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Sample records for broad bean rot

  1. FTIR Spectroscopic Study of Broad Bean 3iseased Leaves

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    [Objective] The aim was to indentify diseased leaves of broad bean by vibra- tional spectroscopy. [Method] In this paper, broad bean rust, fusarium rhizome rot, broad bean zonate spot, yellow leaf curl virus and normal leaves were studied using Fourier transform infrared spectroscopy combined with chemometrics. [Result] The spectra of the samples were similar, only with minor differences in absorption inten- sity of several peaks. Second derivative analyses show that the significant difference of all samples was in the range of 1 200-700 cm2. The data in the range of 1 200- 700 cm' were selected to evaluate correlation coefficients, hierarchical cluster analy- sis (HCA) and principal component analysis (PCA). Results showed that the correla- tion coefficients are larger than 0.928 not only between the healthy leaves, but also between the same diseased leaves. The values between healthy and diseased leaves, and among diseased leaves, are all declined. HCA and PCA yielded about 73.3% and 82.2% accuracy, respectively. [Conclusion] This study demonstrated that FTIR techniques might be used to detect crop diseases.

  2. Trichoderma spp. decrease Fusarium root rot in common bean

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    Hudson Teixeira

    2012-12-01

    Full Text Available The effectiveness of six Trichoderma-based commercial products (TCP in controlling Fusarium root rot (FRR in common bean was assessed under field conditions. Three TCP, used for seed treatment or applied in the furrow, increased seedling emergence as much as the fungicide fludioxonil. FRR incidence was not affected, but all TCP and fludioxonil reduced the disease severity, compared to control. Application of Trichoderma-based products was as effective as that of fludioxonil in FRR management.

  3. Identification of soil-borne pathogens in a common bean root rot nursery in Isabela, Puerto Rico

    Science.gov (United States)

    Limited research has been completed on the root rot complex of the common bean (Phaseolus vulgaris L.) in the Caribbean, while yield losses of over 50% due to root rot disease have been reported worldwide. In this study, the predominant root rot pathogens in a 40-year old common bean root rot nurser...

  4. Occurrence of broad bean (Vicia faba L. diseases in Olsztyn-Elbąg and Bydgoszcz Provinces

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    Stanisław Sadowski

    2013-12-01

    Full Text Available During the years 1981-1985, there were conducted studies of the healthiness of broad bean,'Nadwiślański' variety, cultivated in different soil and climate conditions of the two regions: i.e. Bydgoszcz - comparatively warmer and drier, and Olsztyn-Elbląg - colder and moister. It was found that the main reason for a premature broad bean leaves dry in up in the Olsztyn-Elbląg Region was caused by the fungi Cercospora and Botrytis, and in the Bydgoszcz Region - the root rot which occurs here to a greater extent. Root gangrene was greater intensity in drier and lighter soils. Rotting broad bean roots were most frequently occupied by the fungi of the Fusarium family (ca. 70%. The prevailing species were Fusarium oxysporum, next F. solani and more rarely F. culmorum and F. avenaceum. Climate conditions and soil species affected considerably the species composition of the root fungi.

  5. Effect of gamma irradiation on antinutritional factors in broad bean

    Energy Technology Data Exchange (ETDEWEB)

    Al-Kaisey, M.T. E-mail: istd@uruklink.net; Alwan, A.-K.H.; Mohammad, M.H.; Saeed, A.H

    2003-06-01

    The effect of gamma irradiation on the level of antinutritional factors (trypsin inhibitor (TI), phytic acid and oligosaccharides) of broad bean was investigated. The seeds were subjected to gamma irradiation at 0, 2.5, 5, 7.5 and 10 kGy, respectively using cobalt-60 gamma radiation with a dose rate 2.37 kGy/h. TI activity was reduced by 4.5%, 6.7%, 8.5% and 9.2% at 2.5, 5, 7.5 and 10 kGy, respectively. Meanwhile, irradiation at 10.2, 12.3, 15.4 and 18.2 kGy reduced the phytic acid content. The flatulence causing oligosaccharides were decreased as the radiation dose increased. The chemical composition (protein, oil, ash and total carbohydrates) of the tested seeds was determined. Gamma radiation seems to be a good procedure to improve the quality of broad bean from the nutritional point of view.

  6. [Broad beans (Vicia fava, L.) as an alternative source of protein in chick diets].

    Science.gov (United States)

    Bezares, A; Cuca, M; Avila, E; Velásquez, C

    1980-03-01

    Three experiments were conducted to study the possibility of improving the nutritive value of broad beans (Vicia faba, L.) in poultry diets. In the first experiment, raw and autoclaved (1.0 kg/cm2/15 min) beans, with and without antibiotic supplementation, were studied. The results after 21 days showed no significant differences among treatments in regard to body weight. In feed conversion, however, a significant difference was observed when diets prepared with raw beans were supplemented with 20 ppm of flavomycin. In the second experiment raw and autoclaved beans were supplemented with 0, 10, and 20 ppm of virginiamycin and 200 and 400 ppm of flavomycin to study the effect of these two antibiotics. After 28 days, the results indicated no significant differences with antibiotic supplementation in either raw or autoclaved beans. However, a significant difference (P < 0.05) in body weight was found when beans were autoclaved. In the third experiment, two levels, 31 and 76% of raw and autoclaved beans, were included in the chick diets. The results in body weight, after 28 days, did not show any significant differences between raw and autoclaved beans fed at a 31% level. With the 76% level the autoclaved treatment, however, induced a significantly higher body weight than the diets containing raw beans.

  7. Characterization of non-host resistance in broad bean to the wheat stripe rust pathogen

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    Cheng Yulin

    2012-06-01

    Full Text Available Abstract Background Non-host resistance (NHR confers plant species immunity against the majority of microbial pathogens and represents the most robust and durable form of plant resistance in nature. As one of the main genera of rust fungi with economic and biological importance, Puccinia infects almost all cereals but is unable to cause diseases on legumes. Little is known about the mechanism of this kind of effective defense in legumes to these non-host pathogens. Results In this study, the basis of NHR in broad bean (Vicia faba L. against the wheat stripe rust pathogen, Puccinia striiformis f. sp. tritici (Pst, was characterized. No visible symptoms were observed on broad bean leaves inoculated with Pst. Microscopic observations showed that successful location of stomata and haustoria formation were significantly reduced in Pst infection of broad bean. Attempted infection induced the formation of papillae, cell wall thickening, production of reactive oxygen species, callose deposition and accumulation of phenolic compounds in plant cell walls. The few Pst haustoria that did form in broad bean cells were encased in reactive oxygen and callose materials and those cells elicited cell death. Furthermore, a total of seven defense-related genes were identified and found to be up-regulated during the Pst infection. Conclusions The results indicate that NHR in broad bean against Pst results from a continuum of layered defenses, including basic incompatibility, structural and chemical strengthening of cell wall, posthaustorial hypersensitive response and induction of several defense-related genes, demonstrating the multi-layered feature of NHR. This work also provides useful information for further determination of resistance mechanisms in broad bean to rust fungi, especially the adapted important broad bean rust pathogen, Uromyces viciae-fabae, because of strong similarity and association between NHR of plants to unadapted pathogens and basal

  8. FTIR Study of White and Green Broad Beans Based on Curve-fitting

    Institute of Scientific and Technical Information of China (English)

    Xiaohua; WANG; Gang; LIU; Quanhong; OU; Xingxiang; ZHAO; Jianming; HAO; Xiangping; ZHOU

    2013-01-01

    Fourier transform infrared(FTIR)spectroscopy was used to study two kinds of broad beans with white and green cotyledons respectively.The results show that the infrared spectra of the two kinds of broad beans are similar and mainly made up of the absorption bands of protein,and polysaccharides.The second derivative infrared spectra amplified the differences and revealed that there were some obvious differences in the range of 1 800-700 cm-1and 1 200-700 cm-1.Hierarchical cluster analysis(HCA)were used for the discrimination of the two kinds broad beans based on the second derivative spectral data in the region of 1 611-1 100 cm-1,and yielded 88.9%accuracy.The spectra in the range from 1 700 to 1 600 cm-1were used to perform Fourier self-deconvolution and curve fitting,which obtained nine peaks.The ratios of relative areas of the bands atα-helix,β-sheet,β-turn and the unordered structure of protein in white beans were 67.71%,35.6%,35.6%and 21.09%respectively,while the ratios in green beans were 8.02%,31.59%,37.12%and 23.27%respectively.The results indicate that the secondary structure of protein was different in the two kinds of broad beans.

  9. Management of the broad bean weevil (Bruchus rufimanus Boh.) in faba bean (Vicia faba L.)

    OpenAIRE

    Roubinet, Eve

    2016-01-01

    Summary Bruchus rufimanus Boh. is a common pest on faba beans (Vicia faba L.) all over Europe and worldwide. The area of faba bean production is increasing in Sweden and in Europe, partly encouraged by the CAP subsidies for legume crops and diversified crop rotations. At the same time, number of the insecticides commonly used against B. rufimanus have been removed from the market as pollinators risk to be harmed as the treatment timing corresponds to crop flowering. In Sweden, only one ins...

  10. Glycemic index of split peas, rice (Binam, kidney beans, green peas, "Lavash" bread and broad bean kernels in NIDDM subjects

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    Darabi A

    2000-09-01

    Full Text Available Equal amounts of carbohydrates from various foodstuffs do not increase blood glucose to the same extent. This study was carried out, therefore, in 1996 at the National Nutrition and Food Technology Research institute in Tehran to determine the glycemic index of split pease, rice (Binam, kidney beans, green peas, “Lavash” bread and broad bean kernels. Diabetic subjects were studied in a clinical trial. The exact amount of cabohydrate in foodstuffs was determined using AOAC. Methods. White bread was used as the reference food. After a 12-hour overnight fast on seven separate days each subject was given the test food in an amount to provide 25 g of carbohydrate. Blood glucose was determined after 0, 60, 120 minutes using orthotouidine method. Glycemi response in each individual was calculated as the area under the 2- hour glucose individual was calculated as the area under the test food glucose curve as a percentage of the mean area under the whith bread glucose curve. Glycemic indices of the test foods were 31± 8.5 for split peas, 42.9±3 for rice, 44±9 for kidney beans, 57±7 for green peas, 69±8.5 for “Lavash” bread, and 96±14 for broad bean kernels .Legumes and rice (Binam can be used efficiently in meal planning for the diabetic subjects.

  11. The Response Strategy of Maize, Pea and Broad Bean Plants to Different Osmotic Potential Stress

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    Hamdia M. Abd El-Samad

    2013-08-01

    Full Text Available This investigation was conducted to study the tolerance strategy of maize, broad bean and pea plants to salinity stress with exogenous applications of proline or phenylalanine on seed germination and seedlings growth. From the results obtained, it can be observed that osmotic stress affected adversely the rate of germination in maize, broad bean and pea plants. The excessive inhibition was more prominent at higher concentration of NaCl. The seeds and grains tested were exhibited some differential responses to salinity, in a manner that the inhibitory effect of salinity on seed germination ran in the order, maize higher than broad bean and the later was higher than pea plant. Treatment with proline or phenylalanine (100 ppm significantly increased these seed germination and seedlings growth characteristics even at lowest salinity level tested.

  12. Integrated control of white rot disease on beans caused by Sclerotinia sclerotiorum using Contans® and reduced fungicides application.

    Science.gov (United States)

    Elsheshtawi, Mohamed; Elkhaky, Maged T; Sayed, Shaban R; Bahkali, Ali H; Mohammed, Arif A; Gambhir, Dikshit; Mansour, Aref S; Elgorban, Abdallah M

    2017-02-01

    This study was conducted to determine the compatibility of Contans® (Coniothyrium minitans) with fungicides against Sclerotinia sclerotiorum. Results showed that both Contans® and Topsin® significantly reduced the disease incidence caused by S. sclerotiorum by 90% and 95% survival plants, respectively when they were individually applied and compared to control. While, soil application of Contans® and Sumisclex mixture was the most effective in suppressing the white rot disease incidence that produced 100% survival plants, application of C. minitans combined with the reduced doses of fungicides would be advantageous in saving labor cost, thus increasing production efficiency of bean.

  13. Field application of safe chemical elicitors induced the expression of some resistance genes against grey mold and cottony rot diseases during snap bean pods storage.

    Science.gov (United States)

    El-Garhy, Hoda A S; Rashid, Ismail A S; Abou-Ali, Rania M; Moustafa, Mahmoud M A

    2016-01-15

    Phaseolus vulgaris is subjected to serious post-harvest diseases such as grey mold and cottony rot diseases caused by Botrytis cinerea and Pythium aphanidermatum, respectively. In current study, potassium silicate (KSi), potassium thiosulfate (KTS) and potassium sulfate (KS) suppressed moderately the growth of B. cinerea and P. aphanidermatum in vitro. The applied treatments significantly suppressed grey mold and cottony rot of Xera and Valentino snap beans varieties' pods stored at 7 ± 1°C and 90-95% RH for 20 days. Ethylene responsive factor (ERF), polygalacturonase inhibitor protein (PGIP), phosphatase associated to defense (PA) and pathogenesis-related protein (PR1) defense genes were over-expressed in leaves tissue of both bean varieties responding positively to potassium salts field application. The expression of these genes was influenced by plant genotype and environment as it varied by snap bean varieties. Accumulation of ERF, GIP, PA and PR1 genes transcript under KTS at 4000 ppm treatment were the highest in Xera tissues (3.5-, 4.8-, 4- and 4.8-fold, respectively). In conclusion, pre-harvest potassium salt in vivo application could be used as effective safe alternatives to fungicides against grey mold and cottony rot diseases of snap beans during storage for up to 20 days at 7 ± 1°C.

  14. Motor effects of broad beans (Vicia faba) in Parkinson's disease: single dose studies.

    Science.gov (United States)

    Kempster, P A; Bogetic, Z; Secombei, J W; Martin, H D; Balazs, N D; Wahlqvist, M L

    1993-06-01

    Broad beans (Vicia faba) are a natural source of L-dopa. To investigate a possible role for this substance in the treatment of Parkinsonian motor oscillations, we carried out single dose studies of Vicia faba pod mixture plus carbidopa in six patients. Motor responses of equivalent magnitude to those of conventional L-dopa medication occurred in five cases with mean onset of 39 min and mean duration of 104 min. Vicia faba meals produced comparable L-dopa blood levels to fasting standard tablet doses and recovery studies yielded 0.25% L-dopa per weight of bean pod mixture. Vicia faba contains sufficient L-dopa to be pharmacologically active in patients with Parkinson's disease and can potentially be incorporated into dietary strategies to manage Parkinsonian motor oscillations.

  15. The Effect of Weeds Interference Time and Plant Density on Weeds Control and Broad Bean (Vicia faba L. Yield

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    M Dabaghzadeh

    2016-10-01

    Full Text Available Introduction Broad bean (Vicia faba L. belongs to the Fabaceae family and is the most important protein plant in the world. Although broad bean used as cover crop is able to deal with weeds, but the evidence show that yield of the plant decreased 32-82% because of competition with weeds. Using crop density is one of the ecological approaches in weed management. Broad bean density can produce biomass, weed competition, seed yield and ultimately influence the economic yield. Many reports show that increasing crop density reduced negative effects of weeds. The aim of this experiment was to evaluate the effect of weeds interference and different densities of broad bean on density and biomass of weeds and broad bean seed yield. Materials and Methods The experiment was carried out as split plot in randomized complete block, with four replications, during 2009-2010 in a field experiment at Ramin Agricultural and Natural Resources University, Ahwaz. Weeds interference was investigated on 5 levels, including V5, V9, V13 broad-bean phonological stages, full season weeding and full season weeds interference selected as main plots, and broad-bean density on 3 levels: including 8, 11 and 14 plants m-2 as subplots. Density, dry weight and diversity of weeds and seed yield of broad bean were evaluated. Results and Discussion The results showed that the weeds including wild beet, field bindweed and mallow had the highest occurrence (26.35, 21.17 and 18.46 plants m-2 respectively in V9 broad-bean phonological stage, where the peak abundance of weeds was observed. The frequency of mallow, clover and yellow alfalfa were high until V5 broad-bean phonological stage, but in the next stages, they were replaced by other weeds and sorrel. It was also observed that the environmental factors can affect composition of weeds, for example, as the temperature increased in the early spring, an increase in the density of field bindweed was recorded. In the treatment of 8 plants

  16. The Effect of Humic Acid on Nutrient Composition in Broad Bean (Vicia faba L. Roots

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    Sener AKINCI

    2009-12-01

    Full Text Available Humic acids promote the conversion of mineral nutrients into forms available to plants. It also stimulates seed germination and viability, and its main effect usually being more prominent in the roots. The objective of this study was to determine of the influence of humic acid on broad bean (Vicia faba L. cultivar �Eresen 87� on root growth and development as well as nutrient uptake, during investigation in a pot experiment. Treatment with leonardite, as humic acid source positively affected both germination and harvesting, enhancing root length and biomass. Humic acid (HA caused significant increase of fresh (RFW and dry (RDW weights by 30.1% and 56.6% of broad bean roots, respectively. Flame photometer and atomic absorption spectrophotometry analyses revealed that K content was major nutrient among the tested elements. Humic acid increased the contents of Na and K significantly. The content of Ca and Fe was not significantly increased whereas Cu, Mn and Zn content decreased under HA treatment.

  17. Fate of Clavibacter michiganensis ssp. sepedonicus, the causal organism of bacterial ring rot in potato, in weeds and field crops.

    NARCIS (Netherlands)

    Wolf, van der J.M.; Beckhoven, van J.R.C.M.; Hukkanen, A.; Karjalainen, R.; Muller, P.

    2005-01-01

    Crops and weeds were tested for their ability to host Clavibacter michiganensis ssp. sepedonicus (Cms), the causal agent of bacterial ring rot in potato. Ten crops grown in rotation with potato in Europe, namely maize, wheat, barley, oat, bush bean, broad bean, rape, pea and onion and five cultivars

  18. Apple Latent Spherical Virus Vector as Vaccine for the Prevention and Treatment of Mosaic Diseases in Pea, Broad Bean, and Eustoma Plants by Bean Yellow Mosaic Virus

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    Nozomi Satoh

    2014-11-01

    Full Text Available We investigated the protective effects of a viral vector based on an Apple latent spherical virus (ALSV harboring a segment of the Bean yellow mosaic virus (BYMV genome against mosaic diseases in pea, broad bean, and eustoma plants caused by BYMV infection. In pea plants pre-inoculated with the ALSV vaccine and challenge inoculated with BYMV expressing green fluorescence protein, BYMV multiplication occurred in inoculated leaves, but was markedly inhibited in the upper leaves. No mosaic symptoms due to BYMV infection were observed in the challenged plants pre-inoculated with the ALSV vaccine. Simultaneous inoculation with the ALSV vaccine and BYMV also prevented mosaic symptoms in broad bean and eustoma plants, and BYMV accumulation was strongly inhibited in the upper leaves of plants treated with the ALSV vaccine. Pea and eustoma plants were pre-inoculated with BYMV followed by inoculation with the ALSV vaccine to investigate the curative effects of the ALSV vaccine. In both plant species, recovery from mosaic symptoms was observed in upper leaves and BYMV accumulation was inhibited in leaves developing post-ALSV vaccination. These results show that ALSV vaccination not only prevents mosaic diseases in pea, broad bean, and eustoma, but that it is also effective in curing these diseases.

  19. Apple latent spherical virus vector as vaccine for the prevention and treatment of mosaic diseases in pea, broad bean, and eustoma plants by bean yellow mosaic virus.

    Science.gov (United States)

    Satoh, Nozomi; Kon, Tatsuya; Yamagishi, Noriko; Takahashi, Tsubasa; Natsuaki, Tomohide; Yoshikawa, Nobuyuki

    2014-11-07

    We investigated the protective effects of a viral vector based on an Apple latent spherical virus (ALSV) harboring a segment of the Bean yellow mosaic virus (BYMV) genome against mosaic diseases in pea, broad bean, and eustoma plants caused by BYMV infection. In pea plants pre-inoculated with the ALSV vaccine and challenge inoculated with BYMV expressing green fluorescence protein, BYMV multiplication occurred in inoculated leaves, but was markedly inhibited in the upper leaves. No mosaic symptoms due to BYMV infection were observed in the challenged plants pre-inoculated with the ALSV vaccine. Simultaneous inoculation with the ALSV vaccine and BYMV also prevented mosaic symptoms in broad bean and eustoma plants, and BYMV accumulation was strongly inhibited in the upper leaves of plants treated with the ALSV vaccine. Pea and eustoma plants were pre-inoculated with BYMV followed by inoculation with the ALSV vaccine to investigate the curative effects of the ALSV vaccine. In both plant species, recovery from mosaic symptoms was observed in upper leaves and BYMV accumulation was inhibited in leaves developing post-ALSV vaccination. These results show that ALSV vaccination not only prevents mosaic diseases in pea, broad bean, and eustoma, but that it is also effective in curing these diseases.

  20. THE INFLUENCE OF NON-CHEMICAL METHODS OF PLANT PROTECTION ON THE PRESENCE OF HERBIVOROUS BEETLES IN BROAD BEANS GROWING

    OpenAIRE

    2015-01-01

    The aim of the study was to determine the impact of accompanying plants: sweet alyssum (Lobularia maritima L.) and white mustard (Synapis alba L.), on the incidence of pests of the broad bean (Vicia faba L.) variety Bartek, in the intercropping system. The observations of the number of the beetles of Bruchus rufimanus Boh. and Sitona spp were made. The broad bean was grown along with two other plants in varying spacing (the distances between rows were 50, 65 and 80 cm) and in homogeneous cult...

  1. Improvement of Biocontrol of Damping-off and Root Rot/Wilt of Faba Bean by Salicylic Acid and Hydrogen Peroxide.

    Science.gov (United States)

    Abdel-Monaim, Montaser Fawzy

    2013-03-01

    Rhizoctonia solani, Fusarium solani, F. oxysporum, and Macrophomina phaseolina were found to be associated with root rott and wilt symptoms of faba bean plants collected from different fieldes in New Valley governorate, Egypt. All the obtained isolates were able to attack faba bean plants (cv. Giza 40) causing damping-off and root rot/wilt diseases. R. solani isolates 2 and 5, F. solani isolate 8, F. oxysporum isolate 12 and M. phaseolina isolate 14 were the more virulent ones in the pathogenicity tests. Biocontrol agents (Trichoderma viride and Bacillus megaterium) and chemical inducers (salicylic acid [SA] and hydrogen peroxide) individually or in combination were examined for biological control of damping-off and root rot/wilt and growth promoting of faba bean plants in vitro and in vivo. Both antagonistic biocontrol agents and chemical inducers either individually or in combination inhibited growth of the tested pathogenic fungi. Biocontrol agents combined with chemical inducers recorded the highest inhibited growth especially in case SA + T. viride and SA + B. megaterium. Under green house and field conditions, all treatments significantly reduced damping-off and root rot/wilt severity and increased of survival plants. Also, these treatments increased fresh and weights of the survival plants in pots compared with control. The combination between biocontrol agents and chemical inducers were more effective than used of them individually and SA + T. viride was the best treatment in this respect. Also, under field conditions, all these treatments significantly increased growth parameters (plant height and number of branches per plant) and yield components (number of pods per plant and number of seeds per plant, weight of 100 seeds and total yield per feddan) and protein content in both seasons (2010~2011 and 2011~2012). Faba bean seeds soaked in SA + T. viride and SA + B. megaterium were recorded the highest growth parameters and yield components. Generally, the

  2. THE INFLUENCE OF NON-CHEMICAL METHODS OF PLANT PROTECTION ON THE PRESENCE OF HERBIVOROUS BEETLES IN BROAD BEANS GROWING

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    Barbara Biniaś

    2015-10-01

    Full Text Available The aim of the study was to determine the impact of accompanying plants: sweet alyssum (Lobularia maritima L. and white mustard (Synapis alba L., on the incidence of pests of the broad bean (Vicia faba L. variety Bartek, in the intercropping system. The observations of the number of the beetles of Bruchus rufimanus Boh. and Sitona spp were made. The broad bean was grown along with two other plants in varying spacing (the distances between rows were 50, 65 and 80 cm and in homogeneous cultivation (the distances between rows were 50 cm. Broad bean in a homogeneous cultivation served as a control. In addition, the broad bean from homogeneous cultivation subjected to a standard protection by chemical insecticides was also analyzed. The measurements were carried out in field conditions, by using an entomological bucket, through the shedding of insects from randomly selected 30 plants per plot. The sweet alyssum as an accompanying plant showed no significant influence on the occurrence of herbivorous beetles of Bruchus rufimanus Boh. and Sitona spp., regardless of the spacing between the rows. The white mustard as a companion plant showed a significant impact on increasing the number of Bruchus rufimanus Boh. beetles in the middle row spacing (65 cm. The impact of white mustard on other beetles has not been detected.

  3. Screening and analysis of genes expressed upon infection of broad bean with Clover yellow vein virus causing lethal necrosis

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    Suzuki Yuji

    2011-07-01

    Full Text Available Abstract Clover yellow vein virus (ClYVV causes lethal systemic necrosis in legumes, including broad bean (Vicia faba and pea (Pisum sativum. To identify host genes involved in necrotic symptom expression after ClYVV infection, we screened cDNA fragments in which expression was changed in advance of necrotic symptom expression in broad bean (V. faba cv. Wase using the differential display technique and secondarily with Northern blot analysis. Expression changes were confirmed in 20 genes, and the six that exhibited the most change were analyzed further. These six genes included a gene that encodes a putative nitrate-induced NOI protein (VfNOI, and another was homologous to an Arabidopsis gene that encodes a glycine- and proline-rich protein GPRP (VfGPRP. We recently reported that necrotic symptom development in ClYVV-infected pea is associated with expression of salicylic acid (SA-dependent pathogenesis-related (PR proteins and requires SA-dependent host responses. Interestingly, VfNOI and VfGPRP expression was correlated with that of the putative SA-dependent PR proteins in ClYVV-infected broad bean. However, broad bean infected with a recombinant ClYVV expressing the VfGPRP protein showed weaker symptoms and less viral multiplication than that infected with ClYVV expressing the GFP protein. These results imply that VfGPRP plays a role in defense against ClYVV rather than in necrotic symptom expression.

  4. De novo generation of defective interfering-like RNAs in broad bean mottle bromovirus.

    Science.gov (United States)

    Pogany, J; Romero, J; Huang, Q; Sgro, J Y; Shang, H; Bujarski, J J

    1995-10-01

    Broad been mottle virus (BBMV) is the only member of the bromoviruses that is known to accumulate defective-interfering (DI) RNAs (Romero et al., Virology 194, 576-584, 1993). De novo generation of DI-like RNAs was demonstrated during serial passages of BBMV in broad bean using either DI RNA-free virion RNA preparations or transcribed genomic RNA inocula. As for previously described DI RNAs, all but one of the characterized de novo generated DI-like RNAs were derived by a single in-frame deletion from the RNA2 component. The sole exception was derived by two shorter in-frame deletions from RNA2. The maintenance of an open reading frame by all DI-like RNAs suggests the importance of coding capacity and/or the shortened 2a protein in the accumulation of these RNAs during infection. The deletion junction sites were between nucleotides 1152 and 2366, suggesting that the retained regions are essential for the efficient accumulation of BBMV DI-like RNAs in planta. Short regions of sequence similarity and/or complementarity were revealed at the 5' and 3' junction borders. We speculate that these regions can facilitate DI (DI-like) RNA formation. In addition to DI-like RNAs, the full-length nucleotide sequences of RNA2 components of the Type and Morocco strains of BBMV are presented.

  5. Evaluation for fresh consumption of new broad bean genotypes with a determinate growth habit in central Chile

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    Cecilia Baginsky

    2013-09-01

    Full Text Available Broad bean (Vicia faba L. [unranked] major (Harz Beck is usually consumed dry. In Chile, however, broad bean is grown as a vegetable crop with indeterminate genotypes. The new 'Alarga', 'Retaca' and 'Verde Bonita' broad bean genotypes, which have a determinate growth habit, were evaluated in six irrigated environments in central Chile at three locations (Rancagua, Talca, and Talagante and on two planting dates (F1 and F2; 1-mo apart. The aim was to characterize their yield and select the best-yielding genotypes in terms of pod yield (PY and fresh grain yield (GY. The best location(s to produce fresh pods and fresh grain were also identified and described. Fresh grain yield and components were measured and the genotype x environment interaction (GxE was analyzed. Pod yield differed among genotypes; 'Verde Bonita' and 'Retaca' had the highest PY (15 500 kg ha-1, 8% higher than 'Alarga'. There was a GxE interaction for GY and 'Retaca' had its highest yield in Talca on the two planting dates and in Rancagua when planted late (F2. Mean GY of 'Retaca' was 3900 kg ha-1 with the highest number of grains per 1 m² (NG. The best GY was related to a higher seasonal photothermal quotient (ranging from 1.15 to 1.82 MJ m-2 d-1 °C-1, r = 0.90, P d" 0.001. The lowest GY was in Talagante on F1. Genotypes differed in yield composition; 'Retaca' had many small pods giving many seeds per unit area and 'Verde Bonita' had large pods yielding fewer grains per unit area. The 'Retaca' genotype is preferred by the frozen broad bean industry, whereas 'Verde Bonita' is preferred by the fresh broad bean market.

  6. Genetic Compositions of Broad bean wilt virus 2 Infecting Red Pepper in Korea

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    Hae-Ryun Kwak

    2013-09-01

    Full Text Available The incidence of Broad bean wilt virus 2 (BBWV2 on red pepper was investigated using the samples obtained from 24 areas of 8 provinces in Korea. Two hundred and five samples (79% out of 260 collected samples were found to be infected with BBWV2. While the single infection rate of BBWV2 was 21.5%, the co-infection rate of BBWV2 with Cucumber mosaic virus, Pepper mottle virus, Pepper mild mottle virus and/or Potato virus Y was 78.5%. To characterize the genetic diversity of BBWV2 Korean isolates, 7 isolates were fully sequenced and analyzed. Phylogenetic analyses revealed that BBWV2 isolates could be divided largely into two groups as Group I and Group II. Based on the partial sequence analyses, 153 selected BBWV2 isolates were subgrouped into GS-I (21.6%, GS-II (3.9% and GS-III (56.9%. BBWV2 GS-III, which was predominant in Korea, appears to be a new combination between Group I RNA-1 and Group II RNA-2. Viral disease incidence of BBWV2 on red pepper was under 2% before 2004. However, the incidence was increased abruptly to 41.3% in 2005, 58.2% in 2006 and 79% in 2007. These rapid increases might be related with the emergence of new combinations between BBWV2 groups.

  7. Radiocaesium and radiostrontium uptake by turnips and broad beans via leaf and root absorption

    Energy Technology Data Exchange (ETDEWEB)

    Baeza, A.; Paniagua, J.M.; Rufo, M. [Departamento Fisica, Facultad de Veterinaria, E. Politecnica - Uex, Avda. Universidad s/n, Caceres, (Spain); Sterling, A. [Consejo de Seguridad Nuclear, Madrid (Spain); Barandica, J. [Departamento Ecologia, F. De Biologia, UCM Madrid, Madrid (Spain)

    1999-03-01

    One of the immediate consequences of massive radioisotope release into the atmosphere is contamination of the biosphere. This contamination can affect plants either by direct deposition onto the leaves, or by contaminating the soil followed by absorption by the roots. Knowledge of the efficacy of the two routes of radionuclide incorporation into the food chain is fundamental to understanding the mechanisms by which radioactive contamination reaches man. The present work analyzes the incorporation of {sup 134}Cs and {sup 85}Sr via root and leaf uptake into the parts consumed by man, for two very different crops: turnip (Brassica napus) and broad bean (Vicia faba). The root uptake studies consider the available soil fraction for these two radionuclides, and indicate greater availability for {sup 85}Sr than for {sup 134}Cs which is fixed rapidly in the soil. For the study of leaf uptake, leaves were contaminated at three different stages of plant growth; the results indicate an inverse dependence of the transfer coefficients on the time elapsed from the moment of the contamination to harvesting of the edible parts.

  8. Soil amendment with Aerva javanica (Burm. F. Juss. ex Schult. in the control of root rot fungi of cowpea [Vigna unguiculata (L. Walp.] and mung bean [Vigna radiata (L.

    Directory of Open Access Journals (Sweden)

    Naheed Ikram

    2012-10-01

    Full Text Available Root rot fungi cause severe losses of crop plants, so the present work was carried out to determine the effect of Aerva javanica parts powder on root infecting fungi of mung bean (Vigna radiata (L. and cowpea (Vigna unguiculata (L. Walp.. A. javanica parts (stem, leaves and flower were used as soil amendments at 0.1, 1 and 5% to check the effectiveness on growth parameters. All the plant parts showed a significant reduction in root rot fungi like Fusarium spp., Rhizoctonia solani Kuhn, and Macrophomina phaseolina (Tassi Goid. It was noted that germination percentage, fresh weight, leaf area and number of nodules were significantly higher and the inhibitory effect on root rot fungi increased when the soil was amended with A. javanica leaves at 1%. Thus, among all the treatments, A. javanica leaves at 1% were found to be the most effective against root rot fungi.

  9. Histopathological And Biological Studies On The Role Of Soybean And Broad Bean AgainstRadiation Induce Damage In Rat Kidney

    Directory of Open Access Journals (Sweden)

    Hanaa Fathy Waer, **Abdel El ­ Rahman Mohamed Attia

    2002-09-01

    Full Text Available Most of the physiological and histological activities in the animal body are disturbed after exposure to ionizing radiation. These disturbances are either due to direct harmful effect of radiation on the biological systems or to the indirect effect of free radicals formed in the body after irradiation. There is growing evidence that the type of food plays an important role in the prevention of chronic diseases. The biological disturbance due to ionizing radiation makes search for ways of protecting living organisms essential for controlling the radiation hazards. Much of the world population relies on legumes, as a stable food. Legumes can affectively protect cells and tissues against damage. Our present study was conducted to investigate the hazardous effects of single dose !"#$%#&f the possible protective effect of feeding beans (broad beans and soybeans against radiation exposure. Histopathological, and biological changes of kidney function in irradiated, and bean fed animals were carried out. Animals were weighted and daily food intake was determined. The result obtained revealed that soybean is an extremely rich source of protein and fat as compared to faba bean. Radiations cause a reduction in food intake and weight gain. It causes great changes in the kidney glomeruli and collecting tubules. The recovery of the cells depend on the type of feeding so, feeding soybean gives a significant radiation protection and decreases the extent of changes induced by radiation

  10. Purification of the major UsnRNPs from broad bean nuclear extracts and characterization of their protein constituents.

    OpenAIRE

    1989-01-01

    Small nuclear ribonucleoprotein particles containing the five major nucleoplasmic snRNAs U1, U2, U4, U5 and U6 as well as two smaller sized snRNAs were purified from broad bean nuclear extracts by anti-m3G, monoclonal antibody, immunoaffinity chromatography. We have so far defined 13 polypeptides of approximate mol. wts. of 11 kd, 11.5 kd, 12.5 kd, 16 kd, 17 kd, 17.5 kd, 18.5 kd, 25 kd (double band), 30 kd, 31 kd, 35 kd, 36 kd and 54 kd. Upon fractionation of the UsnRNPs by anion exchange chr...

  11. Integration of sunflower (Helianthus annuus) residues with a pre-plant herbicide enhances weed suppression in broad bean (Vicia faba)

    OpenAIRE

    Alsaadawi,I.S; KHALIQ,A.; A.A Al-Temimi; Matloob,A

    2011-01-01

    Field trial was conducted with the aim of utilizing allelopathic crop residues to reduce the use of synthetic herbicides in broad bean (Vicia faba) fields. Sunflower residue at 600 and 1,400 g m-2 and Treflan (trifluralin) at 50, 75 and 100% of recommended dose were incorporated into the soil alone or in combination with each other. Untreated plots were maintained as a control. Herbicide application in plots amended with sunflower residue had the least total weed count and biomass, which was ...

  12. Nutritional improvement of corn pasta-like product with broad bean (Vicia faba) and quinoa (Chenopodium quinoa).

    Science.gov (United States)

    Giménez, M A; Drago, S R; Bassett, M N; Lobo, M O; Sammán, N C

    2016-05-15

    In this study, the nutritional quality of pasta-like product (spaghetti-type), made with corn (Zea mays) flour enriched with 30% broad bean (Vicia faba) flour and 20% of quinoa (Chenopodium quinoa) flour, was determined. Proximate chemical composition and iron, zinc and dietary fiber were determined. A biological assay was performed to assess the protein value using net protein utilization (NPU), true digestibility (TD) and protein digestibility-corrected amino acid score (PDCAAS). Iron and zinc availability were estimated by measuring dialyzable mineral fraction (%Da) resulting from in vitro gastrointestinal digestion. Nutritionally improved, gluten-free spaghetti (NIS) showed significantly increased NPU and decreased TD compared with a non-enriched control sample. One NIS-portion supplied 10-20% of recommended fiber daily intake. Addition of quinoa flour had a positive effect on the FeDa% as did broad bean flour on ZnDa%. EDTA increased Fe- and ZnDa% in all NIS-products, but it also impaired sensorial quality.

  13. Trichoderma spp. decrease Fusarium root rot in common bean Trichoderma spp. reduzem a podridão-radicular de Fusário em feijoeiro comum

    Directory of Open Access Journals (Sweden)

    Hudson Teixeira

    2012-12-01

    Full Text Available The effectiveness of six Trichoderma-based commercial products (TCP in controlling Fusarium root rot (FRR in common bean was assessed under field conditions. Three TCP, used for seed treatment or applied in the furrow, increased seedling emergence as much as the fungicide fludioxonil. FRR incidence was not affected, but all TCP and fludioxonil reduced the disease severity, compared to control. Application of Trichoderma-based products was as effective as that of fludioxonil in FRR management.A eficácia de seis produtos comerciais à base de Trichoderma (PCT no controle da podridão-radicular-seca do feijoeiro (PRS foi avaliada em condições de campo. Três PCT, usados no tratamento de sementes ou aplicados no sulco de plantio, aumentaram a emergência das plântulas tanto quanto o fungicida fludioxonil. A incidência de PRS não foi afetada, mas todos os PCT e o fludioxonil reduziram a severidade em relação à testemunha. A aplicação de produtos à base de Trichoderma spp. foi tão eficaz quanto o fludioxonil no manejo da PRS.

  14. Cooking Adaptability Evaluation of Twenty Broad Bean Varieties in China%20种中国蚕豆的烹煮加工适用性分析

    Institute of Scientific and Technical Information of China (English)

    谭斌; 谭洪卓; 田晓红; 刘明

    2009-01-01

    Aiming to probe into the cooking adaptability of broad beans,20 broad bean varieties from main growth areas in China were chosen for chemicophysical property measurement and sequential cooking quality evaluation.Five broad bean varieties among them were discovered as variety with the best cooking quality.The correlations between chemicophysical properties and cooking quality of the 20 broad bean varieties were studied.Results: There are significant correlations between ash content and chemieophysical properties and cooking quality of broad beans.It is obvious that the cooking property of broad beans is impacted greatly by the soil and climate conditions of their growth areas.The other correlative parameters with the cooking quality in turn according to r value are starch content in cotyledon,seed coat ratio,fibre content in seed coat,amylose content in cotyledon,and protein content in cotyledon.The physical parameter,100-seeds volume,is considered as an important index for predicting the cooking quality of broad beans.%为探索我国蚕豆烹煮加工的适用性,在前期选取了来自全国各主产区的20种蚕豆作为分析对象,对其化学组分、物理特性进行了测定和分析,在此基础上,继续对其烹煮品质进行评价,结果发现通鲜l号等5个品种的烹煮品质最佳.将蚕豆的理化性质与烹煮品质三者之间进行相关性分析,结果表明,蚕豆的灰分含量与蚕豆的物理性质、烹煮品质相关性最高,说明蚕豆的烹煮加工品质特性受地域土壤环境影响很大.影响烹煮品质的其他指标依次是子叶淀粉、皮重比例、皮粗纤维、子叶直链淀粉、子叶蛋白,而物理指标中的百粒体积可作为预测蚕豆烹煮品质的重要指标.

  15. 灰葡萄孢蚕豆分离物的遗传多样性%Genetic Diversity of Botrytis cinerea Isolates from Broad Bean

    Institute of Scientific and Technical Information of China (English)

    黄燕; 朱振东; 段灿星; 武小菲; 东方阳

    2014-01-01

    Objective]Botrytis cinerea is one of the most important pathogens causing chocolate spot, blossom blight and pod rot in broad bean. B. cinerea is a species complex that comprises two cryptic species, Group I and Group II, and exhibits a great morphological and genetic diversity. However, the status of B. cinerea species complex from broad bean as well as their genetic characteristics have been poorly understood. Therefore, this study aims to determine the status and investigate the genetic diversity and genetic differentiation of isolates of B. cinerea complex from broad bean obtained from six different geographic regions.[Method]The B. cinerea isolates were observed for cultural characteristics on potato dextrose agar. Transposons types of the isolates were detected using Flipper-and Boty-specific primers. Group determination of the isolates was analyzed by PCR-RFLP of Bc-hch gene, and their genetic characteristics was analyzed using SSR markers. [Result] All the 100 isolates were identified as B. cinerea group II. Three colony types, including mycelial type, sclerotial type and conidial type, were produced, and 76 isolates belonged to sclerotial type. Three transposon genotypes were identified in 92 isolates, which contained Boty-only, Fliper-only and Boty+Fliper genotypes. The most prevalent transposon genotype was Boty-only which was detected in isolates from Chongqing, Sichuan, Gansu and Hebei, while genotype Fliper-only was only found in isolates from Jiangsu. SSR analysis detected 92 multilocus genotypes (MLGs) among the 100 isolates with averaged gene and genotypic diversity of 0.5140 and 0.9982, respectively. Analysis of AMOVA revealed that genetic variation within populations accounted for 86.70%of the total genetic variation. The standardized index of association (rD) was estimated to range from 0.0312 to 0.1261 with the average value of 0.0491. In all comparsions, the values of fixation index (FST) ranged from 0.0085-0.2650 with the average value of 0

  16. In vitro fermentation of lupin seeds (Lupinus albus) and broad beans (Vicia faba): dynamic modulation of the intestinal microbiota and metabolomic output

    OpenAIRE

    Gullón, P.; Tavaria, Freni; Vasconcelos, Marta; Gomes, Ana M. P.

    2015-01-01

    Broad beans (Vicia faba) and lupin seeds (Lupinus albus) are legumes rich in a wide range of compounds, which may represent a useful dietary approach for modulating the human gut microbiome. In this work, after in vitro digestion, legume samples were used as carbon sources in anaerobic batch cultures to evaluate their impact on the intestinal microbiota composition and on their metabolic products. The fermentations were monitored by a decrease in pH, generation of short chain fatt...

  17. Stimulation effect of gibberellic acid short-term treatment on leaf photosynthesis related to the increase in Rubisco content in broad bean and soybean.

    Science.gov (United States)

    Yuan, L; Xu, D Q

    2001-01-01

    Short-term (one hour) application (painting on surfaces of leaves) of 9 muM GA(3) increased net photosynthetic rate (Pn) in broad bean leaves at 31 Pa CO(2) and saturating light by more than 20% compared with that of control. The increased Pn was accompanied by an increase in stomatal conductance and a decrease in intercellular CO(2) partial pressure. Moreover, the GA(3)treatment increased the rate of photosynthetic oxygen evolution in isolated broad bean protoplasts to an extent similar to that of leaves. It had little effect on apparent photosynthetic quantum yield and photosynthetic electron transport rate, but could significantly increase carboxylation efficiency in leaves. In consonance with the increase in the carboxylation efficiency, RuBPCase activity and relative content of Rubisco large subunits were also increased by GA(3) treatment. Chloramphenicol, an inhibitor of chloroplast protein synthesis, could eliminate the enhancing effect of GA(3) on photosynthetic oxygen evolution and relative content of Rubisco large subunits in broad bean protoplasts. Nevertheless, actinomycin D and rifampicin, DNA transcription inhibitors, could not eliminate the enhancement effect of GA(3). Similar results were obtained with soybean leaves treated by 90 muM GA(3). These results suggest that the increase in leaf net photosynthetic rate caused by GA(3) short-term treatment is mainly due to the increases in content and activity of RuBPCase, and that GA(3) stimulates the synthesis of Rubisco subunits at translation rather than transcription level.

  18. Nitrogen Fixation (C(2)H(2) Reduction) by Broad Bean (Vicia faba L.) Nodules and Bacteroids under Water-Restricted Conditions.

    Science.gov (United States)

    Guerin, V; Trinchant, J C; Rigaud, J

    1990-03-01

    Water potentials of leaves and nodules of broad bean (Vicia faba L.) cultivated on a sandy mixture were linearly and highly (r(2) = 0.99) correlated throughout a water deprivation of plants. A decrease of 0.2 megapascal of the nodule water potential (Psi(nod)) induced an immediate 25% inhibition of the highest level of acetylene reduction of broad bean nodules attached to roots. This activity continued to be depressed when water stress increased, but the effect was less pronounced. Partial recovery of optimal C(2)H(2) reduction capacity of mildly water stressed nodules (Psi(nod) = -1.2 megapascals) was possible by increasing the external O(2) partial pressure up to 60 kilopascals. The dense packing of the cortical cells of nodules may be responsible for the limitation of O(2) diffusion to the central tissue. Bacteroids isolated from broad bean nodules exhibited higher N(2) fixation activity with glucose than with succinate as an energy-yielding substrate. Bacteroids from stressed nodules appeared more sensitive to O(2), and their optimal activity declined with increasing nodule water deprivation. This effect could be partly due to decreased bacteroid respiration capacity with water stress. Water stress was also responsible for a decrease of the cytosolic protein content of the nodule and more specifically of leghemoglobin. The alteration of the bacteroid environment appears to contribute to the decline in N(2) fixation under water restricted conditions.

  19. Effect of replacing Soya by broad beans on fermentation parameters in the rumen of Sicilo-Sarde rams

    Directory of Open Access Journals (Sweden)

    Moncef Hammami,

    2011-03-01

    Full Text Available The objective of this work was to study the effects of replacing Soybean meal by broad bean (Vicia faba L. in the formulation of concentrates on fermentation parameters in the rumen of Sicilo-Sarde rams. Parameters were pH, N-NH3 concentrations, protozoa, total gas and methane productions and in sacco digestibility of oat hay for different protein sources. Four Sicilo-Sarde rams with permanent canulas were used in this trial. Rams (mean age = 4.75±0.5; mean live weight = 53.3±6.6 kg were kept in individual boxes and received a ration distributed in two meals. The ration included 1.5 kg dry matter of oat hay and 500 g /ram/day of Soybean (S during one month and there after the broad bean (V during another one month period. Each of the trial periods was preceded by a two weeks adaptation period. Water was ad libitum. The S concentrate was 82.5% barley, 13.5% Soya, and 4% mineral mixture, while the F concentrate included 71.5% barley, 17.5% Vicia faba, 7% Soya and 4% mineral mixture. The energy and protein contents were 0.54, 0.96 and 0.96 UFV/kg DM and 5.20, 16.8 and 16.2 % for hay, S and V concentrates, respectively. Samples of 50 ml of rumen juice were taken before the morning meal and after 2, 5 and 8 hours to determine pH and ammonia nitrogen concentration. Types and counts of protozoa were determined on unfiltered rumen juice taken 2 hours after the morning meal and kept in a 100 ml fixing mixture. Protozoa types were counted by means of a HAWSKLEY counter. To determine gas production (CO and CH , rumen content was 2 4 collected in 100 ml plastic syringes before the morning meal and was filtered through four surgical gas layers. Rams were deprived from drinking water during the night before sampling. The DM degradability was determined by in sacco method using nylon bags with 50 micron diameter. Each bag contained 3 g of crushed hay and was incubated in the rumen for 48 hours. The pH of ruminal juice was comparable (P>0.05 for the S and V

  20. Effect of replacing Soya by broad beans on fermentation parameters in the rumen of Sicilo-Sarde rams

    Directory of Open Access Journals (Sweden)

    Moncef Hammami,

    2011-04-01

    Full Text Available The objective of this work was to study the effects of replacing Soybean meal by broad bean (Vicia faba L. in the formulation of concentrates on fermentation parameters in the rumen of Sicilo-Sarde rams. Parameters were pH, N-NH3 concentrations, protozoa, total gas and methane productions and in sacco digestibility of oat hay for different protein sources. Four Sicilo-Sarde rams with permanent canulas were used in this trial. Rams (mean age = 4.75±0.5; mean live weight = 53.3±6.6 kg were kept in individual boxes and received a ration distributed in two meals. The ration included 1.5 kg dry matter of oat hay and 500 g /ram/day of Soybean (S during one month and there after the broad bean (V during another one month period. Each of the trial periods was preceded by a two weeks adaptation period. Water was ad libitum. The S concentrate was 82.5% barley, 13.5% Soya, and 4% mineral mixture, while the F concentrate included 71.5% barley, 17.5% Vicia faba, 7% Soya and 4% mineral mixture. The energy and protein contents were 0.54, 0.96 and 0.96 UFV/kg DM and 5.20, 16.8 and 16.2 % for hay, S and V concentrates, respectively. Samples of 50 ml of rumen juice were taken before the morning meal and after 2, 5 and 8 hours to determine pH and ammonia nitrogen concentration. Types and counts of protozoa were determined on unfiltered rumen juice taken 2 hours after the morning meal and kept in a 100 ml fixing mixture. Protozoa types were counted by means of a HAWSKLEY counter. To determine gas production (CO and CH , rumen content was 2 4 collected in 100 ml plastic syringes before the morning meal and was filtered through four surgical gas layers. Rams were deprived from drinking water during the night before sampling. The DM degradability was determined by in sacco method using nylon bags with 50 micron diameter. Each bag contained 3 g of crushed hay and was incubated in the rumen for 48 hours. The pH of ruminal juice was comparable (P>0.05 for the S and V

  1. Eff ect of microwave fi eld on trypsin inhibitors activity and protein quality of broad bean seeds (Vicia faba var. major

    Directory of Open Access Journals (Sweden)

    Mirosław Pysz

    2012-06-01

    Full Text Available Background. In human nutrition legume seeds are usually subjected to soaking and thermal processes, mainly by using traditional cooking method. This method which has been used for decades, does not allow to control and adjust the parameters of this process. Therefore it does not seem to be the optimal method. Undoubtedly, microwave fi eld is an alternative thermal process to conventional technique. The aim of this study was to assess the impact of microwave fi eld on the activity of trypsin inhibitors and protein quality of three varieties of broad bean seeds. Material and methods. The study was performed on dry seeds of broad bean varieties Windsor White, Bachus and Basta. The seeds were soaked and heated in a microwave. The seeds absorbed different energy doses from 500 J/g, through 750, 1000, 1250, 1500, 1750 to 2000 J/g. The study material prepared in this way was tested for trypsin inhibitor activity, protein solubility and in vitro protein digestibility. The results were analysed by the one-way analysis of variance. Results. Microwave heating resulted in decreased activity of trypsin inhibitors and protein solubility and increased digestibility of protein in all tested varieties of broad bean seeds. With increasing doses of the microwave fi eld energy a decrease in protein solubility was observed. Satisfactory reduction in trypsin inhibitors at the level of 70-75% and highest protein digestibility were obtained by using a microwave fi eld with energy dose of 1000 J/g of seeds. Conclusion. It can be concluded that the optimal dose of microwave energy fi eld which will produce a relatively low activity of trypsin inhibitors and the highest protein digestibility together with maintaining solubility of broad been seeds was 1000 J/g seed.

  2. INFLUÊNCIA DO PREPARO DE SOLO E DA ROTAÇÃO DE CULTURAS NA SEVERIDADE DE PODRIDÕES RADICULARES NO FEIJOEIRO COMUM EFFECTS OF SOIL TILLAGE SYSTEM AND CROP ROTATION ON DRY BEAN ROOT ROT SEVERITY

    Directory of Open Access Journals (Sweden)

    Pedro Marques da Silveira

    2007-09-01

    Full Text Available

    As podridões radiculares do feijoeiro são causadas pelos fungos Rhizoctonia solani Kühn e Fusarium solani f. sp. phaseoli Snyd. & Hans. Neste trabalho testou-se a combinação dos fatores preparo de solo e rotação de culturas, além de se avaliarem seus efeitos sobre as podridões radiculares do feijoeiro. Os tipos de preparo de solo consistiram em: arado+grade (P1, arado (P2, grade (P3 e plantio direto (P4. As rotações de culturas foram: arroz-feijão (R1, milho-feijão (R2, arroz/calopogônio (Calopogonium muconoides-feijão (R3 e milho-feijão-milho-feijão-arroz-feijão (R4. A severidade de F. solani f. sp. phaseoli, avaliada aos 25 dias após o plantio, apresentou interação significativa, sendo a maior severidade encontrada na combinação da rotação R3 com o preparo de solo P1, e a menor severidade, na combinação da rotação R2 com o preparo de solo P3. Diferenças estatísticas ocorreram na severidade da doença provocada por R. solani. O preparo de solo P3 apresentou maior severidade que P4, e, entre as rotações, R3 apresentou a maior severidade da doença.

    PALAVRAS-CHAVE: Rhizoctonia solani; Fusarium solani f. sp. phaseoli; práticas culturais; fungos.

    Dry bean root rot is caused by the fungi Rhizoctonia solani Kühn and Fusarium solani f. sp. phaseoli Snyd. & Hans.The effects of the interaction between soil tillage systems andcrop rotation on the severity of root rot was tested. The soiltillage systems consisted of plough+harrow (P1, plough (P2,harrow (P3 and no tillage (P4 and the crop rotation treatmentswere rice-bean (R1, corn-bean (R2, rice/Calopogonium muconoides-bean (R3 and corn-bean-corn-bean-rice-bean

  3. 蚕豆赤斑病病原菌鉴定%Identification of the pathogens causing chocolate spot on the broad bean

    Institute of Scientific and Technical Information of China (English)

    黄燕; 段灿星; 陆鸣; 东方阳; 朱振东

    2012-01-01

    Abstract Chocolate spot is one of the most important diseases on broad bean, causing severe yield loss in China. In this study, the pathogens for chocolate spot of broad bean were isolated from Gansu, Qinghai, Jiangsu, Sichuan, Hebei and Chongqing provinces and were identified on the basis of the morphological and molecular characteristics. Three Botrytis species, namely B. fabae, B. cinerea and B. fabiopsis, were found in all of the surveyed provinces. The isolates of each species differed greatly in pathogenicity. However, most isolates of each species showed strong pathogenicity on broad bean. To our knowledge, this is the first report of B. fabiopsis in other provinces of our country since the nomenclature of this species in Hubei Province.%蚕豆赤斑病是蚕豆的重要病害之一,严重影响蚕豆生产.本研究通过形态学和分子特征,对采自甘肃、青海、江苏、四川、河北、重庆等6个省市的蚕豆赤斑病病原菌进行鉴定.结果表明,在6个省市均鉴定到蚕豆葡萄孢(Botrytis abae)、灰葡萄孢(B.cinerea)和拟蚕豆葡萄孢(B.fabiopsis)3种病原菌.致病力测定表明:不同地理来源的3种病原菌分离物都存在致病力差异,但均以强致病力分离物为主.本研究是继湖北省之后在其他省市首次发现拟蚕豆葡萄孢.

  4. A study of arsenic speciation in soil, irrigation water and plant tissue: A case study of the broad bean plant, Vicia faba.

    Science.gov (United States)

    Sadee, Bashdar A; Foulkes, Mike E; Hill, Steve J

    2016-11-01

    Samples of soil, the broad bean plant, Vicia faba and irrigation water were collected from the same agricultural site in Dokan, in the Kurdistan region of Iraq. Total arsenic and arsenic speciation were determined in all materials by ICP-MS and HPLC-ICP-MS, respectively. Available arsenic (11%) was also determined within the soil, together with Cd, Cr, Cu, Ni, Zn, Fe and Mn. The concentrations of total arsenic were: soil (5.32μgg(-1)), irrigation water (1.06μgL(-1)), roots (2.065μgg(-1)) and bean (0.133μgg(-1)). Stems, leaves and pods were also measured. Inorganic As(V) dominated soil (90%) and root (78%) samples. However, organo-arsenic (MMA, 48% and DMA, 19%) was the more dominant species in the edible bean. The study provides an insight into the uptake, preferred disposal route, speciation changes and loss mechanism involved for arsenic with this food source.

  5. Quality Analysis of Broad Bean(Vicia faba Linn.) Varieties%不同蚕豆品种的品质分析

    Institute of Scientific and Technical Information of China (English)

    严清彪; 刘玉皎

    2012-01-01

    [目的]研究不同蚕豆(Vicia faba Linn.)品种的品质差异.[方法]对111个不同蚕豆品种的种子蛋白质、单宁、钙以及硒含量进行了测定.[结果]蛋白质含量优异的品种有13个,单宁含量优异的品种有20个,钙含量优异的品种有16个,硒含量优异的品种有18个,通过对蛋白质、单宁、钙以及硒含量进行排序比对,筛选3个单项优质的品种分别为法7(1638)、青海83-26-12,2005-00,3个多项优质品种分别为H8096-3、青海马牙-1-1和伊拉克45-1.[结论]该研究可为进一步研究和加工利用蚕豆提供参考依据.%The purpose was to study the differences of quality of different broad bean varieties. [ Method ] The content of seed protein, tannins, calcium, and selenium of 111 kinds of broad bean varieties were measured. [ Result] The results showed that among the 111 different broad beans varieties, 13 varieties were high in protein content, 20 varieties were high in tannins content, 16 varieties were high in calcium content, and 18 varieties were high in selenium content. Though the sort and comparison of the content of protein, tannins, calcium, and selenium, 3 varieties were found to be single high-quality varieties; Fa7(1638) , Qinhai83-26-12, and2005-00, 3varieties were found to be multiply-quality varieties; H8096-3 , Qinhaiyama-1-1, and Iraq45-1. [ Conclusion] The study provides a reference basis for deeply researching, machining and utilizing of broad bean.

  6. Phylogeny and diversity of broad bean rhizobium in Qinghai%青海蚕豆根瘤菌的系统发育与多样性研究

    Institute of Scientific and Technical Information of China (English)

    韩梅; 马晓彤; 曹卫东; 张宏亮; 王雪翠

    2015-01-01

    To explore and exploit broad bean rhizobium of Qinghai, and determine their classification status.Broad bean rhizobia were collected in Qinghai and 16 SrDNA identification, phylogeny and diversity were studied.The results showed that 6 strains belonging to 4 groups respectively, andR. leguminosarum, R.laguerreae, R.fabae, R.pisi have the closest phylogenetic relationship.The species diversity is rich in Qinghai.%为发掘和利用青海冷凉地区蚕豆优良的根瘤菌种质资源,确定其分类地位.通过对青海冷凉地区采集的蚕豆根瘤菌进行16 SrDNA鉴定、系统发育及多样性研究.结果表明:6株供试菌株属于4个类聚,分别与Rhizobium leguminosarum,R.laguerreae,R.fabae,R.pisi亲缘关系最为接近,种类多样性较为丰富.

  7. Correlation and path coefficient analysis of yield and yield component in some of broad bean (Vicia faba l. genotypes

    Directory of Open Access Journals (Sweden)

    Sharifi Peyman

    2014-01-01

    Full Text Available Faba bean is a grain legume and grown for its high protein content in the seed. It is also serves as a rotational crop which play great role in controlling disease epidemics in areas were cereal mono-cropping is abundant. Yield in faba bean, similar to the other crops, is a complex trait and constitute by many of morphological and physiological traits. This study was carried out during 2011-12 and 2012-13 in two region of Iran including Guilan and Lorestan provinces. Field experiments were conducted in a randomized complete block design with three replications and ten genotypes. The results of combined analysis of variance indicated that the studied genotypes differed significantly for all of the studied traits. The results indicated also environment effect and environment × genotype interaction effects were significant or highly significant for all of the traits. The highest seed yield were determined for genotype 1 (3159.9 and 4016.9 kg ha-1 at 2012 and 2013, respectively in Guilan and genotype 5 (495.44 kg ha-1 in Lorestan. The results of correlation analysis indicated that there were positive significant correlation coefficients between seed yield and seed length (LS, seed width (WS, pod length (PL and hundred seed weight (HSW in Guilan province at two cropping season. Path coefficient analysis indicated that traits containing number of pod per plant, number of steam per plant, pod length, seed length/width ratio and hundred seed weight had the highest positive direct effects on dry seed yield in studied faba bean genotypes. Attention should be paid to some of characters such as pod length, hundred seed weight, number of pods per plant and number of stems per plant for augmentation of seed yield and these traits could be used as selection criteria in faba bean breeding programs. These findings indicate that selection for each or full of the above traits would be accompanied by high yielding ability under such conditions. It could be

  8. 毛霉型蚕豆豆豉粑工艺研究%Research on the process of broad-bean cake fermented by mucor

    Institute of Scientific and Technical Information of China (English)

    罗晓妙

    2014-01-01

    该实验以蚕豆为主要原料、毛霉为主要发酵菌种制作豆豉粑,研究生产工艺中的制曲工艺、后发酵工艺、干制工艺等关键技术点,以确定较优的工艺参数。研究结果表明:以1∶1的冷水(室温)将蚕豆浸泡4~5 h,使蚕豆去皮熟化后的水分含量约为40%左右,按原料质量的2%接种毛霉菌液(孢子浓度约为1×105个/mL),混匀后置于25℃培养5 d制曲,制曲过程中每天翻曲,然后用2%的米酒汁润湿成曲,再加入12%的食盐,混匀,捣碎,密闭后置于30℃恒温后熟至少30 d,然后再取出制成薄饼状,置于50℃烘箱中干制8 h左右使水分含量降至30%左右可制得质量上乘的蚕豆豆豉粑。%The formented broad-bean cake was produced with broad-bean as the main material and Mucor as the main fermenting stain. And the Koji-making process,post-fermentation process and drying process were studied in experiment to determine the optimum technologic parameters of Douchiba. The results showed that soaking broad bean in 1∶1 cold water(room temperature)for 4~5 h resulted in moisture content of cooked peeling broad bean being about 40%,then inoculating it with 2%(V/W)of Mucor spore liquid(spore concentration of about 1×105/mL),blending and making koji at 25℃for 5 days. And then koji was sprayed with 2%of rice wine juice to wet the surface,added 12%of salt,blanded,masked to piece and closed at 30℃to after-fermented for at least 30 days. Then taking out to make pancakes and put in 50℃oven for 8 h to cut the moisture content down to around 30%,so the broad bean cake of good quality can be obtained.

  9. Reaction of Phytophthora fruit rot resistant germplasm lines to a broad range of Phytophthora capsici isolates from across the United States of America

    Science.gov (United States)

    Phytophthora fruit rot limits watermelon production in most states in the Southeastern US (FL, GA, SC, NC and VA). It has also become a serious problem in recent years in northern states (IN, MD, DE). About 50% of the US watermelons are grown in the southeastern states where environmental conditions...

  10. 酶解蚕豆蛋白制备多肽酒及其抗氧化性研究%Study on Hydrolyzing and Preparation of Polypeptide Wine from Broad Bean Protein and Its Antioxidant Activity

    Institute of Scientific and Technical Information of China (English)

    杨希娟; 党斌; 刘玉皎; 耿贵工

    2012-01-01

    In order to obtain the broad bean peptides wine, broad bean protein was hydrolyzed by alkaline protease and alcoholic fermentation in this experiment. Antioxidant of the broad bean peptides wine was investigated. The result showed that the optimum conditions for the protein hydrolysates of broad bean; substrate concentration 32 g/L, enzymatic hydrolysis temperature 43. 2℃ ,enzyme activity 9 821. 12 U/g,pH value 9. 50,and the degree of hydrolysis was 19. 64% under the condition of enzymolysis time of 2 h. The fermentation of broad bean peptides wine were as follows;20% sugar,0. 22% yeast quantity,28 ℃ for 6 days. The alcohol content of broad bean peptides wine was 9.6% and it showed transparent brown -yellow color,balance of flavor and taste. The broad bean peptides wine has stronger antioxidant activity under the condition.%以蚕豆蛋白为原料,采用碱性蛋白酶酶解、酒精发酵制备蚕豆多肽酒,并对其抗氧化性进行了研究.结果表明:蚕豆蛋白酶解优化工艺为底物浓度32 g/L,水解温度43.2℃,酶用量9 821.12 U/g,pH 9.50,在此条件下酶解2h,蚕豆蛋白的水解度达到19.64%.以蚕豆酶解液为原料制备多肽酒的发酵工艺为加糖量20%,酵母接种量0.22%,发酵温度28℃,发酵时间6d,在此条件下制得的蚕豆多肽酒的酒精含量为9.6%,呈透明的棕黄色,口感醇正、鲜爽、具有发酵酒的醇香.本试验条件下制备的蚕豆多肽酒具有较强的抗氧化性.

  11. A Lytic Polysaccharide Monooxygenase with Broad Xyloglucan Specificity from the Brown-Rot Fungus Gloeophyllum trabeum and Its Action on Cellulose-Xyloglucan Complexes

    OpenAIRE

    KOJIMA, Yuka; Várnai, Anikó; Ishida, Takuya; Sunagawa, Naoki; Petrovic, Dejan M.; Igarashi, Kiyohiko; Jellison, Jody; GOODELL, BARRY; Alfredsen, Gry; Westereng, Bjørge; Vincent G H Eijsink; Yoshida, Makoto

    2016-01-01

    ABSTRACT Fungi secrete a set of glycoside hydrolases and lytic polysaccharide monooxygenases (LPMOs) to degrade plant polysaccharides. Brown-rot fungi, such as Gloeophyllum trabeum, tend to have few LPMOs, and information on these enzymes is scarce. The genome of G. trabeum encodes four auxiliary activity 9 (AA9) LPMOs (GtLPMO9s), whose coding sequences were amplified from cDNA. Due to alternative splicing, two variants of GtLPMO9A seem to be produced, a single-domain variant, GtLPMO9A-1, and...

  12. Source-sink manipulations suggest an N-feedback mechanism for the drop in N2 fixation during pod-filling in pea and broad bean.

    Science.gov (United States)

    Schulze, Joachim

    2003-05-01

    Various legume species show a marked decline in N2 fixation during pod-filling. The objective of this study was to clarify whether this is a result of impaired nodule assimilate supply or whether re-moblised N from senescing lower leaves initiates the phenomenon through an N-feedback impact. In model experiments on pea and broad bean plants during vegetative and reproductive growth, 30 or 60% of green leaves were either excised or individually darkened, thus removing the same photosynthetic capacity yet allowing N to be re-mobilised from darkened leaves. Results are consistent with an N-feedback down-regulation of nitrogenase in that 1. leaf darkening reduced N2 fixation to a greater extent then excision, 2. darkened leaves quickly senesced and N from these leaves was re-mobilised in substantial amounts, 3. N and amino acids (AA) accumulated and C/N ratios decreased in nodules of plants with darkened leaves versus excision or untreated controls. These findings further support various indirect evidence that nitrogenase is regulated by an N-feedback mechanism that is not yet fully understood.

  13. Effect of 5' and 3' terminal sequences, overall length, and coding capacity on the accumulation of defective RNAs associated with broad bean mottle bromovirus in planta.

    Science.gov (United States)

    Pogany, J; Romero, J; Bujarski, J J

    1997-02-17

    Broad bean mottle bromovirus (BBMV) was shown to accumulate RNA2-derived defective interfering (DI) RNAs [Romero et al., Virology 194, 576-584 (1993); Pogany et al., Virology 212, 574-586 (1995)]. In this work, we utilize three sets of BBMV RNA2-derived artificial DI RNA constructs to determine factors that affect the accumulation of defective RNAs in planta. One set of deletion constructs was used to localize sequences required for efficient accumulation within the 5' 883 nt and the 3' 387 nt of the DI RNAs. The second set had a gradually increasing size of 3' nested deletions to determine the minimal length required for efficient DI RNA accumulation. The smallest DI RNA still accumulating in plants was found to be 1712 nt long. The third set consisted of frameshift mutants which showed that at least 64.4% of BBMV DI RNA sequences must have the 5' portion of the 2a open reading frame to ensure efficient accumulation. The importance of these factors in the selection of DI RNAs is discussed.

  14. 枯草芽孢杆菌YB5对菜豆根腐病菌的抑菌机制测定及应用%Application and Antagonistic Mechanism of Bacillus subtilis YB5 Gainst Fusarium solani Causing Green Bean Root Rot

    Institute of Scientific and Technical Information of China (English)

    赵长龙; 赵慧妍

    2016-01-01

    Fusarium root rot of bean caused by Fusarium solani f .sp . phaseoli is an important disease of this crop worldwide and has economic impact in green bean producing areas .In order to biological control ,Bacillus subtilis YB5 was a potential bacterial biocontrol agent against F .solani causing green bean root rot .And appli‐cation and antagonistic mechanism of YB5 against F .solani was tested .The results showed that secondary me‐tabolite production by YB5 could effectively inhibit mycelial growth ,spores bearing and germination of F .sola‐ni and was sensitive to high‐temperature .And YB5 bacterial suspension had no effect on green bean seeds ger‐mination and could encourage root development .YB5 secondary metabolite and bacterial suspension could ef‐fectively protect green bean against root rot caused by F .solani .And its control effect was up to 94 .6% by potted plant experiments .%腐皮镰孢引起的菜豆根腐病是一种世界性病害,在菜豆生产中危害严重。为对其有效的生物防治,针对菜豆根腐病利用枯草芽孢杆菌进行了拮抗机制及应用的研究。结果表明:YB5能有效抑制菌丝生长、孢子产生和萌发。YB5的无菌滤液对高温敏感。YB5菌液对种子发芽没有抑制作用,且能促进根系的发育。YB5菌液及无菌滤液对菜豆腐皮镰孢根腐病的盆栽均具有较好的防效,YB5菌液防效可达94.6%。

  15. 具有金属螯合活性的蚕豆蛋白酶解物的制备%Preparation of metal chelating peptides from broad bean protein by enzymatic hydrolysis

    Institute of Scientific and Technical Information of China (English)

    李雪芬; 丁轲; 韩涛; 陈湘宁

    2015-01-01

    目的:探究蚕豆蛋白酶解物的金属螯合活性,研究其金属螯合活性与其抗氧化活性的关系。方法分别采用碱性蛋白酶、中性蛋白酶、木瓜蛋白酶对蚕豆蛋白进行酶解,并测定其水解物的抗氧化活性与金属螯合活性,选用碱性蛋白酶为酶解蚕豆蛋白制取金属螯合肽的最适酶,以酶解产物的水解度、抗氧化活性及金属螯合活性为测定指标获得合适的水解条件。结果3种蛋白酶的蚕豆蛋白酶解产物都有金属螯合活性和抗氧化活性,碱性蛋白酶为酶解蚕豆蛋白的最适酶,最适酶解时间为4 h时,得到的酶解产物金属离子螯合率为88.22%,抑制羟自由基能力为220.70 U/mg,总还原力为0.03 U/mg。结论蚕豆蛋白酶解物具有一定的金属离子螯合活性与抗氧化活性,水解度对蚕豆蛋白酶解物的金属离子螯合活性及抗氧化活性有明显的影响,蚕豆蛋白酶解物的金属螯合活性与总还原力及抑制羟自由基能力呈现显著的正相关性,相关系数分别为0.925、0.968(P<0.01)。%Objective To investigate the metal-chelating abilities of broad bean protein hydrolysates and the relationship between the metal-chelating abilities and the antioxidant activities of protein hydrolysates from broad bean.Methods Broad bean proteins were hydrolyzed by papain protease, neutral protease and alcalase, respectively. Then, the metal-chelating abilities and the antioxidant activities of the hydrolysates were evaluated. To evaluate comprehensive condition of hydrolysis and metal-chelating abilities, alcalase was employed as the suitable protease for studying the hydrolysis from broad bean. Degree of hydrolysis (DH) and the antioxidant activities of broad bean protein hydrolysates were tested. Results All of the hydrolysates showed the metal-chelating ability and antioxidant activities, in that the alcalase had the best effect. The hydrolysates of broad bean protein hydrolyzed for 4 h were

  16. Study on genotoxicity effect of domestic sewage on cell of broad bean root tip%生活污水对蚕豆根尖细胞致畸效应的研究

    Institute of Scientific and Technical Information of China (English)

    李亚青; 李屹

    2013-01-01

    以蚕豆根尖为材料,采用蚕豆根尖细胞的微核试验和染色体畸变试验方法,研究不同取样点生活污水对蚕豆根尖细胞的致畸效应.结果表明:生活污水能诱发微核率升高,而且在一定范围内,其微核率随污染物浓度升高而增加,但高于一定浓度后有下降趋势;不同取样点的污水均使蚕豆根尖细胞有丝分裂指数下降;生活污水还能诱导蚕豆根尖细胞产生较高频率的染色体畸变.所以生活污水蚕豆根尖细胞具有明显的致畸效应.%The paper investigated the genotoxicity effect of domestic sewage from different treatment processes on the cell of broad bean root tip.The micronucleus and chromosome aberration assay were conducted to determine the micronucleus rate and chromosome aberration rate of broad bean root tip cells induced by domestic sewage.The result indicated that domestic sewage could increase the micronucleus rate of the sells of broad bean root tip.Within certain concentration range of pollutant,the micronucleus rate increased with the increase of the concentration of pollutants,but beyond certain range,the micronucleus rate decreased with further increase of the concentration of pollutants.Domestic sewage could decrease the cell mitosis index.Furthermore,it also caused the increase of chromosome aberration rate.The conclusion is that domestic sewage has obvious genotoxicity effect on the cell of broad bean root tip.

  17. Does ascorbate in the mesophyll cell walls form the first line of defence against ozone? Testing the concept using broad bean (Vicia faba L.).

    Science.gov (United States)

    Turcsányi, E; Lyons, T; Plöchl, M; Barnes, J

    2000-05-01

    Broad bean (Vicia faba L.) plants were exposed, in duplicate controlled environment chambers, to charcoal/Purafil-filtered air (CFA-grown plants) or to 75 nmol mol(-1) ozone (O(3)) for 7 h d(-1) (O(3)-grown plants) for 28 d, and then exposed to 150 nmol mol(-1) O(3 )for 8 h. The concentration of ascorbate (ASC) was determined in leaf extracellular washing fluid (apoplast) and in the residual leaf tissue (symplast) after 0, 4 and 8 h acute fumigation, and after a 16 h "recovery" period in CFA. Changes in stomatal conductance were measured in vivo in order to model pollutant uptake, while the light-saturated rate of CO(2) assimilation (A:(sat)) was recorded as an indicator of O(3)-induced intracellular damage. Measurements of A:(sat) revealed enhanced tolerance to 150 nmol mol(-1) O(3) in plants pre-exposed to the pollutant compared with equivalent plants grown in CFA, consistent with the observed reduction in pollutant uptake due to lower stomatal conductance. The concentration of ASC in the leaf apoplast (ASC(apo)) declined upon O(3)-treatment in both CFA- and O(3)-grown plants, consistent with the oxidation of ASC(apo) under O(3)-stress. Furthermore, the decline in ASC(apo) was reversible in O(3)-grown plants after a 16 h "recovery" period, but not in plants grown in CFA. No significant change in the level and/or redox state of ASC in the symplast (ASC(symp)) was observed in plants exposed to 150 nmol mol(-1) O(3), and there was no difference in the constitutive level of ASC(symp) between CFA- and O(3)-grown plants. Model calculations indicated that the reaction of O(3) with ASC(apo) in the leaves of Vicia faba is potentially sufficient to intercept a substantial proportion (30-40%) of the O(3)entering the plant under environmentally-relevant conditions. The potential role of apoplastic ASC in mediating the tolerance of leaves to O(3) is discussed.

  18. Up-regulation and interaction of the plasma membrane H(+)-ATPase and the 14-3-3 protein are involved in the regulation of citrate exudation from the broad bean (Vicia faba L.) under Al stress.

    Science.gov (United States)

    Chen, Qi; Guo, Chuan-Long; Wang, Ping; Chen, Xuan-Qin; Wu, Kong-Huan; Li, Kui-Zhi; Yu, Yong-Xiong; Chen, Li-Mei

    2013-09-01

    Our previous study showed that citrate excretion coupled with a concomitant release of protons was involved in aluminum (Al) resistance in the broad bean. Furthermore, genes encoding plasma membrane (PM) H(+)-ATPase (vha2) and the 14-3-3 protein (vf14-3-3b) were up-regulated by Al in Al-resistant (YD) broad bean roots. In this study, the roles of PM H(+)-ATPase (E.C. 3.6.3.6) and the 14-3-3 protein in the regulation of citrate secretion were further investigated in Al-resistant (YD) and Al-sensitive (AD) broad bean cultivars under Al stress. The results showed that greater citrate exudation was positively correlated with higher activities of PM H(+)-ATPase in roots of YD than AD. Real-time RT-PCR analysis revealed that vha2 was clearly up-regulated by Al in YD but not in AD roots, whereas the transcription levels of vf14-3-3b were elevated in a time-dependent manner in both YD and AD roots. Immunoprecipitation and Western analysis suggested that phosphorylation and interaction with the vf14-3-3b protein of the VHA2 were enhanced in YD roots but not in AD roots with increasing Al treatment time. Fusicoccin or adenosine 5'-monophosphate increased or decreased the interaction between the phosphorylated VHA2 and the vf14-3-3b protein, followed by an enhancement or reduction of the PM H(+)-ATPase activity and citrate exudation in both cultivars under Al stress conditions, respectively. Taken together, these results suggested that Al enhanced the expression and interaction of the PM H(+)-ATPase and the 14-3-3 protein, which thereby led to higher activity of the PM H(+)-ATPase and more citrate exudation from YD plants.

  19. 预糊化替代复合磷酸盐在油炸蚕豆中的应用%Compound phosphate replaced by pre-gelatinizing in the application of frying broad bean

    Institute of Scientific and Technical Information of China (English)

    饶先军; 汪立成; 刘春梅; 袁霞

    2012-01-01

    Compound phosphate replaced by pre-gelatinizing in the application of frying broad bean were applied. The compound phosphate,re-watering and pre-gelatinizing on quality of frying broad bean were studied,and the pre-gelatinizing optimal process parameters were determined through orthogonal experiment.The optimal process parameters were:the re-watering time was 48h, pre-gelatinizing temperature was 80℃, pre-gelatinizing time was 9min .It could keep the shape of broad bean,and it was very crisp and delicious. Pre-gelatinizing could replace the compound phosphate used in production, reducing waste of water resource and the pollution of environment.%运用预糊化技术替代了复合磷酸盐在油炸蚕豆生产中的使用,研究了复水时间、预糊化温度、预糊化时间对油炸蚕豆品质的影响,并采用正交实验确定了最佳优化工艺参数:复水时间48h;预糊化温度80℃;预糊化时间9min。结果表明:蚕豆经过预糊化能保持豆粒完整的外形,油炸后产品酥脆可口;预糊化可以替代复合磷酸盐在生产上的使用,以减少对水资源的浪费和环境的污染。

  20. Dual effects of NO on stomatal movement in broad bean%NO在蚕豆气孔运动中的双重效应

    Institute of Scientific and Technical Information of China (English)

    宋欣媛; 贺军民

    2009-01-01

    以蚕豆叶片下表皮为材料,利用NO释放剂硝普钠(SNP)和S-亚硝基谷胱甘肽(GSNO)研究了不同浓度一氧化氮(NO)对光、暗、过氧化氢(H_2O_2)和脱落酸(ABA)处理下叶片表皮条气孔运动的影响.结果显示,低浓度和高浓度范围内的SNP和GSNO不仅能引起可见光下开放的气孔关闭,而且使暗、H_2O_2或ABA处理下处于关闭状态的气孔的开度进一步减小;中浓度范围内的SNP和GSNO对可见光下开放气孔的开度无显著影响,而能诱导暗、H_2O_2或ABA处理下处于关闭状态的气孔开放.恢复实验表明高浓度范围的SNP和GSNO处理后的气孔不能再次开放,说明其对保卫细胞造成伤害;中浓度以下SNP和GSNO处理后的气孔能够在光或暗下再次开放或关闭.结果表明,NO不仅能诱导气孔关闭,而且能诱导气孔开放,其决定于保卫细胞内的NO浓度.%The effects of different concentrations of nitric oxide (NO) released by NO donors sodium nitroprusside (SNP) and S-nitrosoglutathione (GSNO) on stomatal movement of the abaxial epidermal strip of broad bean (Vicia faba L.) leaves were studied under light, darkness, in presence of H_2O_2 and ABA. The results showed that both SNP and GSNO at low and high concentration could induce not only the closure of opened-stomata under light but also the aperture of closed-stomata under darkness, H_2O_2 or ABA; Both SNP and GSNO at middle range of concentrations have no obvious effect on the aperture of opened-stomata under light, but induce the opening of closed-stomata under darkness, H_2O_2 or ABA. The recovery experiment results further showed that non-specific damage of cells was guarded in the high range of NO donors, but no guard in low and middle ranges of NO donors, because the high range-closed stomata was not reopened under a subsequent light recovery, but the low and middle range-closed or opened stomata could be reopened or reclosed by a subsequent light or dark recovery respectively

  1. Rhizobium paranaense sp. nov., an effective N2-fixing symbiont of common bean (Phaseolus vulgaris L.) with broad geographical distribution in Brazil.

    Science.gov (United States)

    Dall'Agnol, Rebeca Fuzinatto; Ribeiro, Renan Augusto; Delamuta, Jakeline Renata Marçon; Ormeño-Orrillo, Ernesto; Rogel, Marco Antonio; Andrade, Diva Souza; Martínez-Romero, Esperanza; Hungria, Mariangela

    2014-09-01

    Nitrogen (N), the nutrient most required for plant growth, is key for good yield of agriculturally important crops. Common bean (Phaseolus vulgaris L.) can benefit from bacteria collectively called rhizobia, which are capable of fixing atmospheric nitrogen (N2) in root nodules and supplying it to the plant. Common bean is amongst the most promiscuous legume hosts; several described species, in addition to putative novel ones have been reported as able to nodulate this legume, although not always effectively in terms of fixing N2. In this study, we present data indicating that Brazilian strains PRF 35(T), PRF 54, CPAO 1135 and H 52, currently classified as Rhizobium tropici, represent a novel species symbiont of common bean. Morphological, physiological and biochemical properties differentiate these strains from other species of the genus Rhizobium, as do BOX-PCR profiles (less than 60 % similarity), multilocus sequence analysis with recA, gyrB and rpoA (less than 96.4 % sequence similarity), DNA-DNA hybridization (less than 50 % DNA-DNA relatedness), and average nucleotide identity of whole genomes (less than 92.8.%). The novel species is effective in nodulating and fixing N2 with P. vulgaris, Leucaena leucocephala and Leucaena esculenta. We propose the name Rhizobium paranaense sp. nov. for this novel taxon, with strain PRF 35(T) ( = CNPSo 120(T) = LMG 27577(T) = IPR-Pv 1249(T)) as the type strain.

  2. 蚕豆根尖细胞微核技术监测湛河水质状况%Monitoring the Water Qualitv of Zhanhe River bv Micronucleus Technique of Root Tip Cell of Broad Bean

    Institute of Scientific and Technical Information of China (English)

    佘秋生; 郭端强; 田勋; 张亚杰; 郭文龙

    2011-01-01

    The water pollution of Zhanhe river was monitored by micronucleus technique of root tip cell of broad bean and the micronucleus permillage and pollution index of root tip cell of broad bean in water samples from various sampling sites were determined for F test. The results showed that the polluted degree of water body in Zhanhe river got some increment in Mar, ~ May ,the pollution state of water body in beach area was aggravated gradually and the control of water quality needed to be enhanced.%利用蚕豆根尖细胞微核技术监测湛河水质污染状况,测定各样点水样中蚕豆根尖细胞的微核千分率及污染指数,并进行F检验.结果表明,3~5月湛河水体受污染程度有所增加,沿岸水体污染状况逐渐加重,需加强水质治理工作.

  3. Tecnología de producción de haba y características socioeconómicas de productores en Puebla y Tlaxcala Broad bean production technology and socioeconomic characteristics of farmers in Puebla and Tlaxcala

    Directory of Open Access Journals (Sweden)

    Javier Rojas-Tiempo

    2012-02-01

    Full Text Available El objetivo de la investigación fue conocer la tecnología aplicada al cultivo de haba, para la producción de grano en diferentes comunidades de Puebla y Tlaxcala, México; con la finalidad de encontrar las prácticas débiles y las características socioeconómicas esenciales; así como, los caracteres deseables por los productores de una variedad de haba. El trabajo se desarrolló en la región productora de haba en México. Se aplicaron 100 cuestionarios, 20 por comunidad y una entrevista semiestructurada a informantes clave más información de los agricultores, mediante observaciones directas. Predominan los productores con rasgos de campesinado tradicional en el uso de la tecnología de producción de haba, basada en herramientas tradicionales y el uso de animales de trabajo en la preparación del terreno. La fuente de semillas para la siembra, son las variedades locales que ellos siembran año con año. Entre las características socioeconómicas destacan, que 4% es del sexo femenino y la edad promedio es de 49 años. La región productora de haba cuenta con una combinación de productores, con diferentes grados de campesinidad alternado con productores comerciales o en transición de serlo. Los caracteres de interés deseados por sus variedades, son tamaño de semilla grande o mediana, abundantes en flores, vainas y semillas, que sean precoces y resistentes a las principales plagas, enfermedades y sequía.The research objective was to determine the technology applied to the broad bean crop for grain production in different communities of Puebla and Tlaxcala, Mexico, in order to find weak practices and key socioeconomic characteristics; as well as desirable traits by the producers of a variety of bean. The work was developed in the broad bean-producing region in Mexico. 100 questionnaires were applied, 20 per community and a semi-structured interviews with key informants plus information for farmers, through direct observation. Peasant

  4. Effects of Feeding Broad Bean and Dehulling Broad Bean Diets on Growth Performance, Muscle Quality and Blood Physiological-Biochemical Indices of Grass Carp (Ctenopharyngodon idellus)%投喂蚕豆饲料和去皮蚕豆饲料对草鱼生长性能、肌肉品质及血液生理生化指标的影响

    Institute of Scientific and Technical Information of China (English)

    毛盼; 胡毅; 郇志利; 黄云; 余建波; 肖调义

    2014-01-01

    本试验旨在研究投喂蚕豆饲料和去皮蚕豆饲料对草鱼生长性能、肌肉品质及血液生理生化指标的影响。试验选取初始体重为(860±40) g的草鱼450尾,随机分为3组,分别为对照组、蚕豆组和去皮蚕豆组,每组设置3个重复,每个重复放养50尾草鱼。对照饲料参考草鱼商品饲料配方配制,蚕豆饲料和去皮蚕豆饲料分别用蚕豆和去皮蚕豆部分替代对照饲料中的豆粕、菜籽粕及棉籽粕,蚕豆和去皮蚕豆的用量均为80%。试验期为20周。结果表明:与对照组相比,蚕豆组和去皮蚕豆组草鱼的增重率和饲料系数无显著变化(P>0.05),但脏体指数和肝体指数显著降低(P0 . 05 ) , but the viscerosomtic index and hepato-somatic index were significantly reduced ( P <0 . 05 ) . Feeding BB and DBB diets significantly increased the number of red blood cells and white blood cells, the contents of serum glucose, total cholesterol and urea nitro-gen and the activity of serum glutamic-oxal(o)acetic transaminase (P<0. 05), but significantly reduced the activity of serum superoxide dismutase (P <0. 05). Compared with the control group, the muscle moisture content and water loss rate in BB and DBB groups were significantly decreased ( P<0 . 05 ) , but the crude lipid content was significantly increased ( P<0 . 05 ) , the myofibril length and muscular fiber diameter were signifi-cantly raised ( P<0 . 05 ) , and the contents of delicious amino acids and essential amino acids were significant-ly increased ( P<0 . 05 ) . The results indicate that feeding BB and DBB diets have no negative effects on the growth performance, but all can change the muscle quality of grass carp, and there is no necessary association between the change of muscle quality and broad bean skin.

  5. PI3P 和 NO 在 UV-B 诱导蚕豆气孔关闭中的关系%The interactions of PI3P and NO in UV-B-induced stomatal closure of broad bean

    Institute of Scientific and Technical Information of China (English)

    樊彩明; 王静; 胡洁; 贺军民

    2015-01-01

    By stomatal bioassay and measurement of endogenous nitric oxide (NO)level in guard cells,the interactions of NO and phosphatidylinositol 3-phosphate (PI3P)[the product of phos-phatidylinositol 3-kinase (PI3K)]in UV-B-induced stomatal closure were studied in the epidermal strips of abaxial surface of broad bean(Vicia faba L.)leaves.The results showed that both the NO production in guard cells and stomatal closure induced by UV-B were significantly inhibited by PI3K inhibitors wortmannin (WM)and LY294002 (LY).Meanwhile,exogenous NO-relea-sing compound sodium nitroprusside (SNP)could completely reverse the inhibitory effect of LY and WM on the UV-B-induced stomatal closure,and WM and LY could not inhibit exogenous SNP-induced stomatal closure of broad bean.These results indicate that PI3P acts upstream of NO in the signal transduction pathway of UV-B-induced stomatal closure of broad bean.%以蚕豆(Vicia faba L.)叶片下表皮为材料,结合气孔开度分析和保卫细胞内源一氧化氮(NO)水平的测定,研究了 NO 和磷脂酰肌醇3-激酶(PI3K)的催化产物磷脂酰肌醇3-磷酸(PI3P)在紫外线 B(UV-B)诱导气孔关闭中的关系。结果显示:UV-B 辐射诱导蚕豆保卫细胞 NO 产生和气孔关闭的效应能被 PI3K 抑制剂沃曼青霉素(WM)和 LY294002(LY)显著抑制。同时,外源 NO释放剂硝普钠(SNP)处理能完全逆转 WM 和 LY 对 UV-B 诱导气孔关闭的抑制效应,而 WM 和LY 却不能抑制外源 SNP 诱导蚕豆气孔关闭的效应。结果说明,在 UV-B 诱导蚕豆气孔关闭的信号转导途径中 PI3P 的作用在 NO 上游。

  6. Effects of laser pretreatment on cells of broad bean in UV-B-induced damage protection%激光预处理可保护蚕豆细胞免受UV-B辐射的损伤

    Institute of Scientific and Technical Information of China (English)

    齐智; 岳明; 王勋陵

    2000-01-01

    The embryos of broad bean (Vicia faba L.) were irradiated for 5 min by a He-Ne laser (632.8 nm,1.63 J·mm-2) or for 1 min by a CO2 laser (1,060 nm,2.53 J·mm-2).Afterwards they were cultivated in Petri dish in the constant temperature incubator in Knop until the length of epicotyl of broad bean was perhaply 3 cm that could be treated by ultraviolet-B (UV-B) radiation.The epicotyl of broad bean was irradiated for 7 h by 1.02,3.03,4.52 kJ·m-2 UV-B respectively in the ambient condition of 70 μmol·m-2·s-1 photosynthetically active radiation (PAR) in the growth cabinet.According to the changes of content of MDA,ascorbate acid (AsA) and UV-B absorbing compounds (absorbance at 300 nm),the effects of protecting of laser to the epicotyl of broad bean from UV-B radiation were tested.The results showed that laser pretreatment on the embryos could enhance the resistance of UV-B stress in epicotyl.Comparing with the control (without UV-B or laser radiation) and UV-B radiation alone,the MDA content was decreased significantly while AsA content was increased in the condition of laser pretreatment.It was also found that laser pretreatment alone could improve the content of UV-B absorbing compounds.If laser pretreatment followed UV-B radiation,the content of UV-B absorbing compounds was improved higher than laser treatment and UV-B treatment respectively.We suppose that laser pretreatment could enhance stress resistance in plant by a pathway of increasing the content of AsA and UV-B absorbing compounds while decreasing the MDA concentration.%当蚕豆的胚被He-Ne激光(632.8 nm,1.63 J·mm-2)照射5 min或被CO2激光(1060 nm,2.53 J·mm-2) 照射1 min后,将其置入Knop营养液中进行恒温培养.当蚕豆的上胚轴长到大约3 cm时,在光背景(PAR)为70 μmol·m-2·s-1条件下,分别用1.02、3.03、4.52 kJ·m-2的UV-B 辐射蚕豆的上胚轴7 h.根据蚕豆丙二醛(MDA)、抗坏血酸(AsA)和UV-B吸收物的含量变化,来测试激光对UV-B照射蚕豆的上

  7. 响应面法优化速冻蚕豆的微波烫漂工艺%Optimization of the microwave blanching of quick-frozen broad beans using response surface methodology

    Institute of Scientific and Technical Information of China (English)

    陈惠; 唐明霞; 袁春新; 王学军

    2013-01-01

    为掌握蚕豆微波烫漂的最佳工艺,在单因素试验结果的基础上,采用响应面法( RSM )优化能保持较高蚕豆硬度、叶绿素保留率和较低过氧化物酶( POD)相对活性的烫漂条件,得到微波功率、时间的最佳工艺组合。试验结果表明,当微波功率为589 W,时间为67 s时,蚕豆的硬度为3245.17 g,叶绿素保留率为91.12%,POD相对活性为6.08%。%In order to optimize the microwave blanching process of the broad beans , the present study was conducted using the response surface methodology ( RSM) on the basis of single factor test .The results indicated that using RSM to optimize the blanching conditions of microwave power and time could maintain a higher hardness , a higher retention rate of chlorophyll and a lower relative activity of peroxidase ( POD) .Validation test suggested that the hard-ness of broad beans was 3 245.17 g, the retention rate of chlorophyll was 91.12%, and the relative activity of the POD was 6.08%when the blanching condition was set with the microwave power at 589 W and microwave time at 67 s.

  8. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/ brown rot paradigm for wood decay fungi

    Energy Technology Data Exchange (ETDEWEB)

    Riley, Robert; Salamov, Asaf; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitris; Held, Benjamin; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika; Sun, Hui; LaButti, Kurt; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E.; Pisabarro, Antonio; Walton, Jonathan D.; Blanchette, Robert; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David; Grigoriev, Igor V.

    2014-03-14

    Basidiomycota (basidiomycetes) make up 32percent of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white rot/brown rot classification paradigm we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically-informed Principal Components Analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs, but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown rot fungi. Our results suggest a continuum rather than a dichotomy between the white rot and brown rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay.

  9. Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.

    Directory of Open Access Journals (Sweden)

    Ormeño-Orrillo Ernesto

    2012-12-01

    Full Text Available Abstract Background Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 are α-Proteobacteria that establish nitrogen-fixing symbioses with a range of legume hosts. These strains are broadly used in commercial inoculants for application to common bean (Phaseolus vulgaris in South America and Africa. Both strains display intrinsic resistance to several abiotic stressful conditions such as low soil pH and high temperatures, which are common in tropical environments, and to several antimicrobials, including pesticides. The genetic determinants of these interesting characteristics remain largely unknown. Results Genome sequencing revealed that CIAT 899 and PRF 81 share a highly-conserved symbiotic plasmid (pSym that is present also in Rhizobium leucaenae CFN 299, a rhizobium displaying a similar host range. This pSym seems to have arisen by a co-integration event between two replicons. Remarkably, three distinct nodA genes were found in the pSym, a characteristic that may contribute to the broad host range of these rhizobia. Genes for biosynthesis and modulation of plant-hormone levels were also identified in the pSym. Analysis of genes involved in stress response showed that CIAT 899 and PRF 81 are well equipped to cope with low pH, high temperatures and also with oxidative and osmotic stresses. Interestingly, the genomes of CIAT 899 and PRF 81 had large numbers of genes encoding drug-efflux systems, which may explain their high resistance to antimicrobials. Genome analysis also revealed a wide array of traits that may allow these strains to be successful rhizosphere colonizers, including surface polysaccharides, uptake transporters and catabolic enzymes for nutrients, diverse iron-acquisition systems, cell wall-degrading enzymes, type I and IV pili, and novel T1SS and T5SS secreted adhesins. Conclusions Availability of the complete genome sequences of CIAT 899 and PRF 81 may be exploited in further efforts to understand the interaction of tropical

  10. Study on the Formula and Process of Black-Broad Bean Compound Soy Sauce%黑豆蚕豆复合酱油的配方及工艺研究

    Institute of Scientific and Technical Information of China (English)

    郑凤荣; 付成康

    2015-01-01

    The production of compound soy sauce by the technical of solid and liquid fermentation with black soybean and broad bean as material and a quantitative of wheat bran was studied. The optimum technical conditions were determined respectively through single factor experiment and orthogonal test as follows:material ratio was 60 ∶ 20 ∶ 20,under 42 ℃ fermentation temperature ,and the concentration of salt water was 13 ° Be′,with the quantity of salt water was 1∶1.4 (mass ratio).The product showed taste delicious, bright color, aromatic flavor, the physical and chemical indicators had reached the ideal standard.%以黑豆和蚕豆为主要原料,加入一定量麸皮采用固稀发酵技术生产复合型酱油。通过单因素试验和正交试验,以制作出的产品感官指标为检验项目,确定最佳工艺条件:制曲物料配比为60∶20∶20、发酵过程温度为42℃、食盐水浓度为13°Be′、拌盐水量为1∶1.4(质量比)。制得的酱油滋味鲜美、色泽鲜艳、香味浓郁,各项理化指标均达到理想标准。

  11. Phosphorylation and Interaction with the 14-3-3 Protein of the Plasma Membrane H+-ATPase are Involved in the Regulation of Magnesium-Mediated Increases in Aluminum-Induced Citrate Exudation in Broad Bean (Vicia faba. L).

    Science.gov (United States)

    Chen, Qi; Kan, Qi; Wang, Ping; Yu, Wenqian; Yu, Yuzhen; Zhao, Yan; Yu, Yongxiong; Li, Kunzhi; Chen, Limei

    2015-06-01

    Several studies have shown that external application of micromolar magnesium (Mg) can increase the resistance of legumes to aluminum (Al) stress by enhancing Al-induced citrate exudation. However, the exact mechanism underlying this regulation remains unknown. In this study, the physiological and molecular mechanisms by which Mg enhances Al-induced citrate exudation to alleviate Al toxicity were investigated in broad bean. Micromolar concentrations of Mg that alleviated Al toxicity paralleled the stimulation of Al-induced citrate exudation and increased the activity of the plasma membrane (PM) H(+)-ATPase. Northern blot analysis shows that a putative MATE-like gene (multidrug and toxic compound extrusion) was induced after treatment with Al for 4, 8 and 12 h, whereas the mRNA abundance of the MATE-like gene showed no significant difference between Al plus Mg and Al-only treatments during the entire treatment period. Real-time reverse transcription-PCR (RT-PCR) and Western blot analyses suggest that the transcription and translation of the PM H(+)-ATPase were induced by Al but not by Mg. In contrast, immunoprecipitation suggests that Mg enhanced the phosphorylation levels of VHA2 and its interaction with the vf14-3-3b protein under Al stress. Taken together, our results suggest that micromolar concentrations of Mg can alleviate the Al rhizotoxicity by increasing PM H(+)-ATPase activity and Al-induced citrate exudation in YD roots. This enhancement is likely to be attributable to Al-induced increases in the expression of the MATE-like gene and vha2 and Mg-induced changes in the phosphorylation levels of VHA2, thus changing its interaction with the vf14-3-3b protein.

  12. ISOLATION AND IDENTIFICATION OF ROT-CAUSING FUNGI OF WINTER JUJUBE IN STORAGE PERIOD AND SCREENING OF BROAD SPECTRUM ANTAGONIST%冬枣储藏期致腐真菌分离鉴定及广谱拮抗菌株的筛选

    Institute of Scientific and Technical Information of China (English)

    李静琴; 陈亮; 岳贵龙; 蔡静平

    2013-01-01

    Four rot-causing fungi were isolated from the rotten tissues of winter jujube and identified as Rhizomorpha Roth.ex FT, Alternaria tenuissima, Coniothyrium olivaceum and Penicillium expansum. 142 bacteria strains were isolated from different samples by dilution method, and 7 strains with remarkable antagonistic effect against the four rot-causing fungi were screened from the 142 bacteria strains by antagonistic cultivation method, strain LM2303 had the best broad spectrum antagonistic effect, and the inhibition zone widths of strain LM2303 to the four rot-causing fungi were respectively (8.5± 0.5) mm, (8.0± 0.3) mm, (10.3± 0.6) mm and (7.5± 0.9) mm. Based on morphologic observation, physiological-biochemical characteristic analysis and 16S rDNA sequence comparison, strain LM2303 should be Bacillus subtilis. Accordingly, strain LM2303 has significant antagonistic effect against the main rot-causing fungi of winter jujube, thereby laying the foundation for biocontrol of rot-causing fungi on winter jujube during storage.%从不同腐烂病症的冬枣中分离得到致腐真菌4株,经鉴定分别为根菌索菌(Rhizomorpha Roth.ex Fr)、细极链格孢(Alternaria tenuissima)、橄榄色盾壳霉(Coniothyrium olivaceum)、扩展青霉(Penicillium expansum);采用稀释分离法从样品中分离得到细菌菌株142株,采用对峙培养法从中筛选到对4种致腐真菌均具有明显拮抗作用的细菌菌株7株,其中菌株LM2303的广谱拮抗效果最佳,其对上述4种致腐真菌的抑菌带宽度分别为(8.5±0.5) mm、(8.0±0.3)mm、(10.3±0.6) mm和(7.5±0.9) mm;通过形态学观察、生理生化特性分析及16S rDNA序列比对,菌株LM2303应为枯草芽孢杆菌(Bacillus subtilis).菌株LM2303对冬枣主要致腐真菌均具有显著的拮抗作用,为冬枣储藏期致腐真菌生物防控奠定了基础.

  13. Genetic Damage of Root Tip Cells in Broad Bean Plant (Vicia faba) Induced by Water in Liao River Valley%辽河流域水诱发蚕豆根尖细胞遗传损伤的研究

    Institute of Scientific and Technical Information of China (English)

    张利红; 徐成斌; 陈忠林; 苏丹; 王家懿

    2009-01-01

    以辽河流域12个不同断面的河水为诱变剂,运用蚕豆根尖微核检测技术和染色体畸变实验方法,测定蚕豆根尖细胞的有丝分裂指数、微核率和染色体畸变率.结果表明:不同断面的河水均能降低蚕豆根尖细胞有丝分裂指数,能诱发较高频率的微核和染色体畸变,产生染色体断片、核突起和核碎裂.所有样点微核率和染色体畸变率均高于对照组.根据采样点水质污染指数分析町知,福德店水质属重度污染,东辽河、条子河、红庙子水质属中度污染,招苏台河水质属轻度污染.%Water in 12 sections of Liao River Valley was sampled as mutagen and micronucleus test and chromosome aberration assay were used to detect mitotic index,micronucleus ratio and chromosome aberration ratio of root tip cells in broad bean plant(Viciafaba).Results showed that water in different sections can decrease the mitotic index in Vicia faba root tip ceHs,induce higher raftos of either micronucleus or chromosome aberration and produce chromosomal segments,nuclear protuberances and fragments.Micronucleus ratio and chromosome aberration ratio in different sections were higher than those of the control group.Analysis of pollution index in 12 sections showed that water quality Was graded as heavy pollution in Fudedian River,moderate pollution in Dongliao River,Tiaozi River and Hongmiaozi River and light pollution in Zhaosutai River.

  14. Effect of arbuscular mycorrhizal colonization on broad bean straw degradation in a split root experiment%分根装置中丛枝菌根真菌影响蚕豆秸秆降解作用研究

    Institute of Scientific and Technical Information of China (English)

    郭涛; 石孝均; 朱敏; 罗珍

    2014-01-01

    The decomposition of plant residues plays an important role in the cycling of nutrients and sub-strates,especially the carbon-nitrogen cycle,which is influenced by many microorganisms that act in a role of consumer or decomposer and directly or indirectly accelerate the degradation process.The group of microorgan-isms known as,mycorrhizae are recognized as being of special importance as they have a special microhabitat and a unique role.Arbuscular mycorrhizal (AM)fungi can form mutualistic symbiosis with more than 80% of the higher plant species.The contribution of AM to the process of degradation of plant residues varied at differ-ent hierarchical levels (plant root,mycorrhizae within the root and the soil mycelium),although hit should be noted that accompanying bacteria also affect the process.In previous studies,most experiments were carried out with pot or other single compartment techniques,and this made it difficult to clarify the effects of mycorhi-zal symbiosis on degradation of plant residues.In the present study,a split-root technique with four compart-ments was used to quantitatively compare the degradation process..In this experiment,maize (Zeamays)was used as the host plant and was inoculated with the AM fungus,Glomusmosseae(G.m)and cultivated in the split root device with four compartments which were the mycorrhizosphere (M),rhizosphere (R ),hyphas-phere (H)and bulk soil (S).Broad bean (Viciafaba)straw was used as a test plant residue and embedded in the four compartments.Plants were harvested respectively at 20,30,40,50 and 60 days and plant residue deg-radation rate,soil enzymatic activity,soil microbial biomass carbon and nitrogen,and soil respiration were measured in the four compartments.Inoculation with arbuscular mycorrhizal fungi accelerated the broad bean straw degradation in R,M and H with 15.61%,20.54%and 7.74%compare with in the S compartment.The catalase,protease,and acid phosphatase activities were higher in the R,M and H compartments

  15. Disease notes - Bacterial root rot

    Science.gov (United States)

    Bacterial root rot initiated by lactic acid bacteria, particularly Leuconostoc, occurs every year in Idaho sugarbeet fields. Hot fall weather seems to make the problem worse. Although Leuconostoc initiates the rot, other bacteria and yeast frequently invade the tissue as well. The acetic acid bac...

  16. INFLUÊNCIA DA DENSIDADE DE INÓCULO DE Fusarium solani f.sp. phaseoli NA SEVERIDADE DA PODRIDÃO RADICULAR SECA DO FEIJOEIRO EFFECT OF Fusarium solani f.sp. phaseoli INOCULUM DENSITY ON DRY ROOT ROT SEVERITY IN THE COMMON BEAN

    Directory of Open Access Journals (Sweden)

    Gesimária Ribeiro Costa

    2007-09-01

    Full Text Available

    Foram testadas quatro densidades de inóculo de Fusarium solani, em gramas por litro de solo (1,0; 2,0; 4,0 e 8,0 e um tratamento testemunha, em solo tipo Latossolo Vermelho-Escuro, cultivado e não cultivado, com o objetivo de determinar a densidade mínima de inóculo no solo necessária para a ocorrência de podridão radicular seca do feijoeiro. Como variáveis respostas foram avaliadas: número de microorganismos totais do solo, número de propágulos de F. solani, atividade microbiológica total do solo e severidade da doença em plântulas. Os resultados indicaram que a densidade de inóculo do fungo variou com o tipo de solo. Para um solo não cultivado a densidade necessária para causar a doença esteve acima de 5.127 propágulos por grama de solo, enquanto para o solo cultivado a densidade de inóculo para causar doença foi de 3.701 propágulos por grama de solo. Os índices de doença em plântulas cultivadas sob o solo cultivado foram duas vezes superiores ao índice de doença de plântulas sob o solo não cultivado. A atividade microbiológica total nos solos, determinada pela desidrogenase de fluorescina diacetato, não se correlacionou com a população dos microorganismos, indicando que a simples presença desses não implica em que estejam ativos.

    PALAVRAS-CHAVE: Solo supressivo; solo conducivo; Phaseolus vulgaris.

    Four densities of Fusarium solani inoculum (1, 2, 4 and 8 g/L of soil were tested for determining the minimum inoculum density for the occurrence of bean dry root rot, in two soil types. The response variables evaluated were the total number of microorganisms in the soil, the number of F. solani f. sp. phaseoli propagules, total soil microbial activity and seedling disease severity

  17. Peppery Hot Bean Curd

    Institute of Scientific and Technical Information of China (English)

    1997-01-01

    Peppery Hot Bean Curd is a famous dish that originated in Chengdu,Sichuan Province.Dating back to the year under the reign of Emperor Tongzhi during the Qing Dynasty(1862-1875),a woman chef named Chen created this dish.In Chinese it is called Mapo Bean Curd. Ingredients:Three pieces of bean curd,100 grams lean pork,25 grams green soy beans or garlic

  18. Integration of sunflower (Helianthus annuus residues with a pre-plant herbicide enhances weed suppression in broad bean (Vicia faba Integração de resíduos de girassol (Helianthus annuus com herbicida pré-emergente na supressão de plantas daninhas na cultura da fava (Vicia faba

    Directory of Open Access Journals (Sweden)

    I.S Alsaadawi

    2011-12-01

    Full Text Available Field trial was conducted with the aim of utilizing allelopathic crop residues to reduce the use of synthetic herbicides in broad bean (Vicia faba fields. Sunflower residue at 600 and 1,400 g m-2 and Treflan (trifluralin at 50, 75 and 100% of recommended dose were incorporated into the soil alone or in combination with each other. Untreated plots were maintained as a control. Herbicide application in plots amended with sunflower residue had the least total weed count and biomass, which was even better than herbicide used alone. Integration of recommended dose of Treflan with sunflower residue at 1,400 g m-² produced maximum (987.5 g m-2 aboveground biomass of broad bean, which was 74 and 36% higher than control and recommended herbicide dose applied alone, respectively. Combination of herbicide and sunflower residue appeared to better enhance pod number and yield per unit area than herbicide alone. Application of 50% dose of Treflan in plots amended with sunflower residue resulted in similar yield advantage as was noticed with 100% herbicide dose. Chromatographic analysis of residue-infested field soil indicated the presence of several phytotoxic compounds of phenolic nature. Periodic data revealed that maximum suppression in weed density and dry weight synchronized with peak values of phytotoxins observed 4 weeks after incorporation of sunflower residues. Integration of sunflower residues with lower herbicide rates can produce effective weed suppression without compromising yield as a feasible and environmentally sound approach in broad bean fields.O experimento foi realizado com o objetivo de utilizar resíduos agrícolas com potencial alelopático para reduzir o uso de herbicidas sintéticos em fava (Vicia faba. Resíduos de girassol (600 e 1,400 g m-2 e Treflan (50, 75 e 100% da dose recomendada foram incorporados ao solo isoladamente ou em combinação uns com os outros. Parcelas não tratadas foram mantidas como controle. A aplicação de

  19. Baked Bean Curd

    Institute of Scientific and Technical Information of China (English)

    1996-01-01

    Ingredients: Two pieces of tender bean curd, shredded shrimp, minced fat and lean pork, minced ham, minced fresh mushrooms, fried dried shrimps, mashed scallion, ginger and garlic, cooking wine, salad oil, salt, MSG and pepper powder. Directions:

  20. Registration of a small-red dry bean germplasm, TARS-LFR1, with multiple disease resistance and superior performance in low nitrogen soils

    Science.gov (United States)

    Root rots, caused primarily by soil-borne fungi and Oomycetes, are important constraints to common bean production. These diseases are becoming a more serious problem under low-input and low fertility production zones with changing climatic conditions adding another layer of constraints. The objecti...

  1. 7 CFR 29.6039 - Stem rot.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Stem rot. 29.6039 Section 29.6039 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing... INSPECTION Standards Definitions § 29.6039 Stem rot. The deterioration of an uncured or frozen stem...

  2. Phenotypic Variability and Diversity Analysis of Bean Traits of Some Cocoa Hybrids in Nigeria

    Directory of Open Access Journals (Sweden)

    A.V. Oyedokun

    2011-03-01

    Full Text Available It is essential to understand the economic potential and superiority among cocoa hybrids. Therefore, the present study aims at detecting variability among cocoa hybrids for bean index in Nigeria. Dried bean of fourteen genotypes of cocoa were evaluated for their bean values. Analysis of variance (ANOVA was used to understand the variability among the fourteen genotypes and Principal Component Analysis (PCA was employed to identify distinguishing traits and the grouping of the genotypes based on similarities. The fourteen cocoa genotypes were significantly (p≤0.05 different from each other with respect to weight of one bean, bean length, width, thickness, 100 bean weight, bean length to width, length to thickness and width to thickness ratio. All the studied morphometric characters exhibited high (>70% broad sense heritability. G8, the hybrid between T53/5 and N38 was the most superior genotype for bean weight and some other bean characteristics. The mass of seventy-four dried cocoa bean of G8 approximated 100 g. The first three Principal Component axes explained 91% of the total variation and the PCA grouped the fourteen genotypes into four distinct clusters. Genotypes could be selected for specific traits and improvement of traits seemed to be genetically reliable.

  3. Root rot in sugar beet piles at harvest

    Science.gov (United States)

    Sugar beet root rots are not only a concern because of reduced yields, but can also be associated with losses in storage. Our primary sugar beet root rot disease problem in the Amalgamated production area is Rhizoctonia root rot. However, this rot frequently only penetrates a short distance past t...

  4. Identification and Pathogenicity of Phytopathogenic Bacteria Associated with Soft Rot Disease of Girasole Tuber

    Directory of Open Access Journals (Sweden)

    Mamdoh Ewis ISMAIL

    2012-02-01

    Full Text Available During 2010-2011 growing seasons six bacterial isolates were separated from naturally infected girasole plants tubers (Helianthus tuberosus L. cv. Balady, showing soft rot, collected from experimental Farm of the Faculty of Agriculture, in El-Minia University, Egypt. Pathogenicity tests showed various virulence for the bacteria isolated from girasole tubers, found pathogenic. These organisms were characterized as rod-shaped, Gram negative, ?-methyl-d-glucoside medium, reducing substances from sucrose, phos, phatase activity and deep cavities on pectate medium. Otherwise, diagnostic tests suggested that the pathogen was Erwinia carotovora ssp. carotovora. The isolated bacteria caused soft rot of wounded tubers when inoculated into tissues. The bacterial isolates were compared for their degree of pathogenicity as well as for differences in specific symptoms, induced in different hosts. The tested isolates could infect several host ranges, such as fruits of apricot, apple, olive, lemon, squash, eggplant and potato tubers, bulbs and garlic and onion cloves, roots radish, carrot, sweet potato and rape. On the other hand, no symptoms were exhibited on pods of bean and cowpea, faba bean, fruits of pepper and tomato. The extracts of experimentally diseased girasole tubers were active in pectinase and also in caboxymethyl cellulose at pH 6 compared to enzyme activities in healthy tissues. Also, the isolated bacteria increased the total and reducing sugars in infected tissues.

  5. Identification and Pathogenicity of Phytopathogenic Bacteria Associated with Soft Rot Disease of Girasole Tuber

    Directory of Open Access Journals (Sweden)

    Mamdoh Ewis ISMAIL

    2012-02-01

    Full Text Available During 2010-2011 growing seasons six bacterial isolates were separated from naturally infected girasole plants tubers (Helianthus tuberosus L. cv. �Balady�, showing soft rot, collected from experimental Farm of the Faculty of Agriculture, in El-Minia University, Egypt. Pathogenicity tests showed various virulence for the bacteria isolated from girasole tubers, found pathogenic. These organisms were characterized as rod-shaped, Gram negative, ?-methyl-d-glucoside medium, reducing substances from sucrose, phos, phatase activity and deep cavities on pectate medium. Otherwise, diagnostic tests suggested that the pathogen was Erwinia carotovora ssp. carotovora. The isolated bacteria caused soft rot of wounded tubers when inoculated into tissues. The bacterial isolates were compared for their degree of pathogenicity as well as for differences in specific symptoms, induced in different hosts. The tested isolates could infect several host ranges, such as fruits of apricot, apple, olive, lemon, squash, eggplant and potato tubers, bulbs and garlic and onion cloves, roots radish, carrot, sweet potato and rape. On the other hand, no symptoms were exhibited on pods of bean and cowpea, faba bean, fruits of pepper and tomato. The extracts of experimentally diseased girasole tubers were active in pectinase and also in caboxymethyl cellulose at pH 6 compared to enzyme activities in healthy tissues. Also, the isolated bacteria increased the total and reducing sugars in infected tissues.

  6. Water relations in untreated and modified wood under brown-rot and white-rot decay

    DEFF Research Database (Denmark)

    Thybring, Emil Engelund

    2017-01-01

    One key requisite for fungal decay of wood is water within cell walls. While several reviews have focused on the mechanistic relationship between water and decay of wood, this study is the first review of water relations of decayed wood material. Based on a vast compilation of experimental data...... from several literature sources, the water relations of untreated and modified wood decayed by brown-rot and white-rot fungi are examined. The aim is to investigate to what extent observations and assumptions regarding brown-rot and white-rot decay can explain changes in water relations observed during...... and after decay. Although the available experimental data for modified wood is scarce, it indicates that brown-rot and white-rot decay of non-resistant modified wood occurs by similar degradation mechanisms with similar effects on water relations as for untreated wood. From simplistic, mathematical...

  7. Watershed responses to Amazon soya bean cropland expansion and intensification.

    Science.gov (United States)

    Neill, Christopher; Coe, Michael T; Riskin, Shelby H; Krusche, Alex V; Elsenbeer, Helmut; Macedo, Marcia N; McHorney, Richard; Lefebvre, Paul; Davidson, Eric A; Scheffler, Raphael; Figueira, Adelaine Michela e Silva; Porder, Stephen; Deegan, Linda A

    2013-06-05

    The expansion and intensification of soya bean agriculture in southeastern Amazonia can alter watershed hydrology and biogeochemistry by changing the land cover, water balance and nutrient inputs. Several new insights on the responses of watershed hydrology and biogeochemistry to deforestation in Mato Grosso have emerged from recent intensive field campaigns in this region. Because of reduced evapotranspiration, total water export increases threefold to fourfold in soya bean watersheds compared with forest. However, the deep and highly permeable soils on the broad plateaus on which much of the soya bean cultivation has expanded buffer small soya bean watersheds against increased stormflows. Concentrations of nitrate and phosphate do not differ between forest or soya bean watersheds because fixation of phosphorus fertilizer by iron and aluminium oxides and anion exchange of nitrate in deep soils restrict nutrient movement. Despite resistance to biogeochemical change, streams in soya bean watersheds have higher temperatures caused by impoundments and reduction of bordering riparian forest. In larger rivers, increased water flow, current velocities and sediment flux following deforestation can reshape stream morphology, suggesting that cumulative impacts of deforestation in small watersheds will occur at larger scales.

  8. Castor bean organelle genome sequencing and worldwide genetic diversity analysis.

    Directory of Open Access Journals (Sweden)

    Maximo Rivarola

    Full Text Available Castor bean is an important oil-producing plant in the Euphorbiaceae family. Its high-quality oil contains up to 90% of the unusual fatty acid ricinoleate, which has many industrial and medical applications. Castor bean seeds also contain ricin, a highly toxic Type 2 ribosome-inactivating protein, which has gained relevance in recent years due to biosafety concerns. In order to gain knowledge on global genetic diversity in castor bean and to ultimately help the development of breeding and forensic tools, we carried out an extensive chloroplast sequence diversity analysis. Taking advantage of the recently published genome sequence of castor bean, we assembled the chloroplast and mitochondrion genomes extracting selected reads from the available whole genome shotgun reads. Using the chloroplast reference genome we used the methylation filtration technique to readily obtain draft genome sequences of 7 geographically and genetically diverse castor bean accessions. These sequence data were used to identify single nucleotide polymorphism markers and phylogenetic analysis resulted in the identification of two major clades that were not apparent in previous population genetic studies using genetic markers derived from nuclear DNA. Two distinct sub-clades could be defined within each major clade and large-scale genotyping of castor bean populations worldwide confirmed previously observed low levels of genetic diversity and showed a broad geographic distribution of each sub-clade.

  9. Castor bean organelle genome sequencing and worldwide genetic diversity analysis.

    Science.gov (United States)

    Rivarola, Maximo; Foster, Jeffrey T; Chan, Agnes P; Williams, Amber L; Rice, Danny W; Liu, Xinyue; Melake-Berhan, Admasu; Huot Creasy, Heather; Puiu, Daniela; Rosovitz, M J; Khouri, Hoda M; Beckstrom-Sternberg, Stephen M; Allan, Gerard J; Keim, Paul; Ravel, Jacques; Rabinowicz, Pablo D

    2011-01-01

    Castor bean is an important oil-producing plant in the Euphorbiaceae family. Its high-quality oil contains up to 90% of the unusual fatty acid ricinoleate, which has many industrial and medical applications. Castor bean seeds also contain ricin, a highly toxic Type 2 ribosome-inactivating protein, which has gained relevance in recent years due to biosafety concerns. In order to gain knowledge on global genetic diversity in castor bean and to ultimately help the development of breeding and forensic tools, we carried out an extensive chloroplast sequence diversity analysis. Taking advantage of the recently published genome sequence of castor bean, we assembled the chloroplast and mitochondrion genomes extracting selected reads from the available whole genome shotgun reads. Using the chloroplast reference genome we used the methylation filtration technique to readily obtain draft genome sequences of 7 geographically and genetically diverse castor bean accessions. These sequence data were used to identify single nucleotide polymorphism markers and phylogenetic analysis resulted in the identification of two major clades that were not apparent in previous population genetic studies using genetic markers derived from nuclear DNA. Two distinct sub-clades could be defined within each major clade and large-scale genotyping of castor bean populations worldwide confirmed previously observed low levels of genetic diversity and showed a broad geographic distribution of each sub-clade.

  10. Castor Bean Organelle Genome Sequencing and Worldwide Genetic Diversity Analysis

    Science.gov (United States)

    Chan, Agnes P.; Williams, Amber L.; Rice, Danny W.; Liu, Xinyue; Melake-Berhan, Admasu; Huot Creasy, Heather; Puiu, Daniela; Rosovitz, M. J.; Khouri, Hoda M.; Beckstrom-Sternberg, Stephen M.; Allan, Gerard J.; Keim, Paul; Ravel, Jacques; Rabinowicz, Pablo D.

    2011-01-01

    Castor bean is an important oil-producing plant in the Euphorbiaceae family. Its high-quality oil contains up to 90% of the unusual fatty acid ricinoleate, which has many industrial and medical applications. Castor bean seeds also contain ricin, a highly toxic Type 2 ribosome-inactivating protein, which has gained relevance in recent years due to biosafety concerns. In order to gain knowledge on global genetic diversity in castor bean and to ultimately help the development of breeding and forensic tools, we carried out an extensive chloroplast sequence diversity analysis. Taking advantage of the recently published genome sequence of castor bean, we assembled the chloroplast and mitochondrion genomes extracting selected reads from the available whole genome shotgun reads. Using the chloroplast reference genome we used the methylation filtration technique to readily obtain draft genome sequences of 7 geographically and genetically diverse castor bean accessions. These sequence data were used to identify single nucleotide polymorphism markers and phylogenetic analysis resulted in the identification of two major clades that were not apparent in previous population genetic studies using genetic markers derived from nuclear DNA. Two distinct sub-clades could be defined within each major clade and large-scale genotyping of castor bean populations worldwide confirmed previously observed low levels of genetic diversity and showed a broad geographic distribution of each sub-clade. PMID:21750729

  11. Susceptibility of pea, horse bean and bean to viruses in dependence on the age of the inoculated plants

    Directory of Open Access Journals (Sweden)

    Władysław Błaszczak

    2013-12-01

    Full Text Available Three cultivars of pea did not differ in their susceptibility to Cucumber Mosaic Virus (CMV notwithstanding the age of the inoculated plants. But their susceptibility to infection with Bean Yellow Mosaic Virus (BYMV differed. Horse bean cultivars 'Nadwiślański' and 'Major' proved to be less susceptible to Broad Bean True Mosaic Virus (BBTMV when older plants were-inoculated. Two bean cultivars 'Złota Saxa' and 'Earle' appeared to be susceptible to BBTMV only in the phase of developing primary leaves and the age-dependent resistance to infection increased faster in plants of the cv. 'Złota Saxa'. Both cultivars of bean showed also age-dependent resistance to infection by BYMV. All these viruses restricted growth and yield of plants. The decreases were greater when younger plants were inoculated. These dependences appeared most distinctly in pea cv. 'Sześciotygodniowy' infected with CMV and in two cultivars of bean infected with BYMV.

  12. 不同药剂对蚕豆赤斑病综合防控效果分析及综合防控体系研究%Effect Analyzing and Prevention and Control System Building with Different Fungicides to Control Broad Bean Chocolate Spot

    Institute of Scientific and Technical Information of China (English)

    陈新; 袁星星; 崔晓艳; 顾和平; 陈华涛; 张红梅; 刘晓庆; 张智民

    2015-01-01

    Chocolate Spot is one of most serious diseases in broad bean farming in our country, and it is becoming much more threatening with the climate change in recent years.With the support of National Legumes System,we did some research work on it from 201 1 to 2013 and in 8 different farming districts.After the experiments we found that Mancozeb wp,the best in all chemical fungicides,can prevent above 80% of the disease and increase more than 1 6% of the total yield while reduction bacteria,the best in all biological fungicides,can prevent 40% of the disease and increase 8% of the total yield.The experiment also built a prevention and con-trol system ranging from the germplasm selection,building of the warning system to the fun-gicides using,etc.%赤斑病是我国蚕豆上最重要的要病害之一,近几年由于气候变化反常,该病在一些地区发展尤为严重。在国家食用豆产业技术体系的支持下,于2011—2013年对国内8个不同产区蚕豆赤斑病进行药剂筛选试验,化学药剂中80%代森锰锌可湿性粉剂对赤斑病田间综合防效达到80%以上,对蚕豆产量也比对照增产16%以上;生防药剂中裁菌平均防效达到40%以上,蚕豆产量也比对照增产8%左右,起到了较好的防治效果。此外,还建立了包括资源筛选、早期预警机制建立、药剂防治等综合防治手段的立体防控体系。

  13. Transforming Fabry-Pérot resonances into a Tamm mode

    Science.gov (United States)

    Durach, Maxim; Rusina, Anastasia

    2012-12-01

    We propose an optical structure composed of two metal nanolayers enclosing a distributed Bragg reflector (DBR) mirror. The structure is an open photonic system whose bound modes are coupled to external radiation. We apply the special theoretical treatment based on inversion symmetry of the structure to classify its resonances. We show that the structure supports resonances transitional between Fabry-Pérot modes and Tamm plasmons. When the dielectric contrast of the DBR is removed these modes are a pair of conventional Fabry-Pérot resonances. They spectrally merge into a Tamm mode at high contrast. The optical properties of the structure in the frequency range of the DBR stop band, including highly beneficial 50% transmittivity through thick structures with sub-skin-depth metal films, are determined by the hybrid quasinormal modes of the open nonconservative structure under consideration. The results can find a broad range of applications in photonics and optoelectronics, including the possibility of coherent control over optical fields in the class of structures similar to the one proposed here.

  14. Faba bean in cropping systems

    DEFF Research Database (Denmark)

    Steen Jensen, Erik; Peoples, Mark B.; Hauggaard-Nielsen, Henrik

    2010-01-01

    bean may prove to be a key component of future arable cropping systems where declining supplies and high prices of fossil energy are likely to constrain the affordability and use of fertilizers. This will help address the increasing demand by consumers and governments for agriculture to reduce its...... impact on the environment and climate through new, more sustainable approaches to food production. The aims of this paper are to review the role of faba bean in global plant production systems, the requirements for optimal faba bean production and to highlight the beneficial effects of faba bean...

  15. Detection and comparison of fungicide resistance in Botrytis fabae and B.cinerea causing broad-bean chocolate spot disease%两种蚕豆赤斑病菌对常用杀菌剂的抗药性检测及比较

    Institute of Scientific and Technical Information of China (English)

    刘亚慧; 戴德江; 沈鑫; 张传清

    2013-01-01

    Disease samples of broad-bean chocolate spot(BBCS)from Zhejiang,Hubei and Anhui provinces were collected to isolate and identify the pathogens.Resistance of Botrytis fabae and B.cinerea which cause BBCS to fungicides was detected through the mycelial growth rate method.And the fungicide resistance risk of B.fabae and B.cinerea was assessed in vitro.Results showed that a total of 153 isolates were collected and 122 of them were B.fabae with the frequency of 79.7%.The rest 31 isolates were B.cinerea with the frequency of 20.3 %.Thirty-seven high-level carbendazim resistance isolates(9 of them were B.fabae)and 42 low-level iprodione resistance isolates(17 of them were B.fabae)were detected.The EC50 values of pyrimethanil ranged from 0.01 to 5.13μg/mL with a mean value of 0.72±0.15μg/mL.These results indicated that BBCS developed resistance to common fungicides and more serious resistance was developed in B.cinerea than in B.fabae.Moreover,results suggested that the resistance risk of B.cinerea was significantly higher than that of B.fabae in vitro.%对采自浙江、湖北和安徽3省的蚕豆赤斑病样品进行了病原菌的分离和鉴定,采用菌丝生长速率法检测了引起赤斑病的2种病原菌——蚕豆葡萄孢Botrytis fabae和灰葡萄孢B.cinerea的抗药性发生情况,并在离体条件下通过抗药性诱导试验比较了二者的抗药性风险.结果共分离得到153个菌株,其中蚕豆葡萄孢122株(占79.7%),灰葡萄孢31株(占20.3%).共检测到37株多菌灵高水平抗药性菌株(其中蚕豆葡萄孢9株)和42株异菌脲低水平抗药性菌株(其中蚕豆葡萄孢17株);嘧霉胺对153个菌株的EC50值在0.01~5.13μg/mL之间,平均EC50值为0.72±0.15μg/mL;表明蚕豆赤斑病菌对常见杀菌剂已表现出一定的抗药性,且灰葡萄孢的抗药性问题比蚕豆葡萄孢要严重得多.抗药性诱导试验进一步证实,灰葡萄孢的抗药性风险明显高于蚕豆葡萄孢.

  16. New source of bacterial soft rot resistance in potato tubers

    Science.gov (United States)

    Bacterial soft rot caused by Pectobacterium and Dickeya species can cause major losses to the potato (Solanum tuberosum L.) industry, mostly due to tuber rot in storage. There are few germplasm resources for soft rot resistance breeding. Here, we introduce a resistant diploid wild potato relative, M...

  17. Etiology of phomopsis root rot in soybean

    Directory of Open Access Journals (Sweden)

    Valéria Cecília Ghissi

    2014-09-01

    Full Text Available In a survey of damages caused by soybean root rot to crops in the south of Brazil for several years, a root rot caused by Phomopsis sp has been found with increasing frequency. The primary symptoms are seen when the main root is cut longitudinally, including the death of the wood which shows white coloration and well-defined black lines that do not have a defined format. Thus, based on similarity, it has been called geographic root rot due to its aspect resembling irregular lines that separate regions on a map. In isolations, colonies and alpha spores of Phomopsis have prevailed. Pathogenicity test was done by means of inoculation in the crown of plants cultivated in a growth chamber. The geographic symptoms were reproduced in plants and the fungus Phomopsis sp. was reisolated. In soybean stems naturally infected with pod and stem blight, geographic symptoms caused by Phomopsis phaseoli are found. To the known symptoms on stems, pods and grains, that of root rot caused by P. phaseoli is now added.

  18. Postharvest Rhizopus rot on sugar beet

    Science.gov (United States)

    Rhizopus species have been reported as a minor post-harvest rot on sugar beet, particularly under temperatures above 5 deg C. In 2010, Rhizopus was isolated from beets collected from Michigan storage piles in February at a low frequency. However, recent evidence from Michigan has found a high incide...

  19. Irradiated cocoa beans

    Energy Technology Data Exchange (ETDEWEB)

    Ashby, R.; Tesh, J.M.

    1982-11-01

    Groups of 40 male and 40 female CD rats were fed powdered rodent diet containing 25% (w/w) of either non-irradiated, irradiated or fumigated cocoa beans. The diets were supplemented with certain essential dietary constituents designed to satisfy normal nutritional requirements. An additional 40 male and 40 female rats received basal rodent diet alone (ground) and acted as an untreated control. After 70 days of treatment, 15 male and 15 female rats from each group were used to assess reproductive function of the F/sub 0/ animals and growth and development of the F/sub 1/ offspring up to weaning; the remaining animals were killed after 91 days of treatment.

  20. Effects of organic fertilizers on the growth and yield of bush bean, winged bean and yard long bean

    Directory of Open Access Journals (Sweden)

    Mohammad Aminul Islam

    Full Text Available ABSTRACT VC (20%, TC (20% and N:P:K fertilizer (farmer's practice were used to determine the growth and yield attributes of bush bean (Phaseolus vulgaris, winged bean (Psophocarpus tetragonolobus and yard long bean (Vigna unguiculata. Plants grown with VC (20% produced the highest fresh biomass for bush bean (527.55 g m-2, winged bean (1168.61 g m-2 and yard long bean (409.84 g m-2. In all the tested legumes the highest pod weight, pod number, pod dry weight and pod length were found in the VC (20% treatment. Photosynthetic rates in the three legumes peaked at pod formation stage in all treatments, with the highest photosynthetic rate observed in winged bean (56.17 µmol m-2s-1 grown with VC (20%. The highest yield for bush bean (2.98 ton ha-1, winged bean (7.28 ton ha-1 and yard long bean (2.22 ton ha-1 were also found in VC (20% treatment. Furthermore, protein content was highest in bush bean (26.50 g/100g, followed by yard long bean (24.74 g/100g and winged bean (22.04 g/100g, under VC (20% treatment. It can be concluded that legumes grown with VC (20% produced the highest yield and yield attributes.

  1. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR

    Energy Technology Data Exchange (ETDEWEB)

    D`Souza, T.M.; Boominathan, K.; Reddy, C.A. [Michigan State Univ., East Lansing, MI (United States)

    1996-10-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequences of each of the PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. 36 refs., 6 figs., 2 tabs.

  2. 9 CFR 319.310 - Lima beans with ham in sauce, beans with ham in sauce, beans with bacon in sauce, and similar...

    Science.gov (United States)

    2010-01-01

    ... with ham in sauce, beans with bacon in sauce, and similar products. 319.310 Section 319.310 Animals and....310 Lima beans with ham in sauce, beans with ham in sauce, beans with bacon in sauce, and similar products. “Lima Beans with Ham in Sauce,” “Beans with Ham in Sauce,” “Beans with Bacon in Sauce,”...

  3. MANAGEMENT OF ROOT ROT IN AVOCADO TREES

    Directory of Open Access Journals (Sweden)

    SIMONE RODRIGUES DA SILVA

    Full Text Available ABSTRACT Root rot (Phytophthora cinnamomi Rands is one of the most restrictive factors to avocado growing in main producing regions worldwide. In Brazil, scientific reports on the effectiveness of control methods are scarce. The objective of this study was to evaluate the efficiency of gypsum applications and dolomitic limestone to the soil and potassium phosphite sprays in controlling this disease in ‘Hass’ avocado, grown without irrigation. The application of dolomitic limestone or gypsum alone is not effective to recover plants affected by root rot. The application of potassium phosphite, combined or not with dolomitic lime or gypsum enables the partial recovery ‘Hass’ avocado plants affected by the disease.

  4. Development of Phytophthora fruit rot resistant watermelon germplasm lines: USVL489-PFR, USVL782-PFR, USVL203-PFR and USVL020-PFR

    Science.gov (United States)

    Phytophthora capsici, distributed worldwide, is an aggressive pathogen with a broad host range, infecting solanaceous, leguminaceous, and cucurbitaceous crops. Phytophthora fruit rot of watermelon (Citrullus lanatus) caused by Phytophthora capsici was first reported in the U.S. in 1940. Since then...

  5. Rot is a key regulator of Staphylococcus aureus biofilm formation

    Science.gov (United States)

    Mootz, Joe M.; Benson, Meredith A.; Heim, Cortney E.; Crosby, Heidi A.; Kavanaugh, Jeffrey S.; Dunman, Paul M.; Kielian, Tammy; Torres, Victor J.; Horswill, Alexander R.

    2015-01-01

    AUTHOR SUMMARY Staphylococcus aureus is a significant cause of chronic biofilm infections on medical implants. We investigated the biofilm regulatory cascade and discovered that the repressor of toxins (Rot) is part of this pathway. A USA300 community-associated methicillin-resistant S. aureus (CA-MRSA) strain deficient in Rot was unable to form a biofilm using multiple different assays, and we found rot mutants in other strain lineages were also biofilm deficient. By performing a global analysis of transcripts and protein production controlled by Rot, we observed that all the secreted protease genes were upregulated in a rot mutant, and we hypothesized that this regulation could be responsible for the biofilm phenotype. To investigate this question, we determined that Rot bound to the protease promoters, and we observed that activity levels of these enzymes, in particular the cysteine proteases, were increased in a rot mutant. By inactivating these proteases, biofilm capacity was restored to the mutant, demonstrating they are responsible for the biofilm negative phenotype. Finally, we tested the rot mutant in a mouse catheter model of biofilm infection and observed a significant reduction in biofilm burden. Thus S. aureus uses the transcription factor Rot to repress secreted protease levels in order to build a biofilm. PMID:25612137

  6. Healthy food trends -- beans and legumes

    Science.gov (United States)

    ... B-vitamins, iron, folate, calcium, potassium, phosphorus, and zinc. Most beans are also low in fat. Legumes ... pressure, heart rate, and other heart disease and diabetes risks. Beans and legumes contain antioxidants that help ...

  7. NetBeans IDE 8 cookbook

    CERN Document Server

    Salter, David

    2014-01-01

    If you're a Java developer of any level using NetBeans and want to learn how to get the most out of NetBeans, then this book is for you. Learning how to utilize NetBeans will provide a firm foundation for your Java application development.

  8. Chlorotic mottle of bean (Phaseolus vulgaris L.)

    NARCIS (Netherlands)

    Jayasinghe, W.U.

    1982-01-01

    For the past years there have been outbreaks of a disease of bean ( Phaseolus vulgaris L.) in Colombia called bean chlorotic mottle. The etiology of bean chlorotic mottle was not known, but the disease was generally believed to be incited by the same whitefly-transmitted virus that causes variegatio

  9. Lignin as a facilitator, not a barrier, during saccharification by brown rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Schilling, Jonathan S. [Univ. of Minnesota, Minneapolis, MN (United States); Tschirner, Ulrike [Univ. of Minnesota, Minneapolis, MN (United States); Blanchette, Robert A [Univ. of Minnesota, Minneapolis, MN (United States); Filley, Timothy [Purdue Univ., West Lafayette, IN (United States)

    2012-11-28

    This research focused on the biology of a group of wood-degrading fungi that cause brown rot in wood, with particular attention to the potential to mimic this biological approach ex situ for bioprocessing lignocellulosic biomass. Supported by the long-standing theory that these fungi use a two-step oxidative/enzymatic approach during brown rot, our team’s objectives were as follows: 1) to determine the discrete timing of lignin modifications, 2) to correlate these alterations with biocatalyst efficiency and ingress into plant cell walls, and 3) to reproduce modifications prior to saccharification for efficient bioprocessing. The core findings of our research were that 1) lignin modifications occur nearly coincident with enzyme secretion during brown rot and 2) there is no specificity to the benefit that a brown rot pretreatment has on the efficacy of cellulases – it is a general enhancement best predicted by chemical changes to lignin and side-chain hemicellulose sugars. In our work, this meant we could attain and predict broad improvements in saccharification using commercial cellulase cocktails, in some cases more than three-fold of that in untreated biomass. This project was completed with minimal variance from the original project management plan (PMP), resulting in fourteen presentations and posters, four peer-reviewed publications, and one additional publication now in review. The publications have been valuable to other scientists working toward similar goals and have been cited in thirteen peer-reviewed publications written by others since 2010. We are working with ADM to advance application options for industry, building on the lessons learned during this DOE award period.

  10. The 2010 Broad Prize

    Science.gov (United States)

    Education Digest: Essential Readings Condensed for Quick Review, 2011

    2011-01-01

    A new data analysis, based on data collected as part of The Broad Prize process, provides insights into which large urban school districts in the United States are doing the best job of educating traditionally disadvantaged groups: African-American, Hispanics, and low-income students. Since 2002, The Eli and Edythe Broad Foundation has awarded The…

  11. On Applying the Micronucleus Technology of the Root Point of Broad Beans to Monitor the Water Quality in Duyun Rivers%蚕豆根尖微核技术监测剑江都匀市区河段水质

    Institute of Scientific and Technical Information of China (English)

    马媛; 龙俊; 吴莉莉

    2012-01-01

    本文利用蚕豆根尖微核技术监测剑江都匀市区河段水质的污染状况,测定6个断面水样的蚕豆根尖细胞微核千分率(MCN‰)及污染指数(PI),并进行F检测,结果表明,各断面水样均能引起微核率升高,桃溪园、枣园、水厂、彩虹桥、百子桥和文峰园断面的微核千分率分别为6.92%0、6.00‰、9.53%0、11.36‰、6.63%o、5.57%0,P1分别为2.06、1.79、2.83、3.38、1.97、1.66。按照污染指数划分标准,枣园、百子桥和文峰园断面的水质为轻度污染,桃溪园、水厂、彩虹桥断面水质为中度污染。%In this paper, the micronucleus of the root point of brand beans is applied to monitor the pollution situation of water quality in Duyun rivers. On the basis of a mensuration of the MCN%0 and PI of the cell in the root point of brand beans in six water sections and detection of F, the results show that water sample in each water section can cause the rise of MCN%0. The MCN%0 of the water section in Taoxiyuan, Zaoyuan, Water Factory, Rainbow Bridge, Baizi Bridge and Wenfengyuan section are as follows: 6.92 %0, 6.00 %0, 9.53 %0, 11.36 %0, 6.63 %0, 5.57 %0; PI are as follows: 2.06, 1.79, 2.83, 3.38, 1.97, 1.66. According to the PI standards, the water in Zaoyuan, Baizi Bridge and Wen- fengyuan sections is slightly polluted; that in Taoxiyuan, Water Factory and Rainbow Bridge sections is polluted moderately.

  12. Use of Wild Relatives and Closely Related Species to Adapt Common Bean to Climate Change

    Directory of Open Access Journals (Sweden)

    James D. Kelly

    2013-05-01

    Full Text Available Common bean (Phaseolus vulgaris L. is an important legume crop worldwide. However, abiotic and biotic stress limits bean yields to <600 kg ha−1 in low-income countries. Current low yields result in food insecurity, while demands for increased yields to match the rate of population growth combined with the threat of climate change are significant. Novel and significant advances in genetic improvement using untapped genetic diversity available in crop wild relatives and closely related species must be further explored. A meeting was organized by the Global Crop Diversity Trust to consider strategies for common bean improvement. This review resulted from that meeting and considers our current understanding of the genetic resources available for common bean improvement and the progress that has been achieved thus far through introgression of genetic diversity from wild relatives of common bean, and from closely related species, including: P. acutifolius, P. coccineus, P. costaricensis and P. dumosus. Newly developed genomic tools and their potential applications are presented. A broad outline of research for use of these genetic resources for common bean improvement in a ten-year multi-disciplinary effort is presented.

  13. Impact of management strategies in the basal rot, charcoal rots epidemiology and Phaseolus vulgaris L. yield.

    Directory of Open Access Journals (Sweden)

    Ulacio Osorio Dilcia

    2013-02-01

    Full Text Available The effect of chemical, physical, biologycal and cultural strategies individually or combinated were evaluated in the epidemiology of the basal rot (Sclerotium rolfsii, charcoal rot (Macrophomina phaseolina and the Phaseolus vulgaris cv Tacarigua yield at Barinas state from Venezuela. In the experiment, Tebuconazole (Teb was applicated at seed (1 L/Ton and at soil, a los 30 y 60 days after of the sow (1 L/ha; Trichoderma harzianum (Tri was applicated at seed (15 g for each 1.5 k and to 15, 30, 45 y 60 days after of the sow (30 g/10 L of water. On the other hand, soil was solarizated (Sol during 15 days and calcium nitrate (Ca (60 g/10 L of water was applicated each 15 days until 60 days of growth of cultivated plants. Basal rot was registered as far as 42 days after of the sow, showing less of 5.3% in Teb y the combination SolTeb. The hightest incidence of this disease was observed in the treatment Tri with 28.5%, being highter that control (14.5%. Last to 42 days predominated the charcoal rot in the rest of the plants for a total of 100% of incidente in everything the treatments. Nevertheless, Teb showed the hightest yield with 555 k/ha, being different estatistically at treatment TriCa, which showed the lowest yield with 31 k/ha, however, the roots not formed nodules nitrogen uptake in these replications with the fungicide and Ca. It is concluded that S. rolfsii was sensible at action of some of the treatments; but not M. phaseolina; nevertheless, the plants were capables to produce seeds health apparently in treatments in which observed less severity of charcoal rot.

  14. Angus McBean - Portraits

    NARCIS (Netherlands)

    Pepper, T.

    2007-01-01

    Angus McBean (1904-90) was one of the most extraordinary British photographers of the twentieth century. In a career that spanned the start of the Second World War through the birth of the 'Swinging Sixties' to the 1980s, he became the most prominent theatre photographer of his generation and, along

  15. Protein Quality of Irradiated Brazilian Beans

    Energy Technology Data Exchange (ETDEWEB)

    Delincee, Henry; Villavicencio, Anna-Lucia C.H.; Mancini-Filho, Jorge

    1998-06-01

    Beans are a major source of dietary protein in Brazil. However, high losses due to insect infestation occur after each harvest. To combat these losses, radiation processing of beans offers promise as an alternative to chemical treatment, provided the nutritional quality of beans is not impaired by the radiation treatment. Conflicting results have been published about the effect of radiation on the biological value of legume proteins. Therefore, two varieties of Brazilian beans were studied: 1) Phaseolus vulgaris L., var. carioca and 2) Vigna unguiculata (L.) Walp, var. macacar. The beans were irradiated with doses of 0, 0.5, 1.0, 2.5, 5.0 and 10 kGy. Since irradiated beans will be consumed after appropriate storage, the beans under study were stored for 6 months at ambient temperature. Protein quality was measured by a biological assay employing the nitrogen balance approach in weanling rats. The animals were fed with optimally cooked beans, which were the only source of protein ({approx}10%). Nitrogen contents of legumes, diets, animal urine and faeces were determined by Kjeldahl analysis. The indices for apparent protein quality: net protein utilisation, digestibility and biological value were not influenced by irradiation. Thus, radiation treatment of Brazilian beans offers considerable promise as an effective insect disinfestation process, without impairing the biological quality of the valuable bean protein.

  16. Protein Quality of Irradiated Brazilian Beans

    Science.gov (United States)

    Delincée, Henry; Villavicencio, Anna-Lucia C. H.; Mancini-Filho, Jorge

    1998-06-01

    Beans are a major source of dietary protein in Brazil. However, high losses due to insect infestation occur after each harvest. To combat these losses, radiation processing of beans offers promise as an alternative to chemical treatment, provided the nutritional quality of beans is not impaired by the radiation treatment. Conflicting results have been published about the effect of radiation on the biological value of legume proteins. Therefore, two varieties of Brazilian beans were studied: 1) Phaseolus vulgaris L., var. carioca and 2) Vigna unguiculata (L.) Walp, var. macaçar. The beans were irradiated with doses of 0, 0.5, 1.0, 2.5, 5.0 and 10 kGy. Since irradiated beans will be consumed after appropriate storage, the beans under study were stored for 6 months at ambient temperature. Protein quality was measured by a biological assay employing the nitrogen balance approach in weanling rats. The animals were fed with optimally cooked beans, which were the only source of protein (˜10%). Nitrogen contents of legumes, diets, animal urine and faeces were determined by Kjeldahl analysis. The indices for apparent protein quality: net protein utilisation, digestibility and biological value were not influenced by irradiation. Thus, radiation treatment of Brazilian beans offers considerable promise as an effective insect disinfection process, without impairing the biological quality of the valuable bean protein.

  17. The occurrence of root rot and crown rot of rice in Gilan and Zanjan provinces, Iran.

    Science.gov (United States)

    Saremi, H; Okhovat, S M

    2004-01-01

    Root rot and crown rot of rice is one of the important fungal diseases of rice in Gilan and Zanjan provinces, Iran. During 1999--2002, samples of plant and soil around the roots of infected rice plants were collected and used to identify the causal agent. Root and crown parts were surface sterilized with sodium hypochlorite and then cultured on PDA (potato dextrose agar), PPA (pepton pentacholoritobenzene agar) and CLA (carnation leaf agar) media. Soil samples prepared in water agar were used to isolate the pathogen. The causal agent was identified as Fusarium moniliforme. Colonies were initially white but turned violet to grey late. Microconidia were arranged in chain and macroconidia were cylindrical and long with 3-5 septa. The disease was severe in Zanjan province particularly along Ghezel Ozan river where the infection ranged from 70-80%. Root and crown rot was more prevalent in areas where Champa and Gerdeh were being cultivated continuously. On the other hand, Sadri cultivars had relatively less infection. Persistent cultivation of rice and seed sowing method intensified disease development and caused significant economic losses.

  18. Reflective Polyethylene Mulch Reduces Mexican Bean Beetle (Coleoptera: Coccinellidae) Densities and Damage in Snap Beans.

    Science.gov (United States)

    Nottingham, L B; Kuhar, T P

    2016-08-01

    Mexican bean beetle, Epilachna varivestis Mulsant, is a serious pest of snap beans, Phaseolus vulgaris L., in the eastern United States. These beetles are intolerant to direct sunlight, explaining why individuals are typically found on the undersides of leaves and in the lower portion of the plant canopy. We hypothesized that snap beans grown on reflective, agricultural polyethylene (plastic mulch) would have fewer Mexican bean beetles and less injury than those grown on black plastic or bare soil. In 2014 and 2015, beans were seeded into beds of metallized, white, and black plastic, and bare soil, in field plots near Blacksburg, VA. Mexican bean beetle density, feeding injury, predatory arthropods, and snap bean yield were sampled. Reflected light intensity, temperature, and humidity were monitored using data loggers. Pyranometer readings showed that reflected light intensity was highest over metallized plastic and second highest over white plastic; black plastic and bare soil were similarly low. Temperature and humidity were unaffected by treatments. Significant reductions in Mexican bean beetle densities and feeding injury were observed in both metallized and white plastic plots compared to black plastic and bare soil, with metallized plastic having the fewest Mexican bean beetle life stages and injury. Predatory arthropod densities were not reduced by reflective plastic. Metallized plots produced the highest yields, followed by white. The results of this study suggest that growing snap beans on reflective plastic mulch can suppress the incidence and damage of Mexican bean beetle, and increase yield in snap beans.

  19. Kinetics model development of cocoa bean fermentation

    Science.gov (United States)

    Kresnowati, M. T. A. P.; Gunawan, Agus Yodi; Muliyadini, Winny

    2015-12-01

    Although Indonesia is one of the biggest cocoa beans producers in the world, Indonesian cocoa beans are oftenly of low quality and thereby frequently priced low in the world market. In order to improve the quality, adequate post-harvest cocoa processing techniques are required. Fermentation is the vital stage in series of cocoa beans post harvest processing which could improve the quality of cocoa beans, in particular taste, aroma, and colours. During the fermentation process, combination of microbes grow producing metabolites that serve as the precursors for cocoa beans flavour. Microbial composition and thereby their activities will affect the fermentation performance and influence the properties of cocoa beans. The correlation could be reviewed using a kinetic model that includes unstructured microbial growth, substrate utilization and metabolic product formation. The developed kinetic model could be further used to design cocoa bean fermentation process to meet the expected quality. Further the development of kinetic model of cocoa bean fermentation also serve as a good case study of mixed culture solid state fermentation, that has rarely been studied. This paper presents the development of a kinetic model for solid-state cocoa beans fermentation using an empirical approach. Series of lab scale cocoa bean fermentations, either natural fermentations without starter addition or fermentations with mixed yeast and lactic acid bacteria starter addition, were used for model parameters estimation. The results showed that cocoa beans fermentation can be modelled mathematically and the best model included substrate utilization, microbial growth, metabolites production and its transport. Although the developed model still can not explain the dynamics in microbial population, this model can sufficiently explained the observed changes in sugar concentration as well as metabolic products in the cocoa bean pulp.

  20. Transaction costs in beans market in Brazil

    Directory of Open Access Journals (Sweden)

    Paulo Eterno Venâncio Assunção

    2015-05-01

    Full Text Available This paper aimed to evaluate the presence of transaction costs in the beans market in Brazil. Therefore, threshold autoregressive (TAR models were used to check co-integration and the existence of transaction costs in the Brazilian beans market. The results confirmed the presence of transaction costs in the beans market, which are mainly related to the freight component of production, since the markets are often far away from the producing regions.

  1. The Broad Foundations, 2006

    Science.gov (United States)

    Broad Foundation, 2006

    2006-01-01

    The mission of the Broad Foundations is to transform K-12 urban public education through better governance, management, labor relations and competition; make significant contributions to advance major scientific and medical research; foster public appreciation of contemporary art by increasing access for audiences worldwide; and lead and…

  2. Yeasts are essential for cocoa bean fermentation.

    Science.gov (United States)

    Ho, Van Thi Thuy; Zhao, Jian; Fleet, Graham

    2014-03-17

    Cocoa beans (Theobroma cacao) are the major raw material for chocolate production and fermentation of the beans is essential for the development of chocolate flavor precursors. In this study, a novel approach was used to determine the role of yeasts in cocoa fermentation and their contribution to chocolate quality. Cocoa bean fermentations were conducted with the addition of 200ppm Natamycin to inhibit the growth of yeasts, and the resultant microbial ecology and metabolism, bean chemistry and chocolate quality were compared with those of normal (control) fermentations. The yeasts Hanseniaspora guilliermondii, Pichia kudriavzevii and Kluyveromyces marxianus, the lactic acid bacteria Lactobacillus plantarum and Lactobacillus fermentum and the acetic acid bacteria Acetobacter pasteurianus and Gluconobacter frateurii were the major species found in the control fermentation. In fermentations with the presence of Natamycin, the same bacterial species grew but yeast growth was inhibited. Physical and chemical analyses showed that beans fermented without yeasts had increased shell content, lower production of ethanol, higher alcohols and esters throughout fermentation and lesser presence of pyrazines in the roasted product. Quality tests revealed that beans fermented without yeasts were purplish-violet in color and not fully brown, and chocolate prepared from these beans tasted more acid and lacked characteristic chocolate flavor. Beans fermented with yeast growth were fully brown in color and gave chocolate with typical characters which were clearly preferred by sensory panels. Our findings demonstrate that yeast growth and activity were essential for cocoa bean fermentation and the development of chocolate characteristics.

  3. Root rot diseases of sugar beet

    Directory of Open Access Journals (Sweden)

    Jacobsen Barry J.

    2006-01-01

    Full Text Available Root rot diseases of sugar beet caused by Rhizoctonia solani (AG 2-2 IIIB and AG 2-2 IV, R. crocorum, Aphanomyces cochlioides, Phoma betae, Macrophomina phaeseolina, Fusarium oxysporum f.sp. radicis-betae, Pythium aphanidermatum Phytophthora drechsleri, Rhizopus stolonifer, R. arrhizus and Sclerotium rolfsii cause significant losses wherever sugar beets are grown. However, not all these soil-borne pathogens have been reported in all sugar beet production areas. Losses include reduced harvestable tonnage and reduced white sugar recovery. Many of these pathogens also cause post harvest losses in storage piles. Control for diseases caused by these pathogens include disease resistant cultivars, avoidance of stresses, cultural practices such as water management and the use of fungicides.

  4. Phytochemical Evaluation of Moth Bean (Vigna aconitifolia L. Seeds and Their Divergence

    Directory of Open Access Journals (Sweden)

    Neha Gupta

    2016-01-01

    Full Text Available In the present study, phytochemical contents of 25 moth bean (Vigna aconitifolia seed accessions were evaluated. This includes protease inhibitors, phytic acid, radical scavenging activity, and tannins. The studies revealed significant variation in the contents of theses phytochemicals. Presence of photochemical composition was correlated with seed storage proteins like albumin and globulin. Qualitative identification of total seed storage protein abundance across two related moth bean accessions using two-dimensional gel electrophoresis (2D-GE was performed. Over 20 individual protein fractions were distributed over the gel as a series of spots in two moth bean accessions. Seed proteome accumulated spots of high intensity over a broad range of pI values of 3–10 in a molecular weight range of 11–170 kDa. In both seed accessions maximum protein spots are seen in the pI range of 6–8.

  5. Etiology and Epidemiological Conditions Promoting Fusarium Root Rot in Sweetpotato.

    Science.gov (United States)

    Scruggs, A C; Quesada-Ocampo, L M

    2016-08-01

    Sweetpotato production in the United States is limited by several postharvest diseases, and one of the most common is Fusarium root rot. Although Fusarium solani is believed to be the primary causal agent of disease, numerous other Fusarium spp. have been reported to infect sweetpotato. However, the diversity of Fusarium spp. infecting sweetpotato in North Carolina is unknown. In addition, the lack of labeled and effective fungicides for control of Fusarium root rot in sweetpotato creates the need for integrated strategies to control disease. Nonetheless, epidemiological factors that promote Fusarium root rot in sweetpotato remain unexplored. A survey of Fusarium spp. infecting sweetpotato in North Carolina identified six species contributing to disease, with F. solani as the primary causal agent. The effects of storage temperature (13, 18, 23, 29, and 35°C), relative humidity (80, 90, and 100%), and initial inoculum level (3-, 5-, and 7-mm-diameter mycelia plug) were examined for progression of Fusarium root rot caused by F. solani and F. proliferatum on 'Covington' sweetpotato. Fusarium root rot was significantly reduced (P Fusarium spp. revealed the production of fumonisin B1 by F. proliferatum when infecting sweetpotato. This study is a step toward characterizing the etiology and epidemiology of Fusarium root rot in sweetpotato, which allows for improved disease management recommendations to limit postharvest losses to this disease.

  6. Integrating and Processing XML Documents with JavaBeans Components

    Directory of Open Access Journals (Sweden)

    Yin-Wah Chiou

    2003-02-01

    Full Text Available The eXtensible Markup Language (XML and JavaBeans component model have gained wide popularity in the Object Web computing. This paper explores how JavaBeans components can be used to integrate and process the XML documents. It covers Bean Markup Language (BML, XML BeanMaker, XML Bean Suite, and Xbeans. The most powerful JavaBeans connection language is BML, which represents an integration of XML and JavaBeans components to provide a mechanism for implementing active content. XML BeanMaker is used to generate JavaBeans from XML DTD files. XML Bean Suite is a toolkit of JavaBeans components to provide a comprehensive set of functionality to manipulate XML content. The Xbean is a powerful paradigm to process XML-based distributed applications.

  7. Comparative studies on thermochemical characterization of corn stover pretreated by white-rot and brown-rot fungi.

    Science.gov (United States)

    Zeng, Yelin; Yang, Xuewei; Yu, Hongbo; Zhang, Xiaoyu; Ma, Fuying

    2011-09-28

    The effects of white-rot and brown-rot fungal pretreatment on the chemical composition and thermochemical conversion of corn stover were investigated. Fungus-pretreated corn stover was analyzed by Fourier transform infrared spectroscopy and X-ray diffraction analysis to characterize the changes in chemical composition. Differences in thermochemical conversion of corn stover after fungal pretreatment were investigated using thermogravimetric and pyrolysis analysis. The results indicated that the white-rot fungus Irpex lacteus CD2 has great lignin-degrading ability, whereas the brown-rot fungus Fomitopsis sp. IMER2 preferentially degrades the amorphous regions of the cellulose. The biopretreatment favors thermal decomposition of corn stover. The weight loss of IMER2-treated acid detergent fiber became greater, and the oil yield increased from 32.7 to 50.8%. After CD2 biopretreatment, 58% weight loss of acid detergent lignin was achieved and the oil yield increased from 16.8 to 26.8%.

  8. Mung Bean: Technological and Nutritional Potential

    NARCIS (Netherlands)

    Dahiya, P.K.; Linnemann, A.R.; Boekel, van M.A.J.S.; Khetarpaul, N.; Grewal, R.B.; Nout, M.J.R.

    2015-01-01

    Mung bean (Vigna radiata (L.) R.Wilczek) has been intensively researched; scattered data are available on various properties. Data on physical, chemical, food processing, and nutritional properties were collected for whole mung bean grains and reviewed to assess the crop’s potential as food and to s

  9. Weed management strategies for castor bean crops

    Directory of Open Access Journals (Sweden)

    Augusto Guerreiro Fontoura Costa

    2014-04-01

    Full Text Available Castor bean crops are agriculturally relevant due to the quality and versatility of their oil, both for the chemical industry and for biodiesel production. Proper weed management is important for both the cultivation and the yield of castor bean crops; therefore, the intention of the present work is to review pertinent information regarding weed management, including the studies regarding weed interference periods, chemical controls for use in different crop production systems and herbicide selectivity, for castor bean crops. Weed science research for castor bean crops is scarce. One of the main weed management challenges for castor bean crops is the absence of herbicides registered with the Ministry of Agriculture, Livestock and Food Supply (MALFS. Research for viable herbicides for weed control in castor bean crops should be directed by research and/or rural extension institutions, associations and farmers cooperatives, as well as by manufactures, for the registration of these selective herbicides, which would be primarily used to control eudicotyledons in castor bean crops. New studies involving the integration of weed control methods in castor bean also may increase the efficiency of weed management, for both small farmers using traditional crop methods in the Brazilian Northeast region, as well as for areas with the potential for large scale production, using conservation tillage systems, such as the no-tillage crop production system.

  10. Registration of ‘Samurai’ Otebo Bean

    Science.gov (United States)

    ‘Samurai’ otebo bean (Phaseolus vulgaris L.) (Reg. no. CV- , PI ), developed by Michigan State University AgBioResearch was released in 2015 as an upright, full-season cultivar with virus [caused by Bean common mosaic virus (BCMV)] resistance and high-yield potential. Samurai was developed using ped...

  11. Nutritional and health benefits of dried beans.

    Science.gov (United States)

    Messina, Virginia

    2014-07-01

    Dried beans (often referred to as grain legumes) may contribute to some of the health benefits associated with plant-based diets. Beans are rich in a number of important micronutrients, including potassium, magnesium, folate, iron, and zinc, and are important sources of protein in vegetarian diets. In particular, they are among the only plant foods that provide significant amounts of the indispensable amino acid lysine. Commonly consumed dried beans are also rich in total and soluble fiber as well as in resistant starch, all of which contribute to the low glycemic index of these foods. They also provide ample amounts of polyphenols, many of which are potent antioxidants. Intervention and prospective research suggests that diets that include beans reduce low-density lipoprotein cholesterol, favorably affect risk factors for metabolic syndrome, and reduce risk of ischemic heart disease and diabetes. The relatively low bean intakes of North Americans and northern Europeans can be attributed to a negative culinary image as well as to intestinal discomfort attributable to the oligosaccharide content of beans. Cooking practices such as sprouting beans, soaking and discarding soaking water before cooking, and cooking in water with a more alkaline pH can reduce oligosaccharide content. Promotional efforts are needed to increase bean intake.

  12. Performance of the Bean-protein Fiber

    Institute of Scientific and Technical Information of China (English)

    韩光亭; 杜宁; 孙亚宁

    2003-01-01

    The methods in testing the bean-protein fiber and the standards used were simply introduced. The fiber's mechanical and chemical performances were further analyzed. And the correlative performance of the bean-protein fibers and other natural fibers have been compared, then full knowledge of the fiber's performance was concluded.

  13. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot.

    Science.gov (United States)

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-12-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30 °C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other important rice diseases such as blast and bacterial blight, no genes for complete resistance to brown spot, bacterial seedling rot or bacterial grain rot have yet been discovered. Thus, rice breeders have to use partial resistance, which is largely influenced by environmental conditions. Recent progress in molecular genetics and improvement of evaluation methods for disease resistance have facilitated detection of quantitative trait loci (QTLs) associated with resistance. In this review, we summarize the results of worldwide screening for cultivars with resistance to brown spot, bacterial seedling rot and bacterial grain rot and we discuss the identification of QTLs conferring resistance to these diseases in order to provide useful information for rice breeding programs.

  14. Repression of hla by rot is dependent on sae in Staphylococcus aureus.

    Science.gov (United States)

    Li, Dongmei; Cheung, Ambrose

    2008-03-01

    The regulatory locus sae is a two-component system in Staphylococcus aureus that regulates many important virulence factors, including alpha-toxin (encoded by hla) at the transcriptional level. The SarA homologs Rot and SarT were previously shown to be repressors of hla in selected S. aureus backgrounds. To delineate the interaction of rot and sae and the contribution of sarT to hla expression, an assortment of rot and sae isogenic single mutants, a rot sae double mutant, and a rot sae sarT markerless triple mutant were constructed from wild-type strain COL. Using Northern blot analysis and transcriptional reporter gene green fluorescent protein, fusion, and phenotypic assays, we found that the repression of hla by rot is dependent on sae. A rot sae sarT triple mutant was not able to rescue the hla defect of the rot sae double mutant. Among the three sae promoters, the distal sae P3 promoter is the strongest in vitro. Interestingly, the sae P3 promoter activities correlate with hla expression in rot, rot sae, and rot sae sarT mutants of COL. Transcriptional study has also shown that rot repressed sae, especially at the sae P3 promoter. Collectively, our data implicated the importance of sae in the rot-mediated repression of hla in S. aureus.

  15. Enterprise JavaBeans 31

    CERN Document Server

    Rubinger, Andrew

    2010-01-01

    Learn how to code, package, deploy, and test functional Enterprise JavaBeans with the latest edition of this bestselling guide. Written by the developers of JBoss EJB 3.1, this book not only brings you up to speed on each component type and container service in this implementation, it also provides a workbook with several hands-on examples to help you gain immediate experience with these components. With version 3.1, EJB's server-side component model for building distributed business applications is simpler than ever. But it's still a complex technology that requires study and lots of practi

  16. 21 CFR 184.1343 - Locust (carob) bean gum.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Locust (carob) bean gum. 184.1343 Section 184.1343... Listing of Specific Substances Affirmed as GRAS § 184.1343 Locust (carob) bean gum. (a) Locust (carob) bean gum is primarily the macerated endosperm of the seed of the locust (carob) bean tree,...

  17. Key odorants in cured Madagascar vanilla beans (Vanilla planiforia) of differing bean quality.

    Science.gov (United States)

    Takahashi, Makoto; Inai, Yoko; Miyazawa, Norio; Kurobayashi, Yoshiko; Fujita, Akira

    2013-01-01

    The odor-active volatiles in Madagascar vanilla beans (Vanilla planiforia) of two grades, red whole beans as standard quality and cuts beans as substandard quality, were characterized by instrumental and sensory analyses. The higher contents of vanillin and β-damascenone in red whole beans than in cuts beans respectively contributed to significant differences in the sweet and dried fruit-like notes, while the higher contents of guaiacol and 3-phenylpropanoic acid in cuts beans than in red whole beans respectively contributed to significant differences in the phenolic and metallic notes. A sensory evaluation to compare red whole beans and their reconstituted aroma characterized both samples as being similar, while in respect of the phenolic note, the reconstituted aroma significantly differed from the reconstituted aroma with guaiacol added at the concentration ratio of vanillin and guaiacol in cuts beans. It is suggested from these results that the concentration ratio of vanillin and guaiacol could be used as an index for the quality of Madagascar vanilla beans.

  18. Evaluation of three pinto bean varieties under drought and irrigation in Durango, Mexico.

    Directory of Open Access Journals (Sweden)

    Aurelio Pedroza-Sandoval

    2015-12-01

    Full Text Available The aim of this study was to identify the behavioral response in growth and physiology on three bean varieties under irrigation and drought. The study was conducted in 2014 at the experimental campus from the Autonomous University of Chapingo, Regional University Unit of the Arid Zones, Durango, Mexico. A randomized block design with three replications in a split plot arrangement was used. The plots were the soil moisture contents: favorable, near to Field Capacity (FC: 22-26% and unfavorable, near to Permanent Wilting Point (PWP: 16-20%; subplots were varieties of beans: Pinto Centauro, Pinto Americano, and Pinto Saltillo. The variety Pinto Centauro had the greatest plant height (10.2 cm, vegetation cover (155.1 cm2, and dry matter production per plant (5.2 g and, physiologically, it showed an outstanding water use efficiency (15.8 μmol CO2: μmol H20. The variety Pinto Americano was the most stable in growth and development when changing from the favorable moisture condition (CC to the hydric stress condition (PWP, which makes it more viable under restrictive water availability conditions, but also more susceptible to root rot, associated to soil pathogens.

  19. Jasmonic acid and salicylic acid inhibit growth of three sugarbeet storage rot pathogens

    Science.gov (United States)

    Storage rots contribute to postharvest losses by consuming sucrose and increasing carbohydrate impurities that increase sugar loss to molasses during processing. They also increase root respiration rate, which causes additional sucrose loss and contributes to pile warming. Currently, storage rots ...

  20. Control of storage rot by induction of plant defense mechanisms using jasmonic acid and salicylic acid

    Science.gov (United States)

    Storage rots contribute to sugarbeet postharvest losses by consuming sucrose and producing carbohydrate impurities that increase sugar loss to molasses. Presently, storage rots are controlled by cooling storage piles. This method of control, however, requires favorable weather conditions for stora...

  1. DEGRADATION OF TEXTILE DYES BY WHITE ROT BASIDIOMYCETES

    Directory of Open Access Journals (Sweden)

    B.P. PARMAR, P.N. MERVANA B.R.M. VYAS*

    2014-12-01

    Full Text Available ABSTRACT: Dyes released by the textile industries pose a threat to environmental quality. Ligninolytic white-rot basidiomycetes can effectively degrade colored effluents and conventional dyes. White-rot fungi produce various isoforms of extracellular oxidases including laccase, Mn peroxidase and lignin peroxidase (LiP, which are involved in the degradation of lignin in their natural lignocellulosic substrates.  The textile industry, by far the most avid user of synthetic dyes, is in need of eco-efficient solutions for its colored effluents. White rot basidiomycetous fungi comprise the only group of organisms known to completely degrade lignin. Ligninolytic enzymes have potential applications in a large number of fields, including the chemical, fuel, food, agricultural, paper, textile, cosmetic industrial sectors and more. This ligninolytic system of white-rot fungi is also directly involved in the degradation of various xenobiotic compounds apart from textile dyes. Their capacities to remove xenobiotic substances make them a useful tool for bioremediation purposes. This paper reviews involvement of ligninolytic enzymes of white rot basidiomycetes in the degradation of textiles dyes and xenobiotic compounds for their industrial and biotechnological applications.

  2. Reaction of Cauliflower Genotypes to Black Rot of Crucifers

    Science.gov (United States)

    da Silva, Lincon Rafael; da Silva, Renan César Dias; Cardoso, Atalita Francis; de Mello Pelá, Gláucia; Carvalho, Daniel Diego Costa

    2015-01-01

    This study aimed to evaluate six cauliflower genotypes regarding their resistance to black rot and their production performance. To do so, it was conducted two field experiments in Ipameri, Goiás, Brazil, in 2012 and 2013. It was used a randomized block design, with four replications (total of 24 plots). Each plot consisted of three planting lines 2.5 m long (six plants/line), spaced 1.0 m apart, for a total area of 7.5 m2. Evaluations of black rot severity were performed at 45 days after transplanting, this is, 75 days after sowing (DAS), and yield evaluations at 90 to 105 DAS. The Verona 184 genotype was the most resistant to black rot, showing 1.87 and 2.25% of leaf area covered by black rot symptom (LACBRS) in 2012 and 2013. However, it was not among the most productive materials. The yield of the genotypes varied between 15.14 and 25.83 t/ha in both years, Lisvera F1 (21.78 and 24.60 t/ha) and Cindy (19.95 and 23.56 t/ha) being the most productive. However, Lisvera F1 showed 6.37 and 9.37% of LACBRS and Cindy showed 14.25 and 14.87% of LACBRS in 2012 and 2013, being both considered as tolerant to black rot. PMID:26060437

  3. Reaction of Cauliflower Genotypes to Black Rot of Crucifers

    Directory of Open Access Journals (Sweden)

    Lincon Rafael da Silva

    2015-06-01

    Full Text Available This study aimed to evaluate six cauliflower genotypes regarding their resistance to black rot and their production performance. To do so, it was conducted two field experiments in Ipameri, Goiás, Brazil, in 2012 and 2013. It was used a randomized block design, with four replications (total of 24 plots. Each plot consisted of three planting lines 2.5 m long (six plants/line, spaced 1.0 m apart, for a total area of 7.5 m². Evaluations of black rot severity were performed at 45 days after transplanting, this is, 75 days after sowing (DAS, and yield evaluations at 90 to 105 DAS. The Verona 184 genotype was the most resistant to black rot, showing 1.87 and 2.25% of leaf area covered by black rot symptom (LACBRS in 2012 and 2013. However, it was not among the most productive materials. The yield of the genotypes varied between 15.14 and 25.83 t/ha in both years, Lisvera F1 (21.78 and 24.60 t/ha and Cindy (19.95 and 23.56 t/ha being the most productive. However, Lisvera F1 showed 6.37 and 9.37% of LACBRS and Cindy showed 14.25 and 14.87% of LACBRS in 2012 and 2013, being both considered as tolerant to black rot.

  4. Maize Stalk Rot and Ear Rot in China%中国玉米茎基腐病和穗腐病研究进展

    Institute of Scientific and Technical Information of China (English)

    徐书法; 陈捷; 高增贵; 邹庆道; 纪明山; 刘海南

    2006-01-01

    This review provides a broad overview of etiology, mechanism of pathogenesis and host resistance and IPM strategies involved in maize stalk rot and ear rot diseases in China. Some different viewpoints in the past are discussed in etiology of stalk rot occurring in China. The relation of both diseases is particularly evaluated based on Fusarium polymorphism analysis at the level of soluble protein, serology, isozymes and DNA, which are also further analyzed in accordance with the knowledge obtained by tracing pathogen infection process within the host root and stem tissue and trapping airborne spores nearby corn plants in the field. The recent researches of both diseases are summarized in physiological and biochemical mechanism of host resistance and resistant genetics, as well as IPM measures centered mainly in the application of biological control agents are summarized.%本文综述了我国在玉米茎基腐病和穗腐病病原学、致病性和寄主抗性机制与综合治理的研究进展.深入探讨了以往我国学者关于引起茎基腐病病原学的不同观点.根据2种病害的病原镰孢菌在可溶性蛋白质、血清学、同功酶和DNA等不同水平的多态性分析,镰孢菌在寄主根和茎组织内侵染过程示踪和孢子捕捉试验结果,重点讨论了2种镰孢菌病害在病原学侵染规律方面的相互关系,概述了2种病害寄主抗性生理生化机理、抗性遗传和以生物防治为核心的综合治理措施研究进展.

  5. Genetic control of the seed coat colour of Middle American and Andean bean seeds.

    Science.gov (United States)

    Possobom, Micheli Thaise Della Flora; Ribeiro, Nerinéia Dalfollo; Zemolin, Allan Emanoel Mezzomo; Arns, Fernanda Daltrozo

    2015-02-01

    Seed coat colour of bean seeds is decisive for acceptance of a cultivar. The objectives of this research were to determine whether there is maternal effect for "L", a* and b* colour parameters in Middle American and Andean bean seeds; to obtain estimates of heritability and gain with selection for "L", a* and b* values; and select recombinants with the seed coat colour required by the market demand. Thus, controlled crossings were carried out between the Middle American lines CNFP 10104 and CHC 01-175, and between the Andean lines Cal 96 and Hooter, for obtaining F1, F1 reciprocal, F2 and F2 reciprocal generations for each hybrid combination. Parents and generations were evaluated in two field experiments (2012 normal rainy and 2013 dry seasons) in the state of Rio Grande do Sul, Brazil. Seed coat colour was quantified with a portable colorimeter. Genetic variability for "L" (luminosity), chromaticity a* (green to red shade), and chromaticity b* (blue to yellow shade) values was observed in seeds with F2 seed coat of Middle American and Andean beans. "L", a* and b* values in bean seeds presented maternal effects. High broad-sense heritability are observed for luminosity (h(2)b: 76.66-95.07%), chromaticity a* (h(2)b: 73.08-89.31%), and chromaticity b* (h(2)b: 88.63-92.50%) values in bean seeds. From the crossings, it was possible to select bean seeds in early generation for the black group, and for carioca and cranberry types (dark or clear background) which present the colour required by the market demand.

  6. Biological Control of Phacidiopycnis Rot in ‘d’Anjou’ Pears

    Science.gov (United States)

    Phacidiopycnis rot, caused by Phacidiopycnis piri, is a recently reported postharvest fruit rot disease of pears (Pyrus) in the U.S. and a major disease of ‘d’Anjou’ pears grown in Washington State. Phacidiopycnis rot can originate from infection of wounds on the fruit. In this study, two biocontrol...

  7. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry

    NARCIS (Netherlands)

    Eikemo, H.; Klemsdal, S.S.; Riisberg, I.; Bonants, P.J.M.; Stensvand, A.; Tronsmo, A.M.

    2004-01-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan, Australia

  8. Black rot of cabbage in The Netherlands: studies on spatial and temporal development.

    NARCIS (Netherlands)

    Kocks, C.G.

    1998-01-01

    Black rot in cabbage is caused by the bacterium Xanthomonas campestris pv. campestris . An exploratory survey at farm level suggested that major aspects contributing to black rot development are cultivar, initial inoculum, refuse management, origin of transplants, and seed quality. Black rot develop

  9. The use of white-rot fungi as active biofilters

    Energy Technology Data Exchange (ETDEWEB)

    Braun-Luellemann, A.; Johannes, C.; Majcherczyk, A.; Huettermann, A. [Univ. Goettingen (Germany). Forstbotanisches Inst.

    1995-12-31

    White-rot fungi, growing on lignocellulosic substrates, have been successfully used as active organisms in biofilters. Filters using these fungi have a very high biological active surface area, allowing for high degrees of retention, a comparatively low pressure drop, and a high physical stability. The unspecific action of the extracellular enzymes of the white-rot fungi allows for the degradation of a wide variety of substances by the same organism. Degradation of several compounds in the gas phase by the white-rot fungi Trametes versicolor, Pleurotus ostreatus, Bjerkandera adusta, and Phanerochaete chrysosporium was tested. Among the aromatic solvents, styrene was the compound that was most readily degraded, followed by ethylbenzene, xylenes, and toluene. Tetrahydrofuran and dichloromethane were also degraded, whereas dioxane could not be attacked by fungi under the conditions used. Acrylonitrile and aniline were degraded very well, whereas pyridine was resistant to degradation. The process for removing styrene is now in the scaling-up stage.

  10. Decay threshold of acetylated rattan (Calamus manan) against soft rot

    Institute of Scientific and Technical Information of China (English)

    Norul Hisham Hamid; Mike Hale

    2013-01-01

    We investigated the resistance of acetylated rattan against soft rot and other soil inhabiting micro-organisms in comparison with wood of beech and Scots pine.Calamus manan of 10 and 13 years old under rubber tree canopy was acetylated to different levels by reaction times (0.25 to 30 hours) and was tested for soft rot decay for 32 weeks.Acetylated rattan at decay protection thresholds of 15.4% and 16.2% weight gain (WG) were fully protected,as shown by both weight loss and strength loss criteria.The static bending properties of untreated rattan decayed by soft rot were significantly lower than for acetylated rattan.

  11. BIOCHEMICAL PULPING OF REED PRETREATED BY WHITE ROT FUNGI

    Institute of Scientific and Technical Information of China (English)

    ShiyuFu; AniwarApiz; HuaiyuZhan

    2004-01-01

    The Soda-AQ pulps were made from reed pretreated by white rot fungi Panus conchatus. Cyathus stercoreus and Pleurotus florida respectively. It was found that kappa number decreased and the brightness increased for Soda-AQ pulps from the reed treated by Pleurotus florida and Panus conchatus, but it was reverse for the pulp from reed treated by Cyathus stercoreus. The result indicated that white rot fungi Pleurotus .florida and Panus conchatus were selective to degrade lignin inreed, which were good for biopulping, but Cyathus stercoreus was preferential to degrade cellulose, which was not good for biopulping.

  12. BIOCHEMICAL PULPING OF REED PRETREATED BY WHITE ROT FUNGI

    Institute of Scientific and Technical Information of China (English)

    Shiyu Fu; Aniwar Apiz; Huaiyu Zhan

    2004-01-01

    The Soda-AQ pulps were made from reed pretreated by white rot fungi Panus conchatus,Cyathus stercoreus and Pleurotus florida respectively. It was found that kappa number decreased and the brightness increased for Soda-AQ pulps from the reed treated by Pleurotus florida and Panus conchatus, but it was reverse for the pulp from reed treated by Cyathus stercoreus. The result indicated that white rot fungi Pleurotus florida and Panus conchatus were selective to degrade lignin in reed, which were good for biopulping, but Cyathus stercoreus was preferential to degrade cellulose,which was not good for biopulping.

  13. Phytophthora Root and Crown Rot on Apples in Bulgaria

    Directory of Open Access Journals (Sweden)

    Mariana Nakova

    2010-01-01

    Full Text Available Phytophthora is a genus of Oomycota responsible for some of the most serious diseases with great economic impact (Judelson and Blanco, 2005. While 54 species were found in the 20th century (Erwin and Ribeiro, 1996 another 51-54 new species have been identified(Brasier, 2008 since the year 2000. They are spread worldwide and have broad range of host plants – fruit trees, citrus, forest and park species. Phytophthora can cause serious damages in orchards and nurseries of apples, cherries, etc. In Bulgaria they have been found first on young apples and cherries (1998-1999 in Plovdiv region (Nakova, 2003. Surveys have been done for discovering disease symptoms in Plovdiv and Kjustendil regions. Isolates have been obtained from infected plant material (roots and stem bases applying baiting bioassay (green apples, variety Granny Smith and/or PARP 10 selective media. Phytophthora strains were identified based on standard morphology methods – types of colonies on PDA, CMA, V 8, type and size of sporangia, oogonia and antheridia, andoospores. Cardial temperatures for their growth were tested on CMA and PDA.For molecular studies, DNA was extracted from mycelium using the DNA extraction kit.DNA was amplified using universal primers ITS 6 and ITS 4. Amplification products concentrations were estimated by comparison with the standard DNA. Sequencing was done at the Scottish Crop Research Institute (SCRI, Dundee, Scotland. Phytophthora root and crown rot symptoms first appear in early spring. Infected trees show bud break delay, have small chlorotic leaves, and branches die all of a sudden. Later symptoms are found in August-September. Leaves of the infected trees show reddish discoloration and drop down. Both symptoms are connected with lesions (wet, necrotic in appearance at stem bases of the trees.Disease spread was 2-3% in most gardens, only in an apple orchard in Bjaga (Plovdiv region it was up to 8-10%. Morphologically, the isolates acquired from

  14. Market strategies for Central American dry beans.

    OpenAIRE

    Mertínez, Lourdes; Bernsten, Richard; Zamora, Miguel

    2004-01-01

    In the past few years, the dry bean sub-sector in CentralAmerica has witnessed many dynamic changes. Unless wefind ways to increase the competitiveness of the regionalbean sub-sector, Central American countries will likelyexperience significant negative social and economic impacts,especially since these countries are facing the challenge ofadjusting to new open markets, such as the Central AmericanFree Trade Agreement (CAFTA). Bean traders, retailers, andknowledgeable government official in C...

  15. Repression of hla by rot Is Dependent on sae in Staphylococcus aureus▿

    OpenAIRE

    Li, Dongmei; Cheung, Ambrose

    2008-01-01

    The regulatory locus sae is a two-component system in Staphylococcus aureus that regulates many important virulence factors, including alpha-toxin (encoded by hla) at the transcriptional level. The SarA homologs Rot and SarT were previously shown to be repressors of hla in selected S. aureus backgrounds. To delineate the interaction of rot and sae and the contribution of sarT to hla expression, an assortment of rot and sae isogenic single mutants, a rot sae double mutant, and a rot sae sarT m...

  16. Dietary arsenic exposure in Brazil: The contribution of rice and beans.

    Science.gov (United States)

    Ciminelli, Virginia S T; Gasparon, Massimo; Ng, Jack C; Silva, Gabriela C; Caldeira, Claudia L

    2017-02-01

    The human health risk associated with arsenic in food in Southeast Brazil was quantified. Based on the most commonly consumed food types in the Brazilian diet, the maximum inorganic As (iAs) daily intake from food (0.255 μg kg(-1) body weight per day) is approximately 9% of the Benchmark Dose Lower Limit (BMDL0.5) of 3 μg kg(-1) body weight per day set by the World Health Organization (WHO) and Food and Agriculture Organization (FAO) Joint Expert Committee in Food Additives (JECFA). When water is included, the contribution of food to the total intake varies from 96.9% to 39.7%. Rice and beans, the main Brazilian staple food, contribute between 67 and 90% of the total As intake from food (46-79% from rice and 11-23% from beans). The substantial contribution of beans to total As food intake is reported for the first time. The broad range of As concentrations in rice and beans highlights the variable and potentially large contribution of both to As food intake in places where diet consists largely of these two food categories.

  17. ARTICLE - Inbreeding depression in castor bean (Ricinus communis L. progenies

    Directory of Open Access Journals (Sweden)

    Milton Krieger

    2012-12-01

    Full Text Available The purpose of this study was to investigate inbreeding depression (DE in castor bean. From a population derived from the Guarani cultivar, 60 mother plants were sampled. Three types of progenies were obtained from each one: from self-pollination (AU, from crosses (CR and from open pollination (PL. Grain yield of the progenies was evaluated in two locations. There was a strong interaction of progenies x locations, which led to obtaining estimates within each location. Broad variation was observed in inbreeding depression, with mean values of 6.7% and 13.4%, comparing AU progenies with PL progenies. It was observed that the population has high potential for selecting promising inbred lines. The frequency of mother plants generating progenies with simultaneous high general combination capacity and low inbreeding depression was low. Recurrent selection will increase the occurrence of parent plants associating these two properties, which is necessary for obtaining superior synthetic varieties.

  18. OXIDATION OF PERSISTANT ENVIRONMENTAL POLLUTANTS BY A WHITE ROT FUNGUS

    Science.gov (United States)

    The white rot fungus Phanerochaete chrysosporium degraded DDT [1,1,-bis(4-chlorophenyl)-2,2,2-trichloroethane], 3,4,3',4'-tetrachlorobiphenyl, 2,4,5,2',-4',5'-hexachlorobiphenyl, 2,3,7,8-tetrachlorodibenzo-p-dioxin, lindane (1,2,3,4,5,6-hexachlorocylohexane), and benzo[a]pyrene t...

  19. Rice Sheath Rot: An Emerging Ubiquitous Destructive Disease Complex.

    Science.gov (United States)

    Bigirimana, Vincent de P; Hua, Gia K H; Nyamangyoku, Obedi I; Höfte, Monica

    2015-01-01

    Around one century ago, a rice disease characterized mainly by rotting of sheaths was reported in Taiwan. The causal agent was identified as Acrocylindrium oryzae, later known as Sarocladium oryzae. Since then it has become clear that various other organisms can cause similar disease symptoms, including Fusarium sp. and fluorescent pseudomonads. These organisms have in common that they produce a range of phytotoxins that induce necrosis in plants. The same agents also cause grain discoloration, chaffiness, and sterility and are all seed-transmitted. Rice sheath rot disease symptoms are found in all rice-growing areas of the world. The disease is now getting momentum and is considered as an important emerging rice production threat. The disease can lead to variable yield losses, which can be as high as 85%. This review aims at improving our understanding of the disease etiology of rice sheath rot and mainly deals with the three most reported rice sheath rot pathogens: S. oryzae, the Fusarium fujikuroi complex, and Pseudomonas fuscovaginae. Causal agents, pathogenicity determinants, interactions among the various pathogens, epidemiology, geographical distribution, and control options will be discussed.

  20. Molecular systematics of the cotton root rot pathogen, Phymatotrichopsis omnivora

    NARCIS (Netherlands)

    Marek, S.M.; Hansen, K.; Romanish, M.; Thorn, R.G.

    2009-01-01

    Cotton root rot is an important soilborne disease of cotton and numerous dicot plants in the south-western United States and Mexico. The causal organism, Phymatotrichopsis omnivora (= Phymatotrichum omnivorum), is known only as an asexual, holoanamorphic (mitosporic) fungus, and produces conidia res

  1. Susceptibility of highbush blueberry cultivars to Phytophthora root rot

    Science.gov (United States)

    Phytophthora cinnamomi Rands is a ubiquitous soilborne pathogen associated with root rot in many woody perennial plant species, including highbush blueberry (Vaccinium sp.). To identify genotypes with resistance to the pathogen, cultivars and advanced selections of highbush blueberry were grown in a...

  2. Botanicals to Control Soft Rot Bacteria of Potato

    Directory of Open Access Journals (Sweden)

    M. M. Rahman

    2012-01-01

    Full Text Available Extracts from eleven different plant species such as jute (Corchorus capsularis L., cheerota (Swertia chiraita Ham., chatim (Alstonia scholaris L., mander (Erythrina variegata, bael (Aegle marmelos L., marigold (Tagetes erecta, onion (Allium cepa, garlic (Allium sativum L., neem (Azadiracta indica, lime (Citrus aurantifolia, and turmeric (Curcuma longa L. were tested for antibacterial activity against potato soft rot bacteria, E. carotovora subsp. carotovora (Ecc P-138, under in vitro and storage conditions. Previously, Ecc P-138 was identified as the most aggressive soft rot bacterium in Bangladeshi potatoes. Of the 11 different plant extracts, only extracts from dried jute leaves and cheerota significantly inhibited growth of Ecc P-138 in vitro. Finally, both plant extracts were tested to control the soft rot disease of potato tuber under storage conditions. In a 22-week storage condition, the treated potatoes were significantly more protected against the soft rot infection than those of untreated samples in terms of infection rate and weight loss. The jute leaf extracts showed more pronounced inhibitory effects on Ecc-138 growth both in in vitro and storage experiments.

  3. Phytophthora root rot resistance in soybean E00003

    Science.gov (United States)

    Phytophthora root rot (PRR), caused by the oomycete Phytophthora sojae, is a devastating disease in soybean production. Using resistant cultivars has been suggested as the best solution for disease management. Michigan elite soybean E00003 is resistant to P. sojae and has been used as a PRR resist...

  4. Detecting cotton boll rot with an electronic nose

    Science.gov (United States)

    South Carolina Boll Rot is an emerging disease of cotton, Gossypium hirsutum L., caused by the opportunistic bacteria, Pantoea agglomerans (Ewing and Fife). Unlike typical fungal diseases, bolls infected with P. agglomerans continue to appear normal externally, complicating early and rapid detectio...

  5. Root rot of sugarbeet in the Vojvodina Province

    Directory of Open Access Journals (Sweden)

    Stojšin Vera B.

    2006-01-01

    Full Text Available Large changes introduced in the sugar beet production technology in the Vojvodina Province over last 40 years resulted in changes in the etiology and harmfulness of different agents of sugar beet root diseases. Improvements in cultivation practices reduced the harmfulness of some diseases while increased the harmfulness of others. Some disease agents became obsolete, but others gained importance. New agents of root diseases were found. The most frequent damages, persisting over long periods of time were caused by seedling damping-off, Fusarium root rot, charcoal root rot, parasitic (Rhizomania and non-parasitic root bearding. The parasitic damping-off caused by several fungal species but most frequently by Phoma betae occurred at the time when multigerm seeds were used in combination with extensive cultural practices. The agents of seedling diseases completely lost their significance as the consequence of switching to fungicide - treated monogerm seeds, earlier planting and improved soil tillage. In the period of intensive use of agricultural chemicals, seedling damping-off occurred frequently due to the phytotoxic action of chemicals (insecticides, herbicides and mineral fertilizers. In some years, frosts caused damping- off of sugar beet seedlings on a large scale in the Vojvodina Province. Poor sugar beet germination and emergence were frequently due to spring droughts. Sometimes they were due to strong winds. The occurrence of Fusarium root rot and charcoal root rot intensified on poor soils. Fusariosis symptoms were exhibited as plant wilting and different forms of root rot. In recent years root tip rot has occurred frequently in the first part of the growing season causing necrosis and dying of plants. Lateral roots tended to proliferate from the healthy tissue, giving the root a bearded appearance similar to Rhizomania. Fusarium oxysporum was the most frequent agent of this fusariosis. F. graminearum, F. equiseti, F. solani have also been

  6. Sporoderm infrastructural and cytochemical modifications in cytoplasmic male sterile broad-bean (Vicia faba L.

    Directory of Open Access Journals (Sweden)

    Jean-Claude Audran

    2014-01-01

    Full Text Available A comparative study of mature sporoderms of sterile and fertile pollen grains was performed using electron microscopic techniques. In sterile pollen grains, intine is lacking; ectexine sculpture is reduced and tectum is overlaid by membranous systems. Infratectal texture is compact and a sporopollenin granulous mass is obturing the aperture central region. Endexine reacts with proteins and acidic carbohydrates tests.

  7. Java EE 7 development with NetBeans 8

    CERN Document Server

    Heffelfinger, David R

    2015-01-01

    The book is aimed at Java developers who wish to develop Java EE applications while taking advantage of NetBeans functionality to automate repetitive tasks. Familiarity with NetBeans or Java EE is not assumed.

  8. Development of a new diagnostic marker for growth habit selection in faba bean (Vicia faba L.) breeding.

    Science.gov (United States)

    Avila, C M; Atienza, S G; Moreno, M T; Torres, A M

    2007-11-01

    Faba bean varieties with determinacy of the apical meristem are relevant to green production. A diagnostic CAPS (cleavage amplification polymorphic sequence) marker for determinate growth habit (ti) in faba bean was previously developed by Avila et al. (Mol Breed 17:185-190, 2006) but was effective only on a limited range of cultivars or genotypes. In this study, we studied the reasons for this limited application and developed a new marker useful for most faba bean-breeding programs. By designing a new set of primers, the complete genomic Vf_TFL1 sequences from different genotypes contrasting for the character were obtained and additional base changes associated with the ti phenotype were identified. The comparison among faba bean sequences showed that the previous CAPS marker was based on a SNP (single nucleotide polymorphism) at position 469 in the intron 2-3, a silent mutation. On the contrary, a SNP at position 26 that distinguishes determinate and indeterminate growth habit genotypes lead to an amino acid change (Leu-9 to Arg) in the determinate growth habit genotypes that could account for the ti phenotype. A dCAPS marker based on this SNP that creates a TaqI site in the ti allele was developed. The marker was 100% successful in predicting ti phenotypes in a broad range of faba bean germplasm representing all major cultivars historically grown in Europe. The outcome confirms the utility of the new dCAPS in worldwide marker-assisted selection programs.

  9. Effect of cooking methods on selected physicochemical and nutritional properties of barlotto bean, chickpea, faba bean, and white kidney bean.

    Science.gov (United States)

    Güzel, Demet; Sayar, Sedat

    2012-02-01

    The effects of atmospheric pressure cooking (APC) and high-pressure cooking (HPC) on the physicochemical and nutritional properties of barlotto bean, chickpea, faba bean, and white kidney bean were investigated. The hardness of the legumes cooked by APC or HPC were not statistically different (P > 0.05). APC resulted in higher percentage of seed coat splits than HPC. Both cooking methods decreased Hunter "L" value significantly (P < 0.05). The "a" and "b" values of dark-colored seeds decreased after cooking, while these values tended to increase for the light-colored seeds. The total amounts of solid lost from legume seeds were higher after HPC compared with APC. Rapidly digestible starch (RDS) percentages increased considerably after both cooking methods. High pressure cooked legumes resulted in higher levels of resistant starch (RS) but lower levels of slowly digestible starch (SDS) than the atmospheric pressure cooked legumes.

  10. Blanching of green bean (Phaseolus vulgaris).

    Science.gov (United States)

    Kaack, K

    1994-12-01

    Experiments with one and two steps blanching of green beans have been carried out. Inactivation of the peroxydase requires more heating than inactivation of the enzymes which gives rise to off flavour from aldehydes. When blanching for about one minute to inactivate lipoxygenase, aldehyde formation of flavour ceases. The content of vitamin C decreases during blanching according to a first order reaction. Since considerable loss of vitamin C occurs during blanching, the treatment time should be reduced to a minimum. During preblanching at 65-75 degrees C and final blanching, chlorophyll is degraded to pheophytin and the surface colour expressed by the Hunter-values (-a/b) increases with time which means that the colour of the beans changes from green to yellow. The firmness of beans, which was measured by use of a tenderometer, decreases during blanching according to a first order reaction with 40 kcal/mole activation energy. Preblanching at 65-75 degrees C increases the firmness of the beans linearly with treatment time. This increase in firmness is stable after final blanching at 95 degrees C and even after thawing of frozen beans.

  11. Mycolytic enzymes produced by Streptomyces violaceusniger and their role in antagonism towards wood-rotting fungi.

    Science.gov (United States)

    Nagpure, Anand; Choudhary, Bharti; Gupta, Rajinder K

    2014-05-01

    Extracellular mycolytic enzymes produced under submerged fermentation by the fungal antagonist Streptomyces violaceusniger MTCC 3959 were characterized. This streptomycete produced higher amounts of extracellular chitinase and protease during late exponential phase, whereas β-1,3-glucanase production was at peak in mid-stationary phase. Cell-free culture filtrate (CCF) exhibited a broad range of antifungal activity against both white rot and brown rot fungi. The inhibitory activity was completely lost after treatment with proteinase K and heat, indicating that extracellular antifungal metabolites are heat labile and proteinaceous in nature. Optimum pH and temperature for enzyme activity were: 9.0 and 60 °C for chitinase; 6.0 and 60 °C for β-1,3-glucanase; and 9.0 and 70 °C for protease. Mycolytic enzymes were moderately thermostable, and had a wide pH stability range extending from pH 5.0 to 10.0. The zymogram analysis of CCF revealed five chitinase isoenzymes with an apparent molecular weight of 20.8, 33.3, 45.6, 67.4, and 114.8 kDa, one β-1,3-glucanase appeared as a single band of ∼131.8 kDa and four protease isoenzymes with approximate molecular weights of 22.8, 62.52, 74.64, and 120.5 kDa. S. violaceusniger MTCC 3959 produced mycolytic enzymes that can be effectively used for suppression of phytopathogenic basidiomycetes. It has the potential to be an effective biofungicide.

  12. Outbreaks of Chrysodeixis includens (Walker (Lepidoptera: Noctuidae in common bean and castor bean in São Paulo State, Brazil

    Directory of Open Access Journals (Sweden)

    Edson Luiz Lopes Baldin

    2014-12-01

    Full Text Available Since 2009, increasing populations of Chrysodeixis includens (Walker (Lepidoptera: Noctuidae have been observed in cultivated common bean (Phaseolus vulgaris L. and castor bean (Ricinus communis L. at the Lageado Experimental Farm, belonging to the FCA/UNESP, Botucatu, São Paulo State, Brazil. Defoliations around 80% and 50% were observed in the common bean cv. Pérola and castor bean cv. IAC-2028, respectively. Samples of individuals (caterpillars and pupae were collected in the field, and kept in laboratory until adult emergence aiming to confirm the species. These are new observations for common bean in São Paulo State and, in the case of castor bean, unpublished in Brazil. It suggests that C. includens has adapted to attack other agricultural crops, demanding attention of common bean and castor bean producers.

  13. Effect of hydrocolloids on functional properties of navy bean starch

    Science.gov (United States)

    The effects of hydrocolloid replacement on the pasting properties of navy bean starch and on the properties of navy bean starch gels were studied. Navy bean starch was isolated, and blends were prepared with beta-glucan, guar gum, pectin and xanthan gum solutions. The total solids concentration was ...

  14. Effects of fermented soya bean on digestion, absorption and diarrhoea

    NARCIS (Netherlands)

    Kiers, J.L.

    2001-01-01

    For many centuries Asian people have consumed soya beans in various forms of traditional fermented soya bean foods. Major desirable aspects of fermented soya bean foods are their attractive flavour and texture, certain nutritional properties, and possible health promoting effects. This study describ

  15. 9 CFR 319.301 - Chili con carne with beans.

    Science.gov (United States)

    2010-01-01

    ... 9 Animals and Animal Products 2 2010-01-01 2010-01-01 false Chili con carne with beans. 319.301 Section 319.301 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE... Dehydrated Meat Food Products § 319.301 Chili con carne with beans. Chili con carne with beans shall...

  16. 7 CFR 457.150 - Dry bean crop insurance provisions.

    Science.gov (United States)

    2010-01-01

    ...; (f) Earthquake; (g) Volcanic eruption; or (h) Failure of the irrigation water supply, if caused by an..., or that could be received, for contract seed beans under a seed bean processor contract if the... total production under contract with the seed company. Beans—Dry beans and contract seed...

  17. New bean seeds and the struggle for their dissemination

    NARCIS (Netherlands)

    Almekinders, C.J.M.; Aguilar, E.; Herrera, R.

    2007-01-01

    The northern region of Nicaragua has always been an important bean and maize producing area. But a widespread presence of the Golden Mosaic Virus made it impossible to grow beans in the last years. A Participatory Plant Breeding programme started in 1999, aiming to develop new bean varieties that wo

  18. Evaluation of the reaction oof interspecific hybrids of common bean and tepary bean to Bradyrhizobium y Rhizobium

    Science.gov (United States)

    Interspecific hybrids between common bean, Phaseolus vulgaris L., and tepary bean, Phaseolus acutifolius A. Gray, have the potential to increase bean production in regions where rainfall is limited. In 2014, an experiment was initiated using a split-plot design. The treatments included inoculation, ...

  19. 76 FR 16700 - Importation of French Beans and Runner Beans From the Republic of Kenya Into the United States

    Science.gov (United States)

    2011-03-25

    ... individual beans. We would require the beans to be inspected by the Kenyan NPPO and found to be free of..., primarily to the European Union (EU). The EU provides a well-established market and it is unlikely that there would be a large diversion of French bean exports by Kenya from this market to the United...

  20. Application of scan line filling to leaf image segmentation of sugarcane red rot disease

    Science.gov (United States)

    Zhao, Jinhui; Liu, Muhua; Yao, Mingyin

    2009-07-01

    Red rot disease is a common disease at the seedling stage of sugarcane. In order to identify red rot disease effectively, a segmentation algorithm for leaf images of sugarcane red rot disease using scan line filling is proposed. The proposed algorithm has six stages. During the first stage, the class of green plants is separated from the class of non-green plants using the color feature of 2G-R-B. At the second stage, connected regions of the class of green plants are labeled. At the third stage, outer contours are extracted. At the fourth stage, the regions surrounded by outer contours are filled using scan line filling. At the fifth stage, the images are colorized. At the sixth stage, red rot diseased spots are extracted using the color feature. The experimental results show that this algorithm can extract red rot diseased spots effectively, and the accurate rate of image segmentation for red rot diseases is 96%.

  1. Pengaruh Penambahan Jamur Pelapuk Putih (White Rot Fungi pada Proses Pengomposan Tandan Kosong Kelapa Sawit

    Directory of Open Access Journals (Sweden)

    Nasrul Nasrul

    2010-12-01

    Full Text Available Composting is nowadays a general treatment method for agriculture waste such as empty fruit bunch. This research article reported the composting process of the empty fruit bunches. The effect of addition of white rot fungi (Phanerochaete Chrysosporium as an activator on composting product was studied. Experiment results indicated that white rot fungi is a good activator to improve degradation process of the empty fruit bunch become an organic fertilizer. White rot fungi has capable to increase composting period become shorter in compare with original composting without addition of white rot fungi. The organic fertilizer product as regulation issued by the Standar Nasional Indonesia (NSI can be achieved in duration of 3 months, while for original process without addition of white rot fungi longer degradation time is necessary. Keyword: Composting, empty fruit bunch, white rot fungi

  2. Broad-spectrum antiviral agents

    Directory of Open Access Journals (Sweden)

    Jun-Da eZhu

    2015-05-01

    Full Text Available Development of highly effective, broad-spectrum antiviral agents is the major objective shared by the fields of virology and pharmaceutics. Antiviral drug development has focused on targeting viral entry and replication, as well as modulating cellular defense system. High throughput screening of molecules, genetic engineering of peptides, and functional screening of agents have identified promising candidates for development of optimal broad-spectrum antiviral agents to intervene in viral infection and control viral epidemics. This review discusses current knowledge, prospective applications, opportunities, and challenges in the development of broad-spectrum antiviral agents.

  3. Cellulose Degradation by Cellulose-Clearing and Non-Cellulose-Clearing Brown-Rot Fungi

    OpenAIRE

    Highley, Terry L.

    1980-01-01

    Cellulose degradation by four cellulose-clearing brown-rot fungi in the Coniophoraceae—Coniophora prasinoides, C. puteana, Leucogyrophana arizonica, and L. olivascens—is compared with that of a non-cellulose-clearing brown-rot fungus, Poria placenta. The cellulose- and the non-cellulose-clearing brown-rot fungi apparently employ similar mechanisms to depolymerize cellulose; most likely a nonenzymatic mechanism is involved.

  4. Rice Sheath Rot: An Emerging Ubiquitous Destructive Disease Complex

    OpenAIRE

    Vincent de Paul Bigirimana; Khuong Hoang Gia Hua; Obedi Ishibwela Nyamangyoku; Monica eHöfte

    2015-01-01

    Around one century ago, a rice disease characterized mainly by rotting of sheaths was reported in Taiwan. The causal agent was identified as Acrocylindrium oryzae, later known as Sarocladium oryzae. Since then it has become clear that various other organisms can cause similar disease symptoms, including Fusarium spp. and fluorescent pseudomonads. These organisms have in common that they produce a range of phytotoxins that induce necrosis in plants. The same agents also cause grain discolorati...

  5. Environmental Factors and Bioremediation of Xenobiotics Using White Rot Fungi

    OpenAIRE

    Magan, Naresh; Fragoeiro, Silvia; Bastos, Catarina

    2010-01-01

    This review provides background information on the importance of bioremediation approaches. It describes the roles of fungi, specifically white rot fungi, and their extracellular enzymes, laccases, ligninases, and peroxidises, in the degradation of xenobiotic compounds such as single and mixtures of pesticides. We discuss the importance of abiotic factors such as water potential, temperature, and pH stress when considering an environmental screening approach, and examples are provided of the ...

  6. Complete genome sequence of bean leaf crumple virus, a novel begomovirus infecting common bean in Colombia.

    Science.gov (United States)

    Carvajal-Yepes, Monica; Zambrano, Leidy; Bueno, Juan M; Raatz, Bodo; Cuellar, Wilmer J

    2017-02-10

    A copy of the complete genome of a novel bipartite begomovirus infecting common bean (Phaseolus vulgaris L.) in Colombia was obtained by rolling-circle amplification (RCA), cloned, and sequenced. The virus is associated with leaf crumple symptoms and significant yield losses in Andean and Mesoamerican beans. Such symptoms have been reported increasingly in Colombia since at least 2002, and we detected the virus in leaf material collected since 2008. Sequence analysis showed that the virus is a member of a distinct species, sharing 81% and 76% nucleotide (nt) sequence identity (in DNA-A and DNA-B, respectively) to other begomoviruses infecting common bean in the Americas. The data obtained support the taxonomic status of this virus (putatively named 'bean leaf crumple virus', BLCrV) as a member of a novel species in the genus Begomovirus.

  7. Broad resonances in transport theory

    CERN Document Server

    Leupold, S

    2003-01-01

    The extension of the transport theoretical framework to include states with a broad mass distribution is discussed. The proper life-time and cross sections for a state with an arbitrarily given invariant mass is discussed in detail. (author)

  8. The First Report of Postharvest Stem Rot of Kohlrabi Caused by Sclerotinia sclerotiorum in Korea.

    Science.gov (United States)

    Kim, Joon-Young; Aktaruzzaman, Md; Afroz, Tania; Hahm, Young-Il; Kim, Byung-Sup

    2014-12-01

    In March 2014, a kohlrabi stem rot sample was collected from the cold storage room of Daegwallyong Horticultural Cooperative, Korea. White and fuzzy mycelial growth was observed on the stem, symptomatic of stem rot disease. The pathogen was isolated from the infected stem and cultured on potato dextrose agar for further fungal morphological observation and to confirm its pathogenicity, according to Koch's postulates. Morphological data, pathogenicity test results, and rDNA sequences of internal transcribed spacer regions (ITS 1 and 4) showed that the postharvest stem rot of kohlrabi was caused by Sclerotinia sclerotiorum. This is the first report of postharvest stem rot of kohlrabi in Korea.

  9. Castor bean response to zinc fertilization

    Energy Technology Data Exchange (ETDEWEB)

    Chaves, Lucia Helena Garofalo; Cunha, Tassio Henrique Cavalcanti da Silva; Lima, Vinicius Mota; Cabral, Paulo Cesar Pinto; Barros Junior, Genival; Lacerda, Rogerio Dantas de [Universidade Federal de Campina Grande (UAEAg/UFCG), PB (Brazil). Unidade Academica de Engenharia Agricola

    2008-07-01

    Zinc is a trace element and it is absolutely essential for the normal healthy growth of plants. This element plays a part of several enzyme systems and other metabolic functions in the plants. Castor beans (Ricinus communis L.) crop is raising attention as an alternative crop for oil and biodiesel production. Despite the mineral fertilization is an important factor for increasing castor beans yield, few researches has been made on this issue, mainly on the use of zinc. In order to evaluate the effects of zinc on growth of this plant an experiment was carried out in a greenhouse, in Campina Grande, Paraiba State, Brazil, from July to December 2007. The substrate for the pot plants was a 6 mm-sieved surface soil (Neossolo Quartzarenico). The experimental design was a completely randomized with three replications. The treatments were composed of five levels of Zn (0; 2; 4; 6 and 8 mg dm{sup -3}), which were applied at the time of planting. One plant of castor bean, cultivar BRS 188 - Paraguacu, was grown per pot after thinning and was irrigated whenever necessary. Data on plant height, number and length of leaves and stem diameter were measured at 21, 34, 77 and 103 days after planting. Under conditions that the experiment was carried out the results showed that the Zn levels used, did not affect the castor bean plants growth. (author)

  10. Synthesis of a jojoba bean disaccharide.

    Science.gov (United States)

    Kornienko, A; Marnera, G; d'Alarcao, M

    1998-08-01

    A synthesis of the disaccharide recently isolated from jojoba beans, 2-O-alpha-D-galactopyranosyl-D-chiro-inositol, has been achieved. The suitably protected chiro-inositol unit was prepared by an enantiospecific synthesis from L-xylose utilizing SmI2-mediated pinacol coupling as a key step.

  11. Phenotyping common beans for adaptation to drought

    Directory of Open Access Journals (Sweden)

    Stephen eBeebe

    2013-03-01

    Full Text Available Common beans (Phaseolus vulgaris L. originated in the New World and are the grain legume of greatest production for direct human consumption. Common bean production is subject to frequent droughts in highland Mexico, in the Pacific coast of Central America, in northeast Brazil, and in eastern and southern Africa from Ethiopia to South Africa. This article reviews efforts to improve common bean for drought tolerance, referring to genetic diversity for drought response, the physiology of of drought tolerance mechanisms, and breeding strategies. Different races of common bean respond differently to drought, with race Durango of highland Mexico being a major source of genes. Sister species of P. vulgaris likewise have unique traits, especially P. acutifolius which is well adapted to dryland conditions. Diverse sources of tolerance may have different mechanisms of plant response, implying the need for different methods of phenotyping to recognize the relevant traits. Practical considerations of field management are discussed including: trial planning; water management; and field preparation.

  12. Seed coat darkening in Cowpea bean

    Science.gov (United States)

    Seed coat of cowpea bean (Vigna unguiculata L. Walp) slowly browns to a darker color during storage. High temperature and humidity during storage might contribute to this color change. Variation in browning rate among seeds in a lot leads to a mixture of seed colors creating an unacceptable product...

  13. Common bean and cowpea improvement in Angola

    Science.gov (United States)

    During 2014 and 2015, the Instituto de Investigação Agronómica (IIA) evaluated the performance of common bean (Phaselolus vulgaris L.) breeding lines and improved cowpea (Vigna unguiculata L. Walp.) varieties. The field experiments were planted in the lowlands at Mazozo and in the highlands at Chian...

  14. Zinc supplementation, production and quality of coffee beans

    Directory of Open Access Journals (Sweden)

    Herminia Emilia Prieto Martinez

    2013-04-01

    Full Text Available Besides its importance in the coffee tree nutrition, there is almost no information relating zinc nutrition and bean quality. This work evaluated the effect of zinc on the coffee yield and bean quality. The experiment was conducted with Coffea arabica L. in "Zona da Mata" region, Minas Gerais, Brazil. Twelve plots were established at random with 4 competitive plants each. Treatments included plants supplemented with zinc (eight plots and control without zinc supplementation (four plots. Plants were subjected to two treatments: zinc supplementation and control. Yield, number of defective beans, beans attacked by berry borers, bean size, cup quality, beans zinc concentration, potassium leaching, electrical conductivity, color index, total tritable acidity, pH, chlorogenic acids contents and ferric-reducing antioxidant activity of beans were evaluated. Zinc positively affected quality of coffee beans, which presented lower percentage of medium and small beans, lower berry borer incidence, lower potassium leaching and electrical conductivity, higher contents of zinc and chlorogenic acids and higher antioxidant activity in comparison with control beans.

  15. THE EFFECT OF WATER EXTRACTS FROM WINTER SAVORY ON BLACK BEAN APHID MORTALITY

    Directory of Open Access Journals (Sweden)

    Milena Rusin

    2016-01-01

    Full Text Available The aim of this study was to determine the effect of water extracts prepared from fresh and dry matter of winter savory (Satureja montana L. on mortality of wingless females and larvae of black bean aphid (Aphis fabae Scop.. The experiment was conducted in the laboratory, in six replicates. Dry extracts were prepared at concentration of 2%, 5% and 10%, while the fresh plant at concentration of 10%, 20% and 30%. Stomach poisoning of extracts was determined by soaking broad bean leaves in the respective solutions, and then determining mortality of wingless female and larvae feeding on leaves thus prepared at 12 hour intervals. The results of the experiment showed that the extract prepared from dry matter at the highest concentration (10%, as well as the extracts from fresh matter at concentration of 20% and 30% contributed to an increase in mortality of wingless female of black bean aphid. Meanwhile, extracts prepared from both dry and fresh matter at two highest concentrations caused an increase in mortality of larvae of this pest. Furthermore, with increasing concentrations of analysed extracts prepared from both fresh and dry matter of winter savory, their negative effect on wingless females and larvae usually increase.

  16. Methylxanthine and catechin content of fresh and fermented cocoa beans, dried cocoa beans, and cocoa liquor

    Directory of Open Access Journals (Sweden)

    Pedro P. Peláez

    2016-01-01

    Full Text Available The theobromine and catechin content can affect the quality of cocoa liquor and is influenced by cacao variety, production area (PA, and fermentation, as well as the method of drying beans (FDB and cocoa liquor production (CLP. This study examined variationsin methylxanthine and catechin levels in fresh and fermented cocoa beans, dried cocoa grains, and in cocoa liquor from Trinitario, Criollo, and Forastero cacao varieties. A total of 123 cocoa bean samples from three Peruvian PAs at different altitudes, Tingo María (TM, San Alejandro (SA, and Curimana (CU, were evaluated. The theobromine (Tb and caffeine (Cf contents in fresh cocoa beans were affected by both cocoa type and PA. The caffeine content was higher in Trinitario cacao than in Criollo and Forastero varieties (p ≤ 0.05. The Tb and CF contents decreased in dry cocoa grain and was affected by FDB (p ≤ 0.05 (1.449 ± 0.004 to 1.140 ± 0.010 and 0.410 ± 0.03 to 0.165 ± 0.02 g Tb and C, respectively, per 100 g dry weight. Cocoa beans from Tingo María, which has thehighest altitude, had higher Tb and CF contents than those from other PAs. The catechin (C and epicatechin (EC contents were affected by the FDB and CLP, and were highestin fresh cocoa beans from the Tingo María area (range: 0.065 ± 0.01 to 0.020 ± 0.00 g C/100 g. The C and EC contents decreased during FDB and CLP (0.001 g C/100 g of cocoa liquor. Taken together, these results show that higher concentrations of Tb, Cf, C,and EC are present in fresh cocoa beans. Moreover, the cocoa variety influenced cocoa liquor quality. Overall, cocoa from the Tingo María PA had the most desirable chemical composition.

  17. Potassium and Phosphorus effects on disease severity of charcoal rot of soybean

    Science.gov (United States)

    The effects of potassium (K) and phosphorus (P) fertilizers on charcoal rot of soybean [Glycine max (L.) Merr.] are unknown. Therefore, the severity of charcoal rot was studied at five levels of K (0, 37, 75, 111 and 149 kg K ha-1) and a level that was equal to the recommended fertilizer applicatio...

  18. Development of dry gram-negative bacteria biocontrol products and small pilot tests against dry rot

    Science.gov (United States)

    Pseudomonas fluorescens strains S11:P:12, P22:Y:05, and S22:T:04 suppress four important storage potato maladies; dry rot, late blight, pink rot, and sprouting. Studies were designed to identify methods for producing a dried, efficacious biological control product. The strains were evaluated individ...

  19. Control of speck rot in apple fruit caused by Phacidiopycnis washingtonensis with pre- and postharvest fungicides

    Science.gov (United States)

    Speck rot caused by Phacidiopycnis washingtonensis is a recently reported postharvest fruit rot disease of apple. Infection of apple fruit by the fungus occurs in the orchard, but symptoms develop during storage. In this study, selected pre- and postharvest fungicides were evaluated for control of s...

  20. First report of Fusarium hostae causing crown rot of wheat (Triticum spp.) in Turkey

    Science.gov (United States)

    Crown rot disease of wheat is caused by a complex of Fusarium species. To identify species associated with crown rot in Turkey, crowns and stems of bread wheat (Triticum aestivum L.) and durum wheat (T. durum Desf.) were collected from the Central and Southeast Anatolia, Black Sea, Aegean, Mediterr...

  1. Studies on the epidemiology of spear rot in oil palm (Elaeis guineensis Jacq.) in Suriname.

    NARCIS (Netherlands)

    Lande, van de H.L.

    1993-01-01

    The epidemiology of spear rot, an infectious disease of unknown etiology, was studied over 10 years at three government-owned oil palm plantations in Suriname. As with other and similar diseases, amarelecimento fatal in Brazil and pudrición del cogollo in Latin America, which too show rot and yellow

  2. Preharvest applications of fungicides for control of Sphaeropsis rot in stored apples

    Science.gov (United States)

    Sphaeropsis rot caused by Sphaeropsis pyriputrescens is a recently reported postharvest fruit rot disease of apple in Washington State and causes significant economic losses. Infection of apple fruit by the fungus occurs in the orchard, but decay symptoms develop during storage or in the market. The...

  3. Vine kill interval and temperature effects on Fusarium dry rot development in Russet Burbank

    Science.gov (United States)

    Fusarium dry rot disease development in potato storage is universal to all market sectors and regions. The objective of this 2-year study was to evaluate three possible management decisions that may impact Fusarium dry rot development in storage: a) vine kill to harvest time, b) harvested tuber pulp...

  4. First Report of Calonectria hongkongensis Causing Fruit Rot of Rambutan (Nephelium lappaceum)

    NARCIS (Netherlands)

    Serrato-Diaz, L.M.; Latoni-Brailowsky, E.I.; Rivera-Vargas, L.I.; Goenaga, R.J.; Crous, P.W.; French-Monar, R.D.

    2013-01-01

    Fruit rot of rambutan is a pre- and post-harvest disease problem of rambutan orchards. In 2011, fruit rot was observed at USDA-ARS orchards in Mayaguez, Puerto Rico. Infected fruit were collected and 1 mm2 tissue sections were surface disinfested with 70% ethanol followed by 0.5% sodium hypochlorite

  5. The presence and survival of soft rot (Erwinia) in flower bulb production systems

    NARCIS (Netherlands)

    Doorn, van J.; Vreeburg, P.J.M.; Leeuwen, van P.J.; Dees, R.H.L.

    2011-01-01

    Soft rot is causing increasing damage in the flower bulb industry. Bulbous ornamentals such as Hyacinthus, Dahlia, Iris, Muscari, Freesia and Zantedeschia can be infected. Soft rot in flower bulbs is mainly caused by Dickeya spp. (Dickeya spp.) and Erwinia carotovora subsp. carotovora (Pectobacteriu

  6. Efficacy of management tools for control of Pythium root rot of Douglas fir seedlings, 2010

    Science.gov (United States)

    This study investigated the efficacy of management tools for control of Pythium root rot of Douglas fir seedlings. This effort was conducted as part of the IR-4 Ornamental Horticulture program to evaluate fungicides and biopesticides for management of root, crown and stem rot of ornamental plants ca...

  7. BIO-DEINKING OF ONP AND ITS EFFLUENT TREATMENT BY WHITE ROT FUNGUS

    Institute of Scientific and Technical Information of China (English)

    Lu Lin; Chunsheng Pang; Deqing Zhao; Liping Jiang

    2004-01-01

    Deinking of secondary fiber of ONP and effluent treatment with white rot fungus were studied in this paper. Results showed that white rot fungus exerted significant effect on deinking of ONP and CODcr decrease and degradation of pollutants of deinking effluent.

  8. Optimization of manganese peroxidase production by the white rot fungus Bjerkandera sp. strain BOS55.

    NARCIS (Netherlands)

    Mester, T.; Field, J.A.

    1997-01-01

    Manganese dependent peroxidase (MnP) is the most ubiquitous peroxidase produced by white rot fungi. MnP is known to be involved in lignin degradation, biobleaching and in the oxidation of hazardous organopollutants. Bjerkandera sp. strain BOS55 is a nitrogen-unregulated white rot fungus which produc

  9. Leaf Spot and Stem Rot on Wilford Swallowwort Caused by Stemphylium lycopersici in Korea.

    Science.gov (United States)

    Hong, Sung Kee; Choi, Hyo Won; Lee, Young Kee; Shim, Hong Sik; Lee, Sang Yeob

    2012-12-01

    In June 2012, leaf spot and stem rot were observed on Wilford Swallowwort plants grown in Cheonan, Korea. Three fungal isolates obtained from the diseased leaves and stems were identified as Stemphylium lycopersici, based on morphological, cultural, and molecular characteristics and pathogenicity. This is the first report of leaf spot and stem rot on Wilford Swallowwort caused by S. lycopersici.

  10. Postharvest salicylic acid treatment reduces storage rots in water-stressed but no unstressed sugarbeet roots

    Science.gov (United States)

    Exogenous application of salicylic acid (SA) reduces storage rots in a number of postharvest crops. SA’s ability to protect sugarbeet (Beta vulgaris L.) taproots from common storage rot pathogens, however, is unknown. To determine the potential of SA to reduce storage losses caused by three common...

  11. Interaction of Rhizoctonia solani and Rhizopus stolonifer Causing Root Rot of Sugar Beet

    Science.gov (United States)

    In recent years, growers in Michigan and other sugar beet production areas of the United States have reported increasing incidence of root rot with little or no crown or foliar symptoms in sugar beet with Rhizoctonia crown and root rot. In addition, Rhizoctonia-resistant beets have been reported wit...

  12. Infection of apple fruit by Sphaeropsis pyriputrescens in the orchard in relation to Sphaeropsis rot in storage

    Science.gov (United States)

    Sphaeropsis rot, caused by Sphaeropsis pyriputrescens, is a recently recognized postharvest fruit rot disease of apple in the United States. The objectives of this study were to determine the timing of apple fruit infection in the orchard in relation to development of Sphaeropsis rot in storage and ...

  13. The Broad Autism Phenotype Questionnaire

    Science.gov (United States)

    Hurley, Robert S. E.; Losh, Molly; Parlier, Morgan; Reznick, J. Steven; Piven, Joseph

    2007-01-01

    The broad autism phenotype (BAP) is a set of personality and language characteristics that reflect the phenotypic expression of the genetic liability to autism, in non-autistic relatives of autistic individuals. These characteristics are milder but qualitatively similar to the defining features of autism. A new instrument designed to measure the…

  14. Ion beam analysis of ground coffee and roasted coffee beans

    Science.gov (United States)

    Debastiani, R.; dos Santos, C. E. I.; Yoneama, M. L.; Amaral, L.; Dias, J. F.

    2014-01-01

    The way that coffee is prepared (using roasted ground coffee or roasted coffee beans) may influence the quality of beverage. Therefore, the aim of this work is to use ion beam techniques to perform a full elemental analysis of packed roasted ground coffee and packed roasted coffee beans, as well as green coffee beans. The samples were analyzed by PIXE (particle-induced X-ray emission). Light elements were measured through RBS (Rutherford backscattering spectrometry) experiments. Micro-PIXE experiments were carried out in order to check the elemental distribution in the roasted and green coffee beans. In general, the elements found in ground coffee were Mg, P, S, Cl, K, Ca, Ti, Mn, Fe, Cu, Zn, Rb and Sr. A comparison between ground coffee and grinded roasted beans shows significant differences for several elements. Elemental maps reveal that P and K are correlated and practically homogeneously distributed over the beans.

  15. Safety assessment of the biogenic amines in fermented soya beans and fermented bean curd.

    Science.gov (United States)

    Yang, Juan; Ding, Xiaowen; Qin, Yingrui; Zeng, Yitao

    2014-08-06

    To evaluate the safety of biogenic amines, high performance liquid chromatography (HPLC) was used to evaluate the levels of biogenic amines in fermented soya beans and fermented bean curd. In fermented soya beans, the total biogenic amines content was in a relatively safe range in many samples, although the concentration of histamine, tyramine, and β-phenethylamine was high enough in some samples to cause a possible safety threat, and 8 of the 30 samples were deemed unsafe. In fermented bean curd, the total biogenic amines content was more than 900 mg/kg in 19 white sufu amples, a level that has been determined to pose a safety hazard; putrescine was the only one detected in all samples and also had the highest concentration, which made samples a safety hazard; the content of tryptamine, β-phenethylamine, tyramine, and histamine had reached the level of threat to human health in some white and green sufu samples, and that may imply another potential safety risk; and 25 of the 33 samples were unsafe. In conclusion, the content of biogenic amines in all fermented soya bean products should be studied and appropriate limits determined to ensure the safety of eating these foods.

  16. Dynamics of Cocoa Bean Pulp Degradation during Cocoa Bean Fermentation: Effects of Yeast Starter Culture Addition

    Directory of Open Access Journals (Sweden)

    Laras Cempaka

    2014-07-01

    Full Text Available Fermentation is a crucial step in the post-harvest processing of cocoa beans. This process comprises mixed culture microbial activities on the cocoa bean pulp, producing metabolites that act as important precursors for cocoa flavour development. Variations in the microbial population dynamics during the fermentation process may induce changes in the overall process. Thus, the introduction of a specific microbial starter culture may improve the quality of the fermentation. This article discusses the effects ofthe addition of Saccharomyces cerevisae var. Chevalieri starter culture on cocoa bean fermentation. The dynamics in the yeast concentration, sugary pulp compounds and metabolic products were measured during fermentation. The alterations in the dynamic metabolite profile were significant, although only a slight difference was observed in the yeast population. A higher fermentation index was measured for the cocoa bean fermentation with yeast starter culture, 1.13 compared to 0.84. In conclusion, this method can potentially be applied to shorten the cocoa bean fermentation time.

  17. Are white-rot fungi a real biotechnological option for the improvement of environmental health?

    Science.gov (United States)

    Tortella, G; Durán, N; Rubilar, O; Parada, M; Diez, M C

    2015-06-01

    The use of white-rot fungi as a biotechnological tool for cleaning the environment of recalcitrant pollutants has been under evaluation for several years. However, it is still not possible to find sufficiently detailed investigations of this subject to conclude that these fungi can decontaminate the environment. In the present review, we have summarized and discussed evidence about the potential of white-rot fungi to degrade such pollutants as polycyclic aromatic hydrocarbons, dyes or antibiotics as an example of the complex structures that these microorganisms can attack. This review also discusses field experiment results and limitations of white-rot fungi trials from contaminated sites. Moreover, the use of catabolic potential of white-rot fungi in biopurification systems (biobeds) is also discussed. The current status and future perspectives of white-rot fungi, as a viable biotechnological alternative for improvement of environmental health are noted.

  18. Genomic surveys and expression analysis of bZIP gene family in castor bean (Ricinus communis L.).

    Science.gov (United States)

    Jin, Zhengwei; Xu, Wei; Liu, Aizhong

    2014-02-01

    The basic leucine zipper (bZIP) transcription factors comprise a family of transcriptional regulators present extensively in plants, involved in regulating diverse biological processes such as flower and vascular development, seed maturation, stress signaling and pathogen defense. Castor bean (Ricinus communis L. Euphorbiaceae) is one of the most important non-edible oilseed crops and its seed oil is broadly used for industrial applications. We performed a comprehensive genome-wide identification and analysis of the bZIP transcription factors that exist in the castor bean genome in this study. In total, 49 RcbZIP transcription factors were identified, characterized and categorized into 11 groups (I-XI) based on their gene structure, DNA-binding sites, conserved motifs, and phylogenetic relationships. The dimerization properties of 49 RcbZIP proteins were predicted on the basis of the characteristic features in the leucine zipper. Global expression profiles of 49 RcbZIP genes among different tissues were examined using high-throughput sequencing of digital gene expression profiles, and resulted in diverse expression patterns that may provide basic information to further reveal the function of the 49 RcbZIP genes in castor bean. The results obtained from this study would provide valuable information in understanding the molecular basis of the RcbZIP transcription factor family and their potential function in regulating the growth and development, particularly in seed filling of castor bean.

  19. Biochemical characterization and transcriptional analysis of the epoxide hydrolase from white-rot fungus Phanerochaete chrysosporium

    Institute of Scientific and Technical Information of China (English)

    Nian Li; Yizheng Zhang; Hong Feng

    2009-01-01

    The white-rot basidiomycetes Phanerochaete chrysosporium is a model fungus used to investigate the sec-ondary metabolism and lignin degradation. Genomic sequencing reveals the presence of at least 18 genes encoding putative epoxide hydrolases (EHs). One cDNA encoding EH (designated as PchEHA) was cloned and expressed in Escherichia coli. Transcriptional analysis demonstrated that the transcripts of PchEHA could be detected under the ligninolytic and nonligninolytic con-ditions as well as amended with anthracene. The recom-binant enzyme exhibits broad hydrolytic activity toward several racemic epoxides including styrene oxide, epichlorohydrin, and 1,2-epoxybutane, but with different specificity. Using racemic styrene oxide as the substrate, the optimal pH and temperature are pH 9.0 and 40℃, respectively. The enzyme is not sensitive to EDTA, and is inhibited by H2O2, and several metal ions including Zn2+, Cd2+, and Hg2+ at various extents. Several organic cosoivents including acetone, dimethylsulfoxide, formamide, glycerol and ethanol at 10% (v/v) cause slight or no inhibition of the hydrolytic reaction. More importantly, the recombinant enzyme displays distinct enantioselective preference to several chiral epoxides. The enzyme showed good enantioselec-tivity toward chiral styrene oxide with preferential hydrolysis of (R)-enantiomer. PchEHA is likely a novel soluble EH based on the sequence analysis and catalytic properties, and is a great potential biocatalyst for the preparation of enantiopure styrene oxide in racemic kinetic resolution.

  20. Bacteriophages of Soft Rot Enterobacteriaceae-a minireview.

    Science.gov (United States)

    Czajkowski, Robert

    2016-01-01

    Soft rot Enterobacteriaceae (Pectobacterium spp. and Dickeya spp., formerly pectinolytic Erwinia spp.) are ubiquitous necrotrophic bacterial pathogens that infect a large number of different plant species worldwide, including economically important crops. Despite the fact that these bacteria have been studied for more than 50 years, little is known of their corresponding predators: bacteriophages, both lytic and lysogenic. The aim of this minireview is to critically summarize recent ecological, biological and molecular research on bacteriophages infecting Pectobacterium spp. and Dickeya spp. with the main focus on current and future perspectives in that field.

  1. Chemical and Sensorial Evaluation of a Newly Developed Bean Jam

    OpenAIRE

    Guiné, Raquel; Figueiredo, Ana; Correia, Paula; Gonçalves, Fernando

    2015-01-01

    The purpose of the present work was to develop an innovative food product with nutritional properties as well as appealing organoleptic qualities. The product, a jam, was prepared with the beans’ cooking water combined with fresh apple or carrot, without the addition of any conservatives. Three different jams were produced: bean and carrot, bean and apple and bean, apple and cinnamon. The developed products underwent a sensorial...

  2. Bean grain hysteresis with induced mechanical damage

    Directory of Open Access Journals (Sweden)

    Renata C. Campos

    Full Text Available ABSTRACT This study aimed to evaluate the effect of mechanical damage on the hysteresis of beans with induced mechanical damage under different conditions of temperature and relative humidity. Beans (Phaseolus vulgaris L. harvested manually with 35% water content (w.b. were used. Part of this product was subjected to induced mechanical damage by Stein Breakage Tester and controlled drying (damaged and control sample, for sorption processes. The sorption isotherms of water were analyzed for different temperature conditions: 20, 30, 40 and 50 oC; and relative humidity: 0.3; 0.4; 0.5; 0.7 and 0.9 (decimal. Equilibrium moisture content data were correlated with six mathematical models, and the Modified Oswin model was the one that best fitted to the experimental data. According to the above mentioned isotherms, it was possible to observe the phenomenon of hysteresis of damaged and control samples, and this phenomenon was more pronounced in control ones.

  3. Enzyme production by wood-rot and soft-rot fungi cultivated on corn fiber followed by simultaneous saccharification and fermentation.

    Science.gov (United States)

    Shrestha, Prachand; Khanal, Samir K; Pometto, Anthony L; van Leeuwen, J Hans

    2009-05-27

    This research aims at developing a biorefinery platform to convert lignocellulosic corn fiber into fermentable sugars at a moderate temperature (37 °C) with minimal use of chemicals. White-rot (Phanerochaete chrysosporium), brown-rot (Gloeophyllum trabeum), and soft-rot (Trichoderma reesei) fungi were used for in situ enzyme production to hydrolyze cellulosic and hemicellulosic components of corn fiber into fermentable sugars. Solid-substrate fermentation of corn fiber by either white- or brown-rot fungi followed by simultaneous saccharification and fermentation (SSF) with coculture of Saccharomyces cerevisiae has shown a possibility of enhancing wood rot saccharification of corn fiber for ethanol fermentation. The laboratory-scale fungal saccharification and fermentation process incorporated in situ cellulolytic enzyme induction, which enhanced overall enzymatic hydrolysis of hemi/cellulose components of corn fiber into simple sugars (mono-, di-, and trisaccharides). The yeast fermentation of the hydrolyzate yielded 7.8, 8.6, and 4.9 g ethanol per 100 g corn fiber when saccharified with the white-, brown-, and soft-rot fungi, respectively. The highest ethanol yield (8.6 g ethanol per 100 g initial corn fiber) is equivalent to 35% of the theoretical ethanol yield from starch and cellulose in corn fiber. This research has significant commercial potential to increase net ethanol production per bushel of corn through the utilization of corn fiber. There is also a great research opportunity to evaluate the remaining biomass residue (enriched with fungal protein) as animal feed.

  4. Nutritional characteristics of biofortified common beans

    Directory of Open Access Journals (Sweden)

    Priscila Brigide

    2014-09-01

    Full Text Available Iron and zinc deficiency can cause anemia and alterations in the immune response and impair work capacity. To minimize this problem, biofortification has been developed to improve and/or maintain the nutritional status of the population. Beans are an important source of carbohydrates, proteins, and minerals. The objective of this study is to characterize biofortified beans, quantify the minerals in different cultivars, and determine mineral dialysis. Grains of raw and cooked beans were analyzed for moisture, protein, lipids, fiber, minerals, and in vitro availability using four treatments and one control. The data were analyzed using ANOVA, and the Tukey test (p<0.05. The chemical composition of the raw and cooked treatments showed a moisture content ranging from 13.4 to 81.4%, protein from 22.24 to 31.59%, lipids from 1.66 to 2.22%, fiber from 16.81 to 40.63%, carbohydrates from 27.80 to 34.78%, and ash from 4.1 to 4.82%. Different varieties of beans showed statistically significant differences in iron and zinc content compared to the control cultivar (Pérola. The iron content differed significantly from that of the Pérola cultivar in the raw treatment, while in the cooked treatment, the control cultivar did not differ from the Piratã. The same behavior was observed for the zinc content in both treatments. There was no significant difference between the cultivars in the treatments in terms of the content of the dialysis of Calcium (Ca, Iron (Fe, Magnesium (Mg, and Zinc (Zn.

  5. Pb-210 in beans grown in normal background environments

    Energy Technology Data Exchange (ETDEWEB)

    Mingote, Raquel M.; Nogueira, Regina A., E-mail: mingote@cnen.gov.br, E-mail: rnogueira@cnen.gov.br [Centro Regional de Ciencias Nucleares do Centro-Oeste (CRCN-CO/CNEN-GO), Abadia de Goias, GO (Brazil)

    2013-07-01

    A survey was carried out on the activity concentration of {sup 210}Pb in common beans (Phaseolus vulgaris L.) grown in normal background environments in Brazil. The Carioca beans and the black type were analyzed, which contribute with 90% of the Brazilian market share of the common beans. To this study 18 bean samples sowing in the Middle-Western and Southern regions of Brazil during the years 2010-2011 were analyzed. The proportion per bean type was similar to the national production: most of the Carioca beans (n=13; 72%) and black beans (n=5; 28%). Other 17 values of {sup 210}Pb activity concentration in beans grown in Southeastern region available in the GEORAD, a dataset of radioactivity in Brazil, were added to the statistic analysis of the data. Considering the information contained in censored observations (60%), representative value of {sup 210}Pb activity concentration in beans was estimated by using robust ROS, a censored data analysis method. The value 0.047 Bq kg{sup -1} fresh wt. obtained here is according to {sup 210}Pb activity concentration in grains reported by UNSCEAR 0.05 Bq kg{sup -1}. (author)

  6. The Effective Design of Bean Bag as a Vibroimpact Damper

    Directory of Open Access Journals (Sweden)

    A.Q. Liu

    2000-01-01

    Full Text Available The technique of a bean bag damper has been effectively applied in many engineering fields to control the vibroimpact of a structural system. In this study, the basic parameters responsible for the design of an effective bean bag: the size of beans, the mass ratio of the bean bag to the structure to which it is attached, the clearance distance and the position of the bag, are studied by both theoretical and experimental analyses. These will provide a better understanding of the performance of the bean bag for optimisation of damper design. It was found that reducing the size of beans would increase the exchange of momentum in the system due to the increase in the effective contact areas. Within the range of mass ratios studied, the damping performance of the damper was found to improve with higher mass ratios. There was an optimum clearance for any specific damper whereby the maximum attenuation could be achieved. The position of the bag with respect to nodes and antipodes of the primary structure determined the magnitude of attenuation attainable. Furthermore, the limitations of bean bags have been identified and a general criteria for the design of a bean bag damper has been formulated based on the study undertaken. It was shown that an appropriately configured bean bag damper was capable of reducing the amplitude of vibration by 80% to 90%.

  7. Yam bean oleoresin and seed quality of common bean infested by Acanthoscelides obtectus Say.

    OpenAIRE

    Rangel-Lucio, José Antonio; Juárez-Goiz, José Mayolo; García-Moya, Edmundo; Fernández-Andrés, María Dolores; Rodríguez-Hernández, Cesáreo; Alvarado-Bárcenas, Estéfana

    2011-01-01

    The objective of this investigation was to evaluate the effect of yam bean oleoresin on common bean seed quality and bean weevil control. The oleoresin extract was obtained by the HPLC technique, the presence of rotenone was detected(15 mg/l). Three concentrations of oleoresin extract were tested (Ci, g/ml): C1 (5x10-7, 5x10-6, …5x10-2); C2 (1x10-2, 2x10-2,…6x10-2); C3 (5x10-1, 6x10-1,…9x10-1) and one control treatment per concentration, applied to recipients of 300 ml with 50 g of common bea...

  8. Heterobasidion annosum root rot in Picea abies: Variability in aggressiveness and resistance

    Energy Technology Data Exchange (ETDEWEB)

    Swedjemark, G.

    1995-12-31

    In greenhouse experiments 3-4 year-old plants of Picea abies and Pinus sylvestris were inoculated with the root rot fungus Heterobasidion annosum. The growth rates of 25 S and 14 P isolates of the fungus were measured in the sapwood of about 25 rametes each of 98 Norway spruce clones and in 150 seedlings each of Norway spruce and Scots pine. Correlations were determined between fungal sapwood growth and a variety of variables, i.e. the physical stage, growth rhythm, size and condition of the cuttings, provenance and the growth capacity of the clones estimated in field tests. Genetic parameters such as phenotypic and genotypic variance, genotypic coefficient of variance and broad sense heritability were calculated. H. annosum infection incidence was close to 100 % for inoculated Norway spruce clones, and the mortality rate was about 1 %. Fungal growth in sapwood differed significantly among clones and among fungal isolates. The genotypic correlation coefficient was large (30 %) and broad sense heritability was 0.35. This suggests that good selection progress can be achieved in breeding programs. The physical stage (bud-flush, vegetative and post bud-set stage) of the clones contributed significantly to the total variation in fungal growth. The population structure of H. annosum was studied in two 25-year-old, first generation stands of Norway spruce. The stands had been thinned one and seven years earlier, respectively. All stumps and remaining trees were sampled for H. annosum isolates. The isolates were tested with somatic incompatibility to detect single genets and the distribution of genets in the stand was determined. About 70 % of the 7-year-old thinning stumps were colonized by H, annosum, and 50 % of these stumps were colonized by more than one fungal genet. Sixty-three percent of the remaining trees were infected with H. annosum but among them there was only one genet per tree. 104 refs, 12 figs

  9. Populational survey of arthropods on transgenic common bean expressing the rep gene from Bean golden mosaic virus

    OpenAIRE

    Pinheiro, Patrícia V; Quintela, Eliane D; Ana Maria R. Junqueira; Aragão, Francisco JL; Faria, Josias C

    2014-01-01

    Genetically modified (GM) crops is considered the fastest adopted crop technology in the history of modern agriculture. However, possible undesirable and unintended effects must be considered during the research steps toward development of a commercial product. In this report we evaluated effects of a common bean virus resistant line on arthropod populations, considered as non-target organisms. This GM bean line (named M1/4) was modified for resistance against Bean golden mosaic virus (BGMV) ...

  10. Broad Diphotons from Narrow States

    CERN Document Server

    An, Haipeng; Zhang, Yue

    2015-01-01

    ATLAS and CMS have each reported a modest diphoton excess consistent with the decay of a broad resonance at ~ 750 GeV. We show how this signal can arise in a weakly coupled theory comprised solely of narrow width particles. In particular, if the decaying particle is produced off-shell, then the associated diphoton resonance will have a broad, adjustable width. We present simplified models which explain the diphoton excess through the three-body decay of a scalar or fermion. Our minimal ultraviolet completion is a weakly coupled and renormalizable theory of a singlet scalar plus a heavy vector-like quark and lepton. The smoking gun of this mechanism is an asymmetric diphoton peak recoiling against missing transverse energy, jets, or leptons.

  11. Impact of Long Dry Season on Bean Characteristics of Robusta Coffee (Coffea canephora

    Directory of Open Access Journals (Sweden)

    Ucu Sumirat

    2008-07-01

    Full Text Available Bean characteristics in Robusta coffee (Coffea canephora should be taken into considerations in coffee breeding. Beside genetic factor, environment has been known as an important factor in the formation and change of composition of bean characteristics. This research aimed to find out the effect of long dry season on changes of bean characteristics. The population observed consisted of 277 genotypes originated from reciprocal crossings of three parental namely BP 409, BP 961 and Q 121. Observation was conducted in Kaliwining Experimental Garden of ICCRI in Jember, East Java during two years with different drought intensity i.e. 2005—2006 and 2006—2007 production years. The result showed that long dry season decreased the range value of population of normal beans, pea beans and triage beans, and followed by decreasing in the mean value except for normal beans. Long dry season also influence the change of value range of empty bean to higher proportion, and followed by increasing in the mean value. Distribution pattern of normal beans tend in to remain at high proportion, in contrast to those of pea and triage beans. In other side, long dry season tended to change distribution pattern of empty beans to at high proportion. Correlation analysis among beans characteristics showed that normal beans had negative correlations with pea beans and empty beans. Pea beans had a positive correlation with empty beans. Long dry season decreased proportion of pea bean and triage bean, in contrast to those of empty beans. Increasing proportion of empty bean was caused by failure of growth to normal bean under stress condition. Key words : Coffee canephora, bean characteristics, long dry season, variation, correlation, composition.

  12. Pretreatment of African yam bean (Sphenostylis stenocarpa): effect of soaking and blanching on the quality of African yam bean seed.

    Science.gov (United States)

    Aminigo, Ebiokpo R; Metzger, Lloyd E

    2005-12-01

    The effect of pretreatment (soaking in sodium salts and blanching) on hydration coefficient (HC), chemical composition, texture, and color of African yam bean (AYB) was investigated. Soaking in water and in salt solutions increased the HC and about 90% of final HC values were attained at 12 and 4 hr of soaking for whole and dehulled beans, respectively. Protein content was slightly increased by soaking and blanching while ash and fat contents were reduced. Generally, a combination of dehulling and wet-processing reduced firmness of the beans more than soaking or blanching of the whole beans. Antioxidant activity was lowest (3260 TE(3)100 g) in cream-colored beans and highest (16,600 TE/100 g) in brown-colored beans. The tannin contents of unprocessed cream-colored beans and dehulled wet-processed marble variety were not significantly different (p > 0.05). The levels of tannins in the marble variety were reduced by blanching for 40 min (19.2%), soaking for 12 hr (16.0%), dehulling (72.0%), dehulling and blanching (88.8%). The whiteness of bean flours was increased significantly by dehulling, slightly by wet-processing of marble variety, and reduced significantly by wet-processing of cream-colored beans.

  13. Peaches tree genetic divergence for brown rot reaction

    Directory of Open Access Journals (Sweden)

    Américo Wagner Júnior

    2011-10-01

    Full Text Available It was evaluated the genetic divergence in peach genotypes for brown rot reaction. It was evaluated 26 and 29 peach genotypes in the 2009/2010 and 2010/2011 production cycle, respectively. The experiment was carried out at the Laboratório de Fitossanidade, da UTFPR - Campus Dois Vizinhos. The experimental design was entirely randomized, considering each peach genotype a treatment, and it was use three replication of nine fruits. The treatment control use three replication of three peach. The fruit epidermis were inoculated individually with 0.15 mL of M. fructicola conidial suspension (1.0 x 10(5 spores mL-1. In the control treatment was sprayed with 0.15 mL of distilled water. The fruits were examined 72 and 120 hours after inoculation, and the incidence and severity disease were evaluated. These results allowed realized study for genetic divergence, used as dissimilarity measure the Generalized Mahalanobis distance. Cluster analysis using Tocher´s optimization method and distances in the plan were applied. There was smallest genetic divergence among peach trees evaluated for brown rot, what can difficult to obtain resistance in the genotypes.

  14. The effect of lactic acid bacteria on cocoa bean fermentation.

    Science.gov (United States)

    Ho, Van Thi Thuy; Zhao, Jian; Fleet, Graham

    2015-07-16

    Cocoa beans (Theobroma cacao L.) are the raw material for chocolate production. Fermentation of cocoa pulp by microorganisms is crucial for developing chocolate flavor precursors. Yeasts conduct an alcoholic fermentation within the bean pulp that is essential for the production of good quality beans, giving typical chocolate characters. However, the roles of bacteria such as lactic acid bacteria and acetic acid bacteria in contributing to the quality of cocoa bean and chocolate are not fully understood. Using controlled laboratory fermentations, this study investigated the contribution of lactic acid bacteria to cocoa bean fermentation. Cocoa beans were fermented under conditions where the growth of lactic acid bacteria was restricted by the use of nisin and lysozyme. The resultant microbial ecology, chemistry and chocolate quality of beans from these fermentations were compared with those of indigenous (control) fermentations. The yeasts Hanseniaspora guilliermondii, Pichia kudriavzevii, Kluyveromyces marxianus and Saccharomyces cerevisiae, the lactic acid bacteria Lactobacillus plantarum, Lactobacillus pentosus and Lactobacillus fermentum and the acetic acid bacteria Acetobacter pasteurianus and Gluconobacter frateurii were the major species found in control fermentations. In fermentations with the presence of nisin and lysozyme, the same species of yeasts and acetic acid bacteria grew but the growth of lactic acid bacteria was prevented or restricted. These beans underwent characteristic alcoholic fermentation where the utilization of sugars and the production of ethanol, organic acids and volatile compounds in the bean pulp and nibs were similar for beans fermented in the presence of lactic acid bacteria. Lactic acid was produced during both fermentations but more so when lactic acid bacteria grew. Beans fermented in the presence or absence of lactic acid bacteria were fully fermented, had similar shell weights and gave acceptable chocolates with no differences

  15. Citrus Black Rot is Caused by Phylogenetically Distinct Lineages of Alternaria alternata.

    Science.gov (United States)

    Peever, T L; Carpenter-Boggs, L; Timmer, L W; Carris, L M; Bhatia, A

    2005-05-01

    ABSTRACT Phylogenetic analysis revealed that isolates of Alternaria alternata causing black rot of citrus were associated with six well-supported evolutionary lineages. Isolates recovered from brown spot lesions on Minneola tangelo, leaf spot lesions on rough lemon, and healthy citrus tissue and noncitrus hosts were related closely to isolates from black-rotted fruit. Phylogenies estimated independently from DNA sequence data from an endopolygalacturonase gene (endoPG) and two anonymous regions of the genome (OPA1-3 and OPA2-1) had similar topologies, and phylogenetic analysis was performed on the combined data set. In the combined phylogeny, isolates from diverse ecological niches on citrus and noncitrus hosts were distributed in eight clades. Isolates from all lineages, regardless of ecological or host association, caused black rot in fruit inoculation assays, demonstrating that small-spored Alternaria isolates associated with different ecological niches on citrus and other plant hosts are potential black rot pathogens. These data also indicated that the fungi associated with black-rotted fruit do not form a natural evolutionary group distinct from other Alternaria pathogens and saprophytes associated with citrus. The use of the name A. citri to describe fungi associated with citrus black rot is not justified and it is proposed that citrus black rot fungi be referred to as A. alternata.

  16. Brown rot on nuts of Castanea sativa Mill: an emerging disease and its causal agent

    Directory of Open Access Journals (Sweden)

    Maresi G

    2013-07-01

    Full Text Available The quality and quantity of nut production are fundamental to the economic viability of chestnut cultivation, yet recent reports indicate that severe damage due to moulds represents a significant problem for growers. We carried out an investigation of the agents of chestnut rot and internal fruit damage in three orchards in Italy. Black and brown rot, as well as insect damage, were found in all the areas examined. Brown rot appeared to be the main cause of damage, affecting 8% to 49% and 2% to 24% of nuts collected from the ground and from burrs, respectively. With respect to morphology and DNA sequencing analyses, fungal isolates obtained from brown rot were homologous with Gnomoniopsis sp. obtained from Dryocosmus kuriphilus (Yasumatsu galls and with Gnomoniopsis castanea and Gnomoniopsis smithogilvyi described on chestnut in Italy and Australia, respectively. The same fungus was also isolated from the bark of one- and two-years-old healthy shoots at each site, supporting the endophytic behaviour of this rot agent. Brown rot symptoms on nuts associated with Gnomoniopsis sp. corresponded with those previously described by several authors and referred to as Phoma or Phomopsis endogena, suggesting a relationship between these fungi and Gnomoniopsis sp. It is to notice that the escalation of brown rot damage in Italy followed several periods of drought and probably the recent invasion of D. kuriphilus, both stress factors for chestnut trees.

  17. Evaluation of Genetic Diversity of Castor Bean for Biodiesel Utilization

    Science.gov (United States)

    Castor bean (Ricinus communis L., 2n=20) is a cross-pollinated diploid species belonging to the family Euphorbiaceae instead of the Leguminosae. It is a native of Africa but may have originated in India. Castor bean plants grow as annual or perennial, depending on geographical locations, climate a...

  18. Antioxidant activity of black bean (Phaseolus vulgaris L.) protein hydrolysates

    Science.gov (United States)

    The objective of this work was to study the effect of enzymatic hydrolysis of black bean protein concentrate using different enzymes. Bean proteins were extracted and hydrolyzed over a period of 120 min using the enzymes pepsin or alcalase. The protein hydrolysates’ molecular weight was assayed by e...

  19. Examining growth, yield and bean quality of Ethiopian coffee trees

    NARCIS (Netherlands)

    Bote, Adugna

    2016-01-01

    Coffee (Coffeaarabica L.)bean production and quality are determined by a diversity of interacting factors (e.g. shade, nitrogen, crop traits). Bean yield increases with increase in radiation, but adequate fertilizer suppliesare needed to sustain the productivity. This thesis analysed coffee tree gro

  20. Incentives for cocoa bean production in Ghana: Does quality matter?

    NARCIS (Netherlands)

    Quarmine, W.; Haagsma, R.; Sakyi-Dawson, O.; Asante, F.; Huis, van A.; Obeng-Ofori, D.

    2012-01-01

    This paper investigates the institutional factors that constrain farmers’ incentives to enhance the quality of cocoa beans in Ghana. Data were collected at three levels of aggregation in the cocoa bean value chain: village, district, and national level. Multi-stage cluster sampling was employed to s

  1. Variability for Biological Nitrogen Fixation Capacity in Beans

    Science.gov (United States)

    As legumes, common beans have the capacity to form a symbiotic relationship with soil bacteria called rhizobia and fix nitrogen from the atmosphere. Common beans however are considered to be poor nitrogen fixers as compared to other legumes. Identification of genetic variability for N fixation capac...

  2. The composition of wax and oil in green coffee beans

    NARCIS (Netherlands)

    Folstar, P.

    1976-01-01

    Methods for the isolation of wax and oil from green coffee beans were studied and a method for the quantitative extraction of coffee oil from the beans was introduced. Coffee wax, coffee oil and wax-free coffee oil as well as the unsaponifiable matter prepared from each were fractionated by column c

  3. IRON, ZINC, AND FERRITIN ACCUMULATION IN COMMON BEANS

    DEFF Research Database (Denmark)

    Urbanski, Dorian Fabian; Sørensen, Kirsten; Jurkiewicz, Anna Malgorzata

      that the distribution of iron is dependant on the genotype. Using immunolocalization, we visualized the localization of  ferritin in mature common bean seeds.   This knowledge can contribute to the discovery of factors that affect the bioavailability of micronutrients and  can contribute to breeding common beans...

  4. Releasing nitrogen from ammoniated lignin by white rot fungus cometabolizes environmental pollutants

    Institute of Scientific and Technical Information of China (English)

    LIN Lu; ZHAO De-qing; ZHOU Xian-tao; QIU Yu-gui; ZHANG Gan

    2003-01-01

    The nitrogen-modified lignocelluloses(NML) produced under oxic ammoniation was metabolized by white rot fungus, NH4+-N was released, NO3--N concentration was decreased and total nitrogen loss was blocked within incubation period. During releasing nitrogen from the metabolism of NML, white rot fungus cometabolized recalcitrant environmental pollutants and showed higher degradation capability. Results indicated that this NML complex colonized by white rot fungus might be effective with economic feasibility when they are applied into the vast field ecosystem, it might stabilize NH4+ nitrogen flux and bioremediate the polluted environmental sites.

  5. Variation in oxalate and oxalate decarboxylase production by six species of brown and white rot fungi

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Oliver, Jason; Howell, Caitlin;

    cell lumen where it quickly dissociates into hydrogen ions and oxalate, resulting in a pH decrease of the environment, and oxalate-cation complexes. Generally, brown rot fungi accumulate larger quantities of oxalic acid in the wood than white rot fungi. The amount of oxalic acid has been shown to vary...... of formic acid and CO2 (Makela et al., 2002). So far only a few species of brown rot fungi have been shown to accumulate this enzyme (Micales, 1995, Howell and Jellison, 2006).   The purpose of this study was to investigate the variation in the levels of soluble oxalate and total oxalate, in correlation...

  6. Occurrence and distribution of viruses infecting the bean in Serbia

    Directory of Open Access Journals (Sweden)

    Petrović Dragana

    2010-01-01

    Full Text Available This work describes the incidence and distribution of the most important bean viruses in Serbia: Bean common mosaic virus (BCMV, Bean common mosaic necrosis virus (BCMNV, Bean yellow mosaic virus (BYMV, Cucumber mosaic virus (CMV and Alfalfa mosaic virus (AMV. The viral isolates were characterized serologically and biologically. BCMV was found in the largest number of plants (30.53%, followed by BCMNV (2.67%, CMV (5.34%, and AMV (3.41%, since BYMV was not determined. Mixed viral infections were found in several samples. The RT-PCR method was used to prove that the tested isolates belong to the BCMV, family Potyviridae and strains Russian and NL-3 D. Results obtained in this work will enable further studies of the genetic variability of bean virus isolates from Serbia. .

  7. Broad-spectrum antiviral therapeutics.

    Directory of Open Access Journals (Sweden)

    Todd H Rider

    Full Text Available Currently there are relatively few antiviral therapeutics, and most which do exist are highly pathogen-specific or have other disadvantages. We have developed a new broad-spectrum antiviral approach, dubbed Double-stranded RNA (dsRNA Activated Caspase Oligomerizer (DRACO that selectively induces apoptosis in cells containing viral dsRNA, rapidly killing infected cells without harming uninfected cells. We have created DRACOs and shown that they are nontoxic in 11 mammalian cell types and effective against 15 different viruses, including dengue flavivirus, Amapari and Tacaribe arenaviruses, Guama bunyavirus, and H1N1 influenza. We have also demonstrated that DRACOs can rescue mice challenged with H1N1 influenza. DRACOs have the potential to be effective therapeutics or prophylactics for numerous clinical and priority viruses, due to the broad-spectrum sensitivity of the dsRNA detection domain, the potent activity of the apoptosis induction domain, and the novel direct linkage between the two which viruses have never encountered.

  8. SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis.

    Science.gov (United States)

    Valdisser, Paula Arielle M R; Pappas, Georgios J; de Menezes, Ivandilson P P; Müller, Bárbara S F; Pereira, Wendell J; Narciso, Marcelo G; Brondani, Claudio; Souza, Thiago L P O; Borba, Tereza C O; Vianello, Rosana P

    2016-06-01

    Researchers have made great advances into the development and application of genomic approaches for common beans, creating opportunities to driving more real and applicable strategies for sustainable management of the genetic resource towards plant breeding. This work provides useful polymorphic single-nucleotide polymorphisms (SNPs) for high-throughput common bean genotyping developed by RAD (restriction site-associated DNA) sequencing. The RAD tags were generated from DNA pooled from 12 common bean genotypes, including breeding lines of different gene pools and market classes. The aligned sequences identified 23,748 putative RAD-SNPs, of which 3357 were adequate for genotyping; 1032 RAD-SNPs with the highest ADT (assay design tool) score are presented in this article. The RAD-SNPs were structurally annotated in different coding (47.00 %) and non-coding (53.00 %) sequence components of genes. A subset of 384 RAD-SNPs with broad genome distribution was used to genotype a diverse panel of 95 common bean germplasms and revealed a successful amplification rate of 96.6 %, showing 73 % of polymorphic SNPs within the Andean group and 83 % in the Mesoamerican group. A slightly increased He (0.161, n = 21) value was estimated for the Andean gene pool, compared to the Mesoamerican group (0.156, n = 74). For the linkage disequilibrium (LD) analysis, from a group of 580 SNPs (289 RAD-SNPs and 291 BARC-SNPs) genotyped for the same set of genotypes, 70.2 % were in LD, decreasing to 0.10 %in the Andean group and 0.77 % in the Mesoamerican group. Haplotype patterns spanning 310 Mb of the genome (60 %) were characterized in samples from different origins. However, the haplotype frameworks were under-represented for the Andean (7.85 %) and Mesoamerican (5.55 %) gene pools separately. In conclusion, RAD sequencing allowed the discovery of hundreds of useful SNPs for broad genetic analysis of common bean germplasm. From now, this approach provides an excellent panel

  9. Laser-Induced Breakdown Spectroscopy (LIBS) for spectral characterization of regular coffee beans and luwak coffee bean

    Science.gov (United States)

    Nufiqurakhmah, Nufiqurakhmah; Nasution, Aulia; Suyanto, Hery

    2016-11-01

    Luwak (civet) coffee refers to a type of coffee, where the cherries have been priorly digested and then defecated by a civet (Paradoxurus Hermaphroditus), a catlike animals typically habited in Indonesia. Luwak will only selectively select ripe cherries, and digesting them by enzymatic fermentation in its digestive system. The defecated beans is then removed and cleaned from the feces. It is regarded as the world's most expensive coffee, Traditionally the quality of the coffee is subjectively determined by a tester. This research is motivated by the needs to study and develop quantitative parameters in determining the quality of coffee bean, which are more objective to measure the quality of coffee products. LIBS technique was used to identify the elemental contents of coffee beans based on its spectral characteristics in the range 200-900 nm. Samples of green beans from variant of arabica and robusta, either regular and luwak, were collected from 5 plantations in East Java. From the recorded spectra, intensity ratio of nitrogen (N), hydrogen (H), and oxygen (O) as essential elements in coffee is applied. In general, values extracted from luwak coffee bean is higher with increases 0.03% - 79.93%. A Discriminant Function Analysis (DFA) also applied to identify marker elements that characterize the regular and luwak beans. Elements of Ca, W, Sr, Mg, and H are the ones used to differentiate the regular and luwak beans from arabica variant, while Ca and W are the ones used to differentiate the regular and luwak beans of robusta variant.

  10. Sensory analysis of beans (Phaseolus vulgaris

    Directory of Open Access Journals (Sweden)

    Sanz-Calvo M.

    1999-01-01

    Full Text Available The methodology of sensory profiling constitutes the basis of a descriptive quantitative analysis, defining a product with the minimum number of words and with maximum efficiency, using a precise tasting sheet, which can be reproduced and is understood by all. In this work, the texture profiling for different bean varieties that are characteristic of the Spanish market was carried out. Optimum conditions for samples and a tasting card were established, and a panel was trained. The texture profile results show significant differences amongst varieties and even amongst different origins for the same variety.

  11. Proteomic analysis of common bean (Phaseolus vulgaris) by two-dimensional gel electrophoresis and mass spectrometry

    Science.gov (United States)

    The modern cultivated common bean (Phaseolus vulgaris) has evolved from wild common beans distributed in Central America, Mexico and the Andean region of South America. It has been reported that wild common bean accessions have higher levels of protein content than the domesticated dry bean cultiva...

  12. Registration of PR1146-138 yellow dry bean germplasm line

    Science.gov (United States)

    The yellow bean (Phaseolus vulgaris L.) is an important market class in Haiti. However, there have been no previous attempts to genetically improve this seed type for the Caribbean. Landrace varieties of yellow beans in Haiti are susceptible to Bean golden yellow mosaic virus (BGYMV) and bean common...

  13. Development of the yellow common bean germplasm PR1146-138

    Science.gov (United States)

    The yellow bean (Phaseolus vulgaris L.) is an important market class in Haiti. There have been, however, no previous attempts to genetically improve this seed type for the Caribbean. Landrace varieties of yellow beans in Haiti are susceptible to Bean golden yellow mosaic virus (BGYMV) and bean commo...

  14. Saturnispora bothae sp. nov., isolated from rotting wood.

    Science.gov (United States)

    Morais, Camila G; Lara, Carla A; Borelli, Beatriz M; Cadete, Raquel M; Moreira, Juliana D; Lachance, Marc-André; Rosa, Carlos A

    2016-10-01

    Two strains representing a novel species of the genus Saturnispora were isolated from rotting wood samples collected in an Atlantic Rainforest site in Brazil. Analyses of the sequences of the D1/D2 domains of the rRNA gene showed that this novel species belongs to a subclade in the Saturnispora clade formed by Saturnispora sanitii, Saturnispora sekii, Saturnispora silvae and Saturnisporasuwanaritii. The novel species differed in D1/D2 sequences by 60 or more nucleotide substitutions from these species. The strains produced asci with one to four hemispherical ascospores. A novel species named Saturnispora bothae sp. nov. is proposed to accommodate these isolates. The type strain is UFMG-CM-Y292T (=CBS 13484T). The MycoBank number is MB 817127.

  15. Comparison of ligninolytic activities of selected white-rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Waldner, R.; Leisola, M.S.A.; Fiechter, A.

    1988-10-01

    Six fast growing ligninolytic white-rot fungi were compared with Phanerochaete chrysosporium. The results showed that the fungi have similar ligninolytic systems, although minor differences exist. Like in P. chrysosporium the ligninolytic system could be induced by veratryl alcohol in Coriolus versicolor and Chrysosporium pruinosum. These three lignin peroxidase producing fungi were the fastest lignin degraders in stationary cultures, whereas in agitated cultures Bjerkandera adusta showed highest lignin degradation rates. Metabolites accumulating during the degradation of veratryl alcohol were analyzed and compared. Peroxidase production seems to be a common feature of all the tested fungi. Polyclonal antibodies against the lignin peroxidase with pl of 4.65 from P. chrysosporium reacted with the extracellular peroxidases of C. pruinosum, C. versicolor and B. adusta, but not with those of Pleurotus ostreatus.

  16. Resistance to Fusarium dry root rot disease in cassava accessions

    Directory of Open Access Journals (Sweden)

    Saulo Alves Santos de Oliveira

    2013-10-01

    Full Text Available The objective of this work was to identify sources of resistance to dry root rot induced by Fusarium sp. in cassava accessions. A macroconidial suspension (20 µL of 11 Fusarium sp. isolates was inoculated in cassava roots, from 353 acessions plus seven commercial varieties. Ten days after inoculation, the total area colonized by the pathogen on the root pulp was evaluated by digital image analysis. Cluster analysis revealed the presence of five groups regarding resistance. The root lesion areas ranged from 18.28 to 1,096.07 mm² for the accessions BGM 1518 and BGM 556, respectively. The genotypes BGM 1042, BGM 1552, BGM 1586, BGM 1598, and BGM 1692 present the best agronomical traits.

  17. Synthetic dye decolorization capacity of white rot fungus Dichomitus squalens.

    Science.gov (United States)

    Eichlerová, Ivana; Homolka, Ladislav; Nerud, Frantisek

    2006-11-01

    The ability to decolorize eight chemically different synthetic dyes (Orange G, Amaranth, Orange I, Remazol Brilliant Blue R (RBBR), Cu-phthalocyanin, Poly R-478, Malachite Green and Crystal Violet) by the white rot fungus Dichomitus squalens was evaluated on agar plates. The fungus showed high decolorization capacity and was able to decolorize all dyes tested, but not to the same extent. Some of the dyes did not limit the decolorization capacity of the strain tested even at a concentration of 2g/l. The presence of the dyes in solid media reduced the mycelial growth rate of D. squalens; a positive correlation was found between the growth rate and the decolorization ability. Decolorization of Orange G and RBBR was studied also in liquid culture, where both dyes caused an enhancement of ligninolytic enzyme and overall hydrogen peroxide production and a decrease of biomass production. RBBR was removed to a higher extent than Orange G.

  18. Production of a biocontrol agent for crucifers black rot disease

    Directory of Open Access Journals (Sweden)

    C.L. Luna

    2002-04-01

    Full Text Available Of nine epiphytic isolates of the genus Bacillus, only B. subtilis R14, B. pumilus C116, B. megaterium pv. cerealis RAB7, and B. cereus C210 showed antibiotic activity when tested in vitro against the bacterium Xanthomonas campestris pv. campestris LFR-3. Aiming product a biocontrol agent for black rot in crucifers, the production of B. subtilis R14 was evaluated in a batch bioreactor. Rapid growth was observed in a medium containing molasses and yeast extract as C-source and N-source, respectively. During the exponential growth phase, the specific growth rate was 1.2 h-1. A quick sporulation was also observed in a C/N well-balanced medium. After the sporulation phase, maximum viable spore concentrations around 10(9 CFU/mL were obtained. Preliminary sedimentation tests at different pH values showed better biomass separation efficiencies at low pH values.

  19. Absorption and emission of silicon nanocrystals embedded in SiC: Eliminating Fabry-Pérot interference

    Energy Technology Data Exchange (ETDEWEB)

    Schnabel, M., E-mail: manuel.schnabel@ise.fraunhofer.de [Fraunhofer-Institute for Solar Energy Systems ISE, Heidenhofstr. 2, 79110 Freiburg (Germany); Department of Materials, University of Oxford, Parks Rd., Oxford OX1 3PH (United Kingdom); Summonte, C.; Canino, M. [Consiglio Nazionale delle Richerche—Istituto per e i Microsistemi, Via Gobetti 101, 40129 Bologna (Italy); Dyakov, S. A. [Department of Materials and Nano Physics, School of Information and Communication Technology, Royal Institute of Technology, Electrum 229, 16440 Kista (Sweden); López-Conesa, L. [MIND–IN2UB, Electronics Department, University of Barcelona, Martí i Franquès 1, E–08028 Barcelona (Spain); Löper, P.; Janz, S. [Fraunhofer-Institute for Solar Energy Systems ISE, Heidenhofstr. 2, 79110 Freiburg (Germany); Wilshaw, P. R. [Department of Materials, University of Oxford, Parks Rd., Oxford OX1 3PH (United Kingdom)

    2015-01-28

    Silicon nanocrystals embedded in SiC are studied by spectrophotometry and photoluminescence (PL) spectroscopy. Absorptivities are found to be affected by residual Fabry-Pérot interference arising from measurements of reflection and transmission at locations of different film thickness. Multiple computational and experimental methods to avoid these errors in thin film measurements, in general, are discussed. Corrected absorptivity depends on the quantity of Si embedded in the SiC but is independent of the Si crystallinity, indicating a relaxation of the k-conservation criterion for optical transitions in the nanocrystals. Tauc gaps of 1.8–2.0 and 2.12 eV are determined for Si nanoclusters and SiC, respectively. PL spectra exhibit a red-shift of ∼100 nm per nm nominal Si nanocluster diameter, which is in agreement with quantum confinement but revealed to be an artifact entirely due to Fabry-Pérot interference. Several simple experimental methods to diagnose or avoid interference in PL measurements are developed that are applicable to all thin films. Corrected PL is rather weak and invariant with passivation, indicating that non-paramagnetic defects are responsible for rapid non-radiative recombination. They are also responsible for the broad, sub-gap PL of the SiC, and can wholly account for the form of the PL of samples with Si nanoclusters. The PL intensity of samples with Si nanoclusters, however, can only be explained with an increased density of luminescent defects in the SiC due to Si nanoclusters, efficient tunneling of photogenerated carriers from Si nanoclusters to SiC defects, or with emission from a-Si nanoclusters. Films prepared on Si exhibit much weaker PL than the same films prepared on quartz substrates.

  20. Ghost imaging with broad distance

    Institute of Scientific and Technical Information of China (English)

    段德洋; 张路; 杜少将; 夏云杰

    2015-01-01

    We present a scheme that is able to achieve the ghost imaging with broad distance. The physical nature of our scheme is that the different wavelength beams are separated in free space by an optical media according to the slow light or dispersion principle. Meanwhile, the equality of the optical distance of the two light arms is not violated. The photon correlation is achieved by the rotating ground glass plate (RGGP) and spatial light modulator (SLM), respectively. Our work shows that a monochromic ghost image can be obtained in the case of RGGP. More importantly, the position (or distance) of the object can be ascertained by the color of the image. Thus, the imaging and ranging processes are combined as one process for the first time to the best of our knowledge. In the case of SLM, we can obtain a colored image regardless of where the object is.

  1. Fungi associated with post-harvest rot of black plum (Vitex doniana) in Nigeria.

    Science.gov (United States)

    Eseigbe, D A; Bankole, S A

    The fungi associated with rot of Vitex doniana fruits (blackplum) were isolated and identified. Aspergillus niger, Botryodiplodia theobromae, Candida spp. Penicillium chrysogenum, Rhizopus stolonifer, Fusarium pallidoroseum F. oxysporum and Mucor mucedo were the primary rot causing fungi in contrast to Cladosporium herbarum and Mucor circinelloides which were just present as secondary colonizers. The rot fungi penetrated mainly through wounds and bruises on the surface of fruits. Mature green fruits were less susceptible to infection than half ripe and fully ripened red fruits. Optimum rot by pathogenic isolates occurred at 25-30 degrees C and relative humidity 72.5-100%. The results of investigation of influence of storage temperatures and relative humidity on the quality of uninoculated healthy fruits are presented and discussed.

  2. Leuconostoc spp. Associated with Root Rot in Sugar Beet and Their Interaction with Rhizoctonia solani.

    Science.gov (United States)

    Strausbaugh, Carl A

    2016-05-01

    Rhizoctonia root and crown rot is an important disease problem in sugar beet caused by Rhizoctonia solani and also shown to be associated with Leuconostoc spp. Initial Leuconostoc studies were conducted with only a few isolates and the relationship of Leuconostoc with R. solani is poorly understood; therefore, a more thorough investigation was conducted. In total, 203 Leuconostoc isolates were collected from recently harvested sugar beet roots in southern Idaho and southeastern Oregon during 2010 and 2012: 88 and 85% Leuconostoc mesenteroides, 6 and 15% L. pseudomesenteroides, 2 and 0% L. kimchi, and 4 and 0% unrecognized Leuconostoc spp., respectively. Based on 16S ribosomal RNA sequencing, haplotype 11 (L. mesenteroides isolates) comprised 68 to 70% of the isolates in both years. In pathogenicity field studies with commercial sugar beet 'B-7', all Leuconostoc isolates caused more rot (P rot (P rot when both Leuconostoc spp. and R. solani are present in sugar beet roots.

  3. CHARACTERIZATION OF WOOD DECAY BY ROT FUNGI USING COLORIMETRY AND INFRARED SPECTROSCOPY

    Directory of Open Access Journals (Sweden)

    Mírian de Almeida Costa

    2011-09-01

    Full Text Available Wood samples of marupá (Simarouba amara and andiroba (Carapa guianenis were submitted to Trametes versicolor (white rot and Gloeophylum trabeum (brown rot fungi attack. Colorimetry was used to determine the color of the wood before and after wood decaying fungi. To evaluate the changes in chemical compounds levels in the wood samples, the diffuse reflectance medium infrared spectroscopy was used. Both wood were non resistant against white rot fungus, while with brown rot attack andiroba was resistant and marupá was not. After Gloeophyllum trabeum attack both woods changed to a darken color, and after Trametes versicolor attack andiroba changed to a lighter color and marupá darkened slightly, The analysis showed a reduction in the peak intensity of cellulose, hemicellulose and lignin, for both species, after Trametes versicolor attack and a reduction in the peak intensity of cellulose after Gloeophyllum trabeum attack.

  4. Field Efficiency Trial of 72% Streptomycin against Konjac Bacterial Soft Rot

    Institute of Scientific and Technical Information of China (English)

    Huang; Yongsheng; Li; Xiaojun; Zhu; Shijin; Ma; Yongsheng; Wang; Li

    2014-01-01

    72% Streptomycin soluble powder was used to control konjac bacterial soft rot in the study. The control efficiency and yield of different treatments were investigated,and the benefit was analyzed. The control scheme against konjac bacterial soft rot was as follows: spraying 72% atreptomycinon twice on rotation fields after all the seedlings were strong and uniform,or irrigating roots with 72% atreptomycinon once and spraying twice on continuous cropping fields.

  5. No Reported Species, Botrytis aclada Causing Gray Mold Neck Rot Disease on Onion Bulbs in Korea

    OpenAIRE

    Hwang, Sun–Kyoung; Lee, Seung–Yeol; Back, Chang–Gi; Kang, In–Kyu; Lee, Hyang–Burm; Jung, Hee-Young; Ohga, Shoji; Oga, Shoji

    2016-01-01

    Gray mold neck rot was observed on onion bulbs (Allium cepa L.) in low–temperature warehouses in Changnyeong–gun, Korea. The causative pathogen was isolated from rotted onion bulb lesions and identified as Botrytis aclada based on morphological and culture characteristics, the sequences of three nuclear genes (G3PDH, HSP60, and RPB2), and polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP) for Botrytis spp. identification. Although onion gray mold disease caused by B...

  6. First Report of Myrothecium roridum Causing Leaf and Stem Rot Disease on Peperomia quadrangularis in Korea.

    Science.gov (United States)

    Han, Kyung-Sook; Choi, Seung-Kook; Kim, Hyeong-Hwan; Lee, Sung-Chan; Park, Jong-Han; Cho, Myoung-Rae; Park, Mi-Jeong

    2014-06-01

    In 2010, symptoms of leaf and stem rot were observed on potted plants (Peperomia quadrangularis) in a greenhouse in Yongin, Korea. The causative pathogen was identified as Myrothecium roridum based on morphological data, internal transcribed spacer sequence analysis, and pathogenicity test. To our knowledge, this is the first report of M. roridum causing leaf and stem rot disease on P. quadrangularis in Korea and elsewhere worldwide.

  7. Distribution and prevalence of crown rot pathogens affecting wheat crops in southern Chile

    Directory of Open Access Journals (Sweden)

    Ernesto Moya-Elizondo

    2015-03-01

    Full Text Available Crown rot pathogens are associated with higher losses for wheat crop farmers, but information about the distribution and prevalence of these pathogens in Chile is inadequate. Distribution and prevalence of wheat (Triticum aestivum L. crown rot pathogens were examined in a survey of 48 commercial fields from December 2011 to February 2012 in southern Chile. These fields were located between Collipulli (37°56'00" S; 72°26'39" W and Purranque (40°50'30" S; 73°22'03" W. Severity of crown rot disease was determined through visual assessment of the first internode of 20 tillers obtained from each field. Incidence of crown rot pathogens per field was determined by plating the 20 tillers on Petri plates with 20% potato dextrose agar amended with lactic acid (aPDA medium. Resulting fungal colonies from monoxenic culture were identified by morphological or molecular-assisted identification. Severity of crown rot varied between 11.3% and 80% for individual fields. Culture plate analysis showed 72.2% of stems were infected with some fungus. Fusarium avenaceum, F. graminearum, and F. culmorum, pathogens associated with Fusarium crown rot disease were isolated from 13.5% of tillers. Gaeumannomyces graminis, causal agent of take-all disease in cereals, was isolated from 11.1% of culms. Phaeosphaeria sp., an endophyte and possibly a non-pathogenic fungus, was isolated from 13.9% of tillers. Pathogenic fungi such as Rhizoctonia spp. and Microdochium nivale, other saprophyte, and several unidentified non-sporulating fungi were isolated at frequencies lower than 3% of the total. Fusarium crown rot and take-all were the most prevalent and distributed crown rot diseases present in wheat crops in southern Chile.

  8. Relation between combustion heat and chemical wood composition during white and brown rot

    Energy Technology Data Exchange (ETDEWEB)

    Dobry, J.; Dziurzynski, A.; Rypacek, V.

    1986-01-01

    Samples of beech and spruce wood were incubated with the white rot fungi Pleurotus ostreatus and Lentinus tigrinus and the brown rot fungi Fomitopsis pinicola and Serpula lacrymans (S. lacrimans) for four months. Decomposition (expressed as percent weight loss) and amounts of holocellulose, lignin, humic acids (HU), hymatomelanic acids (HY) and fulvo acids (FU) were determined and expressed in weight percent. Combustion heat of holocellulose and lignin was determined in healthy wood and in specimens where decomposition was greater than 50%. During white rot decomposition, combustion heat was unchanged even at high decomposition and the relative amounts of holocellulose and lignin remained the same. Total amounts of HU, HY and FU increased during the initial stages and stabilized at 20%. The content of HU plus HY was negligible even at the highest degree of decomposition. During brown rot decomposition, combustion heat was unchanged only in the initial stages, it increased continously with increasing rot. Lignin content was unchanged in the initial stages and increased after 30% weight loss. Total amounts of HU, HY and FU increased continuously, reaching higher values than in white rot decomposition; there were differences between the two species. Biosynthesis of HU plus HY began when weight loss reached 30%; there were differences in absolute and relative amounts between species. 24 references.

  9. Root rot diseases of sugarbeet (Beta vulgaris L as affected by defloliation intensity

    Directory of Open Access Journals (Sweden)

    Karadimos Dimitros A.

    2006-01-01

    Full Text Available The aim of this work was to study the effect of sugar beet re-growth after water stress defoliation on root rots of three cultivars (Europa, Rival Corsica, which were spring sown in Thessaly, central Greece, for two growing seasons (2003-04. At the beginning of July, sugar beets were subjected to water deficit with irrigation withholding. A month later, three defoliation levels (control - C, moderate - MD, severe - SD and irrigation were applied. Thus, sugar beets were forced to re-grow and three harvests (15, 30 and 40 days after defoliation - DAD were conducted. Rotted roots per hectare were counted and pathogens were identified. Data were analyzed as a four-factor randomized complete block design with years, defoliation levels, sampling times and cultivars as main factors. The number of rotted roots was increased with the defoliation level and was significantly higher for SD sugar beets (3748 roots ha–1. No significant differences were found between C and MD treatments (1543 and 2116 roots ha–1, respectively. Rival was the most susceptible cultivar to root rots. Sugar beets were more susceptible to rotting 15 and 40 DAD (2778 and 2998 roots ha–1. The causal agents of root rots were the fungi, Fusarium spp., Rhizopus stolonifer, Macrophomina phaseolina and Rhizoctonia solani.

  10. Two genes conferring resistance to Pythium stalk rot in maize inbred line Qi319.

    Science.gov (United States)

    Song, Feng-Jing; Xiao, Ming-Gang; Duan, Can-Xing; Li, Hong-Jie; Zhu, Zhen-Dong; Liu, Bao-Tao; Sun, Su-Li; Wu, Xiao-Fei; Wang, Xiao-Ming

    2015-08-01

    Stalk rots are destructive diseases in maize around the world, and are most often caused by the pathogen Pythium, Fusarium and other fungi. The most efficient management for controlling stalk rots is to breed resistant cultivars. Pythium stalk rot can cause serious yield loss on maize, and to find the resistance genes from the existing germplasm is the basis to develop Pythium-resistance hybrid lines. In this study, we investigated the genetic resistance to Pythium stalk rot in inbred line Qi319 using F2 and F2:3 population, and found that the resistance to Pythium inflatum in Qi319 was conferred by two independently inherited dominant genes, RpiQI319-1 and RpiQI319-2. Linkage analysis uncovered that the RpiQI319-1 co-segregated with markers bnlg1203, and bnlg2057 on chromosome 1, and that the RpiQI319-2 locus co-segregated with markers umc2069 and bnlg1716 on chromosome 10. The RpiQI319-1 locus was further mapped into a ~500-kb interval flanked by markers SSRZ33 and SSRZ47. These results will facilitate marker-assisted selection of Pythium stalk rot-resistant cultivars in maize breeding. To our knowledge, this is the first report on the resistance to P. inflatum in the inbred line Qi319, and is also the first description of two independently inherited dominant genes conferring the resistance of Pythium stalk rot in maize.

  11. Fungal cell-wall lytic enzymes, antifungal metabolite(s) production, and characterization from Streptomyces exfoliatus MT9 for controlling fruit-rotting fungi.

    Science.gov (United States)

    Choudhary, Bharti; Nagpure, Anand; Gupta, Rajinder K

    2014-12-01

    An antifungal actinomycete strain MT9 was isolated from Loktak Lake, Manipur, India and its cultural characteristics, fatty acid methyl ester, 16S rRNA gene analysis suggests that strain MT9 is identical to Streptomyces exfoliatus. Strain MT9 displayed strong and broad-spectrum antagonism towards several fruit-rotting fungi by mycelial growth suppression. Crude fungal cell-wall lytic enzymes, i.e., chitinase, β-1,3-glucanase, and protease produced by S. exfoliatus MT9 were optimally active at pH 8.0 and 50 °C, pH 5.0 and 60 °C, pH 9.0 and 70 °C, respectively. All three mycolytic enzymes had good stability over a wide pH range of 5.0-10.0, with protease being more thermostable than both chitinase and β-1,3-glucanase. Interestingly zymogram analysis revealed that S. exfoliatus MT9 secretes six distinct chitinase isoenzymes with approximate molecular weights of 9.42, 13.93, 27.87, 36.43, 54.95, 103.27 kDa, six active protease isoenzymes with apparent molecular weights of 12.45, 30.20, 37.45, 46.32, 52.46, 131.46 kDa, and an active band of 119.39 kDa as β-1,3-glucanase enzyme. Extracellular fluid and its organic solvent extracts also exhibited inhibitory activity to various fruit-rotting fungi. The MIC value of n-butanol extract was 2-25 µg/ml against tested fruit-rotting fungi. Antifungal secondary metabolite(s) was found to be polyene in nature. To the best of our knowledge, this is the first report on extracellular production of fungal cell-wall lytic enzymes and antifungal metabolites by bioactive S. exfoliatus MT9 under submerged fermentation.

  12. Application of ligninolytic potentials of a white-rot fungus Ganoderma lucidum for degradation of lindane.

    Science.gov (United States)

    Kaur, Harsimran; Kapoor, Shammi; Kaur, Gaganjyot

    2016-10-01

    Lindane, a broad-spectrum organochlorine pesticide, has caused a widespread environmental contamination along with other pesticides due to wrong agricultural practices. The high efficiency, sustainability and eco-friendly nature of the bioremediation process provide an edge over traditional physico-chemical remediation for managing pesticide pollution. In the present study, lindane degradation was studied by using a white-rot fungus, Ganoderma lucidum GL-2 strain, grown on rice bran substrate for ligninolytic enzyme induction at 30 °C and pH 5.6 after incorporation of 4 and 40 ppm lindane in liquid as well as solid-state fermentation. The estimation of lindane residue was carried out by gas chromatography coupled to mass spectrometry (GC-MS) in the selected ion monitoring mode. In liquid-state fermentation, 100.13 U/ml laccase, 50.96 U/ml manganese peroxidase and 17.43 U/ml lignin peroxidase enzymes were obtained with a maximum of 75.50 % lindane degradation on the 28th day of incubation period, whereas under the solid-state fermentation system, 156.82 U/g laccase, 80.11 U/g manganese peroxidase and 18.61 U/g lignin peroxidase enzyme activities with 37.50 % lindane degradation were obtained. The lindane incorporation was inhibitory to the production of ligninolytic enzymes and its own degradation but was stimulatory for extracellular protein production. The dialysed crude enzyme extracts of ligninolytic enzymes were though efficient in lindane degradation during in vitro studies, but their efficiencies tend to decrease with an increase in the incubation period. Hence, lindane-degrading capabilities of G. lucidum GL-2 strain make it a potential candidate for managing lindane bioremediation at contaminated sites.

  13. Diversification and population structure in common beans (Phaseolus vulgaris L..

    Directory of Open Access Journals (Sweden)

    Matthew W Blair

    Full Text Available Wild accessions of crops and landraces are valuable genetic resources for plant breeding and for conserving alleles and gene combinations in planta. The primary genepool of cultivated common beans includes wild accessions of Phaseolus vulgaris. These are of the same species as the domesticates and therefore are easily crossable with cultivated accessions. Molecular marker assessment of wild beans and landraces is important for the proper utilization and conservation of these important genetic resources. The goal of this research was to evaluate a collection of wild beans with fluorescent microsatellite or simple sequence repeat markers and to determine the population structure in combination with cultivated beans of all known races. Marker diversity in terms of average number of alleles per marker was high (13 for the combination of 36 markers and 104 wild genotypes that was similar to the average of 14 alleles per marker found for the 606 cultivated genotypes. Diversity in wild beans appears to be somewhat higher than in cultivated beans on a per genotype basis. Five populations or genepools were identified in structure analysis of the wild beans corresponding to segments of the geographical range, including Mesoamerican (Mexican, Guatemalan, Colombian, Ecuadorian-northern Peruvian and Andean (Argentina, Bolivia and Southern Peru. The combined analysis of wild and cultivated accessions showed that the first and last of these genepools were related to the cultivated genepools of the same names and the penultimate was found to be distinct but not ancestral to the others. The Guatemalan genepool was very novel and perhaps related to cultivars of race Guatemala, while the Colombian population was also distinct. Results suggest geographic isolation, founder effects or natural selection could have created the different semi-discrete populations of wild beans and that multiple domestications and introgression were involved in creating the diversity of

  14. Physical and chemical characteristics of common bean varieties

    Directory of Open Access Journals (Sweden)

    Marcio de Barros

    2016-04-01

    Full Text Available The common bean (Phaseolus vulgaris L. is one of the most widely consumed legumes in the world, but nevertheless different varieties vary with respect to their physical and chemical aspects. This study evaluated the physical and chemical characteristics (color, hardness after cooking, water absorption capacity, cooking time, integrity of the beans after cooking, proximate composition and mineral composition of the following varieties of the common bean: Carioca, IAPAR 81, Saracura, Juriti, Pérola, Colibri and IAPAR 31, all destined for both the internal Brazilian and external markets. The varieties studied had different proximate compositions and contents of the following minerals: K, Ca, N, Mg, S, Cu, Fe and Mn; but identical contents of P, Zn and B. The beans were classified as small in size. The Carioca variety showed the lowest values for L* (41.29 and H* (57.22, and the highest values for a* (12.17, its beans being redder and darker than the others. The Saracura variety showed the lowest degree of hydration (95.70 g/100g, cooking time (22.67 min. and whole beans after cooking (30%, while the Pérola variety showed the highest values for these same parameters, 106.77 g/100g, 43.67 min. and 82.16%, respectively. No correlation was observed between the calcium and magnesium contents of the beans and the hardness of the raw bean, degree of hydration during maceration, cooking time and integrity of the cooked beans. According to the characteristics studied, the Saracura variety is a good option for both industrial and domestic use.

  15. Broad Leaves in Strong Flow

    CERN Document Server

    Miller, Laura

    2013-01-01

    Flexible broad leaves are thought to reconfigure in the wind and water to reduce the drag forces that act upon them. Simple mathematical models of a flexible beam immersed in a two-dimensional flow will also exhibit this behavior. What is less understood is how the mechanical properties of a leaf in a three-dimensional flow will passively allow roll up into a cone shape and reduce both drag and vortex induced oscillations. In this fluid dynamics video, the flows around the leaves are compared with those of simplified sheets using 3D numerical simulations and physical models. For some reconfiguration shapes, large forces and oscillations due to strong vortex shedding are produced. In the actual leaf, a stable recirculation zone is formed within the wake of the reconfigured cone. In physical and numerical models that reconfigure into cones, a similar recirculation zone is observed with both rigid and flexible tethers. These results suggest that the three-dimensional cone structure in addition to flexibility is ...

  16. The Paleobiolinguistics of the Common Bean (Phaseolus vulgaris L.

    Directory of Open Access Journals (Sweden)

    Cecil H. Brown

    2014-10-01

    Full Text Available Paleobiolinguistics is used to determine when and where the common bean (Phaseolus vulgaris L. developed significance for prehistoric groups of Native America. Dates and locations of proto-languages for which common bean terms reconstruct generally accord with crop-origin and dispersal information from plant genetics and archaeobotany. Paleobiolinguistic and other lines of evidence indicate that human interest in the common bean became significant primarily with the widespread development of a village‐farming way of life in the New World rather than earlier when squash and maize and a few other crops became important.

  17. Remote sensing monitoring of bean crop cultivated in the Boi Branco watershed (Brazil)

    Science.gov (United States)

    Soares da Silva, Natália; Sánchez-Román, Rodrigo; Marchamalo Sacristán, Miguel; Rodriguez-Sinobas, Leonor

    2016-04-01

    Nowadays, the concern of the effect of climate change on water availability on a global scale is getting bigger and bigger. In average, about 65 % of the world water consumption is devoted to irrigated agriculture. In countries such as Brazil, water scarcity has been a main issue in populated areas (i.e. São Paulo) in the last two years. This has affected not only water availability for the population but also irrigation water to maintain crop yield and Brazilian economy. Remote sensing is a tool broadly used in multiple fields of science such as water management in irrigated agriculture. Actually, there are several satellites moving around the earth, and they take images of every place in a weekly or biweekly basis. The images can be downloaded from the internet site at no cost by the users. Then, they are used to determine the vegetation index NDVI which is based in the energy reflected in red and infrared spectrum and it depends on the vegetation photosynthetic activity. Within the above context, this study focus on remote sensing monitoring of a bean crop located in the basin of Boi Branco, São Paulo - Brazil, which is irrigated by pivot center. The images from the Landsat and Modis satellites were downloaded throughout the bean growing period and then, they were processed and analyzed with the Qgis software. In addition, soil moisture was measured by several TDR probe sensors deployed in the irrigated area, and the leaf area index was measured as well in the field. Both variables were used to estimate the Normalized Difference Vegetation Index (NDVI) for each bean phenology state.

  18. Climate and host plant availability impact the future distribution of the bean leaf beetle (Cerotoma trifurcata).

    Science.gov (United States)

    Berzitis, Emily A; Minigan, Jordan N; Hallett, Rebecca H; Newman, Jonathan A

    2014-09-01

    The bean leaf beetle, Cerotoma trifurcata, has become a major pest of soybean throughout its North American range. With a changing climate, there is the potential for this pest to further expand its distribution and become an increasingly severe pest in certain regions. To examine this possibility, we developed bioclimatic envelope models for both the bean leaf beetle, and its most important agronomic host plant, soybean (Glycine max). These two models were combined to examine the potential future pest status of the beetle using climate change projections from multiple general circulation models (GCMs) and climate change scenarios. Despite the broad tolerances of soybean, incorporation of host plant availability substantially decreased the suitable and favourable areas for the bean leaf beetle as compared to an evaluation based solely on the climate envelope of the beetle, demonstrating the importance of incorporating biotic interactions in these predictions. The use of multiple GCM-scenario combinations also revealed differences in predictions depending on the choice of GCM, with scenario choice having less of an impact. While the Norwegian model predicted little northward expansion of the beetle from its current northern range limit of southern Ontario and overall decreases in suitable and favourable areas over time, the Canadian and Russian models predict that much of Ontario and Quebec will become suitable for the beetle in the future, as well as Manitoba under the Russian model. The Russian model also predicts expansion of the suitable and favourable areas for the beetle over time. Two predictions that do not depend on our choice of GCM include a decrease in suitability of the Mississippi Delta region and continued favourability of the southeastern United States.

  19. Structure-based functional characterization of repressor of toxin (Rot), a central regulator of Staphylococcus aureus virulence.

    Science.gov (United States)

    Killikelly, April; Benson, Meredith A; Ohneck, Elizabeth A; Sampson, Jared M; Jakoncic, Jean; Spurrier, Brett; Torres, Victor J; Kong, Xiang-Peng

    2015-01-01

    Staphylococcus aureus is responsible for a large number of diverse infections worldwide. In order to support its pathogenic lifestyle, S. aureus has to regulate the expression of virulence factors in a coordinated fashion. One of the central regulators of the S. aureus virulence regulatory networks is the transcription factor repressor of toxin (Rot). Rot plays a key role in regulating S. aureus virulence through activation or repression of promoters that control expression of a large number of critical virulence factors. However, the mechanism by which Rot mediates gene regulation has remained elusive. Here, we have determined the crystal structure of Rot and used this information to probe the contribution made by specific residues to Rot function. Rot was found to form a dimer, with each monomer harboring a winged helix-turn-helix (WHTH) DNA-binding motif. Despite an overall acidic pI, the asymmetric electrostatic charge profile suggests that Rot can orient the WHTH domain to bind DNA. Structure-based site-directed mutagenesis studies demonstrated that R(91), at the tip of the wing, plays an important role in DNA binding, likely through interaction with the minor groove. We also found that Y(66), predicted to bind within the major groove, contributes to Rot interaction with target promoters. Evaluation of Rot binding to different activated and repressed promoters revealed that certain mutations on Rot exhibit promoter-specific effects, suggesting for the first time that Rot differentially interacts with target promoters. This work provides insight into a precise mechanism by which Rot controls virulence factor regulation in S. aureus.

  20. In Vitro Antagonism of Bacillus thuringiensis NCIM2130 against Sclerotium rolfsii Sacc., A Stem Rot Pathogen of Groundnut

    OpenAIRE

    Ravindra. R. Rakh; Laxman S. Raut; Anand V. Manwar

    2016-01-01

    Stem rot is one of the most drastic diseases of groundnut that cause major crop loss. Stem rot pathogen of groundnut, Sclerotium rolfsii, was isolated from the infected groundnut stem. Present investigation was started to search for effective biocontrol agent against Sclerotium rolfsii. To find effective biocontrol agent, 120 Bacillus spp. isolated from various rhizospheric soils of healthy plants, screened in vitro against the stem rot pathogen by dual culture technique. Out of these Bacillu...

  1. Genetic variation for seed yield and some of agro-morphological traits in faba bean (Vicia faba L. genotypes

    Directory of Open Access Journals (Sweden)

    Peyman SHARIFI

    2015-11-01

    Full Text Available  An investigation was carried out to select the most successful faba bean genotype(s and to estimate the heritability for seed yield and some of agro-morphological traits. The results of analysis of variance indicated that the studied genotypes differed significantly for all of the traits. For 100-seed weight, two north's of Iran landraces (G1 and G2 and two improved breeding cultivars containing France (G4 and Barrakat (G10 possessed the heaviest seed weight, 161.33, 139, 119.67 and 166 g, respectively. G1 and G10 presented the highest values for dry seed weight (473.98 and 495.44 g m-2, respectively. G1 and G10 showed significantly higher magnitude values of the other traits. Broad sense heritability (h2 estimates were generally high to moderate for all of the studied traits. The highest estimates of broad sense heritability was inscribed as 98 % for pod length, dry seed length and dry seed width and 0.95 for hundred seed weight. The estimated broad-sense heritability was 0.80 for dry seed yield per m2. These results suggested that the environmental factors had a small effect on the inheritance of traits with high heritability. High estimates of heritability indicated that selection based on mean would be successful in improving of these traits. High heritability indicate an additive gene action for the traits, and hence, possible trait improvement through selection. Path coefficient analysis indicated that the traits containing day to harvesting, pod length, hundred seed weight and number of stems per plant play major role in seed yield determination of faba bean. Attention should be paid to these characters for augmentation of seed yield and these traits could be used as selection criteria in faba bean breeding programs. These findings indicate that selection for each or full of the above traits would be accompanied by high yielding ability under such conditions. 

  2. Advances in faba bean genetics and genomics

    Directory of Open Access Journals (Sweden)

    Donal Martin O'Sullivan

    2016-08-01

    Full Text Available Vicia faba L, is a globally important grain legume whose main centres of diversity are the Fertile Crescent and Mediterranean basin. Because of its small number (six of exceptionally large and easily observed chromosomes it became a model species for plant cytogenetics the 70s and 80s. It is somewhat ironic therefore, that the emergence of more genomically tractable model plant species such as Arabidopsis and Medicago coincided with a marked decline in genome research on the formerly favoured plant cytogenetic model. Thus, as ever higher density molecular marker coverage and dense genetic and even complete genome sequence maps of key crop and model species emerged through the 1990s and early 2000s, genetic and genome knowledge of Vicia faba lagged far behind other grain legumes such as soybean, common bean and pea.However, cheap sequencing technologies have stimulated the production of deep transcriptome coverage from several tissue types and numerous distinct cultivars in recent years. This has permitted the reconstruction of the faba bean meta-transcriptome and has fuelled development of extensive sets of Simple Sequence Repeat and Single Nucleotide Polymorphism (SNP markers. Genetics of faba bean stretches back to the 1930s, but it was not until 1993 that DNA markers were used to construct genetic maps. A series of Random Amplified Polymorphic DNA-based genetic studies mainly targeted at quantitative loci underlying resistance to a series of biotic and abiotic stresses were conducted during the 1990’s and early 2000s. More recently, SNP-based genetic maps have permitted chromosome intervals of interest to be aligned to collinear segments of sequenced legume genomes such as the model legume Medicago truncatula, which in turn opens up the possibility for hypotheses on gene content, order and function to be translated from model to crop. Some examples of where knowledge of gene content and function have already been productively exploited are

  3. 76 FR 34087 - Broad Stakeholder Survey

    Science.gov (United States)

    2011-06-10

    ... SECURITY Broad Stakeholder Survey AGENCY: National Protection and Programs Directorate, DHS. ACTION: 60-day... comments concerning the Broad Stakeholder Survey. DATES: Comments are encouraged and will be accepted until.... The Broad Stakeholder Survey is designed to gather stakeholder feedback on the effectiveness of...

  4. 78 FR 20119 - Broad Stakeholder Survey

    Science.gov (United States)

    2013-04-03

    ... SECURITY Broad Stakeholder Survey AGENCY: National Protection and Programs Directorate, DHS. ACTION: 30-day... soliciting comments concerning the Broad Stakeholder Survey. DHS previously published this ICR in the Federal... responders across the Nation. The Broad Stakeholder Survey is designed to gather stakeholder feedback on...

  5. 77 FR 50144 - Broad Stakeholder Survey

    Science.gov (United States)

    2012-08-20

    ... SECURITY Broad Stakeholder Survey AGENCY: National Protection and Programs Directorate, DHS. ACTION: 60-day... comments concerning the Broad Stakeholder Survey. DATES: Comments are encouraged and will be accepted until... across the Nation. The Broad Stakeholder Survey is designed to gather stakeholder feedback on...

  6. The introduction of the common bean (Phaseolus vulgaris L.) into Western Europe and the phenotypic variation of dry beans collected in the Netherlands.

    NARCIS (Netherlands)

    Zeven, A.C.

    1997-01-01

    The first introduction of common bean from Central/South America into Western Europe most likely took place around 1500. The attractive bean seeds and their easy transportation warranted numerous additional introductions, not only from the Americas, but also from other areas where the common bean ha

  7. Enhanced bioprocessing of lignocellulose: Wood-rot fungal saccharification and fermentation of corn fiber to ethanol

    Science.gov (United States)

    Shrestha, Prachand

    This research aims at developing a biorefinery platform to convert corn-ethanol coproduct, corn fiber, into fermentable sugars at a lower temperature with minimal use of chemicals. White-rot (Phanerochaete chrysosporium), brown-rot (Gloeophyllum trabeum) and soft-rot (Trichoderma reesei) fungi were used in this research to biologically break down cellulosic and hemicellulosic components of corn fiber into fermentable sugars. Laboratory-scale simultaneous saccharification and fermentation (SSF) process proceeded by in-situ cellulolytic enzyme induction enhanced overall enzymatic hydrolysis of hemi/cellulose from corn fiber into simple sugars (mono-, di-, tri-saccharides). The yeast fermentation of hydrolyzate yielded 7.1, 8.6 and 4.1 g ethanol per 100 g corn fiber when saccharified with the white-, brown-, and soft-rot fungi, respectively. The highest corn-to-ethanol yield (8.6 g ethanol/100 g corn fiber) was equivalent to 42 % of the theoretical ethanol yield from starch and cellulose in corn fiber. Cellulase, xylanase and amylase activities of these fungi were also investigated over a week long solid-substrate fermentation of corn fiber. G. trabeum had the highest activities for starch (160 mg glucose/mg protein.min) and on day three of solid-substrate fermentation. P. chrysosporium had the highest activity for xylan (119 mg xylose/mg protein.min) on day five and carboxymethyl cellulose (35 mg glucose/mg protein.min) on day three of solid-substrate fermentation. T. reesei showed the highest activity for Sigma cell 20 (54.8 mg glucose/mg protein.min) on day 5 of solid-substrate fermentation. The effect of different pretreatments on SSF of corn fiber by fungal processes was examined. Corn fiber was treated at 30 °C for 2 h with alkali [2% NaOH (w/w)], alkaline peroxide [2% NaOH (w/w) and 1% H2O 2 (w/w)], and by steaming at 100 °C for 2 h. Mild pretreatment resulted in improved ethanol yields for brown- and soft-rot SSF, while white-rot and Spezyme CP SSFs showed

  8. Detection and characterization of p-coumaric acid hydroxylase in mung bean, Vigna mungo, seedlings.

    Science.gov (United States)

    Kojima, M; Takeuchi, W

    1989-02-01

    A new p-coumaric acid (4-hydroxycinnamic acid) hydroxylase was detected in mung bean seedlings treated with tentoxin, a fungal toxin, in which polyphenol oxidase that hydroxylates a wide variety of monophenols in vitro was completely eliminated. The enzyme required molecular oxygen and showed a pH optimum of 5.0. The enzyme acted only on p-coumaric acid (Km, 3.0 X 10(-5) M), while its specificity for the electron donor was rather broad. The Km value for NADPH (1.5 X 10(-4) M) was much lower than that for L-ascorbic acid (1.0 X 10(-2) M), although the Vmax value was almost the same with both electron donors. The enzyme was potently inhibited by beta-mercaptoethanol (Ki, 3.5 X 10(-6) M) and diethyldithiocarbamate (Ki, 2.3 X 10(-4) M), but was insensitive to p-chloromercuribenzoate. The enzyme was localized in the cell organelles which sedimented between mitochondria and endplasmic reticulum on sucrose density gradient centrifugation. The enzyme activity in the seedling was changed in response to induction by light in a manner suggesting its involvement in biosynthesis of phenolic compounds in mung bean seedlings.

  9. THE ROLE OF BACTERIAL SYMBIONTS IN AMINO ACID COMPOSITION OF BLACK BEAN APHIDS

    Institute of Scientific and Technical Information of China (English)

    MingGan; De-ChengDing; Xue-xiaMiao

    2003-01-01

    To evaluate the role of bacterial symbionts ( Buchnera spp. ) in the black bean aphids ( Aphis craccivora Koch), the aphids were treated with the antibiotic, rifampicin, to eliminate their intracellular symbiotic bacteria. Analysis of protein and amino acid concentration in 7-day-old of aposymbiotic aphids showed that the total protein content per mg fresh weight was significantly reduced by 29 %, but free amino acid titers were increased by 17% . The ratio of the essential amino acids was in general only around 20% essential amino acids in phloem sap of broad bean, whereas it was 44% and 37% in symbiotic and aposymbiotic aphids, respectively,suggesting that the composition of the free amino acids was unbalanced. For example, the essential amino acid,threonine represented 21. 6% of essential amino acids in symbiotic aphids, but it was only 16.7% in aposymbiotic aphids. Likewise, two nonessential amino acids, tyrosine and serine, represented 8.9% and 5.6% of total amino acids in symbiontic aphids, respectively, but they enhanced to 21.1% and 13.6% in aposymbiotic aphids. It seems likely that the elevated free amino acid concentration in aposymbiotic aphids was caused by the limited protein anabolism as the result of the unbalanced amino acid composition.

  10. Inactivation of jack bean urease by allicin.

    Science.gov (United States)

    Juszkiewicz, Adam; Zaborska, Wiesława; Sepioł, Janusz; Góra, Maciej; Zaborska, Anna

    2003-10-01

    Allicin--diallyl thiosulfinate--is the main biologically active component of freshly crushed garlic. Allicin was synthesized as described elsewhere and was tested for its inhibitory ability against jack bean urease in 20 mM phosphate buffer, pH 7.0 at 22 degrees C. The results indicate that allicin is an enzymatic inactivator. The loss of urease activity was irreversible, time- and concentration dependent and the kinetics of the inactivation was biphasic; each phase, obeyed pseudo-first-order kinetics. The rate constants for inactivation were measured for the fast and slow phases and for several concentrations of allicin. Thiol reagents, and competitive inhibitor (boric acid) protected the enzyme from loss of enzymatic activity. The studies demonstrate that urease inactivation results from the reaction between allicin and the SH-group, situated in the urease active site (Cys592).

  11. An antifungal peptide from baby lima bean.

    Science.gov (United States)

    Wang, H X; Ng, T B

    2006-12-01

    A 6-kDa antifungal peptide with inhibitory activity on mycelial growth in Fusarium oxysporum, Mycosphaerella arachidicola, and Physalospora piricola was isolated from baby lima beans. The peptide suppressed growth in M. arachidicola with an IC(50) of 0.87 muM and inhibited activity of HIV-1 reverse transcriptase with an IC(50) of 4 muM. The peptide exhibited an N-terminal amino acid sequence similar to those of leguminous defensins. The isolation procedure comprised ion exchange chromatography on diethylaminoethyl (DEAE)-cellulose, affinity chromatography on Affi-gel blue gel, ion exchange chromatography on carboxymethyl (CM)-cellulose, and gel filtration by fast protein liquid chromatography on Superdex 75. The peptide was unadsorbed on DEAE-cellulose and Affi-gel blue gel but was adsorbed on CM-cellulose.

  12. The onset of faba bean farming in the Southern Levant

    Science.gov (United States)

    Caracuta, Valentina; Barzilai, Omry; Khalaily, Hamudi; Milevski, Ianir; Paz, Yitzhak; Vardi, Jacob; Regev, Lior; Boaretto, Elisabetta

    2015-10-01

    Even though the faba bean (Vicia faba L.) is among the most ubiquitously cultivated crops, very little is known about its origins. Here, we report discoveries of charred faba beans from three adjacent Neolithic sites in the lower Galilee region, in the southern Levant, that offer new insights into the early history of this species. Biometric measurements, radiocarbon dating and stable carbon isotope analyses of the archaeological remains, supported by experiments on modern material, date the earliest farming of this crop to ~10,200 cal BP. The large quantity of faba beans found in these adjacent sites indicates intensive production of faba beans in the region that can only have been achieved by planting non-dormant seeds. Selection of mutant-non-dormant stock suggests that the domestication of the crop occurred as early as the 11th millennium cal BP. Plant domestication| Vicia faba L.| Pre-Pottery Neolithic B| radiocarbon dating| Δ13C analysis.

  13. Ethiopian soya bean and sunflower value chains : Opportunities and challenges

    NARCIS (Netherlands)

    Wijnands, J.H.M.; Dufera Gurmesa, N.; Lute, J.C.M.; Loo, van E.N.

    2011-01-01

    This report analyses the business opportunities of soya beans and sunflowers. The opportunities are addressed to firms in all levels of the value chain ranging from consumers to farmers in the Ethiopian agriculture.

  14. Caffeine content of Ethiopian Coffea arabica beans

    Directory of Open Access Journals (Sweden)

    Maria Bernadete Silvarolla

    2000-03-01

    Full Text Available The coffee germplasm bank of the Instituto Agronômico de Campinas has many Coffea arabica accessions from Ethiopia, which is considered the primary center of genetic diversity in coffee plants. An evaluation of the caffeine content of beans from 99 progenies revealed intra- and inter-progeny variability. In 68 progenies from the Kaffa region we found caffeine values in the range 0.46-2.82% (mean 1.18%, and in 22 progenies from Illubabor region these values ranged from 0.42 to 2.90% (mean 1.10%. This variability could be exploited in a breeding program aimed at producing beans with low-caffeine content.O banco de germoplasma de café do Instituto Agronômico de Campinas contém grande número de introduções de Coffea arabica provenientes da Etiópia, considerada centro de diversidade genética desta espécie. A avaliação dos teores de cafeína nas sementes de 99 progênies revelou a presença de variabilidade entre e dentro das progênies, de acordo com a região de origem das introduções. Entre as 68 progênies da região de Kaffa encontraram-se valores de cafeína entre 0.46 e 2.82% (média 1.18% e entre as 22 progênies de Illubabor obtiveram-se plantas cujos teores de cafeína variaram de 0.42 a 2.90% (média 1.10%. A variabilidade aqui relatada poderá ser explorada na produção de uma variedade de café com baixos teores de cafeína nas sementes.

  15. Insects diversity in lima bean (Phaseolus lunatus

    Directory of Open Access Journals (Sweden)

    WIWIN SETIAWATI

    2005-10-01

    Full Text Available Lima bean (Phaseolus lunatus is a vegetable which usually made as a home yard plant for Indonesian people to fulfill their daily needs. This plant has not been produced in the large number by the farmer. So it is hard to find in the market. Lima bean is light by many kind of insect. Inventory, identification and the study of insect taxon to this plant is being done to collect some information about the insect who life in the plant. The research was done in Balitsa experiment garden in the district of Lembang in Bandung regency on November 2003-February 2004, the experiment start at 4 weeks age, at the height of 1260 m over the sea level. The observation was made systematically by absolute method (D-vac macine and relative method (sweeping net. The research so that there were 26 species of phytofagous insect, 9 species of predator insect, 6 species of parasitoid insect, 4 species of pollinator and 14 species of scavenger insect. According to the research the highest species number was got in the 8th week (3rd sampling, which had 27 variety of species, so the highest diversity was also got in this with 2,113 point. Aphididae and Cicadellidae was the most insect found in roay plant. The research also had high number of species insect so the diversity of insect and evenness become high. A community will have the high stability if it is a long with the high diversity. High evenness in community that has low species dominance and high species number of insect so the high of species richness.

  16. FTIR and XPS analysis of the changes in bamboo chemical structure decayed by white-rot and brown-rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Guoqi [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China); Wang, Lihai, E-mail: xu12nefu@sina.cn [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China); Liu, Junliang [Research Institute of Wood Industry, Chinese Academy of Forestry, Beijing 100091 (China); Wu, Jinzhuo [College of Engineering and Technology, Northeast Forestry University, Harbin 150040 (China)

    2013-09-01

    In order to investigate different types of decay mechanisms in bamboo (Phyllostachys edulis), the chemical structure and microstructure of bamboo samples decayed by P. chrysosporium (White-rot) and G. trabeum (Brown-rot) for 12 weeks were studied. The analysis methods include fourier transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS), and scanning electron spectroscopy (SEM). By using the SEM method, it was found that attacks to parenchyma cells and places near the inner skin of bamboo were the most frequent and the vessels were the primary paths for the spread of mycelium in the bamboo. FTIR and XPS results showed that the crystallinity (I1425/I896) of bamboo decreased after being decayed by these two fungi and the crystalline cellulose in bamboo was degraded. The white-rot P. chrysosporium had stronger degradability on lignin compared to hemicellulose and cellulose in bamboo. And the brown-rot G. trabeum had preferential degradability on hemicellulose fraction over cellulose and lignin. Oxidation and hydrolysis surface reactions occurred during the process of decay, but the reaction rates for cellulose and lignin were different.

  17. Effects of processing on bean (Phaseolus vulgaris L.) protein quality.

    OpenAIRE

    Poel, van der, A.F.B.

    1990-01-01

    In animal production, feeding has an important impact on productivity and health of animals and feed composition is known to influence protein and energy metabolism directly. For monogastric animals complete diets are manufactured in which feed ingredients are used to supply the energy yielding and other nutrients. The common bean ( Phaseolus vulgaris L.) is such an ingredient.In common beans ( Phaseolus vulgaris L.) the supply of nutrients is often lower than is expected from its chemical an...

  18. Variation in caffeine concentration in single coffee beans.

    Science.gov (United States)

    Fox, Glen P; Wu, Alex; Yiran, Liang; Force, Lesleigh

    2013-11-13

    Twenty-eight coffee samples from around the world were tested for caffeine levels to develop near-infrared reflectance spectroscopy (NIRS) calibrations for whole and ground coffee. Twenty-five individual beans from five of those coffees were used to develop a NIRS calibration for caffeine concentration in single beans. An international standard high-performance liquid chromatography method was used to analyze for caffeine content. Coffee is a legal stimulant and possesses a number of heath properties. However, there is variation in the level of caffeine in brewed coffee and other caffeinated beverages. Being able to sort beans on the basis of caffeine concentration will improve quality control in the level of caffeine in those beverages. The range in caffeine concentration was from 0.01 mg/g (decaffeinated coffee) to 19.9 mg/g (Italian coffee). The majority of coffees were around 10.0-12.0 mg/g. The NIRS results showed r(2) values for bulk unground and ground coffees were >0.90 with standard errors caffeine concentration of individual coffee beans. One application of this calibration could be sorting beans on caffeine concentration to provide greater quality control for high-end markets. Furthermore, bean sorting may open new markets for novel coffee products.

  19. Microsomal transformation of organophosphorus pesticides by white rot fungi.

    Science.gov (United States)

    Jauregui, Juan; Valderrama, Brenda; Albores, Arnulfo; Vazquez-Duhalt, Rafael

    2003-12-01

    The enzymatic mechanism for the transformation of organophosphorus pesticides (OPPs) by different white-rot fungi strains was studied. With the exception of Ganoderma applanatum 8168, all strains from a collection of 17 different fungi cultures were able to deplete parathion. Three strains showing the highest activities were selected for further studies: Bjerkandera adusta 8258, Pleurotus ostreatus 7989 and Phanerochaete chrysosporium 3641. These strains depleted 50 to 96% of terbufos, azinphos-methyl, phosmet and tribufos after four-days exposure to the pesticides. In order to identify the cellular localization of the transformation activity, the extracellular and microsomal fractions of Pleuronts ostreatus 7989 were evaluated in vitro. While the activities of ligninolytic enzymes (lignin peroxidase, manganese peroxidase and laccase) were detected in the extracellular fraction, no enzymatic modification of any of the five pesticides tested could be found, suggesting the intracellular origin of the transformation activity. In accordance with this observation the microsomal fraction was found able to transform three OPPs with the following rates: 10 micromol mg prot(-1) h(-1) for phosmet, 5.7 micromol mg prot(-1) h(-1) for terbufos, and 2.2 micromol mg prot(-1) h(-1) for azinphos-methyl. The products from these reactions and from the transformation of trichlorfon and malathion, were identified by mass-spectrometry. These results, supported by specific inhibition experiments and the stringent requirement for NADPH during the in vitro assays suggest the involvement of a cytochrome P450.

  20. Identification of naphthalene metabolism by white rot fungus Pleurotus eryngii.

    Science.gov (United States)

    Hadibarata, Tony; Teh, Zee Chuang; Rubiyatno; Zubir, Meor Mohd Fikri Ahmad; Khudhair, Ameer Badr; Yusoff, Abdull Rahim Mohd; Salim, Mohd Razman; Hidayat, Topik

    2013-10-01

    The use of biomaterials or microorganisms in PAHs degradation had presented an eye-catching performance. Pleurotus eryngii is a white rot fungus, which is easily isolated from the decayed woods in the tropical rain forest, used to determine the capability to utilize naphthalene, a two-ring polycyclic aromatic hydrocarbon as source of carbon and energy. In the meantime, biotransformation of naphthalene to intermediates and other by-products during degradation was investigated in this study. Pleurotus eryngii had been incubated in liquid medium formulated with naphthalene for 14 days. The presence of metabolites of naphthalene suggests that Pleurotus eryngii begin the ring cleavage by dioxygenation on C1 and C4 position to give 1,4-naphthaquinone. 1,4-Naphthaquinone was further degraded to benzoic acid, where the proposed terepthalic acid is absent in the cultured extract. Further degradation of benzoic acid by Pleurotus eryngii shows the existence of catechol as a result of the combination of decarboxylation and hydroxylation process. Unfortunately, phthalic acid was not detected in this study. Several enzymes, including manganese peroxidase, lignin peroxidase, laccase, 1,2-dioxygenase and 2,3-dioxygenase are enzymes responsible for naphthalene degradation. Reduction of naphthalene and the presence of metabolites in liquid medium showed the ability of Pleurotus eryngii to utilize naphthalene as carbon source instead of a limited glucose amount.

  1. Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.

    Science.gov (United States)

    Blanco-Ulate, Barbara; Amrine, Katherine C H; Collins, Thomas S; Rivero, Rosa M; Vicente, Ariel R; Morales-Cruz, Abraham; Doyle, Carolyn L; Ye, Zirou; Allen, Greg; Heymann, Hildegarde; Ebeler, Susan E; Cantu, Dario

    2015-12-01

    Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for botrytized wine production. Using an integrated transcriptomics and metabolomics approach, we demonstrate that noble rot alters the metabolism of cv Sémillon berries by inducing biotic and abiotic stress responses as well as ripening processes. During noble rot, B. cinerea induced the expression of key regulators of ripening-associated pathways, some of which are distinctive to the normal ripening of red-skinned cultivars. Enhancement of phenylpropanoid metabolism, characterized by a restricted flux in white-skinned berries, was a common outcome of noble rot and red-skinned berry ripening. Transcript and metabolite analyses together with enzymatic assays determined that the biosynthesis of anthocyanins is a consistent hallmark of noble rot in cv Sémillon berries. The biosynthesis of terpenes and fatty acid aroma precursors also increased during noble rot. We finally characterized the impact of noble rot in botrytized wines. Altogether, the results of this work demonstrated that noble rot causes a major reprogramming of berry development and metabolism. This desirable interaction between a fruit and a fungus stimulates pathways otherwise inactive in white-skinned berries, leading to a greater accumulation of compounds involved in the unique flavor and aroma of botrytized wines.

  2. Occurrence of Root Rot and Vascular Wilt Diseases in Roselle (Hibiscus sabdariffa L.) in Upper Egypt.

    Science.gov (United States)

    Hassan, Naglaa; Shimizu, Masafumi; Hyakumachi, Mitsuro

    2014-03-01

    Roselle (Hibiscus sabdariffa L.) family Malvaceae is an important crop used in food, cosmetics and pharmaceutics industries. Roselle is cultivated mainly in Upper Egypt (Qena and Aswan governorates) producing 94% of total production. Root rot disease of roselle is one of the most important diseases that attack both seedlings and adult plants causing serious losses in crop productivity and quality. The main objective of the present study is to identify and characterize pathogens associated with root rot and wilt symptoms of roselle in Qena, Upper Egypt and evaluate their pathogenicity under greenhouse and field condition. Fusarium oxysporum, Macrophomina phaseolina, Fusarium solani, Fusarium equiseti and Fusarium semitectum were isolated from the natural root rot diseases in roselle. All isolated fungi were morphologically characterized and varied in their pathogenic potentialities. They could attack roselle plants causing damping-off and root rot/wilt diseases in different pathogenicity tests. The highest pathogenicity was caused by F. oxysporum and M. phaseolina followed by F. solani. The least pathogenic fungi were F. equiseti followed by F. semitectum. It obviously noted that Baladi roselle cultivar was more susceptible to infection with all tested fungi than Sobhia 17 under greenhouse and field conditions. This is the first report of fungal pathogens causing root rot and vascular wilt in roselle in Upper Egypt.

  3. Involvement of phenolic compounds in the susceptibility of bananas to crown rot. A review

    Directory of Open Access Journals (Sweden)

    Lassois, L.

    2012-01-01

    Full Text Available Crown rot of bananas, caused by a fungal parasitic complex, is one of the main quality defects of exported bananas. Major variations in the susceptibility of bananas to crown rot have been observed in different production zones. The physiological state of the banana fruit at harvest is said to influence its response to pathogenic attack and thus to modulate its susceptibility to crown rot. The susceptibility of bananas to this disease, however, appears to be influenced by many pre-harvest factors, although the underlying defense mechanisms have not been clearly identified. A recent report based on molecular analyses suggests that phenolic compounds might be involved in the different variations in the susceptibility of bananas to crown rot. Results of other earlier studies point to an involvement of phenolic compounds in the defensive reactions of banana plants against various pathogens. The present paper reviews the current state of knowledge on the variations in the susceptibility of bananas to crown rot and takes stock of what is known about phenolic compounds in relation to their potential involvement in the defense mechanisms of the banana plant.

  4. Genetic analysis of partial resistance to basal stem rot (Sclerotinia sclerotiorum in sunflower

    Directory of Open Access Journals (Sweden)

    Amouzadeh Masoumeh

    2013-01-01

    Full Text Available Basal stem rot, caused by Sclerotinia sclerotiorum (Lib. de Bary, is one of the major diseases of sunflower (Helianthus annuus L. in the world. Quantitative trait loci (QTLs implicated in partial resistance to basal stem rot disease were identified using 99 recombinant inbred lines (RILs from the cross between sunflower parental lines PAC2 and RHA266. The study was undertaken in a completely randomized design with three replications under controlled conditions. The RILs and their parental lines were inoculated with a moderately aggressive isolate of S. sclerotiorum (SSKH41. Resistance to disease was evaluated by measuring the percentage of necrosis area three days after inoculation. QTLs were mapped using an updated high-density SSR and SNP linkage map. ANOVA showed significant differences among sunflower lines for resistance to basal stem rot (P≤0.05. The frequency distribution of lines for susceptibility to disease showed a continuous pattern. Composite interval mapping analysis revealed 5 QTLs for percentage of necrotic area, localized on linkage groups 1, 3, 8, 10 and 17. The sign of additive effect was positive in 5 QTLs, suggesting that the additive allele for partial resistance to basal stem rot came from the paternal line (RHA266. The phenotypic variance explained by QTLs (R2 ranged from 0.5 to 3.16%. Identified genes (HUCL02246_1, GST and POD, and SSR markers (ORS338, and SSL3 encompassing the QTLs for partial resistance to basal stem rot could be good candidates for marker assisted selection.

  5. Behavior of hybrid corn crop as second rot incidence in West Region Paraná

    Directory of Open Access Journals (Sweden)

    Jean Sérgio Rosset

    2013-09-01

    Full Text Available The objective of this study was to evaluate the incidence and influence of stalk rot and ear in cultivation of hybrid corn second crop in west region Paraná. The experiment was conducted in randomized block design with six transgenic corn hybrids (DKB 330PRO, P4285HX, P3646HX, 30F53HX, P3340HX and P3161HX with four replications at spacing of 0.90 m between rows and 0.20 m between plants. The characteristics evaluated were: number of healthy and symptomatic plants, number of ears healthy and symptomatic and total number of spikes. After harvest, we assessed the length of ears healthy and symptomatic, bulk grain ears healthy and symptomatic, thousand grain weight of ears healthy and symptomatic, and grain mass per spike weighted, thousand grain weight and weighted productivity. The hybrid P3646HX showed 100% of plants with stem base rot (Colletotrichum graminicola and soft rot cob (Erwinia chrysanthemi pv. Zeae and 100% of ears with symptoms of soft rot, followed by hybrid 30F53HX, DKB 330PRO with 34.9 and 29.1% of ears with symptoms of soft rot respectively. The hybrid DKB330PRO showed healthy spikes and patients with superior size, resulting in less interference in the grain yield. The hybrid P3340 productivity was higher, with 7952 kg ha-1 , followed by hybrid 30F53HX and DKB330PRO. A positive correlation between agronomic characteristics and grain yield.

  6. Investigation on Resistance against White-rot and Brown-rot Fungi of some Fire Retardant Chemicals in Laminate Flooring

    Directory of Open Access Journals (Sweden)

    Ferhat Özdemir

    2013-11-01

    Full Text Available The objective of this study is to determine the effects of some fire retardants on decay resistance of the high density fiberboard (HDF panels covered with overlay, decorative and balance papers. Borax (BX, boric acid (BA, ammonium polyphosphate (APP and alpha-x (AX as fire retardant (FR chemicals were added as powder into the fibers made from 50% pine and 50% beech woods at 3%, 6% and 9% levels based on oven-dry fiber weight. HDF panels (400x400x6.5mm were produced. After, surfaces of the panels were coated with overlay, decorative and balance papers. The panels were exposed to white (Ceriporiopsis subvermisphora and brown (Coniophora puteana decay fungi. The decay resistance of panels was investigated. The results showed that the addition of FR chemicals increased resistance against white and brown rot fungi of the panels. Thus, it was ascertained that concentration and type of FR chemicals are effective on decay resistance of laminate flooring

  7. Fungitoxicity of some higher plants and synergistic activity of their essential oils against Sclerotium rolfsii sacc. causing foot-rot disease of barley.

    Science.gov (United States)

    Singh, R K

    Twenty five plant species were screened for their volatile components against hyphal growth and sclerotia formation of Sclerotium rolfsii causing foot rot disease of barley (Hordeum vulgare). Leaves of Chenopodium ambrosioides (CA), Lippia alba (LA), Azadirachta indica (AI) and Eucalyptus globulus (EG) were found to be strongly toxic. Their volatile active factors were isolated in the form of essential oils which were tested for toxicity individually and in six combinations (1:1 v/v) viz. CA-LA, LA-AI, CA-AI, CA-EG, and EG-AI. The oil combinations were found to be more fungitoxic than the individual oils. The CA-LA, LA-AI, EG-AI, and CA-EG combinations exhibited a broad fnngitoxic spectrum while CA-AI, LA-EG combinations possessed a narrow range of toxicity. None of the six oil combinations showed phytotoxic behaviour on seed germination, seedling growth and general morphology of Hordeum vulgare.

  8. Chitosan and oligochitosan enhance ginger (Zingiber officinale Roscoe) resistance to rhizome rot caused by Fusarium oxysporum in storage

    Science.gov (United States)

    The ability of chitosan and oligochitosan to enhance the resistance of ginger (Zingiber officinale) to rhizome rot, caused by Fusarium oxysporum, in storage was investigated. Both chitosan and oligochitosan at 1 and 5 g/L significantly inhibited rhizome rot, relative to the untreated control, with...

  9. Mucor rot - An emerging postharvest disease of mandarin fruit caused by Mucor piriformis and other Mucor spp. in California

    Science.gov (United States)

    In recent years, an emerging, undescribed postharvest fruit rot disease was observed on mandarin fruit after extended storage in California. We collected decayed mandarin fruit from three citrus packinghouses in the Central Valley of California in 2015 and identified this disease as Mucor rot caused...

  10. New insights into the ecological interaction between grape berry microorganisms and Drosophila flies during the development of sour rot.

    Science.gov (United States)

    Barata, André; Santos, Sara Correia; Malfeito-Ferreira, Manuel; Loureiro, Virgílio

    2012-08-01

    In this work, we studied the ecological interactions between grape berry microorganisms and Drosophila sp. flies involved in sour rot disease during grape ripening. After veráison the total microbial counts of grape berries affected by sour rot increased from about 2 log CFU/g of berries to more than 7 log CFU/g. Berry damage provoked a clear shift in yeast diversity from basidiomycetes to ascomycetous fermentative species. The latter were mostly Pichia terricola, Hanseniaspora uvarum, Candida zemplinina, and Zygoascus hellenicus. However, these species were not able to produce the metabolites characteristic of sour rot (gluconic and acetic acids) in inoculated berries. On the contrary, the acetic acid bacteria Gluconacetobacter saccharivorans produced high levels of these acids, mainly when berries were incubated in the presence of the insect Drosophila sp. Sour rot was not observed when grape bunches were physically separated from insects, even when berries were artificially injured. The wounds made in berry skin healed in the absence of insects, thus preventing the development of sour rot. Therefore, in the vineyard, the induction of sour rot depends on the contamination of wounded berries by a microbial consortium--yeasts and acetic acid bacteria--transported by drosophilid insects which disseminate sour rot among damaged berries. In the absence of these insects, plant defense mechanisms are effective and lead to skin healing, preventing disease spread. Thus, we showed that Drosophila sp. act as a vector for microorganisms associated with grape sour rot disease.

  11. Multiplex detection and identification of bacterial pathogens causing potato blackleg and soft rot in Europe, using padlock probes

    NARCIS (Netherlands)

    Slawiak, M.; Doorn, van R.; Szemes, M.; Speksnijder, A.G.C.L.; Waleron, M.; Wolf, van der J.M.; Lojkowska, E.; Schoen, C.D.

    2013-01-01

    The objective of this study was to develop a multiplex detection and identification protocol for bacterial soft rot coliforms, namely Pectobacterium wasabiae (Pw), Pectobacterium atrosepticum (Pba) and Dickeya spp., responsible for potato blackleg and tuber soft rot. The procedures were derived from

  12. rDNA-based characterization of a new binucleate Rhizoctonia spp. causing root rot on kale in Brazil

    NARCIS (Netherlands)

    Kuramae, E.E.; Buzeto, A.L.; Nakatani, A.K.; Souza, N.L.

    2007-01-01

    In this paper we present the first report of the occurrence of a binucleate Rhizoctonia spp. causing hypocotyl and root rot in kale in Brazil. Rhizoctonia spp. were isolated from kale (Brassica oleracea var. acephala) with symptoms of hypocotyl and root rot. The isolates, characterized as binucleate

  13. Effect of Chitosan on Rhizome Rot Disease of Turmeric Caused by Pythium aphanidermatum.

    Science.gov (United States)

    Anusuya, Sathiyanarayanan; Sathiyabama, Muthukrishnan

    2014-01-01

    Chitosan was evaluated for its potential to induce antifungal hydrolases in susceptible turmeric plant (Curcuma longa L.). Under field conditions, the application of chitosan (crab shell) to turmeric plants by foliar spray method induces defense enzymes such as chitinases and chitosanases. Such an increase in enzyme activity was enhanced by spraying chitosan (0.1% w/v) on leaves of turmeric plants at regular intervals. Gel electrophoresis revealed new chitinase and chitosanase isoforms in leaves of turmeric plants treated with chitosan. Treated turmeric plants showed increased resistance towards rhizome rot disease caused by Pythium aphanidermatum, whereas control plants expressed severe rhizome rot disease. Increased activity of defense enzymes in leaves of chitosan treated turmeric plants may play a role in restricting the development of disease symptoms. The eliciting properties of chitosan make chitosan a potential antifungal agent for the control of rhizome rot disease of turmeric.

  14. Control of Fusarium verticillioides, cause of ear rot of maize, by Pseudomonas fluorescens

    DEFF Research Database (Denmark)

    Nayaka, Siddaiah Chandra; Shankar, Akarere C. Udaya; Reddy, Munagala S.;

    2009-01-01

    Abstract BACKGROUND: Maize is one of the staple food crops grown in India. Fusarium verticillioides (Sacc.) Nirenberg is the most important fungal pathogen of maize, associated with diseases such as ear rot and kernel rot. Apart from the disease, it is capable of producing fumonisins, which have...... elicited considerable attention over the past decade owing to their association with animal disease syndromes. Hence, the present study was conducted to evaluate ecofriendly approaches by using a maize rhizosphere isolate of Pseudomonas fluorescens (Trev.) Mig. and its formulation to control ear rot...... disease and fumonisin accumulation, and also to study the capacity to promote growth and yield of maize. In vitro assays were conducted to test the efficacy of P. fluorescens as a seed treatment on seed germination, seedling vigour and also the incidence of F. verticillioides in different maize cultivars...

  15. Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Jensen, Bo; Clausen, Carol;

    2005-01-01

    wood preservatives were the most commonly used preservatives for pressure treatment of wood for building constructions. Because of a suspicion about tolerance toward copper components, a soil block test was undertaken to clarify the effect of two copper based preservatives, copper citrate and ACQ......Serpula lacrymans (Wulfen : Fries) Schröter, the dry rot fungus, is considered the most (Wulfen : Fries) Schröterthe dry rot fungus, is considered the most economically important wood decay fungus in temperate regions of the world i.e. northern Europe, Japan and Australia. Previously copper based......-D, on the dry rot fungus, Serpula lacrymans compared to an alternative non-copper containing wood preservative. The extensive use of copper-based wood preservatives has hastened the need for understanding why some fungi are able to attack copper-treated wood. The copper tolerance of S. lacrymans and other brown...

  16. Survey of root rot diseases of sugar bett in Central Greece

    Directory of Open Access Journals (Sweden)

    Karadimos Dimitros A.

    2006-01-01

    Full Text Available An extensive survey was conducted during the summer and autumn of 2004 in sugar beet fields in the area of Larissa, Thessaly region, with plants showing symptoms of root rot diseases. The aim of the monitoring was to identify the causal agents of root rot diseases. In total, 76 sugar beet fields were surveyed and 5-10 diseased roots were examined from each field. Isolations, carried out on PDA, showed that two main fungal pathogens causing root rot were Rhizoctonia solani and Phytophthora cryptogea. The former was isolated in 46% of the fields and the latter in 38% of the fields. In addition, Rhizopus stolonifer, Fusarium spp., Scerotium rolfsii and Rhizoctonia violacea were isolated in 14%, 7%, 4% and 1% of the fields respectively. In most of the surveyed fields only one pathogen species was isolated and only in a few of them more than one fungal species was identified.

  17. ISOLATION AND IDENTIFICATION OF BACTERIAL CAUSED SOFT ROT DISEASE ON CARROT (Daucus carota L. LOCAL VARIETY IN BALI

    Directory of Open Access Journals (Sweden)

    Ni Wayan Desi Bintari

    2015-03-01

    Full Text Available Soft rot bacteria infection in carrot tuber (D. carota L. causes severe economic losses. Soft rot disease can be caused by various bacteria belonging to Enterobacteriaceae. This study aimed to isolate and identify bacteria as causal agent of soft rot disease in local carrot variety in Bali. Samples were collected at Badung Tradisional Market, Denpasar, Bali. Isolation was carried out by serial dilution method (Platting Method. Eight bacteria (BL1, BL2, BL3, BL4, BL5, BL6, BL7 and BL8 were isolated from soft rot tuber. BL6 isolate showed positive result in Postulat Koch test that caused soft rot on carrot tuber. The result of identification by Microgen™ GnA+B-ID System and identification book Bergeys’s Manual of Determinative Bacteriology Ninth Edition (Holt et al., 1994, BL6 was identified as Citrobacter.

  18. The Chaperone ClpX Stimulates Expression of Staphylococcus aureus Protein A by Rot Dependent and Independent Pathways

    DEFF Research Database (Denmark)

    Jelsbak, Lotte; Ingmer, Hanne; Valihrach, Lukás;

    2010-01-01

    The Clp ATPases (Hsp100) constitute a family of closely related proteins that have protein reactivating and remodelling activities typical of molecular chaperones. In Staphylococcus aureus the ClpX chaperone is essential for virulence and for transcription of spa encoding Protein A. The present...... study was undertaken to elucidate the mechanism by which ClpX stimulates expression of Protein A. For this purpose, we prepared antibodies directed against Rot, an activator of spa transcription, and demonstrated that cells devoid of ClpX contain three-fold less Rot than wild-type cells. By varying Rot...... expression from an inducible promoter we showed that expression of Protein A requires a threshold level of Rot. In the absence of ClpX the Rot content is reduced below this threshold level, hence, explaining the substantially reduced Protein A expression in the clpX mutant. Experiments addressed...

  19. Soybean (Glycine max L. Merr. sprouts germinated under red light irradiation induce disease resistance against bacterial rotting disease.

    Directory of Open Access Journals (Sweden)

    Radhika Dhakal

    Full Text Available Specific wavelengths of light can exert various physiological changes in plants, including effects on responses to disease incidence. To determine whether specific light wavelength had effects on rotting disease caused by Pseudomonas putida 229, soybean sprouts were germinated under a narrow range of wavelengths from light emitting diodes (LEDs, including red (650-660, far red (720-730 and blue (440-450 nm or broad range of wavelength from daylight fluorescence bulbs. The controls were composed of soybean sprouts germinated in darkness. After germination under different conditions for 5 days, the soybean sprouts were inoculated with P. putida 229 and the disease incidence was observed for 5 days. The sprouts exposed to red light showed increased resistance against P. putida 229 relative to those grown under other conditions. Soybean sprouts germinated under red light accumulated high levels of salicylic acid (SA accompanied with up-regulation of the biosynthetic gene ICS and the pathogenesis- related (PR gene PR-1, indicating that the resistance was induced by the action of SA via de novo synthesis of SA in the soybean sprouts by red light irradiation. Taken together, these data suggest that only the narrow range of red light can induce disease resistance in soybean sprouts, regulated by the SA-dependent pathway via the de novo synthesis of SA and up-regulation of PR genes.

  20. Population genetics and phylogenetic relationships of beetles (Coleoptera: Histeridae and Staphylinidae) from the Sonoran Desert associated with rotting columnar cacti.

    Science.gov (United States)

    Pfeiler, Edward; Johnson, Sarah; Richmond, Maxi Polihronakis; Markow, Therese A

    2013-12-01

    Dozens of arthropod species are known to feed and breed in the necrotic tissues (rots) of columnar cacti in the Sonoran Desert. Because the necrotic patches are ephemeral, the associated arthropods must continually disperse to new cacti and therefore the populations of any given species are expected to show very little local genetic differentiation. While this has been found to be true for the cactophilic Drosophila, the evolutionary histories and characteristics of other arthropods inhabiting the same necrotic patches, especially the beetles, have yet to be examined. Here we used nucleotide sequence data from segments of the mitochondrial 16S rRNA and cytochrome c oxidase subunit I (COI) genes to examine population structure and demographic history of three sympatric beetle species (Coleoptera: Histeridae and Staphylinidae) collected on senita cactus (Lophocereus schottii) from six widely-separated localities on the Baja California peninsula of northwestern Mexico. Two histerids, Iliotona beyeri and Carcinops gilensis, and an unidentified staphylinid, Belonuchus sp., showed little or no population structure over a broad geographic area on the peninsula, consistent with the prediction that these beetles should show high dispersal ability. Demographic tests revealed varying levels of historical population expansion among the beetle species analyzed, which are discussed in light of their ecologies and concurrent biogeographic events. Additionally, phylogenetic analyses of COI sequences in Carcinops collected on a variety of columnar cacti from both peninsular and mainland Mexico localities revealed several species-level partitions, including a putative undescribed peninsular species that occurred sympatrically with C. gilensis on senita.

  1. Soybean (Glycine max L. Merr.) sprouts germinated under red light irradiation induce disease resistance against bacterial rotting disease.

    Science.gov (United States)

    Dhakal, Radhika; Park, Euiho; Lee, Se-Weon; Baek, Kwang-Hyun

    2015-01-01

    Specific wavelengths of light can exert various physiological changes in plants, including effects on responses to disease incidence. To determine whether specific light wavelength had effects on rotting disease caused by Pseudomonas putida 229, soybean sprouts were germinated under a narrow range of wavelengths from light emitting diodes (LEDs), including red (650-660), far red (720-730) and blue (440-450 nm) or broad range of wavelength from daylight fluorescence bulbs. The controls were composed of soybean sprouts germinated in darkness. After germination under different conditions for 5 days, the soybean sprouts were inoculated with P. putida 229 and the disease incidence was observed for 5 days. The sprouts exposed to red light showed increased resistance against P. putida 229 relative to those grown under other conditions. Soybean sprouts germinated under red light accumulated high levels of salicylic acid (SA) accompanied with up-regulation of the biosynthetic gene ICS and the pathogenesis- related (PR) gene PR-1, indicating that the resistance was induced by the action of SA via de novo synthesis of SA in the soybean sprouts by red light irradiation. Taken together, these data suggest that only the narrow range of red light can induce disease resistance in soybean sprouts, regulated by the SA-dependent pathway via the de novo synthesis of SA and up-regulation of PR genes.

  2. Phytophthora root and stem rot – new disease of Ilex aquifolium "Myrtifolia” in Poland

    Directory of Open Access Journals (Sweden)

    Leszek B. Orlikowski

    2014-08-01

    Full Text Available Phytophthora cinnamomi was often isolated from rotted roots and stems of English holly "Myrtifolia" together with Alternaria alternata, Cylindrocarpon destructanss, Fusarium avenaceum and other fungal species. Inoculation of leaf blades and stem parts of 4 species and 12 holly cultivars with P. cinnamomi showed the spread of rot symptoms on the most of them. On Ilex crenata tissues necrosis did not develop or spread slowly. Isolation of P. cinnamomi only from one holly cultivar in surveyed nursery indicate on transmission of the pathogen with imported young plants.

  3. Model of Fabry-Pérot-type electromagnetic modes of a cylindrical nanowire

    DEFF Research Database (Denmark)

    Bordo, Vladimir

    2010-01-01

    The rigorous theory of normal electromagnetic modes of a cylindrical nanowire of finite length is developed. The exact integral equation which determines the solution of Maxwell's equations obeying the boundary conditions at the whole nanowire surface is derived. The nanowire normal (Fabry......-Pérot) modes are defined as non-trivial solutions of the source-free equation. The approach is considered in more detail for elongated nanowires whose length is much larger than their diameter. The resonance condition obtained for a single-mode nanowire resembles the formula for the Fabry-Pérot resonator...

  4. The Three-Arm Michelson-Fabry-Pérot Detector for Gravitational Waves

    Institute of Scientific and Technical Information of China (English)

    Chao-Guang Huang; Yong-Gui Li; Ning Zhu

    2016-01-01

    A three-arm Michelson-Fabry-Pérot detector for gravitational waves is designed.It consists of three Michelson Fabry-Pérot interferometers,one for each pair of arms.The new detector can be used to confirm whether the gravitational waves are in general relativity polarization states and to set the strong constraints on non-GR gravitational wave polarization states.By the new detectors,the angular resolution of sources can be improved significantly.With the new detector,it is easier to search for and confirm a gravitational wave signal in the observation data.

  5. New record of Phytophthora root and stem rot of Lavandula angustifolia

    Directory of Open Access Journals (Sweden)

    Leszek B. Orlikowski

    2013-12-01

    Full Text Available Phytophthora cinnamomi was isolated from rotted root and stem parts of lavender as well as from soil taken from containers with diseased plants. Additionally Botrytis cinerea, Fusarium spp. and Sclerotinia sclerotiorum were often isolated from diseased tissues. P. cinnamomi colonised leaves and stem parts of 4 lavender species in laboratory trials and caused stem rot of plants in greenhouse experiments. Cardinal temperature for in vitro growth were about 7,5 and 32°C with optimum 25-27,5°C. The species colonised stem tissues at temperature ranged from 10° to 32°C.

  6. Biocontrol Characteristics of Bacillus Species in Suppressing Stem Rot of Grafted Cactus Caused by Bipolaris cactivora

    OpenAIRE

    Sooil Bae; Sang Gyu Kim; Young Ho Kim

    2013-01-01

    One of the most important limiting factors for the production of the grafted cactus in Korea is the qualitative and quantitative yield loss derived from stem rots especially caused by Bipolaris cactivora. This study is aimed to develop microbial control agents useful for the control of the bipolaris stem rot. Two bacteria (GA1-23 and GA4-4) selected out of 943 microbial isolates because of their strong antibiotic activity against B. cactivora were identified as Bacillus subtilis and B. amylol...

  7. Functional Genomics of Lignocellulose Degradation in the Basidiomycete White Rot Schizophyllum commune

    Energy Technology Data Exchange (ETDEWEB)

    Ohm, Robin A. [Joint Genome Inst., Walnut Creek, CA (United States); Tegelaar, Martin [Utrecht Univ. (Netherlands); Henrissat, Bernard [Univ. of Marseille (France); Brewer, Heather M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Purvine, Samuel O. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Baker, Scott [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wosten, Han A. B. [Utrecht Univ. (Netherlands); Grigoriev, Igor V. [Joint Genome Inst., Walnut Creek, CA (United States); Lugones, Luis G. [Utrecht Univ. (Netherlands)

    2013-03-01

    White and brown rot fungi are among the most important wood decayers in nature. Although more than 50 genomes of Basidiomycete white and brown rots have been sequenced by the Joint Genome Institute, there is still a lot to learn about how these fungi degrade the tough polymers present in wood. In particular, very little is known about how these fungi regulate the expression of genes involved in lignocellulose degradation. Here, we used transcriptomics, proteomics, and promoter analysis in an effort to gain insight into the process of lignocellulose degradation.

  8. Trait associations in common bean genotypes grown under drought stress and field infestation by BSM bean fly

    Institute of Scientific and Technical Information of China (English)

    Daniel; Ambachew; Firew; Mekbib; Asrat; Asfaw; Stephen; E.Beebe; Matthew; W.Blair

    2015-01-01

    Understanding functional relations among plant traits and their modulation by growing conditions is imperative in designing selection strategies for breeding programs. This study assessed trait relationships among 196 common bean genotypes exposed to stresses for drought and field infestation of bean fly or bean stem maggot(BSM). The study was carried out at two locations and data was analyzed with linear correlation, path coefficient and genotype × trait biplot analyses. Multiple trait data related to mechanisms of drought and bean fly tolerance were collected on 196 genotypes grown under i) water deficit at mid-pod fill, or ii) unprotected against bean fly; iii) irrigated, well watered conditions, or iv) bean fly protection with chemicals. Seed yield exhibited positive and significant correlations with leaf chlorophyll content, vertical root pulling resistance, pod harvest index, pods per plant and seeds per pod at both phenotypic and genotypic levels under stress and non-stress conditions. Genotypic correlations of traits with seed yield were greater than their respective phenotypic correlations across environments indicating the greater contribution of genotypic factors to the trait correlation. Pods per plant and seeds per pod had high positive direct effects on seed yield both under stress and non-stress whereas pods per plant had the highest indirect effect on seed yield through pod harvest index under stress.In general, our results suggest that vertical root pulling resistance and pod harvest index are important selection objectives for improving seed yield in common beans under non-stress and stress conditions, and particularly useful for drought and BSM tolerance evaluation.

  9. Trait associations in common bean genotypes grown under drought stress and field infestation by BSM bean fly

    Directory of Open Access Journals (Sweden)

    Daniel Ambachew

    2015-08-01

    Full Text Available Understanding functional relations among plant traits and their modulation by growing conditions is imperative in designing selection strategies for breeding programs. This study assessed trait relationships among 196 common bean genotypes exposed to stresses for drought and field infestation of bean fly or bean stem maggot (BSM. The study was carried out at two locations and data was analyzed with linear correlation, path coefficient and genotype × trait biplot analyses. Multiple trait data related to mechanisms of drought and bean fly tolerance were collected on 196 genotypes grown under i water deficit at mid-pod fill, or ii unprotected against bean fly; iii irrigated, well watered conditions, or iv bean fly protection with chemicals. Seed yield exhibited positive and significant correlations with leaf chlorophyll content, vertical root pulling resistance, pod harvest index, pods per plant and seeds per pod at both phenotypic and genotypic levels under stress and non-stress conditions. Genotypic correlations of traits with seed yield were greater than their respective phenotypic correlations across environments indicating the greater contribution of genotypic factors to the trait correlation. Pods per plant and seeds per pod had high positive direct effects on seed yield both under stress and non-stress whereas pods per plant had the highest indirect effect on seed yield through pod harvest index under stress. In general, our results suggest that vertical root pulling resistance and pod harvest index are important selection objectives for improving seed yield in common beans under non-stress and stress conditions, and particularly useful for drought and BSM tolerance evaluation.

  10. Trait associations in common bean genotypes grown under drought stress and field infestation by BSM bean fly

    Institute of Scientific and Technical Information of China (English)

    Daniel Ambachew; Firew Mekbib; Asrat Asfaw; Stephen E. Beebe; Matthew W. Blaird

    2015-01-01

    Understanding functional relations among plant traits and their modulation by growing conditions is imperative in designing selection strategies for breeding programs. This study assessed trait relationships among 196 common bean genotypes exposed to stresses for drought and field infestation of bean fly or bean stem maggot (BSM). The study was carried out at two locations and data was analyzed with linear correlation, path coefficient and genotype × trait biplot analyses. Multiple trait data related to mechanisms of drought and bean fly tolerance were collected on 196 genotypes grown under i) water deficit at mid-pod fill, or ii) unprotected against bean fly;iii) irrigated, well watered conditions, or iv) bean fly protection with chemicals. Seed yield exhibited positive and significant correlations with leaf chlorophyll content, vertical root pulling resistance, pod harvest index, pods per plant and seeds per pod at both phenotypic and genotypic levels under stress and non-stress conditions. Genotypic correlations of traits with seed yield were greater than their respective phenotypic correlations across environments indicating the greater contribution of genotypic factors to the trait correlation. Pods per plant and seeds per pod had high positive direct effects on seed yield both under stress and non-stress whereas pods per plant had the highest indirect effect on seed yield through pod harvest index under stress. In general, our results suggest that vertical root pulling resistance and pod harvest index are important selection objectives for improving seed yield in common beans under non-stress and stress conditions, and particularly useful for drought and BSM tolerance evaluation.

  11. Major proteins of yam bean tubers.

    Science.gov (United States)

    Gomes, A V; Sirju-Charran, G; Barnes, J A

    1997-09-01

    The tuberous roots of the Mexican yam bean, jicama, (Pachyrhizus erosus L. Urban) contained large quantities of two acidic glycoproteins which accounted for more than 70% of the total soluble proteins (about 3 g per 100 g of tuber on a dry weight basis). The two major proteins, tentatively named YBG1 and YBG2, had apparent M(r)s of 28,000 and 26,000, respectively, by SDS-PAGE. A third protein named YBP22 which accounted for 2-5% of the total soluble proteins had an M(r) of 22,000. YBG1 and YBG2 exhibited great similarity on the basis of their amino acid composition and had identical N-terminal amino acid sequences. The first 23 amino acids in the N-terminal region of YBG2 were DDLPDYVDWRDYGAVTRIKNQGQ which showed strong homology with the papain class of cysteine proteases. YBG1 and YBG2 were found to bind to a Concanavalin A-Sepharose column and were also stained positively by a sensitive glycoprotein stain. Both glycoproteins exhibited cysteine proteolytic activity. In contrast, YBP22 showed sequence homology with several known protease inhibitors, and a polyclonal antibody raised against this protein cross reacted with soybean trypsin inhibitor.

  12. Melhoramento do feijoeiro Breeding of dry beans

    Directory of Open Access Journals (Sweden)

    Ibrahim O. Abrahão

    1960-01-01

    Full Text Available Os ensaios de variedades e linhagens de feijão, realizados no período de 1948 a 1957 pelo Seção de Genética e resumidamente aqui apresentados, vieram indicar que as variedades e linhagens do grupo Mulatinho e Chumbinho eram as mais produtivas. A partir dêste ano agrícola, novos ensaios comparativos de produção foram realizados, a fim de verificar o comportamento das variedades e linhagens existentes com as variedades recém-introduzidas e as novas linhagens selecionadas. As variedades comerciais e suas linhagens, estudadas neste trabalho, foram classificadas em oito grupos, com base nas observações realizadas principalmente sôbre o tipo de planta e característicos dos sementes, o saber: Mulatinho, Chumbinho, Rosinha, Roxinho, Manteiga, Prêto, Bico-de-Ouro e diversos. Dos oito ensaios analisados em detalhes e realizados em Campinas, chegou-se à conclusão de que as variedades dos grupos Prêta e Rosinha são as de maior capacidade produtiva, devendo ser intensificado o aproveitamento dêsses grupos no plano de melhoramento em execução. As do grupo Roxinho apresentam-se menos produtivas. A comparação das análises dos ensaios como látice e blocos ao acaso revelou uma eficiência média de ordem de 30% para o tipo látice nos oito ensaios analisados. A fim de observar se o pêso total de plantas por ocasião da colheita mostra correlação com a produção de grãos, determinou-se, para cada grupo, o índice entre essas duas variáveis. Observou-se que êstes índices são proporcionais à produção, servindo, assim, para melhor caracterizar os diversos grupos de variedades e linhagens de feijão.In spite of the fact that dry beans (Phaseolus vulgaris are one of the main sources of protein in the State of São Paulo, Brazil, they are considered a secondary crop and grown only in small patches or intercropped with coffee, sugar cane, or corn. The development of high yielding strains resistant to the most prevailing diseases, has

  13. Broad Prize: Do the Successes Spread?

    Science.gov (United States)

    Samuels, Christina A.

    2011-01-01

    When the Broad Prize for Urban Education was created in 2002, billionaire philanthropist Eli Broad said he hoped the awards, in addition to rewarding high-performing school districts, would foster healthy competition; boost the prestige of urban education, long viewed as dysfunctional; and showcase best practices. Over the 10 years the prize has…

  14. The fate of phosphorus fertilizer in Amazon soya bean fields.

    Science.gov (United States)

    Riskin, Shelby H; Porder, Stephen; Neill, Christopher; Figueira, Adelaine Michela e Silva; Tubbesing, Carmen; Mahowald, Natalie

    2013-06-05

    Fertilizer-intensive soya bean agriculture has recently expanded in southeastern Amazonia, and whereas intensive fertilizer use in the temperate zone has led to widespread eutrophication of freshwater ecosystems, the effects in tropical systems are less well understood. We examined the fate of fertilizer phosphorus (P) by comparing P forms and budgets across a chronosequence of soya bean fields (converted to soya beans between 2003 and 2008) and forests on an 800 km(2) soya bean farm in Mato Grosso, Brazil. Soya bean fields were fertilized with 50 kg P ha(-1) yr(-1) (30 kg P ha(-1) yr(-1) above what is removed in crops). We used modified Hedley fractionation to quantify soil P pools and found increases in less-plant-available inorganic pools and decreases in organic pools in agricultural soils compared with forest. Fertilizer P did not move below 20 cm. Measurements of P sorption capacity suggest that while fertilizer inputs quench close to half of the sorption capacity of fast-reacting pools, most added P is bound in more slowly reacting pools. Our data suggest that this agricultural system currently has a low risk of P losses to waterways and that long time-scales are required to reach critical soil thresholds that would allow continued high yields with reduced fertilizer inputs.

  15. Dispersive infrared spectroscopy measurements of atmospheric CO₂ using a Fabry-Pérot interferometer sensor.

    Science.gov (United States)

    Chan, K L; Ning, Z; Westerdahl, D; Wong, K C; Sun, Y W; Hartl, A; Wenig, M O

    2014-02-15

    In this paper, we present the first dispersive infrared spectroscopic (DIRS) measurement of atmospheric carbon dioxide (CO2) using a new scanning Fabry-Pérot interferometer (FPI) sensor. The sensor measures the optical spectra in the mid infrared (3,900 nm to 5,220 nm) wavelength range with full width half maximum (FWHM) spectral resolution of 78.8 nm at the CO2 absorption band (~4,280 nm) and sampling resolution of 20 nm. The CO2 concentration is determined from the measured optical absorption spectra by fitting it to the CO2 reference spectrum. Interference from other major absorbers in the same wavelength range, e.g., carbon monoxide (CO) and water vapor (H2O), was taken out by including their reference spectra in the fit as well. The detailed descriptions of the instrumental setup, the retrieval procedure, a modeling study for error analysis as well as laboratory validation using standard gas concentrations are presented. An iterative algorithm to account for the non-linear response of the fit function to the absorption cross sections due to the broad instrument function was developed and tested. A modeling study of the retrieval algorithm showed that errors due to instrument noise can be considerably reduced by using the dispersive spectral information in the retrieval. The mean measurement error of the prototype DIRS CO2 measurement for 1 minute averaged data is about ±2.5 ppmv, and down to ± 0.8ppmv for 10 minute averaged data. A field test of atmospheric CO2 measurements were carried out in an urban site in Hong Kong for a month and compared to a commercial non-dispersive infrared (NDIR) CO2 analyzer. 10 minute averaged data shows good agreement between the DIRS and NDIR measurements with Pearson correlation coefficient (R) of 0.99. This new method offers an alternative approach of atmospheric CO2 measurement featuring high accuracy, correction of non-linear absorption and interference of water vapor.

  16. Effect of fermented soya beans on diarrhoea and feed efficiency in weaned piglets

    NARCIS (Netherlands)

    Kiers, J.L.; Meijer, J.C.; Nout, M.J.R.; Rombouts, F.M.; Nabuurs, M.J.A.; Meulen, van der J.

    2003-01-01

    Aims: To evaluate anti-diarrhoeal and growth enhancing properties of fermented soya beans in weaned piglets. Methods and Results: In a first phase piglet diet, toasted full-fat soya beans (20%) were replaced with either cooked soya beans or Rhizopus microsporus or Bacillus subtilis fermented soya be

  17. Extraction and characterization of polysaccharides from green and roasted Coffea arabica beans.

    NARCIS (Netherlands)

    Oosterveld, A.; Harmsen, H.; Voragen, A.G.J.; Schols, H.A.

    2003-01-01

    Polysaccharides were sequentially extracted from green and roasted Coffea arabica beans with water (90 °C), EDTA, 0.05, 1, and 4 M NaOH and characterized chemically. Additionally, the beans were subjected to a single extraction with water at 170 °C. Green arabica coffee beans contained large proport

  18. Physicochemical characteristics of green coffee: comparison of graded and defective beans.

    Science.gov (United States)

    Ramalakshmi, K; Kubra, I R; Rao, L J M

    2007-06-01

    Defective (triage) coffee beans are beans rejected after separating the graded ones according to the size and color. These coffee beans represent about 15% to 20% of coffee production in India but are not utilized for beverages since these affect the quality of coffee brew. In the present study, physical characteristics such as bean density, brightness, titratable acidity, pH, moisture, and total soluble solids and also chemical composition, namely, caffeine, chlorogenic acids, lipids, sucrose, total polyphenols, and proteins, were evaluated in defective as well as in graded green coffee beans. The physical parameters such as weight, density, and brightness of defective coffee beans were low compared to the graded beans, which is due to the presence of immature, broken, bleached, and black beans. Caffeine content was low in triage beans compared to graded beans. Chlorogenic acids, one of the composition in coffee responsible for antioxidant activity, was found to be intact (marginally high in some cases) in defective coffee beans. Hence, triage coffee beans can be evaluated as a source of antioxidant or radical scavenging conserve for food systems.

  19. STORED COCOA BEANS QUALITY AFFECTED BY FERMENTATION AND EPHESTIA CAUTELLA WALKER (LEPIDOPTERA: PHYCITIDAE INFESTATION

    Directory of Open Access Journals (Sweden)

    OK.KY S. DHARMAPUTRA

    2000-01-01

    Full Text Available The effects of fermentation on Ephestia cautella population and cocoa bean s quality in terms of moisture content, fungal population, the percentage of insect-damaged and mouldy beans, lipid and free fatty acid contents during storage were investigated together with the effects of £. cautella infestation on the quality of stored cocoa beans and weight loss. Fermented and unfermented cocoa beans with initial moisture contents of 7 or 9% were placed in ventilated plastic jars (Ikg/jar and stored for 6 months under room conditions. Seven larvae of £. cautella instar IV (2 males and 5 females were introduced in each jar at the beginning of storage. Untreated jars contained only cocoa beans. Population of £. cautella on fermented cocoa beans with either initial moisture content of 7 or 9% was lower than that on unfermented beans during storage. The population either on fermented or unfermented cocoa beans with initial moisture content of 7% was lower than that of 9%, and the population of all treatments increased during storage. Moisture content of all treatments either on cocoa beans with initial moisture contents of 7 or 9% had the same pattern. The percentage of insect-damaged beans on fermented cocoa beans was lower than that on unfermented cocoa beans after 5 to 6 months of storage. The damaged beans on fermented cocoa after 6 months of storage was not different than on unfermented beans after 4 months of storage. The weig ht loss either on fermented or unfermented cocoa beans with initial moisture content of 9% was higher than that with initial moisture content of 7%. The weight loss on fermented cocoa beans either with mois ture content of 7 or 9% was lower than that on unfermented beans during storage. The weight loss either on fermented or unfermented cocoa beans increased during storage. The percentage of mouldy beans on cocoa infested with £. cautella tended to increase during storage, while on beans not infested with the insect it

  20. Evaluation of economically feasible, natural plant extract-based microbiological media for producing biomass of the dry rot biocontrol strain Pseudomonas fluorescens P22Y05 in liquid culture.

    Science.gov (United States)

    Khalil, Sadia; Ali, Tasneem Adam; Skory, Chris; Slininger, Patricia J; Schisler, David A

    2016-02-01

    The production of microbial biomass in liquid media often represents an indispensable step in the research and development of bacterial and fungal strains. Costs of commercially prepared nutrient media or purified media components, however, can represent a significant hurdle to conducting research in locations where obtaining these products is difficult. A less expensive option for providing components essential to microbial growth in liquid culture is the use of extracts of fresh or dried plant products obtained by using hot water extraction techniques. A total of 13 plant extract-based media were prepared from a variety of plant fruits, pods or seeds of plant species including Allium cepa (red onion bulb), Phaseolus vulgaris (green bean pods), and Lens culinaris (lentil seeds). In shake flask tests, cell production by potato dry rot antagonist Pseudomonas fluorescens P22Y05 in plant extract-based media was generally statistically indistinguishable from that in commercially produced tryptic soy broth and nutrient broth as measured by optical density and colony forming units/ml produced (P ≤ 0.05, Fisher's protected LSD). The efficacy of biomass produced in the best plant extract-based media or commercial media was equivalent in reducing Fusarium dry rot by 50-96% compared to controls. In studies using a high-throughput microbioreactor, logarithmic growth of P22Y05 in plant extract-based media initiated in 3-5 h in most cases but specific growth rate and the time of maximum OD varied as did the maximum pH obtained in media. Nutrient analysis of selected media before and after cell growth indicated that nitrogen in the form of NH4 accumulated in culture supernatants, possibly due to unbalanced growth conditions brought on by a scarcity of simple sugars in the media tested. The potential of plant extract-based media to economically produce biomass of microbes active in reducing plant disease is considerable and deserves further research.

  1. Volatile compounds of dry beans (Phaseolus vulgaris L.).

    Science.gov (United States)

    Oomah, B Dave; Liang, Lisa S Y; Balasubramanian, Parthiba

    2007-12-01

    Volatile compounds of uncooked dry bean (Phaseolus vulgaris L.) cultivars representing three market classes (black, dark red kidney and pinto) grown in 2005 were isolated with headspace solid phase microextraction (HS-SPME), and analyzed with gas chromatography mass spectrometry (GC-MS). A total of 62 volatiles consisting of aromatic hydrocarbons, aldehydes, alkanes, alcohols and ketones represented on average 62, 38, 21, 12, and 9 x 10(6) total area counts, respectively. Bean cultivars differed in abundance and profile of volatiles. The combination of 18 compounds comprising a common profile explained 79% of the variance among cultivars based on principal component analysis (PCA). The SPME technique proved to be a rapid and effective method for routine evaluation of dry bean volatile profile.

  2. Changes of physical properties of coffee beans during roasting

    Directory of Open Access Journals (Sweden)

    Jokanović Marija R.

    2012-01-01

    Full Text Available The effects of heating time on physical changes (weight, volume, texture and colour of coffee beans (Outspan and Guaxupe coffee were investigated. The roasting temperature of both samples was 170°C and samples for analysis were taken at the intervals of 7 minutes during 40 minutes of roasting. Total weight loss at the end of the roasting process was 14.43 % (light roasted and 17.15 % (medium to dark roasted for Outspan and Guaxupe coffee beans, respectively. Significant (P < 0.05 changes in the coffee bean breaking force values were noted between the 7th and 14th minutes, and statistically not significant (P > 0.05 between the 35th and 40th minutes of the roasting. According to the L* colour parameter as a criterion for the classification of roasted coffee colour (light, medium, dark, the Outspan sample was medium and Guaxupe sample was dark roasted.

  3. Rhizosphere acidification of faba bean, soybean and maize

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, L.L. [College of Resources and Environmental Sciences, China Agricultural University, Key Laboratory of Plant and Soil Interactions, Ministry of Education, Beijing, 100094 (China); Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100094 (China); Cao, J. [School of Life Science, Key Laboratory of Arid and Grassland Ecology, Lanzhou University, Lanzhou 730000 (China); Zhang, F.S. [College of Resources and Environmental Sciences, China Agricultural University, Key Laboratory of Plant and Soil Interactions, Ministry of Education, Beijing, 100094 (China); Li, L., E-mail: lilong@cau.edu.cn [College of Resources and Environmental Sciences, China Agricultural University, Key Laboratory of Plant and Soil Interactions, Ministry of Education, Beijing, 100094 (China)

    2009-07-01

    Interspecific facilitation on phosphorus uptake was observed in faba bean/maize intercropping systems in previous studies. The mechanism behind this, however, remained unknown. Under nitrate supply, the difference in rhizosphere acidification potential was studied by directly measuring pH of the solution and by visualizing and quantifying proton efflux of roots between faba bean (Vicia faba L. cv. Lincan No.5), soybean (Glycine max L. cv. Zhonghuang No. 17) and maize (Zea mays L. cv. Zhongdan No.2) in monoculture and intercrop, supplied without or with 0.2 mmol L{sup -1} P as KH{sub 2}PO{sub 4}. The pH of the nutrient solution grown faba bean was lower than initial pH of 6.0 from day 1 to day 22 under P deficiency, whereas the pH of the solution with maize was declined from day 13 after treatment. Growing soybean increased solution pH irrespective of P supply. Under P deficiency, the proton efflux of faba bean both total (315.25 nmol h{sup -1} plant{sup -1}) and specific proton efflux (0.47 nmol h{sup -1} cm{sup -1}) was greater than that those of soybean (21.80 nmol h{sup -1} plant{sup -1} and 0.05 nmol h{sup -1} cm{sup -1}, respectively). Faba bean had much more ability of rhizosphere acidification than soybean and maize. The result can explain partly why faba bean utilizes sparingly soluble P more effectively than soybean and maize do, and has an important implication in understanding the mechanism behind interspecific facilitation on P uptake by intercropped species.

  4. Influenza virus antigenicity and broadly neutralizing epitopes.

    Science.gov (United States)

    Air, Gillian M

    2015-04-01

    A vaccine formulation that would be effective against all strains of influenza virus has long been a goal of vaccine developers, but antibodies after infection or vaccination were seen to be strain specific and there was little evidence of cross-reactive antibodies that neutralized across subtypes. Recently a number of broadly neutralizing monoclonal antibodies have been characterized. This review describes the different classes of broadly neutralizing antibodies and discusses the potential of their therapeutic use or for design of immunogens that induce a high proportion of broadly neutralizing antibodies.

  5. Low-Income US Women Under-informed of the Specific Health Benefits of Consuming Beans.

    Directory of Open Access Journals (Sweden)

    Donna M Winham

    Full Text Available Bean consumption can reduce chronic disease risk and improve nutrition status. Consumer knowledge of bean health benefits could lead to increased intakes. Low-income women have poorer health and nutrition, but their level of knowledge about bean health benefits is unknown. Beans are a familiar food of reasonable cost in most settings and are cultural staples for Hispanics and other ethnicities. Study objectives were to assess awareness of bean health benefits among low-income women, and to evaluate any differences by acculturation status for Hispanic women in the Southwestern United States.A convenience sample of 406 primarily Mexican-origin (70% low-income women completed a survey on knowledge of bean health benefits and general food behaviors. Principal components analysis of responses identified two summary scale constructs representing "bean health benefits" and "food behaviors." Acculturation level was the main independent variable in chi-square or ANOVA.The survey completion rate was 86% (406/471. Most women agreed or strongly agreed that beans improved nutrition (65% and were satiating (62%. Over 50% answered 'neutral' to statements that beans could lower LDL cholesterol (52%, control blood glucose (56% or reduce cancer risk (56%, indicating indifference or possible lack of knowledge about bean health benefits. There were significant differences by acculturation for beliefs that beans aid weight loss and intestinal health. Scores on the bean health benefits scale, but not the food behavior scale, also differed by acculturation.Limited resource women have a favorable view of the nutrition value of beans, but the majority did not agree or disagreed with statements about bean health benefits. Greater efforts to educate low-income women about bean health benefits may increase consumption and improve nutrition.

  6. Decolorization of reactive brilliant red K-2BP by white rot fungus under sterile and non-sterile conditions

    Institute of Scientific and Technical Information of China (English)

    GAO Da-wen; WEN Xiang-hua; QIAN Yi

    2006-01-01

    Almost all the studies both domestic and international using white rot fungus for dye wastewater treatment are performed under sterile conditions. However, it is obviously unpractical that wastewater with dyes is treated under sterile conditions. A feasible study was made for using white rot fungus Phanerochaete chrysosporium to degrade reactive brilliant red K-2BP dye under non-sterile conditions. The results showed that there was no decolorizing effect under non-sterile condition if white rot fungus was incubated under non-sterile condition, and the decolorization was always near to 0% during decolorizing test for 3 d; in the meantime, a lot of yeast funguses were found in liquid medium when white rot fungus was incubated under non-sterile conditions; however, if white rot fungus was incubated under sterile condition firstly, its decolorization was above 90% under non-sterile condition, which was similar to that of sterile condition. So we point out that the treating process for wastewater with dyes should be divided into two stages. The first stage is that white rot fungus should be incubated under sterile conditions, and the second stage is that reactive brilliant red K-2BP is decolorized under non-sterile conditions. The method not only save the operation cost which decolorizing reactive brilliant red K-2BP under sterile condition, but also provide the feasibility for using white rot fungus to degrade wastewater with dyes under non-sterile conditions.

  7. Virus-induced gene silencing in soybean and common bean.

    Science.gov (United States)

    Zhang, Chunquan; Whitham, Steven A; Hill, John H

    2013-01-01

    Plant viral vectors are useful for transient gene expression as well as for downregulation of gene expression via virus-induced gene silencing (VIGS). When used in reverse genetics approaches, VIGS offers a convenient way of transforming genomic information into knowledge of gene function. Efforts to develop and improve plant viral vectors have expanded their applications and have led to substantial advances needed to facilitate gene function studies in major row crops. Here, we describe a DNA-based Bean pod mottle virus (BPMV) vector system for both gene expression and VIGS in soybean and common bean.

  8. Locust bean gum: Exploring its potential for biopharmaceutical applications.

    Science.gov (United States)

    Dionísio, Marita; Grenha, Ana

    2012-07-01

    Polysaccharides have been finding, in the last decades, very interesting and useful applications in the biomedical and, specifically, in the biopharmaceutical field. Locust bean gum is a polysaccharide belonging to the group of galactomannans, being extracted from the seeds of the carob tree (Ceratonia siliqua). This polymer displays a number of appealing characteristics for biopharmaceutical applications, among which its high gelling capacity should be highlighted. In this review, we describe critical aspects of locust bean gum, contributing for its role in biopharmaceutical applications. Physicochemical properties, as well as strong and effective synergies with other biomaterials are described. The potential for in vivo biodegradation is explored and the specific biopharmaceutical applications are discussed.

  9. Polycyclic aromatic hydrocarbon degradation by the white rot fungus Bjerkandera sp. strain BOS55.

    NARCIS (Netherlands)

    Kotterman, M.J.J.

    1998-01-01

    Outline of this thesisIn this thesis the conditions for optimal PAH oxidation by the white rot fungus Bjerkandera sp. strain BOS55 were evaluated. In Chapter 2, culture conditions like aeration and cosubstrate concentrations, which influenced the oxidation of the PAH compound anthra

  10. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium (1988)

    Science.gov (United States)

    Extensive biodegradation of pentachlorophenol (PCP) by the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance and mineralization of [14C]PCP in nutrient nitrogen-limited culture. Mass balance analyses demonstrated the formation of water-soluble met...

  11. Mechanisms of qualitative and quantitative resistance to Aphanomyces root rot in alfalfa

    Science.gov (United States)

    Aphanomyces root rot (ARR), caused by Aphanomyces euteiches, is one of the most important diseases of alfalfa (Medicago sativa) in the United States. Two races of the pathogen are currently recognized. Most modern alfalfa cultivars have high levels of resistance to race 1 but few cultivars have resi...

  12. Pythium and Fusarium species causing seed rot and damping-off of alfalfa

    Science.gov (United States)

    Seed rot and damping-off is an important disease of alfalfa, severely affecting stand establishment when conditions favor the disease. This disease may have been overlooked as a cause of poor stand establishment and reduced vigor of adult plants. Globally, 15 Pythium species have been found to cause...

  13. Combining fuzzy set theory and nonlinear stretching enhancement for unsupervised classification of cotton root rot

    Science.gov (United States)

    Cotton root rot is a destructive disease affecting cotton production. Accurate identification of infected areas within fields is useful for cost-effective control of the disease. The uncertainties caused by various infection stages and newly infected plants make it difficult to achieve accurate clas...

  14. Controlled release fungicide, soil amendments and biofumigation effects on cotton root rot suppression

    Science.gov (United States)

    The cotton root rot pathogen (Phymatotrichopsis ominora) causes major losses in cotton produced in the Southwest. Granular controlled release formulations (CRF) of the fungicide, Propiconazole, developed to be soil applied at planting were studied at 1.0 and 3.0 lb a.i./ac. applications and with tw...

  15. A postharvest fruit rot of apple caused by Lambertella sp. in Washington state

    Science.gov (United States)

    During surveys for postharvest diseases of apples in 2003-05, a fruit rot disease was observed on stored apples collected from packinghouses. The disease appeared to originate from infections of wounds on the fruit, and lesions were brown and decayed tissues were spongy. Lambertella sp. was consiste...

  16. Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco.

    Science.gov (United States)

    Almario, Juliana; Muller, Daniel; Défago, Geneviève; Moënne-Loccoz, Yvan

    2014-07-01

    Soil suppressiveness to disease is an intriguing emerging property in agroecosystems, with important implications because it enables significant protection of susceptible plants from soil-borne pathogens. Unlike many soils where disease suppressiveness requires crop monoculture to establish, certain soils are naturally suppressive to disease, and this type of specific disease suppressiveness is maintained despite crop rotation. Soils naturally suppressive to Thielaviopsis basicola-mediated black root rot of tobacco and other crops occur in Morens region (Switzerland) and have been studied for over 30 years. In Morens, vermiculite-rich suppressive soils formed on morainic deposits while illite-rich conducive soils developed on sandstone, but suppressiveness is of microbial origin. Antagonistic pseudomonads play a role in black root rot suppressiveness, including Pseudomonas protegens (formerly P. fluorescens) CHA0, a major model strain for research. However, other types of rhizobacterial taxa may differ in prevalence between suppressive and conducive soils, suggesting that the microbial basis of black root rot suppressiveness could be far more complex than solely a Pseudomonas property. This first review on black root rot suppressive soils covers early findings on these soils, the significance of recent results, and compares them with other types of suppressive soils in terms of rhizosphere ecology and plant protection mechanisms.

  17. Indirect selection for resistance to ear rot and leaf diseases in maize lines using biplots.

    Science.gov (United States)

    Pereira, G S; Camargos, R B; Balestre, M; Von Pinho, R G; C Melo, W M

    2015-09-21

    Leaf disease and ear rot have caused reductions in maize yield in Brazil and other producer countries. Therefore, the aims of this study were to analyze the association between husked ear yield and the severity of maize white spot, gray leaf spot, helminthosporium, and ear rot caused by Fusarium verticillioides and Diplodia maydis using biplots in a mixed-model approach. The responses of 238 lines introduced to Brazil and four controls were evaluated using an incomplete block design with three replicates in two locations: Lavras and Uberlândia, Minas Gerais, Brazil. Two experiments were conducted in each location, one with F. verticillioides and the other with D. maydis. The mixed models elucidated the relationship between yield, leaf disease, and ear disease. Significant genotype x environment and genotype x pathogen interactions were observed. In conclusion, husked ear yield is more associated with ear rot than with the leaf diseases evaluated, justifying the indirect selection for resistance to kernel rot in maize-F. verticillioides and maize-D. maydis pathosystems by yield evaluation.

  18. Management of Phytophthora cinnamomi root rot disease of blueberry with gypsum and compost

    Science.gov (United States)

    Root rot disease of blueberry caused by Phytophthora cinnamomi is becoming more prevalent as a consequence of widespread adoption of drip irrigation. This creates higher moisture content in the root zone more conducive for the pathogen. Options for disease control under organic management are limi...

  19. Foliar application of β-D-glucan nanoparticles to control rhizome rot disease of turmeric.

    Science.gov (United States)

    Anusuya, Sathiyanarayanan; Sathiyabama, Muthukrishnan

    2015-01-01

    The soilborne Oomycete Pythium aphanidermatum is the causal agent of rhizome rot disease, one of the most serious threats to turmeric crops. At present, effective fungicides are not available. Researches on nanoparticles in a number of crops have evidenced the positive changes in gene expression indicating their potential use in crop improvement. Hence, experiments were carried out to determine the effect of β-D-glucan nanoparticles (nanobiopolymer) in protection of turmeric plants against rot disease by the way of products that reinforce plant's own defense mechanism. Foliar spray of β-D-glucan nanoparticles (0.1%, w/v) elicited marked increase in the activity of defense enzymes such as peroxidases (E.C.1.11.1.7), polyphenol oxidases (E.C.1.14.18.1), protease inhibitors (E.C.3.4.21.1) and β-1,3-glucanases (E.C.3.2.1.39) at various age levels. Constitutive and induced isoforms of these enzymes were investigated during this time-course study. β-D-glucan nanoparticles (GNPs) significantly reduced the rot incidence offering 77% protection. Increased activities of defense enzymes in GNPs-applied turmeric plants may play a role in restricting the development of disease symptoms. These results demonstrated that GNPs could be used as an effective resistance activator in turmeric for control of rhizome rot disease.

  20. Status of maize stalk rot complex in western belts of Nepal and its integrated management

    Directory of Open Access Journals (Sweden)

    Subash Subedi

    2016-12-01

    Full Text Available Maize stalk rot complex is becoming a serious threat for maize growing areas of Nepal. A field monitoring for maize stalk rot complex was done during crop season (August, 2016 covering 10 farmers field each of Surkhet, Banke, Dang, Chitwan and Nawalparasi districts. Maize crop showed highly susceptible reaction to the disease at western belts of Dang and susceptible reaction was marked in Chitwan and Nawalparasi districts while the disease effect was mild at Banke and Surkhet district. Most of the plant diseases managed successfully through the application of bio-control agents, host resistance, chemicals and other different cultural control methods. The result of field experiment conducted at Dang showed that all the treatments had significant (P≤0.05 effect on percent disease index (PDI and crop yield over farmers practice to control maize stalk rot. The higher percent disease control (52.36% and yield increase (40.29% were recorded from the plot sprayed with streptocyclin @ 2 g L-1 and insecticide (cypermethrin + chloropyrifos @ 2.5 ml L-1 of water during knee height and subsequent spray after 15 days interval as compared to farmers practice. Out of 30 genotypes, Rampur composit, Arun 2, Rampur 34, RamS03F08, TLBRS07F16 and Rampur 24 were found resistant against stalk rot complex with higher yield at Rampur Chitwan.

  1. Diversity and biological control of Sclerotium rolfsii, causal agent of stem rot of groundnut

    NARCIS (Netherlands)

    Lê, N.C.

    2011-01-01

    Groundnut (Arachis hypogaea L.) is an economically important legume crop in Vietnam and many other countries worldwide. Stem rot disease, caused by the soil-borne fungus Sclerotium rolfsii Sacc., is a major yield limiting factor in groundnut cultivation. Current control methods

  2. Diallel analysis of resistance to fusarium ear rot and fumonisin contamination in maize

    Science.gov (United States)

    The fungus Fusarium verticillioides infects maize ears and kernels, resulting in Fusarium ear rot disease, reduced grain yields, and contamination of grain with the mycotoxin fumonisin. Typical hybrid maize breeding programs involve selection for both favorable inbred and hybrid performance, and the...

  3. Loop-mediated isothermal amplification (LAMP) based detection of Colletotrichum falcatum causing red rot in sugarcane

    Science.gov (United States)

    Red rot, caused by Colletotrichum falcatum, is a destructive disease prevalent in most sugarcane-producing countries. Disease-free sugarcane planting materials are essential as the pathogen spreads primarily through infected setts. The present study was undertaken to develop loop-mediated isothermal...

  4. Root rot of peas in the Netherlands: fungal pathogens, inoculum potential and soil receptivity.

    NARCIS (Netherlands)

    Oyarzun, P.J.

    1994-01-01

    Fungi associated to pea (Pisum sativum L.) root rot were studied. Fusarium and Oomycetes were most common. Fusarium solani f. sp. pisi, Fsp, was widely distributed and the most frequent fungus in roots of diseased crops. The pathogens Thielaviopsis basicola , Tb, and Aphanomyces euteiches, Ae, wer

  5. Control of potato soft rot caused by Pectobacterium carotovorum and Pectobacterium atrosepticum by Moroccan actinobacteria isolates.

    Science.gov (United States)

    Baz, M; Lahbabi, D; Samri, S; Val, F; Hamelin, G; Madore, I; Bouarab, K; Beaulieu, C; Ennaji, M M; Barakate, Mustapha

    2012-01-01

    Pectobacterium carotovorum and Pectobacterium atrosepticum are dreadful causal agents of potato soft rot. Actually, there are no efficient bactericides used to protect potato against Pectobacterium spp. Biological control using actinobacteria could be an interesting approach to manage this disease. Thus, two hundred actinobacteria isolated from Moroccan habitats were tested for their ability to inhibit in vitro 4 environmental Pectobacterium strains and the two reference strains (P. carotovorum CFBP 5890 and P. atrosepticum CFBP 5889). Eight percent of these isolates were active against at least one of the tested pathogens and only 2% exhibited an antimicrobial activity against all tested Pectobacterium strains. Four bioactive isolates having the greatest pathogen inhibitory capabilities and classified as belonging to the genus Streptomyces species through 16S rDNA analysis were subsequently tested for their ability to reduce in vivo soft rot symptoms on potato slices of Bintje, Yukon Gold, Russet and Norland cultivars caused by the two pathogens P. carotovorum and P. atrosepticum. This test was carried out by using biomass inoculums and culture filtrate of the isolates as treatment. Among these, strain Streptomyces sp. OE7, reduced by 65-94% symptom severity caused by the two pathogens on potato slices. Streptomyces OE7 showed a potential for controlling soft rot on potato slices and could be useful in an integrated control program against potato soft rot pathogens in the objective to reduce treatments with chemical compounds.

  6. Armillaria root rot of tea in Kenya. Characterization of the pathogen and approaches to disease management

    NARCIS (Netherlands)

    Otieno, W.

    2002-01-01

    The rare occurrence of basidiomata and rhizomorphs constrains diagnosis of Armillaria root rot and identification of Armillaria species in Africa. This has had a negative impact on taxonomic research on the genus Armillaria in the continent, where the existence of various genetic groups of the fungu

  7. First report of frosty pod rot caused by Moniliophthora roreri on cacao in Bolivia

    Science.gov (United States)

    Frosty pod rot (FPR) is a devastating cacao disease caused by the basidiomycete Moniliophthora roreri (Aime and Phillips-Mora, 2005). The disease is confined to 13 countries in Central and South America and constitutes a permanent threat for cacao cultivation worldwide. In July 2012, FPR was detect...

  8. Phytophthora megakarya, a causal agent of black pod rot in Africa

    Science.gov (United States)

    In most parts of the world where Theobroma cacao is grown, Phytophthora palmivora is the major concern for causing black pod rot (BPR). Phytophthora megakarya, on the other hand, occurs only in Africa, but represents a major threat to cacao production, the countries of West Africa being the largest ...

  9. Influence of fruit age on Phytophthora fruit rot development on susceptible and resistant watermelon germplasm

    Science.gov (United States)

    Phytophthora fruit rot of watermelon caused by Phytophthora capsici is an emerging disease in the southeastern United States. The disease has resulted in severe losses to watermelon growers in GA, SC, and NC, and is considered a top-research priority by the National Watermelon Association. We releas...

  10. Podridão do pimentão Black rot of green pepper fruits

    Directory of Open Access Journals (Sweden)

    A. P. Viégas

    1962-01-01

    Full Text Available Podridão do pimentão ainda verde, causada por Diaporthe phaseolorum, foi observada no Brasil, ao que parece, pela primeira vez.Black rot green fruits of Capsicum annuum L. caused by Diaporthe phaseolorum is reported for Brasil for the first time.

  11. POTATO RING ROT PATHOGEN DETECTION BY POLYMERASE CHAIN REACTION IN POTATO TUBERS

    Directory of Open Access Journals (Sweden)

    Shafikova T.N.

    2008-10-01

    Full Text Available Bacterial ring rot caused by Clavibacter michiganensis ssp. sepedonicus is a widespread disease of potato resulting in significant economic lost in agriculture and seed growing. A latent form of this infection makes difficulties for diagnostics and facilitates the quick disease propagation. Polymerase chain reaction is the best method for the disease control.

  12. Biological pretreatment of corn stover with white-rot fungus for improved enzymatic hydrolysis

    Science.gov (United States)

    Biological pretreatment of lignocellulosic biomass by white-rot fungus can represent a low-cost and eco-friendly alternative to harsh physical, chemical or physico-chemical pretreatment methods to facilitate enzymatic hydrolysis. However, fungal pretreatment can cause carbohydrate loss and it is, th...

  13. Efficacy of management tools for control of Pythium root rot of Douglas-fir seedlings, 2013

    Science.gov (United States)

    This study was conducted as part of the IR-4 Ornamental Horticulture program to evaluate fungicides and biopesticides for management of root, crown and stem rots of ornamental plants caused by Pythium species. Pythium species used in this study were P. vipa (isolate 09), P. dissotocum (isolate 41-08...

  14. Mechanism of antibacterial activity of the white-rot fungus Hypholoma fasciculare colonizing wood

    NARCIS (Netherlands)

    De Boer, W.; Folman, L.B.; Klein Gunnewiek, P.J.A.; Svensson, T.; Bastviken, D.; Oberg, G.; Del Rio, J.C.; Boddy, L.

    2010-01-01

    In a previous study it was shown that the number of wood-inhabiting bacteria was drastically reduced after colonization of beech (Fagus sylvatica) wood blocks by the white-rot fungus Hypholoma fasciculare, or sulfur tuft (Folman et al. 2008). Here we report on the mechanisms of this fungal-induced a

  15. Characterization of Basidiomycetes associated with wood rot of citrus in southern Italy.

    Science.gov (United States)

    Roccotelli, Angela; Schena, Leonardo; Sanzani, Simona M; Cacciola, Santa O; Mosca, Saveria; Faedda, Roberto; Ippolito, Antonio; di San Lio, Gaetano Magnano

    2014-08-01

    The characterization of Basidiomycetes associated with wood rots in commercial citrus orchards in southern Italy revealed that both white and brown rot fungi are implicated in this disease. Fomitiporia mediterranea was the most prevalent species causing a white rot, followed by Fomitopsis sp. which, by contrast, was associated with brown rot wood decay. Furthermore, Phellinus spp. and other nonidentified basidiomycetous fungi showing genetic affinity with the genera Phellinus and Coniophora were occasionally isolated. Artificial inoculations on lemon (Citrus limon) branches showed a faster wood colonization by Fomitopsis sp. compared with F. mediterranea, indicating that the former species as a potentially serious pathogen of citrus trees. The analysis of F. mediterranea internal transcribed spacer (ITS) sequences revealed a high level of genetic variability, with 13 genotypes which were both homozygous (6 genotypes) and heterozygous (7 genotypes). The presence of heterozygous genomes based on ITS sequences has never been reported before for F. mediterranea. This, together with the high frequency of basidiomata on infected wood, unambiguously confirms the outcrossing nature of reproduction in F. mediterranea and the primary role of basidiospores in the dissemination of inoculum. Similarly, high genetic variability was observed analyzing Fomitopsis sp. Because basidiomata of this fungus have not been observed on citrus trees, it can be hypothesized that basidiospores are produced on alternative host plants.

  16. Improving ruminal degradability of oil palm fronds using white rot fungi

    NARCIS (Netherlands)

    Rahman, M.M.; Lourenco, M.; Hassim, H.A.; Baars, J.J.P.; Sonnenberg, A.S.M.; Cone, J.W.; Boever, de J.L.; Fievez, V.

    2011-01-01

    The use of oil palm fronds (OPF) in livestock production is limited as up to 0.20 of their dry biomass is lignin. White rot fungi (WRF) are very effective basidiomycetes for biological pre-treatment as they degrade lignin extensively. Ten WRF were screened for their potential to increase OPF digesti

  17. Modification of wheat straw lignin by solid state fermentation with white-rot fungi

    NARCIS (Netherlands)

    Dinis, M.J.; Bezerra, R.M.F.; Nunes, F.; Dias, A.A.; Guedes, C.; Ferreira, L.M.M.; Cone, J.W.; Marques, G.S.M.; Barros, A.R.N.; Rodrigues, M.A.M.

    2009-01-01

    The potential of crude enzyme extracts, obtained from solid state cultivation of four white-rot fungi (Trametes versicolor, Bjerkandera adusta, Ganoderma applanatum and Phlebia rufa), was exploited to modify wheat straw cell wall. At different fermentation times, manganese-dependent peroxidase (MnP)

  18. Stenotrophomonas maltophilia: a new potential biocontrol agent of Ralstonia solanacearum, causal agent of potato brown rot

    NARCIS (Netherlands)

    Messiha, N.A.S.; Diepeningen, van A.D.; Farag, N.S.; Abdallah, S.A.; Janse, J.D.; Bruggen, van A.H.C.

    2007-01-01

    Stenotrophomonas maltophilia was isolated from the rhizosphere of eggplant in the Nile Delta of Egypt, and its antagonistic potential against Ralstonia solanacearum race 3 biovar 2, the causal agent of potato brown rot, was in vitro evaluated on KB agar medium and in vivo on potato plants. In vitro,

  19. Potato brown rot incidence and severity under different management and amendment regimes in different soil types

    NARCIS (Netherlands)

    Messiha, N.A.S.; Bruggen, van A.H.C.; Diepeningen, van A.D.; Vos, de O.J.; Termorshuizen, A.J.; Tjou-Tam-Sin, N.N.A.; Janse, J.D.

    2007-01-01

    Ralstonia solanacearum race 3 biovar 2, the causative agent of potato brown rot (bacterial wilt), is an economically important disease in tropical, subtropical and temperate regions of the world. In view of previous reports on suppression of the disease by organic amendments, and the expansion of or

  20. Fruit age and development of Phytophthora fruit rot on resistant and susceptible watermelon lines

    Science.gov (United States)

    Phytophthora fruit rot caused by Phytophthora capsici is an emerging disease in most watermelon producing regions of Southeast U.S. and has resulted in severe losses to watermelon growers especially in GA, SC, and NC. We recently released four germplasm lines (USVL203-PFR, USVL020-PFR, USVL782-PFR,...

  1. Evaluation of watermelon varieties for tolerance to powdery mildew and Phytophthora fruit rot, 2014

    Science.gov (United States)

    This experiment was conducted at the U.S. Vegetable Laboratory farm in Charleston, SC. The soil was Yonges loamy fine sand. This study was undertaken to determine the performance of seeded and seedless commercial watermelon varieties for tolerance to powdery mildew (PM) and Phytophthora fruit rot as...

  2. Cylindrocarpon root rot: multi-gene analysis reveals novel species within the Ilyonectria radicicola species complex

    NARCIS (Netherlands)

    Cabral, A.; Groenewald, J.Z.; Rego, C.; Oliveira, H.; Crous, P.W.

    2012-01-01

    Ilyonectria radicicola and its Cylindrocarpon-like anamorph represent a species complex that is commonly associated with root rot disease symptoms on a range of hosts. During the course of this study, several species could be distinguished from I. radicicola sensu stricto based on morphological and

  3. First report of truncatella angustata causing postharvest rot on ‘topaz’ apples in the Netherlands

    NARCIS (Netherlands)

    Wenneker, M.; Pham, K.T.K.; Boekhoudt, L.C.; Boer, de F.A.; Leeuwen, van P.J.; Hollinger, T.C.; Thomma, B.P.H.J.

    2017-01-01

    In the Netherlands, about 30% of the organic apple (Malus domestica Borkh.) production consists of apple scab resistant cultivars, such as Topaz and Santana. However, organic ‘Topaz’ apples show a high incidence of fungal rot after storage. Hot-water treatment (HWT) of freshly harvested apple fru

  4. Rhizoctonia root rot resistance in experimental sugar beet cultivars in Twin Falls County, ID, 2012

    Science.gov (United States)

    Rhizoctonia root rot continues to be a concerning problem in sugar beet production areas. To investigate resistance to this disease in 26 experimental sugar beet cultivars, field studies were conducted with three Rhizoctonia solani AG-2-2 IIIB strains. Based on means for the 26 cultivars, surface ...

  5. Rhizoctonia root rot resistance in commercial sugar beet cultivars in Twin Falls County, ID, 2012

    Science.gov (United States)

    Rhizoctonia root rot continues to be a concerning problem in sugar beet production areas. To investigate resistance to this disease in 26 commercial sugar beet cultivars, field studies were conducted with three Rhizoctonia solani AG-2-2 IIIB strains. Based on means for the 26 cultivars, surface ro...

  6. Agrobacterium-mediated transformation of the white-rot fungus Physisporinus vitreus.

    Science.gov (United States)

    Schubert, M; Stührk, C; Fuhr, M J; Schwarze, F W M R

    2013-11-01

    The biotechnologically important white-rot fungus Physisporinus vitreus was co-cultivated with Agrobacterium tumefaciens AGL-1 carrying plasmids with nourseothricin resistance as the selectable marker gene and red fluorescence protein as a visual marker. Mitotically stable transformed isolates were obtained showing red fluorescence protein activity.

  7. Incidence and Severity of Maize Ear Rots and Factors Responsible for Their Occurrence in Uganda

    Science.gov (United States)

    Bigirwa, G.; Kaaya, A. N.; Sseruwu, G.; Adipala, E.; Okanya, S.

    Eleven major maize growing districts of Uganda were surveyed for three consecutive seasons between 2002 and 2003 to establish maize ear rot incidence and severity. Sternocarpella maydis and Fusarium species particularly F. graminearum and F. verticillioides were the identified maize ear rot causing fungi. Incidence of S. maydis ranged from 2.5 to 32.5% while that of Fusarium sp. was in the range of 1.9 and 15.3%. In districts of higher altitude (above 1,800 m above sea level) F. graminearum dominated in all seasons while in districts with an altitude between 900 and 1,500 m above sea level, S. maydis was the major cause of ear rots. This observation was attributed to differences in temperature, altitude and rainfall. There was a strong positive correlation (p = 0.001) between incidence and severity for S. maydis and a weak one for Fusarium sp. because the latter would rarely infect the entire cob unlike the former. All farmers expressed concern about the quality of maize due to ear rots and sort out infected grain after harvest. However, varied uses of infected grain were noted. For example, in Kapchorwa district 82% of the respondents indicated that the infected grain is used for making local brew because the moulds give it a good taste and aroma, while in Kamuli and Masaka districts, 36% use it as animal feed ingredient. This indicates that people and animals could be ingesting mycotoxins unknowingly thus the need for sensitization programmes.

  8. Differences in the Responses to Iron Deficiency Stress between Bean and Maize

    OpenAIRE

    米谷, 力; 森次, 益三; 河﨑, 利夫

    1995-01-01

    The responses to iron deficiency stress in bean and maize were compared. The susceptibility to iron deficiency stress was smaller in bean than in maize;i.e., the tolerance to iron deficiency was greater in bean than in maize. The roots of the bean plants exposed to iron deficiency stress, developed iron reducing capacity and medium-pH lowering capacity,but not the roots of maize. The iron reducing capacity and medium-pH lowering capacity of the bean roots were inhibited by a shadowing, detopp...

  9. Measuring Prevention More Broadly, An Empirical...

    Data.gov (United States)

    U.S. Department of Health & Human Services — Measuring Prevention More Broadly, An Empirical Assessment of CHIPRA Core Measures Differences in CHIP design and structure, across states and over time, may limit...

  10. Decolorization of reactive brilliant red K-2BP with the white- rot fungi under non-sterile conditions

    Institute of Scientific and Technical Information of China (English)

    GAO Dawen; WEN Xianghua; QIAN Yi

    2004-01-01

    @@ In recent years, many researches indicate that white rot fungus is a promising microbe in wastewater treatment. The basidiomycete Phanerochaete chrysosporium in white rot fungi is the most extensively studied and discussed[1]. The extracellular ligninolytic enzymes of white rot fungi have the ability to degrade a wide spectrum of recalcitrant organo-pollutants such as chlorinated phenols and various types of synthetic dyes because of their nonspecific characteristics[2-6]. And some significant mineralization (20%-48%) was observed during degradation of azo dyes[7].

  11. ISOLATION AND IDENTIFICATION OF BACTERIAL CAUSED SOFT ROT DISEASE ON CARROT (Daucus carota L.) LOCAL VARIETY IN BALI

    OpenAIRE

    Ni Wayan Desi Bintari; Retno Kawuri; Meitini Wahyuni Proborini

    2015-01-01

    Soft rot bacteria infection in carrot tuber (D. carota L.) causes severe economic losses. Soft rot disease can be caused by various bacteria belonging to Enterobacteriaceae. This study aimed to isolate and identify bacteria as causal agent of soft rot disease in local carrot variety in Bali. Samples were collected at Badung Tradisional Market, Denpasar, Bali. Isolation was carried out by serial dilution method (Platting Method). Eight bacteria (BL1, BL2, BL3, BL4, BL5, BL6, BL7 and BL8) were ...

  12. Susceptibility of Maize to Stalk Rot Caused by Fusarium graminearum Deoxynivalenol and Zearalenone Mutants.

    Science.gov (United States)

    Quesada-Ocampo, L M; Al-Haddad, J; Scruggs, A C; Buell, C R; Trail, F

    2016-08-01

    Fusarium graminearum is a destructive pathogen of cereals that can cause stalk rot in maize. Stalk rot results in yield losses due to impaired grain filling, premature senescence, and lodging, which limits production and harvesting of ears. In addition, mycotoxins can make infected tissues unfit for silage. Our objectives were to evaluate the natural variation in stalk rot resistance among maize inbreds, to establish whether deoxynivalenol (DON)- and zearalenone (ZEA)-deficient strains are pathogenic on a panel of diverse inbreds, and to quantify the accumulation of DON in infected stalk tissue. Wild-type F. graminearum and mycotoxin mutants (DON and ZEA) were used to separately inoculate stalks of 9-week-old plants of 20 inbreds in the greenhouse. Plants were evaluated for lesion area at the inoculation point at 0, 2, 14, and 28 days postinoculation and tissues around lesions were sampled to determine the DON content. Regardless of their ability to produce DON or ZEA, all tested F. graminearum strains caused stalk rot; however, significant differences in disease levels were detected. Among the tested inbreds, Mp717 was resistant to all three F. graminearum strains while Mp317 and HP301 were only partially resistant. Accumulation of DON was significantly lower in infected stalks of the resistant and partially resistant inbreds than the susceptible inbreds. Analysis of the 20 inbreds using data from 17 simple-sequence repeats revealed population structure among the individuals; however, there was no association between genetic clustering and stalk rot resistance. These findings are an additional step toward breeding maize inbreds suitable for planting in fields infested with F. graminearum.

  13. Scholarly context not found: one in five articles suffers from reference rot.

    Directory of Open Access Journals (Sweden)

    Martin Klein

    Full Text Available The emergence of the web has fundamentally affected most aspects of information communication, including scholarly communication. The immediacy that characterizes publishing information to the web, as well as accessing it, allows for a dramatic increase in the speed of dissemination of scholarly knowledge. But, the transition from a paper-based to a web-based scholarly communication system also poses challenges. In this paper, we focus on reference rot, the combination of link rot and content drift to which references to web resources included in Science, Technology, and Medicine (STM articles are subject. We investigate the extent to which reference rot impacts the ability to revisit the web context that surrounds STM articles some time after their publication. We do so on the basis of a vast collection of articles from three corpora that span publication years 1997 to 2012. For over one million references to web resources extracted from over 3.5 million articles, we determine whether the HTTP URI is still responsive on the live web and whether web archives contain an archived snapshot representative of the state the referenced resource had at the time it was referenced. We observe that the fraction of articles containing references to web resources is growing steadily over time. We find one out of five STM articles suffering from reference rot, meaning it is impossible to revisit the web context that surrounds them some time after their publication. When only considering STM articles that contain references to web resources, this fraction increases to seven out of ten. We suggest that, in order to safeguard the long-term integrity of the web-based scholarly record, robust solutions to combat the reference rot problem are required. In conclusion, we provide a brief insight into the directions that are explored with this regard in the context of the Hiberlink project.

  14. Biofortified red mottled beans (Phaseolus vulgaris L. in a maize and bean diet provide more bioavailable iron than standard red mottled beans: Studies in poultry (Gallus gallus and an in vitro digestion/Caco-2 model

    Directory of Open Access Journals (Sweden)

    Glahn Raymond P

    2011-10-01

    Full Text Available Abstract Background Our objective was to compare the capacities of biofortified and standard colored beans to deliver iron (Fe for hemoglobin synthesis. Two isolines of large-seeded, red mottled Andean beans (Phaseolus vulgaris L., one standard ("Low Fe" and the other biofortified ("High Fe" in Fe (49 and 71 μg Fe/g, respectively were used. This commercial class of red mottled beans is the preferred varietal type for most of the Caribbean and Eastern and Southern Africa where almost three quarters of a million hectares are grown. Therefore it is important to know the affect of biofortification of these beans on diets that simulate human feeding studies. Methods Maize-based diets containing the beans were formulated to meet the nutrient requirements for broiler except for Fe (Fe concentrations in the 2 diets were 42.9 ± 1.2 and 54.6 ± 0.9 mg/kg. One day old chicks (Gallus gallus were allocated to the experimental diets (n = 12. For 4 wk, hemoglobin, feed-consumption and body-weights were measured. Results Hemoglobin maintenance efficiencies (HME (means ± SEM were different between groups on days 14 and 21 of the experiment (P In-vitro analysis showed lower iron bioavailability in cells exposed to standard ("Low Fe" bean based diet. Conclusions We conclude that the in-vivo results support the in-vitro observations; biofortified colored beans contain more bioavailable-iron than standard colored beans. In addition, biofortified beans seems to be a promising vehicle for increasing intakes of bioavailable Fe in human populations that consume these beans as a dietary staple. This justifies further work on the large-seeded Andean beans which are the staple of a large-region of Africa where iron-deficiency anemia is a primary cause of infant death and poor health status.

  15. Pinto Beans (Phaseolus vulgaris L. as a Functional Food: Implications on Human Health

    Directory of Open Access Journals (Sweden)

    Vicki Schlegel

    2013-02-01

    Full Text Available Most foods are considered functional in terms of providing nutrients and energy to sustain daily life, but dietary systems that are capable of preventing or remediating a stressed or diseased state are classified as functional foods. Dry beans (Phaseolus vulgaris L. contain high levels of chemically diverse components (phenols, resistance starch, vitamins, fructooligosaccharides that have shown to protect against such conditions as oxidative stress, cardiovascular disease, diabetes, metabolic syndrome, and many types of cancer, thereby positioning this legume as an excellent functional food. Moreover, the United States has a rich dry bean history and is currently a top producer of dry beans in the world with pinto beans accounting for the vast majority. Despite these attributes, dry bean consumption in the US remains relatively low. Therefore, the objective of this manuscript is to review dry beans as an important US agricultural crop and as functional food for the present age with an emphasis on pinto beans.

  16. Physicochemical properties and antioxidant capacity of raw, roasted and puffed cacao beans.

    Science.gov (United States)

    Hu, SuJung; Kim, Byung-Yong; Baik, Moo-Yeol

    2016-03-01

    The antioxidant capacity and attributable bioactive compounds of puffed cacao beans were investigated. Roasting was carried out at 190°C for 15min and puffing was performed at 4-7kgf/cm(2). Cacao beans puffed at 4kgf/cm(2) showed the highest total polyphenols (23.16mgGAE/gsample) and total flavonoids (10.65mgCE/gsample) (pcacao beans reflected the total polyphenols and flavonoids measured. The quantities of theobromine, catechin, epicatechin, and procyanidin B2 were higher in cacao beans puffed at 4kgf/cm(2) than in roasted cacao beans. Puffed cacao beans received a good sensory score in flavor, but sourness increased as puffing pressure increased. Thus, these results suggest that, in cacao bean processing, puffing could be an alternative to roasting, which provide a rich taste and high antioxidant capacity.

  17. Utilization of half-embryo test to identify irradiated beans

    Energy Technology Data Exchange (ETDEWEB)

    Villavicencio, Anna Lucia C.H. [Instituto de Pesquisas Energeticas e Nucleares (IPEN), Sao Paulo, SP (Brazil); Mancini-Filho, Jorge [Sao Paulo Univ., SP (Brazil). Faculdade de Ciencias Farmaceuticas; Delincee, Henry [Federal Research Centre for Nutrition - BFE, Karlsruhe (Germany)

    1996-07-01

    Germination tests were carried out in irradiated and non-irradiated bean seeds which allow to observe characteristically variations on the shoots and roots. The methodology used in this work, is based upon biological changes which occur in two Brazilian beans, Phaseolus vulgaris L., var. carioca and Vigna unguiculata (L.) Walp, var. macacar, irradiated in a {sup 60} Co source, with doses of 0,0.5, 1.0, 2.5, 5.0 and 10.0 kGy. The shoots and roots were observed during 3 days of culturing period under specified conditions. The differences observed in these two varieties were analysed immediately after irradiation and after 6 months of storage period at room temperature. Irradiated half-embryos showed markedly reduced root grow and almost totally retarded shoot elongation. Differences between irradiated and nonirradiated half-embryo could be observed after irradiation when different beans and storage time were varied. The shoots of half-embryos irradiated with more than 2.5 kGy did not undergo any elongation, whereas, the shoots of non-irradiated or those beans irradiated under 1.0 kGy elongated significantly within the 3 day test period. (author)

  18. Weed Interference Affects Dry Bean Yield and Growth

    Directory of Open Access Journals (Sweden)

    Hossein GHAMARI

    2012-08-01

    Full Text Available Dry bean is one of the most important pulse crops in Iran. Field study was conducted in 2011 to evaluate effects of weed competition from a natural flora on growth and yield of dry bean (Phaseolus vulgaris L.. The treatments consisted of weed infestation and weed removal periods (10, 20, 30, 40 and 50 days after crop emergence. Control plots kept weed-infested and weed-free throughout growing season. To assess the weed competition effect on crop characteristics, Richards, Gompertz and logistic equations were fitted to the data. The most abundant weed species were Chenopodium album and Amaranthus retroflexus. Increase in duration of weed interference decreased the stem height of dry bean. At the end of the growing season, dry bean was 20 cm taller in season-long weed-free treatment compared to the season-long weed-infested treatment. As the number of days of weed interference increased, a declining trend of LAI and number of pods was observed. The minimum number of pods was obtained in season-long weed-infested treatment (5.01 pods/plant. Weed interference during the whole growing season, caused a 60% reduction in yield. Considering 5% and 10% acceptable yield lost, the critical period of weed competition was determined from 20 to 68 and 23 to 55 days after planting (DAE, respectively.

  19. Structural features of acelated galactomannans from green Coffea arabica Beans

    NARCIS (Netherlands)

    Oosterveld, A.; Coenen, G.J.; Vermeulen, N.C.B.; Voragen, A.G.J.; Schols, H.A.

    2004-01-01

    Polysaccharides were extracted from green Coffea arabica beans with water (90 °C, 1 h). Galactomannans were isolated from the water extract using preparative anion-exchange chromatography. Almost all of the galactomannans eluted in two neutral populations, while almost all of the arabinogalactans bo

  20. Microbiological safety of kinema: a fermented soya bean food.

    NARCIS (Netherlands)

    Nout, M.J.R.; Bakshi, D.; Sarkar, P.K.

    1998-01-01

    Kinema is a fermented soya bean food of Nepal and the hilly regions of Northeastern States of India. Generally, the fermentation is dominated by Bacillus spp. that often cause alkalinity and desirable stickiness in the product. The present study was undertaken in a limited number of commercial (mark

  1. Studies on interference between newly defined bean-infecting potyviruses.

    NARCIS (Netherlands)

    Khan, J.A.

    1993-01-01

    Bean common mosaic virus (BCMV) and blackeye cowpea mosaic virus (BICMV) belonging to the genus Potyvirus of the plant virus family Potyviridae (Barnett, 1991, 1992) are of great economic importance. A large number of strains of BCMV and BlCMV are found to occur in nature, either in single or in mix

  2. Allelopathic potential of a noxious weed on mung bean

    Directory of Open Access Journals (Sweden)

    Parthapratim Maiti

    2013-10-01

    Full Text Available Eupatorium odoratum have invaded the waste lands of South West Bengal, India. A field study indicated a gradual and also significant increase in Eupatorium odoratum accompanied with significant decrease in other coexisting species. Considering the above in mind, a study was undertaken to evaluate the existence of inhibitory effect of leaf extracts and leaf leachates noxious weed Eupatorium odoratum using fully viable seeds of mung bean (Vigna radiata as the bioassay material. The study showed the reduced the percentage germination and TTC stainability along with extended T50 values of mung bean seeds. The levels of protein, DNA and RNA, activities of dehydrogenase and catalase enzymes were significantly retarded in pretreated seed samples. Amino acid and sugar levels were increased in the leachates of seeds pretreated with leaf extracts and leaf leachates. Thus, from the overall results it can be concluded that various inhibitors present in E. odoratum can impart strong inhibitory effect on mung bean. The study suggests that the leaves of E. odoratum possess phytotoxic or allelopathic chemicals which potentially rendered the inhibitory action on mung bean seeds.

  3. Detection of radiation treatment of beans using DNA comet assay

    Science.gov (United States)

    Khan, Ashfaq A.; Khan, Hasan M.; Delincée, Henry

    2002-03-01

    A simple technique of microgel electrophoresis of single cells (DNA Comet Assay) enabled a quick detection of radiation treatment of several kinds of leguminous beans (azuki, black, black eye, mung, pinto, red kidney and white beans). Each variety was exposed to radiation doses of 0.5, 1 and 5kGy covering the permissible limits for insect disinfestation. The cells or nuclei from beans were extracted in cold PBS, embedded in agarose on microscope slides, lysed between 15 and 60min in 2.5% SDS and electrophoresis was carried out at a voltage of 2V/cm for 2-2.5min. After silver staining, the slides were evaluated through an ordinary transmission microscope. In irradiated samples, fragmented DNA stretched towards the anode and the damaged cells appeared as a comet. The density of DNA in the tails increased with increasing radiation dose. However, in non-irradiated samples, the large molecules of DNA remained relatively intact and there was only minor or no migration of DNA; the cells were round or had very short tails only. Hence, the DNA comet assay provides an inexpensive, rapid and relatively simple screening method for the detection of irradiated beans.

  4. Performance Evaluation of Rotating Cylinder Type Coffee Bean Roaster

    Directory of Open Access Journals (Sweden)

    Sutarsi

    2010-04-01

    Full Text Available One strategy attempts to reduce dependence on primary commodity markets are overseas market expansion and development of secondary products. In the secondary product processing coffee beans is required of supporting equipment to facilitate these efforts. Research Center for Indonesian Coffee and Cocoa has developed coffee bean roaster. However, there are still many people who do not know about the technical aspects of roaster machine type of rotating cylinder so that more people use traditional ways to roast coffee beans. In order for the benefits of this machine is better known society it is necessary to study on the technical aspects. The purpose of this research is to evaluate the technical performance of the coffee beans roaster machine type of rotating cylinder. These include the technical aspects of work capacity of the machine, roasting technical efficiency, fuel requirements, and power requirements of using roaster machine. Research methods are including data collection, calculation and analysis. The results showed that the roaster machine type of a rotating cylinder has capacity of 12.3 kg/hour. Roasting efficiency is 80%. Fuel consumption is 0.6 kg. The calculated amount of the used power of current measurement is the average of 0.616 kW.

  5. A Nomadic Subtelomeric Disease Resistance Gene Cluster in Common Bean

    Science.gov (United States)

    The B4 resistance (R)-gene cluster, located in subtelomeric region of chromosome 4, is one of the largest clusters known in common bean (Phaseolus vulgaris, Pv). We sequenced 650 kb spanning this locus and annotated 97 genes, 26 of which correspond to Coiled-coil-Nucleotide-Binding-Site-Leucine-Rich...

  6. Texturized pinto bean protein fortification in straight dough bread formulation

    Science.gov (United States)

    Pinto beans were milled and then air-classified to obtain a raw high protein fraction (RHPF) followed by extrusion to texturize the protein fraction. The texturized high protein fraction (THPF) was then milled to obtain flour, and combined with wheat flour at 5%, 10%, and 15% levels to make bread. A...

  7. The cholesterol-raising factor from coffee beans.

    NARCIS (Netherlands)

    Urgert, R.; Katan, M.B.

    1996-01-01

    Coffee beans and some types of coffee brew - not the regular types of coffee prepared with a paper filter or with soluble coffee granules - contain the diterpenes cafestol and kahweol. Cafestol and kahweol raise the serum concentration of cholesterol and triglycerides in humans, and they also appear

  8. Transgenic sweet potato expressing thionin from barley gives resistance to black rot disease caused by Ceratocystis fimbriata in leaves and storage roots.

    Science.gov (United States)

    Muramoto, Nobuhiko; Tanaka, Tomoko; Shimamura, Takashi; Mitsukawa, Norihiro; Hori, Etsuko; Koda, Katsunori; Otani, Motoyasu; Hirai, Masana; Nakamura, Kenzo; Imaeda, Takao

    2012-06-01

    Black rot of sweet potato caused by pathogenic fungus Ceratocystis fimbriata severely deteriorates both growth of plants and post-harvest storage. Antimicrobial peptides from various organisms have broad range activities of killing bacteria, mycobacteria, and fungi. Plant thionin peptide exhibited anti-fungal activity against C. fimbriata. A gene for barley α-hordothionin (αHT) was placed downstream of a strong constitutive promoter of E12Ω or the promoter of a sweet potato gene for β-amylase of storage roots, and introduced into sweet potato commercial cultivar Kokei No. 14. Transgenic E12Ω:αHT plants showed high-level expression of αHT mRNA in both leaves and storage roots. Transgenic β-Amy:αHT plants showed sucrose-inducible expression of αHT mRNA in leaves, in addition to expression in storage roots. Leaves of E12Ω:αHT plants exhibited reduced yellowing upon infection by C. fimbriata compared to leaves of non-transgenic Kokei No. 14, although the level of resistance was weaker than resistance cultivar Tamayutaka. Storage roots of both E12Ω:αHT and β-Amy:αHT plants exhibited reduced lesion areas around the site inoculated with C. fimbriata spores compared to Kokei No. 14, and some of the transgenic lines showed resistance level similar to Tamayutaka. Growth of plants and production of storage roots of these transgenic plants were not significantly different from non-transgenic plants. These results highlight the usefulness of transgenic sweet potato expressing antimicrobial peptide to reduce damages of sweet potato from the black rot disease and to reduce the use of agricultural chemicals.

  9. Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids.

    Science.gov (United States)

    Babikova, Zdenka; Gilbert, Lucy; Randall, Kate C; Bruce, Toby J A; Pickett, John A; Johnson, David

    2014-10-01

    Arbuscular mycorrhizal (AM) fungi, important plant mutualists, provide plants with nutrients such as phosphorus (P) in return for carbon. AM fungi also enhance the attractiveness of plants to aphids via effects on emissions of plant volatiles used in aphid host location. We tested whether increased P uptake by plants is the mechanism through which AM fungi alter the volatile profile of plants and aphid behavioural responses by manipulating the availability of P and AM fungi to broad beans (Vicia faba L.) in a multi-factorial design. If AM fungi affect plant volatiles only via increased P acquisition, we predicted that the emission of volatiles and the attractiveness of mycorrhizal beans to aphids would be similar to those of non-mycorrhizal beans supplied with additional P. AM fungi and P addition increased leaf P concentrations by 40 and 24%, respectively. The production of naphthalene was less in mycorrhizal plants, regardless of P addition. By contrast, production of (S)-linalool, (E)-caryophyllene and (R)-germacrene D was less in plants colonized by AM fungi but only in the absence of P additions. The attractiveness of plants to pea aphids (Acyrthosiphon pisum Harris) was positively affected by AM fungi and correlated with the extent of root colonization; however, attractiveness was neither affected by P treatment nor correlated with leaf P concentration. These findings suggest that increased P uptake is not the main mechanism by which mycorrhiza increase the attractiveness of plants to aphids. Instead, the mechanism is likely to operate via AM fungi-induced plant systemic signalling.

  10. Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids

    Science.gov (United States)

    Babikova, Zdenka; Gilbert, Lucy; Randall, Kate C.; Bruce, Toby J. A.; Pickett, John A.; Johnson, David

    2014-01-01

    Arbuscular mycorrhizal (AM) fungi, important plant mutualists, provide plants with nutrients such as phosphorus (P) in return for carbon. AM fungi also enhance the attractiveness of plants to aphids via effects on emissions of plant volatiles used in aphid host location. We tested whether increased P uptake by plants is the mechanism through which AM fungi alter the volatile profile of plants and aphid behavioural responses by manipulating the availability of P and AM fungi to broad beans (Vicia faba L.) in a multi-factorial design. If AM fungi affect plant volatiles only via increased P acquisition, we predicted that the emission of volatiles and the attractiveness of mycorrhizal beans to aphids would be similar to those of non-mycorrhizal beans supplied with additional P. AM fungi and P addition increased leaf P concentrations by 40 and 24%, respectively. The production of naphthalene was less in mycorrhizal plants, regardless of P addition. By contrast, production of (S)-linalool, (E)-caryophyllene and (R)-germacrene D was less in plants colonized by AM fungi but only in the absence of P additions. The attractiveness of plants to pea aphids (Acyrthosiphon pisum Harris) was positively affected by AM fungi and correlated with the extent of root colonization; however, attractiveness was neither affected by P treatment nor correlated with leaf P concentration. These findings suggest that increased P uptake is not the main mechanism by which mycorrhiza increase the attractiveness of plants to aphids. Instead, the mechanism is likely to operate via AM fungi-induced plant systemic signalling. PMID:25200735

  11. Evaluation of some bean lines tolerance to alkaline soil

    Directory of Open Access Journals (Sweden)

    Abeer A. Radi

    2012-01-01

    Full Text Available Introduction: In less arid climates, salts are less concentrated and sodium dominates in carbonate and bicarbonate forms, which enhance the formation of alkaline soils. The development and identification of salt-tolerant crop cultivars or lines would complement salt management programs to improve the productivity and yields of salt stressed plants.Materials and methods: This work was to study the evaluation of alkalinity tolerance of some bean lines grown under different levels of sodium carbonate (Na2CO3 to select the most alkalinity tolerant lines versus the most-sensitive ones out of 6 lines of the test plants.Results: The symptoms induced by alkalinity included reduction in root, shoot growth, and leaf area which were more severe in some bean lines. Potassium leakage was severely affected by alkalinity in some lines at all tested levels, while in some others a moderate damage was manifested only at the higher levels. The increase in Na2CO3 level was associated with a gradual fall in chlorophyll a and b biosynthesis of all the test bean lines. However, alkalinity at low and moderate levels had a favorable effect on the biosynthesis of carotenoids in all the test bean lines. The increase in Na2CO3 supply had a considerable stimulatory effect on sodium accumulation, while potassium accumulation fluctuated in organs of bean lines.Conclusion: Assiut 1104 out of all the different lines investigated was found to display the lowest sensitivity to alkalinity stress, while Assiut 12/104 was the most sensitive one.

  12. Biodegradation of 1,2,3,4-tetrachlorodibenzo-p-dioxin in liquid broth by brown-rot fungi.

    Science.gov (United States)

    Perlatti, Bruno; da Silva, Maria Fátima das Graças Fernandes; Fernandes, João Batista; Forim, Moacir Rossi

    2013-11-01

    Dioxins are a class of extremely hazardous molecules that might pose a threat to the environment. This work evaluated the microbial degradation of 1,2,3,4-tetrachlorodibenzo-p-dioxin (1,2,3,4-TCDD), in liquid broth using three brown-rot fungi and one white-rot fungi as control. A fast and reliable extraction method with recoveries of over 98% together with a validated GC-MS method was developed, and applied to quantify 1,2,3,4-TCDD in liquid broth, mycelia and reaction flask, with detection limits of 10 ppb. Among the four strains tested, brown-rot fungus Aspergillus aculeatus showed best results, removing up to 21% of dioxin after 30-day incubation. The results open both a path for biotechnological interest in bioremediation purposes and environmental behavior studies by using brown-rot fungus.

  13. BIODEGRADATION OF ENVIRONMENTAL POLLUTANTS BY THE WHITE ROT FUNGUS PHANEROCHAETE CHRYSOPORIUM: INVOLVEMENT OF THE LIGNIN DEGRADING SYSTEM

    Science.gov (United States)

    The white-rot fungus Phanrochaete chrysosporium has the ability to degrade a wide variety of structurally diverse organic compounds, including a number of environmentally persistent organopollutants. The unique biodegradative abilities of this fungus appears to be depend...

  14. NODC Standard Format Pathology Data Sets (1973-1975): Fin Rot (F006) Data (NODC Accession 0014147)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Fin Rot (F006) dataset contains data from examinations of the biological condition of diseased fishes. For tow samples collected, data include: total number of...

  15. Growth kinetics and efficacy as parameters for ranking and selecting biocontrol agents that reduce pink rot in stored potatoes

    Science.gov (United States)

    Increased production of organic agricultural products and the relative ineffectiveness of traditional control measures support development of new biocontrol technologies for use against pink rot infections in storage. The microbiota of 84 different agricultural soils was individually transferred to...

  16. AGRICULTURAL PRACTICES, MORPHOLOGIC, PROTEINIC AND CULINARY DESCRIPTION OF THE GRAIN OF BEAN CULTIVARS SOWED IN THE REGION OF TLATZALA, GUERRERO

    Directory of Open Access Journals (Sweden)

    Fausto Solano Cervantes

    2009-08-01

    Full Text Available The research had for object describe the productive process of the of bean culture in the community of Tlatzala, Guerrero and the species diversity by means of the morphologic characteristics of the grain, protein content and the culinary quality. 30 questionnaires were applied to bean producers and 20 varieties of bean were collected from which the morphologic characters of the grain, protein content and the culinary characters were obtained. The production cycle of bean initiates in May and finishes in October. The technology used is traditional, characterized by the use of the yoke in the labors of the culture that demands workforce to realize the activities of manual form. The biological cycle of the varieties begins in June, the variation at time is determinated for the cultivated genotype. The determinate or indeterminate bush beans are predominant (65 %. The sowing systems are intercalated (50 % and associated with maize (30 % and monoculture (20 %. The varieties Rojito and Blanco have special uses, the first one has the attribute of being consumed as green-bean all the year around and the second one is used to prepare the dish called Chile-ajo. The Black beans were the most frequent (45 % followed by the Red beans (35 % and the least frequent were the Striped one (5 % and Muddy-like (5 %. The kidney shape of grain was the most abundant (85 % and the oval one was the least frequent (5 %. The grain weight changed from 14.4 up to 38.5 g. The sizes of grains founded were medium (50 % and small (50 %. The protein content registered was: White beans 24.68 %, Red bean 24.64 %, Black beans 23.5 % and Striped beans of guide 22.27 %. The Rojito Enano had the major protein content (27.6 %. The cooking times were: Red beans 73 minutes, Striped of guide bean 65.5, Blacks bean 64.6 and Whites bean 59. The Black bean Enano-1 used less time (54 minutes. The Striped of guide bean registered the major amount of solid (0.32 %, followed by the Black beans

  17. Giant Broad Line Regions in Dwarf Seyferts

    CERN Document Server

    Devereux, Nick

    2015-01-01

    High angular resolution spectroscopy obtained with the Hubble Space Telescope (HST) has revealed a remarkable population of galaxies hosting dwarf Seyfert nuclei with an unusually large broad-line region (BLR). These objects are remarkable for two reasons. Firstly, the size of the BLR can, in some cases, rival those seen in the most luminous quasars. Secondly, the size of the BLR is not correlated with the central continuum luminosity, an observation that distinguishes them from their reverberating counterparts. Collectively, these early results suggest that non-reverberating dwarf Seyferts are a heterogeneous group and not simply scaled versions of each other. Careful inspection reveals broad H Balmer emission lines with single peaks, double peaks, and a combination of the two, suggesting that the broad emission lines are produced in kinematically distinct regions centered on the black hole (BH). Because the gravitational field strength is already known for these objects, by virtue of knowing their BH mass, ...

  18. Beans, Boats and Archaeobotany : A New Translation of Phasolus, or why the Romans ate neither Kidney beans nor Cow peas

    NARCIS (Netherlands)

    Heinrich, Frits; Wilkins, D.A.

    2014-01-01

    Among classicists, archaeobotanists and agricultural historians, the meaning of the word phasolus (ϕασηλος in Greek) is ambiguous. While Latin scholars have agreed that the word refers to a type of pulse or bean, there are various interpretations and subsequent identifications as to which botanical

  19. Associations of planting date, drought stress, and insects with Fusarium ear rot and fumonisin B1 contamination in California maize.

    Science.gov (United States)

    Parsons, M W; Munkvold, G P

    2010-05-01

    Fusarium ear rot, caused by Fusarium verticillioides, is one of the most common diseases of maize, causing yield and quality reductions and contamination of grain by fumonisins and other mycotoxins. Drought stress and various insects have been implicated as factors affecting disease severity. Field studies were conducted to evaluate the interactions and relative influences of drought stress, insect infestation, and planting date upon Fusarium ear rot severity and fumonisin B1 contamination. Three hybrids varying in partial resistance to Fusarium ear rot were sown on three planting dates and subjected to four irrigation regimes to induce differing levels of drought stress. A foliar-spray insecticide treatment was imposed to induce differing levels of insect injury. Populations of thrips (Frankliniella spp.), damage by corn earworm (Helicoverpa zeae), Fusarium ear rot symptoms, and fumonisin B1 levels were assessed. There were significant effects of hybrid, planting date, insecticide treatment, and drought stress on Fusarium ear rot symptoms and fumonisin B1 contamination, and these factors also had significant interacting effects. The most influential factors were hybrid and insecticide treatment, but their effects were influenced by planting date and drought stress. The more resistant hybrids and the insecticide-treated plots consistently had lower Fusarium ear rot severity and fumonisin B1 contamination. Later planting dates typically had higher thrips populations, more Fusarium ear rot, and higher levels of fumonisin B1. Insect activity was significantly correlated with disease severity and fumonisin contamination, and the correlations were strongest for thrips. The results of this study confirm the influence of thrips on Fusarium ear rot severity in California, USA, and also establish a strong association between thrips and fumonisin B1 levels.

  20. Export and Competitiveness of Indonesian Coffee Bean in International Market: Strategic Implication for the Development of Organic Coffee Bean

    Directory of Open Access Journals (Sweden)

    Bambang Drajat

    2007-07-01

    Full Text Available The performance of Indonesian coffee bean export from 1995 to 2004was not satisfactory. This implied that there were problems of the competitiveness of Indonesian coffee bean export. This study was expected to come up withsome views related with the problem. This study was aimed to analyze the competitiveness of Indonesian coffee bean export in international markets. Somepolicy implication would be derived following the conclusions. In addition,this study was aimed to deliver some arguments referring to organic coffee development as an alternative export development. Data used in this study wastime series data ranging from 1995 to 2004 supported with some primary data.The export data were analyzed descriptively and the Revealed ComparativeAdvantage (RCA Index employed to analyze the competitiveness of Indonesian coffee bean export. The results of the analysis gave some conclusions, asfollows : (1 The export of Indonesian coffee bean was product oriented notmarket oriented. (2 The Indonesian coffee bean export was characterized withlow quality with no premium price, different from that of Vietnam coffee export. (3 Besides quality, the uncompetitive Indonesian coffee export was related to market hegemony by buyers, emerging issue of Ochratoxin A. contamination and high cost economy in export. (4 The competitiveness of Indonesian coffee export was lower than those other countries, such as Columbia,Honduras, Peru, Brazil, and Vietnam. (5 Indonesia still held opportunity todevelop organic coffee for export. Some policy implications emerged from thediscussion were as follows : (1 The Government should facilitate market development through the provisions of market information and export incentives.(2 The Government should develop and applied national standard of coffeebean referring to that of international, as well as, improve processing technology equipments in the farm level for both wet and dry process. (3 Besides improving quality, the improvement

  1. Modelling Demand for Broad Money in Australia

    OpenAIRE

    Abbas Valadkhani

    2002-01-01

    The existence of a stable demand for money is very important for the conduct of monetary policy. It is argued that previous work on the demand for money in Australia has not been very satisfactory in a number of ways. This paper examines the long- and short-run determinants of the demand for broad money employing the Johansen cointegration technique and a short-run dynamic model. Using quarterly data for the period 1976:3-2002:2, this paper finds, inter alia, that the demand for broad money i...

  2. Agronomic performance of naked oat (Avena nuda L. and faba bean intercropping

    Directory of Open Access Journals (Sweden)

    Agnieszka Klimek-Kopyra

    2015-06-01

    Full Text Available The most common cereals for faba bean (Vicia faba L. used in intercrops is conventional oat (Avena sativa L. An alternative to oat may be naked oat (Avena nuda L., whose oil content and quality is double. Here, intercropping of naked oat with two different faba bean cultivars (determinate-high tannin and indeterminate-low tannin was compared with sole crops of each species in 2006-2008. The treatments were: sole naked oat at 500 kernels m², indeterminate sole faba bean at 50 seeds m², determinate sole faba bean at 70 seeds m², and an additive series of 25%, 50%, and 75% of faba bean seeding rate mixed with the naked oat seeding rate. Our results demonstrated that intercropping increased the Land Equivalent Ratio by +3% to +9% over sole cropping. Raising the faba bean seeding rate in a mixture from 25% to 75% reduced oat grain yield from 630 (determinate cultivar to 760 kg ha-1 (indeterminate cultivar but increased faba bean grain yield from 760 kg ha-1. Higher yield and leaf area index (LAI and photosynthetically active radiation (PAR values show that the indeterminate cultivar of faba bean is more suitable in mixture with naked oat. The high value of competition index (CR > 1 indicates domination and aggressiveness of faba bean towards naked oat. Regardless of cultivar type, mixture of faba bean with naked oat is less productive than pure sowing.

  3. Survey of Basal Stem Rot Disease on Oil Palms (Elaeis guineensis Jacq.) in Kebun Bukit Kijang,North Sumatera, Indonesia

    Science.gov (United States)

    Lisnawita; Hanum, H.; Tantawi, A. R.

    2016-08-01

    Basal stem rot disease caused by Ganoderma sp. is a significant disease on oil palm plantations in Indonesia, especially in North Sumatera. Currently, the pathogen does not only attack the plants that have produced (old plants) but also attacks the plants that have not produced in the first generation yet. A survey of the distribution of the basal stem rot disease in the plantation of the community has been completed in order to illustrate the distribution and the incidence of the basal stem rot disease in 5 locations of the oil palm plantation of the community in Desa Bukit Kijang, Region of Asahan, North Sumatera, Indonesia. From the research, it is revealed that the basal stem rot disease has spread to all of the observed locations with the level of disease incidence between 0.71% in Kebun Bukit Kijang 3 to 50% in the 17 years old oil palm in Kebun Bukit Kijang 4 and Bukit Kijang 5. The observable symptoms of the basal stem rot disease are chlorotic leaves, the appearance of fruiting body, collapsed plants, and the existence of holes on the basal stem. The incidence of basal stem rot disease is higher on land due to a high sand content (>50%).

  4. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi

    Directory of Open Access Journals (Sweden)

    Mariusz eTadych

    2015-08-01

    Full Text Available Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fungi remain mostly asymptomatic until the fruit begins to mature in late August. Temporal fluctuations and quantitative differences in selected organic acid profiles between fruit of six cranberry genotypes during the growing season were observed. The concentration of benzoic acid in fruit increased while quinic acid decreased throughout fruit development. In general, more rot-resistant genotypes showed higher levels of benzoic acid early in fruit development and more gradual decline in quinic acid levels than that observed in the more rot-susceptible genotypes. We evaluated antifungal activities of selected cranberry constituents and found that most bioactive compounds either had no effects or stimulated growth or reactive oxygen species (ROS secretion of four tested cranberry fruit rot fungi, while benzoic acid and quinic acid reduced growth and suppressed secretion of ROS by these fungi. We propose that variation in the levels of ROS suppressive compounds, such as benzoic and quinic acids, may influence virulence by the fruit rot fungi. Selection for crops that maintain high levels of virulence suppressive compounds could yield new disease resistant varieties. This could represent a new strategy for control of disease caused by necrotrophic pathogens that exhibit a latent or endophytic phase.

  5. High-throughput metabolic profiling of diverse green Coffea arabica beans identified tryptophan as a universal discrimination factor for immature beans.

    Directory of Open Access Journals (Sweden)

    Daiki Setoyama

    Full Text Available The maturity of green coffee beans is the most influential determinant of the quality and flavor of the resultant coffee beverage. However, the chemical compounds that can be used to discriminate the maturity of the beans remain uncharacterized. We herein analyzed four distinct stages of maturity (immature, semi-mature, mature and overripe of nine different varieties of green Coffea arabica beans hand-harvested from a single experimental field in Hawaii. After developing a high-throughput experimental system for sample preparation and liquid chromatography-mass spectrometry (LC-MS measurement, we applied metabolic profiling, integrated with chemometric techniques, to explore the relationship between the metabolome and maturity of the sample in a non-biased way. For the multivariate statistical analyses, a partial least square (PLS regression model was successfully created, which allowed us to accurately predict the maturity of the beans based on the metabolomic information. As a result, tryptophan was identified to be the best contributor to the regression model; the relative MS intensity of tryptophan was higher in immature beans than in those after the semi-mature stages in all arabica varieties investigated, demonstrating a universal discrimination factor for diverse arabica beans. Therefore, typtophan, either alone or together with other metabolites, may be utilized for traders as an assessment standard when purchasing qualified trading green arabica bean products. Furthermore, our results suggest that the tryptophan metabolism may be tightly linked to the development of coffee cherries and/or beans.

  6. Teaching the Broad, Interdisciplinary Impact of Evolution

    Science.gov (United States)

    Benson, David; Atlas, Pierre; Haberski, Raymond; Higgs, Jamie; Kiley, Patrick; Maxwell, Michael, Jr.; Mirola, William; Norton, Jamey

    2009-01-01

    As perhaps the most encompassing idea in biology, evolution has impacted not only science, but other academic disciplines as well. The broad, interdisciplinary impact of evolution was the theme of a course taught at Marian College, Indianapolis, Indiana in 2002, 2004, and 2006. Using a strategy that could be readily adopted at other institutions,…

  7. The GREGOR Broad-Band Imager

    Science.gov (United States)

    von der Lühe, O.; Volkmer, R.; Kentischer, T. J.; Geißler, R.

    2012-11-01

    The design and characteristics of the Broad-Band Imager (BBI) of GREGOR are described. BBI covers the visible spectral range with two cameras simultaneously for a large field and with critical sampling at 390 nm, and it includes a mode for observing the pupil in a Foucault configuration. Samples of first-light observations are shown.

  8. The effects of fin rot disease and sampling method on blood chemistry and hematocrit measurements of winter flounder, Pseudopleuronectes americanus from New Haven Harbor (1987--1990).

    Science.gov (United States)

    Ziskowski, J; Mercaldo-Allen, R; Pereira, J J; Kuropat, C; Goldberg, R

    2008-04-01

    Winter flounder from New Haven, Connecticut were evaluated for fin rot disease. Blood samples collected from healthy and diseased fish were used to measure bilirubin, calcium, hematocrit, inorganic phosphorus, osmolality, and total protein. Blood measurements were significantly affected by the presence of fin rot disease and by sampling mode (bled immediately or after 18 h). A reduction in blood chemistry values was associated with fin rot disease. Logistic regression modeling was used to identify explanatory variables contributing to the fin rot outcome in winter flounder. Blood constituent levels were higher in fish bled immediately versus 18 h post-capture, especially among fish without fin rot, suggesting that a waiting period is necessary for blood values to stabilize following initial sampling stress. This study presents evidence that winter flounder blood chemistry and hematocrit measurements are affected by fin rot disease.

  9. The delignification effects of white-rot fungal pretreatment on thermal characteristics of moso bamboo.

    Science.gov (United States)

    Zeng, Yelin; Yang, Xuewei; Yu, Hongbo; Zhang, Xiaoyu; Ma, Fuying

    2012-06-01

    Moso bamboo (Phyllostachys pubesescens) is a major bamboo species which is widely used for temporary scaffolding in China. Its fast growing and low ash content make moso bamboo a potential renewable energy resource. In present work, thermal behaviors of moso bamboo and its lignocellulosic fractions were investigated using thermogravimetric analysis. Furthermore, to understand whether the delignification effect of white-rot fungi can promote the thermal decomposition of bamboo especially the lignin component, the changes in lignocellulose components as well as thermal behaviors of bamboo and acid detergent lignin were investigated. The results showed that the white-rot fungal pretreatment is advantageous to thermal decomposition of lignin in bamboo. The weight losses of ADL samples became greater and the thermal processes were accelerated after biopretreatment. The total pyrolysis weight loss increased from 57.14% to 65.07% for Echinodontium taxodii 2538 treated bamboo ADL sample.

  10. Biological decolourisation of pulp mill effluent using white rot fungus Trametes versicolor.

    Science.gov (United States)

    Srinivasan, S V; Murthy, D V S; Swaminathan, T

    2012-07-01

    The conventional biological treatment methods employed in the pulp and paper industries are not effective in reducing the colour and chemical oxygen demand (COD). The white-rot fungi are reported to have the ability to biodegrade the lignin and its derivatives. This paper is focused on the biological treatment of pulp mill effluent from a bagasse-based pulp and paper industry using fungal treatment. Experiments were conducted using the white rot fungus, Trametes versicolor in shake flasks operated in batch mode with different carbon sources. The decolourisation efficiencies of 82.5% and 80.3% were obtained in the presence of 15 g/L and 5 g/L of glucose and sucrose concentrations respectively with a considerable COD reduction. The possibility of reusing the grown fungus was examined for repeated treatment studies.

  11. Synergistic Effects of Nanochitin on Inhibition of Tobacco Root Rot Disease.

    Science.gov (United States)

    Zhou, Yang; Jiang, Shijun; Jiao, Yongji; Wang, Hezhong

    2017-02-22

    Nanomaterials have great potential for use in various fields, due to their unique properties. In order to explore the bioactivity of nanochitin on tobacco, the effects of nanochitin suspensions on tobacco seed germination, seedling growth, and synergistic effects with fungicides were studied in indoor and field trials. Results showed that 0.004% (w/v) of nanochitin improved tobacco seed germination and shortened mean time to germination significantly; 0.005% (w/v) of nanochitin increased tobacco stem length, stem girth, leaf number and leaf area, and 0.001% (w/v) of nanochitin had synergistic effects on inhibition of tobacco root rot when mixed with metalaxyl mancozeb and thiophanate methyl fungicides. This indicates that nanochitin suspensions have a strong potential to protect tobacco from tobacco root rot diseases and reduce the use of chemical fungicides in tobacco plantations.

  12. Temporal changes in wood crystalline cellulose during degradation by brown rot fungi

    DEFF Research Database (Denmark)

    Howell, Caitlin; Hastrup, Anne Christine Steenkjær; Goodell, Barry;

    2009-01-01

    The degradation of wood by brown rot fungi has been studied intensely for many years in order to facilitate the preservation of in-service wood. In this work we used X-ray diffraction to examine changes in wood cellulose crystallinity caused by the brown rot fungi Gloeophyllum trabeum, Coniophora...... planes in all degraded samples after roughly 20% weight loss, as well as a decrease in the average observed relative peak width at 2¿ = 22.2°. These results may indicate a disruption of the outer most semi-crystalline cellulose chains comprising the wood microfibril. X-ray diffraction analysis of wood...... subjected to biological attack by fungi may provide insight into degradative processes and wood cellulose structure....

  13. The GSTome Reflects the Chemical Environment of White-Rot Fungi.

    Directory of Open Access Journals (Sweden)

    Aurélie Deroy

    Full Text Available White-rot fungi possess the unique ability to degrade and mineralize all the different components of wood. In other respects, wood durability, among other factors, is due to the presence of extractives that are potential antimicrobial molecules. To cope with these molecules, wood decay fungi have developed a complex detoxification network including glutathione transferases (GST. The interactions between GSTs from two white-rot fungi, Trametes versicolor and Phanerochaete chrysosporium, and an environmental library of wood extracts have been studied. The results demonstrate that the specificity of these interactions is closely related to the chemical composition of the extracts in accordance with the tree species and their localization inside the wood (sapwood vs heartwood vs knotwood. These data suggest that the fungal GSTome could reflect the chemical environment encountered by these fungi during wood degradation and could be a way to study their adaptation to their way of life.

  14. Two Newly Described Begomoviruses of Macroptilium lathyroides and Common Bean.

    Science.gov (United States)

    Idris, A M; Hiebert, E; Bird, J; Brown, J K

    2003-07-01

    ABSTRACT Macroptilium lathyroides, a perennial weed in the Caribbean region and Central America, is a host of Macroptilium yellow mosaic Florida virus (MaYMFV) and Macroptilium mosaic Puerto Rico virus (MaMPRV). The genomes of MaYMFV and MaMPRV were cloned from M. lathyroides and/or field-infected bean and the DNA sequences were determined. Cloned A and B components for both viruses were infectious when inoculated to M. lathyroides and common bean. Comparison of the DNA sequences for cloned A and B components with well-studied begomovirus indicated that MaMPRV (bean and M. lathyroides) and MaYMFV (M. lathyroides) are unique, previously undescribed begomo-viruses from the Western Hemisphere. Phylogenetic analysis of viral A components indicated that the closest relative of MaYMFV are members of the Bean golden yellow mosaic virus (BGYMV) group, at 76 to 78% nucleotide identity, whereas the closest relative for the A component of MaMPRV was Rhynchosia golden mosaic virus at 78% nucleotide identity. In contrast, BGYMV is the closest relative for the B component of both MaYMFV and MaMPRV, with which they share approximately 68.0 and approximately 72% identity, respectively. The incongruent taxonomic placement for the bipartite components for MaMPRV indicates that they did not evolve entirely along a common path. MaYMFV and MaMPRV caused distinctive symptoms in bean and M. lathyroides and were transmissible by the whitefly vector and by grafting; however, only MaYMFV was mechanically transmissible. The experimental host range for the two viruses was similar and included species within the families Fabaceae and Malvaceae, but only MaYMFV infected Malva parviflora and soybean. These results collectively indicate that MaMPRV and MaYMFV are new, previously undescribed species of the BGYMV group, a clade previously known to contain only strains and isolates of BGYMV from the Caribbean region that infect Phaseolus spp. Both MaYMFV and MaMPRV may pose an economic threat to

  15. Gibberella stalk rot (Fusarium graminearum) resistance of maize inbreds and their F1 hybrids and their potential for use in resistance breeding programs

    OpenAIRE

    Santiago Carabelos, Rogelio; Reid, Lana M.; Zhu, X.(Central China Normal University, Wuhan, China); Butrón Gómez, Ana María; Malvar Pintos, Rosa Ana

    2010-01-01

    Fusarium graminearum Schwabe is one of the predominant fungal species responsible for stalk rot of maize in Canada and many other countries. Adapted sources of resistance to this disease are scarce but recently a few have been identified. To evaluate the usefulness of these sources in a breeding programme to improve stalk rot resistance, a complete diallel cross of five inbreds of varying susceptibility to stalk rot was conducted. Artificial inoculations of stalks were accomplished by injecti...

  16. Identification and Pathogenicity of Phytopathogenic Bacteria Associated with Soft Rot Disease of Girasole Tuber

    OpenAIRE

    Mamdoh Ewis ISMAIL; Abdel-Monaim, Montaser Fawzy; Yasser Mahmoud MOSTAFA

    2012-01-01

    During 2010-2011 growing seasons six bacterial isolates were separated from naturally infected girasole plants tubers (Helianthus tuberosus L.) cv. �Balady�, showing soft rot, collected from experimental Farm of the Faculty of Agriculture, in El-Minia University, Egypt. Pathogenicity tests showed various virulence for the bacteria isolated from girasole tubers, found pathogenic. These organisms were characterized as rod-shaped, Gram negative, ?-methyl-d-glucoside medium, reducing substances f...

  17. Pectic Enzyme Activities of Bacteria Associated with Rotted Onions (Allium cepa)

    OpenAIRE

    Obi, Samuel K. C.; Umezurike, Gabriel M.

    1981-01-01

    The aerobic bacteria associated with soft rot in onions (Allium cepa) were isolated and identified as a Vibrio sp., Micrococcus epidermidis, Pseudomonas cepacia, an Acinetobacter sp., a Xanthomonas sp., Bacillus polymyxa, and Bacillus megaterium. With the cup-plate assay method, no pectin hydrolase could be detected from any of these isolates when they were cultured in pectin medium, but lyase and pectinesterases were detectable. Onion tissue cultures showed pectin hydrolase activity for P. c...

  18. Chemical Characterization of Different Sumac and Pomegranate Extracts Effective against Botrytis cinerea Rots

    OpenAIRE

    Romeo, Flora V.; Gabriele Ballistreri; Simona Fabroni; Sonia Pangallo; Maria Giulia Li Destri Nicosia; Leonardo Schena; Paolo Rapisarda

    2015-01-01

    Pomegranate (Punica granatum L.) peel and sumac (Rhus coriaria L.) fruit and leaf extracts were chemically characterized and their ability to inhibit table grape (cv. Italia) rots caused by Botrytis cinerea was evaluated on artificially inoculated berries. Different extraction methods were applied and extracts were characterized through Ultra Fast High Performance Liquid Chromatography coupled to Photodiode array detector and Electrospray ionization Mass spectrometer (UPLC-PDA-ESI/MSn) for th...

  19. Biocontrol Characteristics of Bacillus Species in Suppressing Stem Rot of Grafted Cactus Caused by Bipolaris cactivora.

    Science.gov (United States)

    Bae, Sooil; Kim, Sang Gyu; Kim, Young Ho

    2013-03-01

    One of the most important limiting factors for the production of the grafted cactus in Korea is the qualitative and quantitative yield loss derived from stem rots especially caused by Bipolaris cactivora. This study is aimed to develop microbial control agents useful for the control of the bipolaris stem rot. Two bacteria (GA1-23 and GA4-4) selected out of 943 microbial isolates because of their strong antibiotic activity against B. cactivora were identified as Bacillus subtilis and B. amyloliquefaciens, respectively, by the cultural characteristics, Biolog program and 16S rRNA sequencing analyses. Both bacterial isolates significantly inhibited the conidial germination and mycelial growth of the pathogen with no significant difference between the two, of which the inhibitory efficacies varied depending on the cultural conditions such as temperature, nutritional compositions and concentrations. Light and electron microscopy of the pathogen treated with the bacterial isolates showed the inhibition of spore germination with initial malformation of germ tubes and later formation of circle-like vesicles with no hyphal growth and hyphal disruption sometimes accompanied by hyphal swellings and shrinkages adjacent to the bacteria, suggesting their antibiotic mode of antagonistic activity. Control efficacy of B. subtilis GA1-23 and B. amyloliquefaciens GA4-4 on the cactus stem rot were not as high as but comparable to that of fungicide difenoconazole when they were treated simultaneously at the time of pathogen inoculation. All of these results suggest the two bacterial isolates have a good potential to be developed as biocontrol agents for the bipolaris stem rot of the grafted cactus.

  20. Biocontrol Characteristics of Bacillus Species in Suppressing Stem Rot of Grafted Cactus Caused by Bipolaris cactivora

    Directory of Open Access Journals (Sweden)

    Sooil Bae

    2013-03-01

    Full Text Available One of the most important limiting factors for the production of the grafted cactus in Korea is the qualitative and quantitative yield loss derived from stem rots especially caused by Bipolaris cactivora. This study is aimed to develop microbial control agents useful for the control of the bipolaris stem rot. Two bacteria (GA1-23 and GA4-4 selected out of 943 microbial isolates because of their strong antibiotic activity against B. cactivora were identified as Bacillus subtilis and B. amyloliquefaciens, respectively, by the cultural characteristics, Biolog program and 16S rRNA sequencing analyses. Both bacterial isolates significantly inhibited the conidial germination and mycelial growth of the pathogen with no significant difference between the two, of which the inhibitory efficacies varied depending on the cultural conditions such as temperature, nutritional compositions and concentrations. Light and electron microscopy of the pathogen treated with the bacterial isolates showed the inhibition of spore germination with initial malformation of germ tubes and later formation of circle-like vesicles with no hyphal growth and hyphal disruption sometimes accompanied by hyphal swellings and shrinkages adjacent to the bacteria, suggesting their antibiotic mode of antagonistic activity. Control efficacy of B. subtilis GA1-23 and B. amyloliquefaciens GA4-4 on the cactus stem rot were not as high as but comparable to that of fungicide difenoconazole when they were treated simultaneously at the time of pathogen inoculation. All of these results suggest the two bacterial isolates have a good potential to be developed as biocontrol agents for the bipolaris stem rot of the grafted cactus.

  1. Biocontrol Characteristics of Bacillus Species in Suppressing Stem Rot of Grafted Cactus Caused by Bipolaris cactivora

    Science.gov (United States)

    Bae, Sooil; Kim, Sang Gyu; Kim, Young Ho

    2013-01-01

    One of the most important limiting factors for the production of the grafted cactus in Korea is the qualitative and quantitative yield loss derived from stem rots especially caused by Bipolaris cactivora. This study is aimed to develop microbial control agents useful for the control of the bipolaris stem rot. Two bacteria (GA1-23 and GA4-4) selected out of 943 microbial isolates because of their strong antibiotic activity against B. cactivora were identified as Bacillus subtilis and B. amyloliquefaciens, respectively, by the cultural characteristics, Biolog program and 16S rRNA sequencing analyses. Both bacterial isolates significantly inhibited the conidial germination and mycelial growth of the pathogen with no significant difference between the two, of which the inhibitory efficacies varied depending on the cultural conditions such as temperature, nutritional compositions and concentrations. Light and electron microscopy of the pathogen treated with the bacterial isolates showed the inhibition of spore germination with initial malformation of germ tubes and later formation of circle-like vesicles with no hyphal growth and hyphal disruption sometimes accompanied by hyphal swellings and shrinkages adjacent to the bacteria, suggesting their antibiotic mode of antagonistic activity. Control efficacy of B. subtilis GA1-23 and B. amyloliquefaciens GA4-4 on the cactus stem rot were not as high as but comparable to that of fungicide difenoconazole when they were treated simultaneously at the time of pathogen inoculation. All of these results suggest the two bacterial isolates have a good potential to be developed as biocontrol agents for the bipolaris stem rot of the grafted cactus. PMID:25288927

  2. Biological pretreatment of softwood Pinus densiflora by three white rot fungi.

    Science.gov (United States)

    Lee, Jae-Won; Gwak, Ki-Seob; Park, Jun-Yeong; Park, Mi-Jin; Choi, Don-Ha; Kwon, Mi; Choi, In-Gyu

    2007-12-01

    The effects of biological pretreatment on the Japanese red pine Pinus densiflora, was evaluated after exposure to three white rot fungi Ceriporia lacerata, Stereum hirsutum, and Polyporus brumalis. Change in chemical composition, structural modification, and their susceptibility to enzymatic saccharification in the degraded wood were analyzed. Of the three white rot fungi tested, S. hirsutum selectively degraded the lignin of this sortwood rather than the holocellulose component. After eight weeks of pretreatment with S. hirsutum, total weight loss was 10.7%, while lignin loss was the highest at 14.52% among the tested samples. However, holocellulose loss was lower at 7.81% compared to those of C. lacerata and P. brumalis. Extracelluar enzymes from S. hirsutum showed higher activity of ligninase and lower activity of cellulase than those from other white rot fungi. Thus, total weight loss and changes in chemical composition of the Japanese red pine was well correlated with the enzyme activities related with lignin- and cellulose degradation in these fungi. Based on the data obtained from analysis of physical characterization of degraded wood by X-ray Diffractometry (XRD) and pore size distribution, S. hirsutum was considered as an effective potential fungus for biological pretreatment. In particular, the increase of available pore size of over 120 nm in pretreated wood powder with S. hirsutum made enzymes accessible for further enzymatic saccharification. When Japanese red pine chips treated with S. hirsutum were enzymatically saccharified using commercial enzymes (Cellulclast 1.5 L and Novozyme 188), sugar yield was greatly increased (21.01%) compared to non-pretreated control samples, indicating that white rot fungus S. hirsutum provides an effective process in increasing sugar yield from woody biomass.

  3. New polyhydroxylated metabolite derived from biotransformation of diosgenin by the white-rot fungus Coriolus versicolor

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Microbial transformation of diosgenin(1) was carried out with the white-rot fungus,Coriolus versicolor.A new polyhydroxyl metabolite,(25R)-spirost-5-ene-3β,7β,21-triol(2),was obtained as a result of hydroxylation.Its structure was elucidated on the basis of 1D and 2D NMR as well as HR-ESI-MS spectroscopic analysis.

  4. The Use of Antioxidants to Control Root Rot and Wilt Diseases of Pepper

    Directory of Open Access Journals (Sweden)

    Montaser Fawzy ABDEL-MONAIM

    2010-06-01

    Full Text Available Ten isolates of Fusarium spp were isolated from pepper plants collected from different locations in New Valley Governorate, Egypt. Fusarium solani isolate FP2 and F. oxysporum isolate FP4 were highly pathogenic isolates but the other isolates moderate or less pathogenic to pepper plants (cv. Anaheim-M. The four antioxidant compounds (coumaric acid, citric acid, propylgalate and salicylic acid each at 100 and 200 ppm were evaluated for their in vitro and in vivo agonist to Fusarium pathogenic isolates caused root rot and wilt diseases in pepper plants. All tested antioxidant compounds reduced damping-off, root rot/wilt and area under root rot/wilt progress curve when used as seed soaking, seedling soaking, and soil drench especially at 200 ppm under greenhouse and field conditions compared with untreated plants. All chemicals increased fresh and dry weight of seedling grown in soil drenching or seed treatment with any antioxidants. At the same time, all tested chemicals significantly increase plant growth parameters i.e plant length, plant branching, and total yield per plant in case of seedling soaking or soil drench. In general, propylgalate at 200 ppm was more efficient in reducing infection with damping-off, root rot and wilt diseases as well as increasing the seedling fresh weight, dry weight, plant length, plant branching, number of pod plant-1 and pod yield plant-1. On the other hand, all tested antioxidants had less or no effect on mycelial dry weight and mycelial leaner growth. On the contrary, all chemicals much reduced spore formation in both Fusarium species at 100 or 200 ppm and the inhibitory effect of antioxidants increased with increasing their concentrations.

  5. Relationship between potassium chloride suppression of corn stalk rot and soil microorganism characteristics

    Institute of Scientific and Technical Information of China (English)

    LIU Xiaoyan; JIN Jiyun; HE Ping; LIU Hailong; LI Wenjuan

    2007-01-01

    Observations from a site-fixed field trial of 12 years in Jilin Province show that potassium chloride (KC1)application has a significant positive influence on corn stalk rot incidence.Incubation experiments were conducted to study the effects of KC1 and soil extracts on the growth of Fusarium graminearum,the most common stalk rot fungi in this area,and the population changes in rhizosphere fungi,bacteria and actinomyces at different growth stages of corn.The results show that KC1 addition to the potato dextrose agar (PDA) medium could not directly suppress Fusarium graminearum development.Soil extracts from soil samples taken from the field plots with and without KC1 application affected Fusarium graminearum development,with soil extracts with KC1 treatments suppressing Fusarium graminearum development more significantly,compared with that from the KC1-free treatment.These results indicate that soil extracts play a role in the interaction between corn and Fusarium graminearum.Long-term KC1 application may increase the populations of rhizosphere fungi and actinomyces in the early growth stages,while there is no significant difference in the number of bacteria in rhizosphere among the treatments.Also,the populations of rhizosphere fungi are negatively correlated with the incidence of stalk rot in the early growth stages of corn.The sensitive infection stages of pathogen to corn consist of the stages when there is significant difference in the populations of rhizosphere fungi and actinomyces.The change of microorganism populations (especially fungi) in soil may be associated with the incidence decrease and is one of the mechanisms of KC1 suppressing corn stalk rot.

  6. Degradation of Phenanthrene by a chilean white rot fungus Anthracophyllum discolor

    Energy Technology Data Exchange (ETDEWEB)

    Acevedo, F.; Cuevas, R.; Rubilar, O.; Tortella, G.; Diez, M. C.

    2009-07-01

    Anthracophyllum discolor, a white rot fungus of southern Chile, has been an efficient degrader of clorophenols and azo dyes. This fungus produces ligninolytic enzymes being manganese peroxidase (Mn) the major one produced. The main purpose of this study was to evaluate the effect of phenanthrene concentration of ligninolytic activity of A. Discolor measured by poly R-478 decolorazation, and to evaluate the potential of this fungus for degrading phenanthrene in liquid media. (Author)

  7. Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta.

    Science.gov (United States)

    Zhang, Jiwei; Presley, Gerald N; Hammel, Kenneth E; Ryu, Jae-San; Menke, Jon R; Figueroa, Melania; Hu, Dehong; Orr, Galya; Schilling, Jonathan S

    2016-09-27

    Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside hydrolases (GHs). Given that ROS are strongly oxidizing and nonselective, these two steps are likely segregated. A common hypothesis has been that brown rot fungi use a concentration gradient of chelated metal ions to confine ROS generation inside wood cell walls before enzymes can infiltrate. We examined an alternative: that LOX components involved in ROS production are differentially expressed by brown rot fungi ahead of GH components. We used spatial mapping to resolve a temporal sequence in Postia placenta, sectioning thin wood wafers colonized directionally. Among sections, we measured gene expression by whole-transcriptome shotgun sequencing (RNA-seq) and assayed relevant enzyme activities. We found a marked pattern of LOX up-regulation in a narrow (5-mm, 48-h) zone at the hyphal front, which included many genes likely involved in ROS generation. Up-regulation of GH5 endoglucanases and many other GHs clearly occurred later, behind the hyphal front, with the notable exceptions of two likely expansins and a GH28 pectinase. Our results support a staggered mechanism for brown rot that is controlled by differential expression rather than microenvironmental gradients. This mechanism likely results in an oxidative pretreatment of lignocellulose, possibly facilitated by expansin- and pectinase-assisted cell wall swelling, before cellulases and hemicellulases are deployed for polysaccharide depolymerization.

  8. Developing a prebiotic yogurt enriched by red bean powder: Microbiological, physi-cochemical and sensory aspect

    Science.gov (United States)

    Setiyoningrum, Fitri; Priadi, Gunawan; Afiati, Fifi

    2017-01-01

    Red bean is widely known as a prebiotic, but addition of it into yogurt is rare. The aim of this study was to evaluate the effect of red bean powder addition on microbiological, physicochemical, and sensory of yogurt. Skim milk also added into yogurt formula to optimize the quality of yogurt. The treatment of concentrations, either red bean and skim milk, did not effect on the viability of lactic acid bacteria of yogurt (8.35 - 9.03 log cfu/ml) and the crude fiber content (0.04 - 0.08%). The increasing of red bean concentration induced the increase of protein content significantly. The increasing of level concentration, either red bean or skim milk, induced the increasing of carbohydrate content. Opposite phenomenon was occurred on the moisture content. Based on the sensory test result, the addition of 3% of skim milk and 2%of red bean into yogurt still accepted by panelist.

  9. Distinction of Ecuadorian varieties of fermented cocoa beans using Raman spectroscopy.

    Science.gov (United States)

    Vargas Jentzsch, Paul; Ciobotă, Valerian; Salinas, Wilson; Kampe, Bernd; Aponte, Pedro M; Rösch, Petra; Popp, Jürgen; Ramos, Luis A

    2016-11-15

    Cocoa (Theobroma cacao) is a crop of economic importance. In Ecuador, there are two predominant cocoa varieties: National and CCN-51. The National variety is the most demanded, since its cocoa beans are used to produce the finest chocolates. Raman measurements of fermented, dried and unpeeled cocoa beans were performed using a handheld spectrometer. Samples of the National and CCN-51 varieties were collected from different provinces and studied in this work. For each sample, 25 cocoa beans were considered and each bean was measured at 4 different spots. The most important Raman features of the spectra were assigned and discussed. The spectroscopic data were processed using chemometrics, resulting in a distinction of varieties with 91.8% of total accuracy. Differences in the average Raman spectra of cocoa beans from different sites but within the same variety can be attributed to environmental factors affecting the cocoa beans during the fermentation and drying processes.

  10. Pectic Enzyme Activities of Bacteria Associated with Rotted Onions (Allium cepa).

    Science.gov (United States)

    Obi, S K; Umezurike, G M

    1981-10-01

    The aerobic bacteria associated with soft rot in onions (Allium cepa) were isolated and identified as a Vibrio sp., Micrococcus epidermidis, Pseudomonas cepacia, an Acinetobacter sp., a Xanthomonas sp., Bacillus polymyxa, and Bacillus megaterium. With the cup-plate assay method, no pectin hydrolase could be detected from any of these isolates when they were cultured in pectin medium, but lyase and pectinesterases were detectable. Onion tissue cultures showed pectin hydrolase activity for P. cepacia and B. polymyxa and lyase and pectinesterase activities for all of the isolates, usually at higher levels of activity than those of the pectin medium culture filtrates. In both culture media, Vibrio sp. showed the highest lyase and pectinesterase activities. In the viscometric test, all of the isolates achieved at least a 50% decrease in viscosity for lyase enzyme, with M. epidermidis and Vibrio sp. recording viscosity decreases as high as 83%. The ability to cause soft rot in onion bulbs was demonstrated by P. cepacia and Xanthomonas sp. Benzoic acid at a concentration of 0.8 mg/ml caused total suppression of enzyme production, whereas sodium benzoate at this concentration reduced pectinesterase production by 71% and lyase production by 72%. The possible use of these preservatives in the control of soft rot in onions is noted.

  11. Isolation and identification of Sclerotinia stem rot causal pathogen in Arabidopsis thaliana

    Institute of Scientific and Technical Information of China (English)

    Ai-rong WANG; Wen-wei LIN; Xiao-ting CHEN; Guo-dong LU; Lie ZHOU; Zong-hua WANG

    2008-01-01

    A new stem rot disease is found to occur naturally on Arabidopsis plants in greenhouses of Fuzhou, China. In order to identify its pathogen, we conducted a series of fimgal isolation and purification, plant reinoculation, and ascus and ascospore induction from the sclerotia. The isolate caused typical water-soaked lesions after reinoeulation and produced sclerotia both on Arabidopsis plants and culture medium plates, and the sclerotia could be induced to produce discal apothecia and 8 binucleate ascospores per ascus. These disease symptom and fungal morphology data revealed that the fungus Sclerotinia sclerotiorum (Lib.) de Bary was the pathogen for Arabidopsis stem rot. To confirm this, we further amplified its large subunit ribosomal DNA (LSU rDNA) by polymerase chain reaction (PCR), and compared the sequence with the known LSU rDNA sequences in GenBank. The results show that the sequence shares the highest identities with the LSU rDNAs of different S. sclerotiorum strains. Taking all these data together, we concluded that the fungus that caused the Arabidopsis stem rot is S. sclerotiorum (Lib.) de Bary. This is the first report that Arabidopsis is naturally infected by S. sclerotiorum.

  12. Bud Rot Caused by Phytophthora palmivora: A Destructive Emerging Disease of Oil Palm.

    Science.gov (United States)

    Torres, G A; Sarria, G A; Martinez, G; Varon, F; Drenth, A; Guest, D I

    2016-04-01

    Oomycetes from the genus Phytophthora are among the most important plant pathogens in agriculture. Epidemics caused by P. infestans precipitated the great Irish famine and had a major impact on society and human history. In the tropics, P. palmivora is a pathogen of many plant species including cacao (Theobroma cacao), citrus (Citrus sp.), durian (Durio zibethines), jackfruit (Artrocarpus heterophyllus), rubber (Hevea brasiliensis), and several palm species including coconut (Cocos nucifera), and the African oil palm (Elaeis guineensis) as determined recently. The first localized epidemics of bud rot in oil palm in Colombia were reported in 1964. However, recent epidemics of bud rot have destroyed more than 70,000 ha of oil palm in the Western and Central oil palm growing regions of Colombia. The agricultural, social, and economic implications of these outbreaks have been significant in Colombia. Identification of the pathogen after 100 years of investigating the disease in the world enabled further understanding of infection, expression of a range of symptoms, and epidemiology of the disease. This review examines the identification of P. palmivora as the cause of bud rot in Colombia, its epidemiology, and discusses the importance of P. palmivora as a major threat to oil palm plantings globally.

  13. Control of Root Rot and Wilt Diseases of Roselle under Field Conditions.

    Science.gov (United States)

    Hassan, Naglaa; Elsharkawy, Mohsen Mohamed; Shimizu, Masafumi; Hyakumachi, Mitsuro

    2014-12-01

    Roselle (Hibiscus sabdariffa L.) is one of the most important medicinal crops in many parts of the world. In this study, the effects of microelements, antioxidants, and bioagents on Fusarium oxysporum, F. solani, and Macrophomina phaseolina, the causal pathogens of root rot and wilt diseases in roselle, were examined under field conditions. Preliminary studies were carried out in vitro in order to select the most effective members to be used in field control trials. Our results showed that microelements (copper and manganese), antioxidants (salicylic acid, ascorbic acid, and EDTA), a fungicide (Dithane M45) and biological control agents (Trichoderma harzianum and Bacillus subtilis) were significantly reduced the linear growth of the causal pathogens. Additionally, application of the previous microelements, antioxidants, a fungicide and biological control agents significantly reduced disease incidence of root rot and wilt diseases under field conditions. Copper, salicylic acid, and T. harzianum showed the best results in this respect. In conclusion, microelements, antioxidants, and biocontrol agents could be used as alternative strategies to fungicides for controlling root rot and wilt diseases in roselle.

  14. Control of postharvest Botrytis fruit rot of strawberry by volatile organic compounds of Candida intermedia.

    Science.gov (United States)

    Huang, R; Li, G Q; Zhang, J; Yang, L; Che, H J; Jiang, D H; Huang, H C

    2011-07-01

    A study was conducted to identify volatile organic compounds or volatiles produced by Candida intermedia strain C410 using gas chromatography-mass spectrometry, and to determine efficacy of the volatiles of C. intermedia in suppression of conidial germination and mycelial growth of Botrytis cinerea and control of Botrytis fruit rot of strawberry. Results showed that, among 49 volatiles (esters, alcohols, alkenes, alkanes, alkynes, organic acids, ketones, and aldehydes) identified from C. intermedia cultures on yeast extract peptone dextrose agar, two compounds, 1,3,5,7-cyclooctatetraene and 3-methyl-1-butanol, were the most abundant. Synthetic chemicals of 1,3,5,7-cyclooctatetraene; 3-methyl-1-butanol; 2-nonanone; pentanoic acid, 4-methyl-, ethyl ester; 3-methyl-1-butanol, acetate; acetic acid, pentyl ester; and hexanoic acid, ethyl ester were highly inhibitory to conidial germination and mycelial growth of B. cinerea. Inhibition of conidial germination and mycelial growth of B. cinerea by volatiles of C. intermedia was also observed. Meanwhile, results showed that incidence and severity of Botrytis fruit rot of strawberry was significantly (P fruit to the volatiles from C. intermedia cultures or C. intermedia-infested strawberry fruit. These results suggest that the volatiles of C. intermedia C410 are promising biofumigants for control of Botrytis fruit rot of strawberry.

  15. Identification of sources of resistance to anthracnose stalk rot in maize

    Directory of Open Access Journals (Sweden)

    Alessandro Nicoli

    Full Text Available ABSTRACT: Adoption of resistant cultivars is the primary measure used to control anthracnose stalk rot. The goal of this study was to identify maize-resistant genotypes to anthracnose stalk rot, which are similar to the hybrid 2B710. Experiments were performed at Embrapa Maize and Sorghum experimental fields in Brazil. The first experimental trial evaluated 234 maize lines as well as two commercials hybrids, BRS1010 (susceptible and 2B710 (resistant. Artificial inoculations were performed with a strain at the blister (R2 phase, and evaluation of disease severity was performed after 30 days. The second experimental trial evaluated 48 maize lines and hybrids, inoculated with two Colletotrichum graminicola strains. In the first trial, eight resistance groups were formed, and the last lines were more resistant, as was the hybrid 2B710, with values between 11.50% and 23.0% of severity. In the second trial, there was an interaction between the two factors, lines and isolates, and the lines often showed the same reaction features as those obtained in the first trial. However, the disease severity was higher for most lines, even when using other isolates. These lines with effective levels of resistance could be used in future studies of inheritance, in programs to develop hybrids, and to identify molecular markers associated with resistance to anthracnose stalk rot in maize.

  16. Lettuce genotype resistance to "soft rot" caused by Pectobacterium carotovorum subsp. carotovorum

    Directory of Open Access Journals (Sweden)

    Kátia Cilene da Silva Felix

    2014-08-01

    Full Text Available Soft rot, caused by Pectobacterium carotovorum subsp. carotovorum (Pcc, is the main bacterial disease affecting lettuce (Lactuca sativa L. crops in Brazil and leads to significant yield losses. This study aimed to assess the reaction of lettuce genotypes to soft rot induced by a virulent isolate and the stability of the resistance to three isolates varying in virulence. Using a descriptive ordinal scale ranging from 1 to 9 a classification system was defined: class 1 = resistant (R: severity (Sev 3.5. Of the 41 tested genotypes, 14 were classified as MR and 27 as S when inoculated with a Pcc isolate of intermediate virulence. Eleven of these genotypes (four S and seven MR were selected to test their resistance stability against three other isolates with an increasing degree of virulence (Pcc36 < Pcc-A1.1 < Pcc-23. Out of the 11 genotypes eight retained the original classification and three moved from S to MR resistant class when challenged with the least virulent isolate. Vitória de Santo Antão was the only genotype classified as MR for all tested isolates and is a promising candidate for durable soft rot resistance breeding.

  17. Fourier Transform Infrared Radiation Spectroscopy Applied for Wood Rot Decay and Mould Fungi Growth Detection

    Directory of Open Access Journals (Sweden)

    Bjørn Petter Jelle

    2012-01-01

    Full Text Available Material characterization may be carried out by the attenuated total reflectance (ATR Fourier transform infrared (FTIR radiation spectroscopical technique, which represents a powerful experimental tool. The ATR technique may be applied on both solid state materials, liquids, and gases with none or only minor sample preparations, also including materials which are nontransparent to IR radiation. This facilitation is made possible by pressing the sample directly onto various crystals, for example, diamond, with high refractive indices, in a special reflectance setup. Thus ATR saves time and enables the study of materials in a pristine condition, that is, the comprehensive sample preparation by pressing thin KBr pellets in traditional FTIR transmittance spectroscopy is hence avoided. Materials and their ageing processes, both ageing by natural and accelerated climate exposure, decomposition and formation of chemical bonds and products, may be studied in an ATR-FTIR analysis. In this work, the ATR-FTIR technique is utilized to detect wood rot decay and mould fungi growth on various building material substrates. An experimental challenge and aim is to be able to detect the wood rot decay and mould fungi growth at early stages when it is barely visible to the naked eye. Another goal is to be able to distinguish between various species of fungi and wood rot.

  18. Enzymatic saccharification of biologically pretreated Pinus densiflora using enzymes from brown rot fungi.

    Science.gov (United States)

    Lee, Jae-Won; Kim, Ho-Yong; Koo, Bon-Wook; Choi, Don-Ha; Kwon, Mi; Choi, In-Gyu

    2008-08-01

    Enzymatic saccharification of lignocellulosic biomass was performed using culture filtrates of brown rot fungi including Gloeophyllum sepiarium, Fomitopsis pinicola, and Laetiporus sulphureus. Biological treatment with white rot fungi was used as pretreatment prior to enzymatic saccharification. Endoglucanase, beta-glucosidase, xylanase and cellobiohydrolase activities were determined from concentrated culture filtrates of the brown rot fungi. L. sulphureus has the highest endoglucanase, beta-glucosidase, and xylanase activities, and F. pinicola has the highest cellobiohydrolase activity. When enzymes from L. sulphureus were used along with the lignocellulosic biomass pretreated with Stereum hirsutum as the carbon source, the total sugar yield was 11.36 mg/0.25 g of dry weight biomass, with the highest activities of cellulase and hemicellulase. In order to increase the sugar yield, the enzymes from L. sulphureus were mixed with those from F. pinicola, which showed high cellobiohydrolase activity. This caused an increase in the sugar yield from 11.36 mg to 15.22 mg. When temperature was increased to 50 degrees C, the total sugar yield increased to 17.74 mg for the same reaction time. The crystallinity of lignocellulosic biomass decreased from 68.4% to 60.2%, when lignocellulosic biomass pretreated with S. hirsutum was hydrolyzed using enzymes from L. sulphureus.

  19. Isolation, Characterization, and Identification of Biological Control Agent for Potato Soft Rot in Bangladesh

    Directory of Open Access Journals (Sweden)

    M. M. Rahman

    2012-01-01

    Full Text Available A total of 91 isolates of probable antagonistic bacteria of potato soft rot bacterium Erwinia carotovora subsp. carotovora (Ecc were extracted from rhizospheres and endophytes of various crop plants, different soil varieties, and atmospheres in the potato farming areas of Bangladesh. Antibacterial activity of the isolated probable antagonistic bacteria was tested in vitro against the previously identified most common and most virulent soft rot causing bacterial strain Ecc P-138. Only two isolates E-45 and E-65 significantly inhibited the in vitro growth of Ecc P-138. Physiological, biochemical, and carbon source utilization tests identified isolate E-65 as a member of the genus Bacillus and the isolate E-45 as Lactobacillus sp. The stronger antagonistic activity against Ecc P-138 was found in E-65 in vitro screening and storage potatoes. E-65 reduced the soft rot infection to 22-week storage potatoes of different varieties by 32.5–62.5% in model experiment, demonstrating its strong potential to be used as an effective biological control agent for the major pectolytic bacteria Ecc. The highest (62.5% antagonistic effect of E-65 was observed in the Granola and the lowest (32.7% of that was found in the Cardinal varieties of the Bangladeshi potatoes. The findings suggest that isolate E-65 could be exploited as a biocontrol agent for potato tubers.

  20. Purification and characterization of an alkaline phosphatase induced by phosphorus starvation in common bean (Phaseolus vulgaris L.) roots

    Energy Technology Data Exchange (ETDEWEB)

    Morales, L.; Gutierrez, N.; Maya, V.; Parra, C.; Martinez B, E.; Coello, P., E-mail: pcoello@servidor.unam.mx [UNAM, Facultad de Quimica, Departamento de Bioquimica, Ciudad Universitaria, 04510 Mexico D. F. (Mexico)

    2012-07-01

    Two phosphatase isoforms from roots of the common bean (Phaseolus vulgaris L.) showed an increase in activity in response to phosphate deficiency. One of them (APIII) was chosen for further purification through ionic exchange chromatography and preparative electrophoresis. The estimated molecular mass of APIII was 35 kDa by both SDS-Page and gel filtration analyses, suggesting a monomeric form of the active enzyme. The phosphatase was classified as an alkaline phosphatase based on the requirement of ph 8 for optimum catalysis. It not only exhibited broad substrate specificity, with the most activity against pyrophosphate, but also effectively catalyzed the hydrolysis of polyphosphate, glucose-1-phosphate and phospho enol-pyruvate. Activity was completely inhibited by molybdate, vanadate and phosphate but was only partially inhibited by fluoride. Although divalent cations were not essential for the pyro phosphatase activity of this enzyme, the hydrolysis of pyro phosphatase increased substantially in the presence of Mg{sup 2+}.

  1. Study on Drying Edible Soya-bean Oil Using Solar Energy

    Institute of Scientific and Technical Information of China (English)

    LIU Shengyong; LIU Peng; SHEN Xiaozhen; XU Guizhuan; SU Chaojie; CAI Xianjie

    2010-01-01

    Soya-bean oil(bean dregs)was dried in a solar energy drying system.Characteristics of the process were measured and the corresponding curves were done.The practicability of this process has been discussed.The results showed that the solar drying system could completely meet technological requirements of drying soy-bean oil,and it was feasible in technology to use the solar drying system to dry the vegetable oil.

  2. CULTIVAR RELEASE-IAC-Galante and IAC-Centauro: special common bean types

    Directory of Open Access Journals (Sweden)

    Sérgio Augusto Morais Carbonell

    2008-01-01

    Full Text Available Common bean types with pinkish and light brown teguments were predominant in Brazil before 1970, until therelease of the Carioca common bean. To avoid that these common bean types sink into oblivion, the Instituto AgronômicoCampinas applied for the registration of two cultivars by the MAPA/RNC: IAC-Galante (pinkish and IAC-Centauro (lightbrown, with high yield and resistance to anthracnose and common mosaic.

  3. The Effect of Cocoa Beans Heavy and Trace Elements on Safety and Stability of Confectionery Products

    Directory of Open Access Journals (Sweden)

    Vītola Vineta

    2016-06-01

    Full Text Available The aim of the study was to evaluate cocoa beans quality produced in Cameroon, Ecuador, Nigeria and Ghana from safety position determining heavy and trace metals concentration and evaluating the oxidative stability of confectionery products prototypes (trials with analysing cocoa beans. For evaluation of oxidative stability of confectionery products, the main ingredients - butter and cocoa beans kernels were tested making trials as milk chocolate prototype.

  4. Performance of Rotary Cutter Type Breaking Machine for Breakingand Deshelling Cocoa Roasted Beans

    OpenAIRE

    2005-01-01

    Conversion of cocoa beans to chocolate product is, therefore, one of the promising alternatives to increase the value added of dried cocoa beans. On the other hand, the development of chocolate industry requires an appropriate technology that is not available yet for small or medium scale of business. Breaking and deshelling cocoa roasted beans is one important steps in cocoa processing to ascertain good chocolate quality. The aim of this research is to study performance of rotary cutter type...

  5. An effective virus-based gene silencing method for functional genomics studies in common bean

    Directory of Open Access Journals (Sweden)

    Kachroo Aardra

    2011-06-01

    Full Text Available Abstract Background Common bean (Phaseolus vulgaris L. is a crop of economic and nutritious importance in many parts of the world. The lack of genomic resources have impeded the advancement of common bean genomics and thereby crop improvement. Although concerted efforts from the "Phaseomics" consortium have resulted in the development of several genomic resources, functional studies have continued to lag due to the recalcitrance of this crop for genetic transformation. Results Here we describe the use of a bean pod mottle virus (BPMV-based vector for silencing of endogenous genes in common bean as well as for protein expression. This BPMV-based vector was originally developed for use in soybean. It has been successfully employed for both protein expression and gene silencing in this species. We tested this vector for applications in common bean by targeting common bean genes encoding nodulin 22 and stearoyl-acyl carrier protein desaturase for silencing. Our results indicate that the BPMV vector can indeed be employed for reverse genetics studies of diverse biological processes in common bean. We also used the BPMV-based vector for expressing the green fluorescent protein (GFP in common bean and demonstrate stable GFP expression in all common bean tissues where BPMV was detected. Conclusions The availability of this vector is an important advance for the common bean research community not only because it provides a rapid means for functional studies in common bean, but also because it does so without generating genetically modified plants. Here we describe the detailed methodology and provide essential guidelines for the use of this vector for both gene silencing and protein expression in common bean. The entire VIGS procedure can be completed in 4-5 weeks.

  6. BEANS - a software package for distributed Big Data analysis

    CERN Document Server

    Hypki, Arkadiusz

    2016-01-01

    BEANS software is a web based, easy to install and maintain, new tool to store and analyse data in a distributed way for a massive amount of data. It provides a clear interface for querying, filtering, aggregating, and plotting data from an arbitrary number of datasets. Its main purpose is to simplify the process of storing, examining and finding new relations in the so-called Big Data. Creation of BEANS software is an answer to the growing needs of the astronomical community to have a versatile tool to store, analyse and compare the complex astrophysical numerical simulations with observations (e.g. simulations of the Galaxy or star clusters with the Gaia archive). However, this software was built in a general form and it is ready to use in any other research field or open source software.

  7. Italian Common Bean Landraces: History, Genetic Diversity and Seed Quality

    Directory of Open Access Journals (Sweden)

    Angela R. Piergiovanni

    2010-05-01

    Full Text Available The long tradition of common bean cultivation in Italy has allowed the evolution of many landraces adapted to restricted areas. Nowadays, in response to market demands, old landraces are gradually being replaced by improved cultivars. However, landraces still survive in marginal areas of several Italian regions. Most of them appear severely endangered with risk of extinction due to the advanced age of the farmers and the socio-cultural context where they are cultivated. The present contribution is an overview of the state of the art about the knowledge of Italian common bean germplasm, describing the most important and recent progresses made in its characterization, including genetic diversity and nutritional aspects.

  8. Locust bean gum: Exploring its potential for biopharmaceutical applications

    Directory of Open Access Journals (Sweden)

    Marita Dionísio

    2012-01-01

    Full Text Available Polysaccharides have been finding, in the last decades, very interesting and useful applications in the biomedical and, specifically, in the biopharmaceutical field. Locust bean gum is a polysaccharide belonging to the group of galactomannans, being extracted from the seeds of the carob tree (Ceratonia siliqua. This polymer displays a number of appealing characteristics for biopharmaceutical applications, among which its high gelling capacity should be highlighted. In this review, we describe critical aspects of locust bean gum, contributing for its role in biopharmaceutical applications. Physicochemical properties, as well as strong and effective synergies with other biomaterials are described. The potential for in vivo biodegradation is explored and the specific biopharmaceutical applications are discussed.

  9. Broadly Neutralizing Antibodies for HIV Eradication.

    Science.gov (United States)

    Stephenson, Kathryn E; Barouch, Dan H

    2016-02-01

    Passive transfer of antibodies has long been considered a potential treatment modality for infectious diseases, including HIV. Early efforts to use antibodies to suppress HIV replication, however, were largely unsuccessful, as the antibodies that were studied neutralized only a relatively narrow spectrum of viral strains and were not very potent. Recent advances have led to the discovery of a large portfolio of human monoclonal antibodies that are broadly neutralizing across many HIV-1 subtypes and are also substantially more potent. These antibodies target multiple different epitopes on the HIV envelope, thus allowing for the development of antibody combinations. In this review, we discuss the application of broadly neutralizing antibodies (bNAbs) for HIV treatment and HIV eradication strategies. We highlight bNAbs that target key epitopes, such as the CD4 binding site and the V2/V3-glycan-dependent sites, and we discuss several bNAbs that are currently in the clinical development pipeline.

  10. Efficacy of Locust Beans Husk Char in Heavy Metal Sequestration

    OpenAIRE

    Ademola Ayodeji Ajayi-Banji; Temitayo Ewemoje; Adeniyi Ajimo

    2016-01-01

    Most solid waste management schemes minimally consider low concentration biodegradable agricultural waste management, though the environmental impact of this waste category is significant over a time frame. The column-mode study seeks to address the issue by suggesting potential utilisation of post-harvest waste for heavy metal sequestering. Locust beans husk char of 100 and 200 g was employed to inspect removal efficiency, isotherm and kinetic models of some heavy metals at 30, 60, 90, 120 a...

  11. Nodule senescence and biomass components in common bean cultivars

    OpenAIRE

    Fabián Fernández Luqueño; David Espinosa Victoria; Antonio Munive; Langen Corlay Chee; Luis M. Serrano Covarrubias

    2008-01-01

    Most legumes establish mutualistic symbiotic relationships with atmospheric nitrogen-fixing bacteria (rhizobia), giving origin to nodules. Nodules exhibit natural or induced aging which coincides with the drop in nitrogenase activity at the flowering period or at the pod filling stage. In this research, the onset of nodule senescence (NS) was evaluated under greenhouse conditions in five common bean (Phaseolus vulgaris L.) cultivars of two growth habits, determined (Type I) and indeterminate ...

  12. 力争第二的Coffee Bean

    Institute of Scientific and Technical Information of China (English)

    蔡正蓁

    2003-01-01

    一个小雨的午后,在新加坡繁华的Orchard大街上的连锁咖啡店“Coffee Bean & Tea Leaf”里,维克多·沙宣从他的座位上一跃而起,脱口而出:“下雨了,我得把屋顶打开。”短短几秒钟之内,在天井上方。

  13. A better bean. Reports from the field -- Latin America.

    Science.gov (United States)

    Powell, D

    1997-01-01

    Researchers from the Colegio de Postgraduados, in partnership with the University of Guelph in Canada, have used horizontal resistance breeding, without the aid of pesticides, to more than triple the yield of locally grown black beans. J.E. Vanderplank, a South African plant pathologist, coined the terms "vertical" and "horizontal" for the types of crop plant resistance in 1963. The former involves a single gene and breaks down when new pathogens appear; the latter involves several genes and is a more durable form of resistance to disease or to insects. Enhancing vertical resistance, which is based on classical Mendelian breeding techniques, requires crossing a wild plant that possesses the desired gene with a cultivar to create a hybrid; the hybrid offspring are then backcrossed with the cultivar parent for several generations until a hybrid is created that is identical to the cultivar, except for the wild parent's resistance gene. In horizontal resistance breeding, the best individuals from each generation are selected and bred with each other. According to Raoul Robinson, a Canadian crop scientist and member of the plant breeding team supported by IDRC, breeding to enhance vertical resistance, or under the protection of insecticides and fungicides, has caused the level of horizontal resistance to decline and plant susceptibility to parasites to increase. Dr. Robinson and Dr. Roberto Garcia Espinosa (the Mexican project manager) began their work using horizontal resistance breeding in black beans in 1991. Yields of 1500 kg/hectare were achieved in two breeding cycles (two years) without the use of pesticides. The average bean yield in the Mixteca region of Mexico is 400 kg/hectare with the use of pesticides. The 200,000 small farmers in the area cultivate over 300,000 hectares, 40,000 of which are beans. The breeding techniques used in this project can be applied to other crops and in other countries.

  14. Morphology and viability of castor bean genotypes pollen grains

    OpenAIRE

    Maria Selma Alves Silva Diamantino; Maria Angélica Pereira de Carvalho Costa; Taliane Leila Soares; Daniel Vieira Morais; Simone Alves Silva; Everton Hilo Souza

    2016-01-01

    The objective of this work was to characterize the morphology and viability of the pollen of 15 genotypes of castor bean (Ricinus communis L.) and to generate information that can assist in the selection of highly promising male parents for future use in genetic improvement programs aimed at producing seeds for oil extraction. Acetolysis and scanning electron microscopy was used to characterize the morphology of the pollen. The viability of the pollen grains was estimated by in vitro germinat...

  15. Morphology and viability of castor bean genotypes pollen grains

    OpenAIRE

    Diamantino,Maria Selma Alves Silva; Costa,Maria Angélica Pereira de Carvalho; Soares,Taliane Leila; Morais,Daniel Vieira; Silva,Simone Alves; Souza,Everton Hilo de

    2016-01-01

    ABSTRACT. The objective of this work was to characterize the morphology and viability of the pollen of 15 genotypes of castor bean (Ricinus communis L.) and to generate information that can assist in the selection of highly promising male parents for future use in genetic improvement programs aimed at producing seeds for oil extraction. Acetolysis and scanning electron microscopy was used to characterize the morphology of the pollen. The viability of the pollen grains was estimated by in vitr...

  16. Mung bean decreases plasma cholesterol by up-regulation of CYP7A1.

    Science.gov (United States)

    Yao, Yang; Hao, Liu; Shi, Zhenxing; Wang, Lixia; Cheng, Xuzhen; Wang, Suhua; Ren, Guixing

    2014-06-01

    Our results affirmed that supplementation of 1 or 2% mung bean could decrease plasma total cholesterol and triacylglycerol level. Mung bean increased mRNA 3-hydroxy-3-methyl-glutaryl-coenzyme A reductase. Most importantly, mung bean increased not only the protein level of cholesterol-7α-hydroxylase (CYP7A1) but also mRNA CYP7A1. It was concluded that the hypocholesterolemic activity of mung bean was most probable mediated by enhancement of bile acid excretion and up-regulation of CYP7A1.

  17. Navy Bean Flour Particle Size and Protein Content Affect Cake Baking and Batter Quality(1).

    Science.gov (United States)

    Singh, Mukti; Byars, Jeffrey A; Liu, Sean X

    2015-06-01

    Whole navy bean flour and its fine and coarse particle size fractions were used to completely replace wheat flour in cakes. Replacement of wheat flour with whole bean flour significantly increased the protein content. The protein content was adjusted to 3 levels with navy bean starch. The effect of navy bean flour and its fractions at 3 levels of protein on cake batter rheology and cake quality was studied and compared with wheat flour samples. Batters prepared from navy bean flour and its fractions had higher viscosity than the cake flour. Reducing the protein content by addition of starch significantly lowered the viscosity of cake batters. The whole navy bean flour and coarse bean fraction cakes were softer than cakes made with wheat flour but had reduced springiness. Principal component analysis showed a clear discrimination of cakes according to protein. It also showed that low protein navy bean flour cakes were similar to wheat flour cakes. Navy bean flour with protein content adjusted to the level of cake (wheat) flour has potential as a healthy alternative in gluten-free cakes.

  18. Development and reproduction of Bemisia tabaci (Homoptera: Aleyrodidae) on three bean species

    Institute of Scientific and Technical Information of China (English)

    PETERD.MUSA; SHUN-XIANGREN

    2005-01-01

    The development, survivorship and reproduction of Bemisia tabaci B-biotype on three bean species were studied at 26 ± 1 ℃ in the laboratory. The developmental periods from egg to adult varied from 27.80 days on garden beans to 18.20 days on soybeans. The survivorship from egg to adult on soybeans, cowpeas and garden beans was 77.14, 70.14 and 64.28%, respectively. The average longevity of female adults ranged from 12.30 days on soybeans to 9.80 days on garden beans, and the oviposition of B. tabaci varied from 160.85 eggs on soybeans to 98.00 eggs on garden beans. Life table parameters were calculated as biological attributes for Bemisia tabaci populations fed on three bean species. The results indicated that the intrinsic rate of increase (rm), the finite rate of increase ( λ ) and net reproductive rate (R0) were high for populations fed on soybeans, with values of 0.1857,1.2041 and 82.1576, respectively. The corresponding values were less for populations fed on garden beans, with values of 0.1097, 1.1159 and 31.2661, respectively. The parametric values for cowpeas were intermediate between soybeans and garden beans but no significant difference were observed for the rm values for soybeans and cowpeas. Experimental evidence in our investigation indicated that Bemisia tabaci is best adapted and shows the greatest preference for soybean of the three bean species tested in this study.

  19. 1H NMR study of fermented cocoa (Theobroma cacao L.) beans.

    Science.gov (United States)

    Caligiani, Augusta; Acquotti, Domenico; Cirlini, Martina; Palla, Gerardo

    2010-12-08

    This study reports for the first time the metabolic profile of cocoa (Theobroma cacao L.) beans using the (1)H NMR technique applied to polar extracts of fermented cocoa beans. The simultaneous detection and quantification of amino acids, polyalcohols, organic acids, sugars, methylxanthines, catechins, and phenols were obtained by assigning the major signals of the spectra for different varieties of cocoa beans (Forastero, Criollo, and Trinitario) from different countries (Ecuador, Ghana, Grenada, and Trinidad). The data set obtained, representative of all classes of soluble compounds of cocoa, was useful to characterize the fermented cocoa beans as a function of the variety and geographic origin.

  20. COMPETITIVE ABILITY OF MAIZE IN MIXTURE WITH CLIMBING BEAN IN ORGANIC FARMING

    OpenAIRE

    Bavec, Franc; Živec, Urška; Grobelnik Mlakar, Silva; Bavec , Martina; Radics , Laszlo

    2005-01-01

    Intercropped crops represent an important production system in organic farming, especially maize/climbing bean mixture due to its high content of protein in bean seeds for human diet, and producing silage for ruminants. To test this hypothesis, the effects of maize (Zea mays L.) sown as a sole crop and maize/climbing bean (Phaseolus vulgaris L. cv. Cipro) mixtures on maize plant height, maize leaf area index, bean leaf area index and grain yield were investigated in field experiments on an o...

  1. Impact of Molecular Technologies on Faba Bean (Vicia faba L. Breeding Strategies

    Directory of Open Access Journals (Sweden)

    Tao Yang

    2012-07-01

    Full Text Available Faba bean (Vicia faba L. is a major food and feed legume because of the high nutritional value of its seeds. The main objectives of faba bean breeding are to improve yield, disease resistance, abiotic stress tolerance, seed quality and other agronomic traits. The partial cross-pollinated nature of faba bean introduces both challenges and opportunities for population development and breeding. Breeding methods that are applicable to self-pollinated crops or open-pollinated crops are not highly suitable for faba bean. However, traditional breeding methods such as recurrent mass selection have been established in faba bean and used successfully in breeding for resistance to diseases. Molecular breeding strategies that integrate the latest innovations in genetics and genomics with traditional breeding strategies have many potential applications for future faba bean cultivar development. Hence, considerable efforts have been undertaken in identifying molecular markers, enriching genetic and genomic resources using high-throughput sequencing technologies and improving genetic transformation techniques in faba bean. However, the impact of research on practical faba bean breeding and cultivar release to farmers has been limited due to disconnects between research and breeding objectives and the high costs of research and implementation. The situation with faba bean is similar to other small crops and highlights the need for coordinated, collaborative research programs that interact closely with commercially focused breeding programs to ensure that technologies are implemented effectively.

  2. Multiple and broad frequency response Gunn diodes

    Science.gov (United States)

    Pilgrim, N. J.; Macpherson, R. F.; Khalid, A.; Dunn, G. M.; Cumming, D. R. S.

    2009-10-01

    Gunn diodes, operating in transit time mode, are usually thought of as incapable of generating power at multiple frequencies or over a broad frequency range. In this paper, we report experimental results showing that these diodes can generate power at several frequencies and, using Monte Carlo simulations of both planar and vertical devices, we offer an explanation of how this unusual behaviour may come into being and suggest possible applications for this novel device.

  3. The potato dry rot causal agent and severity in Ardabil storages and the resistance of cultivars to the disease

    Directory of Open Access Journals (Sweden)

    Leila Khoshnevis

    2016-09-01

    Full Text Available Introduction: Dry rot is one of the most important diseases of potato in storages. The aim of this study was to determine dry rot severity in potato storages of Ardabil, identify the disease causal agents and evaluate some potato cultivars resistance to the disease. Materials and methods: Totally 150 infected samples were collected from thirty nine studied storages in Ardabil. Dry rot severity and the prevalence of infected tubers were determined by surveying three 50 kg bags of potato in the storages. Fungi isolated and purified from the tubers with dry rot symptoms. A factorial design with four replications was applied in order to evaluate the reaction of five potato cultivars to four Fusarium species and determining the resistant one to dry rot. Potato tuber slices were inoculated by conidial suspension of Fusarium species. Four days after inoculation and maintaining in darkness and 25oC, the cultivars susceptibility was  identified. Results: Four species of Fusarium were identified as dry rot causal agents in Ardabil as follows: F. oxysporum, F. poae, F. solani and F. sporotrichioides. There was no significant difference between Fusarium species in pathogenicity. The reaction of cultivars to various Fusarium species was different. Boren had the lowest infection (12.5% and Sabalan showed the highest (98.87 %. Sabalan ،Khavaran ،Agria and hybrid line 3970093 displayed the highest susceptibility to various studied Fusarium species. Discussion and conclusion: Based on the results, Boren is introduced as the most resistant cultivar to Fusarium dry rot and Sabalan, Agria and hybrid line 3970093 as the susceptible ones.

  4. Isolation and Purification of Thiamine Binding Protein from Mung Bean

    Directory of Open Access Journals (Sweden)

    MOHAMAD SADIKIN

    2013-03-01

    Full Text Available Thiamine has fundamental role in energy metabolism. The organs mostly sensitive to the lack of thiamine levels in the body are the nervous system and the heart. Thiamine deficiency causes symptoms of polyneuritis and cardiovascular diseases. Because of its importance in the metabolism of carbohydrates, we need to measure the levels of thiamine in the body fluids by using an easy and inexpensive way without compromising the sensitivity and selectivity. An option to it is thiamine measurement based on the principle of which is analogous to ELISA, in which a thiamine binding protein (TBP act by replacing antibodies. The presence of TBP in several seeds have been reported by previous researchers, but the presence of TBP in mung beans has not been studied. This study was aimed to isolate and purify TBP from mung bean. The protein was isolated from mung bean through salting out by ammonium sulphate of 40, 70, and 90% (w/v. TBP has a negative charge as shown by cellulose acetate electrophoresis. The result obtained after salting out by ammonium sulphate was further purified bymeans of DEAE-cellulose chromatography and affinity chromatography. In precipitation of 90% of salting out method, one peak protein was obtained by using affinity chromatography. The protein was analyzed by SDS PAGE electrophoresis. The result of SDS PAGE electrophoresis showed that TBP has a molecular weight of 72.63 kDa.

  5. Yeast diversity of Ghanaian cocoa bean heap fermentations.

    Science.gov (United States)

    Daniel, Heide-Marie; Vrancken, Gino; Takrama, Jemmy F; Camu, Nicholas; De Vos, Paul; De Vuyst, Luc

    2009-08-01

    The fermentation of the Theobroma cacao beans, involving yeasts, lactic acid bacteria, and acetic acid bacteria, has a major influence on the quality of the resulting cocoa. An assessment of the microbial community of cocoa bean heap fermentations in Ghana resulted in 91 yeast isolates. These were grouped by PCR-fingerprinting with the primer M13. Representative isolates were identified using the D1/D2 region of the large subunit rRNA gene, internal transcribed spacer sequences and partial actin gene sequences leading to the detection of 15 species. Properties of importance for cocoa bean fermentation, namely sucrose, glucose, and citrate assimilation capacity, pH-, ethanol-, and heat-tolerance, were examined for selected isolates. Pichia kudriavzevii (Issatchenkia orientalis), Saccharomyces cerevisiae, and Hanseniaspora opuntiae formed the major components of the yeast community. Hanseniaspora opuntiae was identified conclusively for the first time from cocoa fermentations. Among the less frequently encountered species, Candida carpophila, Candida orthopsilosis, Kodamaea ohmeri, Meyerozyma (Pichia) caribbica, Pichia manshurica, Saccharomycodes ludwigii, and Yamadazyma (Pichia) mexicana were not yet documented from this substrate. Hanseniaspora opuntiae was preferably growing during the earlier phase of fermentation, reflecting its tolerance to low pH and its citrate-negative phenotype, while no specific temporal distribution was recognized for P. kudriavzevii and S. cerevisiae.

  6. Specific pretreatments reduce curing period of vanilla (Vanilla planifolia) beans.

    Science.gov (United States)

    Sreedhar, R V; Roohie, K; Venkatachalam, L; Narayan, M S; Bhagyalakshmi, N

    2007-04-18

    With the aiming of reducing the curing period, effects of pretreatments on flavor formation in vanilla beans during accelerated curing at 38 degrees C for 40 days were studied. Moisture loss, change in texture, levels of flavoring compounds, and activities of relevant enzymes were compared among various pretreatments as well as the commercial sample. Use of naphthalene acetic acid (NAA; 5 mg/L) or Ethrel (1%) with blanching pretreatment resulted in 3-fold higher vanillin on the 10th day. Other flavoring compounds-vanillic acid, p-hydroxybenzoic acid, and p-hydroxybenzaldehyde-fluctuated greatly, showing no correlation with the pretreatments. Scarification of beans resulted in nearly 4- and 3.6-fold higher vanillin formations on the 10th day in NAA- and Ethrel-treated beans, respectively, as compared to control with a significant change in texture. When activities of major relevant enzymes were followed, addition of NAA or Ethrel helped to retain higher levels of cellulase throughout the curing period and higher levels of beta-glucosidase on the 20th day that correlated with higher vanillin content during curing and subsequent periods. Peroxidase, being highest throughout, did not correlate with the change in levels of major flavoring compounds. The pretreatment methods of the present study may find importance for realizing higher flavor formation in a shorter period because the major quality parameters were found to be comparable to those of a commercial sample.

  7. Effect of toasting field beans and of grass-clover

    DEFF Research Database (Denmark)

    Mogensen, Lisbeth; Vestergaard, Jannie Steensig; Fretté, Xavier

    2010-01-01

    The effect of toasting field beans and of grass-clover: maize silage ratio on milk production, milk composition and the sensory quality of the milk was investigated in a 2   2 factorial experiment. Toasting of field beans resulted in lower milk contents of both fat (44.2 versus 46.1 g/kg, P = 0.......02) and protein (33.5 versus 34.2 g/kg, P = 0.008), whereas milk production, urea and somatic cell contents were unaffected compared with the untreated field beans. Increasing the proportion of maize silage (from 9 to 21% of DM) in the ration decreased the content of urea in milk (P = 0.002), whereas milk...... production and milk content of fat and protein were unaffected. Milk from cows fed the high proportion of maize silage had a lower (P = 0.04) long-chain fatty acid content (≥ C18). Furthermore, milk from cows fed the high proportion of maize silage had a lower (13-26%) content of luteine (P = 0.03), 13-cis...

  8. The water budget of rainfed maize and bean intercrop

    Science.gov (United States)

    Walker, S.; Ogindo, H. O.

    Food production in the South African Development Community (SADC) region is predominantly under rainfed conditions and therefore experiences annual fluctuations due to the rainfall variability. Although the staple food of maize ( Zea mays) is commonly grown in the same field as dry beans ( Phaseolus vulgaris) little work has been done to characterize the soil water budget of this intercropping system. The evapotranspiration can theoretically be divided into transpiration from the leaves and evaporation from the soil surface. However, it is difficult to separate the components in field studies. In this paper the Ritchie model is used to estimate the soil surface evaporation using the fractional radiation interception which depends on the crop leaf area. The intercropping system has higher leaf area than the sole crops of both maize and beans in all seasons. Therefore, the soil surface is shaded and the canopy is more dense resulting in a lower soil surface evaporation. The water budget thus gives a higher value of transpiration for the intercrop during each of the four growing seasons. This appears to be due to the complimentary use of the water resources by the maize and bean plants in the intercropping system. This illustrates the ability of the intercrop to use the available soil water in a semi-arid environment more productively. Thus the experience of the small-holder farmers in the SADC region is based on sound physical principles of water use by the two crops.

  9. Castor bean (Ricinus communis L.) as a potential environmental bioindicator.

    Science.gov (United States)

    Mendes, M G; Santos Junior, C D; Dias, A C C; Bonetti, A M

    2015-10-21

    Biomonitoring of air quality using living organisms is a very interesting approach to environmental impact assessment. Organisms with a vast distribution, such as plants, are widely used for these purposes. The castor bean (Ricinus communis L.) is an oleaginous plant that can potentially be used as a bioindicator plant owing to its rapid growth and large leaves, which have a wide surface area of contact with the air and the pollutants therein. This study investigated the the bioindicator potential of the castor bean by performing several tests. We observed statistically significant differences in the concentrations of chlorophyll a and b in the leaves of plants in polluted areas compared to that in the control group plants, which were located in a pollution-free area. Leaves of plants in the former group had higher peroxidase activity and showed a greater buffering ability than those of plants in the control group. The pKa values obtained via buffering capacity tests, revealed the presence of aminoazobenzene (an industrial dye) in leaves of R. communis. Genotoxicity was evaluated through the comet assay technique and revealed that other than some differences in DNA fragmentation, there is no statistically significant difference in this parameter between places analyzed. Our data indicate that R. communis can be a highly useful biological indicator. Further, we hypothesized that the castor bean can be a potential candidate for phytoremediation owing its physiological buffering capacity when exposed to substantial pollution.

  10. Adzuki beans (Vigna angularis seed quality under several drying conditions

    Directory of Open Access Journals (Sweden)

    Osvaldo Resende

    2012-03-01

    Full Text Available This study analyzed the drying process and the seed quality of adzuki beans (Vigna angularis. Grains of adzuki beans, with moisture content of 1.14 (decimal dry basis at harvest and dried until the moisture content of 0.11 (decimal dry basis. were used. Drying was done in an experimental drier maintened at controlled temperatures of 30, 40, 50, 60, and 70 ºC and relative humidity of 52.0, 28.0, 19.1, 13.1, and 6.8%, respectively. Physiological and technological seed quality was evaluated using the germination test, Index of Germination Velocity (IGV, electrical conductivity, and water absorption, respectively. Under the conditions tested in the present study, it can be concluded that drying time for adzuki beans decreases with the higher air temperatures of 60 and 70 ºC, and it affected the physiological and technological seed quality. Thus, to avoid compromising adzuki seeds quality, it is recommended to promote its drying up to 50 ºC.

  11. Evaluation of tolerance to water stress in beans

    Directory of Open Access Journals (Sweden)

    Mauricio Marini Köop

    2012-09-01

    Full Text Available The goal of this study was to evaluate the genotypes of beans, and to sort them into groups that are tolerant and sensitive to water stress, by assessing their morphological characteristics for use in blocks of crosses and the study of gene expression. We evaluated nine bean genotypes: IAPAR 14, IAPAR 81, Pérola, IPR Colibri, IPR Juriti, IPR Chopim, IPR Gralha, and IPR Tiziu IPR Uirapuru. The genotypes were subjected to two irrigation conditions: i irrigation water as needed throughout the culture cycle and ii irrigation water as needed until the appearance of the first bud, followed by no irrigation water for 15 days. The experimental design was in randomized blocks with three replications. The characteristics evaluated were: i plant height; ii stem diameter, iii number of pods per plant, iv number of grains per pod, v root length and vi root dry mass. Stem diameter should not be used to determine if bean genotypes are tolerant or susceptible to water shortages. The results for the Pérola genotype were the highest for most of the characteristics evaluated, and, for this reason, it was classified as tolerant to water stress during flowering. The genotypes IAPAR and 81 IPR Juriti had the lowest results for the most features and were classified as susceptible to water stress during flowering.

  12. Drying of green bean and okra under solar energy

    Directory of Open Access Journals (Sweden)

    İBRAHİM DOYMAZ

    2011-06-01

    Full Text Available In this study, sun drying characteristics of green bean and okra were investigated. Drying experiments were conducted in Iskenderun-Hatay, Turkey. The drying study showed that the times taken for drying of green bean and okra from the initial moisture contents of 89.5% and 88.7% (w.b. to final moisture content of around 15±0.5% (w.b. were 60 and 100 h in open sun drying, respectively. The constant rate period is absent in drying curves. The drying process took place in the falling rate period. The drying data were fitted to thirteen thin-layer drying models. The performance of these models was investigated by comparing the determination of coefficient (R2, reduced chi-square (2 and root mean square error (RMSE between the observed and predicted moisture ratios. Estimations by Approximation of diffusion (for green bean and Midilli et al. models (for okra were in good agreement with the experimental data obtained.

  13. Reduction of antiproliferative capacities, cell-based antioxidant capacities and phytochemical contents of common beans and soybeans upon thermal processing.

    Science.gov (United States)

    Xu, Baojun; Chang, Sam K C

    2011-12-01

    The effects of boiling and steaming processes on the antiproliferative and cellular antioxidant properties, as well as phytochemicals, of two types of common beans (pinto and black beans) and two types of soybeans (yellow and black) were investigated. All thermal-processing methods caused significant (pphytic acid content (PAC) values in all bean types (except for TPC values in pressure-steamed yellow soybeans) as compared to those of the raw beans. All types of uncooked raw beans exhibited cellular antioxidant activities (CAA) in dose-dependent manners. Black soybeans exhibited the greatest CAA, followed by black beans, pinto beans and yellow soybeans. The CAA of cooked beans were generally diminished or eliminated by thermal processing. The hydrophilic extracts from raw pinto beans, black beans and black soybeans exhibited antiproliferation capacities against human gastric (AGS) and colorectal (SW480) cancer cells in dose-dependent manners. The raw yellow soybeans exhibited dose-dependent antiproliferation activities against the SW480 cells. Most of the cooked beans lost their antiproliferation capacities as observed in the raw beans. These results indicate that different processing methods may have various effects on phytochemical profiles and bioactivities. Overall, thermal processing caused a significant reduction of the health-promotion effects of beans.

  14. Impact of fermentation, drying, roasting, and Dutch processing on epicatechin and catechin content of cacao beans and cocoa ingredients.

    Science.gov (United States)

    Payne, Mark J; Hurst, W Jeffrey; Miller, Kenneth B; Rank, Craig; Stuart, David A

    2010-10-13

    Low molecular weight flavan-3-ols are thought to be responsible, in part, for the cardiovascular benefits associated with cocoa powder and dark chocolate. The levels of epicatechin and catechin were determined in raw and conventionally fermented cacao beans and during conventional processing, which included drying, roasting, and Dutch (alkali) processing. Unripe cacao beans had 29% higher levels of epicatechin and the same level of catechin compared to fully ripe beans. Drying had minimal effect on the epicatechin and catechin levels. Substantial decreases (>80%) in catechin and epicatechin levels were observed in fermented versus unfermented beans. When both Ivory Coast and Papua New Guinea beans were subjected to roasting under controlled conditions, there was a distinct loss of epicatechin when bean temperatures exceeded 70 °C. When cacao beans were roasted to 120 °C, the catechin level in beans increased by 696% in unfermented beans, by 650% in Ivory Coast beans, and by 640% in Papua New Guinea fermented beans compared to the same unroasted beans. These results suggest that roasting in excess of 70 °C generates significant amounts of (-)-catechin, probably due to epimerization of (-)-epicatechin. Compared to natural cocoa powders, Dutch processing caused a loss in both epicatechin (up to 98%) and catechin (up to 80%). The epicatechin/catechin ratio is proposed as a useful and sensitive indicator for the processing history of cacao beans.

  15. To Broad-Match or Not to Broad-Match : An Auctioneer's Dilemma ?

    CERN Document Server

    Singh, Sudhir Kumar

    2008-01-01

    We initiate the study of an interesting aspect of sponsored search advertising, namely the consequences of broad match-a feature where an ad of an advertiser can be mapped to a broader range of relevant queries, and not necessarily to the particular keyword(s) that ad is associated with. Starting with a very natural setting for strategies available to the advertisers, and via a careful look through algorithmic and complexity theoretic glasses, we first propose a solution concept called broad match equilibrium(BME) for the game originating from the strategic behavior of advertisers as they try to optimize their budget allocation across various keywords. Next, we consider two broad match scenarios based on factors such as information asymmetry between advertisers and the auctioneer, and the extent of auctioneer's control on the budget splitting. In the first scenario, the advertisers have the full information about broad match and relevant parameters, and can reapportion their own budgets to utilize the extra i...

  16. Temporal and spatial Bean pod mottle virus-induced gene silencing in soybean.

    Science.gov (United States)

    Juvale, Parijat S; Hewezi, Tarek; Zhang, Chunquan; Kandoth, Pramod Kaitheri; Mitchum, Melissa G; Hill, John H; Whitham, Steven A; Baum, Thomas J

    2012-12-01

    Virus-induced gene silencing (VIGS) is a powerful reverse genetics tool in plant science. In this study, we investigated the temporal and spatial silencing patterns achieved by Bean pod mottle virus (BPMV)-based VIGS in soybean using virus constructs targeting green fluorescence protein (GFP). Silencing GFP enabled an in-depth analysis of silencing in soybean tissues over time in a transgenic line constitutively expressing GFP. We discovered evidence for variable GFP silencing based on insert orientation and targeted region in the coding sequence. A 3' sequence in reverse orientation produced the strongest silencing phenotypes. Furthermore, we documented that BPMV VIGS can achieve widespread silencing in a broad range of tissues, including leaves, stems, flowers and roots. Near-complete silencing was attained in leaves and flowers. Although weaker than in shoots, the observed gene silencing in soybean roots will also allow reverse genetics studies in this tissue. When GFP fluorescence was assayed in cross-sections of stems and leaf petioles, near-complete and uniform silencing was observed in all cell types. Silencing was observed from as early as 2 weeks post-virus inoculation in leaves to 7 weeks post-virus inoculation in flowers, suggesting that this system can induce and maintain silencing for significant durations.

  17. Populational survey of arthropods on transgenic common bean expressing the rep gene from Bean golden mosaic virus.

    Science.gov (United States)

    Pinheiro, Patrícia V; Quintela, Eliane D; Junqueira, Ana Maria R; Aragão, Francisco J L; Faria, Josias C

    2014-01-01

    Genetically modified (GM) crops is considered the fastest adopted crop technology in the history of modern agriculture. However, possible undesirable and unintended effects must be considered during the research steps toward development of a commercial product. In this report we evaluated effects of a common bean virus resistant line on arthropod populations, considered as non-target organisms. This GM bean line (named M1/4) was modified for resistance against Bean golden mosaic virus (BGMV) by expressing a mutated REP protein, which is essential for virus replication. Biosafety studies were performed for a period of three years under field conditions. The abundance of some species was significantly higher in specific treatments in a particular year, but not consistently different in other years. A regular pattern was not observed in the distribution of insects between genetically modified and conventional treatments. Data analyses showed that minor differences observed can be attributed to random variation and were not consistent enough to conclude that the treatments were different. Therefore the present study indicates that the relative abundance of species are similar in transgenic and non-transgenic fields.

  18. Botrytis cinerea endopolygalacturonase genes are differentially expressed in various plant tissues

    NARCIS (Netherlands)

    Have, ten A.; Oude Breuil, W.; Wubben, J.P.; Visser, J.; Kan, van J.A.L.

    2001-01-01

    Botrytis cinerea, the causal agent of blight, rot, and gray mold on many plant species, secretes various endopolygalacturonases during all stages of infection. The expression pattern of the encoding genes (Bcpg 1-6) was studied on four hosts: tomato, broad bean, apple, and courgette (also known as z

  19. Solar-Terrestrial Effects on Bean Seed Imbibition

    Science.gov (United States)

    Minorsky, P. V.

    2012-12-01

    Forty years ago, a lively debate ensued amongst biologists concerning the nature of biological rhythms. The "endogenous" school argued that biological rhythms that occur in the absence of any obvious environmental oscillation arise endogenously from within the organism itself. The "exogenous" school on the other hand proposed that subtle and pervasive exogenous factors (e.g., geomagnetic variations or cosmic radiation) underlie most biological rhythms. Much of the debate between the endogenous vs. exogenous schools focused on circadian (circa-24 h) rhythms in particular. The demonstration that circadian rhythms continue in orbiting spacecraft was widely regarded as the final nail in the coffin of the "exogenous" school, and the entire school sank into obscurity. Regrettably, the demise of the "exogenous" school also caused some interesting findings concerning non-circadian rhythms to fall into oblivion as well. Three different research groups, for example, reported that bean (Phaseolus vulgaris) seeds display rhythms in imbibition that have ~7- or ~14-day periodicities. Consistent with the idea of an exogenous synchronizer, these rhythms often occurred synchronously in bean seed populations located 1500 km apart. The present experiment was initiated with the intention of examining whether these ~7 and ~14 d oscillations in imbibition corresponded to oscillations in solar-terrestrial parameters. Three replicates of ~25 g of bean seeds (Phaseolus vulgaris cv. Provider) were weighed daily and placed into beakers containing 200 ml of distilled water at 25° C. This temperature was maintained by nesting the beakers inside larger, temperature-jacketed beakers through which water from a temperature-regulated water bath was circulated. Four hours later the experiments were terminated: the bean seeds were blotted and weighed. Experiments were conducted almost every day between 3 and 7 AM UT from Jan 18, 2007 to Feb 26, 2008. A major difference between the present study and

  20. Effect of raw soya bean particle size on productive performance and digestion of dairy cows.

    Science.gov (United States)

    Naves, A B; Freitas Júnior, J E; Barletta, R V; Gandra, J R; Calomeni, G D; Gardinal, R; Takiya, C S; Vendramini, T H A; Mingoti, R D; Rennó, F P

    2016-08-01

    Differing soya bean particle sizes may affect productive performance and ruminal fermentation due to the level of fatty acid (FA) exposure of the cotyledon in soya bean grain and because the protein in small particles is more rapidly degraded than the protein in large particles, which influence ruminal fibre digestion and the amounts of ruminally undegradable nutrients. The objective of this experiment was to investigate the effects of raw soya bean particle size on productive performance, digestion and milk FA profile of dairy cows. Twelve Holstein cows were assigned to three 4 × 4 Latin squares with 21-day periods. At the start of the experiment, cows were 121 days in milk (DIM) and yielded 30.2 kg/day of milk. Cows were fed 4 diets: (i) control diet (CO), without raw soya bean; (ii) whole raw soya bean (WRS); (iii) cracked raw soya bean in Wiley mill 4-mm screen (CS4); and (iv) cracked raw soya bean in Wiley mill 2-mm screen (CS2). The inclusion of soya beans (whole or cracked) was 200 g/kg on dry matter (DM) basis and partially replaced ground corn and soya bean meal. Uncorrected milk yield and composition were not influenced by experimental diets; however, fat-corrected milk (FCM) decreased when cows were fed soya bean treatments. Soya bean diets increased the intake of ether extract (EE) and net energy of lactation (NEL ), and decreased the intake of DM and non-fibre carbohydrate (NFC). Ruminal propionate concentration was lower in cows fed WRS than cows fed CS2 or CS4. Cows fed cracked raw soya bean presented lower nitrogen in faeces than cows fed WRS. The milk of cows fed WRS, CS2 and CS4 presented higher unsaturated FA than cows fed CO. The addition of raw soya bean in cow diets, regardless of the particle size, did not impair uncorrected milk yield and nutrient digestion, and increased the concentration of unsaturated FA in milk. Cows fed cracked raw soya bean presented similar productive performance to cows fed whole raw soya bean.