autotrophic respiration in a complete carbon budget, but extrapolating measurements of autotrophic respiration from chambers to ecosystem remains a challenge. High plant species diversity and complex canopy structure may cause respiration rates to vary and measurements that do not account for this complexity may introduce bias in extrapolation more detrimental than uncertainty. Using experimental plantations of four native tree species with two canopy layers, we examined whether species and canopy layers vary in foliar respiration and wood CO2 efflux and whether the variation relates to commonly used scalars of mass, nitrogen (N), photosynthetic capacity and wood size. Foliar respiration rate varied threefold between canopy layers, ∼0.74 μmol m(-2) s(-1) in the overstory and ∼0.25 μmol m(-2) s(-1) in the understory, but little among species. Leaf mass per area, N and photosynthetic capacity explained some of the variation, but height explained more. Chamber measurements of foliar respiration thus can be extrapolated to the canopy with rates and leaf area specific to each canopy layer or height class. If area-based rates are sampled across canopy layers, the area-based rate may be regressed against leaf mass per area to derive the slope (per mass rate) to extrapolate to the canopy using the total leaf mass. Wood CO2 efflux varied 1.0-1.6 μmol m(-2) s(-1) for overstory trees and 0.6-0.9 μmol m(-2) s(-1) for understory species. The variation in wood CO2 efflux rate was mostly related to wood size, and little to species, canopy layer or height. Mean wood CO2 efflux rate per surface area, derived by regressing CO2 efflux per mass against the ratio of surface

  5. Plot-level aboveground woody biomass modeling using canopy height and auxiliary remote sensing data in a heterogeneous savanna

    Science.gov (United States)

    Gwenzi, David; Lefsky, Michael Andrew

    2016-01-01

    Remote sensing studies aiming at assessing woody biomass have demonstrated a strong relationship between canopy height and plot-level aboveground biomass, but most of these studies focused on closed canopy forests. To date, a few studies have examined the strength and reliability of this relationship using large footprint lidar in savannas. Furthermore, there have been few studies of appropriate methods for the comparison of models that relate aboveground biomass to canopy height metrics without consideration of variation in species composition (generic models) to models developed for individual species composition or vegetation types. We developed generic models using the classical least-squares regression modeling approach to relate selected canopy height metrics to aboveground woody biomass in a savanna landscape. Hierarchical Bayesian analysis (HBA) was then used to explore the implications of using generic or composition-specific models. Our study used the estimates of aboveground biomass from field data, canopy height estimates from airborne discrete return lidar, and a proxy for canopy cover (the Normalized Difference Vegetation Index) from Landsat 5 Thematic Mapper data, collected from the oak savannas of Tejon Ranch Conservancy in Kern County, California. Models were developed and analyzed using estimates of canopy height and aboveground biomass calculated at the level of 50-m diameter plots, comparable with footprint diameter of existing large footprint spaceborne lidar data. The two generic models that incorporated canopy cover proxies performed better than one model that did not use canopy cover information. From the HBA, we found out that for all models both the intercept and slope had interspecific variability. The valley oak dominated plots consistently had higher slopes and intercepts, whereas the plots dominated by blue oaks had the lowest. However, the intercept and slope values of the composition-specific models did not differ much from the

  6. Estimating the influence of different urban canopy cover types on atmospheric particulate matter (PM10) pollution abatement in London UK.

    Science.gov (United States)

    Tallis, Matthew; Freer-Smith, Peter; Sinnett, Danielle; Aylott, Matthew; Taylor, Gail

    2010-05-01

    In the urban environment atmospheric pollution by PM10 (particulate matter with a diameter less than 10 x 10-6 m) is a problem that can have adverse effects on human health, particularly increasing rates of respiratory disease. The main contributors to atmospheric PM10 in the urban environment are road traffic, industry and power production. The urban tree canopy is a receptor for removing PM10s from the atmosphere due to the large surface areas generated by leaves and air turbulence created by the structure of the urban forest. In this context urban greening has long been known as a mechanism to contribute towards PM10 removal from the air, furthermore, tree canopy cover has a role in contributing towards a more sustainable urban environment. The work reported here has been carried out within the BRIDGE project (SustainaBle uRban plannIng Decision support accountinG for urban mEtabolism). The aim of this project is to assess the fluxes of energy, water, carbon dioxide and particulates within the urban environment and develope a DSS (Decision Support System) to aid urban planners in sustainable development. A combination of published urban canopy cover data from ground, airborne and satellite based surveys was used. For each of the 33 London boroughs the urban canopy was classified to three groups, urban woodland, street trees and garden trees and each group quantified in terms of ground cover. The total [PM10] for each borough was taken from the LAEI (London Atmospheric Emissions Inventory 2006) and the contribution to reducing [PM10] was assessed for each canopy type. Deposition to the urban canopy was assessed using the UFORE (Urban Forest Effects Model) approach. Deposition to the canopy, boundary layer height and percentage reduction of the [PM10] in the atmosphere was assessed using both hourly meterological data and [PM10] and seasonal data derived from annual models. Results from hourly and annual data were compared with measured values. The model was then

  7. Slow recovery from disturbance: a 20 year study of Ascophyllum canopy clearances

    OpenAIRE

    A. Ingólfsson; Hawkins, S.J.

    2008-01-01

    We describe an experiment where Ascophyllym nodosum was removed from two 1 x 1 m plots in south-western Iceland in August 1985. The plots were studied regularly until 2005. Recovery of the Ascophyllum canopy took 7–8 years. The understorey algae in one of the plots consisted mostly of extensive growth of Cladophora rupestris, which died within a year of Ascophyllum clearance. No Cladophora had reappeared by 2005, although it was healthy and abundant in control plots throughout the study perio...

  8. Rainfall interception in a lower montane forest in Ecuador: effects of canopy properties

    Science.gov (United States)

    Fleischbein, Katrin; Wilcke, Wolfgang; Goller, Rainer; Boy, Jens; Valarezo, Carlos; Zech, Wolfgang; Knoblich, Klaus

    2005-04-01

    Rainfall interception in forests is influenced by properties of the canopy that tend to vary over small distances. Our objectives were: (i) to determine the variables needed to model the interception loss of the canopy of a lower montane forest in south Ecuador, i.e. the storage capacity of the leaves S and of the trunks and branches St, and the fractions of direct throughfall p and stemflow pt; (ii) to assess the influence of canopy density and epiphyte coverage of trees on the interception of rainfall and subsequent evaporation losses.The study site was located on the eastern slope of the eastern cordillera in the south Ecuadorian Andes at 1900-2000 m above sea level. We monitored incident rainfall, throughfall, and stemflow between April 1998 and April 2001. In 2001, the leaf area index (LAI), inferred from light transmission, and epiphyte coverage was determined.The mean annual incident rainfall at three gauging stations ranged between 2319 and 2561 mm. The mean annual interception loss at five study transects in the forest varied between 591 and 1321 mm, i.e. between 25 and 52% of the incident rainfall. Mean S was estimated at 1.91 mm for relatively dry weeks with a regression model and at 2.46 mm for all weeks with the analytical Gash model; the respective estimates of mean St were 0.04 mm and 0.09 mm, of mean p were 0.42 and 0.63, and of mean pt were 0.003 and 0.012. The LAI ranged from 5.19 to 9.32. Epiphytes, mostly bryophytes, covered up to 80% of the trunk and branch surfaces. The fraction of direct throughfall p and the LAI correlated significantly with interception loss (Pearson's correlation coefficient r = -0.77 and 0.35 respectively, n = 40). Bryophyte and lichen coverage tended to decrease St and vascular epiphytes tended to increase it, although there was no significant correlation between epiphyte coverage and interception loss. Our results demonstrate that canopy density influences interception loss but only explains part of the total variation

  9. Shear-Stress Partitioning in Live Plant Canopies and Modifications to Raupach's Model

    Science.gov (United States)

    Walter, Benjamin; Gromke, Christof; Lehning, Michael

    2012-08-01

    The spatial peak surface shear stress {tau _S^'' on the ground beneath vegetation canopies is responsible for the onset of particle entrainment and its precise and accurate prediction is essential when modelling soil, snow or sand erosion. This study investigates shear-stress partitioning, i.e. the fraction of the total fluid stress on the entire canopy that acts directly on the surface, for live vegetation canopies (plant species: Lolium perenne) using measurements in a controlled wind-tunnel environment. Rigid, non-porous wooden blocks instead of the plants were additionally tested for the purpose of comparison since previous wind-tunnel studies used exclusively artificial plant imitations for their experiments on shear-stress partitioning. The drag partitioning model presented by Raupach (Boundary-Layer Meteorol 60:375-395, 1992) and Raupach et al. (J Geophys Res 98:3023-3029, 1993), which allows the prediction of the total shear stress τ on the entire canopy as well as the peak {(tau _S ^''/tau )^{1/2}} and the average {(tau _S^'/tau )^{1/2}} shear-stress ratios, is tested against measurements to determine the model parameters and the model's ability to account for shape differences of various roughness elements. It was found that the constant c, needed to determine the total stress τ and which was unspecified to date, can be assumed a value of about c = 0.27. Values for the model parameter m, which accounts for the difference between the spatial surface average {tau _S^' and the peak {tau _S ^'' shear stress, are difficult to determine because m is a function of the roughness density, the wind velocity and the roughness element shape. A new definition for a parameter a is suggested as a substitute for m. This a parameter is found to be more closely universal and solely a function of the roughness element shape. It is able to predict the peak surface shear stress accurately. Finally, a method is presented to determine the new a parameter for different kinds

  10. Modeling the bidirectional reflectance distribution function of mixed finite plant canopies and soil