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Sample records for broad-spectrum late blight

  1. Sgt1, but not Rar1, is essential for the RB-mediated broad-spectrum resistance to potato late blight

    Directory of Open Access Journals (Sweden)

    Wielgus Susan M

    2008-01-01

    Full Text Available Abstract Background Late blight is the most serious potato disease world-wide. The most effective and environmentally sound way for controlling late blight is to incorporate natural resistance into potato cultivars. Several late blight resistance genes have been cloned recently. However, there is almost no information available about the resistance pathways mediated by any of those genes. Results We previously cloned a late blight resistance gene, RB, from a diploid wild potato species Solanum bulbocastanum. Transgenic potato lines containing a single RB gene showed a rate-limiting resistance against all known races of Phytophthora infestans, the late blight pathogen. To better understand the RB-mediated resistance we silenced the potato Rar1 and Sgt1 genes that have been implicated in mediating disease resistance responses against various plant pathogens and pests. The Rar1 and Sgt1 genes of a RB-containing potato clone were silenced using a RNA interference (RNAi-based approach. All of the silenced potato plants displayed phenotypically normal growth. The late blight resistance of the Rar1 and Sgt1 silenced lines were evaluated by a traditional greenhouse inoculation method and quantified using a GFP-tagged P. infestans strain. The resistance of the Rar1-silenced plants was not affected. However, silencing of the Sgt1 gene abolished the RB-mediated resistance. Conclusion Our study shows that silencing of the Sgt1 gene in potato does not result in lethality. However, the Sgt1 gene is essential for the RB-mediated late blight resistance. In contrast, the Rar1 gene is not required for RB-mediated resistance. These results provide additional evidence for the universal role of the Sgt1 gene in various R gene-mediated plant defense responses.

  2. Sgt1, but not Rar1, is essential for the RB-mediated broad-spectrum resistance to potato late blight

    OpenAIRE

    Wielgus Susan M; Neumann Pavel; Kramer Lara C; Raasch John A; Bhaskar Pudota B; Austin-Phillips Sandra; Jiang Jiming

    2008-01-01

    Abstract Background Late blight is the most serious potato disease world-wide. The most effective and environmentally sound way for controlling late blight is to incorporate natural resistance into potato cultivars. Several late blight resistance genes have been cloned recently. However, there is almost no information available about the resistance pathways mediated by any of those genes. Results We previously cloned a late blight resistance gene, RB, from a diploid wild potato species Solanu...

  3. Gamma radiation-induced mutant of NSIC RC144 with broad-spectrum resistance to bacterial blight

    International Nuclear Information System (INIS)

    Mutant lines derived from gamma radiation-treated commercial variety NSIC RC144 were produced and screened for novel resistance to bacterial blight, one of the most serious diseases of rice. Preliminary screening of a bulk M2 population through induced method using race 3 of the pathogen Xanthomonas oryzae pv. oryzae (Xoo) resulted in the selection of 89 resistant plants. Subsequent repeated bacterial blight screenings and generation advance for five seasons resulted in the selection of two highly resistant M7 sister lines whose origin can be traced to a single M2 plant. DNA fingerprinting using 63 genome-wide simple sequence repeat (SSR) markers revealed an identical pattern in these lines. Using the same set of markers, they also exhibited 98% similarity to wild type NSIC RC144 indicating that the resistance is due to mutation and not due to genetic admixture or seed impurity. Two seasons of bacterial blight screening using 14 local isolates representing ten races of Xoo revealed an identical reaction pattern in these lines. The reaction pattern was observed to be unique compared to known patterns in four IRBB isolines (IRBB 4, 5, 7 and 21) with strong resistant reaction to bacterial blight suggesting possible novel resistance. The susceptible reaction in F1 testcrosses using Xoo race 6 and the segregation patterns in two F2 populations that fit with the expected 3 susceptible: 1 resistant ratio (P = 0.4, ns) suggest a single-gene recessive mutation in these lines. These mutants are now being used as resistance donor in the breeding program while further molecular characterization to map and characterize the mutated gene is being pursued

  4. Late blight and early blight resistance from Solanum hougasii introgressed into Solanum tuberosum

    Science.gov (United States)

    Late blight, caused by Phytophthora infestans, and early blight, incited by Alternaria solani,are the two most widely occurring foliar diseases of potato in the U.S. Resistance to both diseases is necessary if growers are to reduce fungicide applications. Field resistance to late blight has previous...

  5. The early days of late blight

    OpenAIRE

    Birch, Paul RJ; Cooke, David EL

    2013-01-01

    Large-scale DNA sequencing of samples of foliage collected in the 19th century from plants infected with late blight has shown that the potato famines of the 1840s were triggered by a single clonal lineage of Phytophthora infestans, called HERB-1, which persisted for at least 50 years.

  6. Effectiveness of selected preparations used in the fight against alternaria blight and late blight on potatoes

    Directory of Open Access Journals (Sweden)

    Tomasz Maciejewski

    2011-09-01

    Full Text Available In experiments carried out in 2007-2008 the effect was explored of performance of preparations Gwarant 500 SC and Bravo 500 SC in alternaria blight and potato late blight. Both tested formulations limited the illnesses and had no significant effect on the tuber yield obtained, its structure and content of starch.

  7. NBS Proifling Identiifes Potential Novel Locus from Solanum demissum That Confers Broad-Spectrum Resistance to Phytophthora infestans

    Institute of Scientific and Technical Information of China (English)

    ZHANG Kun; XU Jian-fei; DUAN Shao-guang; PANG Wan-fu; BIAN Chun-song; LIU Jie; JIN Li-ping

    2014-01-01

    Potato late blight, caused by the oomycete pathogen Phytophthora infestans, is the most serious disease of potato worldwide. The adoption of varieties with resistance genes, especially broad-spectrum resistance genes, is the most efifcient approach to control late blight. Solanum demissum is a well-known wild potato species from which 11 race-speciifc resistance genes have been identiifed, however, no broad-spectrum resistance genes like RB have been reported in this species. Here, we report a novel reisistance locus from S. demissum that potentially confer broad-spectrum resistance to late blight. A small segregating population of S. demissum were assessed for resistance to aggressive P. infestans isolates (race 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, and 11). This coupled with nucleotide binding site (NBS) proifling analyses, led to the identiifcation of three fragments that linked to the potential candidate resistance gene(s). Cloning and sequence analysis of these fragments suggested that the identiifed resistance gene locus is located in the region containing R2 resistance gene at chromosome 4. Based on the sequences of the cloned fragments, a co-segregating sequence characterized ampliifed region (SCAR) marker, RDSP, was developed. The newly identiifed marker RDSP will be useful for marker assisted breeding and further cloning of this potential resistance gene locus.

  8. Genetic variability in the pistachio late blight fungus, Alternaria alternata

    Science.gov (United States)

    Genetic variation in the pistachio late blight fungus, Alternaria alternata, was investigated by restriction fragment length polymorphism (RFLP) in the rDNA region. Southern hybridization of EcoRI, HindIII, and Xbal digested fungal DNA with a RNA probe derived from Alt1, an rDNA clone isolated from ...

  9. Impact of new populations of Phytophthora infestans on integrated late blight management

    OpenAIRE

    Flier, W. G.; Kessel, G.J.T.; Bosch, van den, F.J.P.; Turkensteen, L.J.

    2002-01-01

    A recent migration of a variable population of P. infestans has largely displaced the clonal A1 population in Western Europe. Sexual reproduction in European late blight populations is now possible and has been reported. The increased levels of aggressiveness form an important epidemiological feature of this new blight population. The impact of `new blight¿ on crop protection strategies based on late blight resistant cultivars and fungicides is discussed

  10. Late blight in organic potato growing: managing resistance and early tuber growth

    OpenAIRE

    Hospers - Brands, Monique; Timmermans, Bart; van der Putten, Peter; Struik, Paul; Tiemens-Hulscher, Marjolein; Lammerts van Bueren, Edith

    2008-01-01

    In organic potato production yields are often reduced by potato late blight (Phytophthora infestans). Two aspects are important in late blight management: a sufficiently high (field) resistance to late blight, and early tuber formation. With early tuber formation the period of tuber growth is extended at the beginning, and with a high resistance level at the end. In 2006 and 2007 experiments were carried out in which the effects of the physiological age of seed tubers on field resistance ...

  11. Estimating the global severity of potato late blight with GIS-linked disease forecast models

    NARCIS (Netherlands)

    Hijmans, R.J.; Forbes, G.A.; Walker, T.S.

    2000-01-01

    Global severity of potato late blight was estimated by linking two disease forecast models, Blitecast and Simcast, to a climate data base in a geographic information system (GIS). The disease forecast models indirectly estimate late blight severity by determining how many sprays are needed during a

  12. Analysing potato late blight control as a social-ecological system using fuzzy cognitive mapping

    NARCIS (Netherlands)

    Pacilly, Francine C.A.; Groot, Jeroen C.J.; Hofstede, Gert Jan; Schaap, Ben F.; Lammerts van Bueren, Edith

    2016-01-01

    Potato late blight, caused by Phytophthora infestans, is one of the main diseases in potato production, causing major losses in yield. Applying environmentally harmful fungicides is the prevailing and classical method for controlling late blight, thus contaminating food and water. There is theref

  13. Biological control of late blight of potatoes: In vivo and in vitro evaluation of microbial antagonists against tuber blight.

    OpenAIRE

    Hollywood, J. C.

    2004-01-01

    The cost of losses and control measures attributed to late blight of potatoes caused by Phytophthora infestans, are estimated to exceed {dollar}5 billion annually. Breeding for resistance is difficult owing to the tetraploid genotype of potato and current strains of the pathogen have developed resistance to chemical control. Consequently the search for biological control has assumed greater importance. In this investigation an in vivo bioassay was used to select soils antagonistic to late bli...

  14. Unveiling and deploying durability of late blight resistance in potato : from natural stacking to cisgenic stacking

    OpenAIRE

    Kwang-Ryong Jo

    2013-01-01

    The potato, which receives an increased attention as a food crop, has long been in threats from the oomycete Phytophthora infestans, the causal agent of late blight. This disease still remains the most important constraint in potato producing regions of the world. It might cause the complete destruction of the foliage and tubers of potato if meteorological conditions are conducive to the onset and spread of late blight epidemics. Although fungicides applications provide sufficient levels of l...

  15. Biocontrol of Late Blight (Phytophthora capsici Disease and Growth Promotion of Pepper by Burkholderia cepacia MPC-7

    Directory of Open Access Journals (Sweden)

    Mao Sopheareth

    2013-03-01

    Full Text Available A chitinolytic bacterial strain having strong antifungal activity was isolated and identified as Burkholderia cepacia MPC-7 based on 16S rRNA gene analysis. MPC-7 solubilized insoluble phosphorous in hydroxyapatite agar media. It produced gluconic acid and 2-ketogluconic acid related to the decrease in pH of broth culture. The antagonist produced benzoic acid (BA and phenylacetic acid (PA. The authentic compounds, BA and PA, showed a broad spectrum of antimicrobial activity against yeast, several bacterial and fungal pathogens in vitro. To demonstrate the biocontrol efficiency of MPC-7 on late blight disease caused by Phytophthora capsici, pepper plants in pot trials were treated with modified medium only (M, M plus zoospore inoculation (MP, MPC-7 cultured broth (B and B plus zoospore inoculation (BP. With the sudden increase in root mortality, plants in MP wilted as early as five days after pathogen inoculation. However, plant in BP did not show any symptom of wilting until five days. Root mortality in BP was markedly reduced for as much as 50%. Plants in B had higher dry weight, P concentration in root, and larger leaf area compared to those in M and MP. These results suggested that B. cepacia MPC-7 should be considered as a candidate for the biological fertilizer as well as antimicrobial agent for pepper plants.

  16. Effects of Crop Sanitation and Ridomil MZ Applications on Late Blight Severity and Tomato Yields in Cameroon

    Directory of Open Access Journals (Sweden)

    Younyi, PC.

    2004-01-01

    Full Text Available Tomato (Lycopersicon esculentum production in Cameroon is usually handicapped by late blight caused by Phytophthora infestans. A field trial was conducted during 1997 in Dschang, Cameroon, to assess the effect of Ridomil MZ (8% metalaxyl + 64% mancozeb sprays, and sanitation (a weekly picking of diseased leaves on late blight development and yield of five tomato varieties. Plots received Ridomil MZ (2.5 kg/ha and sanitation singly or combined. Control plots were neither sprayed nor cleaned from diseased leaves. All treatments were applied ten times in a weekly schedule. Late blight intensity was assessed every 7 days and marketable fruit yields were obtained at maturity. Differences in late blight intensity between sanitation and control plots were not significant (P= 0,05. Fungicide treatments were more effective than sanitation in reducing late blight severity. Percent fruit infection was 100% in control or sanitation plots of ARP I366-1, ARP D1, ARP D2, Roma, and no marketable fruits were harvested on these treatments. Late blight was less severe on Mecline compared to the other varieties. Consequently, Mecline out-yielded Roma, ARP I366-1, ARP D1 and ARP D2 varieties. Results suggest that the fungicide-alternative method of late blight control, using sanitation is not as effective in tomato late blight management as appropriate fungicide sprays.

  17. Quantitative Effects of Early and Late Blights on Tomato Yields in Cameroon

    Directory of Open Access Journals (Sweden)

    Fontem, DA.

    2003-01-01

    Full Text Available Early blight caused by Alternaria solani and late blight caused by Phytophthora infestans are the major diseases of tomato (Lycopersicon esculentum in Cameroon. The effect of both diseases on fruit yield was evaluated during the 1995 growing season in Dschang, Cameroon.Ten varieties were planted in the first trial (March-July and nine in the second (July- November. In both trials, plots were sprayed weekly with Ridomil Plus (2.0 kg/ha before flowering and with maneb (1.6 kg/ha after flowering. Early blight was more severe in the early part of the first trial, while late blight caused most damage during the second. Marketable yields varied according to variety. High yields in sprayed plots were obtained in Dona F1 (61.63 t/ha and Heinz 1370 (68.24 t/ha during the first trial, and in Fline (58.35 t/ha, Mecline (64.25 t/ha, and Moboline (55.16 t/ha during the second trial. Percent fruit infection in sprayed plots caused by both diseases varied according to variety from 12 to 65% in the first season and from 14 to 52% in the second, while losses in marketable yields for both blights were as high as 100% in unsprayed plots.

  18. Durable Late Blight Resistance in Potato Through Dynamic Varieties Obtained by Cisgenesis

    NARCIS (Netherlands)

    Haverkort, A.J.; Boonekamp, P.M.; Hutten, R.; Jacobsen, E.; Lotz, L.A.P.; Kessel, G.J.T.; Vossen, J.H.; Visser, R.G.F.

    2016-01-01

    From 2006 through 2015, a research project on Durable Resistance in potato against Phytophthora (DuRPh) was carried out at Wageningen University and Research Centre. Its objective was to develop a proof of principle for durable resistance against late blight by cisgenesis. This public-funded proj

  19. Unveiling and deploying durability of late blight resistance in potato : from natural stacking to cisgenic stacking

    NARCIS (Netherlands)

    Kwang-Ryong Jo,

    2013-01-01

    The potato, which receives an increased attention as a food crop, has long been in threats from the oomycete Phytophthora infestans, the causal agent of late blight. This disease still remains the most important constraint in potato producing regions of the world. It might cause the complete destruc

  20. The role of oospores in the epidemiology of potato late blight

    NARCIS (Netherlands)

    Kessel, G.J.T.; Andersson, B.; Widmark, A.K.; Yuen, J.E.; Evenhuis, A.; Turkensteen, L.J.; Lehtinen, A.; Nielsen, B.; Ravnskov, S.; Hansen, J.G.; Hermansen, A.; Brurberg, M.B.; Nordskog, B.

    2009-01-01

    Potato late blight (Phytophthora infestans) is a plant disease feared globally by farmers and the potato industry. P. infestans is a heterothallic oomycete with two mating types. Until recently the pathogen was limited to surviving between seasons as living mycelia in its host plant in most parts of

  1. Effect of simulated rain on the efficiency of fungicides in potato late blight and early blight control

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    Jesus Guerino Tofoli

    2014-12-01

    Full Text Available Rainfastness of fungicides used in the control of late blight (Phytophthora infestans and early blight (Alternaria solani of potato was evaluated under green house and laboratory conditions. ‘Agata’ and ‘Monalisa’ plants treated with fungicides against both diseases were subjected to 20 mm controlled rain simulation for 6 min at 30 min, 1, 2, and 4 h after application. Once all leaves had dried, foliar discs were transferred to Petri dishes and inoculated with the respective pathogens. The plates were then incubated in a BOD chamber for a 12-h photoperiod at 18°C and 25°C, respectively. Disease severity was evaluated by determining the area (% of the foliar discs affected by disease on 5 and 7 days post-inoculation. The results suggest that systemic or inherent tenacity fungicides were less influenced by the simulated rain as compared to contact fungicides. An increase in drying time promoted higher control levels of both diseases, indicating a better retention and absorption of the tested fungicides.

  2. Broad spectrum antiangiogenic treatment for ocular neovascular diseases.

    Directory of Open Access Journals (Sweden)

    Ofra Benny

    Full Text Available UNLABELLED: Pathological neovascularization is a hallmark of late stage neovascular (wet age-related macular degeneration (AMD and the leading cause of blindness in people over the age of 50 in the western world. The treatments focus on suppression of choroidal neovascularization (CNV, while current approved therapies are limited to inhibiting vascular endothelial growth factor (VEGF exclusively. However, this treatment does not address the underlying cause of AMD, and the loss of VEGF's neuroprotective can be a potential side effect. Therapy which targets the key processes in AMD, the pathological neovascularization, vessel leakage and inflammation could bring a major shift in the approach to disease treatment and prevention. In this study we have demonstrated the efficacy of such broad spectrum antiangiogenic therapy on mouse model of AMD. METHODS AND FINDINGS: Lodamin, a polymeric formulation of TNP-470, is a potent broad-spectrum antiangiogenic drug. Lodamin significantly reduced key processes involved in AMD progression as demonstrated in mice and rats. Its suppressive effects on angiogenesis, vascular leakage and inflammation were studied in a wide array of assays including; a Matrigel, delayed-type hypersensitivity (DTH, Miles assay, laser-induced CNV and corneal micropocket assay. Lodamin significantly suppressed the secretion of various pro-inflammatory cytokines in the CNV lesion including monocyte chemotactic protein-1 (MCP-1/Ccl2. Importantly, Lodamin was found to regress established CNV lesions, unlike soluble fms-like tyrosine kinase-1 (sFlk-1. The drug was found to be safe in mice and have little toxicity as demonstrated by electroretinography (ERG assessing retinal and by histology. CONCLUSIONS: Lodamin, a polymer formulation of TNP-470, was identified as a first in its class, broad-spectrum antiangiogenic drug that can be administered orally or locally to treat corneal and retinal neovascularization. Several unique properties

  3. Broad spectrum antibiotic compounds and use thereof

    Energy Technology Data Exchange (ETDEWEB)

    Koglin, Alexander; Strieker, Matthias

    2016-07-05

    The discovery of a non-ribosomal peptide synthetase (NRPS) gene cluster in the genome of Clostridium thermocellum that produces a secondary metabolite that is assembled outside of the host membrane is described. Also described is the identification of homologous NRPS gene clusters from several additional microorganisms. The secondary metabolites produced by the NRPS gene clusters exhibit broad spectrum antibiotic activity. Thus, antibiotic compounds produced by the NRPS gene clusters, and analogs thereof, their use for inhibiting bacterial growth, and methods of making the antibiotic compounds are described.

  4. Applied Biotechnology to combat the late blight in potato caused by Phytophthora infestans

    OpenAIRE

    Haverkort, A.J.; Struik, P. C.; Visser, R. G. F.; Jacobsen, E.

    2009-01-01

    Potato is an important crop, grown worldwide. It suffers from many pests and diseases among which late blight, caused by the oomycete Phytophthora infestans, is the worst. The disease is still causing major damage in many potato production areas and control is only possible by applying fungicides frequently. The knowledge on the molecular biology and genetics of the interaction between the plant and the oomycete is developing rapidly. These are relevant fields of study, currently dominated by...

  5. In vitro induction of variability through radiation for late blight resistance and heat tolerance in potato

    International Nuclear Information System (INIS)

    In vitro cultured shoots of potato, cvs. 'Kufri Jyoti' and 'Kufri Chandramukhi', were irradiated with 20 and 40 Gy gamma rays. Microtubers, obtained from MIV3 shoots multiplied in vitro, were planted in pots. The resulting plants were screened for resistance to late blight, using detached leaf method. In 'Kufri Chandramukhi', 42% plants and in 'Kufri Jyoti' 36% plants, obtained from 40 Gy treatment, showed resistance to late blight. The frequency of resistant plants was lower from 20 Gy treatment. The progenies of putatively resistant plants were grown in field, and inoculated with sporangial inoculum of late blight fungus. The field grown progeny segregated for disease resistance, and approximately 56% plants showed resistance. During the next propagation, the frequency of resistant plants increased to 72%. For developing heat tolerance, microtubers obtained from 20 and 40 Gy treatments and in vitro multiplied M1V3 shoots were cultured at high temperature of 28C. In both varieties, the number of the microtubers per plant was highly reduced and the resulting microtubers had distorted shape but showed better germination (62%), even in early sowing at relatively higher temperature. Of the two radiation doses, the higher dose of 40 Gy gave better results in both the varieties. Heat tolerance was also assessed from chlorophyll persistence. The progenies from putative heat-tolerant plants were tested in field by planting at higher temperature in two subsequent generations. The heat tolerant plants segregated in each generation, but the frequency of heat-tolerant plants increased. (author)

  6. Palisade Russet: A late blight resistant potato cultivar having a low incidence of sugar ends and high specific gravity

    Science.gov (United States)

    Palisade Russet is a medium-late maturing, lightly russeted potato breeding clone notable for its resistance to late blight (Phytophthora infestans) infection of foliage and tuber. Palisade Russet is suitable for processing with low tuber glucose concentrations observed following long-term storage ...

  7. Broad spectrum anthelmintic potential of Cassia plants

    Institute of Scientific and Technical Information of China (English)

    Suman Kundu; Saptarshi Roy; Larisha Mawkhleing Lyndem

    2014-01-01

    Objective: To study the in vitro anthelmintic efficacy of Cassia alata (C. alata), Cassia(C. angustifolia) and Cassia occidentalis (C. occidentalis). angustifolia Methods: Crude ethanol extract from leaves of the three plants were prepared in rotary evaporator and different concentrations (10, 20 and 40 mg/mL) of leaf extracts were used for treatment on different representatives of helminthes (Heterakis gallinarum, Raillietina tetragona and Catatropis sp.) from domestic fowl (Gallus gallus domesticus). Loss of motility and death were monitored frequently.Results: C. alata showed early paralysis in all worms treated followed by C. angustifolia. C. occidentalis in combination with C. alata together caused early paralysis in all treated worms than the combination of C. alata with C. angustfolia. While Heterakis gallinarum in control survived for (81.33±2.07) h, treated worms lost their motility at (5.71±0.10) h, (6.60±0.86) h and (13.95±0.43) h with C. angustifolia, C. alata and C. occidentalis respectively at a concentration of 40 mg/mL which showed better efficacy than albendazole. Catatropis sp. survival period was (26.49±1.38) h in control, but with plant treatment, it lost its motility in just (0.57±0.08) h, (1.00±0.12) h and (1.47±0.40) h at 40 mg/mL concentration of C. alata, C. angustifolia and C. occidentalis respectively.Raillietina tetragona on the other hand became paralysed at (1.68±0.27) h, (2.95±0.29) h and (4.13±0.31) h with above concentrations treated with three plants respectively, however in control it survived up to (81.93±4.71) h.Conclusions:This present study indicated broad spectrum vermifugal activity of all plants tested.

  8. The use of tissue culture techniques with irradiation to improve potato resistance to late blight

    International Nuclear Information System (INIS)

    A mutation breeding program was conducted to improve potato (Solanum tuberosum) resistance to late blight disease caused by Phytophthora infestans. In vitro cultured explants from potato cvs. Draga, Diamant, Spunta were irradiated with gamma ray doses 25, 30, and 35 Gy. Growing shoots were cut and re-cultured every 2 weeks until the 4th generation (MV4) to make sure no chimeral tissues still existed in the mutant material. Plantlets were subsequently propagated to obtain enough explants for in vitro selection pressure. Around 3000 plantlets from the three cultivars were subjected to selection pressure using co-culture technique. MV4 explants were incubated in jars, containing MS medium, with mycelia of P. infestans. Surviving plantlets were propagated and re-incubated with the pathogen for three consecutive generations. Resistant plantlets were acclimatized and transferred to pots and grown under glasshouse conditions. Plants were later inoculated, at the adult stage, with sporangial suspension. Cultivar Draga produced the highest number of resistant plants. Ten plants of Draga appeared to be resistant to late blight whereas only one plant from each of the other 2 cultivars was resistant. Mutant plants varied in number of produced minitubers from 13 to 70, Also, weight of these minitubers varied from less than 1 to 35 grams. Selected mutant lines will undergo further testing under field conditions for P. infestans resistance and other agronomic characteristics. (author)

  9. In vitro induction, isolation and selection of potato mutants resistant to late blight

    International Nuclear Information System (INIS)

    A mutation breeding program was conducted to improve potato resistance to late blight disease caused by Phytophthora infestans. In vitro cultured explants from cvs Draga, Diamant, Spunta were irradiated with gamma ray doses 25, 30, and 35 Gy. Growing shoots were cut and re-cultured every 2 weeks until the 4th generation (MV4) to make sure no chimeral tissues still existed in the mutant material. Plantlets were subsequently propagated to obtain enough explants for in vitro selection pressure. Around 3,000 plantlets from the 3 cultivars were subjected to selection pressure using co-culture technique. MV4 explants were incubated in jars, containing MS medium, with mycelia of P. infestans. Surviving plantlets were propagated and re-incubated with the pathogen for 3 consecutive generations. Resistant plantlets were acclimatized and transferred to pots and grown under glasshouse conditions. Plants were later inoculated, at the adult stage, with sporangial suspension. Cv Draga produced the highest number of resistant plants. Ten plants of Draga appeared to be resistant to late blight, whereas only one plant from each of the other 2 cvs was resistant. Mutant plants varied in number of produced minitubers from 13 to 70. Also, weight of these minitubers varied from less than 1 to 35 grams. Selected mutant lines will undergo further testing under field conditions for P. infestans resistance and other agronomic characteristics

  10. An Assessment of the Impact of Two Late Blight Tolerant Potato Varieties

    International Nuclear Information System (INIS)

    A study was made to assess the impact of two late blight tolerant potato varieties Tigoni and Asante releases in 1998. The appraisal and impact assessment set out to collect information on the adoption of the two varieties; assess their economic impact; and forecast future prospects for these two varieties and identity constraints to their adoption and diffusion in three divisions of Molo, Timboroa and Laikipia. The methodology adopted was conducting field surveys between September and October 2001, and gathering secondary information from the Ministry of Agriculture, research Centres, seed companies, NGO's and farmers. Results indicated that high yield, early maturity, tolerant to late blight, good market for ware potatoes and good taste were the advantages of Tigoni and Asante, widely recognised in all survey sites. Disadvantages of Tigoni and Asante were poor storage, rapid greening of tubers (mainly for Tigoni), and limited availability of planting material. The two varieties had higher yield benefits, net benefit per hectare and higher rates of return compared to the local varieties. the rate of returns when the local cultivars were substituted by the new improved varieties ranged from 556 to 1070%. Data on diffusion of Tigoni and Asante showed that combined acreage of varieties Tigoni and Asante rose to 196.3, 137.5 and 1476 ha in Molo, Timboroa and Laikipia respectively. The future forecast for the two varieties is good if the limitation on seed availability is addressed

  11. Complete Genome Sequence of Pseudomonas fluorescens LBUM636, a Strain with Biocontrol Capabilities against Late Blight of Potato.

    Science.gov (United States)

    Morrison, Christopher K; Novinscak, Amy; Gadkar, Vijay J; Joly, David L; Filion, Martin

    2016-01-01

    Herein provided is the full-genome sequence of Pseudomonas fluorescens LBUM636. This strain is a plant growth-promoting rhizobacterium (PGPR) which produces phenazine-1-carboxylic acid, an antibiotic involved in the biocontrol of numerous plant pathogens, including late blight of potato caused by the plant pathogen Phytophthora infestans. PMID:27231373

  12. Rainfall thresholds as support for timing fungicide applications in the control of potato late blight in Ecuador and Peru

    DEFF Research Database (Denmark)

    Kromann, Peter; Taipe, Arturo; Perez, Willmer G.;

    2009-01-01

    Accumulated rainfall thresholds were studied in seven field experiments conducted in Ecuador and Peru for their value in timing applications of fungicide to control potato late blight, caused by Phytophthora infestans. Fungicide regimes based on accumulated rainfall thresholds ranging from 10 to 70...

  13. Genetic control of late blight, yield and some yield related traits in tomato (lycopersicon esculentum mill.)

    International Nuclear Information System (INIS)

    Genetic control of late blight (LB) and some economic traits was assessed to identify genotypes suitable for the hybrids were derived from crossing of 2 male sterile lines viz., development of late blight resistant hybrids in tomato. 10 F/sub 1/ hybrid were derived from crossing of 2 male sterile lines viz., TMS1 and TMS2 with 5 elite lines viz., Nagina, Riogrande, Roma, 88572 and Picdenato according to line x tester technique. Disease resistance was measured using detached leaf and whole plant assay techniques. Data were also recorded for days to maturity, number of fruit per plant, single fruit weight and yield per plant. The analysis of variance showed significant differences among crosses, lines, testers and line x tester interaction for almost all parameters. Estimate of genetic components indicated preponderance of additive type of gene action for detached leaf assay, whole plant assay, number of fruit per plant and yield per plant whereas non-additive type of gene action for days to maturity and single fruit weight. Among parents, TMS2, Nagina, Roma and Picdenato showed significant favorable general combing ability (GCA) effects for disease rating traits while TMS1 and Riogrande indicated desirable GCA effects for yield and some yield related traits. Among hybrids, TMS2 x Roma and TMS1 x Riogrande had significant specific combing ability (SCA) effects for detached and whole plant assays. However, hybrid TMS2 x Roma appeared as good combination of LB resistance as it had both parents with desirable GCA effects. All hybrids showed average type of SCA effects for yield and yield components. Genetic control of LB revealed that a multiple crossing program involving genotypes with high GCA effects would be rewarding to identify LB resistant genotypes in early generations. (author)

  14. Broad Spectrum Sanitizing Wipes with Food Additives Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Microcide proposes to develop novel multipurpose non-toxic sanitizing wipes that are aqueous based, have shelf life of 3-5 years, have broad spectrum microbicidal...

  15. Optimisation of cultural practices for organic potato: effect of irrigation regimes on the development of late blight, crop yield and quality

    OpenAIRE

    Lambion, Jérôme; Bertrand, Cyril

    2005-01-01

    A trial was established in 2003, in Southern France, to assess under organic farming conditions the effect of top irrigation with sprinklers on potato yield, but also to evaluate side effects on epidemics, with a focus on late blight (Phytophthora infestans L.). Two varieties, one susceptible (Charlotte) and one with a good level of resistance to late blight (Eden), have been planted. Three irrigation regimes have been applied : no irrigation [NO], reduced or optimized irrigation [OPT] and ir...

  16. In vitro induction of variation through radiation for late blight resistance and heat tolerance in potato

    International Nuclear Information System (INIS)

    In vitro plants were obtained from nodal sections of sprouts of cvs. 'Kufri Jyoti' and 'Kufri Chandramukhi' of potato cultured on MS medium with 3% sucrose. Callus from leaves of in vitro cultured plantlets was induced on modified Linsmaier and Skoog medium supplemented with 5 mg/1 NAA. The obtained shoots and calli were irradiated with 20 and 40 Gy gamma rays. Irradiatied shoots were transferred to MS medium with 8% sucrose for multiplication, and then to MS medium with 8% sucrose and 10 mg/1 BAP to induce microtuber formation, which gave on average 1.3 microtubers per plant. The microtubers were planted in pots and variation was observed in plant morphology and tuber characters. To study variation for late blight resistance, irradiated calli were kept on Gamborg B-5 medium with culture filtrate of Phytophthora infestans. To induce variation for heat tolerance, in vitro shoots from irradiated material were mass-propagated and allowed to produce microtubers at high temperature. (author). 3 refs, 3 tabs

  17. Development of late blight resistance and heat tolerance through gamma irradiation of shoot cultures in potato

    International Nuclear Information System (INIS)

    In vitro shoot cultures of two potato varieties viz., Kufri jyoti and Kufri Chandramukhi were gamma irradiated at 20 Gy and 40 Gy. Micro tubers were induced in micro propagated M1V3 generation. For heat tolerance micro tubers were induced at elevated (28C) incubation temperature (optimum being 201C) and were characterized by early sowing, chlorophyll persistence and harvest index. The number of micro tubers/plant was highly reduced at elevated temperature and the resulting tubers exhibited distorted shapes and growth of apical buds. Thus obtained micro tubers exhibited better germination (62.3%) even in early sowing at relatively higher temperature. The progenies from putative heat tolerant plants were grown in the field by sowing at higher temperature for four subsequent generations. Heat tolerant plants segregated in each generation but the frequency of heat tolerant plants increased in the advanced generation. For developing late blight resistance micro tubers produced from irradiated shoot cultures were sown in pots and resulting plants were screened using detached leaf method. The progenies of putative resistant plants grown in the field were artificially inoculated with sporangial inoculum of Phytophthora infection's. Field grown plants exhibited segregation with respect to disease reaction and about 56 per cent plants showed resistance. Segregation was reduced during following generation and the frequency of resistant plants was increased up to 72.3 per cent. Thus, repeated selections has helped in developing stable mutants in both the varieties

  18. Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives.

    Directory of Open Access Journals (Sweden)

    Jaime E Blair

    Full Text Available To better understand the evolutionary history of a group of organisms, an accurate estimate of the species phylogeny must be known. Traditionally, gene trees have served as a proxy for the species tree, although it was acknowledged early on that these trees represented different evolutionary processes. Discordances among gene trees and between the gene trees and the species tree are also expected in closely related species that have rapidly diverged, due to processes such as the incomplete sorting of ancestral polymorphisms. Recently, methods have been developed for the explicit estimation of species trees, using information from multilocus gene trees while accommodating heterogeneity among them. Here we have used three distinct approaches to estimate the species tree for five Phytophthora pathogens, including P. infestans, the causal agent of late blight disease in potato and tomato. Our concatenation-based "supergene" approach was unable to resolve relationships even with data from both the nuclear and mitochondrial genomes, and from multiple isolates per species. Our multispecies coalescent approach using both Bayesian and maximum likelihood methods was able to estimate a moderately supported species tree showing a close relationship among P. infestans, P. andina, and P. ipomoeae. The topology of the species tree was also identical to the dominant phylogenetic history estimated in our third approach, Bayesian concordance analysis. Our results support previous suggestions that P. andina is a hybrid species, with P. infestans representing one parental lineage. The other parental lineage is not known, but represents an independent evolutionary lineage more closely related to P. ipomoeae. While all five species likely originated in the New World, further study is needed to determine when and under what conditions this hybridization event may have occurred.

  19. Comparative transcript profiling by SuperSAGE identifies novel candidate genes for controlling potato quantitative resistance to late blight not compromised by late maturity.

    Directory of Open Access Journals (Sweden)

    Astrid M. Draffehn

    2013-11-01

    Full Text Available Resistance to pathogens is essential for survival of wild and cultivated plants. Pathogen susceptibility causes major losses of crop yield and quality. Durable field resistance combined with high yield and other superior agronomic characters are therefore important objectives in every crop breeding program. Precision and efficacy of resistance breeding can be enhanced by molecular diagnostic tools, which result from knowledge of the molecular basis of resistance and susceptibility. Breeding uses resistance conferred by single R genes and polygenic quantitative resistance. The latter is partial but considered more durable. Molecular mechanisms of plant pathogen interactions are elucidated mainly in experimental systems involving single R genes, whereas most genes important for quantitative resistance in crops like potato are unknown. Quantitative resistance of potato to Phytophthora infestans causing late blight is often compromised by late plant maturity, a negative agronomic character. Our objective was to identify candidate genes for quantitative resistance to late blight not compromised by late plant maturity. We used diagnostic DNA-markers to select plants with different field levels of maturity corrected resistance (MCR to late blight and compared their leaf transcriptomes before and after infection with P. infestans using SuperSAGE (serial analysis of gene expression technology and next generation sequencing. We identified 2034 transcripts up or down regulated upon infection, including a homolog of the kiwi fruit allergen kiwellin. 806 transcripts showed differential expression between groups of genotypes with contrasting MCR levels. The observed expression patterns suggest that MCR is in part controlled by differential transcript levels in uninfected plants. Functional annotation suggests that, besides biotic and abiotic stress responses, general cellular processes such as photosynthesis, protein biosynthesis and degradation play a role

  20. QTL analysis of late blight resistance in a diploid potato family of Solanum phureja x S. stenotomum.

    Science.gov (United States)

    Costanzo, S; Simko, I; Christ, B J; Haynes, K G

    2005-08-01

    Field resistance to Phytophthora infestans (Mont.) de Bary, the causal agent of late blight in potatoes, has been characterized in a potato segregating family of 230 full-sib progenies derived from a cross between two hybrid Solanum phureja x S. stenotomum clones. The distribution of area under the disease progress curve values, measured in different years and locations, was consistent with the inheritance of multigenic resistance. Relatively high levels of resistance and transgressive segregations were also observed within this family. A genetic linkage map of this population was constructed with the intent of mapping quantitative trait loci (QTLs) associated with this late blight field resistance. A total of 132 clones from this family were genotyped based on 162 restriction fragment length polymorphism (RFLP) markers. The genome coverage by the map (855.2 cM) is estimated to be at least 70% and includes 112 segregating RFLP markers and two phenotypic markers, with an average distance of 7.7 cM between two markers. Two methods were employed to determine trait-marker association, the non-parametric Kruskal-Wallis test and interval mapping analysis. Three major QTLs were detected on linkage group III, V, and XI, explaining 23, 17, and 10%, respectively, of the total phenotypic variation. The present study revealed the presence of potentially new genetic loci in this diploid potato family contributing to general resistance against late blight. The identification of these QTLs represents the first step toward their introgression into cultivated tetraploid potato cultivars through marker-assisted selection. PMID:15931506

  1. The broad spectrum revisited: Evidence from plant remains

    OpenAIRE

    Weiss, Ehud; Wetterstrom, Wilma; Nadel, Dani; Bar-Yosef, Ofer

    2004-01-01

    The beginning of agriculture is one of the most important developments in human history, with enormous consequences that paved the way for settled life and complex society. Much of the research on the origins of agriculture over the last 40 years has been guided by Flannery's [Flannery, K. V. (1969) in The Domestication and Exploitation of Plants and Animals, eds. Ucko, P. J. & Dimbleby, G. W. (Duckworth, London), pp. 73–100] “broad spectrum revolution” (BSR) hypothesis, which posits that the...

  2. High-throughput discovery of broad-spectrum peptide antibiotics

    OpenAIRE

    Rathinakumar, Ramesh; Wimley, William C.

    2010-01-01

    Membrane-permeabilizing peptide antibiotics are an underutilized weapon in the battle against drug-resistant microorganisms. This is true, in part, because of the bottleneck caused by the lack of explicit design principles and the paucity of simple high-throughput methods for selection. In this work, we characterize the requirements for broad-spectrum antimicrobial activity by membrane permeabilization and find that different microbial membranes have very different susceptibilities to permeab...

  3. Broad spectrum assessment of the epitope fluctuation--Immunogenicity hypothesis.

    Science.gov (United States)

    Grosch, Jason S; Yang, Jing; Shen, Alice; Sereda, Yuriy V; Ortoleva, Peter J

    2015-11-01

    Prediction of immunogenicity is a substantial barrier in vaccine design. Here, a molecular dynamics approach to assessing the immunogenicity of nanoparticles based on structure is presented. Molecular properties of epitopes on nonenveloped viral particles are quantified via a set of metrics. One such metric, epitope fluctuation (and implied flexibility), is shown to be inversely correlated with immunogenicity for each of a broad spectrum of nonenveloped viruses. The molecular metrics and experimentally determined immunogenicities for these viruses are archived in the open-source vaccine computer-aided design database. Results indicate the promise of computer-aided vaccine design to bring greater efficiency to traditional lab-based vaccine discovery approaches. PMID:26187254

  4. Antiviral drug discovery: broad-spectrum drugs from nature.

    OpenAIRE

    Martinez, J P; Sasse, F; Brönstrup, M; Diez, J; Meyerhans, A

    2015-01-01

    Covering: up to April 2014. The development of drugs with broad-spectrum antiviral activities is a long pursued goal in drug discovery. It has been shown that blocking co-opted host-factors abrogates the replication of many viruses, yet the development of such host-targeting drugs has been met with scepticism mainly due to toxicity issues and poor translation to in vivo models. With the advent of new and more powerful screening assays and prediction tools, the idea of a drug that can efficien...

  5. Quantitative label-free phosphoproteomics of six different life stages of the late blight pathogen phytophthora infestans reveals abundant phosphorylation of members of the CRN effector family

    NARCIS (Netherlands)

    Resjö, Svante; Ali, Ashfaq; Meijer, Harold J G; Seidl, Michael F.; Snel, Berend; Sandin, Marianne; Levander, Fredrik; Govers, Francine; Andreasson, Erik

    2014-01-01

    The oomycete Phytophthora infestans is the causal agent of late blight in potato and tomato. Since the underlying processes that govern pathogenicity and development in P. infestans are largely unknown, we have performed a large-scale phosphoproteomics study of six different P. infestans life stages

  6. Quantitative label-free phosphoproteomics of six different life stages of the late blight pathogen Phytophthora infestans reveals abundant phosphorylation of members of the CRN effector family

    NARCIS (Netherlands)

    Resjö, S.; Ali, A.; Meijer, H.J.G.; Seidl, M.F.; Snel, B.; Sandin, M.; Levander, F.; Govers, F.; Andreasson, E.

    2014-01-01

    The oomycete Phytophthora infestans is the causal agent of late blight in potato and tomato. Since the underlying processes that govern pathogenicity and development in P. infestans are largely unknown, we have performed a large-scale phosphoproteomics study of six different P. infestans life stages

  7. Biological control of late blight (Phytophthora infestans (Mont.) de Bary) in tomatoes with mycoextracts from Fusarium culmorum and Fusarium graminearum.

    Science.gov (United States)

    Cărăbet, A F; Grozea, I; Chirita, R; Badea, A M

    2008-01-01

    Following a screening completed over several species of fungus for establishing the efficiency of the extracts produced from them, against agent causing the late blight--Phytophthora infestans--two species of fungus were selected--Fusarium graminearum and Fusarium culmorum--in order to employ them and their strains with different virulence in the pathosystem fungi/Lycopersicumm esculentum. The utilized extracts are based on ethanol and obtained from mycelium and culture filtrate. Extract was applied 2 and respectively 7 days before the artificial inoculation, realized on the detached tomato's leaves and maintained at 17 degrees C and air relative humidity of 100%. The evaluation was done 6 days after the inoculation. The results show that for the treatment applied 2 days before inoculation the intensity of the attack was reduced by aprox. 60% compared with the control but for the inoculation at 7 days after the treatment, the intensity was not diminished. PMID:19226762

  8. Genetically Engineered Broad-Spectrum Disease Resistance in Tomato

    Science.gov (United States)

    Oldroyd, Giles E. D.; Staskawicz, Brian J.

    1998-08-01

    Resistance in tomato to the bacterial pathogen Pseudomonas syringae pathovar tomato requires Pto and Prf. Mutations that eliminate Prf show a loss of both Pto resistance and sensitivity to the organophosphate insecticide fenthion, suggesting that Prf controls both phenotypes. Herein, we report that the overexpression of Prf leads to enhanced resistance to a number of normally virulent bacterial and viral pathogens and leads to increased sensitivity to fenthion. These plants express levels of salicylic acid comparable to plants induced for systemic acquired resistance (SAR) and constitutively express pathogenesis related genes. These results suggest that the overexpression of Prf activates the Pto and Fen pathways in a pathogen-independent manner and leads to the activation of SAR. Transgene-induced SAR has implications for the generation of broad spectrum disease resistance in agricultural crop plants.

  9. Reduction of lesion growth rate of late blight plant disease in transgenic potato expressing harpin protein

    Institute of Scientific and Technical Information of China (English)

    李汝刚; 范云六

    1999-01-01

    Using harpin protein gene from apple fire blight pathogen Erwinia amylavora and potato prp1-1 promoter as main DNA elements, the feasibility of using pathogen infection-induced hypersensitive response was explored as a new strategy of engineering fungal disease resistance. Three plant transformation vectors were constructed and 68 transgenic potato plants were produced through Agrobacterium mediated transformation method. Southern, Northern and Western blot analysis demonstrated the insertion, transcription and protein expression of harpin protein gene in transgenic plants. Disease resistance test using a complex race of Phytophthora infestans as challenging pathogen showed that both constitutive and pathogen infection-induced expression of harpin protein gene in transgenic potato reduced the lesion growth rate of fungus. Among plants where harpin protein gene expression was induced only by fungus infection, two plants were found to be highly resistant to P. infestans infection. Fungal hyphae were not pr

  10. Changing Pattern of Crop Fraction in Late Blight Induced Potato Crops in Potato Bowl of West Bengal by using Multi-temporal Time Series AWiFs Data

    Science.gov (United States)

    Chakrabarty, Abhisek

    2016-07-01

    Crop fraction is the ratio of crop occupying a unit area in ground pixel, is very important for monitoring crop growth. One of the most important variables in crop growth monitoring is the fraction of available solar radiation intercepted by foliage. Late blight of potato (Solanum tuberosum), caused by the oomycete pathogen Phytophthora infestans, is considered to be the most destructive crop diseases of potato worldwide. Under favourable climatic conditions, and without intervention (i.e. fungicide sprays), the disease can destroy potato crop within few weeks. Therefore it is important to evaluate the crop fraction for monitoring the healthy and late blight affected potato crops. This study was conducted in potato bowl of West Bengal, which consists of districts of Hooghly, Howrah, Burdwan, Bankuara, and Paschim Medinipur. In this study different crop fraction estimation method like linear spectral un-mixing, Normalized difference vegetation index (NDVI) based DPM model (Zhang et al. 2013), Ratio vegetation index based DPM model, improved Pixel Dichotomy Model (Li et al. 2014) ware evaluated using multi-temporal IRS AWiFs data in two successive potato growing season of 2012-13 and 2013-14 over the study area and compared with measured crop fraction. The comparative study based on measured healthy and late blight affected potato crop fraction showed that improved Pixel Dichotomy Model maintain the high coefficient of determination (R2= 0.835) with low root mean square error (RMSE=0.21) whereas the correlation values of NDVI based DPM model and RVI based DPM model is 0.763 and 0.694 respectively. The changing pattern of crop fraction profile of late blight affected potato crop was studied in respect of healthy potato crop fraction which was extracted from the 269 GPS points of potato field. It showed that the healthy potato crop fraction profile maintained the normal phenological trend whereas the late blight affected potato crop fraction profile suddenly fallen

  11. Broad spectrum microarray for fingerprint-based bacterial species identification

    Directory of Open Access Journals (Sweden)

    Frey Jürg E

    2010-02-01

    Full Text Available Abstract Background Microarrays are powerful tools for DNA-based molecular diagnostics and identification of pathogens. Most target a limited range of organisms and are based on only one or a very few genes for specific identification. Such microarrays are limited to organisms for which specific probes are available, and often have difficulty discriminating closely related taxa. We have developed an alternative broad-spectrum microarray that employs hybridisation fingerprints generated by high-density anonymous markers distributed over the entire genome for identification based on comparison to a reference database. Results A high-density microarray carrying 95,000 unique 13-mer probes was designed. Optimized methods were developed to deliver reproducible hybridisation patterns that enabled confident discrimination of bacteria at the species, subspecies, and strain levels. High correlation coefficients were achieved between replicates. A sub-selection of 12,071 probes, determined by ANOVA and class prediction analysis, enabled the discrimination of all samples in our panel. Mismatch probe hybridisation was observed but was found to have no effect on the discriminatory capacity of our system. Conclusions These results indicate the potential of our genome chip for reliable identification of a wide range of bacterial taxa at the subspecies level without laborious prior sequencing and probe design. With its high resolution capacity, our proof-of-principle chip demonstrates great potential as a tool for molecular diagnostics of broad taxonomic groups.

  12. Eficiência do metalaxyl no controle da requeima do tomateiro Efficiency of Metalaxyl to control tomato late blight

    Directory of Open Access Journals (Sweden)

    Celson Rodrigues

    2000-03-01

    Full Text Available Foi avaliada a eficiência das dosagens de 1; 2,5 e 5 g/cova do fungicida Ridomil 50 gr (metalaxyl 50 g/kg, em aplicação única no solo, comparada com a dosagem de 400 g/100 litros de água do Fólio (metalaxyl + clorotalonil, 80 + 400 g/kg e do Ridomil Mancozeb br (metalaxyl + mancozeb, 80 + 640 g/kg, em dez pulverizações, para o controle da requeima do tomateiro cv. Santa Clara. O delineamento experimental foi de blocos ao acaso com seis tratamentos e quatro repetições. A percentagem de área foliar lesionada pela requeima foi de 2,75% no tratamento com Folio, 7,25% com Ridomil Mancozeb br; 18,25; 18,50 e 24,25% com as dosagens crescentes do Ridomil 50 gr, e 34,25% com a ausência de tratamento com fungicidas (testemunha. A produção de frutos comercialmente aceitáveis por dez plantas de tomateiro, avaliadas em cada parcela experimental, durante quatro semanas a partir de 90 dias do transplantio do tomateiro foi de 10,26 kg para o tratamento com o Folio, 9,10 kg para o Ridomil Mancozeb br, 2,07 kg; 1,86 e 1,74 kg para as dosagens crescentes do Ridomil 50 gr, enquanto para a testemunha foi de 1,58 kg. Estes resultados demonstraram a superioridade dos fungicidas Folio e Ridomil Mancozeb br em relação ao Ridomil 50 gr, para o controle da requeima do tomateiro, nas condições experimentais utilizadas.An experiment was conducted to study the efficiency of the dosages of 1; 2.5 and 5 g/plant, of the fungicide ridomil 50 gr (metalaxyl, 50 g/kg, in only one application in the soil, compared with the dosage of 400 g/100 liters of water, of the folio (metalaxyl + chlorothalonil, 80 + 400 g/kg and of the ridomil mancozeb br (metalaxyl + mancozeb, 80 + 640 g/kg, in ten pulverizations for the control of the late blight of the tomato cv. Santa Clara. The experiments were set up in a complete randomized design, with six treatments and four replications. The percentage of the damaged foliage area caused by late blight was of 2.75% in the treatment

  13. A Farm Information Model for Development and Configuration of Interoperable ICT Components to support Collaborative Business Processes – a case of late blight protection

    OpenAIRE

    Kruize, Jan Willem; Goense, Daan; Wolfert, Sjaak; Verdouw, Cor N.; Scholten, Huub; Beulens, Adrie J.M.

    2015-01-01

    Farm enterprises2 The objective of this paper is to describe a farm information model and a proof of concept that demonstrates how a collaborative Business Process for farming can be configured using this farm information model. Knowledge to develop this model and a proof of concept is obtained by case study research focusing on the collaborative Business Processes of spraying and crop protection of potatoes against late blight disease. need to collaborate with numerous actors that are part o...

  14. The relationship between anatomical and morphological characteristics of green tomato fruit and their susceptibility to late blight (Phytophthora infestans (Mont. de Bary

    Directory of Open Access Journals (Sweden)

    Elżbieta Horodecka

    2013-12-01

    Full Text Available The purpose of the studies carried out in 1983-1985 was to determine the relationships between the degree of susceptibility of green tomato fruit to late blight and several of the anatomical and morphological features of these fruits. It was found that in the studied material representing a wide range of susceptibility (from various degrees of resistance to susceptible the extent of infection was dependent on the covering layer thickness (with cuticle and number of hairs on the skin.

  15. Broad-spectrum light versus blue light for phototherapy in neonatal hyperbilirubinemia: a randomized controlled trial.

    Science.gov (United States)

    Pratesi, Simone; Di Fabio, Sandra; Bresci, Cecilia; Di Natale, Cecilia; Bar, Shahar; Dani, Carlo

    2015-07-01

    Phototherapy is standard care for treatment of neonatal hyperbilirubinemia. Our aim was to compare the effectiveness of broad-spectrum light (BSL) to that of blue light emitting diodes (LED) phototherapy for the treatment of jaundiced late preterm and term infants. Infants with gestational age from 35(+0) to 41(+6) weeks of gestation and nonhemolytic hyperbilirubinemia were randomized to treatment with BSL phototherapy or blue LED phototherapy. A total of 20 infants were included in the blue LED phototherapy group and 20 in the BSL phototherapy group. The duration of phototherapy was lower in the BSL than in the blue LED phototherapy group (15.8 ± 4.9 vs. 20.6 ± 6.0 hours; p = 0.009), and infants in the former group had a lower probability (p = 0.015) of remaining in phototherapy than infants in the latter. We concluded that BSL phototherapy is more effective than blue LED phototherapy for the treatment of hyperbilirubinemia in late preterm and term infants. Our data suggest that these results are not due to the different irradiance of the two phototherapy systems, but probably depend on their different peak light emissions. PMID:25545446

  16. Population Structure of the Late Blight Pathogen Phytophthora infestans in a Potato Germplasm Nursery in Two Consecutive Years.

    Science.gov (United States)

    Tian, Yuee; Yin, Junliang; Sun, Jieping; Ma, Hongmei; Ma, Yunfang; Quan, Junli; Shan, Weixing

    2015-06-01

    As the causal agent of late blight on potato, Phytophthora infestans is one of the most destructive plant pathogens worldwide and widely known as the Irish potato famine pathogen. Understanding the genetic structure of P. infestans populations is important both for breeding and deployment of resistant varieties and for development of disease control strategies. Here, we investigate the population genetic structure of P. infestans in a potato germplasm nursery in northwestern China. In total, 279 isolates were recovered from 63 potato varieties or lines in 2010 and 2011, and were genotyped by mitochondrial DNA haplotypes and a set of nine simple-sequence repeat markers. Selected isolates were further examined for virulence on a set of differential lines containing each resistance (R) gene (R1 to R11). The overall P. infestans population was characterized as having a low level of genetic diversity and resistance to metalaxyl, and containing a high percentage of individuals that virulent to all 11 R genes. Both A1 and A2 mating types as well as self-fertile P. infestans isolates were present but there was no evidence of sexual reproduction. The low level of genetic differentiation in P. infestans populations is probably due to the action of relatively high levels of migration as supported by analysis of molecular variance (P < 0.01). Migration and asexual reproduction were the predominant mechanisms influencing the P. infestans population structure in the germplasm nursery. Therefore, it is important to ensure the production of pathogen-free potato seed tubers to aid sustainable production of potato in northwestern China. PMID:25738550

  17. Conception of Philosophy Given in Broad-Spectrum Philosophy and its Significance

    Directory of Open Access Journals (Sweden)

    Miao Su

    2013-01-01

    Full Text Available In this study, we have a research of the conception of philosophy given in broad-spectrum philosophy and its significance. “What’s philosophy” is a question at once ancient and new and regarding this question, different philosophical schools or philosophers have different answers. Based on a summary of modern scientific achievements, Broad-spectrum Philosophy gives this matter a new solution. What this thesis concerns includes the theoretical basis of the solution and the significance of it. As a research result, we clearly describe the conception of philosophy given in broad-spectrum philosophy and show the significance of this field.

  18. Pyrodiversity and the anthropocene: the role of fire in the broad spectrum revolution.

    Science.gov (United States)

    Bird, Douglas W; Bliege Bird, Rebecca; Codding, Brian F

    2016-05-01

    The Anthropocene colloquially refers to a global regime of human-caused environmental modification of earth systems associated with profound changes in patterns of human mobility, as well as settlement and resource use compared with prior eras. Some have argued that the processes generating the Anthropocene are mainly associated with population growth and technological innovation, and thus began only in the late Holocene under conditions of dense sedentism and industrial agriculture.(1) However, it now seems clear that the roots of the Anthropocene lie in complex processes of intensification that significantly predate transitions to agriculture.(2,3) What intensification is remains less clear. For some it is increasing economic productivity that increases carrying capacity, the drivers of which may be too diverse and too local to generalize.(4,5) For others using Boserup's ideas about agrarian intensification, increasing density in hunter-gatherer populations can produce declines in subsistence efficiency that increase incentives for investing labor to boost yield per unit area, which then elevates Malthusian limits on carrying capacity.(6-8) As Morgan(9) demonstrates in a comprehensive review, the legacy of such Boserupian intensification is alive, well, and controversial in hunter-gatherer archeology. This is a result of its potential for illuminating processes involved in transformations of forager socio-political and economic systems, including those dominated by harvesting more immediate-return resources and high residential mobility as well as those characterized by more delayed-return material economies with reduced residential mobility, a broader spectrum of resources, degrees of storage, and greater social stratification. Here we detail hypotheses about the processes involved in such transitions and explore the way that anthropogenic disturbance of ecosystems, especially the use of landscape fire, could be fundamentally entangled with many broad-spectrum

  19. Reassessment of QTLs for late blight resistance in the tomato accession L3708 using a restriction site associated DNA (RAD linkage map and highly aggressive isolates of Phytophthora infestans.

    Directory of Open Access Journals (Sweden)

    Ai-Lin Chen

    Full Text Available Tomato late blight caused by the oomycete pathogen Phytophthora infestans (Mont. de Bary is a major threat to tomato production in cool and wet environments. Intensified outbreaks of late blight have been observed globally from the 1980s, and are associated with migration of new and more aggressive populations of P. infestans in the field. The objective of this study was to reassess late blight resistance in the wild tomato accession L3708 (Solanum pimpinellifolium L. against pathogens of different aggressiveness. An F2:3 genetic mapping population was developed using L3708 as the paternal parent. Two isolates of P. infestans, Pi39A and Pi733, were used for inoculation. Pi733 is a highly aggressive genotype that defeats three known late blight resistance genes, Ph-1, Ph-2, and Ph-5t in tomato. In contrast, Pi39A is a less aggressive genotype that defeats only Ph-1. Restriction site Associated DNA Sequencing (RAD-Seq technology was used to massively sequence 90 bp nucleotides adjacent to both sides of PstI restriction enzyme cutting sites in the genome for all individuals in the genetic mapping population. The RAD-seq data were used to construct a genetic linkage map containing 440 single nucleotide polymorphism markers. Quantitative trait locus (QTL analysis identified a new disease-resistant QTL specific to Pi733 on chromosome 2. The Ph-3 gene located on chromosome 9 could be detected whichever isolates were used. This study demonstrated the feasibility and efficiency of RAD-Seq technology for conducting a QTL mapping experiment using an F2:3 mapping population, which allowed the identification of a new late blight resistant QTL in tomato.

  20. Are Broad-Spectrum Fluoroquinolones More Likely To Cause Clostridium difficile-Associated Disease?

    OpenAIRE

    Dhalla, Irfan A.; Muhammad M Mamdani; Simor, Andrew E; Kopp, Alex; Rochon, Paula A; Juurlink, David N.

    2006-01-01

    Limited evidence suggests that broad-spectrum fluoroquinolones such as gatifloxacin and moxifloxacin are more likely to cause Clostridium difficile-associated disease than levofloxacin. In a population-based case-control study of outpatients prescribed fluoroquinolones, we found no increased risk of C. difficile-associated disease requiring hospitalization among patients prescribed gatifloxacin or moxifloxacin compared to levofloxacin.

  1. Resistance of nanobacteria isolated from urinary and kidney stones to broad-spectrum antibiotics.

    Directory of Open Access Journals (Sweden)

    Hadi Sardarabadi

    2014-08-01

    Full Text Available Nanoscopic life forms called Nanobacteria or calcifying nanoparticles (CNP are unconventional agents. These novel organisms are very small (0.1 to 0.5 microns and possess unusual properties such as high resistance to heat and routine antimicrobial agents. Nanobacteria are 100 times smaller than bacteria and protected by a shell of apatite, so they could be as candidate for emerging and progress of in vivo pathological calcification. In this study, the inhibitory effect of broad-spectrum antibiotics on growth of these new forms of life has been investigated.Powdered urinary and kidney stones were demineralized with HCl and neutralized with appropriate buffers and became filtered. Finally suspension was incubated in DMEM medium with Fetal Bovine Serum (FBS and broad-spectrum antibiotics (100U/ml for penicillin and 100μg/ml for streptomycin for 60 days.In the presence of broad-spectrum antibiotics, Scanning Electron Micrographs (SEM showed a spherical shape of these nanobacteria. Also, Energy Dispersive X-ray spectroscopy (EDS showed a pick for calcium and phosphor. Transmission Electron Microscopy (TEM results illustrated cover around the nanobacteria.The growth of calcifying nanoparticles after adding the broad-spectrum antibiotics may be due to their apatite hard shells supporting them against penetration of the antibiotics.

  2. Draft Genome Sequence of the Broad-Spectrum Xenobiotic Degrader Achromobacter xylosoxidans ADAF13.

    Science.gov (United States)

    Iyer, Rupa; Damania, Ashish

    2016-01-01

    Achromobacter xylosoxidansADAF13, isolated from farmland soil, possesses a large number of putative degradation genes and pathways that break down a wide variety of aromatic hydrocarbons, pesticides, endocrine disruptors, and other high-impact xenobiotics. These properties make this strain an excellent candidate for further development as a broad-spectrum bioremediation agent. PMID:27081123

  3. Draft Genome Sequence of the Broad-Spectrum Xenobiotic Degrader Achromobacter xylosoxidans ADAF13

    OpenAIRE

    Iyer, Rupa; Damania, Ashish

    2016-01-01

    Achromobacter xylosoxidans ADAF13, isolated from farmland soil, possesses a large number of putative degradation genes and pathways that break down a wide variety of aromatic hydrocarbons, pesticides, endocrine disruptors, and other high-impact xenobiotics. These properties make this strain an excellent candidate for further development as a broad-spectrum bioremediation agent.

  4. Synthesis and Broad-Spectrum Antiviral Activity of Some Novel Benzo-Heterocyclic Amine Compounds

    Directory of Open Access Journals (Sweden)

    Da-Jun Zhang

    2014-01-01

    Full Text Available A series of novel unsaturated five-membered benzo-heterocyclic amine derivatives were synthesized and assayed to determine their in vitro broad-spectrum antiviral activities. The biological results showed that most of our synthesized compounds exhibited potent broad-spectrum antiviral activity. Notably, compounds 3f (IC50 = 3.21–5.06 μM and 3g (IC50 = 0.71–34.87 μM showed potent activity towards both RNA viruses (influenza A, HCV and Cox B3 virus and a DNA virus (HBV at low micromolar concentrations. An SAR study showed that electron-withdrawing substituents located on the aromatic or heteroaromatic ring favored antiviral activity towards RNA viruses.

  5. The Discussion about Truth Viewpoint and its Significance on the View of Broad-Spectrum Philosophy

    Directory of Open Access Journals (Sweden)

    Facheng Shang

    2012-11-01

    Full Text Available In this study, we have a discussion about truth viewpoint and its significance on the view of Broad-spectrum Philosophy, which inherit and develop the truth of Marxist philosophy Broad-spectrum. Philosophy provides a unique perspective; it introduces the concept of observocontrol mode, which regards the truth as an image in the equivalence class. By changing the observocontrol mode, it reveals “Multilobe” of the truth of the same objective. To answer the question on "how to test the truth", it constructs the procedures and criteria to knowledge the truth. These researches have an important revelation on the enrichment and development of the study of Marxism truth theory.

  6. Squalamine as a broad-spectrum systemic antiviral agent with therapeutic potential.

    Science.gov (United States)

    Zasloff, Michael; Adams, A Paige; Beckerman, Bernard; Campbell, Ann; Han, Ziying; Luijten, Erik; Meza, Isaura; Julander, Justin; Mishra, Abhijit; Qu, Wei; Taylor, John M; Weaver, Scott C; Wong, Gerard C L

    2011-09-20

    Antiviral compounds that increase the resistance of host tissues represent an attractive class of therapeutic. Here, we show that squalamine, a compound previously isolated from the tissues of the dogfish shark (Squalus acanthias) and the sea lamprey (Petromyzon marinus), exhibits broad-spectrum antiviral activity against human pathogens, which were studied in vitro as well as in vivo. Both RNA- and DNA-enveloped viruses are shown to be susceptible. The proposed mechanism involves the capacity of squalamine, a cationic amphipathic sterol, to neutralize the negative electrostatic surface charge of intracellular membranes in a way that renders the cell less effective in supporting viral replication. Because squalamine can be readily synthesized and has a known safety profile in man, we believe its potential as a broad-spectrum human antiviral agent should be explored. PMID:21930925

  7. Broad-Spectrum Antimicrobial Epiphytic and Endophytic Fungi from Marine Organisms: Isolation, Bioassay and Taxonomy

    Directory of Open Access Journals (Sweden)

    Yan-Hua Zhu

    2009-04-01

    Full Text Available In the search for new marine derived antibiotics, 43 epi- and endophytic fungal strains were isolated from the surface or the inner tissue of different marine plants and invertebrates. Through preliminary and secondary screening, 10 of them were found to be able to produce broad-spectrum antimicrobial metabolites. By morphological and molecular biological methods, three active strains were characterized to be Penicillium glabrum, Fusarium oxysporum, and Alternaria alternata.

  8. Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

    DEFF Research Database (Denmark)

    Taylor, Jenny C; Martin, Hilary C; Lise, Stefano; Broxholme, John; Cazier, Jean-Baptiste; Rimmer, Andy; Kanapin, Alexander; Lunter, Gerton; Fiddy, Simon; Allan, Chris; Aricescu, A Radu; Attar, Moustafa; Babbs, Christian; Becq, Jennifer; Beeson, David; Bento, Celeste; Bignell, Patricia; Blair, Edward; Buckle, Veronica J; Bull, Katherine; Cais, Ondrej; Cario, Holger; Chapel, Helen; Copley, Richard R; Cornall, Richard; Craft, Jude; Dahan, Karin; Davenport, Emma E; Dendrou, Calliope; Devuyst, Olivier; Fenwick, Aimée L; Flint, Jonathan; Fugger, Lars; Gilbert, Rodney D; Goriely, Anne; Green, Angie; Greger, Ingo H; Grocock, Russell; Gruszczyk, Anja V; Hastings, Robert; Hatton, Edouard; Higgs, Doug; Hill, Adrian; Holmes, Chris; Howard, Malcolm; Hughes, Linda; Humburg, Peter; Johnson, David; Karpe, Fredrik; Kingsbury, Zoya; Kini, Usha; Knight, Julian C; Krohn, Jonathan; Lamble, Sarah; Langman, Craig; Lonie, Lorne; Luck, Joshua; McCarthy, Davis; McGowan, Simon J; McMullin, Mary Frances; Miller, Kerry A; Murray, Lisa; Németh, Andrea H; Nesbit, M Andrew; Nutt, David; Ormondroyd, Elizabeth; Oturai, Annette Bang; Pagnamenta, Alistair; Patel, Smita Y; Percy, Melanie; Petousi, Nayia; Piazza, Paolo; Piret, Sian E; Polanco-Echeverry, Guadalupe; Popitsch, Niko; Powrie, Fiona; Pugh, Chris; Quek, Lynn; Robbins, Peter A; Robson, Kathryn; Russo, Alexandra; Sahgal, Natasha; van Schouwenburg, Pauline A; Schuh, Anna; Silverman, Earl; Simmons, Alison; Sørensen, Per Soelberg; Sweeney, Elizabeth; Taylor, John; Thakker, Rajesh V; Tomlinson, Ian; Trebes, Amy; Twigg, Stephen R F; Uhlig, Holm H; Vyas, Paresh; Vyse, Tim; Wall, Steven A; Watkins, Hugh; Whyte, Michael P; Witty, Lorna; Wright, Ben; Yau, Chris; Buck, David; Humphray, Sean; Ratcliffe, Peter J; Bell, John I; Wilkie, Andrew O M; Bentley, David; Donnelly, Peter; McVean, Gilean

    2015-01-01

    To assess factors influencing the success of whole-genome sequencing for mainstream clinical diagnosis, we sequenced 217 individuals from 156 independent cases or families across a broad spectrum of disorders in whom previous screening had identified no pathogenic variants. We quantified the number...... of candidate variants identified using different strategies for variant calling, filtering, annotation and prioritization. We found that jointly calling variants across samples, filtering against both local and external databases, deploying multiple annotation tools and using familial transmission...

  9. Squalamine as a broad-spectrum systemic antiviral agent with therapeutic potential

    OpenAIRE

    Zasloff, Michael; Adams, A. Paige; Beckerman, Bernard; Campbell, Ann; Han, Ziying; Luijten, Erik; Meza, Isaura; Julander, Justin; Mishra, Abhijit; Qu, Wei; Taylor, John M; Scott C Weaver; Wong, Gerard C. L.

    2011-01-01

    Antiviral compounds that increase the resistance of host tissues represent an attractive class of therapeutic. Here, we show that squalamine, a compound previously isolated from the tissues of the dogfish shark (Squalus acanthias) and the sea lamprey (Petromyzon marinus), exhibits broad-spectrum antiviral activity against human pathogens, which were studied in vitro as well as in vivo. Both RNA- and DNA-enveloped viruses are shown to be susceptible. The proposed mechanism involves the capacit...

  10. Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

    OpenAIRE

    Taylor, Jenny C; Martin, Hilary C.; Lise, Stefano; Broxholme, John; Cazier, Jean-Baptiste; Rimmer, Andy; Kanapin, Alexander; Lunter, Gerton; Fiddy, Simon; Allan, Chris; Aricescu, A. Radu; Attar, Moustafa; Babbs, Christian; Becq, Jennifer; Beeson, David

    2015-01-01

    To assess factors influencing the success of whole genome sequencing for mainstream clinical diagnosis, we sequenced 217 individuals from 156 independent cases across a broad spectrum of disorders in whom prior screening had identified no pathogenic variants. We quantified the number of candidate variants identified using different strategies for variant calling, filtering, annotation and prioritisation. We found that jointly calling variants across samples, filtering against both local and e...

  11. Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays

    OpenAIRE

    Lin, Baochuan; Wang, Zheng; Vora, Gary J.; Jennifer A. Thornton; Schnur, Joel M.; Thach, Dzung C.; Blaney, Kate M.; Ligler, Adam G.; Malanoski, Anthony P.; Santiago, Jose; Walter, Elizabeth A.; Agan, Brian K.; Metzgar, David; Seto, Donald; Daum, Luke T.

    2006-01-01

    The exponential growth of pathogen nucleic acid sequences available in public domain databases has invited their direct use in pathogen detection, identification, and surveillance strategies. DNA microarray technology has offered the potential for the direct DNA sequence analysis of a broad spectrum of pathogens of interest. However, to achieve the practical attainment of this potential, numerous technical issues, especially nucleic acid amplification, probe specificity, and interpretation st...

  12. Emerging broad-spectrum resistance in Pseudomonas aeruginosa and Acinetobacter baumannii: Mechanisms and epidemiology

    OpenAIRE

    Potron, Anaïs; Poirel , Laurent; Nordmann, Patrice

    2015-01-01

    Multidrug resistance is quite common among non-fermenting Gram-negative rods, in particular among clinically relevant species including Pseudomonas aeruginosa and Acinetobacter baumannii. These bacterial species, which are mainly nosocomial pathogens, possess a diversity of resistance mechanisms that may lead to multidrug or even pandrug resistance. Extended-spectrum β-lactamases (ESBLs) conferring resistance to broad-spectrum cephalosporins, carbapenemases conferring resistance to carbapenem...

  13. Controle da requeima em tomateiro industrial com fungicidas e silicato de potássio Control of late blight in industrial tomato with fungicide and potassium silicate

    Directory of Open Access Journals (Sweden)

    Henrique S.S. Duarte

    2007-06-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito da aplicação de fungicidas e silicato de potássio, no controle da requeima (Phytophthora infestans, em tomateiro industrial. Os fungicidas foram aplicados com base no sistema de previsão de Wallin e calendário fixo de pulverizações. Empregou-se o delineamento em blocos casualizados com 6 tratamentos e 4 repetições. Os tratamentos (T foram: T1 - testemunha; T2 - dimetomorfe + clorotalonil (valores de severidade da doença (VSD = 10 + metiram; T3 - metalaxil-M + clorotalonil (VSD = 10 + metiram (o metiram foi aplicado somente na semana onde o VSD não atingiu o valor requerido para o tratamento; T4 - calendário fixo: dimetomorfe + clorotalonil, mancozeb, metalaxil-M + clorotalonil e clorotalonil, alternados semanalmente; T5 - silicato de potássio (5 g/L e T6 - silicato de potássio (15 g/L. A severidade foi avaliada utilizando-se uma escala descritiva variando de 0 a 100 %. A severidade final foi: 100; 2,6; 12,3; 5,5; 97,6 e 96 %, respectivamente, nos tratamentos T1, T2, T3, T4, T5 e T6. A severidade foi em média, 93 % menor nos tratamentos que receberam aplicações de fungicidas em relação a testemunha. Dentre os tratamentos que empregaram sistema de previsão o 2 apresentou melhor resultado do que o 3. O tratamento 2 apresentou eficiência comparável ao calendário semanal (tratamento 4, apresentando produtividades de 62.103,73 e 52.473,33 kg/ha, respectivamente, sendo superiores aos demais tratamentos. Aplicações de silicato de potássio nas duas doses testadas não diferiram significativamente da testemunha, indicando a ineficiência do produto em controlar a requeima.The aim of this study was to test the effect of fungicides and potassium silicate sprays on the control of late blight (Phytophthora infestans of industrial tomato. The fungicides were applied according to the Wallin forecast system (FS and on the weekly calendar. The experiment was carried out in a completely

  14. Targeting an Essential GTPase Obg for the Development of Broad-Spectrum Antibiotics.

    Science.gov (United States)

    Bonventre, Josephine A; Zielke, Ryszard A; Korotkov, Konstantin V; Sikora, Aleksandra E

    2016-01-01

    A promising new drug target for the development of novel broad-spectrum antibiotics is the highly conserved small GTPase Obg (YhbZ, CgtA), a protein essential for the survival of all bacteria including Neisseria gonorrhoeae (GC). GC is the agent of gonorrhea, a prevalent sexually transmitted disease resulting in serious consequences on reproductive and neonatal health. A preventive anti-gonorrhea vaccine does not exist, and options for effective antibiotic treatments are increasingly limited. To address the dire need for alternative antimicrobial strategies, we have designed and optimized a 384-well GTPase assay to identify inhibitors of Obg using as a model Obg protein from GC, ObgGC. The assay was validated with a pilot screen of 40,000 compounds and achieved an average Z' value of 0.58 ± 0.02, which suggests a robust assay amenable to high-throughput screening. We developed secondary assessments for identified lead compounds that utilize the interaction between ObgGC and fluorescent guanine nucleotide analogs, mant-GTP and mant-GDP, and an ObgGC variant with multiple alterations in the G-domains that prevent nucleotide binding. To evaluate the broad-spectrum potential of ObgGC inhibitors, Obg proteins of Klebsiella pneumoniae and methicillin-resistant Staphylococcus aureus were assessed using the colorimetric and fluorescence-based activity assays. These approaches can be useful in identifying broad-spectrum Obg inhibitors and advancing the therapeutic battle against multidrug resistant bacteria. PMID:26848972

  15. Alternaria blight

    Science.gov (United States)

    Alternaria blight of chickpea is caused by the fungal pathogen Alternaria alternata. The pathogen has wide host range, and affects all above ground parts of the plant. The disease occurs sporadically and occasionally could be economically important and causes significant damage. The pathogen can ...

  16. Manejo da requeima do tomateiro industrial empregando sistema de previsão Management of industrial tomato late blight using prediction system

    Directory of Open Access Journals (Sweden)

    Henrique da Silva Silveira Duarte

    2007-12-01

    ário da requeima. O sistema de previsão baseado no uso de dimetomorfe misturado com clorotalonil alternado com metiram (VSD = 10 permitiu redução de uma aplicação da mistura dimetomorfe misturado com clorotalonil pulverização em dois dos três experimentos, comparados ao tratamento calendário semanal de aplicação de fungicidas, sem afetar a produção.Three experiments were carried out using an industrial tomato hybrid H 7155N crop, in 2003 and 2004 seasons to fit a modified prediction system, which allows the criterious use of fungicides for the control of late blight caused by Phytophthora infestans. Trials were conducted in a randomized complete block design with ten treatments and three replications. The formulated systemic fungicides were applied when the disease severity values (DSV reached eight, ten or twelve points. On weeks where DSV's values were lower than eight, ten or twelve, metiram was applied. The traditional late blight control consisted of weekly application of fungicides after the first symptoms disease, and those defined by the prediction system were carried out based on the DSV's accumulated throughout the experiment. Late blight severity was assessed weekly by using a descriptive key and diagrammatic scale. The efficiency of the control treatments was compared by the area under the disease progress curve, disease progress rate (r and tomato yield. The r values of the best treatment (dimethomorph + chlorothalonil, DSV = 10, alternated with metiram, weekly application calendar fungicides and the check treatment varied from 0.03 to 0.07, 0.05 to 0.09 and 0.24 to 0.39, respectively. Dimethomorph + chlorothalonil DSV = 10 alternated with metiram was the most efficient and yielded more than 15,7 ton of tomato in average, above the weekly spraying calendar fungicides. Dimethomorph or metalaxyl-M mixtured with chlorothalonil (DSV = 10 based on the prediction scheme without alternation with metiram differed from the weekly spraying calendar

  17. Broad spectrum antiviral activity of favipiravir (T-705: protection from highly lethal inhalational Rift Valley Fever.

    Directory of Open Access Journals (Sweden)

    Amy L Caroline

    2014-04-01

    Full Text Available BACKGROUND: Development of antiviral drugs that have broad-spectrum activity against a number of viral infections would be of significant benefit. Due to the evolution of resistance to currently licensed antiviral drugs, development of novel anti-influenza drugs is in progress, including Favipiravir (T-705, which is currently in human clinical trials. T-705 displays broad-spectrum in vitro activity against a number of viruses, including Rift Valley Fever virus (RVFV. RVF is an important neglected tropical disease that causes human, agricultural, and economic losses in endemic regions. RVF has the capacity to emerge in new locations and also presents a potential bioterrorism threat. In the current study, the in vivo efficacy of T-705 was evaluated in Wistar-Furth rats infected with the virulent ZH501 strain of RVFV by the aerosol route. METHODOLOGY/PRINCIPAL FINDINGS: Wistar-Furth rats are highly susceptible to a rapidly lethal disease after parenteral or inhalational exposure to the pathogenic ZH501 strain of RVFV. In the current study, two experiments were performed: a dose-determination study and a delayed-treatment study. In both experiments, all untreated control rats succumbed to disease. Out of 72 total rats infected with RVFV and treated with T-705, only 6 succumbed to disease. The remaining 66 rats (92% survived lethal infection with no significant weight loss or fever. The 6 treated rats that succumbed survived significantly longer before succumbing to encephalitic disease. CONCLUSIONS/SIGNIFICANCE: Currently, there are no licensed antiviral drugs for treating RVF. Here, T-705 showed remarkable efficacy in a highly lethal rat model of Rift Valley Fever, even when given up to 48 hours post-infection. This is the first study to show protection of rats infected with the pathogenic ZH501 strain of RVFV. Our data suggest that T-705 has potential to be a broad-spectrum antiviral drug.

  18. An atypical kinase under balancing selection confers broad-spectrum disease resistance in Arabidopsis.

    Directory of Open Access Journals (Sweden)

    Carine Huard-Chauveau

    Full Text Available The failure of gene-for-gene resistance traits to provide durable and broad-spectrum resistance in an agricultural context has led to the search for genes underlying quantitative resistance in plants. Such genes have been identified in only a few cases, all for fungal or nematode resistance, and encode diverse molecular functions. However, an understanding of the molecular mechanisms of quantitative resistance variation to other enemies and the associated evolutionary forces shaping this variation remain largely unknown. We report the identification, map-based cloning and functional validation of QRX3 (RKS1, Resistance related KinaSe 1, conferring broad-spectrum resistance to Xanthomonas campestris (Xc, a devastating worldwide bacterial vascular pathogen of crucifers. RKS1 encodes an atypical kinase that mediates a quantitative resistance mechanism in plants by restricting bacterial spread from the infection site. Nested Genome-Wide Association mapping revealed a major locus corresponding to an allelic series at RKS1 at the species level. An association between variation in resistance and RKS1 transcription was found using various transgenic lines as well as in natural accessions, suggesting that regulation of RKS1 expression is a major component of quantitative resistance to Xc. The co-existence of long lived RKS1 haplotypes in A. thaliana is shared with a variety of genes involved in pathogen recognition, suggesting common selective pressures. The identification of RKS1 constitutes a starting point for deciphering the mechanisms underlying broad spectrum quantitative disease resistance that is effective against a devastating and vascular crop pathogen. Because putative RKS1 orthologous have been found in other Brassica species, RKS1 provides an exciting opportunity for plant breeders to improve resistance to black rot in crops.

  19. 5-Carboxy-8-hydroxyquinoline is a Broad Spectrum 2-Oxoglutarate Oxygenase Inhibitor which Causes Iron Translocation

    OpenAIRE

    Hopkinson, Richard J.; Tumber, Anthony; Yapp, Clarence; Chowdhury, Rasheduzzaman; Aik, WeiShen; Che, Ka Hing; Li, Xuan Shirley; Kristensen, Jan B. L.; King, Oliver N.F.; Chan, Mun Chiang; Yeoh, Kar Kheng; Choi, Hwanho; Walport, Louise J.; Thinnes, Cyrille C.; Bush, Jacob T

    2013-01-01

    2-Oxoglutarate and iron dependent oxygenases are therapeutic targets for human diseases. Using a representative 2OG oxygenase panel, we compare the inhibitory activities of 5-carboxy-8-hydroxyquinoline (IOX1) and 4-carboxy-8-hydroxyquinoline (4C8HQ) with that of two other commonly used 2OG oxygenase inhibitors, N-oxalylglycine (NOG) and 2,4-pyridinedicarboxylic acid (2,4-PDCA). The results reveal that IOX1 has a broad spectrum of activity, as demonstrated by the inhibition of transcription fa...

  20. Inhibitors of cellular kinases with broad-spectrum antiviral activity for hemorrhagic fever viruses.

    Science.gov (United States)

    Mohr, Emma L; McMullan, Laura K; Lo, Michael K; Spengler, Jessica R; Bergeron, Éric; Albariño, César G; Shrivastava-Ranjan, Punya; Chiang, Cheng-Feng; Nichol, Stuart T; Spiropoulou, Christina F; Flint, Mike

    2015-08-01

    Host cell kinases are important for the replication of a number of hemorrhagic fever viruses. We tested a panel of kinase inhibitors for their ability to block the replication of multiple hemorrhagic fever viruses. OSU-03012 inhibited the replication of Lassa, Ebola, Marburg and Nipah viruses, whereas BIBX 1382 dihydrochloride inhibited Lassa, Ebola and Marburg viruses. BIBX 1382 blocked both Lassa and Ebola virus glycoprotein-dependent cell entry. These compounds may be used as tools to understand conserved virus-host interactions, and implicate host cell kinases that may be targets for broad spectrum therapeutic intervention. PMID:25986249

  1. Broad-spectrum sun-protective action of Porphyra-334 derived from Porphyra vietnamensis

    OpenAIRE

    Saurabh Bhatia; Sharma, K.; Namdeo, Ajay G.; B B Chaugule; Kavale, M.; Nanda, S

    2010-01-01

    There are enormous UV-protective compounds present in the current world market, out of which 98% give protection against UV-B range and the remaining 2% are potent against far UV-A range only. Furthermore, these synthetic compounds have various problems related to photo-stability and cross-stability. There is a vital need of sunscreen agents that will remain stable for prolonged periods and provide broad-spectrum protection against harmful UV range. The Indian Ocean contains large amounts of ...

  2. Nanomedicine for Infectious Disease Applications: Innovation towards Broad-Spectrum Treatment of Viral Infections.

    Science.gov (United States)

    Jackman, Joshua A; Lee, Jaywon; Cho, Nam-Joon

    2016-03-01

    Nanomedicine enables unique diagnostic and therapeutic capabilities to tackle problems in clinical medicine. As multifunctional agents with programmable properties, nanomedicines are poised to revolutionize treatment strategies. This promise is especially evident for infectious disease applications, for which the continual emergence, re-emergence, and evolution of pathogens has proven difficult to counter by conventional approaches. Herein, a conceptual framework is presented that envisions possible routes for the development of nanomedicines as superior broad-spectrum antiviral agents against enveloped viruses. With lipid membranes playing a critical role in the life cycle of medically important enveloped viruses including HIV, influenza, and Ebola, cellular and viral membrane interfaces are ideal elements to incorporate into broad-spectrum antiviral strategies. Examples are presented that demonstrate how nanomedicine strategies inspired by lipid membranes enable a wide range of targeting opportunities to gain control of critical stages in the virus life cycle through either direct or indirect approaches involving membrane interfaces. The capabilities can be realized by enabling new inhibitory functions or improving the function of existing drugs through nanotechnology-enabled solutions. With these exciting opportunities, due attention is also given to the clinical translation of nanomedicines for infectious disease applications, especially as pharmaceutical drug-discovery pipelines demand new routes of innovation. PMID:26551316

  3. Vancomycin and Five Broad-spectrum Antibiotic Utilization Evaluation in an Educational Medical Center in One Year

    OpenAIRE

    SiminDokht Shoaei; Aliasghar Bagherzadeh; Mehrdad Haghighi; Meinoosh Shabani

    2015-01-01

     Background: Antibiotics can be life saving if they are used correctly, and can have unwanted side effects specially resistance with incorrect use. Unfortunately in fear of no response, physicians use broad spectrum antibiotics meticulously. In this Drug Utilization Evaluation (DUE), improper use of Vancomycin and five broad-spectrum antibiotics are studied to find faults and solution for this problem. Methods:This descriptive cross-sectional study performed during the March of 2012 to March ...

  4. The receptor-like kinase SERK3/BAK1 is required for basal resistance against the late blight pathogen phytophthora infestans in Nicotiana benthamiana.

    Directory of Open Access Journals (Sweden)

    Angela Chaparro-Garcia

    Full Text Available BACKGROUND: The filamentous oomycete plant pathogen Phytophthora infestans causes late blight, an economically important disease, on members of the nightshade family (Solanaceae, such as the crop plants potato and tomato. The related plant Nicotiana benthamiana is a model system to study plant-pathogen interactions, and the susceptibility of N. benthamiana to Phytophthora species varies from susceptible to resistant. Little is known about the extent to which plant basal immunity, mediated by membrane receptors that recognise conserved pathogen-associated molecular patterns (PAMPs, contributes to P. infestans resistance. PRINCIPAL FINDINGS: We found that different species of Phytophthora have varying degrees of virulence on N. benthamiana ranging from avirulence (incompatible interaction to moderate virulence through to full aggressiveness. The leucine-rich repeat receptor-like kinase (LRR-RLK BAK1/SERK3 is a major modulator of PAMP-triggered immunity (PTI in Arabidopsis thaliana and N. benthamiana. We cloned two NbSerk3 homologs, NbSerk3A and NbSerk3B, from N. benthamiana based on sequence similarity to the A. thaliana gene. N. benthamiana plants silenced for NbSerk3 showed markedly enhanced susceptibility to P. infestans infection but were not altered in resistance to Phytophthora mirabilis, a sister species of P. infestans that specializes on a different host plant. Furthermore, silencing of NbSerk3 reduced the cell death response triggered by the INF1, a secreted P. infestans protein with features of PAMPs. CONCLUSIONS/SIGNIFICANCE: We demonstrated that N. benthamiana NbSERK3 significantly contributes to resistance to P. infestans and regulates the immune responses triggered by the P. infestans PAMP protein INF1. In the future, the identification of novel surface receptors that associate with NbSERK3A and/or NbSERK3B should lead to the identification of new receptors that mediate recognition of oomycete PAMPs, such as INF1.

  5. Avaliação de produtos alternativos para controle da requeima do tomateiro Quantification of the efficacy of alternative products for tomato late blight control

    Directory of Open Access Journals (Sweden)

    Lylian P. Diniz

    2006-04-01

    Full Text Available Em condições de campo, avaliaram-se produtos alternativos no manejo da requeima do tomateiro (Lycopersicon esculentum, causada por Phytophthora infestans, em três experimentos (E. Compararam-se, em E1, extratos de: [pimenta (Capsicum chinense + pimenta-do-reino (Piper nigrum + cravo (Syzygium aromaticum + açafrão-da-índia (Curcuma longa + alho (Allium sativum]; (pimenta-do-reino + cravo + alho; e (cravo + açafrão-da-índia + alho; em E2, óleo de nim (Azadirachta indica (0,5%; leite (20%; e calda bordalesa; e em E3, preparado homeopático obtido de tecido de tomateiro com requeima (dinamização C30; mistura água-etanol; e calda bordalesa. Em E1, os extratos e a testemunha não diferiram quanto à severidade na metade da epidemia (Y50, severidade final (Ymáx, área abaixo da curva de progresso (AACPD e taxa de progresso da doença (r. Em E2, Y50 com óleo de nim (3% e calda bordalesa (1% não diferiram; Ymáx foi maior com óleo de nim (44% que com calda bordalesa (14%; leite não reduziu Ymáx; r e AACPD foram menores com óleo de nim (0,161 e 533, respectivamente que na testemunha (0,211 e 1186, respectivamente e semelhantes àqueles com calda bordalesa (0,156 e 130, respectivamente; r e AACPD foram similares nos tratamentos leite e testemunha. Em E3, Y50, Ymáx, AACPD e r com a mistura água-etanol e preparado homeopático foram similares aos da testemunha. A calda bordalesa foi o tratamento mais eficiente no controle da requeima, e o óleo de nim foi promissor. No manejo da doença em sistemas alternativos de produção, é necessário integrar práticas, para se potencializarem os efeitos individualizados.The efficacy of alternative products to manage tomato (Lycopersicon esculentum late blight, caused by Phytophthora infestans, was evaluated in three field trials (E that compared: E1- [chili pepper (Capsicum chinense + black pepper (Piper nigrum + clove (Syzygium aromaticum + turmeric (Curcuma longa + garlic (Allium sativum

  6. Integrative therapies in cancer: modulating a broad spectrum of targets for cancer management.

    Science.gov (United States)

    Block, Keith I; Block, Penny B; Gyllenhaal, Charlotte

    2015-03-01

    Integrative medicine is an approach to health and healing that "makes use of all appropriate therapeutic approaches, health care professionals, and disciplines to achieve optimal health and healing." A comprehensive integrative medicine intervention for cancer patients typically includes nutritional counseling, biobehavioral strategies, and promotion of physical activity, as well as dietary supplements including herbs, nutraceuticals, and phytochemicals. A broad-spectrum intervention of this type may contribute uniquely to improvement in cancer outcomes through its impact on a wide variety of relevant molecular targets, including effects on multiple cancer hallmarks. Hallmarks that may be particularly affected include genetic instability, tumor-promoting inflammation, deregulated metabolism, and immune system evasion. Because of their susceptibility to manipulation by diet, exercise, and supplementation, these may be characterized as metabolic hallmarks. Research on the use of comprehensive integrative approaches can contribute to the development of systems of multitargeted treatment regimens and would help clarify the combined effect of these approaches on cancer outcomes. PMID:25601968

  7. Multilayer nanoparticle arrays for broad spectrum absorption enhancement in thin film solar cells

    CERN Document Server

    Krishnan, Aravind; Krishna, Siva Rama; Khan, Mohammed Zafar Ali

    2013-01-01

    In this paper, we present a theoretical study on the absorption efficiency enhancement of a thin film amorphous Silicon (a-Si) photovoltaic cell over a broad spectrum of wavelengths using multiple nanoparticle arrays. The light absorption efficiency is enhanced in the lower wavelengths by a nanoparticle array on the surface and in the higher wavelengths by another nanoparticle array embedded in the active region. The efficiency at intermediate wavelengths is enhanced by the constructive interference of plasmon coupled light. We optimize this design by tuning the radius of particles in both arrays, the period of the array and the distance between the two arrays. The optimization results in 61.44% increase in total quantum efficiency for a 500 nm thick a-Si substrate.

  8. Factors influencing success of clinical genome sequencing across a broad spectrum of disorders.

    Science.gov (United States)

    Taylor, Jenny C; Martin, Hilary C; Lise, Stefano; Broxholme, John; Cazier, Jean-Baptiste; Rimmer, Andy; Kanapin, Alexander; Lunter, Gerton; Fiddy, Simon; Allan, Chris; Aricescu, A Radu; Attar, Moustafa; Babbs, Christian; Becq, Jennifer; Beeson, David; Bento, Celeste; Bignell, Patricia; Blair, Edward; Buckle, Veronica J; Bull, Katherine; Cais, Ondrej; Cario, Holger; Chapel, Helen; Copley, Richard R; Cornall, Richard; Craft, Jude; Dahan, Karin; Davenport, Emma E; Dendrou, Calliope; Devuyst, Olivier; Fenwick, Aimée L; Flint, Jonathan; Fugger, Lars; Gilbert, Rodney D; Goriely, Anne; Green, Angie; Greger, Ingo H; Grocock, Russell; Gruszczyk, Anja V; Hastings, Robert; Hatton, Edouard; Higgs, Doug; Hill, Adrian; Holmes, Chris; Howard, Malcolm; Hughes, Linda; Humburg, Peter; Johnson, David; Karpe, Fredrik; Kingsbury, Zoya; Kini, Usha; Knight, Julian C; Krohn, Jonathan; Lamble, Sarah; Langman, Craig; Lonie, Lorne; Luck, Joshua; McCarthy, Davis; McGowan, Simon J; McMullin, Mary Frances; Miller, Kerry A; Murray, Lisa; Németh, Andrea H; Nesbit, M Andrew; Nutt, David; Ormondroyd, Elizabeth; Oturai, Annette Bang; Pagnamenta, Alistair; Patel, Smita Y; Percy, Melanie; Petousi, Nayia; Piazza, Paolo; Piret, Sian E; Polanco-Echeverry, Guadalupe; Popitsch, Niko; Powrie, Fiona; Pugh, Chris; Quek, Lynn; Robbins, Peter A; Robson, Kathryn; Russo, Alexandra; Sahgal, Natasha; van Schouwenburg, Pauline A; Schuh, Anna; Silverman, Earl; Simmons, Alison; Sørensen, Per Soelberg; Sweeney, Elizabeth; Taylor, John; Thakker, Rajesh V; Tomlinson, Ian; Trebes, Amy; Twigg, Stephen R F; Uhlig, Holm H; Vyas, Paresh; Vyse, Tim; Wall, Steven A; Watkins, Hugh; Whyte, Michael P; Witty, Lorna; Wright, Ben; Yau, Chris; Buck, David; Humphray, Sean; Ratcliffe, Peter J; Bell, John I; Wilkie, Andrew O M; Bentley, David; Donnelly, Peter; McVean, Gilean

    2015-07-01

    To assess factors influencing the success of whole-genome sequencing for mainstream clinical diagnosis, we sequenced 217 individuals from 156 independent cases or families across a broad spectrum of disorders in whom previous screening had identified no pathogenic variants. We quantified the number of candidate variants identified using different strategies for variant calling, filtering, annotation and prioritization. We found that jointly calling variants across samples, filtering against both local and external databases, deploying multiple annotation tools and using familial transmission above biological plausibility contributed to accuracy. Overall, we identified disease-causing variants in 21% of cases, with the proportion increasing to 34% (23/68) for mendelian disorders and 57% (8/14) in family trios. We also discovered 32 potentially clinically actionable variants in 18 genes unrelated to the referral disorder, although only 4 were ultimately considered reportable. Our results demonstrate the value of genome sequencing for routine clinical diagnosis but also highlight many outstanding challenges. PMID:25985138

  9. Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

    Science.gov (United States)

    Lise, Stefano; Broxholme, John; Cazier, Jean-Baptiste; Rimmer, Andy; Kanapin, Alexander; Lunter, Gerton; Fiddy, Simon; Allan, Chris; Aricescu, A. Radu; Attar, Moustafa; Babbs, Christian; Becq, Jennifer; Beeson, David; Bento, Celeste; Bignell, Patricia; Blair, Edward; Buckle, Veronica J; Bull, Katherine; Cais, Ondrej; Cario, Holger; Chapel, Helen; Copley, Richard R; Cornall, Richard; Craft, Jude; Dahan, Karin; Davenport, Emma E; Dendrou, Calliope; Devuyst, Olivier; Fenwick, Aimée L; Flint, Jonathan; Fugger, Lars; Gilbert, Rodney D; Goriely, Anne; Green, Angie; Greger, Ingo H.; Grocock, Russell; Gruszczyk, Anja V; Hastings, Robert; Hatton, Edouard; Higgs, Doug; Hill, Adrian; Holmes, Chris; Howard, Malcolm; Hughes, Linda; Humburg, Peter; Johnson, David; Karpe, Fredrik; Kingsbury, Zoya; Kini, Usha; Knight, Julian C; Krohn, Jonathan; Lamble, Sarah; Langman, Craig; Lonie, Lorne; Luck, Joshua; McCarthy, Davis; McGowan, Simon J; McMullin, Mary Frances; Miller, Kerry A; Murray, Lisa; Németh, Andrea H; Nesbit, M Andrew; Nutt, David; Ormondroyd, Elizabeth; Oturai, Annette Bang; Pagnamenta, Alistair; Patel, Smita Y; Percy, Melanie; Petousi, Nayia; Piazza, Paolo; Piret, Sian E; Polanco-Echeverry, Guadalupe; Popitsch, Niko; Powrie, Fiona; Pugh, Chris; Quek, Lynn; Robbins, Peter A; Robson, Kathryn; Russo, Alexandra; Sahgal, Natasha; van Schouwenburg, Pauline A; Schuh, Anna; Silverman, Earl; Simmons, Alison; Sørensen, Per Soelberg; Sweeney, Elizabeth; Taylor, John; Thakker, Rajesh V; Tomlinson, Ian; Trebes, Amy; Twigg, Stephen RF; Uhlig, Holm H; Vyas, Paresh; Vyse, Tim; Wall, Steven A; Watkins, Hugh; Whyte, Michael P; Witty, Lorna; Wright, Ben; Yau, Chris; Buck, David; Humphray, Sean; Ratcliffe, Peter J; Bell, John I; Wilkie, Andrew OM; Bentley, David; Donnelly, Peter; McVean, Gilean

    2015-01-01

    To assess factors influencing the success of whole genome sequencing for mainstream clinical diagnosis, we sequenced 217 individuals from 156 independent cases across a broad spectrum of disorders in whom prior screening had identified no pathogenic variants. We quantified the number of candidate variants identified using different strategies for variant calling, filtering, annotation and prioritisation. We found that jointly calling variants across samples, filtering against both local and external databases, deploying multiple annotation tools and using familial transmission above biological plausibility contributed to accuracy. Overall, we identified disease causing variants in 21% of cases, rising to 34% (23/68) for Mendelian disorders and 57% (8/14) in trios. We also discovered 32 potentially clinically actionable variants in 18 genes unrelated to the referral disorder, though only four were ultimately considered reportable. Our results demonstrate the value of genome sequencing for routine clinical diagnosis, but also highlight many outstanding challenges. PMID:25985138

  10. Synergistic effect of broad-spectrum Sunscreens and antihistamines in the control of idiopathic solar urticaria

    DEFF Research Database (Denmark)

    Faurschou, A.; Wulf, Hans Chr.

    2008-01-01

    Background: It can be difficult to provide patients with idiopathic solar urticaria adequate protection from sunlight. In a nonrandomized controlled trial, we used a standardized phototest procedure to determine the effects of using sunscreen and antihistamine to control idiopathic solar urticaria....... The patients were then treated with a high-protection, broad-spectrum sunscreen and a nonsedative antihistamine alone and in combination and underwent similar phototesting. The use of sunscreen allowed the patients to tolerate much higher doses of UV radiation (32-38 times the MUD on untreated skin......). Antihistamine use did not increase the patients' MUD but did suppress wheal formation and itch, and only immediate erythema sharply located in the irradiated areas occurred. The combination of sunscreen and antihistamine acted synergistically and increased the tolerance to UV radiation markedly (80-267 times...

  11. Emerging broad-spectrum resistance in Pseudomonas aeruginosa and Acinetobacter baumannii: Mechanisms and epidemiology.

    Science.gov (United States)

    Potron, Anaïs; Poirel, Laurent; Nordmann, Patrice

    2015-06-01

    Multidrug resistance is quite common among non-fermenting Gram-negative rods, in particular among clinically relevant species including Pseudomonas aeruginosa and Acinetobacter baumannii. These bacterial species, which are mainly nosocomial pathogens, possess a diversity of resistance mechanisms that may lead to multidrug or even pandrug resistance. Extended-spectrum β-lactamases (ESBLs) conferring resistance to broad-spectrum cephalosporins, carbapenemases conferring resistance to carbapenems, and 16S rRNA methylases conferring resistance to all clinically relevant aminoglycosides are the most important causes of concern. Concomitant resistance to fluoroquinolones, polymyxins (colistin) and tigecycline may lead to pandrug resistance. The most important mechanisms of resistance in P. aeruginosa and A. baumannii and their most recent dissemination worldwide are detailed here. PMID:25857949

  12. Broad spectrum moderators and advanced reflector filters using 208Pb

    DEFF Research Database (Denmark)

    Schönfeldt, Troels; Batkov, K.; Klinkby, Esben Bryndt;

    2015-01-01

    Cold and thermal neutrons used in neutrons scattering experiments are produced in nuclear reactors and spallation sources. The neutrons are cooled to thermal or cold temperatures in thermal and cold moderators, respectively. The present study shows that it is possible to exploit the poor...... thermalizing property of 208Pb to design a broad spectrum moderator, i.e. a moderator which emits thermal and cold neutrons from the same position. Using 208Pb as a reflector filter material is shown to be slightly less efficient than a conventional beryllium reflector filter. However, when surrounding the...... reflector filter by a cold moderator it is possible to regain the neutrons with wavelengths below the Bragg edge, which are suppressed in the beryllium reflector filter. In both the beryllium and lead case surrounding the reflector filter with a cold moderator increases the cold brightness significantly...

  13. Patato late blight R & D program in the Philippines: a country report%菲律宾马铃薯晚疫病的研究和发展计划:国家报告

    Institute of Scientific and Technical Information of China (English)

    ZenaidiaNGanga

    2001-01-01

    The Philippine highlands, particularly the provinces of Benguet and Mt. Provinces are the major producers of potato in the country. Late blight caused by Phytophthora infestans is the major constraint to potato production. Although farmers control late blight by spraying fungicides, the use of resistant varieties in combination with other control measures such as proper cultural management is still the best approach. The disease resistant breeding program started from 1980s. Many of the evaluated germplasms came from the International Potato Center (CIP). The work was conducted with the following objectives: a). Combine late blight resistance with golden nematode (Globodera rostochiensis) resistance, b). Improve the local adaptation of late blight resistant clones and c). Incorporate processing traits into selected late blight resistant varieties. The following summarizes the highlights of the different studies conducted: 1). Four late blight-resistant varieties were selected and officially recommended to farmers, 2). Two of the varieties-Igorota and Solibao have acceptable processing traits and are now commercially planted by the highland farmers, 3). Selected introduced processing varieties with good adaptation and yield are Disco,Columbus, Hermes, Agria, Snowden and Atlantic, 4). Results of the metalaxyl test showed that most of the isolates were metalaxyl resistant or intermediate, 5). Studies on the combination of resistant variety and fungicidal spraying showed that chemical spraying can be reduced as much as 50% using our recommended varieties Igorota and Solibao.%菲律宾马铃薯主要种植在高原Bengue省和Mt省.马铃薯晚疫病是马铃薯生产的主要限制因素.农民采用抗病品种,栽培措施和杀菌剂等综合措施防治晚疫病.从20世纪80年代起,菲律宾从CIP引进许多马铃薯种质资源,与CIP进行合作,开展了杂交育种研究,主要目标是: (a)结合对晚疫病和金线虫(Globodera rostochiensis)的抗性;(b

  14. The Arabidopsis NPR1 gene confers broad-spectrum disease resistance in strawberry.

    Science.gov (United States)

    Silva, Katchen Julliany P; Brunings, Asha; Peres, Natalia A; Mou, Zhonglin; Folta, Kevin M

    2015-08-01

    Although strawberry is an economically important fruit crop worldwide, production of strawberry is limited by its susceptibility to a wide range of pathogens and the lack of major commercial cultivars with high levels of resistance to multiple pathogens. The objective of this study is to ectopically express the Arabidopsis thaliana NPR1 gene (AtNPR1) in the diploid strawberry Fragaria vesca L. and to test transgenic plants for disease resistance. AtNPR1 is a key positive regulator of the long-lasting broad-spectrum resistance known as systemic acquired resistance (SAR) and has been shown to confer resistance to a number of pathogens when overexpressed in Arabidopsis or ectopically expressed in several crop species. We show that ectopic expression of AtNPR1 in strawberry increases resistance to anthracnose, powdery mildew, and angular leaf spot, which are caused by different fungal or bacterial pathogens. The increased resistance is related to the relative expression levels of AtNPR1 in the transgenic plants. In contrast to Arabidopsis plants overexpressing AtNPR1, which grow normally and do not constitutively express defense genes, the strawberry transgenic plants are shorter than non-transformed controls, and most of them fail to produce runners and fruits. Consistently, most of the transgenic lines constitutively express the defense gene FvPR5, suggesting that the SAR activation mechanisms in strawberry and Arabidopsis are different. Nevertheless, our results indicate that overexpression of AtNPR1 holds the potential for generation of broad-spectrum disease resistance in strawberry. PMID:25812515

  15. Surveillance of broad-spectrum antibiotic prescription in Singaporean hospitals: a 5-year longitudinal study.

    Directory of Open Access Journals (Sweden)

    Yi-Xin Liew

    Full Text Available BACKGROUND: Inappropriate prescription of antibiotics may contribute towards higher levels antimicrobial resistance. A key intervention for improving appropriate antibiotic prescription is surveillance of prescription. This paper presents the results of a longitudinal surveillance of broad-spectrum antibiotic prescription in 5 public-sector hospitals in Singapore from 2006 to 2010. METHODOLOGY/PRINCIPAL FINDINGS: Quarterly antibiotic prescription data were obtained and converted to defined daily doses (DDDs per 1,000 inpatient-days. The presence of significant trends in antibiotic prescription over time for both individual and combined hospitals was tested by regression analysis and corrected for autocorrelation between time-points. Excluding fluoroquinolones, there was a significant increase in prescription of all monitored antibiotics from an average of 233.12 defined daily doses (DDD/1,000 inpatient-days in 2006 to 254.38 DDD/1,000 inpatient-days in 2010 (Coefficient = 1.13, 95%CI: 0.16-2.09, p = 0.025. Increasing utilization of carbapenems, piperacillin/tazobactam, and Gram-positive agents were seen in the majority of the hospitals, while cephalosporins were less prescribed over time. The combined expenditure for 5 hospitals increased from USD9.9 million in 2006 to USD16.7 million in 2010. CONCLUSIONS/SIGNIFICANCE: The rate of prescription of broad-spectrum antibiotics in Singaporean hospitals is much higher compared to those of European hospitals. This may be due to high rates of antimicrobial resistance. The increase in expenditure on monitored antibiotics over the past 5 years outstripped the actual increase in DDD/1,000 inpatient-days of antibiotics prescribed. Longitudinal surveillance of antibiotic prescription on a hospital and countrywide level is important for detecting trends for formulating interventions or policies. Further research is needed to understand the causes for the various prescription trends and to act on these where

  16. Survey of pharmacists and physicians on drug interactions between combined oral contraceptives and broad-spectrum antibiotics

    Directory of Open Access Journals (Sweden)

    Masters KP

    2009-09-01

    Full Text Available Objective: To evaluate physician and pharmacist knowledge on potential drug interactions between combined oral contraceptives (COC and broad-spectrum antibiotics and determine if any difference exists between responses.Methods: Two hundred licensed retail pharmacists and 200 licensed family practice physicians in the states of Virginia, West Virginia, and Maryland were mailed an anonymous survey between August 2007 and November 2007. The survey consisted of 3 short questions asking practitioners about their current opinion on drug interactions with COCs and whether an alternative form of contraception is needed for patients taking COC and concomitant broad-spectrum antibiotics. The main outcome measure of the survey included: identifying how physicians and pharmacists handle prescribing or dispensing COCs along with broad-spectrum antibiotics. Gender, educational degree, and years in practice were also collected. Results: A total of 182 participants returned the surveys (57% were physicians and 43% were pharmacists. When asked if broad-spectrum antibiotics have a clinically significant interaction with COCs, 82.7% of physicians and 88.5% of pharmacists answered, “yes”. Of the respondents, 84.6% stated that the drug interaction warrants the patient to be advised to use back-up contraception. A total of 90.1% stated that they currently instruct patients to use back-up contraception when prescribing or dispensing antibiotics to a patient who is on COC, with no statistically significant difference existing between the responses of the pharmacists and the physicians.Conclusion: Physicians and pharmacists believe that broad-spectrum antibiotics decrease the effectiveness of COCs. These practitioners warn their patients of this interaction and advise the use of back-up contraception. More education should be provided to practitioners regarding the data concerning COCs and broad spectrum antibiotics and lack of a proven interaction.

  17. Chemical and Cultural Approaches to Enhance Host Resistance to Fire Blight: Growth Regulators

    Science.gov (United States)

    Fire blight caused by the bacterium Erwinia amylovora [(Burrill) Winslow et al.] is one of the most destructive diseases in apple. Infection is initiated in the spring on flowers and with a second stage in late spring and summer termed shoot blight. Vigorous succulent growth favors fire blight inf...

  18. Analysis of mobile health applications for a broad spectrum of consumers: a user experience approach.

    Science.gov (United States)

    García-Gómez, Juan M; de la Torre-Díez, Isabel; Vicente, Javier; Robles, Montserrat; López-Coronado, Miguel; Rodrigues, Joel J

    2014-03-01

    Mobile health (m-health) apps can bring health prevention and promotion to the general population. The main purpose of this article is to analyze different m-health apps for a broad spectrum of consumers by means of three different experiences. This goal was defined following the strategic documents generated by the main prospective observatories of Information and Communications Technology for health. After a general exploration of the app markets, we analyze the entries of three specific themes focused in this article: type 2 diabetes, obesity, and breast-feeding. The user experiences reported in this study mostly cover the segments of (1) chronically monitored consumers through a Web mobile app for predicting type 2 diabetes (Diab_Alert app), (2) information seekers through a mobile app for maternity (Lactation app) and partially (3) the motivated healthy consumers through a mobile app for a dietetic monitoring and assessment (SapoFit app). These apps were developed by the authors of this work. PMID:24550566

  19. Steps toward broad-spectrum therapeutics: discovering virulence-associated genes present in diverse human pathogens

    Directory of Open Access Journals (Sweden)

    de Rochefort Anna

    2009-10-01

    Full Text Available Abstract Background New and improved antimicrobial countermeasures are urgently needed to counteract increased resistance to existing antimicrobial treatments and to combat currently untreatable or new emerging infectious diseases. We demonstrate that computational comparative genomics, together with experimental screening, can identify potential generic (i.e., conserved across multiple pathogen species and novel virulence-associated genes that may serve as targets for broad-spectrum countermeasures. Results Using phylogenetic profiles of protein clusters from completed microbial genome sequences, we identified seventeen protein candidates that are common to diverse human pathogens and absent or uncommon in non-pathogens. Mutants of 13 of these candidates were successfully generated in Yersinia pseudotuberculosis and the potential role of the proteins in virulence was assayed in an animal model. Six candidate proteins are suggested to be involved in the virulence of Y. pseudotuberculosis, none of which have previously been implicated in the virulence of Y. pseudotuberculosis and three have no record of involvement in the virulence of any bacteria. Conclusion This work demonstrates a strategy for the identification of potential virulence factors that are conserved across a number of human pathogenic bacterial species, confirming the usefulness of this tool.

  20. Inheritance of er1-Based Broad-Spectrum Powdery Mildew Resistance in Pea (Pisum sativum L.

    Directory of Open Access Journals (Sweden)

    Muhammad Abubakkar AZMAT

    2013-12-01

    Full Text Available The knowledge about the nature and number of gene(s controlling resistance is the pre-requisite for the success of powdery mildew resistance breeding program in pea. Seven biparental cross combinations involving three highly resistant (It-96, No. 267 and JI 2302 and two highly susceptible (Climax and PF-400 pea genotypes were evaluated for their response to powdery mildew disease. The quantitative microscopic scale of disease assessment coupled with detached leaf assay was employed for the evaluation of disease response of the crosses and their generations (F1, F2, BCs, and BCr against two highly virulent conidial isolates of Erysiphe pisi. The disease response of 677 F2 plants has revealed a typical monohybrid Mendelian 3 (susceptible: 1 (resistant segregation, moreover, the evaluation of 254 BCr plants gave a perfect 1 (susceptible: 1(resistant segregation. No complementation was observed among all the F1 plants of three complementation crosses, suggesting that the same allele (er-1 conditions complete and broad-spectrum resistance in all the powdery mildew resistant pea genotypes in homozygous recessive form.

  1. Broad-spectrum identification and discrimination between biothreat agents and near-neighbor species

    Science.gov (United States)

    Malanoski, Anthony P.; Leski, Tomasz A.; Cheng, Luke; Wang, Zheng; Stenger, David A.; Lin, Baochuan

    2009-05-01

    A comprehensive resequencing microarray "Tropical and Emerging Infections (TessArray RPM-TEI 1.0 array)" has been developed to identify and distinguish between biothreat organisms of interest and genetically close related species. This array has undergone validation using an innovative approach where synthetic DNA fragments are used for organisms that it is not safe to work with outside a biosafety 3 facilities. The approach was confirmed from testing a subset of target organisms, such as Ebola viruses and Lassa viruses, at USAMRIID. Most potential biothreat organisms are actually endemic in some part of the world. Proper surveillance of biothreat agents will require some form of monitoring the evolution of the indigenous organisms under their natural environment, so when changes in the organisms occur, the diagnostic assays for these organisms can be reviewed to assure they still provide detection. Using the resequencing microarray (RPM) for detection in locations such as the Africa can support indigenous monitoring as it provides sequence information. An ongoing collaboration with Njala University aims to establish a broad-spectrum pathogen surveillance capability in the Republic of Sierra Leone, West Africa using RPM technology combined with a Geographic Information System. This has the potential to improve the public health efforts in an infected area as well as provide monitoring of the changes occurring to a biothreat organism, i.e. Lassa viruses, in its natural location.

  2. Human DDX3 protein is a valuable target to develop broad spectrum antiviral agents.

    Science.gov (United States)

    Brai, Annalaura; Fazi, Roberta; Tintori, Cristina; Zamperini, Claudio; Bugli, Francesca; Sanguinetti, Maurizio; Stigliano, Egidio; Esté, José; Badia, Roger; Franco, Sandra; Martinez, Miguel A; Martinez, Javier P; Meyerhans, Andreas; Saladini, Francesco; Zazzi, Maurizio; Garbelli, Anna; Maga, Giovanni; Botta, Maurizio

    2016-05-10

    Targeting a host factor essential for the replication of different viruses but not for the cells offers a higher genetic barrier to the development of resistance, may simplify therapy regimens for coinfections, and facilitates management of emerging viral diseases. DEAD-box polypeptide 3 (DDX3) is a human host factor required for the replication of several DNA and RNA viruses, including some of the most challenging human pathogens currently circulating, such as HIV-1, Hepatitis C virus, Dengue virus, and West Nile virus. Herein, we showed for the first time, to our knowledge, that the inhibition of DDX3 by a small molecule could be successfully exploited for the development of a broad spectrum antiviral agent. In addition to the multiple antiviral activities, hit compound 16d retained full activity against drug-resistant HIV-1 strains in the absence of cellular toxicity. Pharmacokinetics and toxicity studies in rats confirmed a good safety profile and bioavailability of 16d. Thus, DDX3 is here validated as a valuable therapeutic target. PMID:27118832

  3. Broad-spectrum sun-protective action of Porphyra-334 derived from Porphyra vietnamensis

    Directory of Open Access Journals (Sweden)

    Saurabh Bhatia

    2010-01-01

    Full Text Available There are enormous UV-protective compounds present in the current world market, out of which 98% give protection against UV-B range and the remaining 2% are potent against far UV-A range only. Furthermore, these synthetic compounds have various problems related to photo-stability and cross-stability. There is a vital need of sunscreen agents that will remain stable for prolonged periods and provide broad-spectrum protection against harmful UV range. The Indian Ocean contains large amounts of macro-algae which synthesize varied amount of mycosporine amino acids, "sun-protective compounds" by shikmic acid pathway. In the present study, we have evaluated the sunscreen protection provided by Porphyra-334, a mycosporine amino acid isolated from Indian sp. of Porphyra. Furthermore, the isolated compound was detected by high performance thin layer chromatography (HPTLC fingerprinting, high performance liquid chromatography (HPLC and ultraviolet (UV, whereas nuclear magnetic resonance (NMR spectroscopy and infrared spectrometry were used for its structural characterization. Stability studies were performed under different storage and pH conditions. Ultimately a sunscreen formulation was developed and its potential against marketed Aloe vera gel was evaluated by in vitro sunscreen protection method. It was observed that sunscreen potential of Porphyra-334 was 5.11-fold greater than that of the marketed Aloe vera gel preparation.

  4. Broad spectrum pro-quorum-sensing molecules as inhibitors of virulence in vibrios.

    Science.gov (United States)

    Ng, Wai-Leung; Perez, Lark; Cong, Jianping; Semmelhack, Martin F; Bassler, Bonnie L

    2012-01-01

    Quorum sensing (QS) is a bacterial cell-cell communication process that relies on the production and detection of extracellular signal molecules called autoinducers. QS allows bacteria to perform collective activities. Vibrio cholerae, a pathogen that causes an acute disease, uses QS to repress virulence factor production and biofilm formation. Thus, molecules that activate QS in V. cholerae have the potential to control pathogenicity in this globally important bacterium. Using a whole-cell high-throughput screen, we identified eleven molecules that activate V. cholerae QS: eight molecules are receptor agonists and three molecules are antagonists of LuxO, the central NtrC-type response regulator that controls the global V. cholerae QS cascade. The LuxO inhibitors act by an uncompetitive mechanism by binding to the pre-formed LuxO-ATP complex to inhibit ATP hydrolysis. Genetic analyses suggest that the inhibitors bind in close proximity to the Walker B motif. The inhibitors display broad-spectrum capability in activation of QS in Vibrio species that employ LuxO. To the best of our knowledge, these are the first molecules identified that inhibit the ATPase activity of a NtrC-type response regulator. Our discovery supports the idea that exploiting pro-QS molecules is a promising strategy for the development of novel anti-infectives. PMID:22761573

  5. Broad spectrum pro-quorum-sensing molecules as inhibitors of virulence in vibrios.

    Directory of Open Access Journals (Sweden)

    Wai-Leung Ng

    Full Text Available Quorum sensing (QS is a bacterial cell-cell communication process that relies on the production and detection of extracellular signal molecules called autoinducers. QS allows bacteria to perform collective activities. Vibrio cholerae, a pathogen that causes an acute disease, uses QS to repress virulence factor production and biofilm formation. Thus, molecules that activate QS in V. cholerae have the potential to control pathogenicity in this globally important bacterium. Using a whole-cell high-throughput screen, we identified eleven molecules that activate V. cholerae QS: eight molecules are receptor agonists and three molecules are antagonists of LuxO, the central NtrC-type response regulator that controls the global V. cholerae QS cascade. The LuxO inhibitors act by an uncompetitive mechanism by binding to the pre-formed LuxO-ATP complex to inhibit ATP hydrolysis. Genetic analyses suggest that the inhibitors bind in close proximity to the Walker B motif. The inhibitors display broad-spectrum capability in activation of QS in Vibrio species that employ LuxO. To the best of our knowledge, these are the first molecules identified that inhibit the ATPase activity of a NtrC-type response regulator. Our discovery supports the idea that exploiting pro-QS molecules is a promising strategy for the development of novel anti-infectives.

  6. Development of Broad-Spectrum Halomethyl Ketone Inhibitors Against Coronavirus Main Protease 3CL(pro)

    Energy Technology Data Exchange (ETDEWEB)

    Bacha,U.; Barilla, J.; Gabelli, S.; Kiso, Y.; Amzel, L.; Freire, E.

    2008-01-01

    Coronaviruses comprise a large group of RNA viruses with diverse host specificity. The emergence of highly pathogenic strains like the SARS coronavirus (SARS-CoV), and the discovery of two new coronaviruses, NL-63 and HKU1, corroborates the high rate of mutation and recombination that have enabled them to cross species barriers and infect novel hosts. For that reason, the development of broad-spectrum antivirals that are effective against several members of this family is highly desirable. This goal can be accomplished by designing inhibitors against a target, such as the main protease 3CLpro (Mpro), which is highly conserved among all coronaviruses. Here 3CLpro derived from the SARS-CoV was used as the primary target to identify a new class of inhibitors containing a halomethyl ketone warhead. The compounds are highly potent against SARS 3CLpro with Ki's as low as 300 nm. The crystal structure of the complex of one of the compounds with 3CLpro indicates that this inhibitor forms a thioether linkage between the halomethyl carbon of the warhead and the catalytic Cys 145. Furthermore, Structure Activity Relationship (SAR) studies of these compounds have led to the identification of a pharmacophore that accurately defines the essential molecular features required for the high affinity.

  7. Broad-spectrum β-lactamases among Enterobacteriaceae of animal origin: molecular aspects, mobility and impact on public health

    OpenAIRE

    Smet, Annemieke; Martel, An; Persoons, Davy; Dewulf, Jeroen; Heyndrickx, Marc; Herman, Lieve; Haesebrouck, Freddy; Butaye, Patrick

    2010-01-01

    Broad-spectrum β-lactamase genes (coding for extended-spectrum β-lactamases (ESBLs) and AmpC β-lactamases) have been frequently demonstrated in the microbiota of food-producing animals. This may pose a human health hazard since these genes may be present in zoonotic bacteria, which would cause a direct problem. They can also be present in commensals, which may act as a reservoir of resistance genes for pathogens causing disease both in humans and animals. Broad-spectrum β-lactamase genes ...

  8. Changes in Cell Viability of Wounded Fibroblasts following Laser Irradiation in Broad-Spectrum or Infrared Light

    OpenAIRE

    Hawkins, Denise; Abrahamse, Heidi

    2007-01-01

    Objective. This study aimed to establish if broad-spectrum or infrared (IR) light in combination with laser therapy can assist phototherapy to improve the cell function of wounded cells. Background. The effect of laser light may be partly or completely reduced by broad-spectrum light. Methods. Wounded human skin fibroblasts were irradiated with 5 J/cm2 using a helium-neon laser, a diode laser, or an Nd:YAG laser in the dark, in the light, or in IR. Changes in cell viability were evaluated by ...

  9. Sistemas de previsão de requeima em cultivos de batata em Santa Maria, RS Forecast systems of late blight in potato crops in Santa Maria, Rio Grande do Sul State, Brazil

    Directory of Open Access Journals (Sweden)

    Leosane Cristina Bosco

    2010-01-01

    Full Text Available Os sistemas de previsão constituem alternativa para o controle eficiente da requeima em batata e consequente redução da quantidade de fungicidas utilizados, dos custos de produção e da poluição ambiental. O objetivo deste trabalho foi avaliar os sistemas de previsão de ocorrência de requeima, Blitecast e Prophy, em cultivos de primavera e outono de batata, cultivar Macaca, suscetível a requeima, na região produtora de Santa Maria (RS. Os experimentos foram desenvolvidos na primavera de 2006 e outono de 2007 com a cultivar Macaca. Os dados meteorológicos foram coletados no centro da área experimental com uma estação automática e com psicrômetros instalados em diferentes níveis. Os tratamentos foram arranjados no delineamento inteiramente casualizado, com quatro repetições, sendo diferenciados por meio dos valores de severidade acumulados, calculados pelos sistemas de previsão Blitecast e Prophy. Os valores de severidade acumulados foram utilizados como indicadores do momento de aplicação de fungicida para o controle da requeima. Verificou-se que a utilização do sistema de previsão de requeima Prophy, com acúmulo de 15, 20 ou 25 valores de severidade e do sistema Blitecast com 24 valores de severidade acumulados, para o genótipo de batata suscetível, Macaca, permite reduzir o número de aplicações de fungicidas sem afetar significativamente a produtividade de tubérculos comerciais.The forecast systems are an alternative to the efficient control of late blight potatoes and consequent reduction in the amount of fungicide and thereby reduce production costs and environmental pollution. The objective of this study was to evaluate forecast systems, Blitecast and Prophy, for late blight occurrence in Macaca potato cultivar in Santa Maria, Rio Grande do Sul State, Brazil. The experiments were carried out during Spring 2006 and Autumn 2007 with the Macaca cultivar characterized as susceptible to late blight. Meteorological

  10. Broad-spectrum resistance to Bacillus thuringiensis toxins by western corn rootworm (Diabrotica virgifera virgifera)

    Science.gov (United States)

    Jakka, Siva R. K.; Shrestha, Ram B.; Gassmann, Aaron J.

    2016-01-01

    The evolution of resistance and cross-resistance threaten the sustainability of genetically engineered crops that produce insecticidal toxins derived from the bacterium Bacillus thuringiensis (Bt). Western corn rootworm, Diabrotica virgifera virgifera LeConte, is a serious pest of maize and has been managed with Bt maize since 2003. We conducted laboratory bioassays with maize hybrids producing Bt toxins Cry3Bb1, mCry3A, eCry3.1Ab, and Cry34/35Ab1, which represent all commercialized Bt toxins for management of western corn rootworm. We tested populations from fields where severe injury to Cry3Bb1 maize was observed, and populations that had never been exposed to Bt maize. Consistent with past studies, bioassays indicated that field populations were resistant to Cry3Bb1 maize and mCry3A maize, and that cross-resistance was present between these two types of Bt maize. Additionally, bioassays revealed resistance to eCry3.1Ab maize and cross-resistance among Cry3Bb1, mCry3A and eCry3.1Ab. However, no resistance or cross-resistance was detected for Cry34/35Ab1 maize. This broad-spectrum resistance illustrates the potential for insect pests to develop resistance rapidly to multiple Bt toxins when structural similarities are present among toxins, and raises concerns about the long-term durability of Bt crops for management of some insect pests. PMID:27297953

  11. Depletion of Cultivatable Gut Microbiota by Broad-Spectrum Antibiotic Pretreatment Worsens Outcome After Murine Stroke

    Science.gov (United States)

    Winek, Katarzyna; Engel, Odilo; Koduah, Priscilla; Heimesaat, Markus M.; Fischer, André; Bereswill, Stefan; Dames, Claudia; Kershaw, Olivia; Gruber, Achim D.; Curato, Caterina; Oyama, Naoki; Meisel, Christian; Meisel, Andreas

    2016-01-01

    Background and Purpose— Antibiotics disturbing microbiota are often used in treatment of poststroke infections. A bidirectional brain–gut microbiota axis was recently suggested as a modulator of nervous system diseases. We hypothesized that gut microbiota may be an important player in the course of stroke. Methods— We investigated the outcome of focal cerebral ischemia in C57BL/6J mice after an 8-week decontamination with quintuple broad-spectrum antibiotic cocktail. These microbiota-depleted animals were subjected to 60 minutes middle cerebral artery occlusion or sham operation. Infarct volume was measured using magnetic resonance imaging, and mice were monitored clinically throughout the whole experiment. At the end point, tissues were preserved for further analysis, comprising histology and immunologic investigations using flow cytometry. Results— We found significantly decreased survival in the middle cerebral artery occlusion microbiota-depleted mice when the antibiotic cocktail was stopped 3 days before surgery (compared with middle cerebral artery occlusion specific pathogen-free and sham-operated microbiota-depleted mice). Moreover, all microbiota-depleted animals in which antibiotic treatment was terminated developed severe acute colitis. This phenotype was rescued by continuous antibiotic treatment or colonization with specific pathogen-free microbiota before surgery. Further, infarct volumes on day one did not differ between any of the experimental groups. Conclusions— Conventional microbiota ensures intestinal protection in the mouse model of experimental stroke and prevents development of acute and severe colitis in microbiota-depleted mice not given antibiotic protection after cerebral ischemia. Our experiments raise the clinically important question as to whether microbial colonization or specific microbiota are crucial for stroke outcome. PMID:27056982

  12. Manganese Oxide Nanoarchitectures as Broad-Spectrum Sorbents for Toxic Gases.

    Science.gov (United States)

    Long, Jeffrey W; Wallace, Jean M; Peterson, Gregory W; Huynh, Kim

    2016-01-20

    We demonstrate that sol-gel-derived manganese oxide (MnOx) nanoarchitectures exhibit broad-spectrum filtration activity for three chemically diverse toxic gases: NH3, SO2, and H2S. Manganese oxides are synthesized via the reaction of NaMnO4 and fumaric acid to form monolithic gels of disordered, mixed-valent Na-MnOx; incorporated Na(+) is readily exchanged for H(+) by subsequent acid rinsing to form a more crystalline H-MnOx phase. For both Na-MnOx and H-MnOx forms, controlled pore-fluid removal yields either densified, yet still mesoporous, xerogels or low-density aerogels (prepared by drying from supercritical CO2). The performance of these MnOx nanoarchitectures as filtration media is assessed using dynamic-challenge microbreakthrough protocols. We observe technologically relevant sorption capacities under both dry conditions and wet (80% relative humidity) for each of the three toxic industrial chemicals investigated. The Na-MnOx xerogels and aerogels provide optimal performance with the aerogel exhibiting maximum sorption capacities of 39, 200, and 680 mg g(-1) for NH3, SO2, and H2S, respectively. Postbreakthrough characterization using X-ray photoelectron spectroscopy (XPS) and diffuse-reflectance infrared Fourier transform spectroscopy (DRIFTS) confirms that NH3 is captured and partially protonated within the MnOx structure, while SO2 undergoes oxidation by the redox-active oxide to form adsorbed sulfate at the MnOx surface. Hydrogen sulfide is also oxidized to form a combination of sulfate and sulfur/polysulfide products, concomitant with a decrease in the average Mn oxidation state from 3.43 to 2.94 and generation of a MnOOH phase. PMID:26741498

  13. Extensive sequence variation in rice blast resistance gene Pi54 makes it broad spectrum in nature

    Directory of Open Access Journals (Sweden)

    Shallu eThakur

    2015-05-01

    Full Text Available Rice blast resistant gene, Pi54 cloned from rice line, Tetep, is effective against diverse isolates of Magnaporthe oryzae. In this study, we prospected the allelic variants of the dominant blast resistance gene from a set of 92 rice lines to determine the nucleotide diversity, pattern of its molecular evolution, phylogenetic relationships and evolutionary dynamics, and to develop allele specific markers. High quality sequences were generated for homologs of Pi54 gene. Using comparative sequence analysis, InDels of variable sizes in all the alleles were observed. Profiling of the selected sites of SNP (Single Nucleotide Polymorphism and amino acids (N sites ≥ 10 exhibited constant frequency distribution of mutational and substitutional sites between the resistance and susceptible rice lines, respectively. A total of 50 new haplotypes based on the nucleotide polymorphism was also identified. A unique haplotype (H_3 was found to be linked to all the resistant alleles isolated from indica rice lines. Unique leucine zipper and tyrosine sulfation sites were identified in the predicted Pi54 proteins. Selection signals were observed in entire coding sequence of resistance alleles, as compared to LRR domains for susceptible alleles. This is a maiden report of extensive variability of Pi54 alleles in different landraces and cultivated varieties, possibly, attributing broad-spectrum resistance to Magnaporthe oryzae. The sequence variation in two consensus region: 163 bp and 144 bp were used for the development of allele specific DNA markers. Validated markers can be used for the selection and identification of better allele(s and their introgression in commercial rice cultivars employing marker assisted selection.

  14. Systems analysis of a RIG-I agonist inducing broad spectrum inhibition of virus infectivity.

    Directory of Open Access Journals (Sweden)

    Marie-Line Goulet

    Full Text Available The RIG-I like receptor pathway is stimulated during RNA virus infection by interaction between cytosolic RIG-I and viral RNA structures that contain short hairpin dsRNA and 5' triphosphate (5'ppp terminal structure. In the present study, an RNA agonist of RIG-I was synthesized in vitro and shown to stimulate RIG-I-dependent antiviral responses at concentrations in the picomolar range. In human lung epithelial A549 cells, 5'pppRNA specifically stimulated multiple parameters of the innate antiviral response, including IRF3, IRF7 and STAT1 activation, and induction of inflammatory and interferon stimulated genes - hallmarks of a fully functional antiviral response. Evaluation of the magnitude and duration of gene expression by transcriptional profiling identified a robust, sustained and diversified antiviral and inflammatory response characterized by enhanced pathogen recognition and interferon (IFN signaling. Bioinformatics analysis further identified a transcriptional signature uniquely induced by 5'pppRNA, and not by IFNα-2b, that included a constellation of IRF7 and NF-kB target genes capable of mobilizing multiple arms of the innate and adaptive immune response. Treatment of primary PBMCs or lung epithelial A549 cells with 5'pppRNA provided significant protection against a spectrum of RNA and DNA viruses. In C57Bl/6 mice, intravenous administration of 5'pppRNA protected animals from a lethal challenge with H1N1 Influenza, reduced virus titers in mouse lungs and protected animals from virus-induced pneumonia. Strikingly, the RIG-I-specific transcriptional response afforded partial protection from influenza challenge, even in the absence of type I interferon signaling. This systems approach provides transcriptional, biochemical, and in vivo analysis of the antiviral efficacy of 5'pppRNA and highlights the therapeutic potential associated with the use of RIG-I agonists as broad spectrum antiviral agents.

  15. Nitazoxanide: a first-in-class broad-spectrum antiviral agent.

    Science.gov (United States)

    Rossignol, Jean-François

    2014-10-01

    Originally developed and commercialized as an antiprotozoal agent, nitazoxanide was later identified as a first-in-class broad-spectrum antiviral drug and has been repurposed for the treatment of influenza. A Phase 2b/3 clinical trial recently published in The Lancet Infectious Diseases found that oral administration of nitazoxanide 600mg twice daily for five days reduced the duration of clinical symptoms and reduced viral shedding compared to placebo in persons with laboratory-confirmed influenza. The same study also suggested a potential benefit for subjects with influenza-like illness who did not have influenza or other documented respiratory viral infection. From a chemical perspective, nitazoxanide is the scaffold for a new class of drugs called thiazolides. These small-molecule drugs target host-regulated processes involved in viral replication. Nitazoxanide is orally bioavailable and safe with extensive post-marketing experience involving more than 75 million adults and children. A new dosage formulation of nitazoxanide is presently undergoing global Phase 3 clinical development for the treatment of influenza. Nitazoxanide inhibits a broad range of influenza A and B viruses including influenza A(pH1N1) and the avian A(H7N9) as well as viruses that are resistant to neuraminidase inhibitors. It is synergistic with neuraminidase inhibitors, and combination therapy with oseltamivir is being studied in humans as part of ongoing Phase 3 clinical development. Nitazoxanide also inhibits the replication of a broad range of other RNA and DNA viruses including respiratory syncytial virus, parainfluenza, coronavirus, rotavirus, norovirus, hepatitis B, hepatitis C, dengue, yellow fever, Japanese encephalitis virus and human immunodeficiency virus in cell culture assays. Clinical trials have indicated a potential role for thiazolides in treating rotavirus and norovirus gastroenteritis and chronic hepatitis B and chronic hepatitis C. Ongoing and future clinical development

  16. Broad-spectrum resistance to Bacillus thuringiensis toxins by western corn rootworm (Diabrotica virgifera virgifera).

    Science.gov (United States)

    Jakka, Siva R K; Shrestha, Ram B; Gassmann, Aaron J

    2016-01-01

    The evolution of resistance and cross-resistance threaten the sustainability of genetically engineered crops that produce insecticidal toxins derived from the bacterium Bacillus thuringiensis (Bt). Western corn rootworm, Diabrotica virgifera virgifera LeConte, is a serious pest of maize and has been managed with Bt maize since 2003. We conducted laboratory bioassays with maize hybrids producing Bt toxins Cry3Bb1, mCry3A, eCry3.1Ab, and Cry34/35Ab1, which represent all commercialized Bt toxins for management of western corn rootworm. We tested populations from fields where severe injury to Cry3Bb1 maize was observed, and populations that had never been exposed to Bt maize. Consistent with past studies, bioassays indicated that field populations were resistant to Cry3Bb1 maize and mCry3A maize, and that cross-resistance was present between these two types of Bt maize. Additionally, bioassays revealed resistance to eCry3.1Ab maize and cross-resistance among Cry3Bb1, mCry3A and eCry3.1Ab. However, no resistance or cross-resistance was detected for Cry34/35Ab1 maize. This broad-spectrum resistance illustrates the potential for insect pests to develop resistance rapidly to multiple Bt toxins when structural similarities are present among toxins, and raises concerns about the long-term durability of Bt crops for management of some insect pests. PMID:27297953

  17. Successful five-item triage for the broad spectrum of mental disorders in pregnancy - A validation study

    NARCIS (Netherlands)

    C. Quispel (Chantal); T.A.J. Schneider (Tom); W.J.G. Hoogendijk (Witte); G.J. Bonsel (Gouke); M.P. Lambregtse-van den Berg (Mijke)

    2015-01-01

    textabstractBackground: Mental disorders are prevalent during pregnancy, affecting 10% of women worldwide. To improve triage of a broad spectrum of mental disorders, we investigated the decision impact validity of: 1) a short set of currently used psychiatric triage items, 2) this set with the inclu

  18. Wild Coastline Birds as Reservoirs of Broad-Spectrum-β-Lactamase-Producing Enterobacteriaceae in Miami Beach, Florida

    OpenAIRE

    Poirel, L.; Potron, A.; de la Cuesta, C.; Cleary, T.; Nordmann, P; Munoz-Price, L. S.

    2012-01-01

    A high rate of broad-spectrum-β-lactamase-producing Escherichia coli isolates was identified from seagull and pelican feces collected in the Miami Beach, Florida, area. The most commonly identified resistance determinants were CMY-2 and CTX-M-15. Those wild birds might be therefore considered vehicles for wide dissemination of multidrug-resistant Enterobacteriaceae in the United States.

  19. The broad-spectrum cation channel blocker pinokalant (LOE 908 MS) reduces brain infarct volume in rats

    DEFF Research Database (Denmark)

    Christensen, Thomas; Wienrich, Marion; Ensinger, Helmut A;

    2005-01-01

    Activation of cation channels conducting Ca2+, Na+ and K+ is involved in the pathogenesis of infarction in experimental focal cerebral ischaemia. Pinokalant (LOE 908 MS) is a novel broad-spectrum inhibitor of several subtypes of such channels and has previously been shown to improve the metabolic...

  20. 土层置换对马铃薯叶片酶活性及晚疫病的影响%Effects of Soil Replacement of Potato Leaf Enzyme Activity and Late Blight Disease Index

    Institute of Scientific and Technical Information of China (English)

    张丁; 苍真名; 白雪静; 王秋菊; 刘峰; 高中超; 焦峰; 翟瑞常

    2015-01-01

    The analysis of the effects of soil displacement and soil sterilization measures on enzyme activity in leaves of potato, and provide the technical support of sciencefor the elimination of potato continuous cropping obstacle was reaseached. The results showed that soil replacement or soil sterilization treatment increased the activity of protective enzyme in potato leaves (superoxide dismutase, peroxidase and catalase), and reduced the activity of cellulase and protease, which improved the resistance of potato to late blight. Soil replacement and soil sterilization treatment eliminates the potato late blight caused by continuous cropping obstacles incidence,and Phasphate 15% and the replacement of soil (T2) and Application of soil fungicide antiseptic spirit and no replacement of soil (H) treatment in eliminating due to continuous cropping potato late blightbest effect. But the soil through?soil replacement and add organic fertilizer after treatment (T3 treatment), the disease index of potato late blight of potato during the growing period of the whole inner were significantly higher than the other four treatments,and the replacement of soil (T1),T2 and H treatment was 17.5%,47.1%,60.8% and 66.6% higher than the CK in 77 days respectively,which showed that the use of organic manure was not conducive to the reduction of potato late blight in soil after replacement.%研究了土层置换及土壤灭菌措施对马铃薯叶片酶活性的影响. 结果表明,土层置换或土壤灭菌处理提高了马铃薯叶片中保护酶(超氧化物歧化酶、过氧化物酶和过氧化氢酶)的活性,降低了叶片中纤维素酶和蛋白酶的活性,提高了马铃薯对晚疫病的抵抗能力. 土层置换和土壤灭菌处理可以消除马铃薯由于连作障碍而产生的晚疫病的发病率,其中增施磷肥15%且置换土壤(T2)与施杀菌灵且不置换土壤(H)处理在消除马铃薯由于连作而产生的晚疫病方面效果最佳. 而土壤经过土壤

  1. 宁夏马铃薯晚疫病保护剂和治疗剂田间药效研究%Study on the Efficacy of Protective and Therapeutic Agents to Control Potato Late Blight in Ningxia

    Institute of Scientific and Technical Information of China (English)

    刘浩; 张珺; 谢成君; 张宗山; 沈瑞清

    2012-01-01

    The effects of different protective and therapeutic agents to control potato late blight were compared by applying them to the center disease plant in the field. The results showed that among the protective agents, 53.8% cupric hydroxide WDG was the best; among therapeutic agents, 58% Ridomil Gold WP was the best.%在田间中心病株出现马铃薯晚疫病症状后,施用保护剂和治疗剂,对比3种保护剂和15种治疗剂防治马铃薯晚疫病的效果.结果表明,保护剂中53.8%氢氧化铜水分散粒剂防治效果最好,治疗剂中58%金雷多米尔可湿性粉剂的防治效果最好.

  2. Ascochyta Blight of Chickpea

    OpenAIRE

    Kahraman, Ali; Ozkan, Zuhal

    2016-01-01

    Ascochyta blight (Ascochyta rabiei) which is also called as anthracnose is the most important yield increasing fungal disease in chickpea production over the world and usually depends on winter rains. Symptoms of disease usually appear around flowering and podding time as patches of blighted plants in the field. Typical circular spots appear on leaves and pods, elongated lesions on stem, and deep cankerous lesions on seeds. Present research was made to an evaluation of ascochyta blight, main ...

  3. Prevalence and Mechanisms of Broad-Spectrum β-Lactam Resistance in Enterobacteriaceae: a Children's Hospital Experience

    OpenAIRE

    Qin, Xuan; Zerr, Danielle M; Weissman, Scott J.; Englund, Janet A.; Denno, Donna M.; Klein, Eileen J.; Tarr, Phillip I.; Kwong, Justin; Stapp, Jennifer R.; Tulloch, Luis G.; Galanakis, Emmanouil

    2009-01-01

    The objective of this study was to investigate the trends and patterns of resistance in β-lactamase-producing members of the family Enterobacteriaceae in a children's hospital over a 9-year period (1999 to 2007). Clinically significant isolates of the Enterobacteriaceae were screened for patterns of broad-spectrum resistance to β-lactams. The strains likely to be resistant were subsequently confirmed by an inhibitor-based disc test. The plasmid-mediated resistance determinants in these isolat...

  4. Discovery of New Imidazole Derivatives Containing the 2,4-Dienone Motif with Broad-Spectrum Antifungal and Antibacterial Activity

    OpenAIRE

    Chunli Liu; Ce Shi; Fei Mao; Yong Xu; Jinyan Liu; Bing Wei; Jin Zhu; Mingjie Xiang; Jian Li

    2014-01-01

    A compound containing an imidazole moiety and a 2,4-dienone motif with significant activity toward several fungi was discovered in a screen for new antifungal compounds. Then, a total of 26 derivatives of this compound were designed, synthesized and evaluated through in vitro and in vivo antifungal activity assays. Several compounds exhibited improved antifungal activities compared to the lead compound. Of the derivatives, compounds 31 and 42 exhibited strong, broad-spectrum inhibitory effect...

  5. Rhizoctonia web blight

    Science.gov (United States)

    Rhizoctonia web blight, caused by several Rhizoctonia spp., is an important disease of evergreen azaleas and other ornamental plants in nurseries. The primary pathogens causing web blight are binucleate Rhizoctonia anastomosis groups (AG) (= Ceratobasidium D.P. Rogers, teleomorph). In southern AL an...

  6. Tagging RAPD markers to a bacterial blight resistance gene in rice

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@The somaclonal mutant HX_3 has shown a broad spectrum resistance to bacterial blight. To study the inheritance of the bacterial blight resistance in HX_3, a cross was made between HX_3 and a susceptible cultivar Longtefu A. The F2 population of 418 plants was inoculated with Chinese bacterial blight strain Zhe 173 (pathotype Ⅳ ). Results showed that the F2 progenies segregated in a ratio of 3R∶ 1S (324 resistant plants and 94 susceptible plants). From the plants tested, 114 individuals (86 resistant and 28 susceptible) were chosen randomly for RAPD analysis. Twelve highly resistant and 12 highly susceptible plants were selected to form a resistant pool and a susceptible pool, respectively.

  7. Safety and pharmacological characterization of the molecular tweezer CLR01 - a broad-spectrum inhibitor of amyloid proteins' toxicity.

    OpenAIRE

    Attar, A.; Chan, WTC; Klärner, FG; Schrader, T.; Bitan, G.

    2014-01-01

    The "molecular tweezer" CLR01 is a broad-spectrum inhibitor of abnormal protein self-assembly, which acts by binding selectively to Lys residues. CLR01 has been tested in several in vitro and in vivo models of amyloidoses all without signs of toxicity. With the goal of developing CLR01 as a therapeutic drug for Alzheimer's disease and other amyloidoses, here we studied its safety and pharmacokinetics. Toxicity studies were performed in 2-m old wild-type mice. Toxicity was evaluated by serum c...

  8. Safety and pharmacological characterization of the molecular tweezer CLR01 – a broad-spectrum inhibitor of amyloid proteins’ toxicity

    OpenAIRE

    Attar, Aida; Chan, Wai-Ting Coco; Klärner, Frank-Gerrit; Schrader, Thomas; Bitan, Gal

    2014-01-01

    Background The “molecular tweezer” CLR01 is a broad-spectrum inhibitor of abnormal protein self-assembly, which acts by binding selectively to Lys residues. CLR01 has been tested in several in vitro and in vivo models of amyloidoses all without signs of toxicity. With the goal of developing CLR01 as a therapeutic drug for Alzheimer’s disease and other amyloidoses, here we studied its safety and pharmacokinetics. Methods Toxicity studies were performed in 2-m old wild-type mice. Toxicity was e...

  9. The investigation of copper-based impregnated activated carbons prepared from water-soluble materials for broad spectrum respirator applications

    International Nuclear Information System (INIS)

    The preparation of impregnated activated carbons (IACs) from aqueous, copper-containing solutions for broad spectrum gas filtration applications is studied here. Several samples were studied to determine the effect that impregnant loading, impregnant distribution and impregnant recipe had on the overall performance. Dynamic flow testing was used to determine the gas filtration capacity of the IAC samples versus a variety of challenge gases. X-ray diffraction (XRD), scanning electron microscopy (SEM) and energy dispersive X-ray analysis (EDX) were used to characterize the impregnant distribution on the carbon as a function of impregnant loading. Oven tests were performed to determine the thermal stability of the IAC samples exposed to elevated temperatures. The role impregnant distribution plays in gas filtration capacity and the overall performance of the IAC samples is discussed. The IAC samples prepared in this work were found to have gas filtration capacities as good as or better than broad spectrum respirator carbon samples prepared from the patent literature. IACs impregnated with an aqueous 2.4 M Cu(NO3)2/0.04 M H3PO4.12MoO3/4 M HNO3 solution that were heated to 200 deg. C under argon were found to have the best overall performance of the samples studied in this work.

  10. Novel engineered cationic antimicrobial peptides display broad-spectrum activity against Francisella tularensis, Yersinia pestis and Burkholderia pseudomallei.

    Science.gov (United States)

    Abdelbaqi, Suha; Deslouches, Berthony; Steckbeck, Jonathan; Montelaro, Ronald; Reed, Douglas S

    2016-02-01

    Broad-spectrum antimicrobials are needed to effectively treat patients infected in the event of a pandemic or intentional release of a pathogen prior to confirmation of the pathogen's identity. Engineered cationic antimicrobial peptides (eCAPs) display activity against a number of bacterial pathogens including multi-drug-resistant strains. Two lead eCAPs, WLBU2 and WR12, were compared with human cathelicidin (LL-37) against three highly pathogenic bacteria: Francisella tularensis, Yersinia pestis and Burkholderia pseudomallei. Both WLBU2 and WR12 demonstrated bactericidal activity greater than that of LL-37, particularly against F. tularensis and Y. pestis. Only WLBU2 had bactericidal activity against B. pseudomallei. WLBU2, WR12 and LL-37 were all able to inhibit the growth of the three bacteria in vitro. Because these bacteria can be facultative intracellular pathogens, preferentially infecting macrophages and dendritic cells, we evaluated the activity of WLBU2 against F. tularensis in an ex vivo infection model with J774 cells, a mouse macrophage cell line. In that model WLBU2 was able to achieve greater than 50 % killing of F. tularensis at a concentration of 12.5 μM. These data show the therapeutic potential of eCAPs, particularly WLBU2, as a broad-spectrum antimicrobial for treating highly pathogenic bacterial infections. PMID:26673248

  11. The investigation of copper-based impregnated activated carbons prepared from water-soluble materials for broad spectrum respirator applications

    Energy Technology Data Exchange (ETDEWEB)

    Smith, J.W.H.; Westreich, P.; Abdellatif, H.; Filbee-Dexter, P.; Smith, A.J. [Department of Physics and Atmospheric Science, Dalhousie University, Halifax, Nova Scotia, B3H 3J5 (Canada); Wood, T.E. [3M Company, St. Paul, MN, 55144 (United States); Croll, L.M.; Reynolds, J.H. [3M Canada Company, Brockville, Ontario, K6V 5V8 (Canada); Dahn, J.R., E-mail: jeff.dahn@dal.ca [Department of Physics and Atmospheric Science, Dalhousie University, Halifax, Nova Scotia, B3H 3J5 (Canada); Department of Chemistry, Dalhousie University, Halifax, Nova Scotia, B3H 4J3 (Canada)

    2010-08-15

    The preparation of impregnated activated carbons (IACs) from aqueous, copper-containing solutions for broad spectrum gas filtration applications is studied here. Several samples were studied to determine the effect that impregnant loading, impregnant distribution and impregnant recipe had on the overall performance. Dynamic flow testing was used to determine the gas filtration capacity of the IAC samples versus a variety of challenge gases. X-ray diffraction (XRD), scanning electron microscopy (SEM) and energy dispersive X-ray analysis (EDX) were used to characterize the impregnant distribution on the carbon as a function of impregnant loading. Oven tests were performed to determine the thermal stability of the IAC samples exposed to elevated temperatures. The role impregnant distribution plays in gas filtration capacity and the overall performance of the IAC samples is discussed. The IAC samples prepared in this work were found to have gas filtration capacities as good as or better than broad spectrum respirator carbon samples prepared from the patent literature. IACs impregnated with an aqueous 2.4 M Cu(NO{sub 3}){sub 2}/0.04 M H{sub 3}PO{sub 4}.12MoO{sub 3}/4 M HNO{sub 3} solution that were heated to 200 deg. C under argon were found to have the best overall performance of the samples studied in this work.

  12. Changes in Cell Viability of Wounded Fibroblasts following Laser Irradiation in Broad-Spectrum or Infrared Light

    International Nuclear Information System (INIS)

    Objective. This study aimed to establish if broad-spectrum or infrared (IR) light in combination with laser therapy can assist phototherapy to improve the cell function of wounded cells. Background. The effect of laser light may be partly or completely reduced by broad-spectrum light. Methods. Wounded human skin fibroblasts were irradiated with 5 J/cm2 using a helium-neon laser, a diode laser, or an Nd:YAG laser in the dark, in the light, or in IR. Changes in cell viability were evaluated by cell morphology, ATP cell viability, LDH membrane integrity, and caspase 3/7 as an early marker of apoptosis. Results. Wounded cells exposed to 5 J/cm2 using 632.8 nm in the dark or 830 nm in the light or 1064 nm in the dark showed an increase in ATP viability, an increase in cytokine expression, and a decrease in LDH cytotoxicity indicating that the metabolic activity of the wounded cells was stimulated. Conclusion. Wounded cells irradiated in IR light showed an undesirable thermal effect that was proportional to the duration of exposure.

  13. Potential Broad Spectrum Inhibitors of the Coronavirus 3CLpro: A Virtual Screening and Structure-Based Drug Design Study

    Directory of Open Access Journals (Sweden)

    Michael Berry

    2015-12-01

    Full Text Available Human coronaviruses represent a significant disease burden; however, there is currently no antiviral strategy to combat infection. The outbreak of severe acute respiratory syndrome (SARS in 2003 and Middle East respiratory syndrome (MERS less than 10 years later demonstrates the potential of coronaviruses to cross species boundaries and further highlights the importance of identifying novel lead compounds with broad spectrum activity. The coronavirus 3CLpro provides a highly validated drug target and as there is a high degree of sequence homology and conservation in main chain architecture the design of broad spectrum inhibitors is viable. The ZINC drugs-now library was screened in a consensus high-throughput pharmacophore modeling and molecular docking approach by Vina, Glide, GOLD and MM-GBSA. Molecular dynamics further confirmed results obtained from structure-based techniques. A highly defined hit-list of 19 compounds was identified by the structure-based drug design methodologies. As these compounds were extensively validated by a consensus approach and by molecular dynamics, the likelihood that at least one of these compounds is bioactive is excellent. Additionally, the compounds segregate into 15 significantly dissimilar (p < 0.05 clusters based on shape and features, which represent valuable scaffolds that can be used as a basis for future anti-coronaviral inhibitor discovery experiments. Importantly though, the enriched subset of 19 compounds identified from the larger library has to be validated experimentally.

  14. Potential Broad Spectrum Inhibitors of the Coronavirus 3CLpro: A Virtual Screening and Structure-Based Drug Design Study.

    Science.gov (United States)

    Berry, Michael; Fielding, Burtram C; Gamieldien, Junaid

    2015-12-01

    Human coronaviruses represent a significant disease burden; however, there is currently no antiviral strategy to combat infection. The outbreak of severe acute respiratory syndrome (SARS) in 2003 and Middle East respiratory syndrome (MERS) less than 10 years later demonstrates the potential of coronaviruses to cross species boundaries and further highlights the importance of identifying novel lead compounds with broad spectrum activity. The coronavirus 3CL(pro) provides a highly validated drug target and as there is a high degree of sequence homology and conservation in main chain architecture the design of broad spectrum inhibitors is viable. The ZINC drugs-now library was screened in a consensus high-throughput pharmacophore modeling and molecular docking approach by Vina, Glide, GOLD and MM-GBSA. Molecular dynamics further confirmed results obtained from structure-based techniques. A highly defined hit-list of 19 compounds was identified by the structure-based drug design methodologies. As these compounds were extensively validated by a consensus approach and by molecular dynamics, the likelihood that at least one of these compounds is bioactive is excellent. Additionally, the compounds segregate into 15 significantly dissimilar (p < 0.05) clusters based on shape and features, which represent valuable scaffolds that can be used as a basis for future anti-coronaviral inhibitor discovery experiments. Importantly though, the enriched subset of 19 compounds identified from the larger library has to be validated experimentally. PMID:26694449

  15. The effect of Pythium oligandrum and chitosan used in control of potato against late blight and the occurrence of fungal diseases on tuber peel.

    Science.gov (United States)

    Kurzawińska, H; Mazur, S

    2007-01-01

    The aim of two year investigation was the valuation the effect of biopreparate Polyversum (B.A.S. Pythium oligandrum) and preparate Biochikol 020 PC (B.A.S. chitosan) used in control of potato against Phytophthora blight on the tuber infestation during storage by Helminthosporium solani and tuber infestation by sclerotia of Rhizoctonia solani. As the standard fungicide Vitavax 200 FS (B.A.S. karboxin and thiuram) was used. After harvesting 100 tubers from each plots was collected and put in storage. The analysis of tuber infestation by Rhizoctonia solani and Helminthosporium solani was made after harvesting (September) and later every 3 months during storage period (December, March). The percent of diseased tubers in tested sample and also infestation degree of bulbs using 5-degree scale was estimated. The received results of investigations ascertained, that all tested preparations during potato vegetation influenced on lower (in comparison with control) degree of bulbs infestation by sclerots of Rhizoctonia solani and the mean degree of infestation by Helminthosporium solani. Moreover the percent of diseased tubers infected by pathogens with tested preparations combination was significant lower than in control. PMID:18396836

  16. Seleção simultânea para qualidade do fruto e resistência à requeima em progênies de tomateiro Simultaneous selection for fruit quality and resistance to late blight in tomato progenies

    Directory of Open Access Journals (Sweden)

    Carlos Nick

    2013-01-01

    Full Text Available O objetivo deste trabalho foi avaliar critérios de seleção em progênies de cruzamento entre a cultivar de tomateiro Santa Clara (Solanum lycopersicum e a espécie silvestre S. habrochaites f. glabratum, quanto a atributos de qualidade dos frutos e de resistência à requeima (Phytophthora infestans. As famílias foram avaliadas em delineamento de blocos ao acaso, em dois ensaios, com duas repetições e seis testemunhas comuns a ambos os ensaios. Ganhos diretos e indiretos foram estimados entre famílias F2:3 para seleção simultânea quanto à resistência à requeima, determinada pela quantificação da área abaixo da curva de progresso da doença (AACPD, e quanto à acidez titulável e aos teores de sólidos solúveis dos frutos. Os critérios de seleção proporcionaram ganhos genéticos satisfatórios, adequados ao ideótipo proposto de decréscimo na AACPD e de incremento nos valores médios de sólidos solúveis e acidez titulável. A seleção direta e indireta e o índice de Mulamba & Mock resultam em ganhos individuais mais equilibrados e em maiores ganhos totais.The objective of this work was to evaluate selection criteria in progenies from the crossing of tomato cultivar Santa Clara (Solanum lycopersicum and the wild species S. habrochaites f. glabratum as to attributes of fruit quality and of resistance to late blight (Phytophthora infestans. The families were evaluated in a randomized block design, in two trials, with two replicates and six controls, common to both trials. Direct and indirect gains were estimated between F2:3 families for simultaneous selection regarding resistance to late blight, determined by the quantification of the area under the disease progress curve (AUDPC, and regarding titratable acidity and soluble solid contents of fruit. The selection criteria provided satisfactory genetic gains, suitable for the proposed ideotype of decreases in the AUDPC and increases in the average values of soluble solids and

  17. Resistance of Antimicrobial Peptide Gene Transgenic Rice to Bacterial Blight

    Institute of Scientific and Technical Information of China (English)

    WANG Wei; WU Chao; LIU Mei; LIU Xu-ri; Hu Guo-cheng; SI Hua-min; SUN Zong-xiu; LIU Wen-zhen; Fu Ya-ping

    2011-01-01

    Antimierobial peptide is a polypeptide with antimicrobial activity.Antimicrobial peptide genes Np3 and Np5 from Chinese shrimp (Fenneropenaeus Chinensis) were integrated into Oryza sativa L.subsp.japonica cv.Aichi ashahi by Agrobacterium mediated transformation system.PCR analysis showed that the positive ratios of Np3 and Np5 were 36% and 45% in T0 generation,respectively.RT-PCR analysis showed that the antimicrobial peptide genes were expressed in T1 generation,and there was no obvious difference in agronomic traits between transgenic plants and non-transgenic plants.Four Np3 and Np5 transgenic lines in T1 generation were inoculated with ×anthomonas oryzae pv.oryzae strain CR4,and all the four transgenic lines had significantly enhanced resistance to bacterial blight caused by the strain CR4.The Np5 transgenic lines also showed higher resistance to bacterial blight caused by strains JS97-2,Zhe 173 and OS-225.It is suggested that transgenic lines with Np5 gene might possess broad spectrum resistance to rice bacterial blight.

  18. TEM-4, a new plasmid-mediated beta-lactamase that hydrolyzes broad-spectrum cephalosporins in a clinical isolate of Escherichia coli.

    OpenAIRE

    Paul, G C; Gerbaud, G; Bure, A; Philippon, A M; B. Pangon; Courvalin, P.

    1989-01-01

    A clinical isolate of Escherichia coli, strain CB-134, recovered in 1986 from an abdominal abscess, exhibited resistance to penams, oxyimino-beta-lactams including broad-spectrum cephalosporins (cefotaxime, ceftriaxone, ceftazidime), and aztreonam but remained susceptible to cephamycins (cefoxitin, cefotetan) and to moxalactam and imipenem. Clavulanate (2 micrograms/ml) restored the susceptibility of the strain to broad-spectrum cephalosporins and aztreonam. A beta-lactamase with an isoelectr...

  19. BRS Eliza: cultivar de batata para mesa, com película lisa e resistência à pinta-preta e à requeima BRS Eliza: a fresh market potato cultivar, with smooth skin and early and late blight resistance

    Directory of Open Access Journals (Sweden)

    Arione S. Pereira

    2001-11-01

    Full Text Available BRS Eliza é uma cultivar de batata para consumo de mesa liberada em 2001, pela Embrapa Clima Temperado, Pelotas (RS. É mais adequada ao preparo de purê e salada (cremosa. O ciclo é médio. Os tubérculos têm formato oval, película lisa e amarela, pouca sensibilidade ao esverdeamento, polpa amarelo-clara e olhos superficiais. Não mostrou defeitos fisiológicos nos tubérculos. Tem boa resistência de campo à requeima (Phytophthora infestans e à pinta- preta (Alternaria solani e mediana a viroses. BRS Eliza é suscetível à canela-preta (Erwinia carotovara. Produz alta percentagem de tubérculos de tamanho comercial. Deve ser comercialisada imediatamente após a colheita, requerendo manejo cuidadoso da semente no armazenamentoBRS Eliza is a tablestock potato cultivar released in 2001, by Embrapa Clima Temperado, Pelotas, Brazil. It is adequate for purée and salad. Maturity is medium early. Tubers are oval shaped, yellow and smooth skin, low sensitivity to greening, yellow clear flesh and shallow eyes. BRS Eliza did not show physiological defects on the tubers. Has a good field resistance to late (Phytophthora infestans and early blight (Alternaria solani, and medium resistance to main viroses. BRS Eliza is susceptible to black leg (Erwinia carotovora. It produces a high percentage of commercial tubers. Must be marketed immediately after harvesting. It requires accurate seed management in storage.

  20. Vancomycin and Five Broad-spectrum Antibiotic Utilization Evaluation in an Educational Medical Center in One Year

    Directory of Open Access Journals (Sweden)

    SiminDokht Shoaei

    2015-10-01

    Full Text Available  Background: Antibiotics can be life saving if they are used correctly, and can have unwanted side effects specially resistance with incorrect use. Unfortunately in fear of no response, physicians use broad spectrum antibiotics meticulously. In this Drug Utilization Evaluation (DUE, improper use of Vancomycin and five broad-spectrum antibiotics are studied to find faults and solution for this problem. Methods:This descriptive cross-sectional study performed during the March of 2012 to March of 2013.DUE of Imipenem, Meropenem, Piperacillin-Tazobactam, Cefepime, Ciprofloxacin and Vancomycin was done in 6 wards of Imam Hossein Hospital in Tehran. Demographic, clinical, laboratory, imaging and treatment data were looked for in medical records of 686 patients. Evaluation was done by three infectious disease specialist based on reference text book of Mandell’s Principles and Practice of Infectious Diseases 2010 and IDSA Guidelines. Results:This study showed 38.5% of prescriptions were correct and the remained 61.5% were incorrect with different faults predominantly incorrect overuse in 51.1%.Ciprofloxacin was the most common incorrect used drug in 74.8% cases and Piperacillin-Tazobactam with 48.7% cases had the least common incorrect use. There was no fault in prescription of antibiotics observing age and sex (pregnancy, breast feeding factors. Conclusions:Our results reveal a significant high level of the inappropriate use of Antibiotics mostly as overuse and empirically without culture results. It is needed to establish continuing medical education (CME courses and a locally conformable guideline of antibiotic use based on antibiogram results.

  1. Alginate microbead-encapsulated silver complexes for selective delivery of broad-spectrum silver-based microbicides.

    Science.gov (United States)

    Damelin, Leonard H; Fernandes, Manuel A; Tiemessen, Caroline T

    2015-10-01

    In sub-Saharan Africa, human immunodeficiency virus (HIV) infections are predominantly acquired via heterosexual contact, and women are at greatest risk of being infected. This region also has the highest rates of sexually transmitted infections (STIs) per capita worldwide; STIs are strongly associated with increased HIV transmission. Therefore, there is an urgent requirement for microbicides that are active against HIV and STIs. Silver compounds exhibit broad antimicrobial activity, making them potentially ideal broad-spectrum microbicides. However, for silver compounds to be effective microbicides, they must be active within seminal fluid and the delivery vehicle used must protect the silver microbicide from vaginal fluid components but selectively release it during intercourse and/or following ejaculation. In this study, silver complexes were synthesised from the ligands saccharin, benzimidazole and 8-hydroxyquinoline and their microbicidal activity was assessed. We show that a silver saccharinate-benzimidazole complex (AgSB) exhibited activity against HIV-1, herpes simplex virus type 2 (HSV-2) and Neisseria gonorrhoeae at concentrations significantly below LD(50) levels for the vaginal mucosal cell line SiHa. Furthermore, we show that alginate microbeads are stable in vaginal fluid simulant but rapidly dissolve in seminal fluid simulant. Finally, we have established that microbead-encapsulated AgSB, dissolved in seminal fluid simulant, is active against the above pathogens, albeit at higher concentrations for HIV-1. This research therefore highlights, for the first time, the potential use of silver complexes encapsulated in alginate microbeads as a novel system for the delivery and selective release of broad-spectrum silver-based microbicides within the vaginal milieu during sexual intercourse/after ejaculation. PMID:26184337

  2. Inheritance and Molecular Mapping of New Genes Conferring Late Blight and CPB Resistance in Mexican Wild Potato Species Solanum pinnatisectum%墨西哥野生马铃薯Solanum pinnatisectum抗晚疫病及抗马铃薯甲虫新基因的遗传分析与分子标记

    Institute of Scientific and Technical Information of China (English)

    陈勤; 孙慧生; 杨继良; 李海燕; Sanjib Nandy; Debbie Beasley; 王冬冬; Mark Goettel

    2009-01-01

    因.同时分离与甲虫抗性密相关的分子标记的工作正在进行中.%Late blight (Phytophthora infestans) and Colorado potato beetle (CPB) are the most disastrous disease and insect problem of potatoes. Development of high levels of late blight and CPB resistant potatoes has become a high priority for the Canadian potato breeding program. New genes for late blight and CPB resistance have been identified in a wild 1EBN diploid Mexican species Solanum pinnatisectum which has been successfully transferred via protoplast fusion to the cultivated potato background. However, development of new potato cultivars with late blight and CPB resistance has been a difficult and cumbersome task. To accelerate the isolation of the resistant genes, molecular DNA markers tightly linked to the resistance are needed. In this study, a susceptible diploid potato S. Cardiophyllum was selected as the male parent to cross with S. Pin-natisectum. The F1 and BC1 populations were assessed for resistance to late blight and CPB by the detached leaf method. Dis-ease test using US-8/A2 mating type isolate revealed that all of the F1 individuals were resistant to the late blight. The ratio of late blight resistant plants to susceptible plants was 1 : 1 in BC1 populations. The results confirmed that a single dominant gene Rpil for late blight resistance was present in S. Pinnatisectum. For CPB resistance, a 1:3 resistant to susceptible ratio in BC1 populations confirmed polygenic inheritance. Molecular marker analysis combined with bulked segregating analysis (BSA) was carried out in the F1 and BC1 populations for fine mapping late blight resistant gene Rpi1 in S. Pinnatisectum. Twenty seven specific PCR primers were designed from sequence information of EST and STS markers located between RFLP markers TG20A and CP56 on potato chromosome Ⅶ. Several new DNA markers showed the linkage relation with the late blight resistant gene Rpi1. The analysis of a large number of individual plants

  3. Studies on fire blight.

    NARCIS (Netherlands)

    Schouten, H.J.

    1991-01-01

    Part 1Effects of water potential and temperature on multiplication of and pressure by Erwinia amylovora in host plantsAnalysis of field data from Eve Billing, England, on the duration of the incubation period of fire blight revealed that temperature and rainfall wer

  4. Silver Nanoparticles: Biosynthesis Using an ATCC Reference Strain of Pseudomonas aeruginosa and Activity as Broad Spectrum Clinical Antibacterial Agents

    Science.gov (United States)

    Quinteros, Melisa A.; Aiassa Martínez, Ivana M.; Dalmasso, Pablo R.; Páez, Paulina L.

    2016-01-01

    Currently, the biosynthesis of silver-based nanomaterials attracts enormous attention owing to the documented antimicrobial properties of these ones. This study reports the extracellular biosynthesis of silver nanoparticles (Ag-NPs) using a Pseudomonas aeruginosa strain from a reference culture collection. A greenish culture supernatant of P. aeruginosa incubated at 37°C with a silver nitrate solution for 24 h changed to a yellowish brown color, indicating the formation of Ag-NPs, which was confirmed by UV-vis spectroscopy, transmission electron microscopy, and X-ray diffraction. TEM analysis showed spherical and pseudospherical nanoparticles with a distributed size mainly between 25 and 45 nm, and the XRD pattern revealed the crystalline nature of Ag-NPs. Also it provides an evaluation of the antimicrobial activity of the biosynthesized Ag-NPs against human pathogenic and opportunistic microorganisms, namely, Staphylococcus aureus, Staphylococcus epidermidis, Enterococcus faecalis, Proteus mirabilis, Acinetobacter baumannii, Escherichia coli, P. aeruginosa, and Klebsiella pneumonia. Ag-NPs were found to be bioactive at picomolar concentration levels showing bactericidal effects against both Gram-positive and Gram-negative bacterial strains. This work demonstrates the first helpful use of biosynthesized Ag-NPs as broad spectrum bactericidal agents for clinical strains of pathogenic multidrug-resistant bacteria such as methicillin-resistant S. aureus, A. baumannii, and E. coli. In addition, these Ag-NPs showed negligible cytotoxic effect in human neutrophils suggesting low toxicity to the host. PMID:27340405

  5. A novel alkaloid from marine-derived actinomycete Streptomyces xinghaiensis with broad-spectrum antibacterial and cytotoxic activities.

    Directory of Open Access Journals (Sweden)

    Wence Jiao

    Full Text Available Due to the increasing emergence of drug-resistant bacteria and tumor cell lines, novel antibiotics with antibacterial and cytotoxic activities are urgently needed. Marine actinobacteria are rich sources of novel antibiotics, and here we report the discovery of a novel alkaloid, xinghaiamine A, from a marine-derived actinomycete Streptomyces xinghaiensis NRRL B24674(T. Xinghaiamine A was purified from the fermentation broth, and its structure was elucidated based on extensive spectroscopic analysis, including 1D and 2D NMR spectrum as well as mass spectrometry. Xinghaiamine A was identified to be a novel alkaloid with highly symmetric structure on the basis of sulfoxide functional group, and sulfoxide containing compound has so far never been reported in microorganisms. Biological assays revealed that xinghaiamine A exhibited broad-spectrum antibacterial activities to both Gram-negative persistent hospital pathogens (e.g. Acinetobacter baumannii, Pseudomonas aeruginosa and Escherichia coli and Gram-positive ones, which include Staphylococcus aureus and Bacillus subtilis. In addition, xinghaiamine A also exhibited potent cytotoxic activity to human cancer cell lines of MCF-7 and U-937 with the IC50 of 0.6 and 0.5 µM, respectively.

  6. Structures of mammalian ER α-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.

    Science.gov (United States)

    Caputo, Alessandro T; Alonzi, Dominic S; Marti, Lucia; Reca, Ida-Barbara; Kiappes, J L; Struwe, Weston B; Cross, Alice; Basu, Souradeep; Lowe, Edward D; Darlot, Benoit; Santino, Angelo; Roversi, Pietro; Zitzmann, Nicole

    2016-08-01

    The biosynthesis of enveloped viruses depends heavily on the host cell endoplasmic reticulum (ER) glycoprotein quality control (QC) machinery. This dependency exceeds the dependency of host glycoproteins, offering a window for the targeting of ERQC for the development of broad-spectrum antivirals. We determined small-angle X-ray scattering (SAXS) and crystal structures of the main ERQC enzyme, ER α-glucosidase II (α-GluII; from mouse), alone and in complex with key ligands of its catalytic cycle and antiviral iminosugars, including two that are in clinical trials for the treatment of dengue fever. The SAXS data capture the enzyme's quaternary structure and suggest a conformational rearrangement is needed for the simultaneous binding of a monoglucosylated glycan to both subunits. The X-ray structures with key catalytic cycle intermediates highlight that an insertion between the +1 and +2 subsites contributes to the enzyme's activity and substrate specificity, and reveal that the presence of d-mannose at the +1 subsite renders the acid catalyst less efficient during the cleavage of the monoglucosylated substrate. The complexes with iminosugar antivirals suggest that inhibitors targeting a conserved ring of aromatic residues between the α-GluII +1 and +2 subsites would have increased potency and selectivity, thus providing a template for further rational drug design. PMID:27462106

  7. Characterization of a type-I crustin with broad-spectrum antimicrobial activity from red swamp crayfish Procambarus clarkii.

    Science.gov (United States)

    Liu, Ning; Zhang, Ran-Ran; Fan, Zhen-Xu; Zhao, Xiao-Fan; Wang, Xian-Wei; Wang, Jin-Xing

    2016-08-01

    Crustins are a family of antimicrobial peptides mainly identified in crustaceans and characterized by a whey acidic protein (WAP) domain and an additional glycine-, cysteine-, or proline-rich region. In this study, we identified and characterized PcCru, a new crustin isolated from red swamp crayfish Procambarus clarkii. The open reading frame of PcCru was 333 base pairs long and encoded a 110-residue polypeptide, which contained a signal peptide, a cysteine-rich region, and a WAP domain. The architecture and phylogenetic analysis suggested that PcCru was a new member of the type-I crustin family. PcCru was highly expressed in hemocytes and was significantly induced by viral and bacterial stimulations at both the translational and transcriptional levels. The titer of PcCru in circulating plasma was also increased considerably by bacterial challenge. Recombinant PcCru from both prokaryotic and eukaryotic expression systems were generated, and the proteins exhibited broad-spectrum antimicrobial activity. Furthermore, PcCru protected crayfish from infection by pathogenic bacteria Aeromonas hydrophila in vivo. This study provided new information emphasizing the important role of the crustin family in the crustacean antibacterial immune response. PMID:27021077

  8. Choline and Geranate Deep Eutectic Solvent as a Broad-Spectrum Antiseptic Agent for Preventive and Therapeutic Applications.

    Science.gov (United States)

    Zakrewsky, Michael; Banerjee, Amrita; Apte, Sanjana; Kern, Theresa L; Jones, Mattie R; Sesto, Rico E Del; Koppisch, Andrew T; Fox, David T; Mitragotri, Samir

    2016-06-01

    Antiseptic agents are the primary arsenal to disinfect skin and prevent pathogens spreading within the host as well as into the surroundings; however the Food and Drug Administration published a report in 2015 requiring additional validation of nearly all current antiseptic agents before their continued use can be allowed. This vulnerable position calls for urgent identification of novel antiseptic agents. Recently, the ability of a deep eutectic, Choline And Geranate (CAGE), to treat biofilms of Pseudomonas aeruginosa and Salmonella enterica was demonstrated. Here it is reported that CAGE exhibits broad-spectrum antimicrobial activity against a number of drug-resistant bacteria, fungi, and viruses including clinical isolates of Mycobacterium tuberculosis, Staphylococcus aureus, and Candida albicans as well as laboratory strains of Herpes Simplex Virus. Studies in human keratinocytes and mice show that CAGE affords negligible local or systemic toxicity, and an ≈180-14 000-fold improved efficacy/toxicity ratio over currently used antiseptic agents. Further, CAGE penetrates deep into the dermis and treats pathogens located in deep skin layers as confirmed by the ability of CAGE in vivo to treat Propionibacterium acnes infection. In combination, the results clearly demonstrate CAGE holds promise as a transformative platform antiseptic agent for preventive as well as therapeutic applications. PMID:26959835

  9. Development of forecasting elements for minimization of fungicide treatment in potato protection against early blight in Moscow region

    OpenAIRE

    Penjkin Roman V.; Doroškina Ljudmila A.; Smirnov Aleksej N.

    2013-01-01

    Early blight of potato (the agent is imperfect fungus Alternaria alternata (Fr.) Keissl.) is a serious disease of potatoes under hot conditions. This disease is important in the regions of Eastern and Southern Europe, Asia and Africa. It is controlled with intensive application of fungicides commonly used against late blight. However, currently fungicides cause undesirable damage to humans and the environment. Elements of forecasting the early blight have been developed in order to mini...

  10. Evaluation of Different Protectant and Eradicant Fungicides Against Early and Late Blight of Potato Caused by Alternaria solani (Ellis and Mart) Jones and Grout and Pytophthora infestans (Mont.) De Bary under Field Conditions

    OpenAIRE

    Ejaz Parvez; Shahid Hussain; Abdul Rashid; M. Zafar Ahmad

    2003-01-01

    Recommended doses (200-250 gm acre-1) of five protectant and eradicant fungicides viz Banko (Chlorothalonil) 500 Sc, Score (Difenoconazole) 250 Ec, AcrobatMZ 90/600 WP, Metalaxyl+Mancozeb) 72 WP and Ridomil Gold (Mancozeb+Metalaxyl) 68 WP were tested against early and late blight diseases development on ten potato advance lines/varieties sown in a randomized complete block design in the research area of a private farm at Chiniot. All the fungicides reduced disease severity on most of the line...

  11. Reversal of the Progression of Fatal Coronavirus Infection in Cats by a Broad-Spectrum Coronavirus Protease Inhibitor.

    Directory of Open Access Journals (Sweden)

    Yunjeong Kim

    2016-03-01

    Full Text Available Coronaviruses infect animals and humans causing a wide range of diseases. The diversity of coronaviruses in many mammalian species is contributed by relatively high mutation and recombination rates during replication. This dynamic nature of coronaviruses may facilitate cross-species transmission and shifts in tissue or cell tropism in a host, resulting in substantial change in virulence. Feline enteric coronavirus (FECV causes inapparent or mild enteritis in cats, but a highly fatal disease, called feline infectious peritonitis (FIP, can arise through mutation of FECV to FIP virus (FIPV. The pathogenesis of FIP is intimately associated with immune responses and involves depletion of T cells, features shared by some other coronaviruses like Severe Acute Respiratory Syndrome Coronavirus. The increasing risks of highly virulent coronavirus infections in humans or animals call for effective antiviral drugs, but no such measures are yet available. Previously, we have reported the inhibitors that target 3C-like protease (3CLpro with broad-spectrum activity against important human and animal coronaviruses. Here, we evaluated the therapeutic efficacy of our 3CLpro inhibitor in laboratory cats with FIP. Experimental FIP is 100% fatal once certain clinical and laboratory signs become apparent. We found that antiviral treatment led to full recovery of cats when treatment was started at a stage of disease that would be otherwise fatal if left untreated. Antiviral treatment was associated with a rapid improvement in fever, ascites, lymphopenia and gross signs of illness and cats returned to normal health within 20 days or less of treatment. Significant reduction in viral titers was also observed in cats. These results indicate that continuous virus replication is required for progression of immune-mediated inflammatory disease of FIP. These findings may provide important insights into devising therapeutic strategies and selection of antiviral compounds for

  12. Exoproteome and secretome derived broad spectrum novel drug and vaccine candidates in Vibrio cholerae targeted by Piper betel derived compounds.

    Directory of Open Access Journals (Sweden)

    Debmalya Barh

    Full Text Available Vibrio cholerae is the causal organism of the cholera epidemic, which is mostly prevalent in developing and underdeveloped countries. However, incidences of cholera in developed countries are also alarming. Because of the emergence of new drug-resistant strains, even though several generic drugs and vaccines have been developed over time, Vibrio infections remain a global health problem that appeals for the development of novel drugs and vaccines against the pathogen. Here, applying comparative proteomic and reverse vaccinology approaches to the exoproteome and secretome of the pathogen, we have identified three candidate targets (ompU, uppP and yajC for most of the pathogenic Vibrio strains. Two targets (uppP and yajC are novel to Vibrio, and two targets (uppP and ompU can be used to develop both drugs and vaccines (dual targets against broad spectrum Vibrio serotypes. Using our novel computational approach, we have identified three peptide vaccine candidates that have high potential to induce both B- and T-cell-mediated immune responses from our identified two dual targets. These two targets were modeled and subjected to virtual screening against natural compounds derived from Piper betel. Seven compounds were identified first time from Piper betel to be highly effective to render the function of these targets to identify them as emerging potential drugs against Vibrio. Our preliminary validation suggests that these identified peptide vaccines and betel compounds are highly effective against Vibrio cholerae. Currently we are exhaustively validating these targets, candidate peptide vaccines, and betel derived lead compounds against a number of Vibrio species.

  13. Reduced TiO2-Graphene Oxide Heterostructure As Broad Spectrum-Driven Efficient Water-Splitting Photocatalysts.

    Science.gov (United States)

    Li, Lihua; Yu, Lili; Lin, Zhaoyong; Yang, Guowei

    2016-04-01

    The reduced TiO2-graphene oxide heterostructure as an alternative broad spectrum-driven efficient water splitting photocatalyst has become a really interesting topic, however, its syntheses has many flaws, e.g., tedious experimental steps, time-consuming, small scale production, and requirement of various additives, for example, hydrazine hydrate is widely used as reductant to the reduction of graphene oxide, which is high toxicity and easy to cause the second pollution. For these issues, herein, we reported the synthesis of the reduced TiO2-graphene oxide heterostructure by a facile chemical reduction agent-free one-step laser ablation in liquid (LAL) method, which achieves extended optical response range from ultraviolet to visible and composites TiO2-x (reduced TiO2) nanoparticle and graphene oxide for promoting charge conducting. 30.64% Ti(3+) content in the reduced TiO2 nanoparticles induces the electronic reconstruction of TiO2, which results in 0.87 eV decrease of the band gap for the visible light absorption. TiO2-x-graphene oxide heterostructure achieved drastically increased photocatalytic H2 production rate, up to 23 times with respect to the blank experiment. Furthermore, a maximum H2 production rate was measured to be 16 mmol/h/g using Pt as a cocatalyst under the simulated sunlight irradiation (AM 1.5G, 135 mW/cm(2)), the quantum efficiencies were measured to be 5.15% for wavelength λ = 365 ± 10 nm and 1.84% for λ = 405 ± 10 nm, and overall solar energy conversion efficiency was measured to be 14.3%. These findings provided new insights into the broad applicability of this methodology for accessing fascinate photocatalysts. PMID:26986700

  14. Controlled delivery of a new broad spectrum antibacterial agent against colitis: In vitro and in vivo performance.

    Science.gov (United States)

    Nieto-Bobadilla, M S; Siepmann, F; Djouina, M; Dubuquoy, L; Tesse, N; Willart, J-F; Dubreuil, L; Siepmann, J; Neut, C

    2015-10-01

    Coated pellets and mini-tablets were prepared containing a new broad spectrum antibacterial agent: CIN-102, a well-defined, synergistic blend of trans-cinnamaldehyde, trans-2-methoxycinnamaldehyde, cinnamyl acetate, linalool, β-caryophyllene, cineol and benzyl benzoate. The aim was to provide a new treatment method for colitis, especially for Inflammatory Bowel Disease (IBD) patients. Since the simple oral gavage of CIN-102 was not able to reduce the pathogenic bacteria involved in colitis (rat model), the drug was incorporated into multiparticulates. The idea was to minimize undesired drug release in the upper gastrointestinal tract and to control CIN-102 release in the colon, in order to optimize the resulting antibiotic concentration at the site of action. A particular challenge was the fact that CIN-102 is a volatile hydrophobic liquid. Pellet cores were prepared by extrusion-spheronization and coated with polymer blends, which are sensitive to colonic bacterial enzymes. Mini-tablets were prepared by direct compression. The release of the main compound of CIN-102 (cinnamaldehyde, 86.7% w/w) was monitored in vitro. Optimized coated pellets and mini-tablets were also tested in vivo: in seven-week-old, male mice suffering from dextran sodium sulfate induced colitis. Importantly, both types of multiparticulates were able: (i) to significantly reduce the number of luminal and mucosal enterobacteria in the mice (the levels of which are increased in the disease state), and (ii) to improve the clinical course of the intestinal inflammation (decrease in the percentages of mice with bloody stools and diarrhea). Thus, the proposed coated pellets and matrix mini-tablets allowing for controlled CIN-102 release show a promising potential for new treatment methods of colitis. PMID:26209123

  15. Baulamycins A and B, broad-spectrum antibiotics identified as inhibitors of siderophore biosynthesis in Staphylococcus aureus and Bacillus anthracis.

    Science.gov (United States)

    Tripathi, Ashootosh; Schofield, Michael M; Chlipala, George E; Schultz, Pamela J; Yim, Isaiah; Newmister, Sean A; Nusca, Tyler D; Scaglione, Jamie B; Hanna, Philip C; Tamayo-Castillo, Giselle; Sherman, David H

    2014-01-29

    Siderophores are high-affinity iron chelators produced by microorganisms and frequently contribute to the virulence of human pathogens. Targeted inhibition of the biosynthesis of siderophores staphyloferrin B of Staphylococcus aureus and petrobactin of Bacillus anthracis hold considerable potential as a single or combined treatment for methicillin-resistant S. aureus (MRSA) and anthrax infection, respectively. The biosynthetic pathways for both siderophores involve a nonribosomal peptide synthetase independent siderophore (NIS) synthetase, including SbnE in staphyloferrin B and AsbA in petrobactin. In this study, we developed a biochemical assay specific for NIS synthetases to screen for inhibitors of SbnE and AsbA against a library of marine microbial-derived natural product extracts (NPEs). Analysis of the NPE derived from Streptomyces tempisquensis led to the isolation of the novel antibiotics baulamycins A (BmcA, 6) and B (BmcB, 7). BmcA and BmcB displayed in vitro activity with IC50 values of 4.8 μM and 19 μM against SbnE and 180 μM and 200 μM against AsbA, respectively. Kinetic analysis showed that the compounds function as reversible competitive enzyme inhibitors. Liquid culture studies with S. aureus , B. anthracis , E. coli , and several other bacterial pathogens demonstrated the capacity of these natural products to penetrate bacterial barriers and inhibit growth of both Gram-positive and Gram-negative species. These studies provide proof-of-concept that natural product inhibitors targeting siderophore virulence factors can provide access to novel broad-spectrum antibiotics, which may serve as important leads for the development of potent anti-infective agents. PMID:24401083

  16. Comparison of nitroethane, 2-nitro-1-propanol, lauric acid, Lauricidin and the Hawaiian marine algae, Chaetoceros, for potential broad-spectrum control of anaerobically grown lactic acid bacteria

    Science.gov (United States)

    The gastrointestinal tract of bovines often contains bacteria that contribute to disorders of the rumen and may also contain foodborne or opportunistic human pathogens as well as bacteria capable of causing mastitis in cows. Thus, there is a need to develop broad-spectrum therapies that are effecti...

  17. Draft genome sequence of Streptomyces sp. strain Wb2n-11, a desert isolate with broad-spectrum antagonism against soilborne phytopathogens

    Energy Technology Data Exchange (ETDEWEB)

    Koeberl, Martina; White, Richard A.; Erschen, Sabine; El-Arabi, Tarek F.; Jansson, Janet K.; Berg, Gabriele

    2015-08-06

    Streptomyces sp. strain Wb2n-11, isolated from native desert soil, exhibited broad-spectrum antagonism against plant pathogenic fungi, bacteria and nematodes. The 8.2 Mb draft genome reveals genes putatively responsible for its promising biocontrol activity and genes which enable the soil bacterium to directly interact beneficially with plants.

  18. De Novo Whole-Genome Sequence of Micromonospora carbonacea JXNU-1 with Broad-Spectrum Antimicrobial Activity, Isolated from Soil Samples

    OpenAIRE

    Jiang, Yun; Huang, Yun-hong; Long, Zhong-er

    2015-01-01

    Micromonospora carbonacea JXNU-1 is an actinomycete with broad-spectrum antimicrobial activity, isolated from soil samples from the farmland in the area of Yaohu Lake in Nanchang, China. Here, we report the whole-genome sequence of M. carbonacea JXNU-1.

  19. Ação de acibenzolar-s-methyl isolado e em mistura com fungicidas no controle da requeima da batata Action of acibenzolar-S-methyl, isolated and in a mixture with fungicides on potato late blight control

    Directory of Open Access Journals (Sweden)

    Jesus G. Töfoli

    2005-07-01

    Full Text Available Visando avaliar o desempenho de acibenzolar-S-methyl (BTH isolado e em mistura com os fungicidas mancozeb, chlorothalonil e metaxyl-M+chlorothalonil no controle da requeima da batata, foram realizados dois experimentos em cultivos comerciais nos municípios paulistas de Pilar do Sul (cv. Baraka e Bragança Paulista (cv. Asterix, de maio a agosto e agosto a outubro de 2001, respectivamente. O delineamento experimental foi o de blocos ao acaso com 4 repetições, com cada parcela medindo 25 m². Durante os experimentos foram realizadas um total de 10 pulverizações, a intervalos de 5 a 10 dias com pulverizador costal munido de barra de aplicação contendo 5 bicos TXKV26, pressão constante (4 bar e volume médio de 800 L/ha. Avaliou-se a severidade nas folhas (0 a 100%, nas hastes ( escala de notas de 1 a 5 e a produtividade comercial de tubérculos. O BTH apresentou efeitos significativos de controle quando utilizado isolado e em mistura com fungicidas de contato e sistêmico. Os maiores aumentos relativos de produtividade foram verificados para as misturas de BTH com mancozeb e chlorothalonil.To evaluate the performance of acibenzolar-S-methyl (BTH, alone and mixed with mancozeb, chlorothalonil and metaxyl-M+chlorothalonil, for the control of potato late blight, two experiments were carried out in commercial crops in the counties of Pilar do Sul (cv. Baraka and Bragança Paulista (cv. Asterix, state of São Paulo, Brazil, from May to August and August to October 2001, respectively. The experimental design was of randomized blocks with four replications, with each plot measuring 25 m². A total of 10 sprayings was done at 5- to 10-day intervals with a backpack sprayer using a 5-nozzle (TXKV26 spray wand, constant pressure of 4 bars (58 psi and average volume of 800 L/ha. Evaluations were done in regard to the severity on the leaves (0 to 100%, on the stems (score from 1 to 5 and the commercial yield of tubers. BTH presented expressive effects

  20. Broad-spectrum matrix metalloproteinase inhibition curbs inflammation and liver injury but aggravates experimental liver fibrosis in mice.

    Directory of Open Access Journals (Sweden)

    Vincent E de Meijer

    Full Text Available BACKGROUND: Liver fibrosis is characterized by excessive synthesis of extracellular matrix proteins, which prevails over their enzymatic degradation, primarily by matrix metalloproteinases (MMPs. The effect of pharmacological MMP inhibition on fibrogenesis, however, is largely unexplored. Inflammation is considered a prerequisite and important co-contributor to fibrosis and is, in part, mediated by tumor necrosis factor (TNF-alpha-converting enzyme (TACE. We hypothesized that treatment with a broad-spectrum MMP and TACE-inhibitor (Marimastat would ameliorate injury and inflammation, leading to decreased fibrogenesis during repeated hepatotoxin-induced liver injury. METHODOLOGY/PRINCIPAL FINDINGS: Liver fibrosis was induced in mice by repeated carbon tetrachloride (CCl4 administration, during which the mice received either Marimastat or vehicle twice daily. A single dose of CCl4 was administered to investigate acute liver injury in mice pretreated with Marimastat, mice deficient in Mmp9, or mice deficient in both TNF-alpha receptors. Liver injury was quantified by alanine aminotransferase (ALT levels and confirmed by histology. Hepatic collagen was determined as hydroxyproline, and expression of fibrogenesis and fibrolysis-related transcripts was determined by quantitative reverse-transcription polymerase chain reaction. Marimastat-treated animals demonstrated significantly attenuated liver injury and inflammation but a 25% increase in collagen deposition. Transcripts related to fibrogenesis were significantly less upregulated compared to vehicle-treated animals, while MMP expression and activity analysis revealed efficient pharmacologic MMP-inhibition and decreased fibrolysis following Marimastat treatment. Marimastat pre-treatment significantly attenuated liver injury following acute CCl4-administration, whereas Mmp9 deficient animals demonstrated no protection. Mice deficient in both TNF-alpha receptors exhibited an 80% reduction of serum ALT

  1. Proteasome Accessory Factor C (pafC) Is a novel gene Involved in Mycobacterium Intrinsic Resistance to broad-spectrum antibiotics - Fluoroquinolones

    OpenAIRE

    Qiming Li; Longxiang Xie; Quanxin Long; Jinxiao Mao; Hui Li; Mingliang Zhou; Jianping Xie

    2015-01-01

    Antibiotics resistance poses catastrophic threat to global public health. Novel insights into the underlying mechanisms of action will inspire better measures to control drug resistance. Fluoroquinolones are potent and widely prescribed broad-spectrum antibiotics. Bacterial protein degradation pathways represent novel druggable target for the development of new classes of antibiotics. Mycobacteria proteasome accessory factor C (pafC), a component of bacterial proteasome, is involved in fluoro...

  2. Stepwise design, synthesis, and in vitro antifungal screening of (Z)-substituted-propenoic acid derivatives with potent broad-spectrum antifungal activity

    OpenAIRE

    Khedr MA

    2015-01-01

    Mohammed A KhedrDepartment of Pharmaceutical Chemistry, Faculty of Pharmacy, Helwan University, Cairo, EgyptAbstract: Fungal infections are a main reason for the high mortality rate worldwide. It is a challenge to design selective antifungal agents with broad-spectrum activity. Lanosterol 14α-demethylase is an attractive target in the design of antifungal agents. Seven compounds were selected from a number of designed compounds using a rational docking study. These compounds were sy...

  3. The impact of pricing and patent expiration on the demand for pharmaceuticals: An examination of the use of broad-spectrum antimicrobials

    OpenAIRE

    Kaier, Klaus

    2010-01-01

    The aim of the analysis was to determine whether demand in Germany for antibiotics is driven by prices that drop considerably when generic substitutes become available. A time-series approach was therefore carried out to explore price elasticities of demand for two different classes of broad-spectrum antimicrobials (fluoroquinolones and cephalosporins) using data on ambulatory antibiotics prescribed on the German statutory health insurance scheme and data on in-hospital antibiotic use in a Ge...

  4. Rice RING protein OSBBI1 with E3 ligase activity confers broad-spectrum resistance against Magnaporthe oryzae by modifying the cell wall defence

    Institute of Scientific and Technical Information of China (English)

    Wei Li; Zuhua He; Sihui Zhong; Guojun Li; Qun Li; Bizeng Mao; Yiwen Deng; Huijuan Zhang; Longjun Zeng; Fengming Song

    2011-01-01

    Emerging evidence suggests that E3 ligases play critical roles in diverse biological processes, including innate immune responses in plants. However, the mechanism of the E3 ligase involvement in plant innate immunity is unclear.We report that a rice gene, OsBBI1, encoding a RING finger protein with E3 ligase activity, mediates broad-spectrum disease resistance. The expression of OSBBI1 was induced by rice blast fungus Magnaporthe oryzae, as well as chemical inducers, benzothiadiazole and salicylic acid. Biochemical analysis revealed that OsBBI1 protein possesses E3ubiquitin ligase activity in vitro. Genetic analysis revealed that the loss of OsBBI1 function in a Tos17-insertion line increased susceptibility, while the overexpression of OsBBI1 in transgenic plants conferred enhanced resistance to multiple races of M.oryzae. This indicates that OsBBI1 modulates broad-spectrum resistance against the blast fungus. The OsBBII-overexpressing plants showed higher levels of H,O, accumulation in cells and higher levels of phenolic compounds and cross-linking of proteins in cell walls at infection sites by M. Oryzae compared with wild-type(WT)plants. The cell walls were thicker in the OsBB11-overexpressing plants and thinner in the mutant plants than in the WT plants. Our results suggest that OsBBH modulates broad-spectrum resistance to blast fungus by modifying cell wall defence responses. The functional characterization of OsBBI1 provides insight into the E3 ligase-mediated innate immunity, and a practical tool for constructing broad-spectrum resistance against the most destructive disease in rice.

  5. Unusual non-fluorescent broad spectrum siderophore activity (SID EGYII) by Pseudomonas aeruginosa strain EGYII DSM 101801 and a new insight towards simple siderophore bioassay.

    Science.gov (United States)

    Embaby, Amira M; Heshmat, Yasmin; Hussein, Ahmed

    2016-03-01

    Present study highlights an unusual non-fluorescent hydroxamate broad spectrum siderophore (SID EGYII) activity from Pseudomonas aeruginosa strain EGYII DSM 101801, a soil bacterial isolate, along with simple low cost effective siderophore bioassay. Detection of SID EGYII activity qualitatively was proved by masking this activity against Erwinia amylovora strain EGY1 DSM 101800, an indicator strain, in well-cut diffusion assay containing 100 µM FeCl3. SID EGYII activity was expressed quantitatively as arbitrary units [Siderophore arbitrary units (SAU)] 380 SAU/mL against E. amylovora strain EGY1 DSM 101800. Maximal SID EGYII activity was achieved upon growing P. aeruginosa strain EGYII DSM 101801 in PYB broth at 180 rpm for 24 h. SID EGYII displayed a broad spectrum antimicrobial activity against some human pathogens (i.e., Gram-positive bacteria, Gram-negative bacteria and yeasts) and a fireblight plant pathogen. Interestingly, transformants of Escherichia coli JM109 (DE3)pSID/EGYII harboring P. aeruginosa strain EGYII DSM 101801 plasmid demonstrated a perceivable antimicrobial activity against E. amylovora strain EGY1 DSM 101800. The broad spectrum antimicrobial activity of the unusual non-fluorescent SID EGYII would underpin its high potential in targeting bacterial pathogens posing probable threats to human health and agricultural economy. The present simple low cost effective bioassay is a new insight towards an alternative to the expensive cumbersome siderophore Chrome Azurol S assay. PMID:27015845

  6. Targeting N-Glycan Cryptic Sugar Moieties for Broad-Spectrum Virus Neutralization: Progress in Identifying Conserved Molecular Targets in Viruses of Distinct Phylogenetic Origins

    Directory of Open Access Journals (Sweden)

    Denong Wang

    2015-03-01

    Full Text Available Identifying molecular targets for eliciting broadly virus-neutralizing antibodies is one of the key steps toward development of vaccines against emerging viral pathogens. Owing to genomic and somatic diversities among viral species, identifying protein targets for broad-spectrum virus neutralization is highly challenging even for the same virus, such as HIV-1. However, viruses rely on host glycosylation machineries to synthesize and express glycans and, thereby, may display common carbohydrate moieties. Thus, exploring glycan-binding profiles of broad-spectrum virus-neutralizing agents may provide key information to uncover the carbohydrate-based virus-neutralizing epitopes. In this study, we characterized two broadly HIV-neutralizing agents, human monoclonal antibody 2G12 and Galanthus nivalis lectin (GNA, for their viral targeting activities. Although these agents were known to be specific for oligomannosyl antigens, they differ strikingly in virus-binding activities. The former is HIV-1 specific; the latter is broadly reactive and is able to neutralize viruses of distinct phylogenetic origins, such as HIV-1, severe acute respiratory syndrome coronavirus (SARS-CoV, and human cytomegalovirus (HCMV. In carbohydrate microarray analyses, we explored the molecular basis underlying the striking differences in the spectrum of anti-virus activities of the two probes. Unlike 2G12, which is strictly specific for the high-density Man9GlcNAc2Asn (Man9-clusters, GNA recognizes a number of N-glycan cryptic sugar moieties. These include not only the known oligomannosyl antigens but also previously unrecognized tri-antennary or multi-valent GlcNAc-terminating N-glycan epitopes (Tri/m-Gn. These findings highlight the potential of N-glycan cryptic sugar moieties as conserved targets for broad-spectrum virus neutralization and suggest the GNA-model of glycan-binding warrants focused investigation.

  7. Ceftriaxone-sulbactam combination in rabbit endocarditis caused by a strain of Klebsiella pneumoniae producing extended-broad-spectrum TEM-3 beta-lactamase.

    OpenAIRE

    Caron, F.; Gutmann, L; Bure, A; B. Pangon; Vallois, J M; Pechinot, A; Carbon, C

    1990-01-01

    We studied the activity of the combination of sulbactam and ceftriaxone against a Klebsiella pneumoniae strain producing TEM-3, a new extended-broad-spectrum beta-lactamase, in an endocarditis model. In vitro, ceftriaxone was strongly inactivated in the presence of TEM-3 (MBC, 128 micrograms/ml with an inoculum of 5 x 10(5) CFU/ml). A marked inoculum effect was demonstrated with sulbactam: effective concentrations of inhibitor needed to reduce the MIC and MBC of ceftriaxone to similar levels ...

  8. Metabolism of the broad-spectrum neuropeptide growth factor antagonist: [D-Arg1, D-Phe5, D-Trp7,9, Leu11]-substance P.

    OpenAIRE

    Jones, D. A.; Cummings, J.; Langdon, S. P.; Maclellan, A. J.; Higgins, T; Rozengurt, E; Smyth, J. F.

    1996-01-01

    Broad-spectrum neuropeptide growth factor antagonists, such as [D-Arg1, D-Phe5, D-Trp7,9, Leu11]substance P (antagonist D) and [Arg6, D-Trp7,9, NmePhe8]substance P(6-11) (antagonist G), are currently being investigated as possible anti-tumour agents. These compounds are hoped to be effective against neuropeptide-driven cancers such as small-cell lung cancer. Antagonist D possesses a broader antagonistic spectrum than antagonist G and hence may be of greater therapeutic use. The in vitro metab...

  9. The broad-spectrum antiviral compound ST-669 restricts chlamydial inclusion development and bacterial growth and localizes to host cell lipid droplets within treated cells.

    Science.gov (United States)

    Sandoz, Kelsi M; Valiant, William G; Eriksen, Steven G; Hruby, Dennis E; Allen, Robert D; Rockey, Daniel D

    2014-07-01

    Novel broad-spectrum antimicrobials are a critical component of a strategy for combating antibiotic-resistant pathogens. In this study, we explored the activity of the broad-spectrum antiviral compound ST-669 for activity against different intracellular bacteria and began a characterization of its mechanism of antimicrobial action. ST-669 inhibits the growth of three different species of chlamydia and the intracellular bacterium Coxiella burnetii in Vero and HeLa cells but not in McCoy (murine) cells. The antichlamydial and anti-C. burnetii activity spectrum was consistent with those observed for tested viruses, suggesting a common mechanism of action. Cycloheximide treatment in the presence of ST-669 abrogated the inhibitory effect, demonstrating that eukaryotic protein synthesis is required for tested activity. Immunofluorescence microscopy demonstrated that different chlamydiae grow atypically in the presence of ST-669, in a manner that suggests the compound affects inclusion formation and organization. Microscopic analysis of cells treated with a fluorescent derivative of ST-669 demonstrated that the compound localized to host cell lipid droplets but not to other organelles or the host cytosol. These results demonstrate that ST-669 affects intracellular growth in a host-cell-dependent manner and interrupts proper development of chlamydial inclusions, possibly through a lipid droplet-dependent process. PMID:24777097

  10. Ceftriaxone-sulbactam combination in rabbit endocarditis caused by a strain of Klebsiella pneumoniae producing extended-broad-spectrum TEM-3 beta-lactamase.

    Science.gov (United States)

    Caron, F; Gutmann, L; Bure, A; Pangon, B; Vallois, J M; Pechinot, A; Carbon, C

    1990-11-01

    We studied the activity of the combination of sulbactam and ceftriaxone against a Klebsiella pneumoniae strain producing TEM-3, a new extended-broad-spectrum beta-lactamase, in an endocarditis model. In vitro, ceftriaxone was strongly inactivated in the presence of TEM-3 (MBC, 128 micrograms/ml with an inoculum of 5 x 10(5) CFU/ml). A marked inoculum effect was demonstrated with sulbactam: effective concentrations of inhibitor needed to reduce the MIC and MBC of ceftriaxone to similar levels increased from 1 microgram/ml in the presence of an inoculum of 5 x 10(5) CFU/ml to 20 micrograms/ml in the presence of an inoculum of 1 x 10(7) CFU/ml. In vivo, sulbactam given at 200 mg/kg of body weight every 12 h, a dosage higher than that previously reported to be effective against rabbit endocarditis caused by other microorganisms, was not sufficient to restore the complete activity of ceftriaxone given at 30 mg/kg once daily for 4 days. This insufficient activity may be correlated with the presence of a high level of beta-lactamase inside the vegetations, as indicated by a quantitative in vitro assay of beta-lactamase activity in the cardiac vegetation, suggesting an insufficient inactivation of the extended-broad-spectrum beta-lactamase in vivo. PMID:2073099

  11. 网格蛋白介导型内吞作用与广谱抗病毒药%Clathrin-mediated endocytosis and broad-spectrum antivirals

    Institute of Scientific and Technical Information of China (English)

    周丽; 杨晓虹; 徐利保; 肖军海

    2013-01-01

    Viral disease is a serious threat for human health. Alhough plenty of antiviral agents have been used in clinical treatment, many viruses are resistant to them via virus mutation. And novel harmful viruses emerge in endlessly. So research and development of new antiviral drugs, especially the agents that are of broad-spectrum antiviral activity is particularly important. Clathrin-mediated endocytosis is the most common pathway used by viruses and pathogens for entering host cells. The inhibitors of clathrin-me-diated endocytosis may block the entry of viruses and pathogens, thus prevent viral infection. For the inhibitors do not directly act on the virus itself, it is hard to induce virus mutations which produce drug resistance. Clathrin-mediated endocytosis is the potential target of broad-spectrum antiviral agents in recent years. This review focuses on the mechanism of virus entry through clathrin-mediated endocytosis, the recent advances of clathrin-mediated endocytosis inhibitors and their potential applications in broad-spectrum antiviral therapeutics field.%病毒性疾病对人类的健康造成了巨大的威胁,虽然有很多药物用于临床治疗,但由于病毒的易变异性,对现有的抗病毒药物极易产生耐药性,而新发病毒又层出不穷,因此研发新的抗病毒药物尤其是广谱且不易产生耐药的抗病毒药物对于病毒性疾病的治疗就显得尤为重要.网格蛋白介导型内吞是许多病毒和病原体进入宿主细胞的主要途径,抑制此途径可阻断病毒进入宿主细胞,从而抑制病毒感染,由于其功能和机制与病毒自身无关,不易产生耐药,是近年来广谱抗病毒药物的潜在作用靶标.本文结合国内外最新研究报道,简要综述了病毒依赖网格蛋白介导型内吞入胞的机制,网格蛋白介导型内吞抑制剂的研究现状,及其在广谱抗病毒药物研发中的潜在应用前景.

  12. The broad-spectrum metalloproteinase inhibitor BB-94 inhibits growth, HER3 and Erk activation in fulvestrant-resistant breast cancer cell lines

    DEFF Research Database (Denmark)

    Kirkegaard, Tove; Yde, Christina Westmose; Kveiborg, Marie; Lykkesfeldt, Anne E

    2014-01-01

    consequently increased cell growth. In this study, we investigated the importance of HER receptors, in particular HER3, and HER ligand shedding for growth and signaling in human MCF-7 breast cancer cells and MCF-7-derived sublines resistant to the antiestrogen fulvestrant. The HER3/HER4 ligand heregulin 1β...... induced phosphorylation of HER3, Akt and Erk, and partly rescued fulvestrant-inhibited growth of MCF-7 cells. HER3 ligands were found to be produced and shed from the fulvestrant-resistant cells as conditioned medium from fulvestrant-resistant MCF-7 cells induced phosphorylation of HER3 and Akt in MCF-7...... cells. This was prevented by treatment of resistant cells with the metalloproteinase inhibitor TAPI-2. Only the broad-spectrum metalloproteinase inhibitor BB-94, and not the more selective inhibitors GM6001 or TAPI-2, which inhibited shedding of the HER ligands produced by the fulvestrant...

  13. Facile synthesis of Fe3O4 nanoparticles decorated on 3D graphene aerogels as broad-spectrum sorbents for water treatment

    Science.gov (United States)

    Li, Yong; Zhang, Ruofang; Tian, Xike; Yang, Chao; Zhou, Zhaoxin

    2016-04-01

    In order to develop efficient and environment benign sorbents for water purification, the macroscopic multifunctional magnetite-reduced graphene oxides aerogels (M-RGOs) with strong interconnected networks were prepared via a one pot solvothermal method of graphene oxide sheets adsorbing iron ions and in situ simultaneous deposition of Fe3O4 nanoparticles in ethylene glycol or triethylene glycol solvents. Such M-RGOs exhibited excellent sorption capacity to different contaminants, including oils, organic solvents, arsenite ions, as well as dyes. In addition, it was demonstrated that the M-RGOs could be used as column packing materials to manufacture column for water purification by filtration. The method proposed was proved to be versatile to induce synergistic assembly of RGO sheets with other functional metal oxides nanoparticles and as a kind of broad-spectrum sorbents for removing different types of contaminants in water purification, simultaneously.

  14. Validação dos sistemas de alerta Machardy e Colpam 40® para previsão da requeima do tomateiro em Caçador, SC Validation of the warning systems MacHardy and Colpam 40® to forecast late blight in tomato from Caçador municipality, Santa Catarina state (SC Brazil

    Directory of Open Access Journals (Sweden)

    Walter Ferreira Becker

    2010-09-01

    Full Text Available Foram validados dois sistemas de alerta na requeima do tomateiro, no município de Caçador-SC em dois ciclos de cultivo. No primeiro ciclo, os métodos de MacHardy modificado e Colpam 40®, este com valor de severidade acumulado da doença (VS igual a 10, como alerta para a pulverização de fungicidas de contato e comparados ao sistema convencional de calendário no híbrido Carmen e na cultivar Santa Clara. Em relação ao convencional, a indicação de pulverizações pelos sistemas de alerta permitiu uma redução na aplicação de fungicidas de 33,3% e 48,1%, pelos métodos de MacHardy modificado e Colpam 40®, respectivamente. A produtividade foi maior no híbrido Carmen do que na cv. S. Clara, mas em cada um destes materiais não houve diferença entre os sistemas de alerta e o convencional. Na cv. Carmen não houve diferença no controle da requeima na comparação do sistema convencional com o Colpam 40®. No segundo ciclo, usou-se o híbrido Carmen e os sistemas de alerta McHardy e Colpam 40 ® este com VS igual a 8 e 10 comparando-os ao sistema convencional. Não houve diferença na produtividade entre os tratamentos. Em relação ao número de pulverizações houve redução de 42,8% e 60,7% para VS igual a 8 e 10, respectivamente, com o sistema de alerta do Colpam 40® e de 39,2% com o de McHardy. Na avaliação da requeima, não houve diferença entre os tratamentos, exceto para o maior VS de alerta monitorado segundo o Colpam 40® cuja intensidade da doença foi maior. Este trabalho demonstrou que o uso destes dois sistemas de alerta da requeima, MacHardy e Colpam 40, poderiam ser ferramentas úteis para os produtores de tomate na tomada de decisão da pulverização em tomate na região de Caçador, SC.Two warning systems for late blight in tomato were evaluated in two growing seasons in Caçador Municipality, Santa Catarina State (SC, Brazil. In the first growing season, as warming for fungicide spraying in late blight control

  15. Deletion and Complementation of the Mating Type (MAT) Locus of the Wheat Head Blight Pathogen Gibberella zeae

    OpenAIRE

    Desjardins, A E; Brown, D W; Yun, S.-H.; Proctor, R.H.; Lee, T.; Plattner, R. D.; Lu, S.-W.; Turgeon, B G

    2004-01-01

    Gibberella zeae, a self-fertile, haploid filamentous ascomycete, causes serious epidemics of wheat (Triticum aestivum) head blight worldwide and contaminates grain with trichothecene mycotoxins. Anecdotal evidence dating back to the late 19th century indicates that G. zeae ascospores (sexual spores) are a more important inoculum source than are macroconidia (asexual spores), although the fungus can produce both during wheat head blight epidemics. To develop fungal strains to test this hypothe...

  16. Transgenic rice with inducible ethylene production exhibits broad-spectrum disease resistance to the fungal pathogens Magnaporthe oryzae and Rhizoctonia solani.

    Science.gov (United States)

    Helliwell, Emily E; Wang, Qin; Yang, Yinong

    2013-01-01

    Rice blast (Magnaporthe oryzae) and sheath blight (Rhizoctonia solani) are the two most devastating diseases of rice (Oryza sativa), and have severe impacts on crop yield and grain quality. Recent evidence suggests that ethylene (ET) may play a more prominent role than salicylic acid and jasmonic acid in mediating rice disease resistance. In this study, we attempt to genetically manipulate endogenous ET levels in rice for enhancing resistance to rice blast and sheath blight diseases. Transgenic lines with inducible production of ET were generated by expressing the rice ACS2 (1-aminocyclopropane-1-carboxylic acid synthase, a key enzyme of ET biosynthesis) transgene under control of a strong pathogen-inducible promoter. In comparison with the wild-type plant, the OsACS2-overexpression lines showed significantly increased levels of the OsACS2 transcripts, endogenous ET and defence gene expression, especially in response to pathogen infection. More importantly, the transgenic lines exhibited increased resistance to a field isolate of R. solani, as well as different races of M. oryzae. Assessment of the growth rate, generational time and seed production revealed little or no differences between wild type and transgenic lines. These results suggest that pathogen-inducible production of ET in transgenic rice can enhance resistance to necrotrophic and hemibiotrophic fungal pathogens without negatively impacting crop productivity. PMID:23031077

  17. Protease-sensitive conformers in broad spectrum of distinct PrPSc structures in sporadic Creutzfeldt-Jakob disease are indicator of progression rate.

    Directory of Open Access Journals (Sweden)

    Chae Kim

    2011-09-01

    Full Text Available The origin, range, and structure of prions causing the most common human prion disease, sporadic Creutzfeldt-Jakob disease (sCJD, are largely unknown. To investigate the molecular mechanism responsible for the broad phenotypic variability of sCJD, we analyzed the conformational characteristics of protease-sensitive and protease-resistant fractions of the pathogenic prion protein (PrP(Sc using novel conformational methods derived from a conformation-dependent immunoassay (CDI. In 46 brains of patients homozygous for polymorphisms in the PRNP gene and exhibiting either Type 1 or Type 2 western blot pattern of the PrP(Sc, we identified an extensive array of PrP(Sc structures that differ in protease sensitivity, display of critical domains, and conformational stability. Surprisingly, in sCJD cases homozygous for methionine or valine at codon 129 of the PRNP gene, the concentration and stability of protease-sensitive conformers of PrP(Sc correlated with progression rate of the disease. These data indicate that sCJD brains exhibit a wide spectrum of PrP(Sc structural states, and accordingly argue for a broad spectrum of prion strains coding for different phenotypes. The link between disease duration, levels, and stability of protease-sensitive conformers of PrP(Sc suggests that these conformers play an important role in the pathogenesis of sCJD.

  18. The effect of heating temperature and nitric acid treatments on the performance of Cu- and Zn-based broad spectrum respirator carbons.

    Science.gov (United States)

    Smith, J W H; Romero, J V; Dahn, T R; Dunphy, K; Sullivan, B; Mallay, M; Croll, L M; Reynolds, J H; Andress, C; Dahn, J R

    2011-12-01

    Impregnated activated carbons (IACs) that are used in broad spectrum gas mask applications have historically contained copper and/or zinc impregnants. The addition of an oxidizing agent, such as nitric acid (HNO(3)) can be useful in distributing the metallic impregnants uniformly on the activated carbon substrate. In this work, we study IACs prepared from copper nitrate (Cu(NO(3))(2)) and zinc nitrate (Zn(NO(3))(2)) precursors as a function of HNO(3) content present in the impregnating solution and as a function of heating temperature. The gas adsorption capacity of the IACs was determined by dynamic flow testing using sulfur dioxide (SO(2)), ammonia (NH(3)), hydrogen cyanide (HCN) and cyclohexane (C(6)H(12)) challenge gases under dry and humid conditions. The thermal decomposition and distribution of the impregnant on the activated carbon substrate is studied using X-ray diffraction (XRD), scanning electron microscopy (SEM) and thermal analysis techniques. Relationships between gas adsorption capacity, impregnant distribution and the species of surface impregnants are discussed. PMID:21911221

  19. Tallow amphopolycarboxyglycinate-stabilized silver nanoparticles: new frontiers in development of plant protection products with a broad spectrum of action against phytopathogens

    Science.gov (United States)

    Krutyakov, Yurii A.; Kudrinskiy, Alexey A.; Zherebin, Pavel M.; Yapryntsev, Alexey D.; Pobedinskaya, Marina A.; Elansky, Sergey N.; Denisov, Albert N.; Mikhaylov, Dmitry M.; Lisichkin, Georgii V.

    2016-07-01

    Sustainable agriculture calls for minimal use of agrochemicals in order to protect the environment. It has caused an increase in the rate of nanoparticles use, in particular silver nanoparticles (AgNPs) due to their safety for mammals, unique biological activity and a broad spectrum of action against fungal and bacterial pathogens. Until now the use of AgNPs dispersions in the agricultural sector has been essentially limited due to many factors decreased their stability (mixing with other pesticides, presence of electrolytes). We present a versatile synthesis of polyampholyte surfactant (tallow amphopolycarboxyglycinate) stabilized AgNPs. We took a close look at unique aggregation behavior (via dynamic light scattering and UV–vis spectroscopy) and biocidal activity of obtained silver colloids. AgNPs are characterized by exclusively high aggregative stability in the presence of coagulating agents NaNO3 and NaSO4 (up to 1 M), during drying/redispergation, and frost/defrost cycles. The dispersion of AgNPs shows high biocidal activity (EC50 is ten times lower than commercial species ones) with respect to Phytophthora infestans and phytopathogenic fungi. This points to the possibility of successful application of silver preparations within agriculture with the goal of partial reduction of the use of toxic and expensive synthetic antibiotics and pesticides.

  20. Stepwise design, synthesis, and in vitro antifungal screening of (Z)-substituted-propenoic acid derivatives with potent broad-spectrum antifungal activity

    Science.gov (United States)

    Khedr, Mohammed A

    2015-01-01

    Fungal infections are a main reason for the high mortality rate worldwide. It is a challenge to design selective antifungal agents with broad-spectrum activity. Lanosterol 14α-demethylase is an attractive target in the design of antifungal agents. Seven compounds were selected from a number of designed compounds using a rational docking study. These compounds were synthesized and evaluated for their antifungal activity. In silico study results showed the high binding affinity to lanosterol 14α-demethylase (−24.49 and −25.83 kcal/mol) for compounds V and VII, respectively; these values were greater than those for miconazole (−18.19 kcal/mol) and fluconazole (−16.08 kcal/mol). Compound V emerged as the most potent antifungal agent among all compounds with a half maximal inhibitory concentration of 7.01, 7.59, 7.25, 31.6, and 41.6 µg/mL against Candida albicans, Candida parapsilosis, Aspergillus niger, Trichophyton rubrum, and Trichophyton mentagrophytes, respectively. The antifungal activity for most of the synthesized compounds was more potent than that of miconazole and fluconazole. PMID:26309398

  1. Naturally occurring broad-spectrum powdery mildew resistance in a Central American tomato accession is caused by loss of mlo function.

    Science.gov (United States)

    Bai, Yuling; Pavan, Stefano; Zheng, Zheng; Zappel, Nana F; Reinstädler, Anja; Lotti, Concetta; De Giovanni, Claudio; Ricciardi, Luigi; Lindhout, Pim; Visser, Richard; Theres, Klaus; Panstruga, Ralph

    2008-01-01

    The resistant cherry tomato (Solanum lycopersicum var. cerasiforme) line LC-95, derived from an accession collected in Ecuador, harbors a natural allele (ol-2) that confers broad-spectrum and recessively inherited resistance to powdery mildew (Oidium neolycopersici). As both the genetic and phytopathological characteristics of ol-2-mediated resistance are reminiscent of powdery mildew immunity conferred by loss-of-function mlo alleles in barley and Arabidopsis, we initiated a candidate-gene approach to clone Ol-2. A tomato Mlo gene (SlMlo1) with high sequence-relatedness to barley Mlo and Arabidopsis AtMLO2 mapped to the chromosomal region harboring the Ol-2 locus. Complementation experiments using transgenic tomato lines as well as virus-induced gene silencing assays suggested that loss of SlMlo1 function is responsible for powdery mildew resistance conferred by ol-2. In progeny of a cross between a resistant line bearing ol-2 and the susceptible tomato cultivar Moneymaker, a 19-bp deletion disrupting the SlMlo1 coding region cosegregated with resistance. This polymorphism results in a frameshift and, thus, a truncated nonfunctional SlMlo1 protein. Our findings reveal the second example of a natural mlo mutant that possibly arose post-domestication, suggesting that natural mlo alleles might be evolutionarily short-lived due to fitness costs related to loss of mlo function. PMID:18052880

  2. Sunscreens with broad-spectrum absorption decrease the trans TO cis photoisomerization of urocanic acid in the human stratum corneum after multiple UV light exposures

    International Nuclear Information System (INIS)

    The trans to cis photoisomerization of urocanic acid (UCA) in skin is considered to play an important role in the mechanism of immunosuppression. We have investigated the effects of skin type and various sunscreens with low sun protection factor (SPF) on the UV-induced cis-UCA formation in human skin after exposure to artificial UV light. The rate of cis-UCA formation depends little on the skin type and is reduced by topical application of sunscreens. The rate of cis-UCA formation decreases with increasing SPF and only broad-spectrum, highly protective sunscreens offer protection against the UV-induced formation of cis-UCA, which accumulates in the stratum corneum after multiple UV exposures. A theoretical approach to estimate the distribution of cis-UCA after irradiation indicates that this compound may diffuse into the deeper layers of the epidermis with D ∼ 10-17 m2/s, and that its elimination from the stratum corneum is mainly due to desquamation. (author)

  3. Targeting highly conserved 3'-untranslated region of pecluviruses for sensitive broad-spectrum detection and quantitation by RT-PCR and assessment of phylogenetic relationships.

    Science.gov (United States)

    Dieryck, B; Delfosse, P; Reddy, A S; Bragard, C

    2010-11-01

    The 3'-end region of many virus isolates has been shown to possess conserved sequences in addition to the presence of numerous genomic and subgenomic RNAs. Utilizing these sequences, a broad-spectrum reverse transcription-polymerase chain reaction protocol has been developed to detect all the known Indian peanut clump virus and Peanut clump virus isolates, that cause peanut clump diseases in West Africa and India. The primers were targeted at the highly conserved 3'-untranslated regions of the PCV RNA-1 and RNA-2. The conservation was confirmed by sequencing these untranslated regions of RNA-1 for six isolates and RNA-2 for one isolate. The conserved structure of the RNA-1 and RNA-2 was observed and the importance of this region for the virus survival was confirmed. The primers were also designed for virus quantitation using a Taqman(®)-based real-time RT-PCR. The use of RT-PCR and real-time quantitative RT-PCR improved the sensitivity of PCV detection compared to ELISA. RT-PCR also led to the detection of IPCV and PCV on two new natural hosts: Oldenlandia aspera and Vigna subterranea. Real-time RT-PCR is considered to be an ideal tool for identifying resistant sources to both IPCV and PCV. PMID:20723565

  4. Albendazole, a broad-spectrum anthelmintic, in the treatment of intestinal nematode and cestode infection: a multicenter study in 480 patients.

    Science.gov (United States)

    Jagota, S C

    1986-01-01

    The anthelmintic activity of and patient tolerance to albendazole, a broad-spectrum anthelmintic, were studied in a multicenter trial involving 480 patients ranging in age from 2 to 60 years. The patients had single or mixed infections caused by pinworms, roundworms, hookworms, whipworms, threadworms, or tapeworms. The stools were examined by the direct method, and ova were counted by means of the Kato-Katz technique. A Graham-Scotch test was also done in patients infected with Enterobius vermicularis. Most patients received a single 400-mg dose of albendazole; adults were given two tablets, and children were given a 2% suspension. All patients with Hymenolepis nana and about half of those with Taenia infections were treated for three successive days. Patients were carefully evaluated before and after treatment to assess the efficacy and safety of the drug. After a single dose of albendazole, the cure rate was 95.3% in ascariasis, 92.2% in ancylostomiasis, 90.5% in trichuriasis, 64.9% in taeniasis, and 100% in enterobiasis. Among patients receiving 400 mg of albendazole for three days, the cure rate was 63.4% in hymenolepiasis and 86.1% in taeniasis. The drug was well tolerated, and no significant side effects were reported. PMID:3516398

  5. Varespladib (LY315920) Appears to Be a Potent, Broad-Spectrum, Inhibitor of Snake Venom Phospholipase A2 and a Possible Pre-Referral Treatment for Envenomation.

    Science.gov (United States)

    Lewin, Matthew; Samuel, Stephen; Merkel, Janie; Bickler, Philip

    2016-01-01

    Snakebite remains a neglected medical problem of the developing world with up to 125,000 deaths each year despite more than a century of calls to improve snakebite prevention and care. An estimated 75% of fatalities from snakebite occur outside the hospital setting. Because phospholipase A2 (PLA2) activity is an important component of venom toxicity, we sought candidate PLA2 inhibitors by directly testing drugs. Surprisingly, varespladib and its orally bioavailable prodrug, methyl-varespladib showed high-level secretory PLA2 (sPLA2) inhibition at nanomolar and picomolar concentrations against 28 medically important snake venoms from six continents. In vivo proof-of-concept studies with varespladib had striking survival benefit against lethal doses of Micrurus fulvius and Vipera berus venom, and suppressed venom-induced sPLA2 activity in rats challenged with 100% lethal doses of M. fulvius venom. Rapid development and deployment of a broad-spectrum PLA2 inhibitor alone or in combination with other small molecule inhibitors of snake toxins (e.g., metalloproteases) could fill the critical therapeutic gap spanning pre-referral and hospital setting. Lower barriers for clinical testing of safety tested, repurposed small molecule therapeutics are a potentially economical and effective path forward to fill the pre-referral gap in the setting of snakebite. PMID:27571102

  6. Nuclear Magnetic Resonance Solution Structures of Lacticin Q and Aureocin A53 Reveal a Structural Motif Conserved among Leaderless Bacteriocins with Broad-Spectrum Activity.

    Science.gov (United States)

    Acedo, Jeella Z; van Belkum, Marco J; Lohans, Christopher T; Towle, Kaitlyn M; Miskolzie, Mark; Vederas, John C

    2016-02-01

    Lacticin Q (LnqQ) and aureocin A53 (AucA) are leaderless bacteriocins from Lactococcus lactis QU5 and Staphylococcus aureus A53, respectively. These bacteriocins are characterized by the absence of an N-terminal leader sequence and are active against a broad range of Gram-positive bacteria. LnqQ and AucA consist of 53 and 51 amino acids, respectively, and have 47% identical sequences. In this study, their three-dimensional structures were elucidated using solution nuclear magnetic resonance and were shown to consist of four α-helices that assume a very similar compact, globular overall fold (root-mean-square deviation of 1.7 Å) with a highly cationic surface and a hydrophobic core. The structures of LnqQ and AucA resemble the shorter two-component leaderless bacteriocins, enterocins 7A and 7B, despite having low levels of sequence identity. Homology modeling revealed that the observed structural motif may be shared among leaderless bacteriocins with broad-spectrum activity against Gram-positive organisms. The elucidated structures of LnqQ and AucA also exhibit some resemblance to circular bacteriocins. Despite their similar overall fold, inhibition studies showed that LnqQ and AucA have different antimicrobial potency against the Gram-positive strains tested, suggesting that sequence disparities play a crucial role in their mechanisms of action. PMID:26771761

  7. Varespladib (LY315920 Appears to Be a Potent, Broad-Spectrum, Inhibitor of Snake Venom Phospholipase A2 and a Possible Pre-Referral Treatment for Envenomation

    Directory of Open Access Journals (Sweden)

    Matthew Lewin

    2016-08-01

    Full Text Available Snakebite remains a neglected medical problem of the developing world with up to 125,000 deaths each year despite more than a century of calls to improve snakebite prevention and care. An estimated 75% of fatalities from snakebite occur outside the hospital setting. Because phospholipase A2 (PLA2 activity is an important component of venom toxicity, we sought candidate PLA2 inhibitors by directly testing drugs. Surprisingly, varespladib and its orally bioavailable prodrug, methyl-varespladib showed high-level secretory PLA2 (sPLA2 inhibition at nanomolar and picomolar concentrations against 28 medically important snake venoms from six continents. In vivo proof-of-concept studies with varespladib had striking survival benefit against lethal doses of Micrurus fulvius and Vipera berus venom, and suppressed venom-induced sPLA2 activity in rats challenged with 100% lethal doses of M. fulvius venom. Rapid development and deployment of a broad-spectrum PLA2 inhibitor alone or in combination with other small molecule inhibitors of snake toxins (e.g., metalloproteases could fill the critical therapeutic gap spanning pre-referral and hospital setting. Lower barriers for clinical testing of safety tested, repurposed small molecule therapeutics are a potentially economical and effective path forward to fill the pre-referral gap in the setting of snakebite.

  8. HISTOLOGY AND PHYSIOLOGY OF FUSARIUM HEAD BLIGHT

    Science.gov (United States)

    Fusarium head blight re-emerged as a devastating disease of wheat and barley in the 1990s in the midwestern U.S. Research efforts to control the disease have been hampered by limited knowledge of how the fungal head blight pathogens infect and damage head tissue and what natural defenses the plant h...

  9. Development of a monoclonal antibody specific to envelope domain III with broad-spectrum detection of all four dengue virus serotypes.

    Science.gov (United States)

    Kim, Sae-Hae; Kim, Yu Na; Truong, Thang Thua; Thu Thuy, Nguyen Thi; Mai, Le Quynh; Jang, Yong-Suk

    2016-05-13

    Dengue virus (DENV) is a mosquito-borne pathogen that annually infects more than 390 million people in 100 different countries. Symptoms of the viral infection include a relatively weak dengue fever to severe dengue hemorrhagic fever/dengue shock syndrome, which are mortal infectious diseases. As of yet, there is no commercially available vaccine or therapeutic for DENV. Currently, passive immunotherapy using DENV-specific antibody (Ab) is a considered strategy to treat DENV infection. Here, we developed a monoclonal Ab (mAb), EDIIImAb-61, specific to the DENV domain III of the envelope glycoprotein (EDIII) with broad-spectrum detection ability to all four DENV serotypes (DENV-1∼4) to use as a therapeutic Ab. Although EDIII contains non-immunodominant epitopes compared to domains I and II, domain III plays a critical role in host receptor binding. EDIIImAb-61 exhibited cross-reactive binding affinity to all four DENV serotypes that had been isolated from infected humans. To further characterize EDIIImAb-61 and prepare genes for large-scale production using a heterologous expression system, the sequence of the complementarity determining regions was analyzed after cloning the full-length cDNA genes encoding the heavy and light chain of the mAb. Finally, we produced Ab from CHO-K1 cells transfected with the cloned EDIIImAb-61 heavy and light chain genes and confirmed the binding ability of the Ab. Collectively, we conclude that EDIIImAb-61 itself and the recombinant Ab produced using the cloned heavy and light chain gene of EDIIImAb-61 is a candidate for passive immunotherapy against DENV infection. PMID:27059141

  10. Transplastomic Nicotiana benthamiana plants expressing multiple defence genes encoding protease inhibitors and chitinase display broad-spectrum resistance against insects, pathogens and abiotic stresses.

    Science.gov (United States)

    Chen, Peng-Jen; Senthilkumar, Rajendran; Jane, Wann-Neng; He, Yong; Tian, Zhihong; Yeh, Kai-Wun

    2014-05-01

    Plastid engineering provides several advantages for the next generation of transgenic technology, including the convenient use of transgene stacking and the generation of high expression levels of foreign proteins. With the goal of generating transplastomic plants with multiresistance against both phytopathogens and insects, a construct containing a monocistronic patterned gene stack was transformed into Nicotiana benthamiana plastids harbouring sweet potato sporamin, taro cystatin and chitinase from Paecilomyces javanicus. Transplastomic lines were screened and characterized by Southern/Northern/Western blot analysis for the confirmation of transgene integration and respective expression level. Immunogold localization analyses confirmed the high level of accumulation proteins that were specifically expressed in leaf and root plastids. Subsequent functional bioassays confirmed that the gene stacks conferred a high level of resistance against both insects and phytopathogens. Specifically, larva of Spodoptera litura and Spodoptera exigua either died or exhibited growth retardation after ingesting transplastomic plant leaves. In addition, the inhibitory effects on both leaf spot diseases caused by Alternaria alternata and soft rot disease caused by Pectobacterium carotovorum subsp. carotovorum were markedly observed. Moreover, tolerance to abiotic stresses such as salt/osmotic stress was highly enhanced. The results confirmed that the simultaneous expression of sporamin, cystatin and chitinase conferred a broad spectrum of resistance. Conversely, the expression of single transgenes was not capable of conferring such resistance. To the best of our knowledge, this is the first study to demonstrate an efficacious stacked combination of plastid-expressed defence genes which resulted in an engineered tolerance to various abiotic and biotic stresses. PMID:24479648

  11. Characterization of Disopyramide derivative ADD424042 as a non-cardiotoxic neuronal sodium channel blocker with broad-spectrum anticonvulsant activity in rodent seizure models.

    Science.gov (United States)

    Król, Marek; Ufnal, Marcin; Szulczyk, Bartłomiej; Podsadni, Piotr; Drapała, Adrian; Turło, Jadwiga; Dawidowski, Maciej

    2016-01-01

    It was reported that antiarrhythmic drugs (AADs) can be useful in controlling refractory seizures in humans or in enhancing the action of antiepileptic drugs (AEDs) in animal models. Disopyramide phosphate (DISO) is an AAD that blocks sodium channels in cardiac myocytes. We evaluated a DISO derivative, 2-(2-chlorophenyl)-2-(pyridin-2-yl)acetamide (ADD424042) for its anticonvulsant activity in a battery of rodent models of epileptic seizures. The compound displayed a broad spectrum of activity in the 'classical' models as well as in the models of pharmacoresistant seizures. Furthermore, ADD424042 showed good therapeutic indices between the anticonvulsant activity and the motor impairment. On the contrary, no anticonvulsant effects but severe lethality were observed in the primary anticonvulsant testing of the parent DISO. By performing the whole-cell voltage-clamp experiments in dispersed cortical neurons we demonstrated that ADD424042 decreased the maximal amplitude of voltage-gated sodium channels with an IC50 value in nM range. Moreover, the compound enhanced use-dependent block and decreased excitability in pyramidal neurons in the current-clamp experiments in cortical slices. Importantly, we found that ADD424042 possessed either no, or very small cardiotoxic effect. In contrast to DISO, ADD424042 did not produce any apparent changes in electrocardiogram (ECG) and arterial blood pressure recordings. ADD424042 had no effect on QT and corrected QT intervals, at a dose which was 15 times higher than ED50 for the anticonvulsant effect in the MES model. Taken together, these data suggest that ADD424042 has the potential to become a lead structure for novel broadly acting AEDs with wide margin of cardiac safety. PMID:26441377

  12. A natural component from Euphorbia humifusa Willd displays novel, broad-spectrum anti-influenza activity by blocking nuclear export of viral ribonucleoprotein.

    Science.gov (United States)

    Chang, So Young; Park, Ji Hoon; Kim, Young Ho; Kang, Jong Seong; Min, Ji-Young

    2016-03-01

    The need to develop anti-influenza drugs with novel antiviral mechanisms is urgent because of the rapid rate of antigenic mutation and the emergence of drug-resistant viruses. We identified a novel anti-influenza molecule by screening 861 plant-derived natural components using a high-throughput image-based assay that measures inhibition of the influenza virus infection. 1,3,4,6-tetra-O-galloyl-β-D-glucopyranoside (TGBG) from Euphorbia humifusa Willd showed broad-spectrum anti-influenza activity against two seasonal influenza A strains, A/California/07/2009 (H1N1) and A/Perth/16/2009 (H3N2), and seasonal influenza B strain B/Florida/04/2006. We investigated the mode of action of TGBG using neuraminidase activity inhibition and time-of-addition assays, which evaluate the viral release and entry steps, respectively. We found that TGBG exhibits a novel antiviral mechanism that differs from the FDA-approved anti-influenza drugs oseltamivir which inhibits viral release, and amantadine which inhibits viral entry. Immunofluorescence assay demonstrated that TGBG significantly inhibits nuclear export of influenza nucleoproteins (NP) during the early stages of infection causing NP to accumulate in the nucleus. In addition, influenza-induced activation of the Akt signaling pathway was suppressed by TGBG in a dose-dependent manner. These data suggest that a putative mode of action of TGBG involves inhibition of viral ribonucleoprotein (vRNP) export from the nucleus to the cytoplasm consequently disrupting the assembly of progeny virions. In summary, TGBG has potential as novel anti-influenza therapeutic with a novel mechanism of action. PMID:26850850

  13. Mycophenolic acid, an immunomodulator, has potent and broad-spectrum in vitro antiviral activity against pandemic, seasonal and avian influenza viruses affecting humans.

    Science.gov (United States)

    To, Kelvin K W; Mok, Ka-Yi; Chan, Andy S F; Cheung, Nam N; Wang, Pui; Lui, Yin-Ming; Chan, Jasper F W; Chen, Honglin; Chan, Kwok-Hung; Kao, Richard Y T; Yuen, Kwok-Yung

    2016-08-01

    Immunomodulators have been shown to improve the outcome of severe pneumonia. We have previously shown that mycophenolic acid (MPA), an immunomodulator, has antiviral activity against influenza A/WSN/1933(H1N1) using a high-throughput chemical screening assay. This study further investigated the antiviral activity and mechanism of action of MPA against contemporary clinical isolates of influenza A and B viruses. The 50 % cellular cytotoxicity (CC50) of MPA in Madin Darby canine kidney cell line was over 50 µM. MPA prevented influenza virus-induced cell death in the cell-protection assay, with significantly lower IC50 for influenza B virus B/411 than that of influenza A(H1N1)pdm09 virus H1/415 (0.208 vs 1.510 µM, P=0.0001). For H1/415, MPA interfered with the early stage of viral replication before protein synthesis. For B/411, MPA may also act at a later stage since MPA was active against B/411 even when added 12 h post-infection. Virus-yield reduction assay showed that the replication of B/411 was completely inhibited by MPA at concentrations ≥0.78 µM, while there was a dose-dependent reduction of viral titer for H1/415. The antiviral effect of MPA was completely reverted by guanosine supplementation. Plaque reduction assay showed that MPA had antiviral activity against eight different clinical isolates of A(H1N1), A(H3N2), A(H7N9) and influenza B viruses (IC50 <1 µM). In summary, MPA has broad-spectrum antiviral activity against human and avian-origin influenza viruses, in addition to its immunomodulatory activity. Together with a high chemotherapeutic index, the use of MPA as an antiviral agent should be further investigated in vivo. PMID:27259985

  14. Co-administration of the broad-spectrum antiviral, brincidofovir (CMX001), with smallpox vaccine does not compromise vaccine protection in mice challenged with ectromelia virus.

    Science.gov (United States)

    Parker, Scott; Crump, Ryan; Foster, Scott; Hartzler, Hollyce; Hembrador, Ed; Lanier, E Randall; Painter, George; Schriewer, Jill; Trost, Lawrence C; Buller, R Mark

    2014-11-01

    Natural orthopoxvirus outbreaks such as vaccinia, cowpox, cattlepox and buffalopox continue to cause morbidity in the human population. Monkeypox virus remains a significant agent of morbidity and mortality in Africa. Furthermore, monkeypox virus's broad host-range and expanding environs make it of particular concern as an emerging human pathogen. Monkeypox virus and variola virus (the etiological agent of smallpox) are both potential agents of bioterrorism. The first line response to orthopoxvirus disease is through vaccination with first-generation and second-generation vaccines, such as Dryvax and ACAM2000. Although these vaccines provide excellent protection, their widespread use is impeded by the high level of adverse events associated with vaccination using live, attenuated virus. It is possible that vaccines could be used in combination with antiviral drugs to reduce the incidence and severity of vaccine-associated adverse events, or as a preventive in individuals with uncertain exposure status or contraindication to vaccination. We have used the intranasal mousepox (ectromelia) model to evaluate the efficacy of vaccination with Dryvax or ACAM2000 in conjunction with treatment using the broad spectrum antiviral, brincidofovir (BCV, CMX001). We found that co-treatment with BCV reduced the severity of vaccination-associated lesion development. Although the immune response to vaccination was quantifiably attenuated, vaccination combined with BCV treatment did not alter the development of full protective immunity, even when administered two days following ectromelia challenge. Studies with a non-replicating vaccine, ACAM3000 (MVA), confirmed that BCV's mechanism of attenuating the immune response following vaccination with live virus was, as expected, by limiting viral replication and not through inhibition of the immune system. These studies suggest that, in the setting of post-exposure prophylaxis, co-administration of BCV with vaccination should be considered

  15. Synthesis and properties of 5,10,15,20-tetrakis[4-(3-N,N-dimethylaminopropoxy)phenyl] chlorin as potential broad-spectrum antimicrobial photosensitizers.

    Science.gov (United States)

    Ferreyra, Darío D; Reynoso, Eugenia; Cordero, Paula; Spesia, Mariana B; Alvarez, M Gabriela; Milanesio, M Elisa; Durantini, Edgardo N

    2016-05-01

    A novel 5,10,15,20-tetrakis[4-(3-N,N-dimethylaminopropoxy)phenyl]chlorin (TAPC) was synthesized by reduction of the corresponding porphyrin TAPP with p-toluenesulfonhydrazide, followed by selective oxidation with o-chloranil. Spectroscopic properties and the photodynamic activity of these photosensitizers were compared in N,N-dimethylformamide. An increase in the absorption band at 650nm was found for the chlorin derivative with respect to TAPP. These photosensitizers emit red fluorescence with quantum yields of 0.15. Both compounds were able to photosensitize singlet molecular oxygen with quantum yields of about 0.5. Also, the formation of superoxide anion radical was detected in the presence of TAPC or TAPP and NADH. Photodynamic inactivation was investigated on a Gram-positive bacterium Staphylococcus aureus, a Gram-negative bacterium Escherichia coli and a fungal yeast Candida albicans cells. In vitro experiments showed that TAPC or TAPP were rapidly bound to microbial cells at short incubation periods. These photosensitizers, without intrinsic positive charges, contain four basic amino groups. These substituents can be protonated at physiological pH, increasing the interaction with the cell envelopment. Photosensitized inactivation improved with an increase of both photosensitizer concentrations and irradiation times. After 15min irradiation, a 7 log reduction of S. aureus was found for treated with 1μM photosensitizer. Similar result was obtained with E. coli after using 5μM photosensitizer and 30min irradiation. Also, the last conditions produced a decrease of 5 log in C. albicans cells. Therefore, TAPC was highly effective as a broad-spectrum antimicrobial photosensitizer. PMID:26994333

  16. Ciprofloxacin prophylaxis delays initiation of broad-spectrum antibiotic therapy and reduces the overall use of antimicrobial agents during induction therapy for acute leukaemia: A single-centre study.

    Science.gov (United States)

    Hallböök, Helene; Lidström, Anna-Karin; Pauksens, Karlis

    2016-06-01

    Background Due to an outbreak of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli and Klebsiella pneumoniae, the routine use of fluoroquinolone prophylaxis was questioned. As a result, this study was conducted with the aim to evaluate the impact of ciprofloxacin-prophylaxis on the use of broad-spectrum antibioctics and anti-mycotics. Methods A cohort of 139 consecutive patients with acute leukaemia treated with remission-inducing induction chemotherapy between 2004-2012 at the Department of Haematology in Uppsala University Hospital was analysed. Results Fifty-three patients (38%) received broad-spectrum antibiotics at the initiation of chemotherapy and were not eligible for prophylaxis. Of the remaining patients, the initiation of broad-spectrum antibiotics was delayed by 3 days in those receiving ciprofloxacin prophylaxis (n = 47) compared with those receiving no prophylaxis (n = 39). The median duration of systemic antibiotic treatment was 6 days shorter in patients receiving ciprofloxacin prophylaxis (12 vs 18 days; p = 0.0005) and the cumulative (total) median days on systemic antibiotic treatment was shortened by 8 days (15 vs 23 days, p = 0.0008). Piperacillin/tazobactam (p = 0.02), carbapenems (p = 0.05) and empiric broad-spectrum antifungals (p antibiotic use in this study. These benefits must be evaluated vs the risks of development of resistant bacterial strains, making fluoroquinolone prophylaxis an open question for debate. PMID:27030917

  17. The landscape of host transcriptional response programs commonly perturbed by bacterial pathogens: towards host-oriented broad-spectrum drug targets.

    Directory of Open Access Journals (Sweden)

    Yared H Kidane

    Full Text Available BACKGROUND: The emergence of drug-resistant pathogen strains and new infectious agents pose major challenges to public health. A promising approach to combat these problems is to target the host's genes or proteins, especially to discover targets that are effective against multiple pathogens, i.e., host-oriented broad-spectrum (HOBS drug targets. An important first step in the discovery of such drug targets is the identification of host responses that are commonly perturbed by multiple pathogens. RESULTS: In this paper, we present a methodology to identify common host responses elicited by multiple pathogens. First, we identified host responses perturbed by each pathogen using a gene set enrichment analysis of publicly available genome-wide transcriptional datasets. Then, we used biclustering to identify groups of host pathways and biological processes that were perturbed only by a subset of the analyzed pathogens. Finally, we tested the enrichment of each bicluster in human genes that are known drug targets, on the basis of which we elicited putative HOBS targets for specific groups of bacterial pathogens. We identified 84 up-regulated and three down-regulated statistically significant biclusters. Each bicluster contained a group of pathogens that commonly dysregulated a group of biological processes. We validated our approach by checking whether these biclusters correspond to known hallmarks of bacterial infection. Indeed, these biclusters contained biological process such as inflammation, activation of dendritic cells, pro- and anti- apoptotic responses and other innate immune responses. Next, we identified biclusters containing pathogens that infected the same tissue. After a literature-based analysis of the drug targets contained in these biclusters, we suggested new uses of the drugs Anakinra, Etanercept, and Infliximab for gastrointestinal pathogens Yersinia enterocolitica, Helicobacter pylori kx2 strain, and enterohemorrhagic Escherichia

  18. A broad spectrum anti-HIV inhibitor significantly disturbs V1/V2 domain rearrangements of HIV-1 gp120 and inhibits virus entry.

    Science.gov (United States)

    Berinyuy, Emiliene; Soliman, Mahmoud E S

    2016-01-01

    Inhibition of human immunodeficiency virus (HIV) entry into target human cells is considered as a critical strategy for preventing HIV infection. Conformational shifts of the HIV-1 envelope glycoprotein (gp120) facilitates the attachment of the virus to target cells, therefore gp120 remains an attractive target for antiretroviral therapy development. Compound 18A has been recently identified as a broad-spectrum anti-HIV inhibitor. It was proposed that 18A disrupts rearrangements of V1/V2 region in gp120; however, the precise mechanism by which 18A interferes with the inherent motion of V1/V2 domain remains obscure. In this report, we elaborate on the binding mode of compound 18A to the closed conformation of a soluble cleaved gp120 and further examine the dynamic motion of V1/V2 region in both gp120 and the gp120-18A complex via all-atom molecular dynamics simulations. In this work, comparative molecular dynamic analyses revealed that 18A makes contact with Leu179, Ile194, Ile424, Met426 W427, E370 and Met475 in the main hydrophobic cavity of the unliganded gp120 and disrupts the restructuring of V1/V2 domain observed in apo gp120. The unwinding of α1 and slight inversion of β2 in gp120 leads to the shift of VI/V2 domain away from the V3 N-terminal regions and toward the outer domain. Stronger contacts between Trp425 and Trp112 rings may contribute to the reduced flexibility of α1 observed upon 18A binding thereby inhibiting the shifts of the V1/V2 region. Binding of 18A to gp120: (1) decreases the overall flexibility of the protein and (2) inhibits the formation a gp120 conformation that closely ressembles a CD4-bound-like conformation. Information gained from this report not only elaborates on important dynamic features of gp120, but will also assist with the future designs of potent gp120 inhibitors as anti-HIV. PMID:26446906

  19. Synthesis, Characterization, and In Vitro and In Vivo Evaluations of 4-(N-Docosahexaenoyl 2′, 2′-Difluorodeoxycytidine with Potent and Broad-Spectrum Antitumor Activity

    Directory of Open Access Journals (Sweden)

    Youssef W. Naguib

    2016-01-01

    Full Text Available In this study, a new compound, 4-(N-docosahexaenoyl 2′, 2′-difluorodeoxycytidine (DHA-dFdC, was synthesized and characterized. Its antitumor activity was evaluated in cell culture and in mouse models of pancreatic cancer. DHA-dFdC is a poorly soluble, pale yellow waxy solid, with a molecular mass of 573.3 Da and a melting point of about 96°C. The activation energy for the degradation of DHA-dFdC in an aqueous Tween 80–based solution is 12.86 kcal/mol, whereas its stability is significantly higher in the presence of vitamin E. NCI-60 DTP Human Tumor Cell Line Screening revealed that DHA-dFdC has potent and broad-spectrum antitumor activity, especially in leukemia, renal, and central nervous system cancer cell lines. In human and murine pancreatic cancer cell lines, the IC50 value of DHA-dFdC was up to 105-fold lower than that of dFdC. The elimination of DHA-dFdC in mouse plasma appeared to follow a biexponential model, with a terminal phase t1/2 of about 58 minutes. DHA-dFdC significantly extended the survival of genetically engineered mice that spontaneously develop pancreatic ductal adenocarcinoma. In nude mice with subcutaneously implanted human Panc-1 pancreatic tumors, the antitumor activity of DHA-dFdC was significantly stronger than the molar equivalent of dFdC alone, DHA alone, or the physical mixture of them (1:1, molar ratio. DHA-dFdC also significantly inhibited the growth of Panc-1 tumors orthotopically implanted in the pancreas of nude mice, whereas the molar equivalent dose of dFdC alone did not show any significant activity. DHA-dFdC is a promising compound for the potential treatment of cancers in organs such as the pancreas.

  20. Biological control of chestnut blight in Portugal

    OpenAIRE

    Martins, Luís; Castro, João Paulo; Gouveia, Eugénia

    2013-01-01

    Plant protection is a multi-disciplinary subject and different strategies need to be addressed for sustainable plant health management Biological control is an ecosystem-based approach extending from lab based investigation to fie ld applications. Hipovirulence is a specific method for biological control of Chestnut Blight a lethal disease of the American and European chestnut. The causal pathogen of Chestnut Blight is Cryphonectria parasitica a fungus of Asian origin which ...

  1. [In vitro and in vivo activity of a combination of clavulanic acid and amoxicillin against Klebsiella pneumoniae producing extended broad-spectrum betalactamase (CTX-1, SHV-3, SHV-4)].

    Science.gov (United States)

    Migueres, M L; Ronco, E; Guenounou, M; Philippon, A

    1989-05-01

    In vitro activity of an aminopenicillin (amoxicillin or ampicillin) combined with a betalactamase inhibitor (clavulanic acid or sulbactam, 2 mg/l) was examined against 39 strains of K. pneumoniae producing 3 types of extended broad spectrum betalactamases (CTX-1, SHV-3, SHV-4). Clavulanic acid produces the best synergistic effect. The in vivo activity of Augmentin (amoxicillin + clavulanic acid), 1 g once or twice a day, during 10 +/- 3 days was evaluated on 10 cases urinary tract infections in paraplegic patients. After 3 days, no leucocyturia was observed and bacteria were no more detected. The inhibitory effect of clavulanic acid for the extended broad-spectrum betalactamases shows that such an association could be probably chosen as well for treatment urinary infection. PMID:2674869

  2. A New Derivative of Valproic Acid Amide Possesses a Broad-spectrum Antiseizure Profile and Unique Activity Against Status Epilepticus and Organophosphate Neuronal Damage

    Science.gov (United States)

    White, H. Steve; Alex, Anitha B.; Pollock, Amanda; Hen, Naama; Shekh-Ahmad, Tawfeeq; Wilcox, Karen S.; McDonough, John H.; Stables, James P.; Kaufmann, Dan; Yagen, Boris; Bialer, Meir

    2011-01-01

    displayed anticonvulsant activity in the rat pilocarpine model of SE. Thirty minutes after the induction of SE, the calculated rat-ED50 for SPD against convulsive SE in this model was 84mg/kg. SPD was not neuroprotective in the organotypic hippocampal slice preparation; however, it did display hippocampal neuroprotection in both SE models and cognitive sparing in the MWM which was associated with its antiseizure effect against pilocarpine-induced SE. When administered 20 and 40min after SE onset, SPD (100-174mg/kg) produced long-lasting efficacy (e.g., 4-8hr) against soman-induced convulsive and electrographic SE in both rats and guinea pigs. SPD-ED50 values in guinea pigs were 67mg/kg and 92mg/kg at when administered at SE onset or 40min after SE onset, respectively. Assuming linear PK, the PK-PD results (rats) suggests that effective SPD plasma levels ranged between 8-40mg/L (20 min post onset of soman-induced seizures) and 12-50mg/L (40 min post onset of soman-induced seizures). The time to peak (tmax) pharmacodynamic effect (PD-tmax) occurred after the PK-tmax thereby suggesting that SPD undergoes slow distribution to extra-plasmatic sites likely responsible for SPD’s antiseizure activity. Significance The results demonstrate that SPD is a broad-spectrum antiseizure compound that blocks SE induced by pilocarpine and soman and affords in vivo neuroprotection that is associated with cognitive sparing. Its activity against SE is superior to diazepam in terms of rapid onset, potency and its effect on animal mortality and functional improvement. PMID:22150444

  3. Selection for bacterial leaf-blight (Xanthomonas oryzae) and sheath-blight (Rhizoctonia oryzae) resistant mutants in a collection of early rice mutants

    International Nuclear Information System (INIS)

    Two of the most important and common rice diseases in Indonesia are bacterial leaf blight (BLB) and sheath blight (SB). The best rice yielding varieties in Indonesia, Pelita I/1 and IR5, were treated with gamma radiation and EMS. All the early maturing mutants which were selected from M2 and M3 generations, and afterwards in the M8 generation we tested for their reaction to bacterial leaf blight and sheath blight. Pelita I/1 is moderately resistant to BLB and moderately susceptible to SB, but IR5 is susceptible to BLB or SB. At 30 and 60 days after transplanting, 107 early maturing mutants were inoculated with BLB. The bacteria were isolated from three different rice fields, and grown into Wakimoto media. Inoculation was done by the cutting method with suspension of 10-7-10-8cell/cm3. The virulence of bacteria isolated from the three fields was different. Resistant mutants were only observed in the Pelita I/1 early mutant collection; however, moderate resistance was found in the IR5 early mutants collection. At late growth stage the plant seems relatively more resistant to BLB. Early mutants of Pelita I/1 were inoculated with fungus SB following the procedure of the International Rice Sheath Blight Nursery (IRSHBN). Of 96 mutants, 55 were susceptible and 41 were moderately susceptible. Pelita I/1 was moderately susceptible with 48% damage and, compared with this, 9 mutant lines showed less than 40% damage. Selection was also carried out by natural infection; however, owing to ecoclimatic conditions the result was not convincing. (author)

  4. The Role of Antioxidant Enzymes in Adaptive Responses to Sheath Blight Infestation under Different Fertilization Rates and Hill Densities

    Directory of Open Access Journals (Sweden)

    Wei Wu

    2014-01-01

    Full Text Available Sheath blight of rice, caused by Rhizoctonia solani, is one of the most devastating rice diseases worldwide. No rice cultivar has been found to be completely resistant to this fungus. Identifying antioxidant enzymes activities (activity of superoxide dismutase (SOD, peroxidase (POD, and catalase (CAT and malondialdehyde content (MDA responding to sheath blight infestation is imperative to understand the defensive mechanism systems of rice. In the present study, two inoculation methods (toothpick and agar block method were tested in double-season rice. Toothpick method had greater lesion length than agar block method in late season. A higher MDA content was found under toothpick method compared with agar block method, which led to greater POD and SOD activities. Dense planting caused higher lesion length resulting in a higher MDA content, which also subsequently stimulated higher POD and SOD activity. Sheath blight severity was significantly related to the activity of antioxidant enzyme during both seasons. The present study implies that rice plants possess a system of antioxidant protective enzymes which helps them in adaptation to sheath blight infection stresses. Several agronomic practices, such as rational use of fertilizers and optimum planting density, involved in regulating antioxidant protective enzyme systems can be regarded as promising strategy to suppress the sheath blight development.

  5. The role of antioxidant enzymes in adaptive responses to sheath blight infestation under different fertilization rates and hill densities.

    Science.gov (United States)

    Wu, Wei; Wan, Xuejie; Shah, Farooq; Fahad, Shah; Huang, Jianliang

    2014-01-01

    Sheath blight of rice, caused by Rhizoctonia solani, is one of the most devastating rice diseases worldwide. No rice cultivar has been found to be completely resistant to this fungus. Identifying antioxidant enzymes activities (activity of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT)) and malondialdehyde content (MDA) responding to sheath blight infestation is imperative to understand the defensive mechanism systems of rice. In the present study, two inoculation methods (toothpick and agar block method) were tested in double-season rice. Toothpick method had greater lesion length than agar block method in late season. A higher MDA content was found under toothpick method compared with agar block method, which led to greater POD and SOD activities. Dense planting caused higher lesion length resulting in a higher MDA content, which also subsequently stimulated higher POD and SOD activity. Sheath blight severity was significantly related to the activity of antioxidant enzyme during both seasons. The present study implies that rice plants possess a system of antioxidant protective enzymes which helps them in adaptation to sheath blight infection stresses. Several agronomic practices, such as rational use of fertilizers and optimum planting density, involved in regulating antioxidant protective enzyme systems can be regarded as promising strategy to suppress the sheath blight development. PMID:25136671

  6. A dose escalating phase I study of GLPG0187, a broad spectrum integrin receptor antagonist, in adult patients with progressive high-grade glioma and other advanced solid malignancies

    OpenAIRE

    Cirkel, Geert A.; Kerklaan, Bojana Milojkovic; Vanhoutte, Frédéric; Van der Aa, Annegret; Lorenzon, Giocondo; Namour, Florence; Pujuguet, Philippe; Darquenne, Sophie; de Vos, Filip Y. F.; Snijders, Tom J.; Voest, Emile E; Schellens, Jan H.M.; Lolkema, Martijn P

    2016-01-01

    Summary Background Integrin signaling is an attractive target for anti-cancer treatment. GLPG0187 is a broad spectrum integrin receptor antagonist (IRA). GLPG0187 inhibited tumor growth and metastasis in mouse models. Methods We aimed to determine the Recommended Phase II Dose (RP2D) and to assess safety and tolerability of continuous i.v. infusion in patients with advanced malignant solid tumors. Anticipated dose levels were 20, 40, 80, 160, 320, and 400 mg/day in a modified 3 + 3 design. Pl...

  7. Epidemiology and integrated control of potato late blight in Europe

    DEFF Research Database (Denmark)

    Cooke, L R; Schepers, H T A M; Hermansen, A;

    2011-01-01

    NW Europe and a table of the specific attributes of the most important fungicides in Europe are presented. The development and use of decision support systems (DSSs) in NW Europe are described. In The Netherlands, it is estimated that almost 40% of potato growers use recommendations based on...... commercially available DSS. In the Nordic countries, a new DSS concept with a fixed 7-day spray interval and a variable dose rate is being tested. In the UK, commercially available DSSs are used for c. 8% of the area. The validity of Smith Periods for the new population of P. infestans in the UK is currently...

  8. Cisgenesis: a novel way to combat late blight

    OpenAIRE

    Haverkort, A.J.

    2009-01-01

    In most countries with temperate climates, cereal, notably wheat, is the most important arable crop. In a few countries such as the Netherlands, potato dominates. In the European Union, over 50 million hectares of wheat is grown against approximately two million hectares of potato, yielding some 70 million tons of tubers. The majority of the produce is consumed as fresh table potatoes but almost one fifth is processed into starch for industrial and food industry purposes, into frozen products...

  9. Function of Two Potato ESTs EL732276 and EL732318 Related to Late Blight Resistance Using Virus-induced Gene Silencing(VIGS)%利用病毒诱导的基因沉默(VIGS)技术快速鉴定两个马铃薯晚疫病抗性相关EST片段EL732276和EL732318的功能

    Institute of Scientific and Technical Information of China (English)

    李亚军; 田振东; 柳俊; 谢从华

    2012-01-01

    马铃薯晚疫病是由致病疫霉[Phytophthora infestans (Mont.) de Bary]引起的第一大作物病害,目前已严重限制了全球马铃薯的生产和发展.马铃薯晚疫病抗性分子机理的研究一直是抗病育种中的热点问题.本研究利用病毒诱导的基因沉默(virus-induced gene silencing,VIGS)技术,在本氏烟草(Nicotina benthamiana)中沉默两个马铃薯晚疫病水平抗性相关的基因片段EL 7322 76和EL732318.目的基因沉默后的烟草接种晚疫病菌P.infestans,根据病斑生长速率LGR(length grow rate)来了解这两个基因是否参与烟草对晚疫病的抗性反应.结果表明,目的基因片段EL732276和EL732318被成功地插入烟草脆裂病毒(Tobacco rattle virus,TRV)载体中.利用携带八氢番茄红素脱氢酶基因(phytoene desaturae,PDS)的TRV重组载体病毒接种烟草,感染病毒的烟草植株表现光漂白现象,说明VIGS体系有效.用携带目的片段的重组载体病毒TRV:EL732276和TRV:EL732318感染烟草植株,一个月后,烟草叶片接种晚疫病菌P.infestans,从接种P.infestans的烟草叶片上可以看出,感染TRV空载体的对照烟草叶片上病斑扩展速率非常缓慢,而目的片段EL732276和EL732318沉默后的烟草叶片可见明显的水浸状病斑和少量白色的晚疫病菌菌丝.进一步的分析表明TRV:EL732276重组载体病毒侵染的烟草接种P.infestans后LGR值极显著上升,TRV:EL732318病毒侵染的烟草接种P.infestans后LGR值显著上升,表明EL732276和EL732318同源基因在烟草中沉默后,烟草对P.infestans的抗性显著降低.研究结果认为,病毒诱导的基因沉默技术可在本氏烟草中初步快速鉴定马铃薯抗病相关基因的功能.%Potato late blight, ranks as world agriculture's most destructive disease, which are caused byPhytophthora infestans (Mont.) de Bary, and potato production has been seriously limited by this disease. Research on molecular mechanism of resistance against P

  10. Development of forecasting elements for minimization of fungicide treatment in potato protection against early blight in Moscow region

    Directory of Open Access Journals (Sweden)

    Penjkin Roman V.

    2013-01-01

    Full Text Available Early blight of potato (the agent is imperfect fungus Alternaria alternata (Fr. Keissl. is a serious disease of potatoes under hot conditions. This disease is important in the regions of Eastern and Southern Europe, Asia and Africa. It is controlled with intensive application of fungicides commonly used against late blight. However, currently fungicides cause undesirable damage to humans and the environment. Elements of forecasting the early blight have been developed in order to minimize the dosage of fungicides. Primary symptoms (chloroses and necroses and the potential of pathogen natural inoculum (determination of disease severity, indexes of formation of conidia and aggressiveness; as well as the current weather conditions were registered and determined in the potato signal plots (no treatments or artificial inoculation near main potato cropping. Seed tubers of main potato cropping were preliminary treated with plant growth regulator Circon and micro-fertilizer Siliplant produced by the Russian Company NEST-M. These preparations proved to be effective in acceleration process of potato growth and in delaying the early blight onset by 5-10 days. The same potato cultivar must be planted both in signaling plots and in the fields. Well-timed determination of primary symptoms and potential of pathogen in­oculum allowed us to understand the damage that early blight can cause to potato natural inoculation, and hence to provide well-timed application of fungicides with optimum dosages in mixture with Circon or Silipant. This forecasting method can be helpful for the adequate management of early blight and decrease of the environmental damages.

  11. Development of targeted therapy for a broad spectrum of cancers (pancreatic cancer, ovarian cancer, glioblastoma and HCC) mediated by a double promoter plasmid expressing diphtheria toxin under the control of H19 and IGF2-P4 regulatory sequences

    Science.gov (United States)

    Amit, Doron; Hochberg, Abraham

    2012-01-01

    Background The human IGF2-P4 and H19 promoters are highly active in a variety of human cancers, while existing at a nearly undetectable level in the surrounding normal tissue. Single promoter vectors expressing diphtheria toxin A-fragment (DTA) under the control regulation of IGF2-P4 or H19 regulatory sequences (IGF2-P4-DTA and H19-DTA) were previously successfully used in cell lines, animal models and recently in human patients with superficial cell carcinoma of the bladder, pancreatic cancer and ovarian cancer (treated with H19-DTA). However this targeted medicine approach may be limited, as not all cancer patients express high levels of H19 and it requires prerequisite diagnostic test for H19. Hence, a double promoter DTA-expressing vector was created, carrying on a single construct two separate genes expressing the diphtheria toxin A-fragment (DTA), from two different regulatory sequences, selected from the cancer-specific promoters H19 and IGF2-P4. Methods H19 and IGF2-P4 gene expression was tested in cell lines of a broad spectrum of different carcinomas (bladder, pancreas, ovary, glioblastoma and HCC), by RT-PCR. The therapeutic potential of the double promoter toxin vector H19-DTA-(IGF2)-P4-DTA was tested in the different cancer cell lines. Results The double promoter vector exhibited superior inhibition activity compared to the single promoter expression vectors, in the different cancer cell lines furthermore, the double promoter vector H19-DTA-P4-DTA exhibited augmented-than-additive anti-cancer activity relative to single promoter expression vectors carrying either DTA sequence alone, when tested in a broad spectrum of tumor cells. Conclusions Our findings show that administration of H19-DTA-P4-DTA has the potential to reach tumor cells, deliver its intracellular toxin without targeting normal tissues, and thus may help reduce tumor burden, improve the quality of life of the patient; and prolong their life span. As H19 and IGF2 were expressed in a broad

  12. Broad-spectrum pollination of Plectranthus neochilus

    Directory of Open Access Journals (Sweden)

    C. H. Stirton

    1977-12-01

    Full Text Available The pollination ecology of Plectranthus neochilus Schltr. is discussed and compared with that of another garden plant,  Plectranthus barbatus Andr.. Pollinators and flower visitors of P. neochilus include members of  the Megachilidae, Anthophoridae, Syrphidae, Bombyliidae, Sphingidae, Apidae.

  13. Broad-Spectrum Solution-Processed Photovoltaics

    Science.gov (United States)

    Ip, Alexander Halley

    High global demand for energy coupled with dwindling fossil fuel supply has driven the development of sustainable energy sources such as solar photovoltaics. Emerging solar technologies aim for low-cost, solution-processable materials which would allow wide deployment. Colloidal quantum dots (CQDs) are such a materials system which exhibits the ability to absorb across the entire solar spectrum, including in the infrared where many technologies cannot harvest photons. However, due to their nanocrystalline nature, CQDs are susceptible to surface-associated electronic traps which greatly inhibit performance. In this thesis, surface engineering of CQDs is presented through a combined ligand approach which improves the passivation of surface trap states. A metal halide treatment is found to passivate quantum dot surfaces in solution, while bifunctional organic ligands produce a dense film in solid state. This approach reduced midgap trap states fivefold compared with conventional passivation strategies and led to solar cells with a record certified 7.0% power conversion efficiency. The effect of this process on the electronic structure is studied through photoelectron spectroscopy. It is found that while the halide provides deep trap passivation, the nature of the metal cation on the CQD surface affects the density of band tail states. This effect is explored further through a wide survey of materials, and it is found that the coordination ability of the metal cation is responsible for the suppression of shallow traps. With this understanding of CQD surface passivation, broad spectral usage is then explored through a study of visible-absorbing organolead halide perovskite materials as well as narrow-bandgap CQD solar cells. Control over growth conditions and modification of electrode interfaces resulted in efficient perovskite devices with effective usages of visible photons. For infrared-absorbing CQDs, it is found that, in addition to providing surface trap passivation, ligands must be used to prevent nanocrystal fusion that leads to introduction of band tail states. The most efficient solution-processed infrared solar cells yet reported are achieved through this approach, opening a path towards low-cost photovoltaics with high spectral usage.

  14. Examination of Early Blight Resistance Derived From S. Raphanifolium

    Science.gov (United States)

    Early blight of potato (Solanum tuberosum L.), caused by Alternaria solani is a major cause of economic losses in many potato growing regions. Growers and breeders are interested in the development of potato cultivars with resistance to early blight as a means to decrease usage of fungicide applica...

  15. 瑞士马铃薯晚疫病监测及决策支持系统PhytoPRE+2000在网络上的实现%Monitoring of potato late blight in Switzerland and development of PhytoPRE+2000, an internet based decision support system

    Institute of Scientific and Technical Information of China (English)

    FORRERHR; STEENBLOCKT; 等

    2001-01-01

    Since 1990 late blight (LB) epidemics are monitored in Switzerland with a LB-observation network of untreated potato plots. In addition, information about the first disease observations in the commercial potato production has been collected and used for local and regional warnings. In 10 out of 12 years the epidemic started already in May. In 9 out of 12 years the first LB-attacks were found in early, previously covered potatoes. From 2001, Swiss potato growers will be supported by an Internet based version of the LB decision support system (DSS) PhytoPRE+2000. Core parameters of this DSS are the actual state of the national LB situation and historical and forecasted weather data. The weather data are used to recognise main infection and sporulation periods (MISP) of Phytophthora infestans. From 1996 to 2000, the MISP model was used in field trials as a trigger of LB-fungicide applications. Compared to PhytoPRE+95 no reduction in fungicide treatments could be realised in wet years, but up to 40% in rather dry years. In field trials the MISP triggered LB-control was as good as in PhytoPRE+95 or at least as good as those of other DSSs tested in Swiss field trials. In 1999 and 2000, the MISP model was embedded in the new DSS PhytoPRE+2000. To assure an efficient information exchange an Internet solution was selected. PhytoPRE+2000 is a DSS for local and field specific LB-recommendations and a comprehensive LB-information and warn-system. Daily actualised disease maps and MISP-graphs can be accessed on the Internet and illustrate the LB-risk situation for all Swiss potato growing areas. The structure of PhytoPRE+2000 was determined in a close cooperation with the Swiss potato growers association and the cantonal plant protection services.%自1990年以来,瑞士在全国范围内保留了一些不经防治的马铃薯田并设立了晚疫病监测网.商品生产基地马铃薯晚疫病的首次侵染信息被用来指导防治区域性病害.近12年期间,有10

  16. Cowpea mutation breeding for resistance to bacterial blight Xanthomonas vignicola (Burk.)

    International Nuclear Information System (INIS)

    In 1986, seeds of the variety ''Red Cowpea 6-1 US'' were treated with gamma rays (20, 40, 60 and 80 kR). In M3, the treated material segregated into erect and semi-spreading plant types, light green and green pod colours, and red, brown and creamy seed coats. There was further segregation in M4 for a larger pod size and better tolerance to diseases. In M5, some of the lines segregated into early and late maturity and it was found that resistance to diseases was, to some degree, associated with late maturity. Only slight changes in these characters were found in M6. Sixty mutant lines with desirable characteristics were established. Most of the mutant lines flowered synchronously, and had a long peduncle and all the pods above the plant canopy. Moreover, they were superior in plant type, pod size, seed size and tolerance to bacterial blight and other diseases. In 1989, they were tested for yield; most had a 20-46% higher yield than the blight susceptible parent. (author). 2 tabs

  17. 不同品种香蕉内生菌分离及广谱拮抗菌的筛选%Endophytes Isolation and Broad-spectrum Antagonistic Bacterias Screening from Banana

    Institute of Scientific and Technical Information of China (English)

    王梦颖; 周登博; 井涛; 胡一凤; 高祝芬; 谢晴宜; 张锡炎; 戚春林

    2014-01-01

    In order to determine the main distribution of endophytes and their broad-spectrum antimicrobial activity, endophytes were obtained from healthy and diseased tissues of two disease-resistant and one disease susceptible banana cultivars. Endophytes were separated from roots, corms, pseudostems, leaves and store in the ultra-low on Luria-Bertani(LB), Yeast Extract with supplements(YE), and Potato Dextrose Agar(PDA)strain store medium. Then screened broad-spectrum antagonistic bacteria which against Fusarium oxysporum f. sp. Cubense, Curvularia lunata, Curvularia fallax, Corynespora cassiicola(Berk&Curt)Wei, Alternaria musae, Deightoniella troulosa, Colletotrichum musae, Pestalogiopsis sp., Btoryosphaeria dothidea. Taxonomy identification of 041, 04-1, 19-1, 03A-1 was conducted by evaluating morphologic characteristics and 16S rDNA gene sequences for phylogenetic analysis. After purification, total of 438 endophytes were obtained. The total of isolates showed that we obtained 240 strains bacteria, followed by 142 strains actinomycetes, and 56 strains fungi. The richest number of endophytes that isolated from diseased NanTian banana cultivars(128). Ten actinomyces and two bacterias were determined to possess antibiotic activity against Ten banana pathogens. Isolates 041 was the most effective and had 28.13±1.89 mm width of inhibition zone. Isolated 041, 04-1, 19-1, 034-1 were identified as Streptomyces misionensis.%旨在探究抗病品种与易感品种香蕉的健康株和病株内生菌与其中广谱拮抗菌的主要分布规律,并对广谱拮抗菌进行拮抗活性的测定。以样品根、球茎、假茎、叶为材料分离培养内生菌,在实验室条件下,筛选对供试的10种香蕉致病菌均有良好拮抗活性的菌株并测定它们的拮抗活性,对活性最强的菌株进行形态学、16S rDNA序列同源性分析。结果显示,分离得到内生菌438株,其中细菌240株,放线菌142株,真菌56株。抗病品种南天

  18. 严重烧伤患者早期短程应用高效抗生素的研究%Clinical study on the early and short - term use of antibiotics with broad spectrum in severely burned patients

    Institute of Scientific and Technical Information of China (English)

    宗光全; 张茂红; 章冠东; 杜庆安

    2001-01-01

    Objective To investigate the prevention and treatment effects of early and short - term use of antibiotics with broad spectrum on postburn severe infection in severely burned patients . Methods Thirty - five burn patients with TBSA from 50% to 95% were enrolled in the study. The patients were divided into early prevention[ 20 cases, antibiotics were used started from 6 postburn hours (PBH)] and delayed prevention( 15 cases,antibiotics were applied after 48 PBH )groups. Plasma levels of LPS,TNFa and IL -8 were dynamically monitored with the concomitant observation of clinical signs of postburn sepsis.Results After major burns,the plasma levels of LPS,TNFα and IL -8 increased evidently and reached the peak values on 3 ~5 postburn days(PBD). But the levels of all above factors in the early group were obviously lower than those in the delayed group( P < 0. 05 ~0. 01 ). The incidencies of sepsis and internal organ complications within 2 postburn weeks were much lower in the early group than those in the delayed group (P < 0. 05). The subeschar bacterial quantification on 4 ~ 7 PBD was evidently lower in the early group than that in the delayed group ( P < 0. 01 ) . Conclusion Early and short - term use of antibiotics with broad spectrum in severely burned patients could effectively prevent postburn severe infection and lower down the incidence of internal organ complications.%目的探讨早期短程应用高效抗生素对严重烧伤后患者感染的防治效果。方法烧伤患者35例,烧伤面积50%~95%。根据高效抗生素使用时机分为早防组(20例,伤后6 h内开始)和迟防组(15例,伤后48 h开始)。动态检测血浆内毒素( lipopolysaccharide, LPS ) 、肿瘤坏死因子(TNFα)和白细胞介素-8(IL-8)的变化,严密观察脓毒症各项指标。结果大面积烧伤后血LPS、TNFα和IL-8明显升高,于伤后3~5 d达高峰,但早防组明显低于迟防组(P<0.05~0.001)。伤后2周内脓毒症、内

  19. Novel Clostridium difficile Anti-Toxin (TcdA and TcdB) Humanized Monoclonal Antibodies Demonstrate In Vitro Neutralization across a Broad Spectrum of Clinical Strains and In Vivo Potency in a Hamster Spore Challenge Model

    Science.gov (United States)

    Qiu, Hongyu; Cassan, Robyn; Johnstone, Darrell; Han, Xiaobing; Joyee, Antony George; McQuoid, Monica; Masi, Andrea; Merluza, John; Hrehorak, Bryce; Reid, Ross; Kennedy, Kieron; Tighe, Bonnie; Rak, Carla; Leonhardt, Melanie; Dupas, Brian; Saward, Laura; Berry, Jody D.; Nykiforuk, Cory L.

    2016-01-01

    Clostridium difficile (C. difficile) infection (CDI) is the main cause of nosocomial antibiotic-associated colitis and increased incidence of community-associated diarrhea in industrialized countries. At present, the primary treatment of CDI is antibiotic administration, which is effective but often associated with recurrence, especially in the elderly. Pathogenic strains produce enterotoxin, toxin A (TcdA), and cytotoxin, toxin B (TcdB), which are necessary for C. difficile induced diarrhea and gut pathological changes. Administration of anti-toxin antibodies provides an alternative approach to treat CDI, and has shown promising results in preclinical and clinical studies. In the current study, several humanized anti-TcdA and anti-TcdB monoclonal antibodies were generated and their protective potency was characterized in a hamster infection model. The humanized anti-TcdA (CANmAbA4) and anti-TcdB (CANmAbB4 and CANmAbB1) antibodies showed broad spectrum in vitro neutralization of toxins from clinical strains and neutralization in a mouse toxin challenge model. Moreover, co-administration of humanized antibodies (CANmAbA4 and CANmAbB4 cocktail) provided a high level of protection in a dose dependent manner (85% versus 57% survival at day 22 for 50 mg/kg and 20 mg/kg doses, respectively) in a hamster gastrointestinal infection (GI) model. This study describes the protective effects conferred by novel neutralizing anti-toxin monoclonal antibodies against C. difficile toxins and their potential as therapeutic agents in treating CDI. PMID:27336843

  20. A dose escalating phase I study of GLPG0187, a broad spectrum integrin receptor antagonist, in adult patients with progressive high-grade glioma and other advanced solid malignancies.

    Science.gov (United States)

    Cirkel, Geert A; Kerklaan, Bojana Milojkovic; Vanhoutte, Frédéric; der Aa, Annegret Van; Lorenzon, Giocondo; Namour, Florence; Pujuguet, Philippe; Darquenne, Sophie; de Vos, Filip Y F; Snijders, Tom J; Voest, Emile E; Schellens, Jan H M; Lolkema, Martijn P

    2016-04-01

    Background Integrin signaling is an attractive target for anti-cancer treatment. GLPG0187 is a broad spectrum integrin receptor antagonist (IRA). GLPG0187 inhibited tumor growth and metastasis in mouse models. Methods We aimed to determine the Recommended Phase II Dose (RP2D) and to assess safety and tolerability of continuous i.v. infusion in patients with advanced malignant solid tumors. Anticipated dose levels were 20, 40, 80, 160, 320, and 400 mg/day in a modified 3 + 3 design. Plasma concentrations of GLPG0187 were assessed to characterize the pharmacokinetics (PK). C-terminal telopeptide of type I collagen (CTX) was used as pharmacodynamics marker. Results Twenty patients received GLPG0187. No dose limiting toxicities (DLTs) were observed. The highest possible and tested dose was 400 mg/day. Fatigue was the most frequently reported side effect (25 %). Recurrent Port-A-Cath-related infections and skin toxicity suggest cutaneous integrin inhibition. No dose-dependent toxicity could be established. PK analysis showed a short average distribution (0.16 h) and elimination (3.8 h) half-life. Continuous infusion resulted in dose proportional PK profiles. We observed decreases in serum CTX levels independent of the dose given, suggesting target engagement at the lowest dose level tested. Single agent treatment did not result in tumor responses. Conclusions GLPG0187 was well tolerated with a dose-proportional PK profile upon continuous infusion. No formal maximal tolerated dose could be established. GLPG0187 showed signs of target engagement with a favourable toxicity profile. However, continuous infusion of GLPG0187 failed to show signs of monotherapy efficacy. PMID:26792581

  1. Third generation cephalosporin resistant Enterobacteriaceae and multidrug resistant gram-negative bacteria causing bacteremia in febrile neutropenia adult cancer patients in Lebanon, broad spectrum antibiotics use as a major risk factor, and correlation with poor prognosis

    Directory of Open Access Journals (Sweden)

    Rima eMoghnieh

    2015-02-01

    Full Text Available Bacteremia remains a major cause of life-threatening complications in patients receiving anticancer chemotherapy. The spectrum and susceptibility profiles of causative microorganisms differ with time and place. Data from Lebanon are scarce. We aim at evaluating the epidemiology of bacteremia in cancer patients in a university hospital in Lebanon, emphasizing antibiotic resistance and risk factors of multi-drug resistant organism (MDRO-associated bacteremia.This is a retrospective study of 75 episodes of bacteremia occurring in febrile neutropenic patients admitted to the hematology-oncology unit at Makassed General Hospital, Lebanon, from October 2009-January 2012.It corresponds to epidemiological data on bacteremia episodes in febrile neutropenic cancer patients including antimicrobial resistance and identification of risk factors associated with third generation cephalosporin resistance (3GCR and MDRO-associated bacteremia. Out of 75 bacteremias, 42.7% were gram-positive (GP, and 57.3% were gram-negative (GN. GP bacteremias were mostly due to methicillin-resistant coagulase negative staphylococci (28% of total bacteremias and 66% of GP bacteremias. Among the GN bacteremias, Escherichia coli (22.7% of total, 39.5% of GN organisms and Klebsiellapneumoniae(13.3% of total, 23.3% of GN organisms were the most important causative agents. GN bacteremia due to 3GC sensitive (3GCS bacteria represented 28% of total bacteremias, while 29% were due to 3GCR bacteria and 9% were due to carbapenem-resistant organisms. There was a significant correlation between bacteremia with MDRO and subsequent intubation, sepsis and mortality. Among potential risk factors, only broad spectrum antibiotic intake >4 days before bacteremia was found to be statistically significant for acquisition of 3GCR bacteria. Using carbapenems or piperacillin/ tazobactam>4 days before bacteremia was significantly associated with the emergence of MDRO (p value<0.05.

  2. Novel Clostridium difficile Anti-Toxin (TcdA and TcdB Humanized Monoclonal Antibodies Demonstrate In Vitro Neutralization across a Broad Spectrum of Clinical Strains and In Vivo Potency in a Hamster Spore Challenge Model.

    Directory of Open Access Journals (Sweden)

    Hongyu Qiu

    Full Text Available Clostridium difficile (C. difficile infection (CDI is the main cause of nosocomial antibiotic-associated colitis and increased incidence of community-associated diarrhea in industrialized countries. At present, the primary treatment of CDI is antibiotic administration, which is effective but often associated with recurrence, especially in the elderly. Pathogenic strains produce enterotoxin, toxin A (TcdA, and cytotoxin, toxin B (TcdB, which are necessary for C. difficile induced diarrhea and gut pathological changes. Administration of anti-toxin antibodies provides an alternative approach to treat CDI, and has shown promising results in preclinical and clinical studies. In the current study, several humanized anti-TcdA and anti-TcdB monoclonal antibodies were generated and their protective potency was characterized in a hamster infection model. The humanized anti-TcdA (CANmAbA4 and anti-TcdB (CANmAbB4 and CANmAbB1 antibodies showed broad spectrum in vitro neutralization of toxins from clinical strains and neutralization in a mouse toxin challenge model. Moreover, co-administration of humanized antibodies (CANmAbA4 and CANmAbB4 cocktail provided a high level of protection in a dose dependent manner (85% versus 57% survival at day 22 for 50 mg/kg and 20 mg/kg doses, respectively in a hamster gastrointestinal infection (GI model. This study describes the protective effects conferred by novel neutralizing anti-toxin monoclonal antibodies against C. difficile toxins and their potential as therapeutic agents in treating CDI.

  3. Niclosamide inhibits leaf blight caused by Xanthomonas oryzae in rice

    OpenAIRE

    Sung-Il Kim; Jong Tae Song; Jin-Yong Jeong; Hak Soo Seo

    2016-01-01

    Rice leaf blight, which is caused by the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo), results in huge losses in grain yield. Here, we show that Xoo-induced rice leaf blight is effectively controlled by niclosamide, an oral antihelminthic drug and molluscicide, which also functions as an anti-tumor agent. Niclosamide directly inhibited the growth of the three Xoo strains PXO99, 10208 and K3a. Niclosamide moved long distances from the site of local application to distant rice tissues...

  4. Integrating Cultivar Resistance and Seed Treatment with Planting Dates to Manage Chickpea Ascochyta Blight

    Directory of Open Access Journals (Sweden)

    C. Akem

    2004-01-01

    Full Text Available The influence of chickpea (Cicer arietinum planting date on seasonal epidemics of Ascochyta blight caused by Ascochyta rabiei (Pass. Labrousse and on grain yield was evaluated during the 1997 and 1998 cropping seasons. Two chickpea cultivar (Ghab 1 and Ghab 3 and 2 breeding lines (FLIP 90-96 and F 88-85 were used in the field trials at 3 different locations representing the different agro ecological zones in which winter chickpea is grown in Syria and in most of the Mediterranean countries. Four field plantings were made at 14-day intervals from mid November to mid March. All plots were initially inoculated with infected debris and disease development followed natural prevailing environmental conditions. Ascochyta blight disease severity ratings were taken at early flowering and again at podding and grain yield for each plot was measured at harvest. There was a significant (p<0.05 increase in disease severity between the first and third planting in all the entries at all the locations and for both years. The difference in disease severity resulted in significant yield differences but not in differences in seed quality. Under Syrian and Mediterranean conditions, an increase in Ascochyta blight severity can be expected with early planting of chickpea before January and this can result in a corresponding big loss in crop yield. The loss in yield from disease through early plantings however, is more than compensated for, by the reduction in yield due to other environmental parameters in late spring planting, if moderate resistant cultivars are planted.

  5. Screening of chickpea advanced lines for sources of resistance against blight and wilt two major diseases of chickpea

    International Nuclear Information System (INIS)

    Chickpea (Cicer arietinum L.) an important food legume, ranks third in the world. In Pakistan yield of chickpea is low due to the prevalence of wilt and blight diseases - the two destructive diseases. The control measures available are not feasible and economical, except to exploit host plant resistance mechanism to identify the sources of resistance in existing chickpea germplasm. Fifty four advance chickpea genotypes were screened in blight screening nursery and wilt sick plot. Out of total 54 genotypes 23 were resistant and 16 were moderately resistant to Ascochyta blight disease. Among 23 resistant genotypes; K0058-09, K0062-09, K0066-09, D095-09, K07A005, BK05A015 and BK04A013 had disease rating mean of 3. The results of early wilt showed 19 genotypes as highly resistant and 15 as resistant. The genotypes K0070-09, BKK17106, CH 65/02 and BK04A013 were highly susceptible to wilt during early pathogen infection at seedling stage while the genotypes K0063-09, BKK17106 and BK04A013 were susceptible during late season. Resistance sources identified could be exploited directly and also may be transferred through hybridization to high yielding disease susceptible genotypes. (author)

  6. The Differences among Pear Genotypes to Fire Blight (Erwinia amylovora Attack, Based on Observations of Natural Infection

    Directory of Open Access Journals (Sweden)

    Adriana F. SESTRAS

    2008-08-01

    Full Text Available Fire blight, caused by the bacterium Erwinia amylovora, is one of the most damaging diseases of pear in the world. In Cluj-Napoca area, situated in central Transylvania, Romania, fire blight was observed first in 1994, very late comparative with the other countries from occidental Europe. The response of the pear cultivars and species from National Pear Collection from Cluj-Napoca to fire blight attack, assessed in natural conditions of infection, range on a large scale of variability, which denotes a strong influence of the genotype in expression of resistance or sensitivity to disease. From all genotypes, about 20.5% have not presented symptoms of attack, among them being the following: 'Blanquet precoce', 'Klementinka', 'Severianka', 'Beurre Bachelier', 'Kieffer Seedling', 'Er Shi Shinge', 'Beurre Amanlis', 'Bristol Cross', 'Beurre Liegel', 'Beurre Lucon', 'Grand Champion', 'Magness', 'Mericourt' etc. and several ancient autochthonous cultivars ('Pere malaiete', 'De zahar de Bihor', 'Cu miez rosu', 'Clopotele', 'Garoafa mare', 'Craiese', 'Para de apa'. Also, there were identified several species of Pyrus with no attack, as P. pollveria, P. common pear, P. lindlezi, P. malifolia, P. persica, P. ussuriensis, P. variolosa. The remarked genotypes could be potential sources for further breeding programmes and increase the number of genotypes available for breeding new pear cultivars resistant to Erwinia attack.

  7. Cougarblight EZ, a substantial update of the Cougarblight fire blight infection risk model

    Science.gov (United States)

    The development of practical, but reasonably accurate fire blight infection risk models is considered a critical factor in the management of fire blight. Cougarblight, an empirically designed fire blight infection risk assessment model, was originally developed prior to significant recent advances ...

  8. Niclosamide inhibits leaf blight caused by Xanthomonas oryzae in rice.

    Science.gov (United States)

    Kim, Sung-Il; Song, Jong Tae; Jeong, Jin-Yong; Seo, Hak Soo

    2016-01-01

    Rice leaf blight, which is caused by the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo), results in huge losses in grain yield. Here, we show that Xoo-induced rice leaf blight is effectively controlled by niclosamide, an oral antihelminthic drug and molluscicide, which also functions as an anti-tumor agent. Niclosamide directly inhibited the growth of the three Xoo strains PXO99, 10208 and K3a. Niclosamide moved long distances from the site of local application to distant rice tissues. Niclosamide also increased the levels of salicylate and induced the expression of defense-related genes such as OsPR1 and OsWRKY45, which suppressed Xoo-induced leaf wilting. Niclosamide had no detrimental effects on vegetative/reproductive growth and yield. These combined results indicate that niclosamide can be used to block bacterial leaf blight in rice with no negative side effects. PMID:26879887

  9. Mutation breeding of rice for bacterial leaf-blight resistance

    International Nuclear Information System (INIS)

    Seedlings of controls and of M2 generation originating from the irradiation treatment of seeds of four rice varieties with thermal neutrons, 60Co gamme-ray, ethylene-imine (EI), were inoculated with some isolates of Xanthomonas oryzae. The variability of the disease reaction in the populations arising from irradiation and chemical treatment increased both resistance and susceptibility compared with the control average, irrespective of chlorophyll mutations in M2. The increased variability was assumed to be due to polygenic mutations giving both germ types more resistance and more susceptibility to bacterial leaf blight. The value of the induced polygenic mutations in resistance breeding for bacterial leaf blight is briefly discussed. (author)

  10. Systems and models of fire blight (Erwinia amylovora prediction

    Directory of Open Access Journals (Sweden)

    Krzysztof Kielak

    2013-12-01

    Full Text Available The paper presents fire blight prediction models and systems, developed in Europe (system Billing - versions: BOS, BRS, BIS95 and originated from this system: Firescreen, FEUERBRA and ANLAFBRA and in United States (Californian system, model Maryblyt and system Cougarblight. Use of above models and systems in various climatic-geographic conditions and comparison of obtained prognostic data to real fire blight occurrence is reviewed. The newest trends in research on improvement of prognostic analyses parameters with their adjustment to particular conditions and consideration of infection source occurrence are also presented.

  11. Quince (Cydonia oblonga) emerges from the ashes of fire blight

    Science.gov (United States)

    The two-decade history of fire blight in Bulgaria revealed quince as one of the most frequently attacked hosts and its production on a large scale has almost been entirely eliminated. Nevertheless, this species will play an important epidemiological role as a permanent source of inoculum for other p...

  12. Integrated Control of Fire Blight with Bacterial Antagonists and Oxytetracycline

    Science.gov (United States)

    In the Pacific Northwest of the United States, the antibiotic streptomycin provided excellent control of fire blight until resistant isolates of Erwinia amylovora were prevalent. Oxytetracycline (Mycoshield) is now sprayed as an alternative antibiotic. We found that the duration of inhibitory acti...

  13. Integrated Control of Fire Blight with Antagonists and Oxytetracycline

    Science.gov (United States)

    In the Pacific Northwest of the United States, the antibiotic streptomycin provided excellent control of fire blight until resistant isolates of Erwinia amylovora arose. Oxytetracycline (Mycoshield) is now sprayed as an alternative antibiotic. We found that the duration of inhibitory activity of o...

  14. Budagovsky 9 rootstock: uncovering a novel resistance to fire blight

    Science.gov (United States)

    Budagovsky 9 (B.9) apple rootstock, displayed a high level of susceptibility (similar to M.9 rootstock) to fire blight bacteria (Erwinia amylovora) when leaves of non-grafted B.9 plants were inoculated. However, when older B.9 rootstock tissue was inoculated directly with E. amylovora, rootstock tis...

  15. Transcriptional response in apple to fire blight disease

    Science.gov (United States)

    Fire blight, caused by the bacterium Erwinia amylovora, is a destructive disease of apple, pear, and other plants in the subfamily Maloideae of the Rosaceae. The goal of this study was to use a global analysis of gene expression to characterize the temporal response of apple to infection by E. amyl...

  16. Identification of an emergent bacterial blight of garlic in Brazil

    Science.gov (United States)

    Outbreaks of a bacterial blight disease occurred on garlic (Allium sativum) cultivars Roxo Caxiense, Quiteria and Cacador in Southern Brazil, and threatened the main production regions of Rio Grande do Sul State. Symptoms were characterized by watersoaked reddish streaks along the leaf midrib, follo...

  17. Development and Preclinical Studies of Broad-spectrum Anti-HIV Agent (3′R,4′R)-3-Cyanomethyl-4-methyl-3′,4′-di-O-(S)-camphanoyl-(+)-cis-khellactone (3-Cyanomethyl-4-methyl-DCK)

    OpenAIRE

    Xie, Lan; Guo, Huan-Fang; LU, Hong; Zhuang, Xiao-Mei; Zhang, An-Ming; Wu, Gang; Ruan, Jin-xiu; Zhou, Ting; Yu, Donglei; Qian, Keduo; Lee, Kuo-Hsiung; Jiang, Shibo

    2008-01-01

    In prior investigation, we discovered that (3'R,4'R)-3-cyanomethyl-4-methyl-3',4'-di-O-(S)-camphanoyl-(+)-cis-khellactone (4, 3-cyanomethyl-4-methyl-DCK) showed promising anti-HIV activity. In these current studies, we developed and optimized successfully a practical ten-step synthesis for scale-up preparation to increase the overall yield of 4 from 7.8% to 32%. Furthermore, compound 4 exhibited broad-spectrum anti-HIV activity against wild-type and drug-resistant viral infection of CD4+ T ce...

  18. Biological Control Activities of Rice-Associated Bacillus sp. Strains against Sheath Blight and Bacterial Panicle Blight of Rice.

    Science.gov (United States)

    Shrestha, Bishnu K; Karki, Hari Sharan; Groth, Donald E; Jungkhun, Nootjarin; Ham, Jong Hyun

    2016-01-01

    Potential biological control agents for two major rice diseases, sheath blight and bacterial panicle blight, were isolated from rice plants in this study. Rice-associated bacteria (RABs) isolated from rice plants grown in the field were tested for their antagonistic activities against the rice pathogens, Rhizoctonia solani and Burkholderia glumae, which cause sheath blight and bacterial panicle blight, respectively. Twenty-nine RABs were initially screened based on their antagonistic activities against both R. solani and B. glumae. In follow-up retests, 26 RABs of the 29 RABs were confirmed to have antimicrobial activities, but the rest three RABs did not reproduce any observable antagonistic activity against R. solani or B. glumae. According to16S rDNA sequence identity, 12 of the 26 antagonistic RABs were closest to Bacillus amyloliquefaciens, while seven RABs were to B. methylotrophicus and B, subtilis, respectively. The 16S rDNA sequences of the three non-antagonistic RABs were closest to Lysinibacillus sphaericus (RAB1 and RAB12) and Lysinibacillus macroides (RAB5). The five selected RABs showing highest antimicrobial activities (RAB6, RAB9, RAB16, RAB17S, and RAB18) were closest to B. amyloliquefaciens in DNA sequence of 16S rDNA and gyrB, but to B. subtilis in that of recA. These RABs were observed to inhibit the sclerotial germination of R. solani on potato dextrose agar and the lesion development on detached rice leaves by artificial inoculation of R. solani. These antagonistic RABs also significantly suppressed the disease development of sheath blight and bacterial panicle blight in a field condition, suggesting that they can be potential biological control agents for these rice diseases. However, these antagonistic RABs showed diminished disease suppression activities in the repeated field trial conducted in the following year probably due to their reduced antagonistic activities to the pathogens during the long-term storage in -70C, suggesting that

  19. Research Progress on Northern Leaf Blight in Corn

    Institute of Scientific and Technical Information of China (English)

    ZHAO Yingnan; WANG Zhenhua

    2009-01-01

    The northern corn leaf blight is one of the most serious diseases in maize production. The research progress on etiology, generation law and control strategy, antigen identification, resistance mechanism and inheritance of this disease was discussed. And the research work which should be enhanced in China was pointed out, such as mechanism of resistance inheritance, developing function marker, gene mining, screening resistance resource and dominant physiological race in different areas.

  20. A Statistical Comparison of the Blossom Blight Forecasts of MARYBLYT and Cougarblight with Receiver Operating Characteristic Curve Analysis

    Science.gov (United States)

    Blossom blight forecasting is an important aspect of fire blight, caused by Erwinia amylovora, management for both apple and pear. A comparison of the forecast accuracy of two common fire blight forecasters, MARYBLYT and Cougarblight, was performed with receiver operating characteristic (ROC) curve ...

  1. Induced mutation for disease resistance in rice with special reference to blast, bacterial blight and tungro

    International Nuclear Information System (INIS)

    Rice varieties Ratna, Pusa 2-21, Vijaya and Pankaj have been treated with gamma rays, EMS or sodium azide to improve their resistance against blast, bacterial leaf blight or tungro virus. For blast and tungro, mutants with improved resistance were selected. Variation in reaction to bacterial leaf blight has been used in crossbreeding to accumulate genes for resistance. (author)

  2. Confirming QTLs and finding additional loci responsible for resistance to rice sheath blight disease

    Science.gov (United States)

    Rice sheath blight disease (Rhizoctonia solani AG1-1AKühn) is one of the most destructive rice diseases worldwide. Utilization of host resistance is the most economical and environmentally sound strategy in managing sheath blight (ShB). Ten ShB-QTLs were previously mapped in a LJRIL population using...

  3. Development and characterization of RiceCAP QTL mapping population for sheath blight resistance

    Science.gov (United States)

    RiceCAP is a USDA CSREES funded project that has as one of its main objectives developing genetic markers associated with sheath blight resistance. Sheath blight, caused by Rhizoctonia solani, is an important disease of rice in the southern US. Tolerance to the disease is quantitatively inherited an...

  4. Leaf Petiole and Stem Blight Disease of Sweet Potato Caused by Alternaria Bataticola in Uganda

    Science.gov (United States)

    Alternaria leaf petiole and stem blight is an important disease of sweet potato (Ipomoea batatus (L.) Lam.) in tropical and sub-tropical regions. In surveys conducted in Uganda from 2001 to 2003, disease incidence ranged from 0-49%. Symptoms of Alternaria leaf and stem blight disease consisted of sm...

  5. Candidate fire blight resistance genes in Malus identified with the use of genomic tools and approaches

    Science.gov (United States)

    The goal of this research is to utilize current advances in Rosaceae genomics to identify DNA markers for use in marker-assisted selection of durable resistance to fire blight. Candidate fire blight resistance genes were selected and ranked based upon differential expression after inoculation with ...

  6. Response of germinating barley seeds to Fusarium graminearum: The first molecular insight into Fusarium seedling blight

    DEFF Research Database (Denmark)

    Yang, Fen; Svensson, Birte; Finnie, Christine

    2011-01-01

    Fusarium seedling blight in cereals can result in significant reductions in plant establishment but has not received much attention. The disease often starts during seed germination due to sowing of the seeds infected by Fusarium spp. including Fusarium graminearum. In order to gain the first...... provides the first molecular insight into Fusarium seedling blight....

  7. Chestnut resistance to the blight disease: insights from transcriptome analysis

    Directory of Open Access Journals (Sweden)

    Barakat Abdelali

    2012-03-01

    Full Text Available Abstract Background A century ago, Chestnut Blight Disease (CBD devastated the American chestnut. Backcross breeding has been underway to introgress resistance from Chinese chestnut into surviving American chestnut genotypes. Development of genomic resources for the family Fagaceae, has focused in this project on Castanea mollissima Blume (Chinese chestnut and Castanea dentata (Marsh. Borkh (American chestnut to aid in the backcross breeding effort and in the eventual identification of blight resistance genes through genomic sequencing and map based cloning. A previous study reported partial characterization of the transcriptomes from these two species. Here, further analyses of a larger dataset and assemblies including both 454 and capillary sequences were performed and defense related genes with differential transcript abundance (GDTA in canker versus healthy stem tissues were identified. Results Over one and a half million cDNA reads were assembled into 34,800 transcript contigs from American chestnut and 48,335 transcript contigs from Chinese chestnut. Chestnut cDNA showed higher coding sequence similarity to genes in other woody plants than in herbaceous species. The number of genes tagged, the length of coding sequences, and the numbers of tagged members within gene families showed that the cDNA dataset provides a good resource for studying the American and Chinese chestnut transcriptomes. In silico analysis of transcript abundance identified hundreds of GDTA in canker versus healthy stem tissues. A significant number of additional DTA genes involved in the defense-response not reported in a previous study were identified here. These DTA genes belong to various pathways involving cell wall biosynthesis, reactive oxygen species (ROS, salicylic acid (SA, ethylene, jasmonic acid (JA, abscissic acid (ABA, and hormone signalling. DTA genes were also identified in the hypersensitive response and programmed cell death (PCD pathways. These DTA

  8. Controlling rice bacterial blight in Africa : needs and prospects

    OpenAIRE

    Verdier, Valérie; Cruz, C.V.; Leach, J. E.

    2012-01-01

    Rice cultivation has drastically increased in Africa over the last decade. During this time, the region has also seen a rise in the incidence of rice bacterial blight caused by the pathogen Xanthomonas oryzae pv. oryzae. The disease is expanding to new rice production areas and threatens food security in the region. Yield losses caused by X. oryzae pv. oryzae range from 20 to 30% and can be as high as 50% in some areas. Employing resistant cultivars is the most economical and effective way to...

  9. First Occurence of Fire Blight on Apricot (Prunus armeniaca) in Hungary

    OpenAIRE

    Végh, Anita; László PALKOVICS

    2013-01-01

    During July 2012, a severe unusual disease symptom was observed on young shoots on apricot (Prunus armeniaca 10/13 hybrid) in the city of Pomáz, near Budapest. The naturally infected shoots showed typical symptoms of fire blight including terminal shoots with brown to black necrotic lesions. Symptoms were the same as fire blight symptoms reported from other hosts and locations. The first occurrence of fire blight on an apricot tree in Europe was recorded in Czech Republic in 2011. Samples of ...

  10. Antifungal Action of Ginkgo biloba Outer Seedcoat on Rice Sheath blight

    OpenAIRE

    Oh, Tae-Seok; Koo, Han-Mo; Yoon, Hei-Ryeo; Jeong, Nam-Su; Kim, Yeong-Jin; Kim, Chang-Ho

    2015-01-01

    From study of antifungal actions on the rice sheath blight by using the extract of Ginkgo biloba outer seedcoats, we found that the extracts of Ginkgo biloba outer seedcoats of all treatment concentrations had inhibited the rice sheath blight. Among them, the most effective concentration was 250 mg/l at which the growth of microbe was 26 mm and even at the packaging test, when sprayed the G. biloba outer seedcoats at the level of 250 mg/l, the damage rate of the rice sheath blight was identif...

  11. Broad-spectrum antimicrobial activity of human intestinal defensin 5.

    OpenAIRE

    Porter, E M; van Dam, E; Valore, E V; Ganz, T

    1997-01-01

    Defensins are antibiotic peptides expressed in human and animal myeloid and epithelial cells. Due to the limited availability of natural peptides, the properties of human epithelial defensins have not been studied. We assayed the microbicidal activity of recombinant human intestinal defensin 5 (rHD-5) in the presence of salt (O to 150 mM NaCl) with varied pH (pH 5.5 to pH 8.5) and trypsin (25 and 250 microg/ml). rHD-5 exhibits microbicidal activity against Listeria monocytogenes, Escherichia ...

  12. Improved PCR Amplification of Broad Spectrum GC DNA Templates

    Science.gov (United States)

    Guido, Nicholas; Starostina, Elena; Leake, Devin; Saaem, Ishtiaq

    2016-01-01

    Many applications in molecular biology can benefit from improved PCR amplification of DNA segments containing a wide range of GC content. Conventional PCR amplification of DNA sequences with regions of GC less than 30%, or higher than 70%, is complex due to secondary structures that block the DNA polymerase as well as mispriming and mis-annealing of the DNA. This complexity will often generate incomplete or nonspecific products that hamper downstream applications. In this study, we address multiplexed PCR amplification of DNA segments containing a wide range of GC content. In order to mitigate amplification complications due to high or low GC regions, we tested a combination of different PCR cycling conditions and chemical additives. To assess the fate of specific oligonucleotide (oligo) species with varying GC content in a multiplexed PCR, we developed a novel method of sequence analysis. Here we show that subcycling during the amplification process significantly improved amplification of short template pools (~200 bp), particularly when the template contained a low percent of GC. Furthermore, the combination of subcycling and 7-deaza-dGTP achieved efficient amplification of short templates ranging from 10–90% GC composition. Moreover, we found that 7-deaza-dGTP improved the amplification of longer products (~1000 bp). These methods provide an updated approach for PCR amplification of DNA segments containing a broad range of GC content. PMID:27271574

  13. Broad Spectrum Photoelectrochemical Diodes for Solar Hydrogen Generation

    Energy Technology Data Exchange (ETDEWEB)

    Grimes, Craig A.

    2014-11-26

    Under program auspices we have investigated material chemistries suitable for the solar generation of hydrogen by water photoelectrolysis. We have built upon, and extended, our knowledge base on the synthesis and application of TiO2 nanotube arrays, a material architecture that appears ideal for water photoelectrolysis. To date we have optimized, refined, and greatly extended synthesis techniques suitable for achieving highly ordered TiO2 nanotube arrays of given length, wall thickness, pore diameter, and tube-to-tube spacing for use in water photoelectrolysis. We have built upon this knowledge based to achieve visible light responsive, photocorrosion stable n-type and p-type ternary oxide nanotube arrays for use in photoelectrochemical diodes.

  14. Isavuconazole: A New Broad-Spectrum Triazole Antifungal Agent.

    Science.gov (United States)

    Miceli, Marisa H; Kauffman, Carol A

    2015-11-15

    Isavuconazole is a new extended-spectrum triazole with activity against yeasts, molds, and dimorphic fungi. It is approved for the treatment of invasive aspergillosis and mucormycosis. Advantages of this triazole include the availability of a water-soluble intravenous formulation, excellent bioavailability of the oral formulation, and predictable pharmacokinetics in adults. A randomized, double-blind comparison clinical trial for treatment of invasive aspergillosis found that the efficacy of isavuconazole was noninferior to that of voriconazole. An open-label trial that studied primary as well as salvage therapy of invasive mucormycosis showed efficacy with isavuconazole that was similar to that reported for amphotericin B and posaconazole. In patients in these studies, as well as in normal volunteers, isavuconazole was well tolerated, appeared to have few serious adverse effects, and had fewer drug-drug interactions than those noted with voriconazole. As clinical experience increases, the role of this new triazole in the treatment of invasive fungal infections will be better defined. PMID:26179012

  15. Studies on broad spectrum corrosion resistant oxide coatings

    Indian Academy of Sciences (India)

    Someswar Datta

    2001-12-01

    The corrosion resistant oxide coatings, developed and applied by the conventional vitreous enamelling techniques, showed superior resistance to a range of mineral acids at various strengths and temperatures, alkaline solutions, boiling water and chrome plating solutions. These coatings possess considerable abrasion and impact resistance as well as high thermal shock resistance. The properties of the coating system have been studied in detail and found to be strongly dependent on composition and processing parameters. These coatings have been characterized by X-ray diffraction analysis and SEM studies. Some of the coating materials have been found to be biocompatible.

  16. Enhanced methanol production in plants provides broad spectrum insect resistance.

    Directory of Open Access Journals (Sweden)

    Sameer Dixit

    Full Text Available Plants naturally emit methanol as volatile organic compound. Methanol is toxic to insect pests; but the quantity produced by most of the plants is not enough to protect them against invading insect pests. In the present study, we demonstrated that the over-expression of pectin methylesterase, derived from Arabidopsis thaliana and Aspergillus niger, in transgenic tobacco plants enhances methanol production and resistance to polyphagous insect pests. Methanol content in the leaves of transgenic plants was measured using proton nuclear spectroscopy (1H NMR and spectra showed up to 16 fold higher methanol as compared to control wild type (WT plants. A maximum of 100 and 85% mortality in chewing insects Helicoverpa armigera and Spodoptera litura larvae was observed, respectively when fed on transgenic plants leaves. The surviving larvae showed less feeding, severe growth retardation and could not develop into pupae. In-planta bioassay on transgenic lines showed up to 99 and 75% reduction in the population multiplication of plant sap sucking pests Myzus persicae (aphid and Bemisia tabaci (whitefly, respectively. Most of the phenotypic characters of transgenic plants were similar to WT plants. Confocal microscopy showed no deformities in cellular integrity, structure and density of stomata and trichomes of transgenic plants compared to WT. Pollen germination and tube formation was also not affected in transgenic plants. Cell wall enzyme transcript levels were comparable with WT. This study demonstrated for the first time that methanol emission can be utilized for imparting broad range insect resistance in plants.

  17. Identification of Ebsulfur Analogues with Broad-Spectrum Antifungal Activity.

    Science.gov (United States)

    Ngo, Huy X; Shrestha, Sanjib K; Garneau-Tsodikova, Sylvie

    2016-07-19

    Invasive fungal infections are on the rise due to an increased population of critically ill patients as a result of HIV infections, chemotherapies, and organ transplantations. Current antifungal drugs are helpful, but are insufficient in addressing the problem of drug-resistant fungal infections. Thus, there is a growing need for novel antimycotics that are safe and effective. The ebselen scaffold has been evaluated in clinical trials and has been shown to be safe in humans. This makes ebselen an attractive scaffold for facile translation from bench to bedside. We recently reported a library of ebselen-inspired ebsulfur analogues with antibacterial properties, but their antifungal activity has not been characterized. In this study, we repurposed ebselen, ebsulfur, and 32 additional ebsulfur analogues as antifungal agents by evaluating their antifungal activity against a panel of 13 clinically relevant fungal strains. The effect of induction of reactive oxygen species (ROS) by three of these compounds was evaluated. Their hemolytic and cytotoxicity activities were also determined using mouse erythrocytes and mammalian cells. The MIC values of these compounds were found to be in the range of 0.02-12.5 μg mL(-1) against the fungal strains tested. Notably, yeast cells treated with our compounds showed an accumulation of ROS, which may further contribute to the growth-inhibitory effect against fungi. This study provides new lead compounds for the development of antimycotic agents. PMID:27334363

  18. Broad-Spectrum Behavior Therapy with Children: A Case Presentation

    Science.gov (United States)

    Keat, Donald B.

    1972-01-01

    The purpose of the case study was to report how a therapist can adapt a variety of behavioral techniques (both classical and operant conditioning) to meet the needs of emotionally disturbed elementary school aged children in one-to-one relationships. (Atuhor)

  19. Broad-spectrum biofilm inhibition by a secreted bacterial polysaccharide

    OpenAIRE

    Valle, Jaione; Da Re, Sandra; Henry, Nelly; Fontaine, Thierry; Balestrino, Damien; Latour-Lambert, Patricia; Ghigo, Jean-Marc

    2006-01-01

    The development of surface-attached biofilm bacterial communities is considered an important source of nosocomial infections. Recently, bacterial interference via signaling molecules and surface active compounds was shown to antagonize biofilm formation, suggesting that nonantibiotic molecules produced during competitive interactions between bacteria could be used for biofilm reduction. Hence, a better understanding of commensal/pathogen interactions within bacterial community could lead to a...

  20. Oxysterols: An emerging class of broad spectrum antiviral effectors.

    Science.gov (United States)

    Lembo, David; Cagno, Valeria; Civra, Andrea; Poli, Giuseppe

    2016-06-01

    Oxysterols are a family of cholesterol oxidation derivatives that contain an additional hydroxyl, epoxide or ketone group in the sterol nucleus and/or a hydroxyl group in the side chain. The majority of oxysterols in the blood are of endogenous origin, derived from cholesterol via either enzymatic or non-enzymatic mechanisms. A large number of reports demonstrate multiple physiological roles of specific oxysterols. One such role is the inhibition of viral replication. This biochemical/biological property was first characterised against a number of viruses endowed with an external lipid membrane (enveloped viruses), although antiviral activity has since been observed in relation to several non-enveloped viruses. In the present paper, we review the recent findings about the broad antiviral activity of oxysterols against enveloped and non-enveloped human viral pathogens, and provide an overview of their putative antiviral mechnism(s). PMID:27086126

  1. Antifungal Action of Ginkgo biloba Outer Seedcoat on Rice Sheath blight.

    Science.gov (United States)

    Oh, Tae-Seok; Koo, Han-Mo; Yoon, Hei-Ryeo; Jeong, Nam-Su; Kim, Yeong-Jin; Kim, Chang-Ho

    2015-03-01

    From study of antifungal actions on the rice sheath blight by using the extract of Ginkgo biloba outer seedcoats, we found that the extracts of Ginkgo biloba outer seedcoats of all treatment concentrations had inhibited the rice sheath blight. Among them, the most effective concentration was 250 mg/l at which the growth of microbe was 26 mm and even at the packaging test, when sprayed the G. biloba outer seedcoats at the level of 250 mg/l, the damage rate of the rice sheath blight was identified as 13%. As a result investigating the antifungal activity by separating polysaccharides from G. biloba outer seedcoats, it showed that the clear zone of 14 mm or more was formed at the concentration of 250 mg/l or higher. Based on these results, we concluded that the G. biloba outer seedcoat is a natural substance with the antifungal activity on the rice sheath blight. PMID:25774111

  2. Rootstock-regulated gene expression patterns associated with fire blight resistance in apple

    Science.gov (United States)

    Background: Desirable apple varieties are clonally propagated by grafting vegetative scions onto rootstocks. Rootstocks influence many phenotypic traits of the scion, including resistance to pathogens such as Erwinia amylovora, which causes fire blight, the most serious bacterial disease of apple....

  3. Antifungal Action of Ginkgo biloba Outer Seedcoat on Rice Sheath blight

    Directory of Open Access Journals (Sweden)

    Tae-Seok Oh

    2015-03-01

    Full Text Available From study of antifungal actions on the rice sheath blight by using the extract of Ginkgo biloba outer seedcoats, we found that the extracts of Ginkgo biloba outer seedcoats of all treatment concentrations had inhibited the rice sheath blight. Among them, the most effective concentration was 250 mg/l at which the growth of microbe was 26 mm and even at the packaging test, when sprayed the G. biloba outer seedcoats at the level of 250 mg/l, the damage rate of the rice sheath blight was identified as 13%. As a result investigating the antifungal activity by separating polysaccharides from G. biloba outer seedcoats, it showed that the clear zone of 14 mm or more was formed at the concentration of 250 mg/l or higher. Based on these results, we concluded that the G. biloba outer seedcoat is a natural substance with the antifungal activity on the rice sheath blight.

  4. Disease-reducing effect of Chromolaena odorata extract on sheath blight and other rice diseases.

    Science.gov (United States)

    Khoa, Nguyen Đac; Thuy, Phan Thi Hong; Thuy, Tran Thi Thu; Collinge, David B; Jørgensen, Hans Jørgen Lyngs

    2011-02-01

    Sheath blight caused by Rhizoctonia solani (teleomorph: Thanatephorus cucumeris) is a major cause of crop loss in intensive rice production systems. No economically viable control methods have been developed. We screened aqueous extracts of common herbal plants that could reduce sheath blight lesions and found that foliar spraying and seed soaking application of extracts of either fresh or dried leaves of Chromolaena odorata gave up to 68% reduction in sheath blight lesion lengths under controlled and semi-field conditions. The observed reductions were not dependent on growth conditions of C. odorata and rice cultivar. The effect was observed until 21 days after inoculation and was not dependent on microbial activity. Under semi-field conditions, extracts also reduced severity of other important rice diseases, i.e., blast (Pyricularia oryzae) using foliar spray (up to 45%), brown spot (Bipolaris oryzae) using seed treatment (up to 57%), and bacterial blight (Xanthomonas oryzae pv. oryzae) using both application methods (up to 50%). PMID:20839964

  5. Performance of resistance gene pyramids to races of rice bacterial blight in Zhejiang Province

    Institute of Scientific and Technical Information of China (English)

    ZHENGKangle; ZHUANGJieyun; WANGHanrong

    1998-01-01

    The effect of gene pyramiding on resistance to bacterial blight (BB) in rice was evahlated among the IR24-based near isogenic lines conraining single resistance gene and gene pyramids containing two, three or lour resistancegenes (see table).

  6. Late Budgets

    DEFF Research Database (Denmark)

    Andersen, Asger Lau; Lassen, David Dreyer; Nielsen, Lasse Holbøll Westh

    The budget forms the legal basis of government spending. If a budget is not in place at the beginning of the fiscal year, planning as well as current spending are jeopardized and government shutdown may result. This paper develops a continuous-time war-of-attrition model of budgeting in a...... presidential style-democracy to explain the duration of budget negotiations. We build our model around budget baselines as reference points for loss averse negotiators. We derive three testable hypotheses: there are more late budgets, and they are more late, when fiscal circumstances change; when such changes...... are negative rather than positive; and when there is divided government. We test the hypotheses of the model using a unique data set of late budgets for US state governments, based on dates of budget approval collected from news reports and a survey of state budget o¢ cers for the period 1988...

  7. Chestnut blight in Portugal : spread and populational structure of Cryphonectria parasitica

    OpenAIRE

    Bragança, Maria Helena Pires, 1964-

    2007-01-01

    Tese de doutoramento em Biologia (Microbiologia), apresentada à Universidade de Lisboa através da Faculdade de Ciências, 2008 Cryphonectria parasitica, the causal agent of chestnut blight, has been considered one of the most important mortality factors of the sweet chestnut Castanea sativa all over the world. To evaluate the current distribution of chestnut blight in Portugal, all chestnut growing regions across the entire country were screened, a total of 191 chestnut stands were surveyed...

  8. Biocontrol of sheath blight by Trichoderma asperellum in tropical lowland rice

    OpenAIRE

    de França, Suenny Kelly Santos; Cardoso, Aline Figueiredo; Lustosa, Denise Castro; Ramos, Edson Marcos Leal Soares; de Filippi, Marta Cristina Corsi; da Silva, Gisele Barata

    2015-01-01

    Crop damage by rice sheath blight, Rhizoctonia solani, can decrease rice yield by up to 45 %. The classical control method of rice sheath blight in the Amazon region is the application of fungicides. Therefore, we tested here the efficiency of a biocontrol agent, Trichoderma asperellum, and fungicides. Two experiments of rice cultivation were carried out with seven treatments: four isolates of T. asperellum, a mixture of the four isolates, the fungicide pencycuron, and the control. The first ...

  9. Preservation methods for isolates of ascochyta blight fungi

    Directory of Open Access Journals (Sweden)

    Joanna Marcinkowska

    2014-08-01

    Full Text Available Isolates of ascochyta blight fungi, two of Ascochyta pisi, four of Mycosphaerella pinodes and four of Phoma pinodella were stored: A - on slants under mineral oil, B - on CN's medium agar disks, and as conidial suspension: C - in glycerine, D · in water. Viability and pathogenicity of recovered cultures after each consecutive year were assesed from 1991 to 1999. The compared parameters were first of all strongly influenced by the preservation method, but fungus species and number of years had a minor importance. The best for longer storage was method "A" because after 9 years the isolates were viable, highly pathogenic, and cultures recovered from them were clean. Thc method "C'' is good for short keeping (2-3 years, as conidia in vials need only small space and gave clean cultures.

  10. Induced mutation for bacterial blight resistance in mulberry

    International Nuclear Information System (INIS)

    Buds of mulberry varieties Phai, Noi and SK2502 were irradiated by gamma radiation and then cultured on the Murashige and Skoog medium containing 1.0 mg/l of BA and Casein hydrolysate 1g/l. After proliferation of shoots, they were transferred to the rooting medium (MS + NAA 0.2 mg/l + IBA 0.2 mg/l). Plantlets of mulberry var. Noi were transplanted to soil in greenhouse for screening for bacterial blight disease resistance. All plants showed symptoms of disease. In vitro inoculation of the pathogen, Pseudomonas syringae p.v. mori, on plantlets of the mulberry var. Noi and Phai was conducted. All plants showed symptoms of the disease and died. In vitro screening will be continued with much larger populations in order to select the resistance traits. (author). 4 refs, 4 tabs

  11. The Identity of a Pea Blight Fungus in South Africa *

    Directory of Open Access Journals (Sweden)

    K. T. van Warmelo

    1966-12-01

    Full Text Available The perfect stage of Ascochyta pinodes (Berk. & Blox. Jones, a cause of pea blight in Natal, was compared with type material of  Sphaeria pinodes Berk, and Blox.,  Mycosphaerella pinodes (Berk. & Blox. Stone, and  Didymella pinodes (Berk. & Blox. Petrak and the development o f its ascocarps studied. Two types of ascocarp were found on the material of  Didymella pinodes, one perithecial and the other ascolocular in structure. The ascocarp of the South African fungus was typically ascolocular in development and construction and similar to that of other species of Mycosphaerella. These ascocarps were identical to those of  Sphaeria pinodes and Mycosphaerella pinodes and the ascolocular ascocarps of the  DidymeUa pinodes material. In development and morphology this fungus agrees more closely with the original generic concepts of the genus Mycosphaerella Joh. than with  Didymella Sacc. and should thus be named Mycosphaerella pinodes (Berk. & Blox. Stone.

  12. Functional analysis of OsPGIP1 in rice sheath blight resistance.

    Science.gov (United States)

    Wang, Rui; Lu, Liaoxun; Pan, Xuebiao; Hu, Zongliang; Ling, Fei; Yan, Yan; Liu, Yemao; Lin, Yongjun

    2015-01-01

    As one of the most devastating diseases of rice, sheath blight causes severe rice yield loss. However, little progress has been made in rice breeding for sheath blight resistance. It has been reported that polygalacturonase inhibiting proteins can inhibit the degradation of the plant cell wall by polygalacturonases from pathogens. Here, we prokaryotically expressed and purified OsPGIP1 protein, which was verified by Western blot analysis. Activity assay confirmed the inhibitory activity of OsPGIP1 against the PGase from Rhizoctonia solani. In addition, the location of OsPGIP1 was determined by subcellular localization. Subsequently, we overexpressed OsPGIP1 in Zhonghua 11 (Oryza sativa L. ssp. japonica), and applied PCR and Southern blot analysis to identify the positive T0 transgenic plants with single-copy insertions. Germination assay of the seeds from T1 transgenic plants was carried out to select homozygous OsPGIP1 transgenic lines, and the expression levels of OsPGIP1 in these lines were analyzed by quantitative real-time PCR. Field testing of R. solani inoculation showed that the sheath blight resistance of the transgenic rice was significantly improved. Furthermore, the levels of sheath blight resistance were in accordance with the expression levels of OsPGIP1 in the transgenic lines. Our results reveal the functions of OsPGIP1 and its resistance mechanism to rice sheath blight, which will facilitate rice breeding for sheath blight resistance. PMID:25488398

  13. Delphinella Shoot Blight on Abies lasiocarpa Provenances in Norway

    Directory of Open Access Journals (Sweden)

    Venche Talgø

    2015-12-01

    Full Text Available Delphinella shoot blight (Delphinella abietis attacks true firs (Abies spp. in Europe and North America. Especially subalpine fir (A. lasiocarpa, one of the main Christmas tree species in Norway, is prone to the disease. The fungus kills current year needles, and in severe cases entire shoots. Dead needles become covered with black fruiting bodies, both pycnidia and pseudothecia. Delphinella shoot blight has mainly been a problem in humid, coastal regions in the northwestern part of Southern Norway, but, probably due to higher precipitation in inland regions during recent years, heavy attacks were found in 2011 in a field trial with 76 provenances of subalpine fir in Southeastern Norway. However, the amount of precipitation seemed less important once the disease had established in the field. Significant differences in susceptibility between provenances were observed. In general, the more bluish the foliage was, the healthier the trees appeared. The analysis of provenance means indicated that, at least for the southern range, the disease ratings were correlated with foliage color. This study also includes isolation, identification, a pathogenicity test, a seed test and electron microscopy of the wax layer on the needles. The fungus was identified based on the morphology of spores and by sequencing the Internal Transcribed Spacer (ITS regions of the ribosomal DNA. Koch’s postulates were fulfilled. The fungus was found present on newly harvested seeds and may therefore spread via international seed trade. When comparing the wax layers on green and blue needles, those of the latter were significantly thicker, a factor that may be involved in disease resistance.

  14. Cultural Heritage in the Gulf: Blight or Blessing?

    Directory of Open Access Journals (Sweden)

    Djamel Boussaa

    2014-12-01

    Full Text Available In the Gulf and after gaining independence in the 1960s and 1970s many cities witnessed a staggering rapid urban growth. The urban centers, which formed the central parts of these cities, underwent continuous pressures of destruction and redevelopment. A large number of these centers have been often demolished and replaced by alien imported high-rise buildings. The urban cores which escaped complete demolition have survived as isolated pockets in the middle of hybrid environments. This dilemma raises important questions; is this surviving cultural heritage blight or blessing? Is it "blight" and obstacle that stifles our cities from moving forward to aspire for a bright and prosperous future, or is it "blessing" an asset that can form a major catalyst to promote our cities while maintaining strong roots with their past? Accordingly, what should be the future of these surviving historic centers? Will they be demolished to pave way for more ambitious growth or can they be conserved and sustained for present and future generations? Will the historic city, the heart of urban life and the main protector of our cities identities, survive and continue to be places for living within the emerging global cities of today and tomorrow? This paper attempts to highlight the importance of dealing with the conservation and development issue, by raising and discussing the following question: How can our cultural heritage be a setting of appropriate conservation and development in the emerging global environments? In order to discuss this issue, three historic cities from the Gulf; Old Dubai in UAE, Old Jeddah in Saudi Arabia and Old Doha in Qatar will form the setting of this research.

  15. Antibiosis Contributes to Biological Control of Fire Blight by Pantoea agglomerans Strain Eh252 in Orchards.

    Science.gov (United States)

    Stockwell, V O; Johnson, K B; Sugar, D; Loper, J E

    2002-11-01

    ABSTRACT Fire blight, caused by Erwinia amylovora, is the most serious bacterial disease of pear and apple trees. Biological control with strains of Pantoea agglomerans (syn. Erwinia herbicola) may provide an effective disease management strategy for fire blight. Most strains of P. agglomerans evaluated for suppression of fire blight produce compounds that inhibit the growth of E. amylovora in culture. The role of these inhibitory compounds in fire blight suppression in orchard environments has not been studied. In seven field trials in Oregon, we compared the population dynamics and disease suppression with P. agglomerans Eh252, a strain that produces a single antibiotic, with its near-isogenic antibiotic-deficient derivative, strain 10:12. Water or suspensions of Eh252 or 10:12 (1 x 10(8) CFU/ml) were applied at 30 and 70% bloom to pear or apple trees. Aqueous suspensions of freeze-dried cells of E. amylovora (3 x 10(5) CFU/ml) were applied at full bloom. Additional trees were treated with streptomycin or oxytetracycline at 30 and 70% bloom and in some experiments, 1 day after application of the pathogen. Population sizes of Eh252 or 10:12 on pear blossoms were estimated by spreading dilutions of blossom washes on culture media. Average population sizes of Eh252 and 10:12 on blossoms ranged from 10(5) to 10(7) CFU, and in five of six trials, the relative area under the population curve of Eh252 was not significantly different than that of its derivative 10:12. Both Eh252 and 10:12 reduced the growth of the pathogen on blossoms compared with inoculated water-treated controls. Eh252 significantly decreased the incidence of fire blight in six of seven field trials compared with the incidence on water-treated trees, and 10:12 similarly reduced the incidence of fire blight in four of seven trials. In three of seven field trials, trees treated with Eh252 had a significantly lower incidence of fire blight compared with trees treated 3 with 10:12. Overall,3 Eh252 reduced

  16. Erwinia amylovora pyrC mutant causes fire blight despite pyrimidine auxotrophy.

    Science.gov (United States)

    Ramos, L S; Sinn, J P; Lehman, B L; Pfeufer, E E; Peter, K A; McNellis, T W

    2015-06-01

    Erwinia amylovora bacteria cause fire blight disease, which affects apple and pear production worldwide. The Erw. amylovora pyrC gene encodes a predicted dihydroorotase enzyme involved in pyrimidine biosynthesis. Here, we discovered that the Erw. amylovora pyrC244::Tn5 mutant was a uracil auxotroph. Unexpectedly, the Erw. amylovora pyrC244::Tn5 mutant grew as well as the wild-type in detached immature apple and pear fruits. Fire blight symptoms caused by the pyrC244::Tn5 mutant in immature apple and pear fruits were attenuated compared to those caused by the wild-type. The pyrC244::Tn5 mutant also caused severe fire blight symptoms in apple tree shoots. A plasmid-borne copy of the wild-type pyrC gene restored prototrophy and symptom induction in apple and pear fruit to the pyrC244::Tn5 mutant. These results suggest that Erw. amylovora can obtain sufficient pyrimidine from the host to support bacterial growth and fire blight disease development, although de novo pyrimidine synthesis by Erw. amylovora is required for full symptom development in fruits. Significance and impact of the study: This study provides information about the fire blight host-pathogen interaction. Although the Erwinia amylovora pyrC mutant was strictly auxotrophic for pyrimidine, it grew as well as the wild-type in immature pear and apple fruits and caused severe fire blight disease in apple trees. This suggests that Erw. amylovora can obtain sufficient pyrimidines from host tissue to support growth and fire blight disease development. This situation contrasts with findings in some human bacterial pathogens, which require de novo pyrimidine synthesis for growth in host blood, for example. PMID:25789570

  17. First report of bacterial leaf blight on mustard greens (Brassica juncea) caused by pseudomonas cannabina pv. alisalensis in Mississippi

    Science.gov (United States)

    In 2010, a brassica leafy greens grower in Sunflower County, Mississippi, observed scattered outbreaks of a leaf blight disease on mustard greens (Brassica juncea) in a 180-hectare field. A severe outbreak of leaf blight occurred on mustard greens and turnip greens (Brassica rapa) in the same field...

  18. USING FUNCTIONAL AND APPLIED GENOMICS TO IDENTIFY GENES THAT CONFER EITHER RESISTANCE OR SUSCEPTIBILITY TO FIRE BLIGHT

    Science.gov (United States)

    Fire blight, caused by the bacterium Erwinia amylovora, is a destructive disease of apple, pear and other plants of the Rosaceae. The goal of this project is to use functional genomics to characterize the response of apple to fire blight disease and, thereby, identify new opportunities for improvin...

  19. Screening Rice Cultivars for Resistance to Bacterial Leaf Blight.

    Science.gov (United States)

    Fred, Agaba Kayihura; Kiswara, Gilang; Yi, Gihwan; Kim, Kyung-Min

    2016-05-28

    Bacterial leaf blight (BLB) caused by Xanthomonas oryzae pv. oryzae (Xoo) is one of the most serious threats to rice production. In this study, screening of rice for resistance to BLB was carried out at two different times and locations; that is, in a greenhouse during winter and in an open field during summer. The pathogenicity of Xoo race K1 was tested on 32 Korean rice cultivars. Inoculation was conducted at the maximum tillering stage, and the lesion length was measured after 14 days of inoculation. Five cultivars, Hanareum, Namcheon, Samgdeok, Samgang, and Yangjo, were found to be resistant in both the greenhouse and open-field screenings. Expression of the plant defense-related genes JAmyb, OsNPR1, OsPR1a, OsWRKY45, and OsPR10b was observed in resistant and susceptible cultivars by qRT-PCR. Among the five genes tested, only OsPR10b showed coherent expression with the phenotypes. Screening of resistance to Xoo in rice was more accurate when conducted in open fields in the summer cultivation period than in greenhouses in winter. The expression of plant defenserelated genes after bacterial inoculation could give another perspective in elucidating defense mechanisms by using both resistant and susceptible individuals. PMID:26869604

  20. An Update on Genetic Resistance of Chickpea to Ascochyta Blight

    Directory of Open Access Journals (Sweden)

    Mamta Sharma

    2016-03-01

    Full Text Available Ascochyta blight (AB caused by Ascochyta rabiei (Pass. Labr. is an important and widespread disease of chickpea (Cicer arietinum L. worldwide. The disease is particularly severe under cool and humid weather conditions. Breeding for host resistance is an efficient means to combat this disease. In this paper, attempts have been made to summarize the progress made in identifying resistance sources, genetics and breeding for resistance, and genetic variation among the pathogen population. The search for resistance to AB in chickpea germplasm, breeding lines and land races using various screening methods has been updated. Importance of the genotype × environment (GE interaction in elucidating the aggressiveness among isolates from different locations and the identification of pathotypes and stable sources of resistance have also been discussed. Current and modern breeding programs for AB resistance based on crossing resistant/multiple resistant and high-yielding cultivars, stability of the breeding lines through multi-location testing and molecular marker-assisted selection method have been discussed. Gene pyramiding and the use of resistant genes present in wild relatives can be useful methods in the future. Identification of additional sources of resistance genes, good characterization of the host–pathogen system, and identification of molecular markers linked to resistance genes are suggested as the key areas for future study.

  1. Efficacy of fungicides on the progress of early blight and yield of potato in Cameroon

    Directory of Open Access Journals (Sweden)

    Fontera, DA.

    1992-01-01

    Full Text Available Five fungicides were evaluated during the 1990 and 1991 growing seasons in two locations in Cameroon for efficacy on the progress of early blight and yield of potato. Disease-progress curves fitted the logistic transformation better than the Gompertz. Fungicidal treatments reduced the rate of early blight progress and area under disease-progress curve (AUDPC. Early blight was more severe in the 1991 season and yields recorded in this season were lower than those in 1990. In both seasons, high yields were obtained in plots receiving six sprays maneb or mancozeb. Two sprays of Ridomil plus (12 % metalaxyl + 60 % cuprous oxide and six of cupric hydroxide also produced appreciable yields, while fosetyl-AI (three sprays provided the least yield increase. Yield losses in non-sprayed plots were estimated at 15.7-53.6 %. Yields were negatively correlated to AUDPC.

  2. Zinc-deficient sprouting blight potatoes and their possible relation with neural tube defects.

    Science.gov (United States)

    Ulman, Cevval; Taneli, Fatma; Oksel, Figen; Hakerlerler, Huseyin

    2005-01-01

    Maternal nutritional zinc deficiency is blamed in the pathogenesis of neural tube defects. In animal and plant domains zinc is required for growth and development. The objective of the present study was to show that sprouting blighted potato tuber is zinc deficient. In five potato varieties, zinc was measured by atomic absorption spectrophotometry in wet-ashed paired slices of edible potato tuber and in its peel, in blighted potato tuber and in its sprout. Zinc contents were measured as the mean (+/- SEM) and the following values were found, 0.388 +/- 0.036, 0.623 +/- 0.059, 0.550 +/- 0.030 and 1.089 +/- 0.181 mg per 100 g wet weight, respectively. In conclusion, we believe that long-term consumption of zinc-depleted, blight potato tuber by pregnant woman could be potentially teratogenic with the consequent birth of a baby with neural tube defects. PMID:15376231

  3. Genetics of alternaria leaf blight resistance in Indian mustard [Brassica Juncea (L. Czern & Coss.

    Directory of Open Access Journals (Sweden)

    R. K. Chaurasia and Ram Bhajan

    2015-06-01

    Full Text Available Inheritance of Alternaria leaf blight disease in Indian mustard (Brassica juncea L. Czern & Coss was carried-out using generation mean analysis. Results based on generation mean analysis of per cent disease index (PDI showed significant estimates of additive [d] and dominance [h] effects as well as all the three types of epistasis in all the three crosses. The opposite signs of [h] and [l] indicated that duplicate epistasis was operative in the inheritance of Alternaria leaf blight in the material studied.

  4. Rootstock-regulated gene expression patterns associated with fire blight resistance in apple

    Directory of Open Access Journals (Sweden)

    Jensen Philip J

    2012-01-01

    Full Text Available Abstract Background Desirable apple varieties are clonally propagated by grafting vegetative scions onto rootstocks. Rootstocks influence many phenotypic traits of the scion, including resistance to pathogens such as Erwinia amylovora, which causes fire blight, the most serious bacterial disease of apple. The purpose of the present study was to quantify rootstock-mediated differences in scion fire blight susceptibility and to identify transcripts in the scion whose expression levels correlated with this response. Results Rootstock influence on scion fire blight resistance was quantified by inoculating three-year old, orchard-grown apple trees, consisting of 'Gala' scions grafted to a range of rootstocks, with E. amylovora. Disease severity was measured by the extent of shoot necrosis over time. 'Gala' scions grafted to G.30 or MM.111 rootstocks showed the lowest rates of necrosis, while 'Gala' on M.27 and B.9 showed the highest rates of necrosis. 'Gala' scions on M.7, S.4 or M.9F56 had intermediate necrosis rates. Using an apple DNA microarray representing 55,230 unique transcripts, gene expression patterns were compared in healthy, un-inoculated, greenhouse-grown 'Gala' scions on the same series of rootstocks. We identified 690 transcripts whose steady-state expression levels correlated with the degree of fire blight susceptibility of the scion/rootstock combinations. Transcripts known to be differentially expressed during E. amylovora infection were disproportionately represented among these transcripts. A second-generation apple microarray representing 26,000 transcripts was developed and was used to test these correlations in an orchard-grown population of trees segregating for fire blight resistance. Of the 690 transcripts originally identified using the first-generation array, 39 had expression levels that correlated with fire blight resistance in the breeding population. Conclusions Rootstocks had significant effects on the fire blight

  5. SURVEY OF TURCICUM LEAF BLIGHT OF MAIZE IN MAJOR MAIZE GROWING AREAS OF ANDHRA PRADESH

    OpenAIRE

    T. Rajeshwar Reddy; P. Narayan Reddy; R. Ranga Reddy

    2013-01-01

    Northern corn leaf blight or turcicum leaf blight caused by Exserohilum turcicum (Pass.) Leonard and Suggs is one of the important diseases affecting photosynthesis with severe reduction in grain yield to an extent of 28 to 91%. Disease symptoms first appear on the leaves at any stage of plant growth, but usually at or after anthesis. The studies on survey reveals that high intensity of the disease was noted in the district where mean maximum temperature was below 320C and relative humidity w...

  6. Survival of Fusarium graminearum, the causal agent of Fusarium head blight. A review

    OpenAIRE

    Leplat, Johann; Friberg, Hanna; Abid, Muhammad; Steinberg, Christian

    2013-01-01

    Wheat is one of the most cultivated crops worldwide. In 2010, 20 % of wheat and durum wheat were cultivated in Europe, 17 % in China and 9 % in Russia and in North America. Wheat yield can be highly decreased by several factors. In particular Fusarium graminearum Schwabe is a worldwide fungal pest impacting wheat production. F. graminearum is the causal agent of Fusarium head blight, root and stem-base rot of cereals. Losses caused by Fusarium head blight in Northern and Central America from ...

  7. Development of genetic and molecular toolboxes to control both rice blast and sheath blight

    Science.gov (United States)

    Rice blast and sheath blight diseases are the two major constraints for stable rice production in the Southern USA. New genetic and molecular tool boxes have been developed at the USDA-ARS Dale Bumpers National Rice Research Center. Resistance (major and minor) genes from rice have been identified...

  8. Action and reaction of host and pathogen during Fusarium head blight disease

    DEFF Research Database (Denmark)

    Walter, Stephanie; Nicholson, Paul; Doohan, Fiona M

    2010-01-01

    The Fusarium species Fusarium graminearum and Fusarium culmorum, Which are responsible for Fusarium head blight (FHB) disease, reduced world-wide cereal crop yield and, as a consequence of their mycotoxin production in cereal grain, impact on both human and animal health. Their study is greatly......-pathogen interactions will be instrumental in designing new efficient strategies for the control of FHB disease....

  9. Introgression and genetic characterization of alien Fusarium head blight resistance in wheat

    Science.gov (United States)

    Alien species are an important source of genetic variability in wheat (Triticum spp.) and carry genes for resistance to numerous pathogens, including Fusarium graminearum Schwabe, the causal agent of Fusarium head blight (FHB). The goal of this project was to develop breeder-friendly, FHB-resistant ...

  10. Elevated [CO2] compromises both Type I and Type II wheat resistance to Fusarium head blight

    Science.gov (United States)

    Fusarium head blight (FHB) is one of the world’s most devastating wheat diseases, and results in significant yield loss and contamination of grain with harmful mycotoxins called trichothecenes. Despite emerging risks of increased mycotoxin contamination in food and feed associated with climate chang...

  11. Stability of Sweet Potato Cultivars to Alternaria Leaf and Stem Blight Disease

    Science.gov (United States)

    Alternaria leaf petiole and stem blight is an economically important disease of sweet potato (Ipomoea batatus L) in tropical and sub-tropical environments. Published research on cultivar resistance to the sweet potato disease is limited. To evaluate cultivar reaction and stability to the disease, mu...

  12. Genetic diversity of rice sheath blight isolates (Rhizoctonia solani AG-1 IA) from different rice cultivars

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Rhizoctonia solani AG 1 IA, the non specific, soil borne, and plant casual agent of rice sheath blight, occurring world widely in rice fields, has become a major disease to rice. In this study,relationships among R. solani AG 1 IA isolates, collected from different rice cultivars were reported.

  13. Neofusicoccum ribis Associated with Leaf Blight on Rubber (Hevea brasiliensis in Peninsular Malaysia

    Directory of Open Access Journals (Sweden)

    A. I. C. Nyaka Ngobisa

    2013-03-01

    Full Text Available Hevea brasiliensis is a natural source of rubber and an important plantation tree species in Malaysia. Leaf blight disease caused by Fusicoccum substantially reduces the growth and performance of H. brasiliensis. The aim of this study was to use a combination of both morphological characteristics and molecular data to clarify the taxonomic position of the fungus associated with leaf blight disease. Fusicoccum species were isolated from infected leaves collected from plantations at 3 widely separated locations – Selangor, Perak, and Johor states – in Peninsular Malaysia in 2010. All the isolates were identified according to their conidial patterns and DNA sequences generated from internal transcribed spacers (ITS1 and ITS2, the 5.8S rRNA, and an unknown locus (BotF15 containing microsatellite repeats. Based on taxonomic and sequence data, Neofusicoccum ribis was identified as the main cause of leaf blight disease in H. brasiliensis in commercial plantations in Malaysia. A pathogenicity trial on detached leaves further confirmed that N. ribis causes leaf blight disease. N. ribis is an important leaf pathogen, and its detection in Malaysia has important implications for future planting of H. brasiliensis.

  14. Development of co-cultivated mixtures of antagonists active against Fusarium head blight of wheat

    Science.gov (United States)

    Multistrain mixtures of biocontrol agents can foster greater and more consistent reductions of plant disease. Several different mixtures of Agricultural Research Service/Ohio State University-discovered antagonists reduced Fusarium head blight (FHB) in field studies. Microbial mixtures commonly ar...

  15. Efficacy of different fungicides against Rhizoctonia brown patch and Pythium blight on turfgrass in Italy.

    Science.gov (United States)

    Mocioni, M; Titone, P; Garibaldi, A; Gullino, M L

    2003-01-01

    Brown patch, incited by Rhizoctonia solani Kuhn, and Pythium blight, caused by Pythium spp. are two of the diseases most frequently observed on turfgrass in high maintenance stands, as on golf courses. In such conditions the control strategies, based on chemicals, are particularly difficult due to the scarcity of fungicides registered for turf in Italy. The results obtained in experimental trials carried out to evaluate the efficacy of chemical and biological products against brown patch and Pythium blight are reported. On mature turfgrass, maintained under fairway conditions, azoxystrobin, and trifoxystrobin, not yet registered on turf, were very effective against brown patch. Tebuconazole, applied in three different formulations, was very effective against R. solani, while Trichoderma spp. and azadiractine did not control the pathogen. In greenhouse conditions on Agrostis stolonifera, in the presence of severe disease incidence, due to artificial inoculation, benalaxyl-M satisfactorily controlled Pythium blight; Trichoderma spp. as well as a commercial formulation of T. harzianum, applied one week before the inoculation, were not effective. Among the fungicides not yet registered for use on turfgrass in Italy, metalaxyl-M + mancozeb was effective against Pythium blight. PMID:15151284

  16. Relative Susceptibility of Quince, Pear, and Apple Cultivars to Fire Blight Following Greenhouse Inoculation

    Science.gov (United States)

    Fire blight caused by Erwinia amylovora (EA) is one of the most serious diseases of plants in the family Rosaceae, and Quince (Cydonia oblonga Mill.) is considered one of the most susceptible host genera. Apple (Malus sp.) and pear (Pyrus sp.) cultivars ranging from most susceptible to most resistan...

  17. Current progress on genetic interactions of rice with rice blast and sheath blight fungi

    Science.gov (United States)

    Analysis of genetic interactions between rice and its pathogenic fungi Magnaporthe oryzae and Rhizoctonia solani should lead to a better understanding of molecular mechanisms of host resistance, and the improvement of strategies to manage rice blast and sheath blight diseases. Presently dozens of ri...

  18. Development of a pathology toolbox for genetic and breeding for resistance to rice sheath blight disease

    Science.gov (United States)

    Accurate evaluation of the host response of rice plants to sheath blight disease, Rhizoctonia solani, is important for genetic studies and breeding for improved resistance. In the present study, a method to evaluate the response of a recombinant inbred mapping population, consisting of 574 F10 indiv...

  19. Analysis of rice PDR-like ABC transporter genes in sheath blight resistance

    Science.gov (United States)

    Sheath blight caused by Rhizoctonia solani is one of the most damaging diseases of rice worldwide. To understand the molecular mechanism of resistance, we identified 450 differentially expressed genes in a resistant rice cultivar Jasmine 85 after R. solani infection with a combination of DNA microar...

  20. Biocontrol-based sheath blight management to reduce fungicide use on rice

    Science.gov (United States)

    Sheath blight (ShB) caused by Rhizoctonia solani is one of the most important rice diseases in Texas, Arkansas, Mississippi, and other southern states. The lack of complete ShB resistance in the most commonly planted varieties and the severity of this disease results in southern U.S. rice farmers ap...

  1. Neofusicoccum ribis Associated with Leaf Blight on Rubber (Hevea brasiliensis in Peninsular Malaysia

    Directory of Open Access Journals (Sweden)

    A. I. C. Nyaka Ngobisa

    2013-03-01

    Full Text Available Hevea brasiliensis is a natural source of rubber and an important plantation tree species in Malaysia. Leaf blight disease caused by Fusicoccum substantially reduces the growth and performance of H. brasiliensis. The aim of this study was to use a combination of both morphological characteristics and molecular data to clarify the taxonomic position of the fungus associated with leaf blight disease. Fusicoccum species were isolated from infected leaves collected from plantations at 3 widely separated locations - Selangor, Perak, and Johor states - in Peninsular Malaysia in 2010. All the isolates were identified according to their conidial patterns and DNA sequences generated from internal transcribed spacers (ITS1 and ITS2, the 5.8S rRNA, and an unknown locus (BotF15 containing microsatellite repeats. Based on taxonomic and sequence data, Neofusicoccum ribis was identified as the main cause of leaf blight disease in H. brasiliensis in commercial plantations in Malaysia. A pathogenicity trial on detached leaves further confirmed that N. ribis causes leaf blight disease. N. ribis is an important leaf pathogen, and its detection in Malaysia has important implications for future planting of H. brasiliensis.

  2. Validation of Fusarium head blight resistance QTL using the NC-Neuse / Bess doubled haploid population

    Science.gov (United States)

    Fusarium Head Blight (FHB) is one of the most damaging diseases of wheat. It lowers the grain yield and quality, and contaminates grain with the mycotoxin deoxynivalenol (DON). Genetic resistance is a critical control measure and breeding objective. Many studies have focused on the genetic basis of ...

  3. Management of Fusarium Head Blight of Wheat and Deoxynivalenol Accumulation Using Antagonistic Microorganisms

    Directory of Open Access Journals (Sweden)

    G.M. Riungu

    2008-01-01

    Full Text Available Laboratory and green house studies were conducted at the Faculty of Agriculture, University of Nairobi, to evaluate the efficacy of Epicoccum sp., Alternaria sp., Trichoderma sp. and Bacillus sp. in control of Fusarium head blight of wheat caused by F. graminearum. Fungicides folicur® and copper oxychloride were used as standard checks. Laboratory assay was carried out by paired cultures and antagonism was measured as reduction in pathogen colony diameter. Green house experiments involved dual inoculation of pathogen and antagonist onto wheat ears and head blight severity and grain yield determined. Doxynivalenol content in the resulting grain was determined by competitive direct ELISA. The antagonists and fungicides significantly reduced the growth of Fusarium graminearum colonies in culture. Folicur® and copper oxychloride completely inhibited the growth of the pathogen while Trichoderma sp. showed 64% colony growth reduction. However, the antagonists showed limited reduction in head blight severity in green house trials. Trichoderma sp. reduced head blight severity by 18% while folicur® reduced the disease by 28%. All the antagonists had little or no significant effect on grain yield. Only folicur®, copper oxychloride and Alternaria sp. reduced DON in grain by 76 to 93%. Obtained results indicate that microbial antagonists may offer potential benefit in FHB management and screening of more antagonists both under controlled and field conditions is necessary.

  4. Evaluation of Commercial Watermelon Rootstocks for Tolerance to Phytophthora Blight and Watermelon Vine Decline

    Science.gov (United States)

    Phytophthora blight and fruit rot caused by Phytophthora capsici, and watermelon vine decline (WVD) caused by Squash vein yellowing virus (SqVYV), are two important and emerging diseases of watermelons (Citrullus lanatus). Recently, the practice of grafting seedless watermelons (triploids) onto roo...

  5. Identification of markers associated with bacterial blight resistance loci in cowpea (Vigna unguiculata (L.) Walp.)

    NARCIS (Netherlands)

    Agbicodo, A.C.M.E.; Fatokun, C.A.; Bandyopadhyay, R.; Wydra, K.; Diop, N.N.; Muchero, W.; Ehlers, J.D.; Roberts, P.A.; Close, T.J.; Visser, R.G.F.; Linden, van der C.G.

    2010-01-01

    Cowpea bacterial blight (CoBB), caused by Xanthomonas axonopodis pv. vignicola (Xav), is a worldwide major disease of cowpea [Vigna unguiculata (L.) Walp.]. Among different strategies to control the disease including cultural practices, intercropping, application of chemicals, and sowing pathogen-fr

  6. DGE-1, a durum alien disomic addition line with resistance to Fusarium head blight

    Science.gov (United States)

    Scab or Fusarium head blight (FHB), caused by the fungus Fusarium graminearum Schwabe., is a serious disease of durum wheat (Triticum turgidum L., 2n = 4x = 28; AABB genomes) and current durum cultivars have almost no FHB resistance. Because diploid wheatgrass, Lophopyrum elongatum (2n = 2x = 14; EE...

  7. Pantoea applied genomics to understand and improve biocontrol activity against fire blight

    Science.gov (United States)

    Pantoea agglomerans and P. vagans (ex. Erwinia herbicola) are common epiphytes of pome fruit flowers and three strains (E325, P10c, C9-1) have been commercially developed as effective biocontrol products for managing fire blight (Erwinia amylovora). Antibiotics as a standard, reliable chemical optio...

  8. Potential impact of a hybrid leaf blight disease that infects both carrot and potato

    Science.gov (United States)

    Alternaria dauci and Alternaria solani are two forms of necrotrophic fungi. A. dauci targets carrot crops, while A. solani mainly targets potato. Both species of Alternaria have been able to produce blight on their respective target plants. Recently, an A. dauci hybrid has appeared that is able to i...

  9. Complete Genome Sequence for the Fusarium Head Blight Antagonist Bacillus amyloliquefaciens Strain TrigoCor 1448

    OpenAIRE

    Nelson, Beth A.; Ramaiya, Preethi; Lopez de Leon, Alfredo; Kumar, Ravi; Crinklaw, Austin; Jolkovsky, Eliana; Crane, Julia M.; Bergstrom, Gary C; Rey, Michael W.

    2014-01-01

    We present the complete genome sequence for Bacillus amyloliquefaciens TrigoCor 1448 (ATCC 202152), a bacterial biological control agent for Fusarium head blight in wheat. We compare it to its closest relative, B. amyloliquefaciens strain AS43.3.

  10. Field Evaluation of Apple Rootstocks for Orchard Performance and Fire Blight Resistance

    Science.gov (United States)

    In 2002, apple rootstock trials using three scion cultivars were established at Geneva, NY to evaluate 64 apple (Malus X domestica) rootstocks for horticultural performance and fire blight resistance. Field trials compared several elite Geneva® apple rootstocks, which were bred for tolerance to fir...

  11. Fire blight incidence on Malus sieversii grown in New York and Minnesota

    Science.gov (United States)

    Malus sieversii, a wild apple species native to Central Asia, has been recognized as the major progenitor of the domestic apple. This investigation summarizes the natural infection by Erwinia amylovora (fire blight) on 2590 M. sieversii seedlings grown as own-rooted trees. At a USDA orchard in Gen...

  12. DIFFERENTIAL SUSCEPTIBILITY TO FIRE BLIGHT IN COMMERCIAL AND EXPERIMENTAL APPLE ROOTSTOCK CULTIVARS

    Science.gov (United States)

    The Geneva rootstock breeding program has developed several new rootstocks that exhibit disease resistance to Erwinia amylovora. Utilization of disease resistant apple rootstocks increases the survivability of young trees infected by fire blight. The goal of this experiment was to further investigat...

  13. Fusarium spp. associated with head blight of wheat in South Africa

    Science.gov (United States)

    Fusarium head blight (FHB) of wheat is caused by numerous Fusarium species, including trichothecene-producers. In South Africa, FHB is mostly associated with irrigated wheat rotated with maize. Twenty symptomatic wheat heads were collected from four cultivars each in irrigated fields in the Northern...

  14. Population genomics of Fusarium graminearum head blight pathogens in North America

    Science.gov (United States)

    In this study we utilized comparative genomics to identify candidate adaptive alleles in the fungus Fusarium graminearum, the primary pathogen of Fusarium head blight (FHB) in cereal crops. Recent epidemics of FHB have been economically devastating to agriculture, as F. graminearum reduces cereal yi...

  15. Multiple minor QTLs are responsible for Fusarium head blight resistance in Chinese wheat landrace Haiyanzhong

    Science.gov (United States)

    Fusarium head blight (FHB), caused by Fusarium graminearum Schwabe, is a devastatingve disease in wheat (Triticum aestivum L.). Use of host resistance is one of the most effective strategies to minimize the disease damage. Haiyanzhong (HYZ) is a Chinese wheat landrace that shows a high level of resi...

  16. Introduction of Several Methods to Control Fusarium Head Blight(FHB)

    Institute of Scientific and Technical Information of China (English)

    张荣; 张敏

    2008-01-01

    Abstract:Fusariam head blight(FHB)is a worldwide destructive disease of wheat in the warm,semi-humid or humid regions,especially serious in China.The disease not only causes significant losses in yield and re duces grain quanlity,but also induces toxin to contaminated seeds,which is harmful to the healthy of human and livestocks,So it is important to control it.There are several methods to control Fusarium head blight (FHB).Such as using Crop rotation,Soil cultivation and Fertiliser,biological control,Fungicides control, transgenes,resistance to control Fusarium head blight(FHB).All of these methods gain some effect,but also exist their deficiency.Sometimes crop rotation had no significant effect on DON contamination of wheat grain,subsequent reductions in DON contamination were inconsistent when using Soil cultivation and Fer tiliser,Unfortunately,under field conditions,the biological control achieved has been shown to be variable and in some tests has failed to give any control,The use of fungicides,however,have not been consistently effective in controlling FHB and in reducing DON formation,transgene-silencing at different generations is a problem to use transgenes,Information on location of QTL for FHB resistance should improve dramatically in the near future on resistance to control Fusarium head blight(FHB).Therefore,it is pressing to improve control methods,especially to DON.

  17. STRUCTURAL AND FUNCTIONAL STUDIES OF TRICHOTHECENE BIOSYNTHETIC ENZYMES: A NOVEL APPROACH TO COMBATING FUSARIUM HEAD BLIGHT

    Science.gov (United States)

    Fusarium Head Blight (FHB) is a plant disease with serious economic and health impacts. Although it has proved difficult to combat this disease, one strategy that has been examined is the introduction of an indigenous fungal protective gene into cereals such as wheat, barley, and rice. Thus far th...

  18. Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens

    Science.gov (United States)

    In an effort to develop the molecular strategies to control rice (Oryzae sativa) diseases, molecular interactions of rice with rice blast [Magnaporthe oryzae, formerly (Magnaporthe grisea] and sheath blight (Rhizoctonia solani) fungi were analyzed. The interaction of rice with M. oryzae follows a b...

  19. Controlled release of Pantoea agglomerans E325 for biocontrol of fire blight

    Science.gov (United States)

    Microencapsulation and controlled release of Pantoea agglomerans strain E325 (E325), which is an antagonist to bacterial pathogen (Erwinia amylovora) of fire blight, a devastating disease of apple and pear, have been investigated. Uniform core-shell alginate microcapsules (AMCs), 60-300 µm in diamet...

  20. Bringing Benefits and Warding off Blights in Due Commandment (Analytic Study Compared with the Jordanian Law)

    Science.gov (United States)

    Al Etoum, Niebal Mohd Ibrahim; Mowafi, Hanan Sami Mohammad; Al Zubaidi, Faraj Hamad Salem

    2016-01-01

    The study aims to highlight the benefits and blights of the due commandment (intestate law) under Jordanian law for the year (2010) in the article (279). The study came in two sections, the first one dealt with the concept of due commandment, its legitimacy, verdict and terms; in the second section, I've dealt with the persons entitled to due…

  1. Fire blight in different production systems in Germany and strategies to control the disease

    OpenAIRE

    Jelkmann, Wilhelm

    2004-01-01

    Fire blight, caused by the bacterium Erwinia amylovora, is a serious disease of pome fruits in many countries of the world. The disease was first recognized at the end of the 18th century in the USA. Its first occurence in Europe was reported in 1957 from England.

  2. People of the ancient rainforest: late Pleistocene foragers at the Batadomba-lena rockshelter, Sri Lanka.

    Science.gov (United States)

    Perera, Nimal; Kourampas, Nikos; Simpson, Ian A; Deraniyagala, Siran U; Bulbeck, David; Kamminga, Johan; Perera, Jude; Fuller, Dorian Q; Szabó, Katherine; Oliveira, Nuno V

    2011-09-01

    Batadomba-lena, a rockshelter in the rainforest of southwestern Sri Lanka, has yielded some of the earliest evidence of Homo sapiens in South Asia. H. sapiens foragers were present at Batadomba-lena from ca. 36,000 cal BP to the terminal Pleistocene and Holocene. Human occupation was sporadic before the global Last Glacial Maximum (LGM). Batadomba-lena's Late Pleistocene inhabitants foraged for a broad spectrum of plant and mainly arboreal animal resources (monkeys, squirrels and abundant rainforest snails), derived from a landscape that retained equatorial rainforest cover through periods of pronounced regional aridity during the LGM. Juxtaposed hearths, palaeofloors with habitation debris, postholes, excavated pits, and animal and plant remains, including abundant Canarium nutshells, reflect intensive habitation of the rockshelter in times of monsoon intensification and biome reorganisation after ca. 16,000 cal BP. This period corresponds with further broadening of the economic spectrum, evidenced though increased contribution of squirrels, freshwater snails and Canarium nuts in the diet of the rockshelter occupants. Microliths are more abundant and morphologically diverse in the earliest, pre-LGM layer and decline markedly during intensified rockshelter use on the wane of the LGM. We propose that changing toolkits and subsistence base reflect changing foraging practices, from shorter-lived visits of highly mobile foraging bands in the period before the LGM, to intensified use of Batadomba-lena and intense foraging for diverse resources around the site during and, especially, following the LGM. Traces of ochre, marine shell beads and other objects from an 80 km-distant shore, and, possibly burials reflect symbolic practices from the outset of human presence at the rockshelter. Evidence for differentiated use of space (individual hearths, possible habitation structures) is present in LGM and terminal Pleistocene layers. The record of Batadomba-lena demonstrates

  3. Control of seedling blight in winter wheat by seed treatments - impact on emergence, crop stand, yield and deoxynivalenol

    DEFF Research Database (Denmark)

    Jørgensen, Lise N; K. Nielsen, Linda; Nielsen, Bent J

    2012-01-01

    Seedling blight caused by Fusarium spp. and Microdochium spp. is common on wheat grain, and severe attacks can lead to poor establishment of new crops. Several seed treatments using bitertanol, difenoconazole, triticonazole, maneb, fludioxonil or guazatine found to significantly control Fusarium...... seedling blight (Fusarium spp., Microdochium spp.) were improving germination and reducing seedling blight on roots and coleoptiles under field conditions in winter wheat. Some of the seed treatments were also shown to have an impact on soil-borne Fusarium in trials carried out under glasshouse conditions...... germination by approximately 100%, which led to an improved crop stand and yield increases in the range of 1.2–1.5 tonnes ha−1. Attacks of Fusarium head blight were relatively slight in the two trials and the content of deoxynivalenol was below the EU limits of 1250 ppb in the harvested grain. Even so, seed...

  4. Biosynthesis of the antimetabolite 6-thioguanine in Erwinia amylovora plays a key role in fire blight pathogenesis.

    Science.gov (United States)

    Coyne, Sébastien; Chizzali, Cornelia; Khalil, Mohammed N A; Litomska, Agnieszka; Richter, Klaus; Beerhues, Ludger; Hertweck, Christian

    2013-09-27

    Sulfur for fire: The molecular basis for the biosynthesis of the antimetabolite 6-thioguanine (6TG) was unveiled in Erwinia amylovora, the causative agent of fire blight. Bioinformatics, heterologous pathway reconstitution in E. coli, and mutational analyses indicate that the protein YcfA mediates guanine thionation in analogy to 2-thiouridylase. Assays in planta and in cell cultures reveal for the first time a crucial role of 6TG in fire blight pathogenesis. PMID:24038828

  5. TURCICUM LEAF BLIGHT OF MAIZE INCITED BY Exserohilum turcicum: A REVIEW

    Directory of Open Access Journals (Sweden)

    T. Rajeshwar Reddy

    2014-03-01

    Full Text Available Globally maize (Zea mays L. is the first and most important cereal crop gown under diversity of environments unmatched by any other crop, as expansion of maize to new areas and environment still continues due to its range of plasticity. It is prone to as many as 112 diseases in different parts of the world, caused by fungi, bacteria, viruses and nematodes leading to extensive damage. In India about 61 diseases have been reported to affect the crop. These include seedling blights, stalk rots, foliar diseases, downy mildews and ear rots (Payaket al., 1973 and Payak and Sharma, 1985.Among the fungal diseases turcicum leaf blight caused by Exserohilum turcicum (Pass.. Leonard and Suggs. (Synonyms:Helminthosprium turcicum (Pass. Leonard and Suggs [Perfect stage: Setosphaeria turcica (Luttrell Leonard and Suggs. (Synonym: Trichometasphaeria turcica (Luttrell] is one the important foliar disease causing severe reduction in grain and fodder yield to the tune of 16 -98% (Kachapur and Hegde, 1988. The disease was first described by Passerini (1876 from Italy and by Butler (1907 from India. In India, this disease is prevalent in Andhra Pradesh, Karnataka, Bihar, Himachal Pradesh and Maharashtra. Turcicum leaf blight is potentially an important foliar disease in areas where the temperatures drop at night while the humidity is high. The disease is known to affect maize from seedling stage till harvest. Loss in grain yield will be more if it occurs at flowering, silking and grain filling stages. Lesions produced on the leaves of susceptible plants are normally large (4 -20 cm long and 1-5 cm wide, elliptical in shape and greyish green to tan in color, in conditions of high relative humidity, lesions may be covered with masses of dark conidia of the fungus. The conidia are olive grey and spindle shaped with 1- 9 septations. These conidia spread through air germinate on the surface and penetrate directly. Turcicum blight injures or kills the leaf tissues and

  6. Appraise a combination of fungicides against blast and sheath blight diseases of paddy (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Prasanna Kumar M K

    2014-02-01

    Full Text Available In present study various fungicides were screened against blast (leaf and neck and sheath blight disease of rice. Among them, Conika 50% WP (Kasugamycin 5% + Copper Oxychloride 45% WP, Dhanucop Team (Tricyclazole 75% WP and RIL-068/F1 48 WG (Kresoxim methyl 40% + Hexaconazole 8% WG were found effective against blast diseases. While, the seed treatment fungicide Isotianil SC 200 and its combination with Trifloxystrobin 500 SC were found least effective against leaf and neck blast diseases. However, in case of sheath blight, Thifluzamide 24% SC, RIL-068/F1 48 WG (Kresoxim methyl 40% + Hexaconazole 8% WG, Propiconazole 25% EC (Tilt, Tricyclazole 75% WP (Beam and a new combination fungicide, Fluxapyroxad 62.5 g/l + Epoxiconazlle 62.5 g/l EC (Adexar w/v EC were found effective.

  7. Production of bacterial leaf blight resistant mulberry through tissue culture and induced mutation

    International Nuclear Information System (INIS)

    Mon Noi multiple shoots obtained from axillary buds in vitro cultures were induced mutation by irradiating with gamma rays at the optimum dose (LD 50) of 40 Gy. In vitro inoculation technique for bacterial blight disease of mulberry caused by Pseudomonas syringae p v. mori was done by leaf-rub method, using bacterial suspension at 107 cells per milliliter which was the lowest concentration to cause highest disease severity. A total of 8357 Mon Noi gamma irradiated plantlets in 7-11 generations were screened for bacterial blight disease resistance. Eighteen plants survived and free from bacterial contamination. These surviving plants were in vitro rapid multiplication then screened for disease resistance in greenhouse. At present, only 4 lines from 18 plants are selected

  8. Occurrence of Leaf Blight on Cosmos Caused by Alternaria cosmosa in Korea

    Directory of Open Access Journals (Sweden)

    Jian Xin Deng

    2015-03-01

    Full Text Available In 2011, a leaf blight disease was observed on cosmos (Cosmos bipinnatus leaves in Nonsan, Korea. The causal pathogen was isolated and identified based on morphological and molecular approaches. Morphological characteristics of the pathogen matched well with the Alternaria cosmosa and also easily distinguishable from Alternaria zinniae reported from cosmos seeds by producing branched beak. Phylogenetically, the pathogen could not be distinguished from A. passiflorae based on the sequence analysis of a combined data set of Alt a1 and gpd genes. However, A. passiflorae was distinguished from the present species by having conidiophores with 4 to 5 conidiogenous loci. The results indicate that the present Alternaria species is A. cosmosa. Pathogenicity tests revealed that the isolate was pathogenic to the leaves of Cosmos bipinnatus. This is the first report of Alternaria blight disease caused by A. cosmosa on cosmos in Korea.

  9. Relationship between soil cellulolytic activity and suppression of seedling blight of barley in arable soils

    DEFF Research Database (Denmark)

    Rasmussen, Peter Have; Knudsen, I.; Elmholt, S.;

    2002-01-01

    The objective was to investigate the relationship between soil suppression of seedling blight of barley caused by Fusarium culmorum (W.G. Smith) Sacc. and the soil cellulolytic activity of beta-glucosidase, cellobiohydrolase and endocellulase. Disease suppression was investigated in bioassays with...... test soils mixed with sand, and barley seeds inoculated with F. culmorum. After 19 days, disease severity was evaluated on the barley seedlings. Soil cellulolytic activities were measured using 4-methylumbelliferyl-labelled fluorogenic substrates, and were expressed as V-max values obtained by using...... content of total C and N. From the preliminary results obtained, it is proposed that the cellulolytic activity can be used as an enzymatic approach to study the microbial turnover of organic matter in soils and as indicator of seedling blight of barley caused by F. culmorum. (C) 2002 Elsevier Science B...

  10. SURVEY OF TURCICUM LEAF BLIGHT OF MAIZE IN MAJOR MAIZE GROWING AREAS OF ANDHRA PRADESH

    Directory of Open Access Journals (Sweden)

    T. Rajeshwar Reddy

    2013-12-01

    Full Text Available Northern corn leaf blight or turcicum leaf blight caused by Exserohilum turcicum (Pass. Leonard and Suggs is one of the important diseases affecting photosynthesis with severe reduction in grain yield to an extent of 28 to 91%. Disease symptoms first appear on the leaves at any stage of plant growth, but usually at or after anthesis. The studies on survey reveals that high intensity of the disease was noted in the district where mean maximum temperature was below 320C and relative humidity was above 85 percent during the cropping season (June-October. The maximum PDI of 51 percent was recorded in Khammam district where the maximum temperature of 31.820C and the relative humidity of 87.5 percent was recorded whereas minimum (33 percent PDI was recorded in Guntur district and it was due to high maximum temperature of 35.220C and low relative humidity of 76 percent

  11. QTL mapping of resistance to sheath blight in maize (Zea mays L.)

    Institute of Scientific and Technical Information of China (English)

    YANG Hua; YANG Junpin; RONG Tingzhao; TAN Jun; QIU Zhenggao

    2005-01-01

    The genetic linkage map has been constructed with 125 SSR markers based on BC1:2 population consisting of 322 lines derived from the combination of (CML270×478) ×CML270 in maize (Zea mays L.), covering 1939.0 cM of maize genome. The average mapping distance was about 15.5 cM. Three major QTLs of the relative resistant index of resistance to maize sheath blight (Rhizoctonia solani) had been located on chromosomes 1, 7 by composite interval mapping (CIM). 7 QTLs of the plant height have been located on chromosomes 3, 4, 5, 6. Five QTLs of ear height have been located on chromosomes 3, 4, 6. The resistance to the sheath blight is shown to be not relative to plant height and ear height genetically. Inbred line CML270 was used for molecular assisted selection and cloning the genes.

  12. Limitations of Cassava Bacterial Blight: New Advances Limitaciones de la bacteriosis vascular de yuca: Nuevos avances

    OpenAIRE

    Verdier Valérie; López Camilo; Restrepo Silvia

    2006-01-01

    Cassava (Manihot esculenta), a starchy root crop, constitutes the source of alimentation for over 600 million people worldwide. Cassava Bacterial Blight (CBB) is caused bythe bacterium Xanthomonas axonopodis pv. manihotis (Xam). This review will focus on the current knowledge on the molecular cassava-Xam interaction. We will present the different molecular techniques developed to assess the genetic diversity and dynamics of Xam populations. We will also present different methods developed for...

  13. Reduction of Fusarium head blight and deoxynivalenol in wheat with early fungicide applications of prothioconazole

    OpenAIRE

    Edwards, Simon G; Godley, Nigel

    2010-01-01

    Abstract Numerous studies have identified the benefit of fungicides applied at flowering (Zadoks Growth Stage (GS) 59-69) in the reduction of Fusarium head blight (FHB) and the reduction of deoxynivalenol (DON) in harvested wheat grain. Two experiments were performed to identify the ability of prothioconazole (Proline?, Bayer CropScience) at three timings to reduce FHB and resulting DON in harvested grain of wheat. Prothioconazole (150 g ha-1) was applied to plots of wheat at GS3...

  14. REVIEW ON BANDED LEAF AND SHEATH BLIGHT OF RICE CAUSED BY Rhizoctonia solani KUHN

    OpenAIRE

    P. Srinivas; Ved Ratan; Atm Prakash Patel; G. Bindu Madhavi

    2013-01-01

    Rice (Oryza sativa L.) is a graminaceous crop. It is one of the important staple foods for Asian countries. Sheath blight disease is an important fungal disease of rice. Currently, this disease is distributed in almost all the rice growing states. The disease is alarming due to its intensive cultivation of modern high yielding varieties with high doses of nitrogenous fertilizers. Crop with a high plant density and close canopy associated favors disease build up from panicle initiation onwards...

  15. Controlling Foliar Blight of Wheat in South Asia: A Holistic Approach

    OpenAIRE

    Duveiller, E.; Sharma, R.C.; MERCADO, D.; MARAITE, H.; BHATTA, M. R.; Ortiz-Ferrara, G.; Sharma, D.

    2005-01-01

    Foliar blight is a major biotic constraint to wheat in the Gangetic plains of south Asia, particularly in the rice-wheat system. The disease occurs as a complex of spot blotch and tan spot caused by C. sativus and P. tritici-repentis, respectively. Yield losses reach on average 15% but are variable depending on sowing time, years, locations and stress conditions. Resistance breeding has been the cornerstone of the control strategy. Through international agricultural research efforts in collab...

  16. Fungicide baseline for mycelial sensitivity of Exserohilum turcicum, causal agent of northern corn leaf blight

    OpenAIRE

    Roberto Luis De Rossi; Erlei Melo Reis; Ricardo Brustolin

    2015-01-01

    Northern corn leaf blight, caused by Exserohilum turcicum (Et), is one of the major corn diseases which can reduce grain yield and quality. The aim of this study was to determine the mycelial sensitivity of ten Et isolates, five from Argentina and five from Brazil, to six fungicides (carbendazim, captan, fludioxinil, metalaxyl, iprodione and thiram) used in seed treatment. The inhibitory concentration (IC50) was determined by using seven concentrations of the fungicides supplemented to the ag...

  17. PHYSICAL, MORPHOLOGICAL PROPERTIES AND RAMAN SPECTROSCOPY OF CHESTNUT BLIGHT DISEASED CASTANEA SATIVA MILL. WOOD

    OpenAIRE

    Gokhan Gunduz,; Mehmet Ali Oral; Mehmet Akyuz; Deniz Aydemir; Barbaros Yaman; Nejla Asik; Ali Savas Bulbul; Surhay Allahverdiyev

    2016-01-01

    In this study, some of the physical and anatomical properties of Chestnut Blight Diseased (CBD) wood were investigated, and the study also included observations using Raman spectroscopy. The objective of these investigations was to determine the extent of the damage that is done to the wood of the diseased chestnut trees, which must be removed from the forest and used in the manufacture of industrial products. It was indicated that most of the adverse effects of the disease were in the vascu...

  18. Conjuring Blight in an Urban Landscape: Market Farms and Aerosol Murals in Oakland, CA

    OpenAIRE

    Watson, Jessica Weston

    2014-01-01

    This dissertation, Conjuring Blight in an Urban Landscape: Market Farms and Aerosol Murals in Oakland, CA, examines collaborations between the City of Oakland and several nonprofits to cover key city functions in the face of a fiscal crisis precipitated by the national recession (2008-2011). Based in eighteen months of ethnographic research and years of additional interaction, my research shows the ways that bureaucrats, gardeners and aerosol muralists are all actively inscribing spaces and c...

  19. Development of a weather-based model for Botrytis leaf blight of onion

    OpenAIRE

    Leandro Luiz Marcuzzo; Roberto Haveroth

    2016-01-01

    ABSTRACT In the present study, onion plants were tested under controlled conditions for the development of a climate model based on the influence of temperature (10, 15, 20 and 25°C) and leaf wetness duration (6, 12, 24 and 48 hours) on the severity of Botrytis leaf blight of onion caused by Botrytis squamosa. The relative lesion density was influenced by temperature and leaf wetness duration (P

  20. Capability of Streptomyces spp. in Controlling Bacterial Leaf Blight Disease in Rice Plants

    OpenAIRE

    Ratih D. Hastuti; Yulin Lestari2); Rasti Saraswati; Antonius Suwanto; Chaerani

    2012-01-01

    Problem statement: Bacterial Leaf Blight (BLB) caused by Xanthomonas oryzae pv. oryzae (Xoo) is the most damaging disease in lowland rice growing areas in Indonesia. Streptomyces spp. have been known as a producer of antimicrobial compounds that can be used as biocontrol agents. This study examined the ability of three promising indigenous Streptomyces isolates which were previously selected from in vitro agar media and greenhouse test to suppress natural infection of Xoo during dry and wet s...

  1. Appraise a combination of fungicides against blast and sheath blight diseases of paddy (Oryza sativa L.)

    OpenAIRE

    Prasanna Kumar M K; Veerabhadraswamy A L

    2014-01-01

    In present study various fungicides were screened against blast (leaf and neck) and sheath blight disease of rice. Among them, Conika 50% WP (Kasugamycin 5% + Copper Oxychloride 45% WP), Dhanucop Team (Tricyclazole 75% WP) and RIL-068/F1 48 WG (Kresoxim methyl 40% + Hexaconazole 8% WG) were found effective against blast diseases. While, the seed treatment fungicide Isotianil SC 200 and its combination with Trifloxystrobin 500 SC were found least effective against leaf and neck bla...

  2. EVALUATION OF TRICHODERMA SPP. ON BEAN CULTURE, IN ANTHRACNOSE, WEB BLIGHT AND ROOT-KNOT NEMATODE

    OpenAIRE

    P. E. V. Aguiar; S. M. Bonaldo; S. R. G. Moraes

    2014-01-01

    Mato Grosso is the third largest producer of bean from Brazil, being the third harvest (irrigated) the most productive, but diseases such as anthracnose, web blight and nematodes of galls cause losses to producers. In addition, a measure widely used and little studied for the control of diseases and nematodes in Mato Grosso is the biological control, which consists of the action of other microorganisms on phytopathogens. Thus, the objective of the present study was to evaluate the effect of T...

  3. TWIG BLIGHT AND DEFOLIATION CAUSED BY Colletotrichum horii IN PERSIMMONS IN BRAZIL

    Directory of Open Access Journals (Sweden)

    LOUISE LARISSA MAY DE MIO

    2015-03-01

    Full Text Available Persimmon anthracnose has been a great concern to Brazilian producers. This study aimed to identify and characterized the causal species from Brazilian persimmons byassessing morphological and molecular characteristics and pathogenicity tests. Five fungal isolatesobtained from diseased twigs and fruits were identified as Colletotrichum horii, based on morphologicalcharacteristics and nucleotide sequences of ITS region. Inoculation tests revealed that the fungal isolates caused necrotic spots followed by defoliation of leaves, blight of twigs and buds of potted persimmon plants.

  4. Genetic control of horizontal virus transmission in the chestnut blight fungus, Cryphonectria parasitica.

    OpenAIRE

    Cortesi, P; McCulloch, C.E.; Song, H; H. Lin; Milgroom, M G

    2001-01-01

    Vegetative incompatibility in fungi has long been known to reduce the transmission of viruses between individuals, but the barrier to transmission is incomplete. In replicated laboratory assays, we showed conclusively that the transmission of viruses between individuals of the chestnut blight fungus Cryphonectria parasitica is controlled primarily by vegetative incompatibility (vic) genes. By replicating vic genotypes in independent fungal isolates, we quantified the effect of heteroallelism ...

  5. The evolution and pathogenic mechanisms of the rice sheath blight pathogen

    OpenAIRE

    Zheng, Aiping; Lin, Runmao; Zhang, Danhua; Qin, Peigang; Xu, Lizhi; Ai, Peng; Ding, Lei; Wang, Yanran; Chen, Yao; Liu, Yao; Sun, Zhigang; Feng, Haitao; Liang, Xiaoxing; Fu, Rongtao; Tang, Changqing

    2013-01-01

    Rhizoctonia solani is a major fungal pathogen of rice (Oryza sativa L.) that causes great yield losses in all rice-growing regions of the world. Here we report the draft genome sequence of the rice sheath blight disease pathogen, R. solani AG1 IA, assembled using next-generation Illumina Genome Analyser sequencing technologies. The genome encodes a large and diverse set of secreted proteins, enzymes of primary and secondary metabolism, carbohydrate-active enzymes, and transporters, which prob...

  6. TURCICUM LEAF BLIGHT OF MAIZE INCITED BY Exserohilum turcicum: A REVIEW

    OpenAIRE

    T. Rajeshwar Reddy; P. Narayan Reddy; R. Ranga Reddy

    2014-01-01

    Globally maize (Zea mays L.) is the first and most important cereal crop gown under diversity of environments unmatched by any other crop, as expansion of maize to new areas and environment still continues due to its range of plasticity. It is prone to as many as 112 diseases in different parts of the world, caused by fungi, bacteria, viruses and nematodes leading to extensive damage. In India about 61 diseases have been reported to affect the crop. These include seedling blights,...

  7. [Erwinia amylovora--the fire blight pathogen of trees in Ukraine].

    Science.gov (United States)

    Iakovleva, L M; Moroz, S N; Shcherbina, T N; Ogorodnik, L E; Gvozdiak, R I; Patyka, V F

    2014-01-01

    Niduses of fire blight of fruit and ornamental trees have been found in the Kyiv and Vinnitsa regions of Ukraine. Pathogen Erwinia amylovora was isolated between April and October. The pathogen was often accompanied by bacteria Pseudomonas syringae pv. syringae. Artificial infection with a mixture of bacteria E. amylovora and P. syringae pv. syringae accelerates and enhances the disease process in the laboratory. PMID:25199342

  8. Chemical Control of Septoria Blight of Parsley Caused by Septoria petroselini

    OpenAIRE

    TOK, Fatih Mehmet

    2008-01-01

    The effects of various fungicides on spore germination, mycelial growth, seed transmission, and infection by Septoria petroselini Desm., the causal agent of Septoria blight of parsley, were determined in this study. Eleven fungicides (azoxystrobin, benomyl, captan, copper oxychloride, kresoxim-methyl mancozeb, maneb, propineb, tebuconazole, thiram, and trifloxystrobin) were tested at various concentrations ranging from 0.025 to 50 mg l-1 in spore germination and mycelial growth assays. Tebuco...

  9. Biocontrol Activity of Myxococcus sp. KYC 1126 against Phytophthora Blight on Hot Pepper

    OpenAIRE

    Sung Chul Yun; Sung Taek Kim

    2011-01-01

    Bacteriolytic myxobacteria have been known to secrete various antifungal metabolites against several soilborne phytopathogens including Phytophthora. Among the three isolates of Myxococcus spp., KYC 1126 and KYC 1136 perfectly inhibited the mycelial growth of Phytophtora capsici in vitro. In order to show the biocontrol activity on Phytophthora blight of hot pepper, we tried to find the best way of application of myxobacterial isolate. Although KYC 1126 fruiting body was easily grown on the c...

  10. Main source of stem blight infections and possibilities of reducing symptoms

    OpenAIRE

    Zellner, Michael; Hofbauer, Johann; Keil, Sven; Benker, Marianne

    2011-01-01

    Symptomless seed tubers are no guarantee for them being free of tuber blight, therefore they bear the risk of bringing P. infestans to the fields. Because of the high risk of using infected seed tubers control measures are highly recommended. Systemic fungicides spread into the plant tissue and can reduce the growth of the fungus from within the plant. Treating seed tubers with copper is another possibility especially in organic farming. Further research should deal with possibilities to redu...

  11. Non-conventional possibilities of protection of apple and pear against fire blight (Erwinia amylovora)

    OpenAIRE

    Piotr Sobiczewski; Grzegorz Krupiński; Joanna Puławska

    2013-01-01

    Standard program of plant protection against fire blight consists of use of management practices and chemical control method. Recently a new, non-conventional possibilities based on application of biocontrol agents (two biopreparations have been already introduced into practice: Bliteban A506 (Pseudomonas fluorescens) and BlossomBless (Pantoea agglomerans), plant extracts active against Erwinia amylovora (AkseBio containing extracts from Thymbra spicata and Biomit Plussz with extracts from va...

  12. Characterization of fire blight strains (Erwinia amylovora) from different host plants from Macedonia

    OpenAIRE

    Mitrev, Sasa; Karov, Ilija; Spasov, Dusan; Kostadinovska, Emilija; Kovacevik, Biljana; TODOROVSKA, Elena

    2013-01-01

    Fire blight, caused by Erwinia amylovora (Burr.) Winslow et al. is twenty years old and the most destructive disease of pears and to a lesser degree of apples, quinces and several other members of the Rosaceae family in the Republic of Macedonia. E. amylovora is a quarantine pathogen for the country and has already caused considerable material damage in orchards with a tendency for further spreading. E. amylovora was reported in the Republic of Macedonia for the first time in 1991 on pea...

  13. Medfly Ceratitis capitata as Potential Vector for Fire Blight Pathogen Erwinia amylovora: Survival and Transmission

    Science.gov (United States)

    Ordax, Mónica; Piquer-Salcedo, Jaime E.; Santander, Ricardo D.; Sabater-Muñoz, Beatriz; Biosca, Elena G.; López, María M.; Marco-Noales, Ester

    2015-01-01

    Monitoring the ability of bacterial plant pathogens to survive in insects is required for elucidating unknown aspects of their epidemiology and for designing appropriate control strategies. Erwinia amylovora is a plant pathogenic bacterium that causes fire blight, a devastating disease in apple and pear commercial orchards. Studies on fire blight spread by insects have mainly focused on pollinating agents, such as honeybees. However, the Mediterranean fruit fly (medfly) Ceratitis capitata (Diptera: Tephritidae), one of the most damaging fruit pests worldwide, is also common in pome fruit orchards. The main objective of the study was to investigate whether E. amylovora can survive and be transmitted by the medfly. Our experimental results show: i) E. amylovora can survive for at least 8 days inside the digestive tract of the medfly and until 28 days on its external surface, and ii) medflies are able to transmit the bacteria from inoculated apples to both detached shoots and pear plants, being the pathogen recovered from lesions in both cases. This is the first report on E. amylovora internalization and survival in/on C. capitata, as well as the experimental transmission of the fire blight pathogen by this insect. Our results suggest that medfly can act as a potential vector for E. amylovora, and expand our knowledge on the possible role of these and other insects in its life cycle. PMID:25978369

  14. Development of a weather-based model for Botrytis leaf blight of onion

    Directory of Open Access Journals (Sweden)

    Leandro Luiz Marcuzzo

    2016-03-01

    Full Text Available ABSTRACT In the present study, onion plants were tested under controlled conditions for the development of a climate model based on the influence of temperature (10, 15, 20 and 25°C and leaf wetness duration (6, 12, 24 and 48 hours on the severity of Botrytis leaf blight of onion caused by Botrytis squamosa. The relative lesion density was influenced by temperature and leaf wetness duration (P <0.05. The disease was most severe at 20°C. Data were subjected to nonlinear regression analysis. Beta generalized function was used to adjust severity and temperature data, while a logistic function was chosen to represent the effect of leaf wetness on the severity of Botrytis leaf blight. The response surface obtained by the product of two functions was expressed as ES = 0.008192 * (((x-51.01089 * ((30-x1.19052 * (0.33859/(1+3.77989 * exp (-0.10923*y, where ES represents the estimated severity value (0.1; x, the temperature (°C; and y, the leaf wetness (in hours. This climate model should be validated under field conditions to verify its use as a computational system for the forecasting of Botrytis leaf blight in onion.

  15. Bacteriocin Serratine-P as a biological tool in the control of fire blight Erwinia amylovora.

    Science.gov (United States)

    Schoofs, H; Vandebroek, K; Pierrard, A; Thonart, P; Lepoivre, P; Beaudry, T; Deckers, T

    2002-01-01

    Fire blight, caused by the bacterium Erwinia amylovora (Burill Winslow et al.), is the most important bacterial disease in European pear growing. It can cause a lot of damage in some countries on apple and on pear trees in orchards and also in the fruit tree nurseries. In Belgium, the disease is present since 1972. Control of fire blight in Belgian fruit orchards is made on a broad basis of measurements in and around the fruit trees. The use of an antibiotic is allowed for application only during the primary blossom period under strict controlled regulations. The use of antobiotics in agriculture is strongly discussed on the European level today and will probably disappear in the near future. Therefore, the research on fire blight control concentrates on the possibilities of biological control with antagonistic bacteria such as Pantoea agglomerans (Erwinia herbicola), Bacillus subtilis or Pseudomonas syringae strain A 506. The use of Serratine-P, a phage tail-like bacteriocin, produced by Serratia plymiticum, shows an interesting antibacterial activity against Erwinia amylovora. Its mode of action consists in the perforation of the cytoplasmic membrane of the target cell, inducing perturbations in cellular exchanges and a final lysis of the bacterial cell. In this paper some trials are discussed on the use of Serratine-P at different doses and on different infection types on pear trees. The results indicate interesting protection possibilities on blossom- and fruit infections. PMID:12701444

  16. Medfly Ceratitis capitata as Potential Vector for Fire Blight Pathogen Erwinia amylovora: Survival and Transmission.

    Science.gov (United States)

    Ordax, Mónica; Piquer-Salcedo, Jaime E; Santander, Ricardo D; Sabater-Muñoz, Beatriz; Biosca, Elena G; López, María M; Marco-Noales, Ester

    2015-01-01

    Monitoring the ability of bacterial plant pathogens to survive in insects is required for elucidating unknown aspects of their epidemiology and for designing appropriate control strategies. Erwinia amylovora is a plant pathogenic bacterium that causes fire blight, a devastating disease in apple and pear commercial orchards. Studies on fire blight spread by insects have mainly focused on pollinating agents, such as honeybees. However, the Mediterranean fruit fly (medfly) Ceratitis capitata (Diptera: Tephritidae), one of the most damaging fruit pests worldwide, is also common in pome fruit orchards. The main objective of the study was to investigate whether E. amylovora can survive and be transmitted by the medfly. Our experimental results show: i) E. amylovora can survive for at least 8 days inside the digestive tract of the medfly and until 28 days on its external surface, and ii) medflies are able to transmit the bacteria from inoculated apples to both detached shoots and pear plants, being the pathogen recovered from lesions in both cases. This is the first report on E. amylovora internalization and survival in/on C. capitata, as well as the experimental transmission of the fire blight pathogen by this insect. Our results suggest that medfly can act as a potential vector for E. amylovora, and expand our knowledge on the possible role of these and other insects in its life cycle. PMID:25978369

  17. FARMERS AWARENESS AND PERCEPTIONS OF ALTERNARIA LEAF PETIOLE AND STEM BLIGHT AND THEIR PREFERRED SWEETPOTATO TRAITS IN UGANDA

    Directory of Open Access Journals (Sweden)

    Godfrey Sseruwu

    2016-02-01

    Full Text Available A participatory rural appraisal was conducted in Kabale district in south-western Uganda and Luwero district in central Uganda to establish farmers’ awareness and perceptions of Alternaria leaf petiole and stem blight (commonly referred to as Alternaria blight and their varietal preferences. The study revealed that the two regions had similar production constraints but the degree of importance of the constraints varies between each region. Diseases, pests and drought are the most important production constraints in both regions. Among the diseases, Alternaria blight is the most important disease constraint in Kabale whereas sweetpotato virus disease is the most important in Luwero. Among the pests, caterpillars (Acraea acerata are a bigger problem in Luwero than in Kabale, while vermin, especially mole rats (Tachyoryctes splendens, are a bigger problem in Kabale than in Luwero. Healthy planting material availability and distribution are important constraints. Among the most desired sweetpotato attributes in both districts are high yield, early maturity, high dry mass, and storability in the soil after maturity to enable sequential harvesting. Most of the farmers consider Alternaria blight to be a serious production constraint and estimate the yield loss in severely infected fields to be above 50%. However, Alternaria blight incidence has seasonal variations with higher incidences in the wet and very wet seasons in Kabale. On the other hand, Alternaria blight is most severe during the dry season in Luwero. Most of the farmers are not aware of any control measures for these diseases. However, some of them use rogueing as a control measure and others cultivate resistant genotypes like Rwabafuruki and Nyinakamanzi in Kabale, and Kakamega in Luwero. Since most of the existing genotypes are susceptible, breeding for Alternaria blight is a priority in both districts combined with an effective seed distribution system to increase utilization of the

  18. Eficiência do metalaxyl no controle da requeima do tomateiro Efficiency of Metalaxyl to control tomato late blight

    OpenAIRE

    Celson Rodrigues; Luiz G Ribeiro; José Carlos Lopes; Freitas, Flávio S.; Luis Antonio S. de Azevedo

    2000-01-01

    Foi avaliada a eficiência das dosagens de 1; 2,5 e 5 g/cova do fungicida Ridomil 50 gr (metalaxyl 50 g/kg), em aplicação única no solo, comparada com a dosagem de 400 g/100 litros de água do Fólio (metalaxyl + clorotalonil, 80 + 400 g/kg) e do Ridomil Mancozeb br (metalaxyl + mancozeb, 80 + 640 g/kg), em dez pulverizações, para o controle da requeima do tomateiro cv. Santa Clara. O delineamento experimental foi de blocos ao acaso com seis tratamentos e quatro repetições. A percentagem de área...

  19. REDUCING FUNGICIDE USAGE FOR POTATO PRODUCTION BY UNRAVELING TUBER AND FOLIAGE DEFENSE MECHANISMS AGAINST THE LATE BLIGHT PATHOGEN PHYTOPHTHORA INFESTANS

    Science.gov (United States)

    More than 215 million RNA sequences from potato tubers infected with P. infestans were generated. This represents a >1,300-fold increase in data generation relative to our previous expectation of 160,000 sequence reads. This increase was achieved by capi...

  20. Diverse mechanisms shape the evolution of virulence factors in the potato late blight pathogen Phytophthora infestans sampled from China.

    Science.gov (United States)

    Wu, E-Jiao; Yang, Li-Na; Zhu, Wen; Chen, Xiao-Mei; Shang, Li-Ping; Zhan, Jiasui

    2016-01-01

    Evolution of virulence in plant pathogens is still poorly understood but the knowledge is important for the effective use of plant resistance and sustainable disease management. Spatial population dynamics of virulence, race and SSR markers in 140 genotypes sampled from seven geographic locations in China were compared to infer the mechanisms driving the evolution of virulence in Phytophthora infestans (P. infestans). All virulence types and a full spectrum of race complexity, ranging from the race able to infect the universally susceptible cultivar only to all differentials, were detected. Eight and two virulence factors were under diversifying and constraining selection respectively while no natural selection was detected in one of the virulence types. Further analyses revealed excesses in simple and complex races but deficiency in intermediate race and negative associations of annual mean temperature at the site from which pathogen isolates were collected with frequency of virulence to differentials and race complexity in the pathogen populations. These results suggest that host selection may interact with other factors such as climatic conditions in determining the evolutionary trajectory of virulence and race structure in P. infestans and global warming may slow down the emergence of new virulence in the pathogen. PMID:27193142

  1. Prospect of the QTL-qSB-9Tq utilized in molecular breeding program of japonica rice against sheath blight

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The major QTL-qSB-9Tq conferring partial resistance to rice (Oryza sativa L.) sheath blight (Rhizoctonia solani Kühn) has been verified on chromosome 9 of the indica rice cultivar, Teqing. In this study, the prospect of this QTL utilized in molecular breeding program of japonica rice for sheath blight resistance was investigated. Most of the japonica rice cultivars showed lower level of sheath blight resistance than the indica rice cultivars. At the corresponding site of qSB-9Tq, nine typical japonica rice culfivars from different ecological regions or countries proved to possess the susceptible allele(s). Introgression of qSB-9Tq into these cultivars enhanced their resistance level by decreasing sheath blight score of 1.0 (0.5-1.3), which indicated that qSB-9Tq had a large potential in strengthening the resistance of japonica rice to sheath blight. The use of the three molecular markers, which were polymorphic between Teqing and many japonica rice cultivars, promotes the application of qSB-9Tq in a concrete molecular breeding program.

  2. Cropload management and appropriate harvest timing improves final fruit size and fruit quality of US 71655-014, a new fire blight resistant European pear selection

    Science.gov (United States)

    US71655-014 (‘Gem’) is a fire blight resistant pear selection developed at the USDA Appalachian Fruit Research Station. Despite possessing several positive attributes (precocity, high annual production, attractive fruit appearance, fire blight resistance good storability and consumer acceptance), ‘...

  3. INDUCTION OF SYSTEMIC RESISTANCE BY BIOCONTROL AGENTS AGAINST BACTERIAL BLIGHT OF COTTON CAUSED BY XANTHOMONAS CAMPESTRIS PV. MALVACEARUM

    Directory of Open Access Journals (Sweden)

    Niranjana S. Ramachandrappa

    2013-04-01

    Full Text Available Bioagents such as Trichoderma harzianum, Pseudomonas fluorescens and Bacillus subtilis were isolated from cotton rhizosphere soil and tested individually for their effectiveness in controlling bacterial blight of cotton caused by Xanthomonas campestris pv. malvacearum (Xcm. Talc based formulations were prepared and used for seed treatment at different concentrations for assessing their ability to stimulate plant growth and to control bacterial blight disease. Among bioagents, P. fluorescens and T. harzianum proved to be effective in controlling disease under field conditions.  Other than direct action, these bioagents triggered the defense related enzymes involved in synthesis of phenols. Higher activity of peroxidase, phenylalanine ammonia-lyase, polyphenol oxidase and b-1,3-glucanase was observed in P. fluorescens and T. harzianum treated cotton plants after challenge inoculation with Xcm. Seed treatment with these bioagents enhanced the seed germination and growth parameters against blight disease and they also induced systemic resistance in plant for defense mechanisms. 

  4. Cladosporium cladosporioides and C. tenuissimum Cause Blossom Blight in Strawberry in Korea.

    Science.gov (United States)

    Nam, Myeong Hyeon; Park, Myung Soo; Kim, Hyun Sook; Kim, Tae Il; Kim, Hong Gi

    2015-09-01

    Blossom blight in strawberry was first observed in a green house in Nonsan, Damyang, and Geochang areas of Korea, between early January to April of 2012. Disease symptoms started as a grey fungus formed on the stigma, which led to the blossom blight and eventually to black rot and necrosis of the entire flower. We isolated the fungi purely from the infected pistils and maintained them on potato dextrose agar (PDA) slants. To test Koch's postulates, we inoculated the fungi and found that all of the isolates caused disease symptoms in the flower of strawberry cultivars (Seolhyang, Maehyang, and Kumhyang). The isolates on PDA had a velvet-like appearance, and their color ranged between olivaceous-brown and smoky-grey to olive and almost black. The intercalary conidia of the isolates were elliptical to limoniform, with sizes ranging from 5.0~10.5 × 2.5~3.0 µm to 4.0~7.5 × 2.0~3.0 µm, respectively. The secondary ramoconidia of these isolates were 0- or 1-septate, with sizes ranging betweem 10.0~15.0 × 2.5~3.7 µm and 8.7~11.2 × 2.5~3.2 µm, respectively. A combined sequence analysis of the internal transcribed spacer regions, partial actin (ACT), and translation elongation factor 1-alpha (TEF) genes revealed that the strawberry isolates belonged to two groups of authentic strains, Cladosporium cladosporioides and C. tenuissimum. Based on these results, we identified the pathogens causing blossom blight in strawberries in Korea as being C. cladosporioides and C. tenuissimum. PMID:26539056

  5. EVALUATION OF TRICHODERMA SPP. ON BEAN CULTURE, IN ANTHRACNOSE, WEB BLIGHT AND ROOT-KNOT NEMATODE

    Directory of Open Access Journals (Sweden)

    P. E. V. Aguiar

    2014-09-01

    Full Text Available Mato Grosso is the third largest producer of bean from Brazil, being the third harvest (irrigated the most productive, but diseases such as anthracnose, web blight and nematodes of galls cause losses to producers. In addition, a measure widely used and little studied for the control of diseases and nematodes in Mato Grosso is the biological control, which consists of the action of other microorganisms on phytopathogens. Thus, the objective of the present study was to evaluate the effect of Trichoderma harzianum and T. asperellum in the development (height of plants, chlorophyll and number of pods of culture of bean, in the control of anthracnose (Colletotrichum lindemuthianum, web blight (Rhizoctonia solani and in the population of Meloidogyne spp. in the soil. The experiment was accomplished in area experimental of University Federal of Mato Grosso/Campus Sinop. The experimental design was of entirely randomized with 12 parcels of 5m² each, with 3 treatments and 4 replications. The cultivar used was Whitey, carioca group, and the seed treatment performed with product Pyraclostrobin + Thiophanate Methyl + Fipronil and after drying of the inoculation of biocontrol agents and manual seeding. It was observed that the application of T. harzianum and T. asperellum, not promoted increase of chlorophyll, height of plants in bean culture, without reducing the population of Meloidogyne spp.. However, biocontrol agents have reduced the severity of anthracnose and web blight and promoted an increase in the average number of plant pods-1. It is therefore concluded that biocontrol agents show potential for application in bean culture in the North of Mato Grosso.

  6. Development of the First Cisgenic Apple with Increased Resistance to Fire Blight.

    Science.gov (United States)

    Kost, Thomas D; Gessler, Cesare; Jänsch, Melanie; Flachowsky, Henryk; Patocchi, Andrea; Broggini, Giovanni A L

    2015-01-01

    The generation and selection of novel fire blight resistant apple genotypes would greatly improve the management of this devastating disease, caused by Erwinia amylovora. Such resistant genotypes are currently developed by conventional breeding, but novel breeding technologies including cisgenesis could be an alternative approach. A cisgenic apple line C44.4.146 was regenerated using the cisgene FB_MR5 from wild apple Malus ×robusta 5 (Mr5), and the previously established method involving A. tumefaciens-mediated transformation of the fire blight susceptible cultivar 'Gala Galaxy' using the binary vector p9-Dao-FLPi. The line C44.4.146 was shown to carry only the cisgene FB_MR5, controlled by its native regulatory sequences and no transgenes were detected by PCR or Southern blot following heat induced recombinase-mediated elimination of the selectable markers. Although this line contains up to 452 bp of vector sequences, it still matches the original definition of cisgenesis. A single insertion of T-DNA into the genome of 'Gala Galaxy' in chromosome 16 was identified. Transcription of FB_MR5 in line C44.4.146 was similar to the transcription in classically bred descendants of Mr5. Three independent shoot inoculation experiments with a Mr5 avirulent strain of Erwinia amylovora were performed using scissors or syringe. Significantly lower disease symptoms were detected on shoots of the cisgenic line compared to those of untransformed 'Gala Galaxy'. Despite the fact that the pathogen can overcome this resistance by a single nucleotide mutation, this is, to our knowledge, the first prototype of a cisgenic apple with increased resistance to fire blight. PMID:26624292

  7. The fire blight pathogen Erwinia amylovora requires the rpoN gene for pathogenicity in apple.

    Science.gov (United States)

    Ramos, Laura S; Lehman, Brian L; Sinn, Judith P; Pfeufer, Emily E; Halbrendt, Noemi O; McNellis, Timothy W

    2013-10-01

    RpoN is a σ(54) factor regulating essential virulence gene expression in several plant pathogenic bacteria, including Pseudomonas syringae and Pectobacterium carotovorum. In this study, we found that mutation of rpoN in the fire blight pathogen Erwinia amylovora caused a nonpathogenic phenotype. The E. amylovora rpoN Tn5 transposon mutant rpoN1250::Tn5 did not cause fire blight disease symptoms on shoots of mature apple trees. In detached immature apple fruits, the rpoN1250::Tn5 mutant failed to cause fire blight disease symptoms and grew to population levels 12 orders of magnitude lower than the wild-type. In addition, the rpoN1250::Tn5 mutant failed to elicit a hypersensitive response when infiltrated into nonhost tobacco plant leaves, and rpoN1250::Tn5 cells failed to express HrpN protein when grown in hrp (hypersensitive response and pathogenicity)-inducing liquid medium. A plasmid-borne copy of the wild-type rpoN gene complemented all the rpoN1250::Tn5 mutant phenotypes tested. The rpoN1250::Tn5 mutant was prototrophic on minimal solid and liquid media, indicating that the rpoN1250::Tn5 nonpathogenic phenotype was not caused by a defect in basic metabolism or growth. This study provides clear genetic evidence that rpoN is an essential virulence gene of E. amylovora, suggesting that rpoN has the same function in E. amylovora as in P. syringae and Pe. carotovorum. PMID:23721085

  8. First Occurence of Fire Blight on Apricot (Prunus armeniaca in Hungary

    Directory of Open Access Journals (Sweden)

    Anita VÉGH

    2013-12-01

    Full Text Available During July 2012, a severe unusual disease symptom was observed on young shoots on apricot (Prunus armeniaca 10/13 hybrid in the city of Pomáz, near Budapest. The naturally infected shoots showed typical symptoms of fire blight including terminal shoots with brown to black necrotic lesions. Symptoms were the same as fire blight symptoms reported from other hosts and locations. The first occurrence of fire blight on an apricot tree in Europe was recorded in Czech Republic in 2011. Samples of the leaves and shoots with symptoms were macerated and spread on King’s medium B. After 24 hours of incubation at 26 °C, bacteria morphologically similar to E. amylovora were detected. Isolate induced hypersensitive reaction on tobacco (Nicotiana tabacum L. ‘White Burley’ leaves. Biochemical test was also used for identification, and the result of API 20E kit (Biomérieux, Marcy l’Etoile, France, demonstrate that the bacterium belongs to Enterobacteriaceae family. A pathogenicity tests were positive on young apricot shoots and immature fruits. For molecular identification of the pathogen the 16S rDNA region was amplified from isolate Ea-ApricotPo1 with a general bacterial primer pair (63f forward and 1389r reverse. The PCR products were cloned into a pGEM T-Easy plasmid vector (Promega, Madison, WI USA and were transformed into Escherichia coli DH5α cells. A recombinant plasmid (2A2.5 was sequenced by M13 forward and reverse primers. The sequence was deposited in GenBank (Accession No. HF546214 and showed 99-100% sequence homology with a number of E. amylovora isolates, including type strain FN666575 with 100% similarity. On the basis of the symptoms, colony morphology, biochemical tests, and 16S rDNA sequence homology, the pathogen was identified as E. amylovora. This is a first record of a natural outbreak of fire blight on apricot in Hungary.

  9. Integrating Cultivar Resistance and Seed Treatment with Planting Dates to Manage Chickpea Ascochyta Blight

    OpenAIRE

    C. Akem; S. Kabbabeh; Ahmed, S.

    2004-01-01

    The influence of chickpea (Cicer arietinum) planting date on seasonal epidemics of Ascochyta blight caused by Ascochyta rabiei (Pass.) Labrousse and on grain yield was evaluated during the 1997 and 1998 cropping seasons. Two chickpea cultivar (Ghab 1 and Ghab 3) and 2 breeding lines (FLIP 90-96 and F 88-85) were used in the field trials at 3 different locations representing the different agro ecological zones in which winter chickpea is grown in Syria and in most of the Mediterranean countrie...

  10. In vitro obtention and selection of pear mutants resistant to fire blight (Erwinia amylovora)

    International Nuclear Information System (INIS)

    To develop a standard protocol for in vitro culture technique to support mutation breeding of fruit trees, procedures for mutagen treatment and selection methods for resistance to fire blight (by Erwinia amylovora) were investigated. 60Co gamma rays or ultra violet light (257 nm) were used as mutagens. Leaves were irradiated then adventitious buds were regenerated on the in vitro culture medium. The regenerated plants were tested by artificial inoculation with pathogen to in vitro cultured plants and confirmed in the greenhouse. Conductivity test to measure the net electrolyte leakage seemed to be a good method to quantify the resistance to the pathogen. (author). 5 refs, 6 figs

  11. Relationship between soil cellulolytic activity and suppression of seedling blight of barley in arable soils

    DEFF Research Database (Denmark)

    Rasmussen, Peter Have; Knudsen, I.; Elmholt, S.; Jensen, D. F.

    2002-01-01

    the Hanes-Wolf transformation of the Michaelis-Menten equation. Soil samples from 6 to 13 cm depth were collected in the early spring as undisturbed blocks from 10 arable soils with different physico-chemical properties and cultivation history. Significant correlations were found between soil...... content of total C and N. From the preliminary results obtained, it is proposed that the cellulolytic activity can be used as an enzymatic approach to study the microbial turnover of organic matter in soils and as indicator of seedling blight of barley caused by F. culmorum. (C) 2002 Elsevier Science B...

  12. Personality in Late Midlife

    DEFF Research Database (Denmark)

    Mortensen, Erik Lykke; Flensborg-Madsen, Trine; Molbo, Drude;

    2014-01-01

    To analyze associations in late midlife between sex, age, education and social class, and the Big Five personality traits; to analyze associations between personality traits and cognitive ability in late midlife; and to evaluate how these associations are influenced by demographic factors....

  13. Enhanced biological control of phytophthora blight of pepper by biosurfactant-producing pseudomonas.

    Science.gov (United States)

    Ozyilmaz, Umit; Benlioglu, Kemal

    2013-12-01

    Pseudomonas isolates from different crop plants were screened for in vitro growth inhibition of Phytophthora capsici and production of biosurfactant. Two in vivo experiments were performed to determine the efficacy of selected Pseudomonas strains against Phytophthora blight of pepper by comparing two fungicide treatments [acibenzolar-S-methyl (ASM) and ASM + mefenoxam]. Bacterial isolates were applied by soil drenching (1 × 10(9) cells/ml), ASM (0.1 μg a.i./ml) and ASM + mefenoxam (0.2 mg product/ml) were applied by foliar spraying, and P. capsici inoculum was incorporated into the pot soil three days after treatments. In the first experiment, four Pseudomonas strains resulted in significant reduction from 48.4 to 61.3% in Phytophthora blight severity. In the second experiment, bacterial treatments combining with olive oil (5 mL per plant) significantly enhanced biological control activity, resulting in a reduction of disease level ranging from 56.8 to 81.1%. ASM + mefenoxam was the most effective treatment while ASM alone was less effective in both bioassays. These results indicate that our Pseudomonas fluorescens strains (6L10, 6ba6 and 3ss9) that have biosurfactant-producing abilities are effective against P. capsici on pepper, and enhanced disease suppression could be achieved when they were used in combination with olive oil. PMID:25288970

  14. Preparation and evaluation of Bacillus megaterium-alginate microcapsules for control of rice sheath blight disease.

    Science.gov (United States)

    Wiwattanapatapee, R; Chumthong, A; Pengnoo, A; Kanjanamaneesathian, M

    2013-08-01

    Bacillus megaterium encapsulated in calcium alginate microcapsules was prepared and tested for its efficacy against sheath blight disease of rice. In laboratory conditions, the aqueous suspension (1:100, v/v in potato dextrose agar) of the bacterial microcapsules (10(10) spores/ml) inhibited mycelial growth of Rhizoctonia solani (>99 %) after the microcapsules were produced and stored for 12 months at room temperature (28 ± 2 °C). The survival of the bacterium in the microcapsules in response to ultraviolet (u.v.) irradiation and high temperature was investigated. The survivability of the bacterium in the encapsulated form was greater than that of the fresh cells when it was subjected to u.v. (20-W General electric u.v. lamp from a 25 cm distance for 48 h) and a high temperature treatment (80 °C for 48 h). Cells of the bacterium were detected by scanning electron microscope on both the leaf sheath and the leaf blade (in pot tests in a greenhouse) after spraying encapsulated product. The number of bacteria on the surface of both rice tissues (5 Log. number/g of plant) after spraying with encapsulated product was not significantly different from that after spraying with fresh cells onto the rice seedlings. Spraying the encapsulated B. megaterium on rice plants in the greenhouse was as effective as spraying a chemical fungicide for suppressing rice sheath blight disease. PMID:23508397

  15. Investigation of the effect of nitrogen on severity of Fusarium Head Blight in barley

    DEFF Research Database (Denmark)

    Yang, Fen; Jensen, J.D.; Spliid, N.H.;

    2010-01-01

    The effect of nitrogen on Fusarium Head Blight (FHB) in a susceptible barley cultivar was investigated using gel-based proteomics. Barley grown with either 15 or 100 kg ha(-1)N fertilizer was inoculated with Fusarium graminearum (Fg). The storage protein fraction did not change significantly in r...... indicated that increased Fusarium infection occurred in barley with low N and suggests control of N fertilization as a possible way to minimise FHB in barley.......The effect of nitrogen on Fusarium Head Blight (FHB) in a susceptible barley cultivar was investigated using gel-based proteomics. Barley grown with either 15 or 100 kg ha(-1)N fertilizer was inoculated with Fusarium graminearum (Fg). The storage protein fraction did not change significantly in...... degraded by fungal proteases. Greater spot volume changes occurred in response to Fg in plants grown with low nitrogen, although proteomes of uninfected plants were similar for both treatments. Correlation of proteome changes with measurement of Fusarium-damaged kernels, fungal biomass and mycotoxin levels...

  16. [Polyvalence of bacteriophages isolated from fruit trees, affected by bacterial fire blight].

    Science.gov (United States)

    Tovkach, F I; Moroz, S N; Korol', N A; Faĭdiuk, Iu V; Kushkina, A I

    2013-01-01

    Phage populations appearing as a result of a pathogenic process caused by Erwinia amylovora have been discovered and described. They accompany bacterial fire blight development in the process of quince, pear and apple trees vegetation in Zakarpattya region of Ukraine. Phage isolates of the affected pear and quince include polyvalent virulent phages able to develop on bacterial strains associated with plants--E. amylovora. E. "horticola" and Pantoea agglomerans. E. amylovora isolated from the plant tissues affected by the fire blight and detected at the same time as phages proved to be resistant to the viral infection. It is hard to explain now this characteristic however it was noticed that resistance to phages can change drastically in case of dissociation, lysogenization and mutagenesis of erwinia in laboratory conditions. Phage population study shows that they are heterogeneous and can obviously include not only polyvalent but also specific viruses. Further studies of biology and molecular genetics of pure lines of isolated phages will help to get closer to understanding the place and role of bacteriophages in the complicated network of relations between bacterial pathogens and plants. PMID:23720968

  17. Preliminary results on the ability of pentatomidae to transfer fire blight Erwinia amylovora under controlled conditions.

    Science.gov (United States)

    Peusens, G; Schoofs, H; Deckers, T; Belien, T

    2013-01-01

    With their piercing-sucking mouthparts stink bugs (Heteroptera: Pentatomidae), a major pest in especially organic orchards, create wounds in fruit of pear trees. As Erwinia amylovora (Burrill, Winslow et al.), a wide spread bacterial disease affecting many rosaceous plants including pome fruit trees and hawthorn, enters through openings in flowers, leaves, shoots and fruit, feeding punctures caused by these bugs might be inoculated with Erwinia bacteria. In order to investigate the ability of the bugs Pentotoma rufipes L. and Polomena prasina L. to transmit fire blight, insects were caught in an organically managed orchard without fire blight, brought into contact with artificially inoculated immature pear fruit/slices and transferred to healthy, mechanically wounded pear fruit/slices. After an incubation period potential transmission of bacteria was examined by evaluation of symptom expression (necrosis, ooze production). To assess the presence of bacteria on the exoskeleton of the tested bugs, all bugs were forced to walk on a semiselective nutrient agar medium. In another experiment the viability of Ea on the exoskeleton was tested -after previous contact with ooze- through washing and plating of the wash water. All experiments were conducted under optimal climatological conditions and according to quarantine standards. Results demonstrated the ability of stink bugs to transfer E. amylovora to fruit and the viability of bacteria on stink bugs externally - both under lab conditions. PMID:25145257

  18. Development of the variety for resistance against bacterial leaf-blight in rice with thermal neutrons

    International Nuclear Information System (INIS)

    In search for the development of genes for resistance against bacterial leaf-blight in rice, thermal neutrons generated from the Research Reactor at the Kyoto University have been applied to the breeding. In this paper, the developmental outcome is described, and a potential application of thermal neutrons for breeding the variety of resistance against bacterial leaf-blight in rice is reviewed. When thermal neutrons were delivered to the rice, the ratio of absorbed doses by B-10, which is contained in a small quantity in the plant, was found to be larger than expected. This implies characteristic effects of thermal neutrons on the plant. When boric acid was incorporated into the plant before irradiation, the effect of thermal neutrons per irradiation time was considered to become great. The frequency of mutations for resistance was significantly higher by thermal neutron, as compared with that induced by other mutagens, such as gamma radiation, ethylene-imine, ethyl-methane-sulfonate, and nitroso-methyl-urea. Genetic analysis of mutants for resistance revealed recessive genes and polygenes. Finally, the application of thermal neutrons and other radiations would contribute greatly to a resolution of serious pollution problems in global food and environment. (N.K.)

  19. Future prospects for ascochyta blight resistance breeding in cool season food legumes

    Directory of Open Access Journals (Sweden)

    Diego eRubiales

    2012-02-01

    Full Text Available Legume cultivation is strongly hampered by the occurrence of ascochyta blights. Strategies of control have been developed but only marginal successes have been achieved. Breeding for disease resistance is regarded the most cost efficient method of control. Significant genetic variation for disease resistance exists in most legume crops with numerous germplasm lines maintained, providing an excellent resource for plant breeders. Fast and reliable screening methods have been adjusted to fulfil breeding programmes needs. However, the complex inheritance controlled quantitatively by multiple genes, have been difficult to manipulate. Successful application of biotechnology to ascochyta blight resistance breeding in legume crops will facilitate both a good biological knowledge of the crops and of the mechanisms underlying resistance. The current focus in applied breeding is leveraging biotechnological tools to develop more and better markers to speed up the delivery of improved cultivars to the farmer. To date, however, progress in marker development and delivery of useful markers has been slow. The limited saturation of the genomic regions bearing putative QTLs in legume crops makes difficult to identify the most tightly-linked markers

  20. FIRST REPORT OF BLOSSOM BLIGHT OF STRAWBERRY (FRAGARIA X ANANASSA DUCH.) CAUSED BY PSEUDOMONAS MARGINALIS IN CALIFORNIA.

    Science.gov (United States)

    A novel blossom blight was detected in commercial plantings of the strawberry (Fragaria x ananassa Duch.) in 2003 in central coastal California. Koch’s postulates were completed and etiology of the pathogen was determined. Physiological and molecular characterization showed that the pathogen was rel...

  1. Molecular cytogenetic characterization of alien introgressions with gene Fhb3 for resistance to Fusarium head blight disease of wheat

    Science.gov (United States)

    Fusarium head blight (FHB) resistance was identified in the alien species Leymus racemosus, and wheat-Leymus introgression lines with FHB resistance were reported previously. Detailed molecular cytogenetic analysis of alien introgressions T01, T09, and T14 and the mapping of Fhb3, a new gene for FHB...

  2. Isolation and Molecular Characterization of the Fire Blight Pathogen, Erwinia amylovora, Isolated from Apple and Pear Orchards in Egypt

    Directory of Open Access Journals (Sweden)

    Nader A. Ashmawy

    2015-01-01

    Full Text Available Eleven Erwinia amylovora isolates, the causal agent of the fire blight disease, were isolated from apple orchards adjacent to those of pears showing fire blight disease symptoms. Initial characterization concerning morphological and biochemical traits revealed that all isolates were typical to those of E. amylovora. Furthermore, all bacterial isolates showed typical symptoms of the fire blight disease upon infection of unripe pear fruits. Molecular characterization of these isolates via PCR utilizing specific primers based on a region of plasmid pEA29 and chromosomal DNA ams–region was performed. PCR products were positive and represented the expected length 1.1 and 1.6 kb, respectively. Moreover, PCR reactions utilizing the 16S rRNA universal primers were carried out. DNA sequence of PCR products and analysis via blast and Genbank data showed that, the bacterial isolates actually belonging to E. amylovora. Moreover, there are interference between these Erwinia isolates and identified E. amylovora strains based on constructed phylogenetic analysis. To the best of our knowledge this is the first report of fire blight of apples caused by E. amylovora in Egypt.

  3. Mummy Berry Fruit Rot and Shoot Blight Incidence in Blueberry: Prediction, Ranking, and Stability in a Long-term Study

    Science.gov (United States)

    Mummy berry is an important disease of cultivated blueberry. The disease has two distinct phases; a blighting phase initiated by ascospores and a fruit infection stage initiated by conidia. In this study we investigated blueberry cultivar resistance to both phases of the disease and, utilizing ‘stan...

  4. First report of Lasiodiplodia theobromae causing inflorescence blight and fruit rot of longan (Dimocarpus longan L.) in Puerto Rico

    Science.gov (United States)

    Longan is a tropical fruit tree in the Sapindaceae family. During a disease survey from 2008 to 2010, fruit rot and inflorescence blight (rotting of the rachis, rachilla and flowers) were observed at the USDA-ARS Research Farm in Isabela, Puerto Rico. Tissue sections (1 mm2) of diseased inflorescenc...

  5. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations

    Science.gov (United States)

    Rice Sheath Blight (SB) disease, caused by the necrotrophic Rhizoctonia solani Kühn, is a global and annual cause of rice yield losses. Several QTL with small individual impact must be combined to create rice varieties tolerant of SB infection because no single gene confers complete resistance. Mo...

  6. Ascochyta blight of chickpea reduced 38% by application of Aureobasidium pullulans (anamorphic Dothioraceae, Dothideales) to post harvest debris.

    Science.gov (United States)

    In 2004-2005, early winter application of suspensions of Aureobasidium pullulans (AuP) conidia to post-harvest chickpea debris resulted in significantly fewer spring-time Ascochyta blight lesions on chickpea test plants relative to controls. Survival of plants adjacent to treated debris was higher t...

  7. Maryblyt v. 7.1 for Windows: An Improved Fire Blight Forecasting Program for Apples and Pears

    Science.gov (United States)

    This article describes updates found in Version 7.1 of the fire blight prediction model Maryblyt, originally developed by Paul Steiner and Gary Lightner. In addition, a brief history of the development of the Maryblyt model is given. The article ends with examples comparing the performance of Versio...

  8. Efficiacy of bumble bee disseminated biological control agents for control of Botrytis Blossom blight of Rabbiteye Blueberry

    Science.gov (United States)

    Botrytis blossom blight caused by Botrytis cinerea may cause severe crop loss in rabbiteye blueberry, necessitating applications of expensive fungicides. Commercial bumble bees, Bombus impatiens, were tested as vectors of the fungicidal biological control agents (BCAs), Prestop® Gliocladium catenula...

  9. Survival Analysis to Determine the Length of the Incubation Period of Camellia Twig Blight Caused by Colletorichum gloeosporioides

    Science.gov (United States)

    Camellia twig blight, caused by Colletotrichum gloeosporioides, is a prevalent disease problem on several Camellia species in the southern United States. To determine the potential seasonal differences in incubation periods, twelve to sixteen stems of Camellia sasanqua ‘Rosa’ plants grown in pine ba...

  10. Cytogenetic and Molecular Characterization of Durum Alien Disomic Addition Line with Enhanced Tolerance to Fusarium Head Blight Resistance

    Science.gov (United States)

    Fusarium head blight (FHB), or scab, caused by the fungus Fusarium graminearum Schwabe, is a serious disease of durum wheat (Triticum turgidum L., 2n = 4x = 28; AABB genomes). Current durum cultivars have very little or no FHB resistance. A wild relative, diploid wheatgrass Lophopyrum elongatum (Hos...

  11. Isolates of Rhizoctonia solani can produce both web blight and root rot symptoms in common bean (Phaseolus vulgaris L.)

    Science.gov (United States)

    Rhizoctonia solani Kühn (Rs) is an important pathogen in the tropics, causing web blight (WB), and a widespread soil-borne root rot (RR) pathogen of common bean (Phaseolus vulgaris L.) worldwide. This pathogen is a species complex classified into 14 anastomosis groups (AG). Some AGs have been report...

  12. Verification test on an innovated method for the studies on inheritance of resistance to rice sheath blight

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@We have recently developed a systematic method for the study on the inheritance of resistance to sheath blight. The key of the system is an innovated method of inoculation and investigation along with the employment of the permanent population. This paper reported the procedure of the system and the result of its verification.

  13. Fire blight disease reactome: RNA-seq transcriptional profile of apple host plant defense responses to Erwinia amylovora pathogen infection.

    Science.gov (United States)

    Kamber, Tim; Buchmann, Jan P; Pothier, Joël F; Smits, Theo H M; Wicker, Thomas; Duffy, Brion

    2016-01-01

    The molecular basis of resistance and susceptibility of host plants to fire blight, a major disease threat to pome fruit production globally, is largely unknown. RNA-sequencing data from challenged and mock-inoculated flowers were analyzed to assess the susceptible response of apple to the fire blight pathogen Erwinia amylovora. In presence of the pathogen 1,080 transcripts were differentially expressed at 48 h post inoculation. These included putative disease resistance, stress, pathogen related, general metabolic, and phytohormone related genes. Reads, mapped to regions on the apple genome where no genes were assigned, were used to identify potential novel genes and open reading frames. To identify transcripts specifically expressed in response to E. amylovora, RT-PCRs were conducted and compared to the expression patterns of the fire blight biocontrol agent Pantoea vagans strain C9-1, another apple pathogen Pseudomonas syringae pv. papulans, and mock inoculated apple flowers. This led to the identification of a peroxidase superfamily gene that was lower expressed in response to E. amylovora suggesting a potential role in the susceptibility response. Overall, this study provides the first transcriptional profile by RNA-seq of the host plant during fire blight disease and insights into the response of susceptible apple plants to E. amylovora. PMID:26883568

  14. Variability of Different Pear Hybrid Populations in Terms of Hybridization Performance and the Response to Fire Blight (Erwinia amylovora Attack

    Directory of Open Access Journals (Sweden)

    Yasemin EVRENOSOĞLU

    2010-06-01

    Full Text Available The production of pear, which is one of the most important fruits in Turkey, was restricted by the occurrence of the fire blight disease. There isn’t a certain chemical management against fire blight, although plant activators have been used, at present. It’s very important to improve resistant varieties in terms of an integrated management of bacterial diseases. With this purpose, different crosses have been made between resistant cultigens and P. communis varieties that have good fruit characteristics. Besides, self-pollination and open pollination treatments have been carried out in parental plants. Pollen viability and germination ratio, fruit set ratio, total and mean seed number, seed germination ratio, the ratio of hybrid losses by root rot at early stage and the ratio of hybrid losses by natural fire blight infection were determined. The highest values of the properties such as pollen viability and germination ratio, fruit set ratio, mean and total seed number were obtained from the crosses with ‘Kaiser Alexandre’, ‘Ankara’, ‘Akça’, ‘Conference’ and ‘Santa Maria’ cultivars, in general. As a result of natural fire blight infection in Izmir-Turkey conditions, the resistance level of the hybrids from various combinations differed through the cultivars used for cross pollination, and it is very important to evaluate these hybrid pear populations through their response to fireblight disease in terms of obtaining new resistant cultivars and using these populations as disease resistant genetic resources in the future.

  15. Effective marker alleles associated with type II resistance of wheat to Fusarium head blight infection in fields

    Science.gov (United States)

    Molecular markers associated with known quantitative trait loci (QTLs) for type 2 resistance to Fusarium head blight (FHB) in bi-parental mapping populations usually have more than two alleles in breeding populations. Therefore, understanding the association of each allele with FHB response is parti...

  16. Identification of Sheath Blight Resistance QTLs in Rice Using Recombinant Inbred Line Population of Lemont X Jasmine 85

    Science.gov (United States)

    Rice sheath blight (RSB) caused by the soil borne pathogen Rhizoctonia solani, is one of the most destructive diseases of rice around the globe, causing severe losses in rice yield and quality annually. Major gene(s) governing the resistance to RSB have not been found in cultivated rice worldwide...

  17. Potential of osmoadaptation for improving Pantoea agglomerans E325 as biocontrol agent for fire blight of apple and pear

    Science.gov (United States)

    Pantoea agglomerans biocontrol strain E325 is the active ingredient in a commercial product for fire blight, a destructive disease of apple and pear initiated by Erwinia amylovora in flowers. Osmoadaptation, involving the combination of saline osmotic stress and osmolyte amendment to growth media, w...

  18. Survival of Pantoea agglomerans E325 as fire blight biocontrol agent when osmoadapted in high-saline medium

    Science.gov (United States)

    Pantoea agglomerans strain E325 is available commercially as the active ingredient in a freeze-dried product (Bloomtime FDTM) of Northwest Agricultural Products (NAP) for biological control of fire blight. Osmoadaptation, which involves the combination of Pantoea agglomerans strain E325 is available...

  19. Complete Genome Sequence of Japanese Erwinia Strain Ejp617, a Bacterial Shoot Blight Pathogen of Pear ▿

    OpenAIRE

    Park, Duck Hwan; Thapa, Shree Prasad; Choi, Beom-Soon; Kim, Won-Sik; Hur, Jang Hyun; Cho, Jun Mo; Lim, Jong-Sung; Choi, Ik-Young; Lim, Chun Keun

    2010-01-01

    The Japanese Erwinia strain Ejp617 is a plant pathogen that causes bacterial shoot blight of pear in Japan. Here, we report the complete genome sequence of strain Ejp617 isolated from Nashi pears in Japan to provide further valuable insight among related Erwinia species.

  20. Genome-wide association mapping of fusarium head blight resistance in wheat (Triticum aestivum L.) using genotyping by sequencing

    Science.gov (United States)

    Fusarium head blight (FHB) is one of the most important wheat diseases worldwide and host resistance displays complex genetic control. A genome-wide association study (GWAS) was performed on 273 winter wheat breeding lines from the mid-western and eastern regions of the US to identify chromosomal re...

  1. Hyperspectral remote sensing for advanced detection of early blight (Alternaria solani) disease in potato (Solanum tuberosum) plants

    Science.gov (United States)

    Atherton, Daniel

    Early detection of disease and insect infestation within crops and precise application of pesticides can help reduce potential production losses, reduce environmental risk, and reduce the cost of farming. The goal of this study was the advanced detection of early blight (Alternaria solani) in potato (Solanum tuberosum) plants using hyperspectral remote sensing data captured with a handheld spectroradiometer. Hyperspectral reflectance spectra were captured 10 times over five weeks from plants grown to the vegetative and tuber bulking growth stages. The spectra were analyzed using principal component analysis (PCA), spectral change (ratio) analysis, partial least squares (PLS), cluster analysis, and vegetative indices. PCA successfully distinguished more heavily diseased plants from healthy and minimally diseased plants using two principal components. Spectral change (ratio) analysis provided wavelengths (490-510, 640, 665-670, 690, 740-750, and 935 nm) most sensitive to early blight infection followed by ANOVA results indicating a highly significant difference (p < 0.0001) between disease rating group means. In the majority of the experiments, comparisons of diseased plants with healthy plants using Fisher's LSD revealed more heavily diseased plants were significantly different from healthy plants. PLS analysis demonstrated the feasibility of detecting early blight infected plants, finding four optimal factors for raw spectra with the predictor variation explained ranging from 93.4% to 94.6% and the response variation explained ranging from 42.7% to 64.7%. Cluster analysis successfully distinguished healthy plants from all diseased plants except for the most mildly diseased plants, showing clustering analysis was an effective method for detection of early blight. Analysis of the reflectance spectra using the simple ratio (SR) and the normalized difference vegetative index (NDVI) was effective at differentiating all diseased plants from healthy plants, except for the

  2. Effectiveness of a Peptide-rich Fraction from Xenorhabdus budapestensis Culture against Fire Blight Disease on Apple Blossoms

    Directory of Open Access Journals (Sweden)

    Dávid VOZIK

    2015-12-01

    Full Text Available Erwinia amylovora is one of the most frequently occurred plant pathogenic bacterium. It causes necrosis and blight symptoms on host plants and it lead to considerable yield losses throughout the world on apple trees. There is no effective chemical treatment is currently available against fire blight. The purpose of the present study was to search a new, alternative control method. The evaluation of the plant protection potential of an enriched fraction of Xenorhabdus budapestensis cell-free conditioned media was investigated. Purified samples were tested in vitro and in planta against the phytopathogenic bacterium. A reproducible method for isolation of a peptide-rich fraction from Xenorhabdus cell-free conditioned media was established. The process resulted in 400 mg of dry sample prepared from three litres of Xenorhabdus cell culture. Significant correlation was found between the concentration of the purified preparation and the induced inactivation zones against Erwinia amylovora Ea1 in agar diffusion test method. The minimum inhibitory concentration and minimum bactericidal concentration of the purified fraction against Ea1 strain were 8 μg/mL and 16 μg/mL, respectively. In planta experiments were tested on an apple cultivar (‘Watson Jonathan’ susceptible to fire blight. The effective range of concentration was 62-200 µg/mL, while treatment with 300 µg/mL and larger amounts caused necrotic symptoms on the petals of flowers. Current study pointed to the effectiveness of the compounds produced by X. budapestensis against fire blight. The development of a commercially applicable formulation of these compounds would allow growers to effectively control fire blight in apple and pear orchards.

  3. Variations in Disease Resistance of Chestnut Cultivars against Chestnut Blight Fungus, Cryphonectria parasitica

    Institute of Scientific and Technical Information of China (English)

    LEE Sanghyun; KIM Kyunghee; PIAO Chungen; MOON Byungju

    2006-01-01

    Chestnut blight caused by Cryphonectria parasitica is one of the major chestnut diseases occurred on stems and branches. Oriental chestnut has more resistance than American one. Twenty-five cultivars of chestnut tree including various cultivars such as Tsukuba, Okkwang, Rihei, Ginyose, Eunsan, etc. Were tested with a rapid, simple and reliable method. The cultivar Banseki is one of the most resistant cultivars tested and has the necrotic area of 0.40 cm2. However, the necrotic areas of the cultivars of American chestnut, Eunsan, Kwangjujoyul and Eaton, ranges from 3.35 to 2.61 cm2 and these cultivars are relatively susceptible to this pathogen. Many pycnidia of this pathogen were observed on the inner and outer bark tissues after incubating for 3 weeks.

  4. Field and greenhouse inoculation methods for assessment of sheath blight resistance in rice

    Directory of Open Access Journals (Sweden)

    Leila Garcês de Araújo

    2007-01-01

    Full Text Available Field and greenhouse inoculation methods were compared to determine the genetic variation for resistance toRhizoctonia solani in 38 somaclones of rice cultivar Metica-1. Rice plants in pots were inoculated with isolate 4F1 at the ageof sixty four days, with 2.0 g of the fungal culture, multiplied on rice grain and hull medium and placed on the soil surfacearound the plant. The differences among somaclones in relation to lesion height were significant and varied from 6.5 to 15.5cm. In the field trial of artificial inoculation with fungal culture, 52 days after planting, the lesion height varied from 6.2 to 17.7cm. The correlation between disease severity in the greenhouse and the field was positive and highly significant (r=0.44;P< 0.01, indicating the greenhouse inoculation as a safe method for screening germplasm for sheath blight resistance.

  5. The evolution and pathogenic mechanisms of the rice sheath blight pathogen.

    Science.gov (United States)

    Zheng, Aiping; Lin, Runmao; Zhang, Danhua; Qin, Peigang; Xu, Lizhi; Ai, Peng; Ding, Lei; Wang, Yanran; Chen, Yao; Liu, Yao; Sun, Zhigang; Feng, Haitao; Liang, Xiaoxing; Fu, Rongtao; Tang, Changqing; Li, Qiao; Zhang, Jing; Xie, Zelin; Deng, Qiming; Li, Shuangcheng; Wang, Shiquan; Zhu, Jun; Wang, Lingxia; Liu, Huainian; Li, Ping

    2013-01-01

    Rhizoctonia solani is a major fungal pathogen of rice (Oryza sativa L.) that causes great yield losses in all rice-growing regions of the world. Here we report the draft genome sequence of the rice sheath blight disease pathogen, R. solani AG1 IA, assembled using next-generation Illumina Genome Analyser sequencing technologies. The genome encodes a large and diverse set of secreted proteins, enzymes of primary and secondary metabolism, carbohydrate-active enzymes, and transporters, which probably reflect an exclusive necrotrophic lifestyle. We find few repetitive elements, a closer relationship to Agaricomycotina among Basidiomycetes, and expand protein domains and families. Among the 25 candidate pathogen effectors identified according to their functionality and evolution, we validate 3 that trigger crop defence responses; hence we reveal the exclusive expression patterns of the pathogenic determinants during host infection. PMID:23361014

  6. Non-conventional possibilities of protection of apple and pear against fire blight (Erwinia amylovora

    Directory of Open Access Journals (Sweden)

    Piotr Sobiczewski

    2013-12-01

    Full Text Available Standard program of plant protection against fire blight consists of use of management practices and chemical control method. Recently a new, non-conventional possibilities based on application of biocontrol agents (two biopreparations have been already introduced into practice: Bliteban A506 (Pseudomonas fluorescens and BlossomBless (Pantoea agglomerans, plant extracts active against Erwinia amylovora (AkseBio containing extracts from Thymbra spicata and Biomit Plussz with extracts from various plant species and microelements and resistance inducers (Regalis, Bion and plant extracts are of great interest. Also plant transformation with resistance genes such as: hrpN (harpin, dpo (EPS depolymerase and lytic protein genes (attacin E, cecropin SB-37, T4 lysozyme is a promising perspective.

  7. Gene expression analysis during cassava defense response to bacterial blight disease

    Directory of Open Access Journals (Sweden)

    Soto-Suárez Mauricio

    2006-12-01

    Full Text Available Cassava bacterial blight (CBB caused by Xanthomonas axonopodis pv. manihotis (Xam is a destructive disease in the South América and África and yield losses range between 12 and 100%. Cytochemistry and biochemistry of defense response to CBB have been well studied. However, the response of the plant to pathogen attack at the molecular and cellular level remains uncharacterized. Identification of genes associated with defense responses is one of most critical steps leading to the elucidation of disease resistance mechanisms in cassava. In this study, we identified differentially expressed genes during pathogen attack by subtractive hybridization, using the Differential Subtraction Chain method (DSC. A population of cDNA obtained from infected plants was used as ";treatment"; and a population of cDNA obtained from healthy plants was used as ";control";. 1536 clones were isolated from the resistant varieties (MBRA 685 and SG 107-35. Of these, 110 randomly selected clones were sequenced and a homology search was conducted. The sequence analysis showed that 14 cDNA clones shared homology with plant genes involved in defense responses, 70 clones were either homologous to plant genes of unknown function or showed no homology, representing new genes potentially involved in cassava defense responses. A cDNA microarray was constructed by spotting the clones identified from our subtractive libraries. Other clones potentially involved in cassava defense responses were also included. The cassava defense cDNA microarray was used to confirm the differential expression of the clones. Keywords: cassava, bacterial blight, gene expression, subtractive library, microarrays.

  8. ROLE OF EPIDEMIOLOGICAL AND BIOCHEMICAL FACTORS AGAINST EARLY BLIGHT OF POTATO

    Directory of Open Access Journals (Sweden)

    Muhammad Idrees

    2013-04-01

    Full Text Available Epidemiological and biochemical factors play a significant role in early blight disease development in potatoes. For this 29 test cultivars/ lines, were screened, 15 lines including Cardinal and Desiree were found to be very highly susceptible. Eight lines including Diament FSD-White, and TPS-9813 showed highly susceptible response. Two lines i.e. 9802 and 396266-33 were susceptible. Only one variety /advanced line FD-1-8 was found to be resistant. None of the 29 advanced lines was found to be highly resistant while two lines such as FD-3-9 and FD-48-41 were shown moderately resistant response. At varietal level, among 29 test varieties/ advanced lines, all the varieties showed highly significant correlation with minimum temperature and negative correlation with maximum temperature. 18 varieties/advanced lines have significant correlation with pan evaporation. Whereas all the 29 varieties/ advanced lines did not show any correlation with relative humidity and wind speed. Five varieties/ advanced lines namely Cardinal, 396240-181, 9803, FD-1-9 and 9801 were selected to study the relationship of environmental conditions with disease severity. Maximum disease severity was recorded at 17-200C maximum temperature, 6-9oC of minimum air temperature and 1.9-2.4 mm pan evaporation. Relative humidity and wind speed almost had no significant effect on disease severity. On varietal level early blight disease severity had significant correlation with phenolic production both in leaves and tubers. Among 29 varieties, 20 varieties had significant correlation with phenolic production while 9 had no correlation in case of leaves while in case of tubers 19 varieties/ lines showed significant correlation & 10 lines did not show any correlation with phenolics production. 

  9. Differential expression of biphenyl synthase gene family members in fire-blight-infected apple 'Holsteiner Cox'.

    Science.gov (United States)

    Chizzali, Cornelia; Gaid, Mariam M; Belkheir, Asma K; Hänsch, Robert; Richter, Klaus; Flachowsky, Henryk; Peil, Andreas; Hanke, Magda-Viola; Liu, Benye; Beerhues, Ludger

    2012-02-01

    Fire blight, caused by the bacterium Erwinia amylovora, is a devastating disease of apple (Malus × domestica). The phytoalexins of apple are biphenyls and dibenzofurans, whose carbon skeleton is formed by biphenyl synthase (BIS), a type III polyketide synthase. In the recently published genome sequence of apple 'Golden Delicious', nine BIS genes and four BIS gene fragments were detected. The nine genes fall into four subfamilies, referred to as MdBIS1 to MdBIS4. In a phylogenetic tree, the BIS amino acid sequences from apple and Sorbus aucuparia formed an individual cluster within the clade of the functionally diverse type III polyketide synthases. cDNAs encoding MdBIS1 to MdBIS4 were cloned from fire-blight-infected shoots of apple 'Holsteiner Cox,' heterologously expressed in Escherichia coli, and functionally analyzed. Benzoyl-coenzyme A and salicoyl-coenzyme A were the preferred starter substrates. In response to inoculation with E. amylovora, the BIS3 gene was expressed in stems of cv Holsteiner Cox, with highest transcript levels in the transition zone between necrotic and healthy tissues. The transition zone was the accumulation site of biphenyl and dibenzofuran phytoalexins. Leaves contained transcripts for BIS2 but failed to form immunodetectable amounts of BIS protein. In cell cultures of apple 'Cox Orange,' expression of the BIS1 to BIS3 genes was observed after the addition of an autoclaved E. amylovora suspension. Using immunofluorescence localization under a confocal laser-scanning microscope, the BIS3 protein in the transition zone of stems was detected in the parenchyma of the bark. Dot-shaped immunofluorescence was confined to the junctions between neighboring cortical parenchyma cells. PMID:22158676

  10. Evaluation of Susceptibility of Different Pear Hybrid Populations to Fire Blight (Erwinia amylovora

    Directory of Open Access Journals (Sweden)

    Yasemin EVRENOSOĞLU

    2011-05-01

    Full Text Available Fire blight disease caused by pathogenic bacterium Erwinia amylovora, is the serious disease of pear, and there is not a certain chemical management against this disease except antibiotic-type compounds such as streptomycin. It is very important to improve new fire blight resistant cultivars in case of integrated disease management. With this purpose, different crosses have been made between Pyrus communis varieties that have good fruit characteristics and resistant cultigens. Besides, self and open pollination treatments have been carried out in maternal plants. The disease resistance level of the hybrids obtained from these combinations was determined by artificial inoculations by Erwinia amylovora in greenhouse conditions. A total of 3284 hybrids were inoculated, and 2631 of them survived and were distributed to different susceptibility classes. 19.88% of the inoculated hybrids was killed by Erwinia amylovora. Total distribution of the hybrids to susceptibility classes was as 6.18% in class “A- slightly susceptible”, 3.11% in class “B- less susceptible”, 8.89% in class “C- mid-susceptible”, 20.28% in class “D- susceptible”, and 61.54% in class “E- very susceptible”. Majority of class “A- slightly susceptible” hybrids were obtained from ‘Magness’ x ‘Ankara’ combination. ‘Kieffer’ x ‘Santa Maria’, ‘Kieffer’ open pollination, ‘Magness’ x ‘Akça’, ‘Magness’ x ‘Kieffer’, ‘Magness’ x ‘Santa Maria’, ‘Mustafa Bey’ x ‘Moonglow’ treatments displayed good results with respect to “A- slightly susceptible” character. It is very important to evaluate these hybrid pear populations through different fruit and tree characteristics in the future.

  11. Late-term abortion.

    Science.gov (United States)

    Epner, J E; Jonas, H S; Seckinger, D L

    1998-08-26

    Recent proposed federal legislation banning certain abortion procedures, particularly intact dilatation and extraction, would modify the US Criminal Code such that physicians performing these procedures would be liable for monetary and statutory damages. Clarification of medical procedures is important because some of the procedures used to induce abortion prior to viability are identical or similar to postviability procedures. This article reviews the scientific and medical information on late-term abortion and late-term abortion techniques and includes data on the prevalence of late-term abortion, abortion-related mortality and morbidity rates, and legal issues regarding fetal viability and the balance of maternal and fetal interests. According to enacted American Medical Association (AMA) policy, the use of appropriate medical terminology is critical in defining late-term abortion procedures, particularly intact dilatation and extraction, which is a variant of but distinct from dilatation and evacuation. The AMA recommends that the intact dilatation and extraction procedure not be used unless alternative procedures pose materially greater risk to the woman and that abortions not be performed in the third trimester except in cases of serious fetal anomalies incompatible with life. Major medical societies are urged to collaborate on clinical guidelines on late-term abortion techniques and circumstances that conform to standards of good medical practice. More research on the advantages and disadvantages of specific abortion procedures would help physicians make informed choices about specific abortion procedures. Expanded ongoing data surveillance systems estimating the prevalence of abortion are also needed. PMID:9728645

  12. Fire Blight Control: The Struggle Goes On. A Comparison of Different Fire Blight Control Methods in Switzerland with Respect to Biosafety, Efficacy and Durability.

    Science.gov (United States)

    Gusberti, Michele; Klemm, Urs; Meier, Matthias S; Maurhofer, Monika; Hunger-Glaser, Isabel

    2015-09-01

    Fire blight (FB), caused by Erwinia amylovora, is one of the most important pome fruit pathogens worldwide. To control this devastating disease, various chemical and biological treatments are commonly applied in Switzerland, but they fail to keep the infection at an acceptable level in years of heavy disease pressure. The Swiss authorities therefore currently allow the controlled use of the antibiotic streptomycin against FB in years that are predicted to have heavy infection periods, but only one treatment per season is permitted. Another strategy for controlling Erwinia is to breed resistant/tolerant apple cultivars. One way of accelerating the breeding process is to obtain resistant cultivars by inserting one or several major resistance genes, using genetic engineering. To date, no study summarizing the impact of different FB control measures on the environment and on human health has been performed. This study consequently aims to compare different disease-control measures (biological control, chemical control, control by antibiotics and by resistant/tolerant apple cultivars obtained through conventional or molecular breeding) applied against E. amylovora, considering different protection goals (protection of human health, environment, agricultural diversity and economic interest), with special emphasis on biosafety aspects. Information on each FB control measure in relation to the specified protection goal was assessed by literature searches and by interviews with experts. Based on our results it can be concluded that the FB control measures currently applied in Switzerland are safe for consumers, workers and the environment. However, there are several gaps in our knowledge of the human health and environmental impacts analyzed: data are missing (1) on long term studies on the efficacy of most of the analyzed FB control measures; (2) on the safety of operators handling streptomycin; (3) on residue analyses of Equisetum plant extract, the copper and aluminum

  13. Late onset endophthalmitis

    Directory of Open Access Journals (Sweden)

    Abdulaziz AlHadlaq

    2016-04-01

    Full Text Available We report an extremely rare presentation of late-onset endophthalmitis in a young adult patient with an unexposed Ahmed tube implant. The implant was inserted 11 years prior to presentation. There was no history of trauma or any obvious exposure on clinical examination and the tube plate was filled with purulent material. After aqueous and vitreous tap, the patient underwent intracameral, intravitreal subconjunctival antibiotic injections and was started on systemic antibiotics with good response. Endophthalmitis associated with tube drainage device can present as late as 11 years and even without an unexposed tube.

  14. Hyperspectral remote sensing for advanced detection of early blight (Alternaria solani) disease in potato (Solanum tuberosum) plants

    Science.gov (United States)

    Atherton, Daniel

    Early detection of disease and insect infestation within crops and precise application of pesticides can help reduce potential production losses, reduce environmental risk, and reduce the cost of farming. The goal of this study was the advanced detection of early blight (Alternaria solani) in potato (Solanum tuberosum) plants using hyperspectral remote sensing data captured with a handheld spectroradiometer. Hyperspectral reflectance spectra were captured 10 times over five weeks from plants grown to the vegetative and tuber bulking growth stages. The spectra were analyzed using principal component analysis (PCA), spectral change (ratio) analysis, partial least squares (PLS), cluster analysis, and vegetative indices. PCA successfully distinguished more heavily diseased plants from healthy and minimally diseased plants using two principal components. Spectral change (ratio) analysis provided wavelengths (490-510, 640, 665-670, 690, 740-750, and 935 nm) most sensitive to early blight infection followed by ANOVA results indicating a highly significant difference (p potato plants.

  15. Induction of bacterial blight resistance in elite Indian rice cultivars using gamma-rays and ethyl methanesulfonate

    International Nuclear Information System (INIS)

    Rice is the most important cereal crop in the world feeding more than 50 percent of the human population. During the last 30 years, induced mutation breeding has played a significant role in rice breeding programmes. Rice mutants with higher yield, greater tolerance to diseases and pests and other agronomic qualities have been released for commercial cultivation in many countries. Bacterial blight (BB) caused by Xanthomonas oryzae pv. oryzae is the second important disease in Southeast Asia. In the Basmati field sometime the yield loss is up to 100%. Moreover, there is no resistance source available. In Basmati rice, which is known for its quality and aroma. Induction of bacterial blight resistance in Basmati will help in developing high yielding Basmati type cultivars without compromising the quality

  16. Potent and specific bactericidal effect of juglone (5-hydroxy-1,4-naphthoquinone) on the fire blight pathogen Erwinia amylovora.

    Science.gov (United States)

    Fischer, Thilo Christopher; Gosch, Christian; Mirbeth, Beate; Gselmann, Markus; Thallmair, Veronika; Stich, Karl

    2012-12-12

    A screening of plant quinones for inhibiting effects on the bacterial fire blight pathogen Erwinia amylovora was performed. The most active compound, juglone from walnuts, has a potent and specific bactericidal effect on E. amylovora and minimal inhibitory concentrations of only 2.5-10 μM, with stronger effects at lower, but still physiological, pH values. In vitro tests with juglone and inoculated flowers of apple (Malus domestica) showed an efficacy of 67% in preventing infection. In two years of field tests juglone had variable degrees of efficacy ranging from 40 to 82%, seemingly due to environmental conditions. A phytotoxic reaction to juglone, which is known for its allelopathic effect on plants, was restricted to browning of petals; later fruit russeting was not observed. Juglone is a promising candidate for the development of a new environmentally friendly plant protectant to replace the antibiotic streptomycin currently used in fire blight control. PMID:23163769

  17. Transfer of bacterial blight resistance from Oryza meyeriana to O.Sativa L.by asymmetric somatic hybridization

    Institute of Scientific and Technical Information of China (English)

    ZHU Yongsheng; CHEN Baotang; YU Shunwu; ZHANG Duanpin; ZHANG Xueqin; YAN Qiusheng

    2004-01-01

    Asymmetric somatic hybrid plants were produced between cultivated rice (Oryza sativa L.) and wild species [O. Meyeriana (Zoll. etMor, exSteud.)] with high resistance to rice bacterial blight. X-ray-irradiated protoplasts of the wild species were used as donor and chemically fused with iodoacetamide-inactivated protoplasts of rice cv. 02428to produce hybrids. Seventy-two plants were regenerated from 623 calli based on metabolic complementation. The morphological characters of the plants closely resembled that of the rice. Simple sequence repeats were employed to identify their hybridity. Cytological analysis of root-tips revealed that their chromosome number varied in the range of 27-38. The somatic hybrids were inoculated with strains of Xanthamonas oryzae pv. Oryzae at adult growth stage and demonstrated the resistance to bacterial blight introgression from the O. Meyeriana.

  18. Transcriptome analysis of root response to citrus blight based on the newly assembled Swingle citrumelo draft genome

    OpenAIRE

    Zhang, Yunzeng; Barthe, Gary; Grosser, Jude W.; Wang, Nian

    2016-01-01

    Background Citrus blight is a citrus tree overall decline disease and causes serious losses in the citrus industry worldwide. Although it was described more than one hundred years ago, its causal agent remains unknown and its pathophysiology is not well determined, which hampers our understanding of the disease and design of suitable disease management. Results In this study, we sequenced and assembled the draft genome for Swingle citrumelo, one important citrus rootstock. The draft genome is...

  19. Controlling Botrytis elliptica Leaf Blight on Hybrid Lilies through the Application of Convergent Chemical X-ray Irradiation

    Directory of Open Access Journals (Sweden)

    Sung-Jun Hong

    2016-04-01

    Full Text Available X-ray irradiation with convergent chemicals such as nano-silver particles or sodium dichloroisocyanurate (NaDCC has been used to control leaf blight on cut lilies. The oriental hybrid lily cultivars Siberia, Le Reve, and Sorbonne were irradiated five times by 200 Gy of X-rays in 2014. In 2015, Siberia and Sorbonne were irradiated three times by 150 Gy of X-rays. After artificial infection with Botrytis elliptica on the leaves and petals of cut lilies, this study used convergent chemical X-ray irradiation of 200 Gy or 150 Gy. Leaf and petal blight was measured in terms of incidence and severity at 8 days after infection using total 552 cuttings. Results indicate that the treatments of X-ray irradiation and NaDCC in 2014 and 2015 slightly decreased the severity of petal blight on Siberia and Sorbonne. However, the results were not significant and severity did not decrease as NaDCC concentration increased. Vase-life was observed separately after X-ray irradiation of 270 cut lilies in 2014 and 108 cut lilies in 2015. Chlorophyll content was not affected by either 200 Gy or 150 Gy of X-rays. The number of days of fully opened flowers at Siberia of 150 Gy and Le Revu of 200 Gy increased by 1–2 days. In addition, the relative fresh weights of the X-rayed flowers were 10% drier than the non-irradiated controls. Overall, leaf blight control by X-ray was inferior to the control by gamma rays, and petal color was bleached in Sorbonne and Le Reve cvs. by 150 Gy of X-rays.

  20. Draft Whole-Genome Sequence of Trichoderma gamsii T6085, a Promising Biocontrol Agent of Fusarium Head Blight on Wheat.

    Science.gov (United States)

    Baroncelli, Riccardo; Zapparata, Antonio; Piaggeschi, Giulia; Sarrocco, Sabrina; Vannacci, Giovanni

    2016-01-01

    Trichoderma gamsii T6085 is a promising beneficial isolate whose effects consist of growth inhibition of the main agents causing Fusarium head blight, reduction of mycotoxin accumulation, competition for wheat debris, and reduction of the disease in both the lab and the field. Here, we present the first genome assembly of a T. gamsii isolate, providing a useful platform for the scientific community. PMID:26893428

  1. Controlling Botrytis elliptica Leaf Blight on Hybrid Lilies through the Application of Convergent Chemical X-ray Irradiation

    Science.gov (United States)

    Hong, Sung-Jun; Koo, Tae-Hoon; Yun, Sung-Chul

    2016-01-01

    X-ray irradiation with convergent chemicals such as nano-silver particles or sodium dichloroisocyanurate (NaDCC) has been used to control leaf blight on cut lilies. The oriental hybrid lily cultivars Siberia, Le Reve, and Sorbonne were irradiated five times by 200 Gy of X-rays in 2014. In 2015, Siberia and Sorbonne were irradiated three times by 150 Gy of X-rays. After artificial infection with Botrytis elliptica on the leaves and petals of cut lilies, this study used convergent chemical X-ray irradiation of 200 Gy or 150 Gy. Leaf and petal blight was measured in terms of incidence and severity at 8 days after infection using total 552 cuttings. Results indicate that the treatments of X-ray irradiation and NaDCC in 2014 and 2015 slightly decreased the severity of petal blight on Siberia and Sorbonne. However, the results were not significant and severity did not decrease as NaDCC concentration increased. Vase-life was observed separately after X-ray irradiation of 270 cut lilies in 2014 and 108 cut lilies in 2015. Chlorophyll content was not affected by either 200 Gy or 150 Gy of X-rays. The number of days of fully opened flowers at Siberia of 150 Gy and Le Revu of 200 Gy increased by 1–2 days. In addition, the relative fresh weights of the X-rayed flowers were 10% drier than the non-irradiated controls. Overall, leaf blight control by X-ray was inferior to the control by gamma rays, and petal color was bleached in Sorbonne and Le Reve cvs. by 150 Gy of X-rays. PMID:27147927

  2. EVALUATION OF DISEASE RESISTANCE POTENTIAL OF SEVEN POTATO GENOTYPES AGAINST EARLY BLIGHT CAUSED BY Alternaria tenuissima UNDER GREENHOUSE CONDITIONS

    OpenAIRE

    Hamid Reza Mirkarimi; Ahmad Abasi Moghadam; Javad Mozafari

    2013-01-01

    Early blight of potato was caused by various species of genus Alternaria, the disease has a prominent role in reducing crop yields in most of the countries, especially in Iran. Various studies has been conducted for the finding out the information regarding the diversity of pathogen and estimation of damage caused by genus Alternaria tenuissima in Iran, but the information regarding the resistance against this fungal pathogen in various genotype of potatoes are in scarcity. Seven isolat...

  3. Incidence and etiology of maize seedling blight and control of soil borne pathogens using seed treatments / Johnny Viviers

    OpenAIRE

    Viviers, Johnny

    2014-01-01

    Seedling blight of maize has significantly influenced field crop stands and seedling vigour over various localities and seasons. The extent of the problem is influenced by a number of factors which includes soil temperature (generally below 13 °C), waterlogged soils, inadequate fertilization, herbicide damage and fungal pathogens. The fungi generally causing seedling damping off are often involved in a complex and succession over time varying in importance depending on the field circumstances...

  4. Controlling Botrytis elliptica Leaf Blight on Hybrid Lilies through the Application of Convergent Chemical X-ray Irradiation.

    Science.gov (United States)

    Hong, Sung-Jun; Koo, Tae-Hoon; Yun, Sung-Chul

    2016-04-01

    X-ray irradiation with convergent chemicals such as nano-silver particles or sodium dichloroisocyanurate (NaDCC) has been used to control leaf blight on cut lilies. The oriental hybrid lily cultivars Siberia, Le Reve, and Sorbonne were irradiated five times by 200 Gy of X-rays in 2014. In 2015, Siberia and Sorbonne were irradiated three times by 150 Gy of X-rays. After artificial infection with Botrytis elliptica on the leaves and petals of cut lilies, this study used convergent chemical X-ray irradiation of 200 Gy or 150 Gy. Leaf and petal blight was measured in terms of incidence and severity at 8 days after infection using total 552 cuttings. Results indicate that the treatments of X-ray irradiation and NaDCC in 2014 and 2015 slightly decreased the severity of petal blight on Siberia and Sorbonne. However, the results were not significant and severity did not decrease as NaDCC concentration increased. Vase-life was observed separately after X-ray irradiation of 270 cut lilies in 2014 and 108 cut lilies in 2015. Chlorophyll content was not affected by either 200 Gy or 150 Gy of X-rays. The number of days of fully opened flowers at Siberia of 150 Gy and Le Revu of 200 Gy increased by 1-2 days. In addition, the relative fresh weights of the X-rayed flowers were 10% drier than the non-irradiated controls. Overall, leaf blight control by X-ray was inferior to the control by gamma rays, and petal color was bleached in Sorbonne and Le Reve cvs. by 150 Gy of X-rays. PMID:27147927

  5. A cytoplasmically transmissible hypovirulence phenotype associated with mitochondrial DNA mutations in the chestnut blight fungus Cryphonectria parasitica.

    OpenAIRE

    Monteiro-Vitorello, C B; Bell, J. A.; Fulbright, D W; Bertrand, H

    1995-01-01

    Mutations causing mitochondrial defects were induced in a virulent strain of the chestnut blight fungus Cryphonectria parasitica (Murr.) Barr. Virulence on apples and chestnut trees was reduced in four of six extensively characterized mutants. Relative to the virulent progenitor, the attenuated mutants had reduced growth rates, abnormal colony morphologies, and few asexual spores, and they resembled virus-infected strains. The respiratory defects and attenuated virulence phenotypes (hypovirul...

  6. Cloning of a peroxidase gene from cassava with potential as a molecular marker for resistance to bacterial blight

    OpenAIRE

    Luiz Filipe Pereira; Goodwin, Paul H.; Larry Erickson

    2003-01-01

    Cassava bacterial blight (CBB), caused by Xanthomonas axonopodis pv. manihotis, is considered one of the most important bacterial diseases of cassava (Manihot esculenta Crantz). In order to characterize the cassava genes involved in resistance to this disease, a genomic clone of a cationic peroxidase gene, MEPX1, was isolated by PCR from cassava cultivar MCOL 22. The DNA sequence of MEPX1 showed high homology with other plant peroxidase genes and contained a large intron typical of peroxidase...

  7. Differential transcriptomic responses to Fusarium graminearum infection in two barley quantitative trait loci associated with Fusarium head blight resistance

    OpenAIRE

    Huang, Yadong; Li, Lin; Smith, Kevin P.; Muehlbauer, Gary J.

    2016-01-01

    Background Fusarium graminearum causes Fusarium head blight (FHB), a major disease problem worldwide. Resistance to FHB is controlled by quantitative trait loci (QTL) of which two are located on barley chromosomes 2H bin8 and 6H bin7. The mechanisms of resistance mediated by FHB QTL are poorly defined. Results Near-isogenic lines (NILs) carrying Chevron-derived resistant alleles for the two QTL were developed and exhibited FHB resistance in field trials. To understand the molecular responses ...

  8. INTEGRATED MANAGEMENT OF LEAF BLIGHT OF Etlingera linguiformis (Roxb.) R. M. Smith CAUSED BY FUNGAL PATHOGEN Curvularia lunata var. aeria

    OpenAIRE

    Chijamo Kithan; L Daiho

    2014-01-01

    A field study was conducted for screening the efficacy of various management practices against Curvularia lunata var. aeria fungal pathogen. In present study, screening of four fungicides, two botanicals, three bio-agents, two cultural and one physical management practices were carried out for the management of Curvularia leaf blight of Etlingera linguiformis. The results of study revealed that among the fungicides, treatment containing rhizome treatment + foliar spray with me...

  9. Sources of resistance in chickpea (cicer arietinum l.) land races against ascochyta rabiei causal agent of ascochyta blight disease

    International Nuclear Information System (INIS)

    Ascochyta blight disease, caused by the fungus Ascochyta rabiei, is a major yield limiting factor of chickpea in Turkey and around the world. This study was conducted to identify sources of genetic resistance against chickpea blight caused by Ascochyta rabiei. For this purpose, 68 chickpea land races of different origins were evaluated in both field and growth chamber conditions during 2008-2009 growing seassons. Two standard cultivars were used as a reference, Inci (resistant) and Canitez (susceptible). Disease severity scoring was conducted on a 1-9 rating scale 21 days after inoculation in growth chamber test and at flowering and pot filling stages in field tests. Analysis of variance (ANOVA) test showed a significant difference among the chickpea landraces in ascochyta blight resistance at p<0.05. None of the chickpea land races was highly resistant to the pathogen in growth chamber and field conditions. Only two landraces (10A and 28B) were moderately resistant to the disease. Some of the landraces resulted in a particular plant to exhibit no disease symptoms, indicating that the variation within chickpea land races was high. Therefore, seeds of this plant were harvested separately and preserved for further evaluations. (author)

  10. Potential for the integration of biological and chemical control of sheath blight disease caused by Rhizoctonia solani on rice.

    Science.gov (United States)

    Boukaew, Sawai; Klinmanee, Chanasirin; Prasertsan, Poonsuk

    2013-10-01

    Biological control using antagonistic microbes to minimize the use of chemical pesticides has recently become more prevalent. In an attempt to find an integrated control system for sheath blight, caused by Rhizoctonia solani in rice, Streptomyces philanthi RM-1-138, commercial formulations of Bacillus subtilis as Larminar® and B. subtilis strain NSRS 89-24+MK-007 as Biobest® and chemical fungicides including carbendazim®, validamycin®, propiconazole® and mancozeb® were applied alone and in combination with S. philanthi RM-1-138. In vitro experiments showed that all treatments tested did provide some control against mycelial growth and sclerotia production by R. solani PTRRS-9. In addition, the four chemical fungicides had no detrimental effects on S. philanthi RM-1-138 even at high concentrations (up to 100 μg/ml). The efficacy of S. philanthi RM-1-138, the commercial formulations of B. subtilis, chemical fungicides alone or in combination with S. philanthi RM-1-138 was also tested in a greenhouse experiment against sheath blight disease on rice plants. All treatments showed some protection of rice for sheath blight by 47-60 % when carbendazim® was applied alone and up to 74 % when combined with S. philanthi RM-1-138. PMID:23653261

  11. Control of plant defense mechanisms and fire blight pathogenesis through the regulation of 6-thioguanine biosynthesis in Erwinia amylovora.

    Science.gov (United States)

    Coyne, Sébastien; Litomska, Agnieszka; Chizzali, Cornelia; Khalil, Mohammed N A; Richter, Klaus; Beerhues, Ludger; Hertweck, Christian

    2014-02-10

    Fire blight is a devastating disease of Rosaceae plants, such as apple and pear trees. It is characterized by necrosis of plant tissue, caused by the phytopathogenic bacterium Erwinia amylovora. The plant pathogen produces the well-known antimetabolite 6-thioguanine (6TG), which plays a key role in fire blight pathogenesis. Here we report that YcfR, a member of the LTTR family, is a major regulator of 6TG biosynthesis in E. amylovora. Inactivation of the regulator gene (ycfR) led to dramatically decreased 6TG production. Infection assays with apple plants (Malus domestica cultivar Holsteiner Cox) and cell cultures of Sorbus aucuparia (mountain ash, rowan) revealed abortive fire blight pathogenesis and reduced plant response (biphenyl and dibenzofuran phytoalexin production). In the presence of the ΔycfR mutant, apple trees were capable of activating the abscission machinery to remove infected tissue. In addition to unveiling the regulation of 6TG biosynthesis in a major plant pathogen, we demonstrate for the first time that this antimetabolite plays a pivotal role in dysregulating the plant response to infection. PMID:24449489

  12. Late Embryogenesis Abundant Proteins

    NARCIS (Netherlands)

    Shih, M.D.; Hoekstra, F.A.; Hsing, Y.I.C.

    2008-01-01

    During the late maturation stage of seed development, water content decreases greatly. One of the most striking characteristics of mature orthodox seeds is their ability to withstand severe desiccation. Mechanisms of plant drought/desiccation tolerance have been studied by numerous groups, and a bro

  13. Big Java late objects

    CERN Document Server

    Horstmann, Cay S

    2012-01-01

    Big Java: Late Objects is a comprehensive introduction to Java and computer programming, which focuses on the principles of programming, software engineering, and effective learning. It is designed for a two-semester first course in programming for computer science students.

  14. Paleoecological and climatic implications of stable isotope results from late Pleistocene bone collagen, Ziegeleigrube Coenen, Germany

    Science.gov (United States)

    Wißing, Christoph; Matzerath, Simon; Turner, Elaine; Bocherens, Hervé

    2015-07-01

    Climatic and ecological conditions during Marine Oxygen Isotope Stage (MIS) 3 are complex and the impact of cold spells on the ecosystems in Central Europe still needs to be investigated thoroughly. Ziegeleigrube Coenen (ZC) is a late Pleistocene MIS 3 locality in the Lower Rhine Embayment of Germany, radiocarbon-dated to > 34 14C ka BP. The site yielded a broad spectrum of mammal species. We investigated the carbon (δ13C), nitrogen (δ15N) and sulfur (δ34S) isotope signatures of bone collagen, since these are valuable tools in characterizing ecological niches, environmental conditions and aspects of climate and mobility. By comparison with pre- and post-Last Glacial Maximum (LGM) sites in Central Europe we show that ZC belongs in a cold event of MIS 3 and was climatically more similar to post-LGM sites than to pre-LGM sites. However, the trophic structure resembled that of typical pre-LGM sites in Belgium. This cold event in MIS 3 changed the bottom of the foodweb, but do not seem to have had a direct impact on the occurrence of the mammalian species and their ecological distribution. Apparently the (mega-) faunal community could adapt also to harsher environmental conditions during MIS 3.

  15. Control of fire blight (Erwinia amylovora on apple trees with trunk-injected plant resistance inducers and antibiotics and assessment of induction of pathogenesis-related protein genes

    Directory of Open Access Journals (Sweden)

    Srđan G. Aćimović

    2015-02-01

    Full Text Available Management of fire blight is complicated by limitations on use of antibiotics in agriculture, antibiotic resistance development, and limited efficacy of alternative control agents. Even though successful in control, preventive antibiotic sprays also affect non-target bacteria, aiding the selection for resistance which could ultimately be transferred to the pathogen Erwinia amylovora. Trunk injection is a target-precise pesticide delivery method that utilizes tree xylem to distribute injected compounds. Trunk injection could decrease antibiotic usage in the open environment and increase the effectiveness of compounds in fire blight control. In field experiments, after 1-2 apple tree injections of either streptomycin, potassium phosphites (PH or acibenzolar-S-methyl (ASM, significant reduction of blossom and shoot blight symptoms was observed compared to water- or non-injected control trees. Overall disease suppression with streptomycin was lower than typically observed following spray applications to flowers. Trunk injection of oxytetracycline resulted in excellent control of shoot blight severity, suggesting that injection is a superior delivery method for this antibiotic. Injection of both ASM and PH resulted in the significant induction of PR-1, PR-2 and PR-8 protein genes in apple leaves indicating induction of systemic acquired resistance (SAR under field conditions. The time separating SAR induction and fire blight symptom suppression indicated that various defensive compounds within the SAR response were synthesized and accumulated in the canopy. ASM and PH suppressed fire blight even after cessation of induced gene expression. With the development of injectable formulations and optimization of doses and injection schedules, the injection of protective compounds could serve as an effective option for fire blight control.

  16. Control of fire blight (Erwinia amylovora) on apple trees with trunk-injected plant resistance inducers and antibiotics and assessment of induction of pathogenesis-related protein genes.

    Science.gov (United States)

    Aćimović, Srđan G; Zeng, Quan; McGhee, Gayle C; Sundin, George W; Wise, John C

    2015-01-01

    Management of fire blight is complicated by limitations on use of antibiotics in agriculture, antibiotic resistance development, and limited efficacy of alternative control agents. Even though successful in control, preventive antibiotic sprays also affect non-target bacteria, aiding the selection for resistance which could ultimately be transferred to the pathogen Erwinia amylovora. Trunk injection is a target-precise pesticide delivery method that utilizes tree xylem to distribute injected compounds. Trunk injection could decrease antibiotic usage in the open environment and increase the effectiveness of compounds in fire blight control. In field experiments, after 1-2 apple tree injections of either streptomycin, potassium phosphites (PH), or acibenzolar-S-methyl (ASM), significant reduction of blossom and shoot blight symptoms was observed compared to water injected control trees. Overall disease suppression with streptomycin was lower than typically observed following spray applications to flowers. Trunk injection of oxytetracycline resulted in excellent control of shoot blight severity, suggesting that injection is a superior delivery method for this antibiotic. Injection of both ASM and PH resulted in the significant induction of PR-1, PR-2, and PR-8 protein genes in apple leaves indicating induction of systemic acquired resistance (SAR) under field conditions. The time separating SAR induction and fire blight symptom suppression indicated that various defensive compounds within the SAR response were synthesized and accumulated in the canopy. ASM and PH suppressed fire blight even after cessation of induced gene expression. With the development of injectable formulations and optimization of doses and injection schedules, the injection of protective compounds could serve as an effective option for fire blight control. PMID:25717330

  17. A BROAD-SPECTRUM ANTAGONISTIC ACTIVITY OF THE BIOCONTROL AGENT PSEUDOMONAS SYNXANTHA BG33R

    Science.gov (United States)

    Pseudomonas synxantha strain BG33R was previously reported to be effective in controlling the Peach Tree Short Life (PTSL) syndrome by suppressing the ring nematode (Mesocriconema xenoplax) through terminating the eggs of the second juvenile stage from further development. In this research the spec...

  18. Characterization of broad-spectrum antibiotic resistance genes in wastewater treatment reactors through metagenomic approaches

    OpenAIRE

    Yang, Ying; 楊穎

    2014-01-01

    The spread of antibiotic resistant bacteria (ARB) and antibiotic resistance genes (ARGs) have attracted great concerns worldwide. Wastewater treatment plants (WWTPs) are reservoirs of ARGs while wastewater/sludge treatment processes are considered as important means to control these emerging biological pollutants. However, the full profiles of ARGs in WWTPs or the removal efficiency of ARGs by wastewater/sludge treatment process was not well characterized yet. Thus, the major tasks in this st...

  19. Rational design of berberine-based FtsZ inhibitors with broad-spectrum antibacterial activity.

    Directory of Open Access Journals (Sweden)

    Ning Sun

    Full Text Available Inhibition of the functional activity of Filamenting temperature-sensitive mutant Z (FtsZ protein, an essential and highly conserved bacterial cytokinesis protein, is a promising approach for the development of a new class of antibacterial agents. Berberine, a benzylisoquinoline alkaloid widely used in traditional Chinese and native American medicines for its antimicrobial properties, has been recently reported to inhibit FtsZ. Using a combination of in silico structure-based design and in vitro biological assays, 9-phenoxyalkyl berberine derivatives were identified as potent FtsZ inhibitors. Compared to the parent compound berberine, the derivatives showed a significant enhancement of antibacterial activity against clinically relevant bacteria, and an improved potency against the GTPase activity and polymerization of FtsZ. The most potent compound 2 strongly inhibited the proliferation of Gram-positive bacteria, including methicillin-resistant S. aureus and vancomycin-resistant E. faecium, with MIC values between 2 and 4 µg/mL, and was active against the Gram-negative E. coli and K. pneumoniae, with MIC values of 32 and 64 µg/mL respectively. The compound perturbed the formation of cytokinetic Z-ring in E. coli. Also, the compound interfered with in vitro polymerization of S. aureus FtsZ. Taken together, the chemical modification of berberine with 9-phenoxyalkyl substituent groups greatly improved the antibacterial activity via targeting FtsZ.

  20. Novel polyomavirus detected in the feces of a chimpanzee by nested broad-spectrum PCR.

    Science.gov (United States)

    Johne, Reimar; Enderlein, Dirk; Nieper, Hermann; Müller, Hermann

    2005-03-01

    In order to screen for new polyomaviruses in samples derived from various animal species, degenerated PCR primer pairs were constructed. By using a nested PCR protocol, the sensitive detection of nine different polyomavirus genomes was demonstrated. The screening of field samples revealed the presence of a new polyomavirus, tentatively designated chimpanzee polyomavirus (ChPyV), in the feces of a juvenile chimpanzee (Pan troglodytes). Analysis of the region encoding the major capsid protein VP1 revealed a unique insertion in the EF loop of the protein and showed that ChPyV is a distinct virus related to the monkey polyomavirus B-lymphotropic polyomavirus and the human polyomavirus JC polyomavirus. PMID:15731285

  1. Fibroblast growth factors: An epigenetic mechanism of broad spectrum resistance to anticancer drugs

    OpenAIRE

    Song, SaeHeum; Wientjes, M. Guillaume; Gan, Yuebo; Au, Jessie L. -S.

    2000-01-01

    Based on the observation that removal of tumors from metastatic organs reversed their chemoresistance, we hypothesized that chemoresistance is induced by extracellular factors in tumor-bearing organs. By comparing chemosensitivity and proteins in different tumors (primary vs. metastases) and different culture systems (tumor fragment histocultures vs. monolayer cultures derived from the same tumor), we found elevated levels of acidic (aFGF) and basic (bFGF) fibroblast growth factors in the con...

  2. Inhibition of Vaccinia virus entry by a broad spectrum antiviral peptide

    International Nuclear Information System (INIS)

    Concerns about the possible use of Variola virus, the causative agent of smallpox, as a weapon for bioterrorism have led to renewed efforts to identify new antivirals against orthopoxviruses. We identified a peptide, EB, which inhibited infection by Vaccinia virus with an EC50 of 15 μM. A control peptide, EBX, identical in composition to EB but differing in sequence, was inactive (EC50 > 200 μM), indicating sequence specificity. The inhibition was reversed upon removal of the peptide, and EB treatment had no effect on the physical integrity of virus particles as determined by electron microscopy. Viral adsorption was unaffected by the presence of EB, and the addition of EB post-entry had no effect on viral titers or on early gene expression. The addition of EB post-adsorption resulted in the inhibition of β-galactosidase expression from an early viral promoter with an EC50 of 45 μM. A significant reduction in virus entry was detected in the presence of the peptide when the number of viral cores released into the cytoplasm was quantified. Electron microscopy indicated that 88% of the virions remained on the surface of cells in the presence of EB, compared to 37% in the control (p < 0.001). EB also blocked fusion-from-within, suggesting that virus infection is inhibited at the fusion step. Analysis of EB derivatives suggested that peptide length may be important for the activity of EB. The EB peptide is, to our knowledge, the first known small molecule inhibitor of Vaccinia virus entry.

  3. Effect of spectral range in surface inactivation of Listeria innocua using broad-spectrum pulsed light.

    Science.gov (United States)

    Woodling, Sarah E; Moraru, Carmen I

    2007-04-01

    Pulsed light (PL) treatment is an alternative to traditional thermal treatment that has the potential to achieve several log-cycle reductions in the concentration of microorganisms. One issue that is still debated is related to what specifically causes cell death after PL treatments. The main objective of this work was to elucidate which portions of the PL range are responsible for bacterial inactivation. Stainless steel coupons with controlled surface properties were inoculated with a known concentration of Listeria innocua in the stationary growth phase and treated with 1 to 12 pulses of light at a pulse rate of 3 pulses per s and a pulse width of 360 micros. The effects of the full spectrum (lambda = 180 to 1,100 nm) were compared with the effects obtained when only certain regions of UV, visible, and near-infrared light were used. The effectiveness of the treatments was determined in parallel by the standard plate count and most-probable-number techniques. At a fluence of about 6 J/cm(2), the full-spectrum PL treatment resulted in a 4.08-log reduction of L. innocua on a Mill finish surface, the removal of lambda 400 nm). This work provides additional supporting evidence that cell death in PL treatment is due to exposure to UV light. Additionally, it was shown that even a minor modification of the light path or the UV light spectrum in PL treatments can have a significant negative impact on the treatment intensity and effectiveness. PMID:17477260

  4. Graduated diagnostics required. Broad spectrum of differential diagnoses; Stufendiagnostik erforderlich. Breites Spektrum an Differentialdiagnosen

    Energy Technology Data Exchange (ETDEWEB)

    Auer, I.O. [Medizinische Klinik Juliusspital, Schwerpunkt Gastroenterologie/Rheumatologie, Wuerzburg (Germany)

    1997-10-01

    The time lapse between initial symptoms and secured diagnosis of colitis ulcerosa still is 6-8 weeks, in case of M. Crohn even about 30 weeks. A graduated diagnostic approach is required: phase 1 relies on non-invasive methods such as anamnesis, physical examination, examination of stools, blood chemistry and sonography of the abdomen; phase 2 ecompasses endoscopy and radiological techniques, phase 3 computed tomography and MRI for detection of complications. The results of the leucodiagnosis by scintiscanning, for detection of inflammations of and out of the intestine, offer a still inhomogenous picture in terms of sensitivity and specificity. (orig./MG) [Deutsch] Noch immer betraegt die Zeitspanne von den ersten Symptomen bis zur Diagnose bei Colitis ulcerosa 6 bis 8 Wochen, bei M. Crohn sogar etwa 30 Wochen. Eine Stufendiagnostik ist gefordert: Stufe 1 umfasst nicht-invasive Methoden wie Anamnese, koerperliche Untersuchung, Stuhluntersuchung, Blutchemie und Abdomen-Sonographie, Stufe 2 die Endoskopie und radiologische Methoden, Stufe 3 die CT und die MRT zur Erkennung von Komplikationen. Die Ergebnisse der Leukozytenszintigraphie zum Nachweis entzuendlicher Veraenderungen am und ausserhalb des Darms sind hinsichtlich Spezifitaet und Sensitivitaet noch sehr uneinheitlich. (orig./MG)

  5. Engineering of gadofluoroprobes: Broad-spectrum applications from cancer diagnosis to therapy

    Energy Technology Data Exchange (ETDEWEB)

    Dutta, Ranu A., E-mail: ranu.dutta16@gmail.com [Nanotechnology Application Centre, University of Allahabad, Allahabad 211002 (India); NanoeRA medicare Private Limited, Uttar Pradesh (India); Sharma, Prashant K. [Nanotechnology Application Centre, University of Allahabad, Allahabad 211002 (India); Indian School of Mines, Dhanbad (India); Tiwari, Vandana [Department of Pathology, KGMU, Lucknow (India); Tiwari, Vivek; Patel, Anant B. [Centre for Cellular and Molecular Biology, Hyderabad (India); Pandey, Ravindra [Department of Physics, Michigan Technological University, Michigan 49931-1295 (United States); Pandey, Avinash C. [Nanotechnology Application Centre, University of Allahabad, Allahabad 211002 (India); NanoeRA medicare Private Limited, Uttar Pradesh (India); Bundelkhand University, Jhansi (India)

    2014-01-13

    The engineering of the Gadolinium based nanostructures have been demonstrated in this paper. Nanostructures of α-Gd{sub 2}S{sub 3} exhibit a unique transition between ferromagnetic state and paramagnetic state of the system. It was demonstrated that their properties could be tuned for a wide range of applications ranging from hyperthermia to Magnetic Resonance Imaging, owing to their magnetic moments and large relaxivities. Metallic Gd nanoparticles obtained by reduction method were employed for cancer imaging in mice. The Gd nanoparticles were coated with Curcumin and their biomedical implications in the field of simultaneous diagnosis and therapy of cancer and related diseases has been discussed.

  6. Novel Peptides from Skins of Amphibians Showed Broad-Spectrum Antimicrobial Activities.

    Science.gov (United States)

    Wang, Ying; Zhang, Yue; Lee, Wen-Hui; Yang, Xinwang; Zhang, Yun

    2016-03-01

    Peptide agents are often considered as potential biomaterials for developing new drugs that can overcome the rising resistance of pathogenic micro-organisms to classic antibiotic treatments. One key source of peptide agents is amphibian skin, as they provide a great deal of naturally occurring antimicrobial peptide (AMP) templates awaiting further exploitation and utilization. In this study, 12 novel AMPs from the skins of 3 ranid frogs, Rana limnocharis, R. exilispinosa, and Amolops afghanus, were identified using a 5' PCR primer. A total of 11 AMPs exhibited similarities with currently known AMP families, including brevinin-1, brevinin-2, esculentin-1, and nigrocin, besides, one AMP, named as Limnochariin, represented a novel AMP family. All 12 AMPs contain a C-terminus cyclic motif and most of them show obvious antimicrobial activities against 18 standard and clinically isolated strains of bacteria, including 4 Gram-positive bacteria, 11 Gram-negative bacteria, and 3 fungus. These findings provide helpful insight that will be useful in the design of anti-infective peptide agents. PMID:26452973

  7. Broad spectrum anti-microbial compounds producing bacteria from coast of Qingdao bays.

    Science.gov (United States)

    Khan, Muhammad Naseem; Li, Meng; Mirani, Zulfiqar Ali; Wang, Jingxue; Lin, Hong; Buzdar, Muhammad Aslam

    2015-03-01

    Anti-microbial resistance burden and hazard associated with chemical treatment of infections demanded for new anti-microbial natural products. Marine associated microorganisms are the enormous source of bioactive compounds. In this study we have isolated 272 marine bacteria among them 136 (50%) were antagonistic to at least one of the four pathogenic strains Listeria monocytogenes, Vibrio cholerae, E. coli and S. aureus. Only two strains exhibited antibacterial activity against all four test strains, which were identified by 16S rDNA sequencing as Bacillus sp. DK1-SA11 and Vibrio sp. DK6-SH8. Marine isolate DK1-SA11 has potential to resist boiling temperature and pH 2-12. Furthermore cell free extract (CFE) inhibited all test organisms including superbug MRSA and pathogenic yeast Candida albicans. Marine isolate Bacillus sp. DK1-SA11 could be a potential combatant for the battle of drugs and bugs. PMID:25730803

  8. The effect of broad-spectrum antibiotics on warfarin excretion and metabolism in the rat

    International Nuclear Information System (INIS)

    The excretion and metabolism of 14C-warfarin in rats was examined in a crossover experiment, the first phase consisting of treatment with normal saline, the second phase using the same animals given neomycin, bacitracin, and tetracycline orally. Urine and feces were collected every 24 hours for 72 hours and examined for warfarin and its metabolites, both unconjugated and conjugated. Significantly more radioactivity was eliminated in th feces of antibiotic-treated rats. The feces of antibiotic-treated rats contained only trace amounts of beta-glucuronidase activity. Urine contained a similar ratio of unconjugated to conjugated radioactivity in both treatment groups, but the antibiotic-treated animals had significantly larger amount of conjugates in their feces. Examination of metabolic profiles of conjugated and unconjugated fractions revealed significantly fewer hydroxylated metabolites in antibiotic-treated rats, especially in the feces. The lower amount of hydroxylative metabolism in attributed to a reduction in gut flora-medicated interohepatic recycling caused by the antibiotics

  9. Surface structures for enhancement of quantum yield in broad spectrum emission nanocrystals

    Science.gov (United States)

    Schreuder, Michael A.; McBride, James R.; Rosenthal, Sandra J.

    2014-07-22

    Disclosed are inorganic nanoparticles comprising a body comprising cadmium and/or zinc crystallized with selenium, sulfur, and/or tellurium; a multiplicity of phosphonic acid ligands comprising at least about 20% of the total surface ligand coverage; wherein the nanocrystal is capable of absorbing energy from a first electromagnetic region and capable of emitting light in a second electromagnetic region, wherein the maximum absorbance wavelength of the first electromagnetic region is different from the maximum emission wavelength of the second electromagnetic region, thereby providing a Stokes shift of at least about 20 nm, wherein the second electromagnetic region comprises an at least about 100 nm wide band of wavelengths, and wherein the nanoparticle exhibits has a quantum yield of at least about 10%. This abstract is intended as a scanning tool for purposes of searching in the particular art and is not intended to be limiting of the present invention.

  10. A mutagenesis-derived broad-spectrum disease resistance locus in wheat.

    Science.gov (United States)

    Campbell, Jackie; Zhang, Hongtao; Giroux, Michael J; Feiz, Leila; Jin, Yue; Wang, Meinan; Chen, Xianming; Huang, Li

    2012-07-01

    Wheat leaf rust, stem rust, stripe rust, and powdery mildew caused by the fungal pathogens Puccinia triticina, P. graminis f. sp. tritici, P. striiformis f. sp. tritici, and Blumeria graminis f. sp. tritici, respectively, are destructive diseases of wheat worldwide. Breeding durable disease resistance cultivars rely largely on continually introgressing new resistance genes, especially the genes with different defense mechanisms, into adapted varieties. Here, we describe a new resistance gene obtained by mutagenesis. The mutant, MNR220 (mutagenesis-derived new resistance), enhances resistance to three rusts and powdery mildew, with the characteristics of delayed disease development at the seedling stage and completed resistance at the adult plant stage. Genetic analysis demonstrated that the resistance in MNR220 is conferred by a single semidominant gene mapped on the short arm of chromosome 2B. Gene expression profiling of several pathogenesis-related genes indicated that MNR220 has an elevated and rapid pathogen-induced response. In addition to its potential use in breeding for resistance to multiple diseases, high-resolution mapping and cloning of the disease resistance locus in MNR220 may lead to a better understanding of the regulation of defense responses in wheat. PMID:22446929

  11. A mutagenesis-derived broad-spectrum disease resistance locus in wheat

    OpenAIRE

    Campbell, Jackie; Zhang, Hongtao; Giroux, Michael J.; Feiz, Leila; Jin, Yue; Wang, Meinan; Chen, Xianming; Huang, Li

    2012-01-01

    Wheat leaf rust, stem rust, stripe rust, and powdery mildew caused by the fungal pathogens Puccinia triticina, P. graminis f. sp. tritici, P. striiformis f. sp. tritici, and Blumeria graminis f. sp. tritici, respectively, are destructive diseases of wheat worldwide. Breeding durable disease resistance cultivars rely largely on continually introgressing new resistance genes, especially the genes with different defense mechanisms, into adapted varieties. Here, we describe a new resistance gene ...

  12. MICROBIAL TRANSFORMATION OF GALLOTANNINS TO GALLIC ACID, AN INTERMEDIATE PRODUCT OF TRIMETHOPRIM, A BROAD SPECTRUM ANTIBOITIC

    Directory of Open Access Journals (Sweden)

    C. AYYANNA

    2006-01-01

    Full Text Available A method for producing Gallic acid by microbiological hydrolysis of the tannins of tripods powder is described in the present work. Hydrolysis of gallotanins of the substrate to Gallic acid by aspergilus niger MTCC 282 was studied. A simple extraction procedure is used. Fungal mycelia pre-induced with 5 g/l gallotanin was used as inocolums. Optimal values for various physico-chemical parameters including substrate concentration, inocolum levels, pH, temperature, fermentation, inocolum age, agitatioin, gallotanin concentration nultritional source and metal ion were determined. The yield of Gallic acide with respect to gallotannins present in the substrate is estimated. Yield of Gallic acid are about 82% with respect to gallotannin concentration, which suggests that this method ix exploitable industrially for manufacturing Trimethoprim drug.Currnet total requirment of Gallic acid is around 8,000 tones per year all over the world. Conventionally Gallic acid is being produced by acid hydrolysis of tannin rich source. But this technology has serval disadvantages regarding cost, yield and purity of the product. This technology alos causes a lot of environmental pollution being a chemical process. The present technique of conversion of teri tannins to Gallic acid using fungal mycelia viz, aspergillus niger MTCC 282, being purely a bioconversion is free from pollution with more purity of product.

  13. Discovery of sarolaner: A novel, orally administered, broad-spectrum, isoxazoline ectoparasiticide for dogs.

    Science.gov (United States)

    McTier, Tom L; Chubb, Nathan; Curtis, Michael P; Hedges, Laura; Inskeep, Gregory A; Knauer, Christopher S; Menon, Sanjay; Mills, Brian; Pullins, Aleah; Zinser, Erich; Woods, Debra J; Meeus, Patrick

    2016-05-30

    The novel isoxazoline ectoparasiticide, sarolaner, was identified during a lead optimization program for an orally-active compound with efficacy against fleas and ticks on dogs. The aim of the discovery program was to identify a novel isoxazoline specifically for use in companion animals, beginning with de novo synthesis in the Zoetis research laboratories. The sarolaner molecule has unique structural features important for its potency and pharmacokinetic (PK) properties, including spiroazetidine and sulfone moieties. The flea and tick activity resides in the chirally pure S-enantiomer, which was purified to alleviate potential off-target effects from the inactive enantiomer. The mechanism of action was established in electrophysiology assays using CHO-K1 cell lines stably expressing cat flea (Ctenocephalides felis) RDL (resistance-to-dieldrin) genes for assessment of GABA-gated chloride channel (GABACls) pharmacology. As expected, sarolaner inhibited GABA-elicited currents at both susceptible (CfRDL-A285) and resistant (CfRDL-S285) flea GABACls with similar potency. Initial whole organism screening was conducted in vitro using a blood feeding assay against C. felis. Compounds which demonstrated robust activity in the flea feed assay were subsequently tested in an in vitro ingestion assay against the soft tick, Ornithodoros turicata. Efficacious compounds which were confirmed safe in rodents at doses up to 30mg/kg were progressed to safety, PK and efficacy studies in dogs. In vitro sarolaner demonstrated an LC80 of 0.3μg/mL against C. felis and an LC100 of 0.003μg/mL against O. turicata. In a head-to-head comparative in vitro assay with both afoxolaner and fluralaner, sarolaner demonstrated superior flea and tick potency. In exploratory safety studies in dogs, sarolaner demonstrated safety in dogs≥8 weeks of age upon repeated monthly dosing at up to 20mg/kg. Sarolaner was rapidly and well absorbed following oral dosing. Time to maximum plasma concentration occurred within the first day post-dose. Bioavailability for sarolaner was calculated at >85% and the compound was highly protein bound (>99.9%). The half-life for sarolaner was calculated at 11-12 days. Sarolaner plasma concentrations indicated dose proportionality over the range 1.25-5mg/kg, and these same doses provided robust efficacy (>99%) for ≥35days against both fleas (C. felis) and multiple species of ticks (Rhipicephalus sanguineus, Ixodes ricinus and Dermacentor reticulatus) after oral administration to dogs. As a result of these exploratory investigations, sarolaner was progressed for development as an oral monthly dose for treatment and control of fleas and ticks on dogs. PMID:26961590

  14. Association between colistin resistance and broad-spectrum recipient deficiency in Klebsiella pneumoniae.

    OpenAIRE

    Lamousin-White, M; O'Callaghan, R J

    1986-01-01

    A colistin-resistant mutant of Klebsiella pneumoniae served well as a donor but not as a recipient in conjugation. A nearly 1,000-fold difference between colistin-susceptible and colistin-resistant forms of this strain was observed by using donors of plasmids of four incompatibility groups. Recipient efficiency was not restored by filter matings.

  15. Proteus mirabilis ZapA Metalloprotease Degrades a Broad Spectrum of Substrates, Including Antimicrobial Peptides

    OpenAIRE

    Belas, Robert; Manos, Jim; Suvanasuthi, Rooge

    2004-01-01

    The 54-kDa extracellular metalloprotease ZapA is an important virulence factor of uropathogenic Proteus mirabilis. While ZapA has the ability to degrade host immunoglobulins (Igs), the dramatic attenuation of virulence in ZapA mutants suggests that this enzyme may have a broader spectrum of activity. This hypothesis was tested by in vitro assays with purified ZapA and an array of purified protein or peptide substrates. The data reveal that many proteins found in the urinary tract are substrat...

  16. Black cobra (Naja naja karachiensis) lysates exhibit broad-spectrum antimicrobial activities

    OpenAIRE

    Sagheer, Mehwish; Siddiqui, Ruqaiyyah; Iqbal, Junaid; Khan, Naveed Ahmed

    2014-01-01

    It is hypothesized that animals living in polluted environments possess antimicrobials to counter pathogenic microbes. The fact that snakes feed on germ-infested rodents suggests that they encounter pathogenic microbes and likely possess antimicrobials. The venom is used only to paralyze the rodent, but the ability of snakes to counter potential infections in the gut due to disease-ridden rodents requires robust action of the immune system against a broad range of pathogens. To test this hypo...

  17. Black cobra (Naja naja karachiensis) lysates exhibit broad-spectrum antimicrobial activities

    Science.gov (United States)

    Sagheer, Mehwish; Siddiqui, Ruqaiyyah; Iqbal, Junaid; Khan, Naveed Ahmed

    2014-01-01

    It is hypothesized that animals living in polluted environments possess antimicrobials to counter pathogenic microbes. The fact that snakes feed on germ-infested rodents suggests that they encounter pathogenic microbes and likely possess antimicrobials. The venom is used only to paralyze the rodent, but the ability of snakes to counter potential infections in the gut due to disease-ridden rodents requires robust action of the immune system against a broad range of pathogens. To test this hypothesis, crude lysates of different organs of Naja naja karachiensis (black cobra) were tested for antimicrobial properties. The antimicrobial activities of extracts were tested against selected bacterial pathogens (neuropathogenic Escherichia coli K1, methicillin-resistant Staphylococcus aureus (MRSA), Pseudomonas aeruginosa, and Streptococcus pneumonia), protist (Acanthamoeba castellanii), and filamentous fungus (Fusarium solani). The findings revealed that plasma and various organ extracts of N. n. karachiensis exhibited antimicrobial activity against E. coli K1, MRSA, P. aeruginosa, S. pneumoniae, A. castellanii, and F. solani in a concentration-dependent manner. The results of this study are promising for the development of new antimicrobials. PMID:24625321

  18. Passive harmonic hybrid mode-locked fiber laser with extremely broad spectrum.

    Science.gov (United States)

    Li, Xing; Zou, Weiwen; Chen, Jianping

    2015-08-10

    We demonstrate a harmonic mode-locking Erbium-doped fiber laser which is cooperatively mode-locked by nonlinear polarization evolution (NPE) and semiconductor saturable absorber mirror (SESAM). Via effective dispersion and nonlinearity optimization, 8th harmonic at a repetition rate of 666.7 MHz is obtained. The output pulses has a full spectrum width at half maximum (FWHM) of 181 nm and duration of 218 fs. The pulses are compressed to 91 fs by external chirp compensation. The average power of the direct output pulse at an available pump power of 1.5 W is 136 mW, which exhibits a single-pulse energy of 0.2 nJ. The cavity super-mode suppression is up to 60 dB and the signal-to-noise ratio of the 8th harmonic is over 75 dB. PMID:26367990

  19. Childhood psychosocial stressors and adult onset arthritis: Broad spectrum risk factors and allostatic load

    OpenAIRE

    Von Korff, Michael; Alonso, Jordi; Ormel, Johan; Angermeyer, Matthais; Bruffaerts, Ronny; Fleiz, Clara; de Girolamo, Giovanni; Ronald C. Kessler; Kovess-Masfety, Viviane; Posada-Villa, Jose; Scott, Kate M.; Uda, Hidenori

    2009-01-01

    Neural, endocrine, and immune stress mediators are hypothesized to increase risks of diverse chronic diseases, including arthritis. Retrospective data from the World Mental Health Surveys (N = 18,309) were employed to assess whether adult onset of arthritis was associated with childhood adversities and early onset psychological disorder. Cox proportional hazard models assessed the association of number of childhood adversities and the presence of early onset psychological disorder with arthri...

  20. Colostrum of Healthy Mothers Contains Broad Spectrum of Secretory IgA Autoantibodies

    Czech Academy of Sciences Publication Activity Database

    Přibylová, Jaroslava; Krausová, Klára; Kocourková, I.; Rossmann, Pavel; Klimešová, Klára; Kverka, Miloslav; Tlaskalová-Hogenová, Helena

    2012-01-01

    Roč. 32, č. 6 (2012), s. 1372-1380. ISSN 0271-9142 R&D Projects: GA ČR(CZ) GAP304/11/1252 Institutional support: RVO:61388971 Keywords : Autoantibodies * mucosal immunity * immunoglobulins Subject RIV: EC - Immunology Impact factor: 3.382, year: 2012

  1. Broad-spectrum therapeutic suppression of metastatic melanoma through nuclear hormone receptor activation.

    Science.gov (United States)

    Pencheva, Nora; Buss, Colin G; Posada, Jessica; Merghoub, Taha; Tavazoie, Sohail F

    2014-02-27

    Melanoma metastasis is a devastating outcome lacking an effective preventative therapeutic. We provide pharmacologic, molecular, and genetic evidence establishing the liver-X nuclear hormone receptor (LXR) as a therapeutic target in melanoma. Oral administration of multiple LXR agonists suppressed melanoma invasion, angiogenesis, tumor progression, and metastasis. Molecular and genetic experiments revealed these effects to be mediated by LXRβ, which elicits these outcomes through transcriptional induction of tumoral and stromal apolipoprotein-E (ApoE). LXRβ agonism robustly suppressed tumor growth and metastasis across a diverse mutational spectrum of melanoma lines. LXRβ targeting significantly prolonged animal survival, suppressed the progression of established metastases, and inhibited brain metastatic colonization. Importantly, LXRβ activation displayed melanoma-suppressive cooperativity with the frontline regimens dacarbazine, B-Raf inhibition, and the anti-CTLA-4 antibody and robustly inhibited melanomas that had acquired resistance to B-Raf inhibition or dacarbazine. We present a promising therapeutic approach that uniquely acts by transcriptionally activating a metastasis suppressor gene. PMID:24581497

  2. Delivery of a multivalent scrambled antigen vaccine induces broad spectrum immunity and protection against tuberculosis.

    Science.gov (United States)

    West, Nicholas P; Thomson, Scott A; Triccas, James A; Medveczky, C Jill; Ramshaw, Ian A; Britton, Warwick J

    2011-10-13

    The development of effective anti-Tuberculosis (TB) vaccines is an important step towards improved control of TB in high burden countries. Subunit vaccines are advantageous in terms of safety, particularly in the context of high rates of HIV co-infection, but they must contain sufficient Mycobacterium tuberculosis antigens to stimulate immunity in genetically diverse human populations. We have used a novel approach to develop a synthetic scrambled antigen vaccine (TB-SAVINE), comprised of overlapping, recombined peptides from four M. tuberculosis proteins, Ag85B, ESAT-6, PstS3 and Mpt83, each of which is immunogenic and protective against experimental TB. This polyvalent TB-SAVINE construct stimulated CD4 and CD8T cell responses against the individual proteins and M. tuberculosis in C57BL/6 and Balb/c mice, when delivered as DNA, Fowl Pox Virus or Vaccinia Virus vaccines. In addition, the DNA-TBS vaccine induced protective immunity against pulmonary M. tuberculosis infection in C57BL/6 mice. Co-immunization of Balb/c mice with virally expressed TBS and HIV1-SAVINE vaccine stimulated strong T cell responses to both the M. tuberculosis and HIV proteins, indicating no effects of antigenic competition. Further development of this TB-SAVINE vaccine expressing components from multiple M. tuberculosis proteins may prove an effective vaccine candidate against TB, which could potentially form part of a safe, combined preventative strategy together with HIV immunisations. PMID:21846485

  3. Broad-Spectrum Antimicrobial Star Polycarbonates Functionalized with Mannose for Targeting Bacteria Residing inside Immune Cells.

    Science.gov (United States)

    Yang, Chuan; Krishnamurthy, Sangeetha; Liu, Jie; Liu, Shaoqiong; Lu, Xiaohua; Coady, Daniel J; Cheng, Wei; De Libero, Gennaro; Singhal, Amit; Hedrick, James L; Yang, Yi Yan

    2016-06-01

    In this study, a series of star-shaped polycarbonates are synthesized by metal-free organocatalytic ring-opening polymerization of benzyl chloride (BnCl) and mannose-functionalized cyclic carbonate monomers (MTC-BnCl and MTC-ipman) with heptakis-(2,3-di-O-acetyl)-β-cyclodextrin (DA-β-CD) as macroinitiator. The distributions and compositions of pendent benzyl chloride and protected mannose group (ipman) units are facilely modulated by varying the polymerization sequence and feed ratio of the monomers, allowing precise control over the molecular composition, and the resulting polymers have narrow molecular weight distribution. After deprotection of ipman groups and quaternization with various N,N-dimethylalkylamines, these star polymers with optimized compositions of cationic and mannose groups in block and random forms exhibit strong bactericidal activity and low hemolysis. Furthermore, the optimal mannose-functionalized polymer demonstrates mannose receptor-mediated intracellular bactericidal activity against BCG mycobacteria without inducing cytotoxicity on mammalian cells at the effective dose. Taken together, the materials designed in this study have potential use as antimicrobial agents against diseases such as tuberculosis, which is caused by intracellular bacteria. PMID:27028263

  4. Efficacy, safety and palatability of a new broad-spectrum anthelmintic formulation in dogs.

    Science.gov (United States)

    Schmid, K; Rohdich, N; Zschiesche, E; Kok, D J; Allan, M J

    2010-10-23

    The efficacy, safety and palatability of a new flavoured chewable anthelmintic tablet were investigated in dogs. The efficacy, based on worm counts, of a single recommended therapeutic dose (RTD) of 5 mg pyrantel + 20 mg oxantel + 5 mg praziquantel/kg bodyweight was assessed in experimental infections (EI) and natural infections (NI) with Trichuris vulpis, Echinococcus granulosus and Toxocara canis. For T vulpis, the efficacy of the treatment was 99.3 per cent in EI (comparing groups of six treated and six control dogs) and 100 per cent in NI (nine treated and nine control dogs). For E granulosus, the efficacy was more than 99.9 per cent in EI (11 treated and 11 control dogs). For T canis, the efficacy was 94.3 per cent in EI (10 treated and 10 control dogs) and 100 per cent in NI (12 treated and 13 control dogs). In a field study, Ancylostoma caninum (11 dogs) and T canis (11 dogs) faecal egg counts were reduced by more than 99 per cent, and in eight dogs with Dipylidium caninum proglotides in the faeces the efficacy was 100 per cent. The tablets were readily consumed by 56 of 64 (87.5 per cent) privately owned dogs. Safety was assessed in groups of six dogs treated either once with twice the RTD, once with six times the RTD, with twice the RTD on three consecutive days, or untreated. There were no significant differences in blood parameters between the groups, and no abnormal clinical findings. Two dogs treated with six times the RTD vomited, but no vomiting was observed when administration was repeated two days later. PMID:21257464

  5. The broad spectrum of Trichinella hosts: from cold- to warm-blooded animals.

    Science.gov (United States)

    Pozio, E

    2005-09-01

    In recent years, studies on Trichinella have shown that the host range is wider than previously believed and new Trichinella species and genotypes have been described. Three classes of vertebrates are known to act as hosts, mammals, birds and reptiles, and infected vertebrates have been detected on all continents but Antarctica. Mammals represent the most important hosts and all Trichinella species are able to develop in this vertebrate class. Natural infections with Trichinella have been described in more than 150 mammalian species belonging to 12 orders (i.e., Marsupialia, Insectivora, Edentata, Chiroptera, Lagomorpha, Rodentia, Cetacea, Carnivora, Perissodactyla, Artiodactyla, Tylopoda and Primates). The epidemiology of the infection greatly varies by species relative to characteristics, such as diet, life span, distribution, behaviour, and relationships with humans. The non-encapsulated species Trichinella pseudospiralis, detected in both mammals (14 species) and birds (13 species), shows a cosmopolitan distribution with three distinguishable populations in the Palearctic, Nearctic and Australian regions. Two additional non-encapsulated species, Trichinella papuae, detected in wild pigs and saltwater crocodiles of Papua New Guinea, and Trichinella zimbabwensis, detected in farmed Nile crocodiles of Zimbabwe, can complete their life cycle in both mammals and reptiles. To the best of our knowledge, T. papuae and T. zimbabwensis are the only two parasites known to complete their entire life cycle independently of whether the host is warm-blooded or cold-blooded. This suggests that these two Trichinella species are capable of activating different physiological mechanisms, according to the specific vertebrate class hosting them. PMID:15970384

  6. E-Learning: A Broad-Spectrum View toward Benefits and Pitfalls

    Science.gov (United States)

    Ebrahimi, Pouria

    2010-01-01

    In a world on the move, the need for technology in any of its form is desired every minute of every day. For any type of technology to stay in vogue, real-time information is to be delivered to the applicants; otherwise, it is doomed to fall. The process of updating information and delivering it to the applicants needs education--with no doubt.…

  7. Functionalization of electrospun {beta}-cyclodextrin/polyacrylonitrile (PAN) with silver nanoparticles: Broad-spectrum antibacterial property

    Energy Technology Data Exchange (ETDEWEB)

    Wang Shan [Chemical Engineering College, Inner Mongolia University of Technology, Hohhot, 010051 (China); Bai Jie, E-mail: baijie@imut.edu.cn [Chemical Engineering College, Inner Mongolia University of Technology, Hohhot, 010051 (China); Li Chunping; Zhang Jianbin [Chemical Engineering College, Inner Mongolia University of Technology, Hohhot, 010051 (China)

    2012-11-15

    Highlights: Black-Right-Pointing-Pointer Novel PAN nanofibers contained {beta}-cyclodextrin and Ag nanoparticles. Black-Right-Pointing-Pointer The composite nanofibers as antibacterial material. Black-Right-Pointing-Pointer The composite nanofibers showed stronger antibacterial activity. - Abstract: Polyacrylonitrile (PAN) nanofibers containing {beta}-cyclodextrin ({beta}-CD) and Ag nanoparticles have been prepared by electrospinning technology. The silver nanoparticles were obtained from the AgNO{sub 3}/PAN/DMF solution, in which AgNO{sub 3} acted as the precursor, DMF as reducing reagent, and PAN as protective agent. Then, {beta}-CD was added to above solution and the resultant Ag/{beta}-CD-PAN/DMF solution was directly electrospun to prepare Ag/{beta}-CD-PAN nanofibers. The morphology of the nanofibers has been characterized by scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The antimicrobial properties were investigated by Gram-positive Staphylococcus aureus (S. aureus) and Gram-negative Escherichia coli (E. coli) bacteria, and the results indicated that the composite nanofibers showed stronger antibacterial activity.

  8. Functionalization of electrospun β-cyclodextrin/polyacrylonitrile (PAN) with silver nanoparticles: Broad-spectrum antibacterial property

    International Nuclear Information System (INIS)

    Highlights: ► Novel PAN nanofibers contained β-cyclodextrin and Ag nanoparticles. ► The composite nanofibers as antibacterial material. ► The composite nanofibers showed stronger antibacterial activity. - Abstract: Polyacrylonitrile (PAN) nanofibers containing β-cyclodextrin (β-CD) and Ag nanoparticles have been prepared by electrospinning technology. The silver nanoparticles were obtained from the AgNO3/PAN/DMF solution, in which AgNO3 acted as the precursor, DMF as reducing reagent, and PAN as protective agent. Then, β-CD was added to above solution and the resultant Ag/β-CD-PAN/DMF solution was directly electrospun to prepare Ag/β-CD-PAN nanofibers. The morphology of the nanofibers has been characterized by scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The antimicrobial properties were investigated by Gram-positive Staphylococcus aureus (S. aureus) and Gram-negative Escherichia coli (E. coli) bacteria, and the results indicated that the composite nanofibers showed stronger antibacterial activity.

  9. Expansion of a recent class of broad-spectrum antifungal agents: the echinocandins

    Directory of Open Access Journals (Sweden)

    Roberto Manfredi

    2009-09-01

    Full Text Available The echinocandins show comparable efficacy in the treatment of candidemia and invasive candidiasis. Caspofungin and micafungin appear to be similarly efficacious in salvage therapy in aspergillosis; anidulafungin has excellent in vitro activity against Aspergillus species but as yet there are no sufficient clinical data for anidulafungin in this disease state. Each drug has minor advantages and disadvantages compared to the others of the same classe; however, there are large differences in the approved indications for the different drugs. The formulary selection process should consider the direct and indirect costs of the single agents; the characteristics of the patient population at risk for invasive mycosis, such as frequent use of interacting drugs and the burden of monitoring plasma drug levels of drugs; and the implications of using products for indications which have not been still approved (off-label indications.

  10. Novel gramicidin formulations in cationic lipid as broad-spectrum microbicidal agents

    OpenAIRE

    Ragioto DA; Carrasco LD; Carmona-Ribeiro AM

    2014-01-01

    Danielle AMT Ragioto, Letícia DM Carrasco, Ana M Carmona-Ribeiro Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil Abstract: Dioctadecyldimethylammonium bromide (DODAB) is an antimicrobial lipid that can be dispersed as large closed bilayers (LV) or bilayer disks (BF). Gramicidin (Gr) is an antimicrobial peptide assembling as channels in membranes and increasing their permeability towards ca...

  11. Novel gramicidin formulations in cationic lipid as broad-spectrum microbicidal agents

    Directory of Open Access Journals (Sweden)

    Ragioto DA

    2014-06-01

    Full Text Available Danielle AMT Ragioto, Letícia DM Carrasco, Ana M Carmona-Ribeiro Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil Abstract: Dioctadecyldimethylammonium bromide (DODAB is an antimicrobial lipid that can be dispersed as large closed bilayers (LV or bilayer disks (BF. Gramicidin (Gr is an antimicrobial peptide assembling as channels in membranes and increasing their permeability towards cations. In mammalian cells, DODAB and Gr have the drawbacks of Gram-positive resistance and high toxicity, respectively. In this study, DODAB bilayers incorporating Gr showed good antimicrobial activity and low toxicity. Techniques employed were spectroscopy, photon correlation spectroscopy for sizing and evaluation of the surface potential at the shear plane, turbidimetric detection of dissipation of osmotic gradients in LV/Gr, determination of bacterial cell lysis, and counting of colony-forming units. There was quantitative incorporation of Gr and development of functional channels in LV. Gr increased the bilayer charge density in LV but did not affect the BF charge density, with localization of Gr at the BF borders. DODAB/Gr formulations substantially reduce Gr toxicity against eukaryotic cells and advantageously broaden the antimicrobial activity spectrum, effectively killing Escherichia coli and Staphylococcus aureus bacteria with occurrence of cell lysis. Keywords: antimicrobial peptides, cationic bilayers, bilayer fragments, dioctadecyldimethylammonium bromide, gramicidin A, self-assembly

  12. Phenotypic detection of broad-spectrum beta-lactamases in microbiological practice

    OpenAIRE

    Sedlakova, Miroslava Htoutou; Hanulik, Vojtech; Chroma, Magdalena; Hricova, Kristyna; Kolar, Milan; Latal, Tomas; Schaumann, Reiner; Rodloff, Arne C.

    2011-01-01

    Summary Background Enterobacteriaceae producing ESBL and AmpC enzymes can be associated with failure of antibiotic therapy and related morbidity and mortality. Their routine detection in microbiology laboratories is still a problem. The aim of this study was to compare the sensitivity of selected phenotypic methods. Material/Methods A total of 106 strains of the Enterobacteriaceae family were tested, in which molecular biology methods confirmed the presence of genes encoding ESBL or AmpC. In ...

  13. In vitro studies on the antibacterial activities of YM-13115, a new broad-spectrum cephalosporin.

    OpenAIRE

    Toda, M; Arao, N; Nohara, C; Susaki, K; Tachibana, A

    1985-01-01

    The in vitro antibacterial activities of YM-13115, a new parenteral cephalosporin, were compared with those of ceftazidime, cefoperazone, and cefsulodin. The compound was highly active against the common members of the Enterobacteriaceae and 2 to 256 times more active than cefoperazone. YM-13115 was as active as ceftazidime against Citrobacter freundii, Proteus vulgaris, and Morganella morganii and two to four times more active than ceftazidime against Escherichia coli, Klebsiella pneumoniae,...

  14. A Broad-Spectrum Microbicide with Virucidal Activity against Sexually Transmitted Viruses

    OpenAIRE

    Howett, M K; Neely, E. B.; Christensen, N D; Wigdahl, B; Krebs, F. C.; Malamud, D; Patrick, S D; Pickel, M. D.; Welsh, P. A.; Reed, C. A.; Ward, M. G.; Budgeon, L. R.; Kreider, J W

    1999-01-01

    Sodium dodecyl sulfate (SDS), an alkyl sulfate surfactant derived from an organic alcohol, possesses surfactant properties but also denatures and unfolds both monomeric and subunit proteins. In preliminary experiments, we demonstrated that SDS is a potent inactivator of herpes simplex virus type 2 and human immunodeficiency virus type 1 at concentrations comparable to those used for the surfactant nonoxynol-9. We hypothesized that SDS might be capable of denaturing the capsid proteins of none...

  15. Broad Spectrum Activity of a Lectin-Like Bacterial Serine Protease Family on Human Leukocytes

    Science.gov (United States)

    Ayala-Lujan, Jorge Luis; Vijayakumar, Vidhya; Gong, Mei; Smith, Rachel; Santiago, Araceli E.; Ruiz-Perez, Fernando

    2014-01-01

    The serine protease autotransporter from Enterobacteriaceae (SPATE) family, which number more than 25 proteases with apparent diverse functions, have been phylogenetically divided into two distinct classes, designated 1 and 2. We recently demonstrated that Pic and Tsh, two members of the class-2 SPATE family produced by intestinal and extraintestinal pathogenic E. coli, were able to cleave a number of O-glycosylated proteins on neutrophils and lymphocytes resulting in impaired leukocyte functions. Here we show that most members of the class-2 SPATE family have lectin-like properties and exhibit differential protease activity reliant on glycoprotein type and cell lineage. Protease activity was seen in virtually all tested O-glycosylated proteins including CD34, CD55, CD164, TIM1, TIM3, TIM4 and C1-INH. We also show that although SPATE proteins bound and cleaved glycoproteins more efficiently on granulocytes and monocytes, they also targeted glycoproteins on B, T and natural killer lymphocytes. Finally, we found that the characteristic domain-2 of class-2 SPATEs is not required for glycoprotease activity, but single amino acid mutations in Pic domain-1 to those residues naturally occurring in domain-1 of SepA, were sufficient to hamper Pic glycoprotease activity. This study shows that most class-2 SPATEs have redundant activities and suggest that they may function as immunomodulators at several levels of the immune system. PMID:25251283

  16. Leapfrog diagnostics: Demonstration of a broad spectrum pathogen identification platform in a resource-limited setting

    Directory of Open Access Journals (Sweden)

    Leski Tomasz A

    2012-07-01

    Full Text Available Abstract Background Resource-limited tropical countries are home to numerous infectious pathogens of both human and zoonotic origin. A capability for early detection to allow rapid outbreak containment and prevent spread to non-endemic regions is severely impaired by inadequate diagnostic laboratory capacity, the absence of a “cold chain” and the lack of highly trained personnel. Building up detection capacity in these countries by direct replication of the systems existing in developed countries is not a feasible approach and instead requires “leapfrogging” to the deployment of the newest diagnostic systems that do not have the infrastructure requirements of systems used in developed countries. Methods A laboratory for molecular diagnostics of infectious agents was established in Bo, Sierra Leone with a hybrid solar/diesel/battery system to ensure stable power supply and a satellite modem to enable efficient communication. An array of room temperature stabilization and refrigeration technologies for reliable transport and storage of reagents and biological samples were also tested to ensure sustainable laboratory supplies for diagnostic assays. Results The laboratory demonstrated its operational proficiency by conducting an investigation of a suspected avian influenza outbreak at a commercial poultry farm at Bo using broad range resequencing microarrays and real time RT-PCR. The results of the investigation excluded influenza viruses as a possible cause of the outbreak and indicated a link between the outbreak and the presence of Klebsiella pneumoniae. Conclusions This study demonstrated that by application of a carefully selected set of technologies and sufficient personnel training, it is feasible to deploy and effectively use a broad-range infectious pathogen detection technology in a severely resource-limited setting.

  17. Broad spectrum activity of a lectin-like bacterial serine protease family on human leukocytes.

    Directory of Open Access Journals (Sweden)

    Jorge Luis Ayala-Lujan

    Full Text Available The serine protease autotransporter from Enterobacteriaceae (SPATE family, which number more than 25 proteases with apparent diverse functions, have been phylogenetically divided into two distinct classes, designated 1 and 2. We recently demonstrated that Pic and Tsh, two members of the class-2 SPATE family produced by intestinal and extraintestinal pathogenic E. coli, were able to cleave a number of O-glycosylated proteins on neutrophils and lymphocytes resulting in impaired leukocyte functions. Here we show that most members of the class-2 SPATE family have lectin-like properties and exhibit differential protease activity reliant on glycoprotein type and cell lineage. Protease activity was seen in virtually all tested O-glycosylated proteins including CD34, CD55, CD164, TIM1, TIM3, TIM4 and C1-INH. We also show that although SPATE proteins bound and cleaved glycoproteins more efficiently on granulocytes and monocytes, they also targeted glycoproteins on B, T and natural killer lymphocytes. Finally, we found that the characteristic domain-2 of class-2 SPATEs is not required for glycoprotease activity, but single amino acid mutations in Pic domain-1 to those residues naturally occurring in domain-1 of SepA, were sufficient to hamper Pic glycoprotease activity. This study shows that most class-2 SPATEs have redundant activities and suggest that they may function as immunomodulators at several levels of the immune system.

  18. Lactimidomycin is a broad-spectrum inhibitor of dengue and other RNA viruses.

    Science.gov (United States)

    Carocci, Margot; Yang, Priscilla L

    2016-04-01

    Dengue virus, a member of the Flaviviridae family, is a mosquito-borne pathogen and the causative agent of dengue fever. Despite the nearly 400 million new infections estimated annually, no vaccines or specific antiviral therapeutics are currently available. We identified lactimidomycin (LTM), a recently established inhibitor of translation elongation, as a potent inhibitor of dengue virus 2 infection in cell culture. The antiviral activity is observed at concentrations that do not affect cell viability. We show that Kunjin virus and Modoc virus, two other members of the Flavivirus genus, as well as vesicular stomatitis virus and poliovirus 1, are also sensitive to LTM. Our findings suggest that inhibition of translation elongation, an obligate step in the viral replication cycle, may provide a general antiviral strategy against fast-replicating RNA viruses. PMID:26872864

  19. The reproductive safety profile of mood stabilizers, atypical antipsychotics, and broad-spectrum psychotropics.

    Science.gov (United States)

    Ernst, Carrie L; Goldberg, Joseph F

    2002-01-01

    There has been growing concern about the potential iatrogenic effects of several newer psychotropic drugs on reproductive health safety in women. Areas of particular concern in this regard include (1) controversies about a potential association between the use of valproate and development of polycystic ovary syndrome (PCOS), (2) the safety of use of newer psychotropic medications during pregnancy, and (3) safety issues with these medications in women while breastfeeding. This review summarizes current information about each of these areas. In particular, existing data suggest that (1) PCOS very likely represents a complex neuroendocrine disorder with multiple determinants; (2) menstrual irregularities may be a frequently seen phenomenon in women with bipolar illness, at least partially independent of psychotropic drug therapy; (3) potential central nervous system teratogenicity remains substantial during first-trimester exposure to valproate or carbamazepine; (4) with newer agents used for bipolar disorder and schizophrenia, safety data during pregnancy, while not definitive, are most abundant with olanzapine and with lamotrigine; relatively less is known about systematic pregnancy outcomes with other atypical antipsychotics or newer anticonvulsants; and (5) risks for neonatal safety during lactation continue to appear substantial with lithium, are of potential concern with lamotrigine and clozapine, are quite likely minimal with valproate or carbamazepine, and are indeterminate with most other new anticonvulsants or atypical antipsychotics. Recommendations are presented for clinical management in each of these instances. PMID:11913676

  20. Forensic mental health law reform in Japan: from criminal warehousing to broad-spectrum specialist services?

    Science.gov (United States)

    Weisstub, David N; Carney, Terry

    2006-01-01

    Since the 1980s Japan has undergone a number of mental health law reforms culminating in the 2005 forensic law. This added to its enactments on involuntary commitment, long-term aged care and substitute decision making, bringing Japan into focus as an industrialized state now possessed of a full package of civil and forensic provisions. This article seeks to demonstrate that the new forensic law cannot achieve its own stated goals without seeking to put into place financial and administrative supports aimed to integrate the myriad of patient populations that will be inevitably affected by the new forensic system. In order to avoid the widespread syndrome that has already been experienced internationally of warehousing mentally ill offenders in jails, it is critical that the Japanese government develop effective and culturally sensitive techniques for dealing with low risk populations through a diversionary process. Furthermore, although the legislation addresses serious crimes, it is imperative that policies be put into place to avoid directing young offenders, violent patients from the general hospital system, the developmentally handicapped, already convicted persons found in hospital settings and problematic cases in the correctional system, to the new forensic units established by the legislation. It is only though contemplating unintended outcomes of the legislation that the Japanese government will be able to avoid the ongoing stigmatization and prolonged institutionalization of mentally ill populations. Despite apparent cultural differences internationally vetted human rights requirements must be properly protected, not only in the forensic context, but throughout the mental health system at large. The coordination of services and the development of specialty training are necessary conditions for the realization of improved and humane conditions for mentally ill persons in Japan. PMID:16448699

  1. Designing a broad-spectrum integrative approach for cancer prevention and treatment

    OpenAIRE

    Block, Keith I.; Gyllenhaal, Charlotte; Lowe, Leroy; Amedei, Amedeo; Ruhul Amin, A. R. M.; Amin, Amr; Aquilano, Katia; Arbiser, Jack; Arreola, Alexandra; Arzumanyan, Alla; Salman Ashraf, S.; Azmi, Asfar S.; Benencia, Fabian; Bhakta, Dipita; Bilsland, Alan

    2015-01-01

    Targeted therapies and the consequent adoption of "personalized" oncology have achieved notable successes in some cancers; however, significant problems remain with this approach. Many targeted therapies are highly toxic, costs are extremely high, and most patients experience relapse after a few disease-free months. Relapses arise from genetic heterogeneity in tumors, which harbor therapy-resistant immortalized cells that have adopted alternate and compensatory pathways (i.e., pathways that a...

  2. Engineering broad-spectrum digestion of polyuronides from an exolytic polysaccharide lyase

    OpenAIRE

    MacDonald, Logan C.; Weiler, Elizabeth B.; Berger, Bryan W.

    2016-01-01

    Background Macroalgae represents a promising source of fermentable carbohydrates for use in the production of energy efficient biofuel. The primary carbohydrate in brown algae is the uronic acid-containing alginate, whereas green algae contains a significant amount of glucuronan. A necessary step in the conversion of these polyuronides to bioethanol is saccharification, which can be achieved by enzymatic or chemical degradation. Results Polysaccharide lyases are a class of enzymes which cleav...

  3. Identification of transcriptome induced in roots of maize seedlings at the late stage of waterlogging

    Directory of Open Access Journals (Sweden)

    Zou Xiling

    2010-08-01

    Full Text Available Abstract Background Plants respond to low oxygen stress, particularly that caused by waterlogging, by altering transcription and translation. Previous studies have mostly focused on revealing the mechanism of the response at the early stage, and there is limited information about the transcriptional profile of genes in maize roots at the late stage of waterlogging. The genetic basis of waterlogging tolerance is largely unknown. In this study, the transcriptome at the late stage of waterlogging was assayed in root cells of the tolerant inbred line HZ32, using suppression subtractive hybridization (SSH. A forward SSH library using RNA populations from four time points (12 h, 16 h, 20 h and 24 h after waterlogging treatment was constructed to reveal up-regulated genes, and transcriptional and linkage data was integrated to identify candidate genes for waterlogging tolerance. Results Reverse Northern analysis of a set of 768 cDNA clones from the SSH library revealed a large number of genes were up-regulated by waterlogging. A total of 465 ESTs were assembled into 296 unigenes. Bioinformatic analysis revealed that the genes were involved in complex pathways, such as signal transduction, protein degradation, ion transport, carbon and amino acid metabolism, and transcriptional and translational regulation, and might play important roles at the late stage of the response to waterlogging. A significant number of unigenes were of unknown function. Approximately 67% of the unigenes could be aligned on the maize genome and 63 of them were co-located within reported QTLs. Conclusion The late response to waterlogging in maize roots involves a broad spectrum of genes, which are mainly associated with two response processes: defense at the early stage and adaption at the late stage. Signal transduction plays a key role in activating genes related to the tolerance mechanism for survival during prolonged waterlogging. The crosstalk between carbon and amino acid

  4. Fire Blight Control: The Struggle Goes On. A Comparison of Different Fire Blight Control Methods in Switzerland with Respect to Biosafety, Efficacy and Durability

    Directory of Open Access Journals (Sweden)

    Michele Gusberti

    2015-09-01

    Full Text Available Fire blight (FB, caused by Erwinia amylovora, is one of the most important pome fruit pathogens worldwide. To control this devastating disease, various chemical and biological treatments are commonly applied in Switzerland, but they fail to keep the infection at an acceptable level in years of heavy disease pressure. The Swiss authorities therefore currently allow the controlled use of the antibiotic streptomycin against FB in years that are predicted to have heavy infection periods, but only one treatment per season is permitted. Another strategy for controlling Erwinia is to breed resistant/tolerant apple cultivars. One way of accelerating the breeding process is to obtain resistant cultivars by inserting one or several major resistance genes, using genetic engineering. To date, no study summarizing the impact of different FB control measures on the environment and on human health has been performed. This study consequently aims to compare different disease-control measures (biological control, chemical control, control by antibiotics and by resistant/tolerant apple cultivars obtained through conventional or molecular breeding applied against E. amylovora, considering different protection goals (protection of human health, environment, agricultural diversity and economic interest, with special emphasis on biosafety aspects. Information on each FB control measure in relation to the specified protection goal was assessed by literature searches and by interviews with experts. Based on our results it can be concluded that the FB control measures currently applied in Switzerland are safe for consumers, workers and the environment. However, there are several gaps in our knowledge of the human health and environmental impacts analyzed: data are missing (1 on long term studies on the efficacy of most of the analyzed FB control measures; (2 on the safety of operators handling streptomycin; (3 on residue analyses of Equisetum plant extract, the copper

  5. Late Babylonian Astrology

    Science.gov (United States)

    Steele, John M.

    The last five centuries BC saw the development of several new forms of astrology in Babylonia. Key to these new astrological techniques was the invention of the zodiac in about 400 BC. These new forms of astrology include personal horoscopes, astral medicine, and the exploitation of geometrical relationships between the position of heavenly bodies. Several Late Babylonian astrological doctrines were later adopted within Greek astrology.

  6. Late somatic effects

    International Nuclear Information System (INIS)

    Late effects are by definition effects that occur at least one year, and in most cases decades, after the time of exposure. The late effects considered in this chapter are limited to latent cancer incidence and mortality, and benign thyroid disease. A model is provided for estimating risks of late effects resulting from the radiation exposure likely to be received in the event of a nuclear power plant accident. It is assumed that exposure to high-LET radiation would be negligible in such an accident, and thus only risks from low-LET exposure are evaluated. Separate estimates are provided for risks of leukemia, bone cancer, lung cancer, gastrointestinal cancers, thyroid cancer, skin cancer, and the residual group of all other cancers; estimates of leukemia and other cancers due to in utero exposure are also provided. Risks are expressed in absolute terms as the number of cancer deaths (or cases) per million persons exposed to a particular dose. Because the time of death is also important in assessing the impact of an accident, and because the quality of life after the occurrence of cancer will often be reduced, the number of years of life lost and the number of years of life lived after the occurrence of cancer are also estimated

  7. Induction of resistance to bacterial leaf-blight (Xanthomonas oryzae) disease in the high-yielding variety, Vijaya (IR8 x T90)

    International Nuclear Information System (INIS)

    The high-yielding variety, Vijaya (IR8 x T90) susceptible to bacterial leaf-blight (Xanthomonas oryzae, Uyeda and Ishiyama, Dowson) was taken up for induction of resistance to bacterial leaf-blight disease through EMS treatments. The frequency distribution of bacterial leaf blight of Vijaya (untreated) was bimodal while the frequency curves of the EMS-treated population in M2 was polymodal, showing the introduction of new peaks, thus indicating that a wider range of variability had been induced both towards resistance and susceptibility. The seeds of ''resistant'' (R), ''moderately resistant'' (MR) and ''susceptible'' (S) selections were carried forward up to the M6 generation. The frequency curve of bacterial leaf-blight reaction in each generation (M3 - M6) was polymodal or had a normal distribution, thus indicating that the bacterial leaf-blight reaction of the variety, Vijaya, was probably controlled by a polygenic system. Resistant plants had a very low yield potential whereas the yield range of some MR selections was the same as that of the untreated parent, and in some S selections the yield was higher than that of the parent. (author)

  8. BIS(4-FLUOROPHENYLSULFONYLDITHIOCARBIMATOZINCATE(II SALTS: NEW ANTIFUNGALS FOR THE CONTROL OF Botrytis BLIGHT

    Directory of Open Access Journals (Sweden)

    Alexandre A. Oliveira

    2015-07-01

    Full Text Available Botrytis blight or gray mold is a highly destructive disease caused by Botrytis spp., that infects flowers, trees vegetables, fruit, especially grapevines and strawberry. Three new compounds with general formula (A2[Zn(4-FC6H4SO2N=CS22], where A = PPh3CH3 (2a, PPh3C2H5 (2b, PPh3C4H9 (2c, and the previously published compounds where A = PPh4 (2d and NBu4 (2e, were synthesized by the reaction of 4-fluorophenylsulfonyldithiocarbimate potassium dihydrate and zinc(II acetate dihydrate with the appropriate counter cations (A halides. The new compounds were characterized by infrared, 1H and 13C NMR spectroscopies. All these salts inhibited the growth of Botrytis cinerea, with compounds 2c and 2d showing greater antifungal activity than zinc dimethyldithiocarbamate, the active principle of the fungicide Ziram. The bis(dithiocarbimatezincate(II salts are also active against the bacteria Escherichia coli and Staphylococcus aureus.

  9. A method for the rapid detection and identification of halo blight pathogen on common bean

    Directory of Open Access Journals (Sweden)

    Popović Tatjana

    2014-01-01

    Full Text Available A diagnostic method based on nested-PCR, followed by ELISA and conventional bacteriology tests, for the rapid and reliable detection of halo blight pathogen Pseudomonas savastanoi pv. phaseolicola (Psp collected from infected bean leaves and seeds is described. Psp formed white, small and flat colonies on nutrient agar medium, creamy white, flat and circular on Milk-Tween agar medium and light yellow, convex and shiny on modified sucrose peptone agar medium. Eighteen Gram-negative, catalase-positive and oxidase-negative strains were subjected to nested PCR with primers P 5.1/P 3.1 and P 5.2/P 3.2, which directed the amplification of the 450 bp target DNA fragment in all tested strains. According to the results of DAS- and PTA-ELISA with respect to reactivity to specific antibodies, all analyzed strains belonged to Psp bacterium. Pathogenicity was tested on bean pods and cotyledon leaves, on which greasy spots were formed. Psp did not cause hypersensitive reaction on the leaves of tobacco and geranium. Strains produced levan, fluorescent pigment, oxidative metabolism of glucose, did not reduce nitrate, did not produce indole and H2S, did not hydrolyze starch, gelatin and esculin; they produced acid from glucose, mannose, sucrose and glycerol, and did not produce acid from maltose, starch, esculin, dulcite, sorbitol, inositol and erythritol.

  10. REVIEW ON BANDED LEAF AND SHEATH BLIGHT OF RICE CAUSED BY Rhizoctonia solani KUHN

    Directory of Open Access Journals (Sweden)

    P. Srinivas

    2013-12-01

    Full Text Available Rice (Oryza sativa L. is a graminaceous crop. It is one of the important staple foods for Asian countries. Sheath blight disease is an important fungal disease of rice. Currently, this disease is distributed in almost all the rice growing states. The disease is alarming due to its intensive cultivation of modern high yielding varieties with high doses of nitrogenous fertilizers. Crop with a high plant density and close canopy associated favors disease build up from panicle initiation onwards. Poor weed management practices and increase in frequency of irrigation have aggravated, incidence of the disease due to modified micro climatic conditions. The disease was first recorded from Japan (Miyake, 1910. In India, the disease was first reported from Gurudaspur, Punjab (Paracer and Chahal, 1963 and later it was reported from Uttar Pradesh (Kohli, 1966. The management of this disease is possible only after the detailed study of different aspect of this disease and the pathogen. Management of the disease below its economic threshold is important for increasing the production, productivity and quality of the produce. Recognizing the importance of the problem, need for the effective and socio economically feasible management of the pathogen, the present review presented by keeping the above stated factors of the disease into consideration.

  11. Fungicide baseline for mycelial sensitivity of Exserohilum turcicum, causal agent of northern corn leaf blight

    Directory of Open Access Journals (Sweden)

    Roberto Luis De Rossi

    2015-03-01

    Full Text Available Northern corn leaf blight, caused by Exserohilum turcicum (Et, is one of the major corn diseases which can reduce grain yield and quality. The aim of this study was to determine the mycelial sensitivity of ten Et isolates, five from Argentina and five from Brazil, to six fungicides (carbendazim, captan, fludioxinil, metalaxyl, iprodione and thiram used in seed treatment. The inhibitory concentration (IC50 was determined by using seven concentrations of the fungicides supplemented to the agar medium. The mycelial colony diameter was measured with a digital caliper. Experimental design was completely randomized with four replicates. Data on the percent mycelial growth inhibition were analyzed by logarithmic regression and the IC50 was calculated. The fungicide iprodione was the most potent, with IC50 50 mg/L for all isolates. Although iprodione is the most potent fungicide, it is not used for corn seed treatment. The IC50s obtained in this study can be used as baseline for future monitoring studies of Et sensitivity to fungicides.

  12. Biocontrol of Phytophthora Blight and Anthracnose in Pepper by Sequentially Selected Antagonistic Rhizobacteria against Phytophthora capsici.

    Science.gov (United States)

    Sang, Mee Kyung; Shrestha, Anupama; Kim, Du-Yeon; Park, Kyungseok; Pak, Chun Ho; Kim, Ki Deok

    2013-06-01

    We previously developed a sequential screening procedure to select antagonistic bacterial strains against Phytophthora capsici in pepper plants. In this study, we used a modified screening procedure to select effective biocontrol strains against P. capsici; we evaluated the effect of selected strains on Phytophthora blight and anthracnose occurrence and fruit yield in pepper plants under field and plastic house conditions from 2007 to 2009. We selected four potential biocontrol strains (Pseudomonas otitidis YJR27, P. putida YJR92, Tsukamurella tyrosinosolvens YJR102, and Novosphingobium capsulatum YJR107) among 239 bacterial strains. In the 3-year field tests, all the selected strains significantly (P metalaxyl treatment in the 2007 and 2009 tests, but not in the 2008 test. In the 2-year plastic house tests, all the selected strains significantly (P < 0.05) reduced anthracnose incidence in at least one of the test years, but their biocontrol activities were variable. In addition, strains YJR27, YJR92, and YJR102, in certain harvests, increased pepper fruit numbers in field tests and red fruit weights in plastic house tests. Taken together, these results indicate that the screening procedure is rapid and reliable for the selection of potential biocontrol strains against P. capsici in pepper plants. In addition, these selected strains exhibited biocontrol activities against anthracnose, and some of the strains showed plant growth-promotion activities on pepper fruit. PMID:25288942

  13. PHYSICAL, MORPHOLOGICAL PROPERTIES AND RAMAN SPECTROSCOPY OF CHESTNUT BLIGHT DISEASED CASTANEA SATIVA MILL. WOOD

    Directory of Open Access Journals (Sweden)

    Gokhan Gunduz

    2016-03-01

    Full Text Available In this study, some of the physical and anatomical properties of Chestnut Blight Diseased (CBD wood were investigated, and the study also included observations using Raman spectroscopy. The objective of these investigations was to determine the extent of the damage that is done to the wood of the diseased chestnut trees, which must be removed from the forest and used in the manufacture of industrial products. It was indicated that most of the adverse effects of the disease were in the vascular cambium. There was a clear indication of deterioration of the wood in the last growth ring next to vascular cambium. In the diseased secondary xylem region next to vascular cambium; vessel diameter, vessel frequency and vessel element length had a decrease, and vessel and other cells were irregular compared to healthy wood. Spores were detected and identified as Cryphonectria parasitica (Murrill. Annual ring properties (annual growth ring width, latewood percentage, etc. were similar in diseased wood compared to healthy wood. The Raman spectroscopy results showed no significant changes in the structure of the cell wall or its components. After removing the diseased parts, unlimited usage of formerly wood is possible. Heat treatment of the wood is suggested before use in the interest of sanitation and dimensional stability.

  14. Nucleotide diversity analysis of three major bacterial blight resistance genes in rice.

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    Waikhom Bimolata

    Full Text Available Nucleotide sequence polymorphisms among R gene alleles influence the process of co-evolutionary interaction between host and pathogen by shaping the response of host plants towards invading pathogens. Here, we present the DNA sequence polymorphisms and diversities present among natural alleles of three rice bacterial blight resistance genes, Xa21, Xa26 and xa5. The diversity was examined across different wild relatives and cultivars of Oryza species. Functional significance of selected alleles was evaluated through semi-quantitative reverse transcription polymerase chain reaction and real time PCR. The greatest nucleotide diversity and singleton variable sites (SVS were present in Xa26 (π = 0.01958; SVS = 182 followed by xa5 and Xa21 alleles. The highest frequency of single nucleotide polymorphisms were observed in Xa21 alleles and least in xa5. Transition bias was observed in all the genes and 'G' to 'A' transitions were more favored than other form of transitions. Neutrality tests failed to show the presence of selection at these loci, though negative Tajima's D values indicate the presence of a rare form of polymorphisms. At the interspecies level, O. nivara exhibited more diversity than O. sativa. We have also identified two nearly identical resistant alleles of xa5 and two sequentially identical alleles of Xa21. The alleles of xa5 showed basal levels of expression while Xa21 alleles were functionally not expressed.

  15. Leaf blight and defoliation of Eugenia spp. caused by Cylindrocladium candelabrum and C. spathiphylli in Brazil

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    Luiz Sebastião Poltronieri

    2011-06-01

    Full Text Available Leaf blight and defoliation of Eugenia stipitata Mc Vaugh and Eugenia patrisii Vahl, caused respectively by Cylindrocladium candelabrum (Calonectria scoparia and C. spathiphylli (Calonectria spathiphylli are reported in the state of Pará, Brazil. On both host species, the disease is characterized by dark brown lesions of different sizes and shapes. A whitish bright sporulation, resembling Cylindrocladium is observed on the necrotic lesions by using a stereomycroscope or a pocket lense (10-20 X. Under favorable conditions and depending on the level of infection, intense premature tree defoliation may also be found.Although the conidial germination and mycelial growth were higher at 25ºC for both species, C. candelabrum was more sensitive to the variation of temperature (10, 20, 30 and 40 ºC than C. spathiphylli. This is the first report of C. candelabrum and C. spathiphylli on Eugenia stipitata (araçá-boi and on Eugenia patrisii (ubaia-da-amazônia, respectively in Brazil.

  16. Biological Efficacy of Streptomyces sp. Strain BN1 against the Cereal Head Blight Pathogen Fusarium graminearum

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    Boknam Jung

    2013-03-01

    Full Text Available Fusarium head blight (FHB caused by the filamentous fungus Fusarium graminearum is one of the most severe diseases threatening the production of small grains. Infected grains are often contaminated with mycotoxins such as zearalenone and trichothecences. During survey of contamination by FHB in rice grains, we found a bacterial isolate, designated as BN1, antagonistic to F. graminearum. The strain BN1 had branching vegetative hyphae and spores, and its aerial hyphae often had long, straight filaments bearing spores. The 16S rRNA gene of BN1 had 100% sequence identity with those found in several Streptomyces species. Phylogenetic analysis of ITS regions showed that BN1 grouped with S. sampsonii with 77% bootstrap value, suggesting that BN1 was not a known Streptomyces species. In addition, the efficacy of the BN1 strain against F. graminearum strains was tested both in vitro and in vivo. Wheat seedling length was significantly decreased by F. graminearum infection. However, this effect was mitigated when wheat seeds were treated with BN1 spore suspension prior to F. graminearum infection. BN1 also significantly decreased FHB severity when it was sprayed onto wheat heads, whereas BN1 was not effective when wheat heads were point inoculated. These results suggest that spraying of BN1 spores onto wheat heads during the wheat flowering season can be efficient for plant protection. Mechanistic studies on the antagonistic effect of BN1 against F. graminearum remain to be analyzed.

  17. Altered Gene Expression Profiles of Wheat Genotypes against Fusarium Head Blight

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    Ayumi Kosaka

    2015-02-01

    Full Text Available Fusarium graminearum is responsible for Fusarium head blight (FHB, which is a destructive disease of wheat that makes its quality unsuitable for end use. To understand the temporal molecular response against this pathogen, microarray gene expression analysis was carried out at two time points on three wheat genotypes, the spikes of which were infected by Fusarium graminearum. The greatest number of genes was upregulated in Nobeokabouzu-komugi followed by Sumai 3, whereas the minimum expression in Gamenya was at three days after inoculation (dai. In Nobeokabouzu-komugi, high expression of detoxification genes, such as multidrug-resistant protein, multidrug resistance-associated protein, UDP-glycosyltransferase and ABC transporters, in addition to systemic defense-related genes, were identified at the early stage of infection. This early response of the highly-resistant genotype implies a different resistance response from the other resistant genotype, Sumai 3, primarily containing local defense-related genes, such as cell wall defense genes. In Gamenya, the expression of all three functional groups was minimal. The differences in these molecular responses with respect to the time points confirmed the variation in the genotypes. For the first time, we report the nature of gene expression in the FHB-highly resistant cv. Nobeokabouzu-komugi during the disease establishment stage and the possible underlying molecular response.

  18. Metabolite profiles of rice cultivars containing bacterial blight-resistant genes are distinctive from susceptible rice

    Institute of Scientific and Technical Information of China (English)

    Jiao Wu; Haichuan Yu; Haofu Dai; Wenli Mei; Xin Huang; Shuifang Zhu; Ming Peng

    2012-01-01

    The metabolic changes of bacterial blight-resistant line C418/Xa23 generated by molecular marker-assisted selection (n =12),transgenic variety C418-Xa21 generated by using the Agrobacterium-mediated system (n =12),and progenitor cultivar C418 (n =12) were monitored using gas chromatography/mass spectrometry.The validation,discrimination,and establishment of correlative relationships between metabolite signals were performed by cluster analysis,principal component analysis,and partial least squares-discriminant analysis.Significant and unintended changes were observed in 154 components in C418/Xa23 and 48 components in C418-Xa21 compared with C418 (P < 0.05,Fold change > 2.0).The most significant decreases detected (P< 0.001) in both C418/Xa23 and C418-Xa21 were in three amino acids: glycine,tyrosine,and alanine,and four identified metabolites: malic acid,ferulic acid,succinic acid,and glycerol.Linoleic acid was increased specifically in C418/Xa23 which was derived from traditional breeding.This line,possessing a distinctive metabolite profile as a positive control,shows more differences vs.the parental than the transgenic line.Only succinic acid that falls outside the boundaries of natural variability between the two non-transgenic varieties C418 and C418/Xa23 should be further investigated with respect to safety or nutritional impact.

  19. Combining ability for Fusarium head blight resistance in wheat (Triticum aestivum L.

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    Subas Malla

    2010-12-01

    Full Text Available Fusarium head blight (FHB caused by Fusarium graminearum reduces wheat (Triticum aestivum L. em. Thell grain yield and end-use quality worldwide. Three each of FHB susceptible (‘Nekota’, ‘2137’, and ‘Harding’ and resistant (‘Ning 7840’, ‘ND2710’ and ‘BacUp’ parents were included in a partial diallel mating design (Griffing’s Method 4, Model 1. The F4:5 progeny was evaluated for healthy index, undamaged kernels, and deoxynivalenol (DON content following artificial inoculation and mist-irrigation in 2006 and 2007. General combining ability (GCA was highly significant (P < 0.01 for healthy index; whereas specific combining ability (SCA and GCA-by-year interaction were not significant. The combining ability ratio and narrow-sense heritability were 0.95 and 0.83, respectively. The Genotype, Genotype-by-Environment (GGE biplot analysis showed that the ND2710/BacUp combination had the best healthy index and undamaged kernels; whereas Ning 7840 contributed resistance to DON accumulation. The results indicated additive gene effects mainly control that healthy index. Thus, genetic gain in developing resistance in wheat can be achieved through selection.

  20. Cyclic lipopeptide profile of three Bacillus subtilis strains; antagonists of Fusarium head blight.

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    Dunlap, Christopher A; Schisler, David A; Price, Neil P; Vaughn, Steven F

    2011-08-01

    The objective of the study was to identify the lipopetides associated with three Bacillus subtilis strains. The strains are antagonists of Gibberella zeae, and have been shown to be effective in reducing Fusarium head blight in wheat. The lipopeptide profile of three B. subtilis strains (AS43.3, AS43.4, and OH131.1) was determined using mass spectroscopy. Strains AS43.3 and AS43.4 produced the anti-fungal lipopeptides from the iturin and fengycin family during the stationary growth phase. All three strains produced the lipopeptide surfactin at different growth times. Strain OH131.1 only produced surfactin under these conditions. The antifungal activity of the culture supernatant and individual lipopeptides was determined by the inhibition of G. zeae. Cell-free supernatant from strains AS43.3 and AS43.4 demonstrated strong antibiosis of G. zeae, while strain OH131.1 had no antibiosis activity. These results suggest a different mechanism of antagonism for strain OH131.1, relative to AS43.3 and AS43.4. PMID:21887643