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Sample records for birch tree named

  1. Winter Birch Trees

    Science.gov (United States)

    Sweeney, Debra; Rounds, Judy

    2011-01-01

    Trees are great inspiration for artists. Many art teachers find themselves inspired and maybe somewhat obsessed with the natural beauty and elegance of the lofty tree, and how it changes through the seasons. One such tree that grows in several regions and always looks magnificent, regardless of the time of year, is the birch. In this article, the…

  2. Genetic and environmental variation in rust frequency on mature mountain birch trees

    Energy Technology Data Exchange (ETDEWEB)

    Elamo, Pirjo; Saloniemi, Irma; Helander, M.L.; Neuvonen, Seppo [Turku Univ. (Finland). Dept. of Biology) and (Kevo Subarctic Research Inst., Turku (Finland)

    2000-07-01

    This study investigated genetic and environmental variation in the frequency of birch rust, the most important leaf disease of birch species, The same half-sib families of mature mountain birch trees were studied in two areas corresponding to their natural growing habitats over 3 yrs. The frequency of birch rust was examined both in the field and from detached leaves inoculated in the laboratory. The frequency of birch rust varied among the mountain birch families. However, the heritability of birch rust resistance was found to be fairly low, with the heritability of naturally occurring birch rust varying between 0.27 and 0.41. The frequency of birch rust varied highly between the two study areas and among study years. Nevertheless, the relative frequency of birch rust among tree individuals and tree families remained similar and as a result no notable genotype x environment interaction was observed. The field and in vitro results differed with respect to the ranking of birch families by birch rust resistance.

  3. Differential response of aspen and birch trees to heat stress under elevated carbon dioxide

    Energy Technology Data Exchange (ETDEWEB)

    Darbah, Joseph N.T., E-mail: darbah@ohio.ed [School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931 (United States); Department of Environmental and Plant Biology, Ohio University, 315 Porter Hall, Athens, OH 45701 (United States); Sharkey, Thomas D. [Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824 (United States); Calfapietra, Carlo [Institute of Agro-Environmental and Forest Biology (IBAF), National Research Council (CNR), Via Salaria km 29300, 00016 Monterotondo Scalo, Roma (Italy); Karnosky, David F. [School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI 49931 (United States)

    2010-04-15

    The effect of high temperature on photosynthesis of isoprene-emitting (aspen) and non-isoprene-emitting (birch) trees were measured under elevated CO{sub 2} and ambient conditions. Aspen trees tolerated heat better than birch trees and elevated CO{sub 2} protected photosynthesis of both species against moderate heat stress. Elevated CO{sub 2} increased carboxylation capacity, photosynthetic electron transport capacity, and triose phosphate use in both birch and aspen trees. High temperature (36-39 deg. C) decreased all of these parameters in birch regardless of CO{sub 2} treatment, but only photosynthetic electron transport and triose phosphate use at ambient CO{sub 2} were reduced in aspen. Among the two aspen clones tested, 271 showed higher thermotolerance than 42E possibly because of the higher isoprene-emission, especially under elevated CO{sub 2}. Our results indicate that isoprene-emitting trees may have a competitive advantage over non-isoprene emitting ones as temperatures rise, indicating that biological diversity may be affected in some ecosystems because of heat tolerance mechanisms. - We report that elevated CO{sub 2} confers increased thermotolerance on both aspen and birch trees while isoprene production in aspen confers further thermotolerance in aspen.

  4. Differential response of aspen and birch trees to heat stress under elevated carbon dioxide

    International Nuclear Information System (INIS)

    Darbah, Joseph N.T.; Sharkey, Thomas D.; Calfapietra, Carlo; Karnosky, David F.

    2010-01-01

    The effect of high temperature on photosynthesis of isoprene-emitting (aspen) and non-isoprene-emitting (birch) trees were measured under elevated CO 2 and ambient conditions. Aspen trees tolerated heat better than birch trees and elevated CO 2 protected photosynthesis of both species against moderate heat stress. Elevated CO 2 increased carboxylation capacity, photosynthetic electron transport capacity, and triose phosphate use in both birch and aspen trees. High temperature (36-39 deg. C) decreased all of these parameters in birch regardless of CO 2 treatment, but only photosynthetic electron transport and triose phosphate use at ambient CO 2 were reduced in aspen. Among the two aspen clones tested, 271 showed higher thermotolerance than 42E possibly because of the higher isoprene-emission, especially under elevated CO 2 . Our results indicate that isoprene-emitting trees may have a competitive advantage over non-isoprene emitting ones as temperatures rise, indicating that biological diversity may be affected in some ecosystems because of heat tolerance mechanisms. - We report that elevated CO 2 confers increased thermotolerance on both aspen and birch trees while isoprene production in aspen confers further thermotolerance in aspen.

  5. Differential response of Aspen and Birch trees to heat stress under elevated carbon dioxide

    Science.gov (United States)

    Joseph N.T. Darbah; Thomas D. Sharkey; Carlo Calfapietra; David F. Karnosky

    2010-01-01

    The effect of high temperature on photosynthesis of isoprene-emitting (aspen) and non-isoprene-emitting (birch) trees were measured under elevated CO2 and ambient conditions. Aspen trees tolerated heat better than birch trees and elevated CO2 protected photosynthesis of both species against moderate heat stress. Elevated CO...

  6. Fertilization increases diameter growth of birch-beech-maple trees in New Hampshire

    Science.gov (United States)

    L. O. Safford

    1973-01-01

    In a 60-year-old northern hardwood stand treated with lime plus NPK fertilizer, the following increases in average basal area growth rate over untreated trees were observed: sugar maple 128 percent, paper birch 69 percent, yellow birch 51 percent, and beech 20 percent. Magnitude of response was inversely related to relative growth rate of the species. Growth rate...

  7. Are the birch trees in Southern England a source of Betula pollen for North London?

    Science.gov (United States)

    Skjøth, C. A.; Smith, M.; Brandt, J.; Emberlin, J.

    2009-01-01

    Birch pollen is highly allergenic. Knowledge of daily variations, atmospheric transport and source areas of birch pollen is important for exposure studies and for warnings to the public, especially for large cities such as London. Our results show that broad-leaved forests with high birch tree densities are located to the south and west of London. Bi-hourly Betula pollen concentrations for all the days included in the study, and for all available days with high birch pollen counts (daily average birch pollen counts >80 grains/m3), show that, on average, there is a peak between 1400 hours and 1600 hours. Back-trajectory analysis showed that, on days with high birch pollen counts ( n = 60), 80% of air masses arriving at the time of peak diurnal birch pollen count approached North London from the south in a 180 degree arc from due east to due west. Detailed investigations of three Betula pollen episodes, with distinctly different diurnal patterns compared to the mean daily cycle, were used to illustrate how night-time maxima (2200-0400 hours) in Betula pollen counts could be the result of transport from distant sources or long transport times caused by slow moving air masses. We conclude that the Betula pollen recorded in North London could originate from sources found to the west and south of the city and not just trees within London itself. Possible sources outside the city include Continental Europe and the Betula trees within the broad-leaved forests of Southern England.

  8. Shelf life extension and sensory evaluation of birch tree sap using chemical preservatives

    Directory of Open Access Journals (Sweden)

    Maciej Bilek

    2016-10-01

    Full Text Available The aim of this study was to assess the stability of the birch tree sap, depending on the addition and concentration of two chemical factors, ie. potassium sorbate and acids: malic, citric or lactic. As in our previous studies we found that the optimal physical parameter to assess the stability of birch sap is turbidity measurement, we used turbidimeter for estimate the effectiveness of shelf life extending. Sensory evaluation was carried out by university sensory panel with 8 skilled people (students and teachers with pre-selection and basic training of sensory methodology. On the other hand artificial perception measurements were realized by electronic nose. Birch tree sap stability without addition of preservatives, both room temperature and refrigerated, is less than three days. The effectiveness of preservation of birch tree sap depends on the concentration of acids. Independently of storage temperature, samples that received stability during the whole one-month storage period, were those with potassium sorbate and three acids in the highest concentrations, ie. malic acid at 0.3%, citric acid at 0.5% and lactic acid at 0.5%. Unfortunately, concentrations of acids, which allow extension of shelf life at least for one month in a room temperature, are characterized by the worst sensory evaluation rating. Thus, they should be corrected by the use of additives for improving the flavor, such as fruit syrups or herbal extracts. On the other hand, additionally storage in a refrigerated conditions allows one-month-stability for the sample with the highest sensory evaluation rating, ie. with the addition of lactic acid at 0.1% and potassium sorbate, which taste not need to be corrected.

  9. Proteomic analysis of the major birch allergen Bet v 1 predicts allergenicity for 15 birch species

    NARCIS (Netherlands)

    Schenk, M.F.; Cordewener, J.H.G.; America, A.H.P.; Peters, J.; Smulders, M.J.M.; Gilissen, L.J.W.J.

    2011-01-01

    Pollen of the European and Asian white birch (Betula pendula and B. platyphylla) causes hay fever in humans. The allergenic potency of other birch species is largely unknown. To identify birch trees with a reduced allergenicity, we assessed the immunochemical characteristics of 15 species and two

  10. Silvical characteristics of yellow birch (Betula alleghaniensis)

    Science.gov (United States)

    Adrian M. Gilbert

    1960-01-01

    Of the birches in the Northeast, the yellow birch is the elite species, by far the most valuable as a timber tree. More than that, it is one of the largest deciduous trees of northeastern America. It may reach 100 feet in height and more than 3 feet in diameter, and may live to 300 years of age. Pioneers told tales of the gigantic yellow birches they saw.

  11. Paper birch decline in the Niobrara River Valley, Nebraska: Weather, microclimate, and birch stand conditions

    Science.gov (United States)

    Stroh, Esther D.; Miller, Joel P.

    2009-01-01

    The Niobrara River Valley in north-central Nebraska supports scattered stands of paper birch (Betula papyrifera Marsh), a species more typical of boreal forests. These birch stands are considered to be relictual populations that have persisted since the end of the Wisconsin glaciation, when regional flora was more boreal in nature (Wright 1970, Kaul and others, 1988). Dieback of canopy-sized birch has been observed throughout the Niobrara Valley in recent years, although no onset dates are documented. The current dieback event probably started around or after the early 1980’s. The study objectives were to understand microclimatic conditions in birch stands relative to nearby weather stations and historic weather conditions, and to assess current health conditions of individual birch trees. Temperature was measured every half-hour from June 2005 through October 2007 in 12 birch stands and individual birch tree health was measured as expressed by percent living canopy in these and 13 additional stands in spring 2006 and 2007. Birch site microclimate was compared to data from a National Weather Service station in Valentine, Nebraska, and to an automated weather station at The Nature Conservancy Niobrara Valley Preserve 24 kilometers north of Johnstown, Nebraska. Historic weather data from the Valentine station and another National Weather Service Station at Ainsworth, Nebraska, were used to reconstruct minimum and maximum temperature at The Nature Conservancy and one microclimate monitoring station using Kalman filtering and smoothing algorithms. Birch stand microclimate differed from local weather stations as well as among stands. Birch health was associated with annual minimum temperature regimes; those stands whose annual daily minimum temperature regimes were most like The Nature Conservancy station contained smaller proportions of living trees. Frequency of freeze/thaw conditions capable of inducing rootlet injury and subsequent crown dieback significantly have

  12. Seasonal and inter-annual variation of Beryllium-7 deposition in birch-tree leaves and grass in the northeast upland area of the Czech Republic

    Energy Technology Data Exchange (ETDEWEB)

    Poeschl, Michael, E-mail: poschl@mendelu.c [Department of Molecular Biology and Radiobiology, Faculty of Agronomy, Mendel University of Agriculture in Brno, Zemedelska 1, 61300 Brno (Czech Republic); Brunclik, Tomas, E-mail: brunclik@georadis.co [Georadis s.r.o., Hudcova 56b, 621 00 Brno (Czech Republic); Hanak, Jaromir, E-mail: jaromir.hanak@geology.c [Czech Geological Survey, Department of Environmental Geology and Geophysics, Leitnerova 22, 658 69 Brno (Czech Republic)

    2010-09-15

    The activity concentrations of Beryllium-7 ({sup 7}Be), a naturally occurring radioisotope produced in the atmosphere, were measured in leaves of birch-trees, above-ground parts of grass, soil and rainwater in the mountain massive Kralicky Sneznik (the northeast of the Czech Republic, altitude about 750 m) in the years of 2005, 2006 and 2007. Dried and ground samples of the plants and soils, and water samples from wet deposition were used to determine the {sup 7}Be content using a semiconductor gamma spectrometer. The {sup 7}Be values ranged from 147.0 to 279.6 Bq kg{sup -1}, from 48.7 to 740.8 Bq kg{sup -1}, from 2.1 to 8.7 Bq kg{sup -1}, and from 0.6 to 1.9 Bq kg{sup -1} in birch-tree leaves, grass samples, soils, and rainwater, respectively. Insignificant inter-annual variations but significant increase in the {sup 7}Be activity concentrations during the spring and summer months were observed in birch-tree leaves and grass samples. The seasonal variation of the {sup 7}Be concentrations in grass samples correlated (R{sup 2} = 0.4663 and 0.6489) with precipitation. No similar correlation was found for {sup 7}Be in birch-tree leaves. Beryllium-7 content in birch-tree leaves and in aerial parts of grass was mainly caused by direct transport of {sup 7}Be from wet deposition into aerial parts of the observed plants.

  13. Survival and growth for pubescent birch, pendula birch and common alder growing on farmland areas; Oeverlevnad och tillvaext hos glasbjoerk, vaartbjoerk och klibbal planterade paa aakermark

    Energy Technology Data Exchange (ETDEWEB)

    Johansson, Tord

    2000-07-01

    Pendula birches (Betula pendula Roth) and pubescent birches (Betula pubescens Ehrh.) were planted on former farmland. Before planting, the ground was harrowed or the ground was sprayed with terbuthylazine. Tree shelters were used as protection against weeds, voles and wild habitat. Birches treated with terbuthylazine showed the lowest survival. Birches growing in tree shelters were tallest and those growing on spots treated with terbuthylazine were smallest. The diameter at 0.1 m did not differ in a statistically significant way between the treatments. In another experiment with different herbicides, common alder (Alnus glutinosa (L.) Gaertn.) and pendula birch (Betula pendula Roth) were planted on former farmland that had been treated with glyphosate, terbuthylazine and propyzamide or after ground had been harrowed or not treated. In the study on herbicide-treated plants, birch had the highest plant survival. Mostly, species treated with glyphosate were thicker than species treated in other ways. Both species appeared sensitive to terbuthylazine, but not to glyphosate. Birch was not sensitive for propyzamide in opposite to alder. Some practical recommendations concerning afforestation of former farmland, especially weeding, are given.

  14. On the Effect of Thinning on Tree Growth and Stand Structure of White Birch (Betula platyphylla Sukaczev and Siberian Larch (Larix sibirica Ledeb. in Mongolia

    Directory of Open Access Journals (Sweden)

    Alexander Gradel

    2017-03-01

    Full Text Available The forests of North Mongolia are largely dominated either by larch (Larix sibirica Ledeb. or birch (Betula platyphylla Sukaczev. The increasing demand for timber and firewood is currently met by removal of wood from these forest stands. Therefore, silvicultural approaches that account for both utilization and protection are needed. Thinning trials were established in the research area Altansumber, in the mountain forest steppe west of the town of Darkhan. We analyzed the response of non-spatial and spatial structure and growth of birch and larch stands on thinning. Before thinning, spatial tree distribution was largely clumped. Thinning promoted regular tree distribution. Ingrowth of new stems after thinning tended to redirect stand structure towards clumping. Both relative and absolute tree growth and competition were evaluated before, directly after, and three years after the thinning. Competition played a significant role in tree growth before thinning. A reduction in competition after thinning triggered significantly increased growth of both birch and larch. The observed positive growth response was valid in absolute and relative terms. A methodically based forest management strategy, including thinning operations and selective cuttings, could be established, even under the harsh Mongolian conditions. Our findings could initiate the development of broader forest management guidelines for the light-taiga dominated stands.

  15. Molecular passportization of clones of karelian birch using PCRwith semi-specific primers

    Directory of Open Access Journals (Sweden)

    Tatyana V Matveeva

    2008-09-01

    Full Text Available Using 4 clones of Karelian birch (Betula pendula Roth var caretica Merckl. from the collection of the karelian birch of the laboratory of genetics of Research Institute of Forest Genetics and Breeding, Voronezh, one normal tree of Betula pendula Roth, and one tree of B. pubescens Ehrh., collected from the nature, we have analyzed the possibility of application of PCR with semi-specific primers for molecular typing. We found primers with high percentage of polymorphic markers. These primers could be recommended for molecular typing of birch.

  16. Ecological and phytopathological status of birch stands on the territory of Krasnoyarsk group of districts

    Directory of Open Access Journals (Sweden)

    A. I. Tatarintsev

    2015-04-01

    Full Text Available According to inspection data, the health and vital status of birch (Betula pendula Roth. stands in Krasnoyarsk group of lands (southern part of Central Siberia were estimated (established as satisfactory in general; about half of birch stands near urbanized areas were weakened. The condition of stands decreased significantly with increased recreation use, the effect of technogenic pollution was negligible. The most valuable (important representatives of pathogenic biota identified on birch trees were infestations of necrotic cancer and rot diseases. In birch stands the bacterial dropsy was found to be widespread (agent of infection – Erwinia multivora Scz.-Parf, occurrence of the disease ranged from a single ill tree up to 10–38 % of the stands. The birch stands in taiga areas were affected to a greater extent than in forest-steppe; there were high yield class stands on moist soils. Prevalence of bacteriosis rose with increasing stand age and density and not dependent on recreation use level. Trees with dropsy are dead in fact or potentially. In taiga birch forests the infection and rot of roots was caused by honey agaric (Armillaria mellea sensu lato, that lead to single or, rarely, group tree drying and the fungus usually eliminated already weakened trees. Wood biomass was destroyed by complex of aphyllophorous Hymenomycetes, their hemiparasitic species caused stem rots that decreased stand marketability and also resulted in rot-realated wind-break accumulation. Occurrence of rot was significantly higher in second growth birch stands, possibly above 20 %; the relationship between rot prevalence and forest assessment was not revealed.

  17. Rhizosphere C flux from tree roots to soil: spatial and temporal differences between sugar maple and yellow birch saplings

    Science.gov (United States)

    Phillips, R. P.; Fahey, T. J.

    2003-12-01

    Rhizosphere carbon flux (RCF) has rarely been measured for intact root-soil systems. We measured RCF for eight year-old saplings of sugar maple (Acer saccharum) and yellow birch (Betula allegheniensis) collected from Hubbard Brook Experimental Forest and transplanted into 35 cm diameter pots with native soil horizons intact. We hypothesized birch roots which support ectomycorrhizal fungi would release more C to the rhizosphere than sugar maple roots which support vesicular-arbuscular mycorrhizal fungi. Saplings (n=5) were pulse-labeled with 13CO2 at ambient CO2 concentrations for 4-6 hours, and the label was chased through rhizosphere and bulk soil pools in organic and mineral horizons for 7 days. We observed immediate appearance of the label in rhizosphere soil, and there was a striking difference in the temporal pattern of 13C concentration between species. In maple, peak concentration of the label appeared at day 1 and declined over time whereas in birch the label increased in concentration over the 7 day chase period. As a result, total RCF was 2-3 times greater from birch roots. We estimate at least 5% and 10% of NPP may be released from this flux pathway in sugar maple and yellow birch saplings respectively. These results suggest that rhizosphere C flux likely represents a substantial proportion of NPP in northern hardwood forests, and may be influenced by trees species and mycorrhizal association.

  18. Expression of bgt gene in transgenic birch (Betula platyphylla Suk.)

    African Journals Online (AJOL)

    STORAGESEVER

    2009-08-04

    Aug 4, 2009 ... Study on the characteristics of integration and expression is the basis of genetic stability of foreign genes in transgenic trees. To obtain insight into the relationship of transgene copy number and expression level, we screened 22 transgenic birch lines. Southern blot analysis of the transgenic birch.

  19. Expression of bgt gene in transgenic birch (Betula platyphylla Suk ...

    African Journals Online (AJOL)

    Study on the characteristics of integration and expression is the basis of genetic stability of foreign genes in transgenic trees. To obtain insight into the relationship of transgene copy number and expression level, we screened 22 transgenic birch lines. Southern blot analysis of the transgenic birch plants indicated that the ...

  20. Budburst phenology of white birch in industrially polluted areas

    International Nuclear Information System (INIS)

    Kozlov, Mikhail V.; Eraenen, Janne K.; Zverev, Vitali E.

    2007-01-01

    Effects of environmental contamination on plant seasonal development have only rarely been properly documented. Monitoring of leaf growth in mountain birch, Betula pubescens subsp. czerepanovii, around a nickel-copper smelter at Monchegorsk hinted advanced budburst phenology in most polluted sites. However, under laboratory conditions budburst of birch twigs cut in late winter from trees naturally growing around three point polluters (nickel-copper smelter at Monchegorsk, aluminium factory at Kandalaksha, and iron pellet plant at Kostomuksha) showed no relationship with distance from the emission source. In a greenhouse experiment, budburst phenology of mountain birch seedlings grown in unpolluted soil did not depend on seedling origin (from heavily polluted vs. clean sites), whereas seedlings in metal-contaminated soil demonstrated delayed budburst. These results allow to attribute advanced budburst phenology of white birch in severely polluted sites to modified microclimate, rather than to pollution impact on plant physiology or genetics. - Advanced budburst phenology in white birch in severely polluted sites is explained by modified microclimate, not by pollution impact on plant physiology

  1. Temple tree; Frangipani-common name; Gopur- champa - Sanskrit

    Indian Academy of Sciences (India)

    Plumeria rubraL. Syn. P. acutifoliaPoir. (Temple tree; Frangipani-common name; Gopur- champa - Sanskrit, Hindi) of Apocynaceae is an ornamental tree that is often cultivated in gardens and near temples. Both leaves and flowers are showy and contain milky latex. Flowers are in bunches, large and white with yellow ...

  2. Reproduction of mountain birch along a strong pollution gradient near Monchegorsk, Northwestern Russia

    International Nuclear Information System (INIS)

    Kozlov, Mikhail V.; Zvereva, Elena L.

    2004-01-01

    We explored effects of severe pollution on sexual reproduction of mountain birch, Betula pubescens subsp. czerepanovii, by counting catkins on sample branches and weighing both somatic and generative structures of both short and long shoots from birches growing at 21 sites around large nickel-copper smelter at Monchegorsk, Northwestern Russia. Proportion of reproducing trees, production of catkins, shoot and catkin weight, as well as the relative difference in weight of somatic structures of generative and vegetative shoots, were generally independent of pollution load; in 2003 birches growing in industrial barrens produced more catkins than birches growing in unpolluted forests. Thus, we found no support for the hypothesis that reproductive allocation should decrease with decrease in environmental capacity. Absence of adverse effects might indicate that long-lasting pollution impact already eliminated the most sensitive individuals from the affected birch populations. - Capsule: Variation in reproductive characteristics of mountain birch near the nickel-copper smelter at Monchegorsk is independent of pollution load

  3. Potential role of soil calcium in recovery of paper birch following ice storm injury in Vermont, USA

    Science.gov (United States)

    Joshua M. Halman; Paul G. Schaberg; Gary J. Hawley; Christopher F. Hansen

    2011-01-01

    In recent years, an increased number of mature paper birch (Betula papyrifera Marsh.) and heart-leafed paper birch (B. papyrifera var. cordifolia (Regel) Fern.) in northeastern United States forests have exhibited decline symptoms including foliar loss, reduced fine branching, and tree mortality. We assessed crown health, radial...

  4. Efficacy of recombinant birch pollen vaccine for the treatment of birch-allergic rhinoconjunctivitis

    DEFF Research Database (Denmark)

    Pauli, Gabrielle; Larsen, Tina H; Rak, Sabina

    2008-01-01

    BACKGROUND: Recombinant DNA technology has the potential to produce allergen-specific immunotherapy vaccines with defined composition. OBJECTIVE: To evaluate the effectiveness of a new recombinant birch pollen allergen vaccine in patients with birch pollen allergy. METHODS: A multicenter, randomi......-treated group. CONCLUSION: The rBet v 1-based vaccine was safe and effective in treating birch pollen allergy, and induced a highly specific immune response.......BACKGROUND: Recombinant DNA technology has the potential to produce allergen-specific immunotherapy vaccines with defined composition. OBJECTIVE: To evaluate the effectiveness of a new recombinant birch pollen allergen vaccine in patients with birch pollen allergy. METHODS: A multicenter......, randomized, double-blind, placebo-controlled trial was undertaken to compare the following 3 vaccines in 134 adults with birch pollen allergy: recombinant birch pollen allergen vaccine (rBet v 1a), licensed birch pollen extract, natural purified birch pollen allergen (nBet v 1), and placebo. Patients...

  5. Elastic and Strength Properties of Heat-Treated Beech and Birch Wood

    Directory of Open Access Journals (Sweden)

    Vlastimil Borůvka

    2018-04-01

    Full Text Available This paper deals with the impact of heat treatment on the elastic and strength properties of two diffuse porous hardwoods, namely Fagus sylvatica and Betula pendula. Two degrees of the heat treatment were used at temperatures of 165 °C and 210 °C. The dynamic and static elasticity modulus, bending strength, impact toughness, hardness, and density were tested. It is already known that an increase in treatment temperature decreases the mechanical properties and, on the other hand, leads to a better shape and dimensional stability. Higher temperatures of the heat treatment correlated with lower elastic and strength properties. In the case of higher temperature treatments, the decline of tested properties was noticeable as a result of serious changes in the chemical composition of wood. It was confirmed that at higher temperature stages of treatment, there was a more pronounced decrease in beech properties compared to those of the birch, which was the most evident in their bending strength and hardness. Our research confirmed that there is no reason to consider birch wood to be of a lesser quality, although it is regarded by foresters as an inferior tree species. After the heat treatment, the wood properties are almost the same as in the case of beech wood.

  6. BioNames: linking taxonomy, texts, and trees

    Directory of Open Access Journals (Sweden)

    Roderic D.M. Page

    2013-10-01

    Full Text Available BioNames is a web database of taxonomic names for animals, linked to the primary literature and, wherever possible, to phylogenetic trees. It aims to provide a taxonomic “dashboard” where at a glance we can see a summary of the taxonomic and phylogenetic information we have for a given taxon and hence provide a quick answer to the basic question “what is this taxon?” BioNames combines classifications from the Global Biodiversity Information Facility (GBIF and GenBank, images from the Encyclopedia of Life (EOL, animal names from the Index of Organism Names (ION, and bibliographic data from multiple sources including the Biodiversity Heritage Library (BHL and CrossRef. The user interface includes display of full text articles, interactive timelines of taxonomic publications, and zoomable phylogenies. It is available at http://bionames.org.

  7. Assessing the Potential Stem Growth and Quality of Yellow Birch Prior to Restoration: A Case Study in Eastern Canada

    Directory of Open Access Journals (Sweden)

    Alexis Achim

    2013-09-01

    Full Text Available Past silvicultural treatments have resulted in the high-grading mixed temperate forests of Québec, Canada. Despite recognition of this issue, the low occurrence of yellow birch (Betula alleghaniensis Britton within current stands raises questions about the potential of the species to grow and eventually constitute a high-quality forest resource. The objective of this study was to assess this potential using tree characteristics, forest structure and additional site and climatic conditions as predictors. A total of 145 trees were sampled in two areas located in the same bioclimatic zone. Lower-Saguenay-Charlevoix was chosen as an area where a restoration plan could be implemented, whereas Portneuf was selected as a reference. We used nonlinear mixed models to investigate which environmental factors are likely to influence the radial growth and stem quality of yellow birch sample trees. Our results suggest that topographic and climatic conditions, as well as the competitive environment of the trees, are important factors to consider in the evaluation of yellow birch production. Despite the limited occurrence of yellow birch, the potential for growth and quality was high in the Lower-Saguenay-Charlevoix area. For equivalent topographic, climatic, and competitive environment conditions, there was no significant difference in either radial growth or stem quality with Portneuf. We suggest that the economic interest of producing high quality timber should be used to justify the implementation of a restoration strategy in the Lower-Saguenay-Charlevoix area.

  8. DNA typing of birch: Development of a forensic STR system for Betula pendula and Betula pubescens.

    Science.gov (United States)

    Wesselink, Monique; Dragutinović, Aleksandar; Noordhoek, Jeroen W; Bergwerff, Leonie; Kuiper, Irene

    2018-04-07

    Although botanical trace evidence is often encountered in case investigations, the utilization of such traces in forensic investigations is still limited. Development of a forensic STR system for the two species of Betula (birch) indigenous to and abundant in North West Europe is a step in enhancing the applicability of traces from these species. We describe six microsatellite markers developed for birch species in detail, including repeat structure, and we propose a nomenclature for the encountered alleles. To assess the population characteristics, the genetic composition of wild, planted and intermediate populations of Betula pendula (a diploid species) and Betula pubescens (a tetraploid species) were investigated. The genetic differences between these two species were larger than the differences between populations of one species, even when both species co-occurred at one location. Therefore allele frequencies were estimated for both species separately. General, conservative random match probabilities were estimated for wild trees based on these allele frequencies (5∙10 -6 for the diploid B. pendula and 1∙10 -13 for the tetraploid B. pubescens), illustrating the potential relevance if trace evidence secured from a suspect is found to match a birch tree growing on or near a crime scene. Apart from wild trees, planted Betula trees also occur that may not originate from seeds, but may have been propagated through cloning. Based on the studied Betula trees, the random match probability of a potentially planted profile might be as high as 1.4∙10 -2 . Copyright © 2018 Elsevier B.V. All rights reserved.

  9. The impact of birch seedlings on evapotranspiration from a mined peatland: an experimental study in southern Quebec, Canada

    Directory of Open Access Journals (Sweden)

    E. Fay

    2009-03-01

    Full Text Available Dense stands of birch (Betula spp. on abandoned peat workings have often been identified as potential barriers to site restoration, but little research has been conducted to evaluate their impact on water resources. The objective of this experimental study was to determine whether birch seedlings established on an abandoned mined peatland in eastern Canada had a significant impact on evapotranspiration. Transpiration rates from birch seedlings planted in containers filled with Sphagnum compost were measured gravimetrically. Unplanted containers were used to similarly measure evaporation rates from bare peat. On average, the measured rates of evaporation (per unit area from peat were 2.5 times the rates of transpiration from birch leaves. However, if the total leaf area of a dense birch population established on an abandoned mined peatland is considered, the total amount of water lost through birch transpiration could be higher than that lost by evaporation from the peat surface. This study provides a rough estimate of potential water losses due to birch seedling transpiration, and indicates that a dense population of birch on a mined peatland may influence site hydrology even at the early establishment phase (seedlings. Consequently, recently abandoned mined peatlands should be restored rapidly to prevent the establishment of birch trees.

  10. Interspecific variation in resistance of Asian, European, and North American birches (Betula spp.) to bronze birch borer (Coleoptera: Buprestidae).

    Science.gov (United States)

    Nielsen, David G; Muilenburg, Vanessa L; Herms, Daniel A

    2011-06-01

    Bronze birch borer (Agrilus anxius Gory) is the key pest of birches (Betula spp.) in North America, several of which have been recommended for ornamental landscapes based on anecdotal reports of borer resistance that had not been confirmed experimentally. In a 20-yr common garden experiment initiated in 1979 in Ohio, North American birch species, including paper birch (Betula papyrifera Marshall), 'Whitespire' gray birch (Betula populifolia Marshall), and river birch (Betula nigra L.), were much more resistant to bronze birch borer than species indigenous to Europe and Asia, including European white birch (Betula pendula Roth), downy birch (Betula pubescens Ehrh.), monarch birch (Betula maximowicziana Regel), and Szechuan white birch (Betula szechuanica Jansson). Within 8 yr of planting, every European white, downy, and Szechuan birch had been colonized and killed, although 100% of monarch birch had been colonized and 88% of these plants were killed after nine years. Conversely, 97% of river birch, 76% of paper birch, and 73% Whitespire gray birch were alive 20 yr after planting, and river birch showed no evidence of colonization. This pattern is consistent with biogeographic theory of plant defense: North American birch species that share a coevolutionary history with bronze birch borer were much more resistant than naïve hosts endemic to Europe and Asia, possibly by virtue of evolution of targeted defenses. This information suggests that if bronze birch borer were introduced to Europe or Asia, it could threaten its hosts there on a continental scale. This study also exposed limitations of anecdotal observation as evidence of host plant resistance.

  11. Tree and shrub expansion over the past 34 years at the tree-line near Abisko, Sweden.

    Science.gov (United States)

    Rundqvist, Sara; Hedenås, Henrik; Sandström, Anneli; Emanuelsson, Urban; Eriksson, Håkan; Jonasson, Christer; Callaghan, Terry V

    2011-09-01

    Shrubs and trees are expected to expand in the sub-Arctic due to global warming. Our study was conducted in Abisko, sub-arctic Sweden. We recorded the change in coverage of shrub and tree species over a 32- to 34-year period, in three 50 x 50 m plots; in the alpine-tree-line ecotone. The cover of shrubs and trees (tree stems (> or =3.5 cm) were noted and positions determined. There has been a substantial increase of cover of shrubs and trees, particularly dwarf birch (Betula nana), and mountain birch (Betula pubescens ssp. czerepanovii), and an establishment of aspen (Populus tremula). The other species willows (Salix spp.), juniper (Juniperus communis), and rowan (Sorbus aucuparia) revealed inconsistent changes among the plots. Although this study was unable to identify the causes for the change in shrubs and small trees, they are consistent with anticipated changes due to climate change and reduced herbivory.

  12. Plants and geographical names in Croatia.

    Science.gov (United States)

    Cargonja, Hrvoje; Daković, Branko; Alegro, Antun

    2008-09-01

    The main purpose of this paper is to present some general observations, regularities and insights into a complex relationship between plants and people through symbolic systems like geographical names on the territory of Croatia. The basic sources of data for this research were maps from atlas of Croatia of the scale 1:100000. Five groups of maps or areas were selected in order to represent main Croatian phytogeographic regions. A selection of toponyms from each of the map was made in which the name for a plant in Croatian language was recognized (phytotoponyms). Results showed that of all plant names recognized in geographical names the most represented are trees, and among them birch and oak the most. Furthermore, an attempt was made to explain the presence of the most represented plant species in the phytotoponyms in the light of general phytogeographical and sociocultural differences and similarities of comparing areas. The findings confirm an expectation that the genera of climazonal vegetation of particular area are the most represented among the phytotoponyms. Nevertheless, there are ample examples where representation of a plant name in the names of human environment can only be ascribed to ethno-linguistic and socio-cultural motives. Despite the reductionist character of applied methodology, this research also points out some advantages of this approach for ethnobotanic and ethnolinguistic studies of greater areas of human environment.

  13. Birch's Mantle

    Science.gov (United States)

    Anderson, D. L.

    2002-12-01

    Francis Birch's 1952 paper started the sciences of mineral physics and physics of the Earth's interior. Birch stressed the importance of pressure, compressive strain and volume in mantle physics. Although this may seem to be an obvious lesson many modern paradoxes in the internal constitution of the Earth and mantle dynamics can be traced to a lack of appreciation for the role of compression. The effect of pressure on thermal properties such as expansivity can gravitational stratify the Earth irreversibly during accretion and can keep it chemically stratified. The widespread use of the Boussinesq approximation in mantle geodynamics is the antithesis of Birchian physics. Birch pointed out that eclogite was likely to be an important component of the upper mantle. Plate tectonic recycling and the bouyancy of oceanic crust at midmantle depths gives credence to this suggestion. Although peridotite dominates the upper mantle, variations in eclogite-content may be responsible for melting- or fertility-spots. Birch called attention to the Repetti Discontinuity near 900 km depth as an important geodynamic boundary. This may be the chemical interface between the upper and lower mantles. Recent work in geodynamics and seismology has confirmed the importance of this region of the mantle as a possible barrier. Birch regarded the transition region (TR ; 400 to 1000 km ) as the key to many problems in Earth sciences. The TR contains two major discontinuities ( near 410 and 650 km ) and their depths are a good mantle thermometer which is now being exploited to suggest that much of plate tectonics is confined to the upper mantle ( in Birch's terminology, the mantle above 1000 km depth ). The lower mantle is homogeneous and different from the upper mantle. Density and seismic velocity are very insensitive to temperature there, consistent with tomography. A final key to the operation of the mantle is Birch's suggestion that radioactivities were stripped out of the deeper parts of

  14. Mountain birch – potentially large source of sesquiterpenes into high latitude atmosphere

    Directory of Open Access Journals (Sweden)

    A. Arneth

    2009-11-01

    Full Text Available Emissions of volatile organic compounds (VOCs from mountain birches were measured in Abisko, northern Sweden. Mountain birches make up the majority of the tree biomass in Scandinavian high latitudes, a region subject to significant climate warming. The measurements were carried out in two growing seasons. The emissions of four branches, each from a different individual tree, were measured in June–August 2006 and one of them again in July 2007. The measurements were conducted using a dynamic flow through chamber covered with Teflon film. The studied mountain birches were found to emit substantial amounts of linalool, monoterpenes and sesquiterpenes. The monoterpene emission was dominated by sabinene. The magnitude and composition of the sesquiterpene emission changed dramatically between the years. For example, the average α-farnesene emission potential in 2006 was almost 2600 ng gdw−1 h−1 (3.5 pmol gdw−1 s−1 while in 2007 α-farnesene was not detected at all. Also the emissions of other sesquiterpenes decreased in 2007 to a fraction of that in 2006. One possible explanation for the change in emissions is the herbivory damage that occurred in the area in 2004. Herbivory is known to enhance the emissions of sesquiterpenes, especially those of α-farnesene, and the effect may last for several years.

  15. Assessment of suitability of tree species for the production of biomass on trace element contaminated soils

    International Nuclear Information System (INIS)

    Evangelou, Michael W.H.; Deram, Annabelle; Gogos, Alexander; Studer, Björn; Schulin, Rainer

    2012-01-01

    Highlights: ► Birch: lowest metal concentrations in foliage, wood and bark. ► Bark proportion does not have to decline with increasing age of tree. ► Long harvest rotation (>25 y) reduces metal concentrations in stem. ► Birch: most suitable tree for BCL. - Abstract: To alleviate the demand on fertile agricultural land for production of bioenergy, we investigated the possibility of producing biomass for bioenergy on trace element (TE) contaminated land. Soil samples and plant tissues (leaves, wood and bark) of adult willow (Salix sp.), poplar (Populus sp.), and birch (Betula pendula) trees were collected from five contaminated sites in France and Germany and analysed for Zn, Cd, Pb, Cu, Ca, and K. Cadmium concentration in tree leaves were correlated with tree species, whereas Zn concentration in leaves was site correlated. Birch revealed significantly lower leaf Cd concentrations (1.2–8.9 mg kg −1 ) than willow and poplar (5–80 mg kg −1 ), thus posing the lowest risk for TE contamination of surrounding areas. Birch displayed the lowest bark concentrations for Ca (2300–6200 mg kg −1 ) and K (320–1250 mg kg −1 ), indicating that it would be the most suitable tree species for fuel production, as high concentrations of K and Ca decrease the ash melting point which results in a reduced plant lifetime. Due to higher TE concentrations in bark compared to wood a small bark proportion in relation to the trunk is desirable. In general the bark proportion was reduced with the tree age. In summary, birch was amongst the investigated species the most suitable for biomass production on TE contaminated land.

  16. Impacts of Elevated Atmospheric CO2 and O3 on Paper Birch (Betula papyrifera: Reproductive Fitness

    Directory of Open Access Journals (Sweden)

    Joseph N. T. Darbah

    2007-01-01

    Full Text Available Atmospheric CO2 and tropospheric O3 are rising in many regions of the world. Little is known about how these two commonly co-occurring gases will affect reproductive fitness of important forest tree species. Here, we report on the long-term effects of CO3 and O3 for paper birch seedlings exposed for nearly their entire life history at the Aspen FACE (Free Air Carbon Dioxide Enrichment site in Rhinelander, WI. Elevated CO2 increased both male and female flower production, while elevated O3 increased female flower production compared to trees in control rings. Interestingly, very little flowering has yet occurred in combined treatment. Elevated CO2 had significant positive effect on birch catkin size, weight, and germination success rate (elevated CO2 increased germination rate of birch by 110% compared to ambient CO2 concentrations, decreased seedling mortality by 73%, increased seed weight by 17%, increased root length by 59%, and root-to-shoot ratio was significantly decreased, all at 3 weeks after germination, while the opposite was true of elevated O3 (elevated O3 decreased the germination rate of birch by 62%, decreased seed weight by 25%, and increased root length by 15%. Under elevated CO2, plant dry mass increased by 9 and 78% at the end of 3 and 14 weeks, respectively. Also, the root and shoot lengths, as well as the biomass of the seedlings, were increased for seeds produced under elevated CO2, while the reverse was true for seedlings from seeds produced under the elevated O3. Similar trends in treatment differences were observed in seed characteristics, germination, and seedling development for seeds collected in both 2004 and 2005. Our results suggest that elevated CO2 and O3 can dramatically affect flowering, seed production, and seed quality of paper birch, affecting reproductive fitness of this species.

  17. Uses of tree saps in northern and eastern parts of Europe

    Directory of Open Access Journals (Sweden)

    Ingvar Svanberg

    2012-12-01

    Full Text Available In this article we review the use of tree saps in northern and eastern Europe. Published accounts by travellers, ethnologists and ethnobotanists were searched for historical and contemporary details. Field observations made by the authors have also been used. The presented data shows that the use of tree sap has occurred in most north and eastern European countries. It can be assumed that tree saps were most used where there were extensive stands of birch or maple trees, as these two genera generally produce the largest amount of sap. The taxa most commonly used have been Betula pendula, B. pubescens, and Acer platanoides, but scattered data on the use of several other taxa are presented. Tree sap was used as a fresh drink, but also as an ingredient in food and beverages. It was also fermented to make light alcoholic products like ale and wine. Other folk uses of tree saps vary from supplementary nutrition in the form of sugar, minerals and vitamins, to cosmetic applications for skin and hair and folk medicinal use. Russia, Ukraine, Belarus, Estonia, Latvia and Lithuania are the only countries where the gathering and use of sap (mainly birch sap has remained an important activity until recently, due to the existence of large birch forests, low population density and the incorporation of sap into the former Soviet economic system. It is evident that gathering sap from birch and other trees was more widespread in earlier times. There are records indicating extensive use of tree saps from Scandinavia, Poland, Slovakia and Romania, but it is primarily of a historical character. The extraction of tree sap in these countries is nowadays viewed as a curiosity carried out only by a few individuals. However, tree saps have been regaining popularity in urban settings through niche trading.

  18. Deciduous birch canopy as unexpected contributor to stand level atmospheric reactivity in boreal forests

    Science.gov (United States)

    Bäck, Jaana; Taipale, Ditte; Aalto, Juho

    2017-04-01

    In boreal forests, deciduous trees such as birches may in future climate become more abundant due to their large biomass production capacity, relatively good resource use ability and large acclimation potential to elevated CO2 levels and warmer climate. Increase in birch abundance may lead to unpredicted consequences in atmospheric composition. Currently it is acknowledged that conifers such as Scots pine and Norway spruce are important sources for volatile organic compounds (VOCs), especially monoterpenes, throughout the year, although the strong temperature relationships implies that emissions are highest in summertime. However, the dynamics of the deciduous birch foliage VOC emissions and their relationship with environmental drivers during the development, maturation and senescence of foliage has not been well analyzed. Long-term measurements of birch, which are unfortunately very sparse, can provide very useful information for the development of biosphere-atmosphere models that simulate boreal and subarctic forested areas where birch is often a sub-canopy species, occurs as a mixture among conifers or forms even pure stands in the higher latitudes. We measured the branch level VOC emissions from a mature Silver birch with proton transfer reaction mass spectrometer during 2014 and 2015 at the SMEAR II station (Station for Measuring Ecosystem-Atmosphere Relations), southern Finland. Our results showed that the Silver birch foliage is a huge source for both short-chained volatiles such as methanol, acetaldehyde and acetone, as well as for monoterpenes. The mean emission rates from birch leaves were 5 to 10 times higher than the corresponding emissions from Scots pine shoots. We compared several semi-empirical model approaches for determining the birch foliage monoterpene standardized emission potentials, and utilized the continuous emission measurements from the two growing seasons for development of a novel algorithm which accounts for the leaf development and

  19. Inter- and intra-specific responses to elevated ozone and chamber climate in northern birches

    International Nuclear Information System (INIS)

    Manninen, S.; Huttunen, S.; Vanhatalo, M.; Pakonen, T.; Haemaelaeinen, A.

    2009-01-01

    We studied the responses of micropropagated, northern provenances of downy, mountain and silver birches to elevated ozone (O 3 ) and changing climate using open-top chambers (OTCs). Contrary to our hypothesis, northern birches were sensitive to O 3 , i.e. O 3 levels of 31-36 ppb reduced the leaf and root biomasses by -10%, whereas wood biomass was affected to a lesser extent. The warmer and drier OTC climate enhanced growth in general, though there were differences among the species and clones, e.g. in bud burst and biomass production. Inter- and intra-specific responses to O 3 and changing climate relate to traits such as allocation patterns between the above- and belowground parts (i.e. root/shoot ratio), which further relate to nutrient and water economy. Our experiments may have mimicked future conditions quite well, but only long-term field studies can yield the information needed to forecast responses at both tree and ecosystem levels. - Northern birches are responsive to ambient ozone levels.

  20. Study of the betulin enriched birch bark extracts effects on human carcinoma cells and ear inflammation

    Directory of Open Access Journals (Sweden)

    Dehelean Cristina A

    2012-11-01

    Full Text Available Abstract Background Pentacyclic triterpenes, mainly betulin and betulinic acid, are valuable anticancer agents found in the bark of birch tree. This study evaluates birch bark extracts for the active principles composition. Results New improved extraction methods were applied on the bark of Betula pendula in order to reach the maximum content in active principles. Extracts were analyzed by HPLC-MS, Raman, SERS and 13C NMR spectroscopy which revealed a very high yield of betulin (over 90%. Growth inhibiting effects were measured in vitro on four malignant human cell lines: A431 (skin epidermoid carcinoma, A2780 (ovarian carcinoma, HeLa (cervix adenocarcinoma and MCF7 (breast adenocarcinoma, by means of MTT assay. All of the prepared bark extracts exerted a pronounced antiproliferative effect against human cancer cell lines. In vivo studies involved the anti-inflammatory effect of birch extracts on TPA-induced model of inflammation in mice. Conclusions The research revealed the efficacy of the extraction procedures as well as the antiproliferative and anti-inflammatory effects of birch extracts.

  1. Effects of decadal exposure to interacting elevated CO2 and/or O3 on paper birch (Betula papyrifera) reproduction

    International Nuclear Information System (INIS)

    Darbah, Joseph N.T.; Kubiske, Mark E.; Nelson, Neil; Oksanen, Elina; Vapaavuori, Elina; Karnosky, David F.

    2008-01-01

    We studied the effects of long-term exposure (nine years) of birch (Betula papyrifera) trees to elevated CO 2 and/or O 3 on reproduction and seedling development at the Aspen FACE (Free-Air Carbon Dioxide Enrichment) site in Rhinelander, WI. We found that elevated CO 2 increased both the number of trees that flowered and the quantity of flowers (260% increase in male flower production), increased seed weight, germination rate, and seedling vigor. Elevated O 3 also increased flowering but decreased seed weight and germination rate. In the combination treatment (elevated CO 2 + O 3 ) seed weight is decreased (20% reduction) while germination rate was unaffected. The evidence from this study indicates that elevated CO 2 may have a largely positive impact on forest tree reproduction and regeneration while elevated O 3 will likely have a negative impact. - In this study, we found that elevated CO 2 enhances and elevated O 3 decreases birch reproduction and early seedling growth

  2. Asymptomatic skin sensitization to birch predicts later development of birch pollen allergy in adults

    DEFF Research Database (Denmark)

    Bødtger, Uffe; Poulsen, Lars K; Malling, Hans-Jørgen

    2003-01-01

    = 6) were followed through use of daily diary cards during 3 consecutive birch pollen seasons. At inclusion and at the 3-year follow-up visit, conjunctival and nasal challenges, intradermal late-phase reaction evaluation, and measurement of specific IgE were performed. RESULTS: Asymptomatic sensitized...... a clinical characterization of skin test-positive subjects without symptoms and to ascertain the predictive values of common allergologic tests. METHODS: Asymptomatic adults with positive skin prick test results for birch (n = 15), nonatopic control subjects (n = 25), and birch pollen-allergic patients (n...

  3. Animal damage to birch

    Science.gov (United States)

    James S. Jordan; Francis M. Rushmore

    1969-01-01

    A relatively few animal species are responsible for most of the reported damage to the birches. White-tailed deer, yellow-bellied sapsuckers, porcupines, moose, and hares are the major animals involved. We will review reports of damage, discuss the underlying causes, and describe possible methods of control. For example, heavy deer browsing that eliminates birch...

  4. Tree Height-Diameter Relationships in the Alpine Treeline Ecotone Compared with Those in Closed Forests on Changbai Mountain, Northeastern China

    Directory of Open Access Journals (Sweden)

    Xiaoyu Wang

    2017-04-01

    Full Text Available Height-diameter relationship is one of the most important stature characteristics of trees. It will change with climatic conditions because height and diameter growth displays different sensitivities to climatic factors such as temperature. Detecting and understanding changes in the stature of trees growing along altitudinal gradients up to their upper limits can help us to better understand the adaptation strategy of trees under global warming conditions. On Changbai Mountain in northeastern China, height-diameter datasets were collected for 2723 Erman’s birch (Betula ermanii Cham. in the alpine treeline ecotone in 2006 and 2013, and for 888 Erman’s birch, spruce (Picea jezoensis Siebold & Zucc. Carr., larch (Larix olgensis A. Henry, and fir (Abies nephrolepis Trautv. ex Maxim. along an altitudinal gradient below the alpine treeline in 2006. These datasets were utilized to explore both changes in the stature of birch at the alpine treeline over time and variations in tree stature of different tree species across altitudes at a given time point (2006. Results showed that birch saplings (<140 cm in height became stunted while birches with a height of >140 cm became more tapered in the alpine treeline ecotone. The stature of birch along the altitudinal gradient became more tapered from 1700 to 1900 m above see level (a.s.l. and then became more stunted from 1900 to 2050 m a.s.l., with 1900 m a.s.l. being the altitudinal inflection point in this pattern. The treeline birch, due to its great temperature magnitude of distribution, displayed higher stature-plasticity in terms of its height-diameter ratio than the lower elevation species studied. The stature of birch is strongly modulated by altitude-related temperature but also co-influenced by other environmental factors such as soil depth and available water, wind speed, and duration and depth of winter snow cover. The high stature-plasticity of birch makes it fare better than other species to

  5. Photographic guide of selected external defect indicators and associated internal defects in yellow birch

    Science.gov (United States)

    Everette D. Rast; John A. Beaton; David L. Sonderman

    1991-01-01

    To properly classify or grade logs or trees, one must be able to correctly identify defect indicators and assess the effect of the underlying defect on possible end products. This guide assists the individual in identifying the surface defect indicator and shows the progressive stages of the defect throughout its development for yellow birch. Eleven types of external...

  6. Reported symptoms to peanut between 4 and 8 years among children sensitized to peanut and birch pollen - results from the BAMSE birth cohort.

    Science.gov (United States)

    Asarnoj, A; Ostblom, E; Ahlstedt, S; Hedlin, G; Lilja, G; van Hage, M; Wickman, M

    2010-02-01

    Specific IgE tests are sometimes difficult to interpret due to structural similarities between certain food and pollen allergens. This may be the reason why concomitant sensitization to peanut and birch pollen is frequently seen. The aim of this study was to investigate reported symptoms to peanut- and birch pollen in relation to sensitization. The data originate from 1928 children in the BAMSE birth cohort. Background factors and clinical parameters were obtained and the levels of IgE antibodies to peanut and birch pollen measured at 4 and 8 years. IgE antibodies to peanut were found in 5.5% and 7.4% of the children at 4 and 8 years, respectively. The IgE antibody levels to peanut were higher in children sensitized to peanut but not birch than in children sensitized to peanut and birch among both 4- and 8-year-olds (P = 0.093 and P = 0.003, respectively). Eight-year-olds sensitized to peanut but not birch, more often reported symptoms to peanut than children sensitized to both peanut and birch pollen (76%vs 46%, P = 0.002). The probability of reported symptoms to peanut increased significantly with increasing IgE levels to peanut, especially in 8-year-olds not sensitized to birch. Children sensitized to both peanut and birch pollen are less likely to report symptoms to peanut than children sensitized to peanut but not to birch pollen at 8 years. This is likely due to cross reactions between birch pollen and peanut and can explain the high sensitization rate to peanut in areas where birch trees are common.

  7. Comprehensive Transcriptome Analysis of Response to Nickel Stress in White Birch (Betula papyrifera.

    Directory of Open Access Journals (Sweden)

    Gabriel Theriault

    Full Text Available White birch (Betula papyrifera is a dominant tree species of the Boreal Forest. Recent studies have shown that it is fairly resistant to heavy metal contamination, specifically to nickel. Knowledge of regulation of genes associated with metal resistance in higher plants is very sketchy. Availability and annotation of the dwarf birch (B. nana enables the use of high throughout sequencing approaches to understanding responses to environmental challenges in other Betula species such as B. papyrifera. The main objectives of this study are to 1 develop and characterize the B. papyrifera transcriptome, 2 assess gene expression dynamics of B. papyrifera in response to nickel stress, and 3 describe gene function based on ontology. Nickel resistant and susceptible genotypes were selected and used for transcriptome analysis. A total of 208,058 trinity genes were identified and were assembled to 275,545 total trinity transcripts. The transcripts were mapped to protein sequences and based on best match; we annotated the B. papyrifera genes and assigned gene ontology. In total, 215,700 transcripts were annotated and were compared to the published B. nana genome. Overall, a genomic match for 61% transcripts with the reference genome was found. Expression profiles were generated and 62,587 genes were found to be significantly differentially expressed among the nickel resistant, susceptible, and untreated libraries. The main nickel resistance mechanism in B. papyrifera is a downregulation of genes associated with translation (in ribosome, binding, and transporter activities. Five candidate genes associated to nickel resistance were identified. They include Glutathione S-transferase, thioredoxin family protein, putative transmembrane protein and two Nramp transporters. These genes could be useful for genetic engineering of birch trees.

  8. BIRCH: A user-oriented, locally-customizable, bioinformatics system

    Science.gov (United States)

    Fristensky, Brian

    2007-01-01

    Background Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be challenging, pipelining data from one program to the next is particularly awkward, especially when using web-based programs. At the same time, system administrators tasked with maintaining these tools do not always appreciate the needs of research biologists. Results BIRCH (Biological Research Computing Hierarchy) is an organizational framework for delivering bioinformatics resources to a user group, scaling from a single lab to a large institution. The BIRCH core distribution includes many popular bioinformatics programs, unified within the GDE (Genetic Data Environment) graphic interface. Of equal importance, BIRCH provides the system administrator with tools that simplify the job of managing a multiuser bioinformatics system across different platforms and operating systems. These include tools for integrating locally-installed programs and databases into BIRCH, and for customizing the local BIRCH system to meet the needs of the user base. BIRCH can also act as a front end to provide a unified view of already-existing collections of bioinformatics software. Documentation for the BIRCH and locally-added programs is merged in a hierarchical set of web pages. In addition to manual pages for individual programs, BIRCH tutorials employ step by step examples, with screen shots and sample files, to illustrate both the important theoretical and practical considerations behind complex analytical tasks. Conclusion BIRCH provides a versatile organizational framework for managing software and databases, and making these accessible to a user base. Because of its network-centric design, BIRCH makes it possible for any user to do any task from anywhere. PMID:17291351

  9. BIRCH: A user-oriented, locally-customizable, bioinformatics system

    Directory of Open Access Journals (Sweden)

    Fristensky Brian

    2007-02-01

    Full Text Available Abstract Background Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be challenging, pipelining data from one program to the next is particularly awkward, especially when using web-based programs. At the same time, system administrators tasked with maintaining these tools do not always appreciate the needs of research biologists. Results BIRCH (Biological Research Computing Hierarchy is an organizational framework for delivering bioinformatics resources to a user group, scaling from a single lab to a large institution. The BIRCH core distribution includes many popular bioinformatics programs, unified within the GDE (Genetic Data Environment graphic interface. Of equal importance, BIRCH provides the system administrator with tools that simplify the job of managing a multiuser bioinformatics system across different platforms and operating systems. These include tools for integrating locally-installed programs and databases into BIRCH, and for customizing the local BIRCH system to meet the needs of the user base. BIRCH can also act as a front end to provide a unified view of already-existing collections of bioinformatics software. Documentation for the BIRCH and locally-added programs is merged in a hierarchical set of web pages. In addition to manual pages for individual programs, BIRCH tutorials employ step by step examples, with screen shots and sample files, to illustrate both the important theoretical and practical considerations behind complex analytical tasks. Conclusion BIRCH provides a versatile organizational framework for managing software and databases, and making these accessible to a user base. Because of its network-centric design, BIRCH makes it possible for any user to do any task from anywhere.

  10. Climate change effect on Betula (birch) and Quercus (oak) pollen seasons in the United States

    Science.gov (United States)

    Zhang, Yong; Bielory, Leonard; Georgopoulos, Panos G.

    2014-07-01

    Climatic change is expected to affect the spatiotemporal patterns of airborne allergenic pollen, which has been found to act synergistically with common air pollutants, such as ozone, to cause allergic airway disease (AAD). Observed airborne pollen data from six stations from 1994 to 2011 at Fargo (North Dakota), College Station (Texas), Omaha (Nebraska), Pleasanton (California), Cherry Hill and Newark (New Jersey) in the US were studied to examine climate change effects on trends of annual mean and peak value of daily concentrations, annual production, season start, and season length of Betula (birch) and Quercus (oak) pollen. The growing degree hour (GDH) model was used to establish a relationship between start/end dates and differential temperature sums using observed hourly temperatures from surrounding meteorology stations. Optimum GDH models were then combined with meteorological information from the Weather Research and Forecasting (WRF) model, and land use land coverage data from the Biogenic Emissions Land use Database, version 3.1 (BELD3.1), to simulate start dates and season lengths of birch and oak pollen for both past and future years across the contiguous US (CONUS). For most of the studied stations, comparison of mean pollen indices between the periods of 1994-2000 and 2001-2011 showed that birch and oak trees were observed to flower 1-2 weeks earlier; annual mean and peak value of daily pollen concentrations tended to increase by 13.6 %-248 %. The observed pollen season lengths varied for birch and for oak across the different monitoring stations. Optimum initial date, base temperature, and threshold GDH for start date was found to be 1 March, 8 °C, and 1,879 h, respectively, for birch; 1 March, 5 °C, and 4,760 h, respectively, for oak. Simulation results indicated that responses of birch and oak pollen seasons to climate change are expected to vary for different regions.

  11. Modelling tree biomasses in Finland

    Energy Technology Data Exchange (ETDEWEB)

    Repola, J.

    2013-06-01

    Biomass equations for above- and below-ground tree components of Scots pine (Pinus sylvestris L), Norway spruce (Picea abies [L.] Karst) and birch (Betula pendula Roth and Betula pubescens Ehrh.) were compiled using empirical material from a total of 102 stands. These stands (44 Scots pine, 34 Norway spruce and 24 birch stands) were located mainly on mineral soil sites representing a large part of Finland. The biomass models were based on data measured from 1648 sample trees, comprising 908 pine, 613 spruce and 127 birch trees. Biomass equations were derived for the total above-ground biomass and for the individual tree components: stem wood, stem bark, living and dead branches, needles, stump, and roots, as dependent variables. Three multivariate models with different numbers of independent variables for above-ground biomass and one for below-ground biomass were constructed. Variables that are normally measured in forest inventories were used as independent variables. The simplest model formulations, multivariate models (1) were mainly based on tree diameter and height as independent variables. In more elaborated multivariate models, (2) and (3), additional commonly measured tree variables such as age, crown length, bark thickness and radial growth rate were added. Tree biomass modelling includes consecutive phases, which cause unreliability in the prediction of biomass. First, biomasses of sample trees should be determined reliably to decrease the statistical errors caused by sub-sampling. In this study, methods to improve the accuracy of stem biomass estimates of the sample trees were developed. In addition, the reliability of the method applied to estimate sample-tree crown biomass was tested, and no systematic error was detected. Second, the whole information content of data should be utilized in order to achieve reliable parameter estimates and applicable and flexible model structure. In the modelling approach, the basic assumption was that the biomasses of

  12. Effect of Tree Species on Enzyme Secretion by the Shiitake Medicinal Mushroom, Lentinus edodes (Agaricomycetes).

    Science.gov (United States)

    Plotnikov, Evgeny V; Glukhova, Lubov B; Sokolyanskaya, Ludmila O; Karnachuk, Olga V; Solioz, Marc

    2016-01-01

    We compared cold and hot wood extracts of 3 endemic Siberian trees-namely, Prunus padus (bird cherry), Populus tremula (aspen), and Betula sp. (birch)-on biomass production and laccase and peroxidase secretion in submerged cultures by the medicinal mushroom Lentinus edodes. Of the conditions tested, only hot Prunus extracts stimulated biomass production, whereas all extracts stimulated laccase and peroxidase secretion, albeit to different extents. A large, differential stimulation of manganese peroxidase was observed by hot Prunus extracts. The results highlight important differences between tree species in the stimulation of biomass and enzyme production by L. edodes and point to potentially interesting stimulatory factors present in hot Prunus extracts. These findings are of relevance in the use of L. edodes for medicinal or biotechnological applications.

  13. Establishing an Alaskan birch syrup industry: Birch Syrup—It’s the Un-maple!TM

    Science.gov (United States)

    Marlene. Cameron

    2001-01-01

    Ten years ago a small group of Alaskans began commercial production of birch syrup from the sap of the paper birch, Betula papyrifera, and established an industry that is expanding in response to demand and has the potential to make a significant contribution to Alaska's economy. There are still many problems to be solved; research and...

  14. Influence of mycorrhizal associations on paper birch and jack pine seedlings when exposed to elevated copper, nickel or aluminium

    Energy Technology Data Exchange (ETDEWEB)

    Jones, M.D.; Browning, M.H.R.; Hutchinson, T.C.

    1986-10-01

    Acid deposition may adversely affect northern forest ecosystems by increasing the concentration of metals in the soil solution. This study investigates the effects of ectomycorrhizal fungi on paper birch and jack pine seedlings exposed to elevated Cu, Ni or Al in sand culture. One of four mycorrhizal fungi, Scleroderma flavidum, was able to reduce Ni toxicity to the birch seedlings. It did this by reducing transport of Ni to the stems. None of the fungi affected Cu toxicity in birch. In separate experiments, jack pine seedlings were exposed to combinations of Al and Ca. Infection with Rhizopogon rubescens increased seedling susceptibility to Al. Seedlings inoculated with Suillus tomentosus showed a greater growth stimulation by Ca than uninoculated jack pines. Thus, for both tree species, the mycorrhizal association could alter the response of seedlings to high concentrations of certain metals, although this varied with fungal species. 8 references.

  15. Levels of selected trace elements in Scots pine (Pinus sylvestris L.), silver birch (Betula pendula L.), and Norway maple (Acer platanoides L.) in an urbanized environment.

    Science.gov (United States)

    Kosiorek, Milena; Modrzewska, Beata; Wyszkowski, Mirosław

    2016-10-01

    The aim of the study was to determine the concentrations of selected trace elements in needles and bark of Scots pine (Pinus sylvestris L.), leaves and bark of silver birch (Betula pendula L.), and Norway maple (Acer platanoides L.), as well as in the soil in which the trees grew, depending on their localization and hence the distribution of local pollution sources. The content of trace elements in needles of Scots pine, leaves of silver birch, and Norway maple and in bark of these trees depended on the location, tree species, and analyzed organ. The content of Fe, Mn, and Zn in needles, leaves, and bark of the examined tree species was significantly higher than that of the other elements. The highest average content of Fe and Mn was detected in leaves of Norway maple whereas the highest average content of Zn was found in silver birch leaves. The impact of such locations as the center of Olsztyn or roadside along Road 51 on the content of individual elements tended to be more pronounced than the influence of the other locations. The influence of the sampling sites on the content of trace elements in tree bark was less regular than the analogous effect in needles and leaves. Moreover, the relevant dependences were slightly different for Scots pine than for the other two tree species. The concentrations of heavy metals determined in the soil samples did not exceed the threshold values set in the Regulation of the Minister for the Environment, although the soil along Road 51 and in the center of Olsztyn typically had the highest content of these elements. There were also significant correlations between the content of some trace elements in soil and their accumulation in needles, leaves, and bark of trees.

  16. Evaluation of a New Temporary Immersion Bioreactor System for Micropropagation of Cultivars of Eucalyptus, Birch and Fir

    Directory of Open Access Journals (Sweden)

    Edward Businge

    2017-06-01

    Full Text Available The use of liquid instead of solid culture medium for the micropropagation of plants offers advantages such as better access to medium components and scalability through possible automation of the processes. The objective of this work was to compare a new temporary immersion bioreactor (TIB to solid medium culture for the micropropagation of a selection of tree species micropropagated for commercial use: Nordmann fir (Abies nordmanniana (Steven Spach, Eucalyptus (E. grandis x E. urophylla, Downy birch (Betula pubescens Ehrh, and Curly birch (Betula pendula var. carelica. Cultivation of explants in the TIB resulted in a significant increase of multiplication rate and fresh weight of Eucalyptus and B. pendula, but not Betula pubescens. In addition, the fresh weight of embryogenic tissue and the maturation frequency of somatic embryos increased significantly when an embryogenic cell line of A. nordmanniana was cultivated in the TIB compared to solid culture medium. These results demonstrate the potential for scaling up and automating micropropagation by shoot multiplication and somatic embryogenesis in commercial tree species using a temporary immersion bioreactor.

  17. Christian Birch - den korrupte konferensråd

    DEFF Research Database (Denmark)

    Jensen, Mette Frisk

    2005-01-01

      http://www.sidensaxo.dk/fileadmin/saxo-abstract-uploads/christian_birch_den_korrupte_konferensraad_2005_3.pdf......  http://www.sidensaxo.dk/fileadmin/saxo-abstract-uploads/christian_birch_den_korrupte_konferensraad_2005_3.pdf...

  18. Nitrous oxide fluxes from forest floor, tree stems and canopies of boreal tree species during spring

    Science.gov (United States)

    Haikarainen, Iikka; Halmeenmäki, Elisa; Machacova, Katerina; Pihlatie, Mari

    2017-04-01

    Boreal forests are considered as small sources of atmospheric nitrous oxide (N2O) due to microbial N2O production in the soils. Recent evidence shows that trees may play an important role in N2O exchange of forest ecosystems by offering pathways for soil produced N2O to the atmosphere. To confirm magnitude, variability and the origin of the tree mediated N2O emissions more research is needed, especially in boreal forests which have been in a minority in such investigation. We measured forest floor, tree stem and shoot N2O exchange of three boreal tree species at the beginning of the growing season (13.4.-13.6.2015) at SMEAR II station in Hyytiälä, located in Southern Finland (61˚ 51´N, 24˚ 17´E, 181 a.s.l.). The fluxes were measured in silver birch (Betula pendula), downy birch (B. pubescens) and Norway spruce (Picea abies) on two sites with differing soil type and characteristics (paludified and mineral soil), vegetation cover and forest structure. The aim was to study the vertical profile of N2O fluxes at stem level and to observe temporal changes in N2O fluxes over the beginning of the growing season. The N2O exchange was determined using the static chamber technique and gas chromatographic analyses. Scaffold towers were used for measurements at multiple stem heights and at the canopy level. Overall, the N2O fluxes from the forest floor and trees at both sites were very small and close to the detection limit. The measured trees mainly emitted N2O from their stems and shoots, while the forest floor acted as a sink of N2O at the paludified site and as a small source of N2O at the mineral soil site. Stem emissions from all the trees at both sites were on average below 0.5 μg N2O m-2 of stem area h-1, and the shoot emissions varied between 0.2 and 0.5 ng N2O m-2 g-1 dry biomass. When the N2O fluxes were scaled up to the whole forest ecosystem, based on the tree biomass and stand density, the N2O emissions from birch and spruce trees at the paludified site

  19. Table of 3D organ model IDs and organ names (PART-OF Tree) - BodyParts3D | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us BodyParts3D Table of 3D organ model IDs and organ names (PART-OF Tree) Data detail Data name Table of 3D org...an model IDs and organ names (PART-OF Tree) DOI 10.18908/lsdba.nbdc00837-002 Description of ...data contents List of downloadable 3D organ models in a tab-delimited text file format, describing the correspondence between 3D org...an model IDs and organ names available in PART-OF Tree. D...atabase Site Policy | Contact Us Table of 3D organ model IDs and organ names (PART-OF Tree) - BodyParts3D | LSDB Archive ...

  20. Large-Scale Variations in Lumber Value Recovery of Yellow Birch and Sugar Maple in Quebec, Canada.

    Science.gov (United States)

    Hassegawa, Mariana; Havreljuk, Filip; Ouimet, Rock; Auty, David; Pothier, David; Achim, Alexis

    2015-01-01

    Silvicultural restoration measures have been implemented in the northern hardwoods forests of southern Quebec, Canada, but their financial applicability is often hampered by the depleted state of the resource. To help identify sites most suited for the production of high quality timber, where the potential return on silvicultural investments should be the highest, this study assessed the impact of stand and site characteristics on timber quality in sugar maple (Acer saccharum Marsh.) and yellow birch (Betula alleghaniensis Britt.). For this purpose, lumber value recovery (LVR), an estimate of the summed value of boards contained in a unit volume of round wood, was used as an indicator of timber quality. Predictions of LVR were made for yellow birch and sugar maple trees contained in a network of more than 22000 temporary sample plots across the Province. Next, stand-level variables were selected and models to predict LVR were built using the boosted regression trees method. Finally, the occurrence of spatial clusters was verified by a hotspot analysis. Results showed that in both species LVR was positively correlated with the stand age and structural diversity index, and negatively correlated with the number of merchantable stems. Yellow birch had higher LVR in areas with shallower soils, whereas sugar maple had higher LVR in regions with deeper soils. The hotspot analysis indicated that clusters of high and low LVR exist across the province for both species. Although it remains uncertain to what extent the variability of LVR may result from variations in past management practices or in inherent site quality, we argue that efforts to produce high quality timber should be prioritized in sites where LVR is predicted to be the highest.

  1. Inter- and intra-specific responses to elevated ozone and chamber climate in northern birches.

    Science.gov (United States)

    Manninen, S; Huttunen, S; Vanhatalo, M; Pakonen, T; Hämäläinen, A

    2009-05-01

    We studied the responses of micropropagated, northern provenances of downy, mountain and silver birches to elevated ozone (O(3)) and changing climate using open-top chambers (OTCs). Contrary to our hypothesis, northern birches were sensitive to O(3), i.e. O(3) levels of 31-36 ppb reduced the leaf and root biomasses by -10%, whereas wood biomass was affected to a lesser extent. The warmer and drier OTC climate enhanced growth in general, though there were differences among the species and clones, e.g. in bud burst and biomass production. Inter- and intra-specific responses to O(3) and changing climate relate to traits such as allocation patterns between the above- and belowground parts (i.e. root/shoot ratio), which further relate to nutrient and water economy. Our experiments may have mimicked future conditions quite well, but only long-term field studies can yield the information needed to forecast responses at both tree and ecosystem levels.

  2. The variation of methane flux rates from boreal tree species at the beginning of the growing season

    Science.gov (United States)

    Haikarainen, Iikka; Halmeenmäki, Elisa; Machacova, Katerina; Pihlatie, Mari

    2016-04-01

    Boreal forests are considered as net sink for atmospheric methane (CH4) because of the CH4 oxidizing bacteria in the aerobic soil layer. However, within the last decades it has become more evident that trees play an important role in the global CH4 budget by offering pathways for anaerobically produced CH4 from deeper soil layers to the atmosphere. Furthermore, trees may also act as independent sources of CH4. To confirm magnitude, variability and the origin of the tree mediated CH4 emissions more research is needed, especially in boreal forests which have been in a minority in such investigation. We measured tree stem and shoot CH4 exchange of three boreal tree species at the beginning of the growing season (13.4.-13.6.2015) at SMEAR II station in Hyytiälä, located in southern Finland (61° 51'N, 24° 17'E, 181 asl). The fluxes were measured from silver birch (Betula pendula), downy birch (B. pubescens) and Norway spruce (Picea abies) on two sites with differing soil type and characteristics (paludified and mineral soil), vegetation and forest structure by using the static chamber technique. Scaffold towers were used for measurements at multiple stem heights and shoots. The aim was to study the vertical profile of CH4 fluxes at stem and shoot level and compare these fluxes among the studied species, and to observe temporal changes in CH4 flux over the beginning of the growing season. We found that all the trees emitted CH4 from their stems and shoots. Overall, the birches showed higher emissions compared to the spruces. The emission rates were considerably larger in the lower parts of the birch stems than upper parts, and these emissions increased during the growing season. The spruces had more variation in the stem CH4 flux, but the emission rates of the upper parts of the stem exceeded the birch emissions at the same height. The shoot fluxes of all the studied trees indicated variable CH4 emissions without a clear pattern regarding the vertical profile and

  3. Rapid Crustal Uplift at Birch Bay, Washington

    Science.gov (United States)

    Sherrod, B. L.; Kelsey, H. M.; Blakely, R. J.

    2010-12-01

    Geomorphology and coastal marsh stratigraphy suggest late Holocene uplift of the shoreline at Birch Bay, located northwest of Bellingham, Washington, during an earthquake on a shallow fault. LiDAR images show a raised, late Holocene shoreline along Birch Bay, with ~1 m of elevation difference between the modern shoreline and the inferred paleoshoreline. Commercial seismic reflection images reveal an anticline in Tertiary and possibly Quaternary deposits underlying Birch Bay. NW-trending magnetic anomalies are likely associated with the Birch Bay anticline and other nearby structures. Taken together, the geophysical data and lidar images suggest uplift of young deposits along a NW-trending blind reverse fault. Stratigraphy from Terrell Creek marsh, located just south of Birch Bay, shows freshwater peat buried by lower intertidal muds, indicating local submergence ~1300 yr BP. Stratigraphy of a 70-cm sediment core from Birch Bay marsh, sitting astride the anticline imaged with seismic reflection data, shows mud buried by detrital peat. One radiocarbon age from the core places the abrupt change from mud to peat prior to 1520-1700 yr BP. We divide fossil diatom assemblages straddling the mud-peat contact at Birch Bay into three zones. The oldest zone consists primarily of intertidal and marine diatoms, dominated by Paralia sulcata, Scoleoneis tumida, Grammataphora oceanica, and Gyrosigma balticum. An intermediate zone, beginning at the sharp contact between mud and overlying peat, consists of a mixture of brackish marsh and freshwater species, dominated by Diploneis interrupta, with lesser amounts of Aulacoseira sp., Pinnularia viridis, Eunotia pectinalis, and Paralia sulcata. A third and youngest zone lies in the upper half of the peat and is dominated by poorly preserved freshwater diatoms, mostly Aulacoseira cf. crassapuntata, Pinnularia viridis, P. maior, Eunotia pectinalis, and E. praerupta. Paleoecological inferences, based on distributions of modern diatoms

  4. Some Physical and Mechanical Properties of African Birch ...

    African Journals Online (AJOL)

    PROF HORSFALL

    Also, strength properties of African birch timber perpendicular to grain ... Air dried African birch (Anogeissus leiocarpus) ..... Forest Product Research Labouratory. ... America. 001 – 589. Ikram Mohamed, EE; Abdel Khalig, M; Hiba, AA;. Saad ...

  5. Growth and Yield of 15-Year Plantations of Pine, Spruce and Birch in Agricultural Land

    Directory of Open Access Journals (Sweden)

    Daugaviete Mudrite

    2017-07-01

    Full Text Available The growth data and the potential returns from 15-year-old plantations of pine Pinus sylvestris L. (6 trial sites, spruce Picea abies Karst L. (9 trial sites and silver birch Betula pendula Roth (13 trial sites, established in abandoned agricultural lands in a variety of soil types (sod calcareous, anthrosols, podzolic, podzols, gley, podzolic gley, alluvial, using the planting density 2,500 and 3,300 and also 5,000 trees/ha are analysed.

  6. Large-Scale Variations in Lumber Value Recovery of Yellow Birch and Sugar Maple in Quebec, Canada.

    Directory of Open Access Journals (Sweden)

    Mariana Hassegawa

    Full Text Available Silvicultural restoration measures have been implemented in the northern hardwoods forests of southern Quebec, Canada, but their financial applicability is often hampered by the depleted state of the resource. To help identify sites most suited for the production of high quality timber, where the potential return on silvicultural investments should be the highest, this study assessed the impact of stand and site characteristics on timber quality in sugar maple (Acer saccharum Marsh. and yellow birch (Betula alleghaniensis Britt.. For this purpose, lumber value recovery (LVR, an estimate of the summed value of boards contained in a unit volume of round wood, was used as an indicator of timber quality. Predictions of LVR were made for yellow birch and sugar maple trees contained in a network of more than 22000 temporary sample plots across the Province. Next, stand-level variables were selected and models to predict LVR were built using the boosted regression trees method. Finally, the occurrence of spatial clusters was verified by a hotspot analysis. Results showed that in both species LVR was positively correlated with the stand age and structural diversity index, and negatively correlated with the number of merchantable stems. Yellow birch had higher LVR in areas with shallower soils, whereas sugar maple had higher LVR in regions with deeper soils. The hotspot analysis indicated that clusters of high and low LVR exist across the province for both species. Although it remains uncertain to what extent the variability of LVR may result from variations in past management practices or in inherent site quality, we argue that efforts to produce high quality timber should be prioritized in sites where LVR is predicted to be the highest.

  7. Solar ultraviolet radiation alters alder and birch litter chemistry that in turn affects decomposers and soil respiration.

    Science.gov (United States)

    Kotilainen, Titta; Haimi, Jari; Tegelberg, Riitta; Julkunen-Tiitto, Riitta; Vapaavuori, Elina; Aphalo, Pedro Jose

    2009-10-01

    Solar ultraviolet (UV)-A and UV-B radiation were excluded from branches of grey alder (Alnus incana) and white birch (Betula pubescens) trees in a field experiment. Leaf litter collected from these trees was used in microcosm experiments under laboratory conditions. The aim was to evaluate the effects of the different UV treatments on litter chemical quality (phenolic compounds, C, N and lignin) and the subsequent effects of these changes on soil fauna and decomposition processes. We measured the decomposition rate of litter, growth of woodlice (Porcellio scaber), soil microbial respiration and abundance of nematodes and enchytraeid worms. In addition, the chemical quality of woodlice feces was analyzed. The exclusion of both UV-A and UV-B had several effects on litter chemistry. Exclusion of UV-B radiation decreased the C content in litter in both tree species. In alder litter, UV exclusion affected concentration of phenolic groups variably, whereas in birch litter there were no significant differences in phenolic compounds. Moreover, further effects on microbial respiration and chemical quality of woodlice feces were apparent. In both tree species, microbial CO(2) evolution was lower in soil with litter produced under exclusion of both UV-A and UV-B radiation when compared to soil with control litter. The N content was higher in the feces of woodlice eating alder litter produced under exclusion of both UV-A and UV-B compared to the control. In addition, there were small changes in the concentration of individual phenolic compounds analyzed from woodlice feces. Our results demonstrate that both UV-A and UV-B alter litter chemistry which in turn affects decomposition processes.

  8. Columnar apple tree named 'Moonlight'

    OpenAIRE

    Tupý, J. (Jaroslav); Louda, O. (Otto); Zima, J. (Jan)

    2010-01-01

    A new and distinct Malus domestica (Borkh.) apple tree variety is provided which exhibits a columnar tree type, weakly vigorous compact growth, predominant bearing on spurs and V.sub.f-resistance against scab. The new variety yields late maturing, medium-sized, globose-conical to conical fruits having good storage quality. The fruit color is yellow-green to yellow with a partial red to orange blush. The fruits have a yellow-colored firm flesh that is crisp and juicy with a good sweet/sour bal...

  9. Root-Crown Relations of Young Sugar Maple and Yellow Birch

    Science.gov (United States)

    Carl H. Tubbs

    1977-01-01

    Young forest-grown sugar maple and yellow birch (1 to 6 inches d.b.h.) crowns were mapped and roots excavated. Crown dimensions were compared. Sugar maple roots usually terminated within a few feet of the crown perimeter. Yellow birch roots frequently terminated well outside crown perimeters and roots of birch were more irregularly distributed than those of maple....

  10. Concentrations of dissolved organic carbon along an altitudinal gradient from Norway spruce forest to the mountain birch/alpine ecotone in Norway

    Energy Technology Data Exchange (ETDEWEB)

    Clarke, N.; Roesberg, I.; Aamlid, D.

    2005-07-01

    Concentrations of dissolved organic carbon (DOC) in soil water from the base of the soil organic layer were determined at three forest plots along an altitudinal gradient in eastern Norway. The lowest plot, at 830 m above sea level (a.s.l.), was in Norway spruce forest and there were additional plots at the ecotone between Norway spruce and mountain birch at 925 m a.s.l. and at the forest line (1000 m a.s.l.). DOC concentrations in soil water did not decrease uniformly with altitude although tree biomass, above-ground litterfall and the soil C pool all did so. Significant correlations between DOC and (H{sup +}) or electrical conductivity may reflect the contribution of DOC to solution acidity and the anionic charge, respectively. If mean temperature during the growing season increases, tree growth at any given altitude will tend to increase and the spruce-birch ecotone may move to a higher altitude than at present. Increased C inputs as litter to the soil might then lead to increasing DOC concentrations and fluxes in surface waters. (orig.)

  11. Birch pollen allergy: molecular characterization and hypoallergenic products

    NARCIS (Netherlands)

    Schenk, M.F.

    2008-01-01

    Allergic diseases, such as hay fever and food allergy, affect a substantial part of the population in westernized countries. Pollen of the European white birch (Betula pendula) is a considerable cause of hay fever (seasonal allergic rhinitis) in northern and central Europe. The major birch pollen

  12. Analytical approaches to the determination of simple biophenols in forest trees such as Acer (maple), Betula (birch), Coniferus, Eucalyptus, Juniperus (cedar), Picea (spruce) and Quercus (oak).

    Science.gov (United States)

    Bedgood, Danny R; Bishop, Andrea G; Prenzler, Paul D; Robards, Kevin

    2005-06-01

    Analytical methods are reviewed for the determination of simple biophenols in forest trees such as Acer (maple), Betula (birch), Coniferus, Eucalyptus, Juniperus (cedar), Picea (spruce) and Quercus (oak). Data are limited but nevertheless clearly establish the critical importance of sample preparation and pre-treatment in the analysis. For example, drying methods invariably reduce the recovery of biophenols and this is illustrated by data for birch leaves where flavonoid glycosides were determined as 12.3 +/- 0.44 mg g(-1) in fresh leaves but 9.7 +/- 0.35 mg g(-1) in air-dried samples (data expressed as dry weight). Diverse sample handling procedures have been employed for recovery of biophenols. The range of biophenols and diversity of sample types precludes general procedural recommendations. Caution is necessary in selecting appropriate procedures as the high reactivity of these compounds complicates their analysis. Moreover, our experience suggests that their reactivity is very dependent on the matrix. The actual measurement is less contentious and high performance separation methods particularly liquid chromatography dominate analyses whilst coupled techniques involving electrospray ionization are becoming routine particularly for qualitative applications. Quantitative data are still the exception and are summarized for representative species that dominate the forest canopy of various habitats. Reported concentrations for simple phenols range from trace level (<0.1 microg g(-1)) to in excess of 500 microg g(-1) depending on a range of factors. Plant tissue is one of these variables but various biotic and abiotic processes such as stress are also important considerations.

  13. Promotion of adventitious root formation of difficult-to-root hardwood tree species

    Science.gov (United States)

    Paula M. Pijut; Keith E. Woeste; Charles H. Michler

    2011-01-01

    North American hardwood tree species, such as alder (Alnus spp.), ash (Fraxinus spp.), basswood (Tilia spp.), beech (Fagus spp.), birch (Betula spp.), black cherry (Prunus seratina), black walnut (Juglans nigra), black willow (...

  14. The Banyan and the Birch Tree

    DEFF Research Database (Denmark)

    Lorenzen, Mark; Taeube, Florian A.

    Theoretical and empirical research on entrepreneurial networks is largely outcome-oriented and little integrated with family firm research. In this paper, we draw on social network and entrepreneurship literatures in order to investigate how family businesses build and make use of a variety...... of embedded and arm's-length ties. We present novel data self-collected in qualitative, inductive fieldwork from more than 50 interviews in mainstream film production in Bollywood. Our findings contrast with extant research by showing that in the socio-cultural context of India the use of embedded ties...... is higher than predictions in the theoretical literature and empirical findings in cross-country studies suggest. Moreover, we show that the ‘Indian' family is an institution that dominates embedded ties. The Banyan tree symbolizes this interconnectedness of the different branches of an Indian family...

  15. m-BIRCH: an online clustering approach for computer vision applications

    Science.gov (United States)

    Madan, Siddharth K.; Dana, Kristin J.

    2015-03-01

    We adapt a classic online clustering algorithm called Balanced Iterative Reducing and Clustering using Hierarchies (BIRCH), to incrementally cluster large datasets of features commonly used in multimedia and computer vision. We call the adapted version modified-BIRCH (m-BIRCH). The algorithm uses only a fraction of the dataset memory to perform clustering, and updates the clustering decisions when new data comes in. Modifications made in m-BIRCH enable data driven parameter selection and effectively handle varying density regions in the feature space. Data driven parameter selection automatically controls the level of coarseness of the data summarization. Effective handling of varying density regions is necessary to well represent the different density regions in data summarization. We use m-BIRCH to cluster 840K color SIFT descriptors, and 60K outlier corrupted grayscale patches. We use the algorithm to cluster datasets consisting of challenging non-convex clustering patterns. Our implementation of the algorithm provides an useful clustering tool and is made publicly available.

  16. Vegetation of birch and aspen forests in the Pinega State Reserve

    Directory of Open Access Journals (Sweden)

    Sergey Yu. Popov

    2017-05-01

    Full Text Available The Pinega State Nature Reserve (Russia is located in the Arkhangelsk region in the northern taiga subzone. Together with spruce forests and mires, birch forests represent one of the most wide-spread plant communities of its territory. Birch forests cover 24.6% of the Reserve's area. Aspen forests are rare plant communities in the Pinega Reserve. These forests cover only 0.9% of the whole Reserve's area. The birch and aspen forests vegetation has been classified based on 82 relevès. Eleven associations could be distinguished, which represent six groups of associations. Detailed characteristics of these syntaxa are provided including their biodiversity analysis. The analysis allowed establishing that the revealed syntaxa differ in relation to habitat environmental conditions: e.g., soil moisture, trophicity, nitrogen saturation and soil acidity. Sphagnum and blueberry birch forests proved to be the poorest in nitrogen, in contrast to the richest humidoherbaceous and broad-grassed groups of birch forest associations. Broad-grassed birch forests in the Pinega Reserve inhabit the most drained locations, while humidoherbaceous and Sphagnum forests occur in lesser drained locations.

  17. Mercury levels in lichens from different host trees around a chlor-alkali plant in New Brunswick, Canada.

    Science.gov (United States)

    Sensen, Marion; Richardson, David H S

    2002-07-03

    Mercury concentrations were determined in the epiphytic lichen Hypogymnia physodes along five transects starting from a chlor-alkali plant located at Dalhousie, New Brunswick, a landfill site and a nearby electricity generating station. Lichen samples were collected from white birch (Betula papyrifera) and spruce (Picea sp.) or balsam fir (Abies balsamea). Average lichen background mercury values were 0.088+/-0.005 microg/g from white birch and 0.148+/-0.046 microg/g from spruce trees, with a detection limit of 0.05 microg/g. The chlor-alkali plant and a power plant were identified, respectively, as a major source and a minor source of elevated mercury levels in lichens. At 125 m north-west of the New Brunswick Power plant, 0.28 microg/g Hg were found in Hypogymnia physodes from spruce trees, while at 250 m west (downwind) of the chlor-alkali plant, 3.66 microg/g of mercury were determined. High values, 0.98 microg/g in lichens from spruce trees and 0.79 microg/g in lichen samples from white birch were also measured at 125 m south of the chlor-alkali plant and decreased exponentially with distance. The sphere of influence of the chlor-alkali plant with respect to mercury deposition was estimated to extend 2.4-3.4 km from the plant. The mercury concentrations in Hypogymnia physodes collected from white birch were significantly lower than the concentrations in the same lichen from spruce trees in areas with elevated levels of mercury, but not in areas with low mercury levels. The magnitude of this difference dropped with distance from the source.

  18. Contrasting drivers and trends of coniferous and deciduous tree growth in interior Alaska.

    Science.gov (United States)

    Cahoon, Sean M P; Sullivan, Patrick F; Brownlee, Annalis H; Pattison, Robert R; Andersen, Hans-Erik; Legner, Kate; Hollingsworth, Teresa N

    2018-03-22

    The boreal biome represents approximately one third of the world's forested area and plays an important role in global biogeochemical and energy cycles. Numerous studies in boreal Alaska have concluded that growth of black and white spruce is declining as a result of temperature-induced drought stress. The combined evidence of declining spruce growth and changes in the fire regime that favor establishment of deciduous tree species has led some investigators to suggest the region may be transitioning from dominance by spruce to dominance by deciduous forests and/or grasslands. Although spruce growth trends have been extensively investigated, few studies have evaluated long-term radial growth trends of the dominant deciduous species (Alaska paper birch and trembling aspen) and their sensitivity to moisture availability. We used a large and spatially extensive sample of tree cores from interior Alaska to compare long-term growth trends among contrasting tree species (white and black spruce vs. birch and aspen). All species showed a growth peak in the mid-1940s, although growth following the peak varied strongly across species. Following an initial decline from the peak, growth of white spruce showed little evidence of a trend, while black spruce and birch growth showed slight growth declines from ~1970 to present. Aspen growth was much more variable than the other species and showed a steep decline from ~1970 to present. Growth of birch, black and white spruce was sensitive to moisture availability throughout most of the tree-ring chronologies, as evidenced by negative correlations with air temperature and positive correlations with precipitation. However, a positive correlation between previous July precipitation and aspen growth disappeared in recent decades, corresponding with a rise in the population of the aspen leaf miner (Phyllocnistis populiella), an herbivorous moth, which may have driven growth to a level not seen since the early 20th century. Our results

  19. Birch symposium proceedings

    Science.gov (United States)

    W.T. Doolittle; P.E. Bruns

    1969-01-01

    This symposium on yellow and paper birch is the third in a series of meetings devoted to discussion of our fine hardwood timber species. The first meeting, held at Carbondale, Illinois, in 1966, dealt with black walnut. The second, held at Houghton, Michigan, in 1968, dealt with sugar maple. The purpose of this third meeting is to bring together our present knowledge...

  20. Food allergy to apple and specific immunotherapy with birch pollen

    DEFF Research Database (Denmark)

    Hansen, K.S.; Khinchi, M.S.; Skov, P.S.

    2004-01-01

    Conflicting results concerning the effect of specific pollen immunotherapy (SIT) on allergy to plant foods have been reported. The aim of this study was to investigate the effect of SIT using a birch pollen extract on food allergy with focus on allergy to apple. Seventy-four birch pollen-allergic......Conflicting results concerning the effect of specific pollen immunotherapy (SIT) on allergy to plant foods have been reported. The aim of this study was to investigate the effect of SIT using a birch pollen extract on food allergy with focus on allergy to apple. Seventy-four birch pollen......-allergic patients were included in a double-blind, double-dummy, and placebo-controlled comparison of sublingual-swallow (SLIT) and subcutaneous (SCIT) administration of a birch pollen extract. Sixty-nine percent of these patients reported allergy to apple. The clinical reactivity to apple was evaluated by open...... oral challenges with fresh apple and a questionnaire. The immunoglobulin E (IgE)-reactivity was assessed by skin prick test (SPT), specific IgE, and leukocyte histamine release (HR). Forty patients were included in the final evaluation of the effect of SIT. The challenges were positive in 9 (SCIT), 6...

  1. High correlation of specific IgE sensitization between birch pollen, soy and apple allergens indicates pollen-food allergy syndrome among birch pollen allergic patients in northern China.

    Science.gov (United States)

    Hao, Guo-Dong; Zheng, Yi-Wu; Wang, Zhi-Xiang; Kong, Xing-Ai; Song, Zhi-Jing; Lai, Xu-Xin; Spangfort, Michael D

    2016-05-01

    Birch pollen sensitization and associated pollen-food syndrome among Chinese allergic patients have not been investigated. Sera from 203 allergic patients from the northern part of China and collected during February to July 2014 were investigated. Specific immunoglobulin E (IgE) against birch pollen extract Bet v and major birch pollen allergen Bet v 1 were measured using the ADVIA Centaur. The presence of major apple allergen Mal d 1 and soy bean allergen Gly m 4 specific IgE was measured by ImmunoCAP 100. Among the 203 sera, 34 sera (16.7%) had specific IgE to Bet v and of these, 28 sera (82.4%) contained Bet v 1-specific IgE. Among the 28 sera with Bet v 1-specific IgE, 27 sera (96.4%) contained Mal d 1-specific IgE and 22 sera (78.6%) contained Gly m 4-specific IgE. Of the 34 Bet v-positive sera, 6 sera (17.6%) contained no specific IgE for Bet v 1, Mal d 1, or Gly m 4. Almost all Bet v-positive sera were donated during the birch pollen season. The prevalence of birch allergy among patients visiting health care during pollen season can be as high as 16.7% in Tangshan City. The majority of Chinese birch allergic patients are IgE-sensitized to the major birch pollen allergen Bet v 1 as well as to the major apple allergen Mal d 1 and soy bean allergen Gly m 4. A relatively high number of patients (17.6%) are IgE-sensitized to birch pollen allergen(s) other than Bet v 1. The high prevalence of specific IgE to Mal d 1 and Gly m 4 among Bet v 1-sensitized patients indicates that pollen-food allergy syndrome could be of clinical relevance in China.

  2. Selective suppression of antibody production with the aid of radiolabelled birch pollen allergen

    International Nuclear Information System (INIS)

    Filipp, G.; Biro, G.; Hartung, W.D.; Lehmann, G.

    1981-01-01

    In accordance with the clonal selection theory we intended to prevent the development of artificially induced birch pollen allergy in rabbits with the aid of of the radiolabelled pollen allergen (75-1000 μCi 125 I-pollen/animal) intravenously administered prior to pollen sensitization. The birch pollen allergen, in accordance with Burnet's working hypothesis, reacts only with a genetically determining B cell subpopulation. The fixation of the radiolabelled birch pollen allergen to the receptors of the competent B cell clone causes the lesion of the latter. Compared with the control group, this group of rabbits showed an extensive suppression of anaphylactic reagin-like PCA-antibodies, and haemagglutinating antibodies in the blood as well as in nasal secretion. In addition, we tried to influence the already ongoing synthesis of the antibodies with the aid of a subsequent intravenously administered radiolabelled birch pollen allergen (750-1000μCi 125 I-pollen/animal). An intensive suppression of the synthesis of antibodies could also be proved in this case. The simultaneous immunization of the control rabbits with birch pollen and egg albumin resulted in the production of antibodies against both antigens, as expected. The hot-labelled birch pollen antigen intravenously injected before or after immunization with egg albumin and birch pollen led selectively to suppression of anti-birch-pollen PCA antibodies. The synthesis of anti-egg albumin PCA antibodies was unaffected. (author)

  3. Effects of decadal exposure to interacting elevated CO2 and/or O3 on paper birch (Betula papyrifera) reproduction.

    Science.gov (United States)

    Darbah, Joseph N T; Kubiske, Mark E; Nelson, Neil; Oksanen, Elina; Vapaavuori, Elina; Karnosky, David F

    2008-10-01

    We studied the effects of long-term exposure (nine years) of birch (Betula papyrifera) trees to elevated CO(2) and/or O(3) on reproduction and seedling development at the Aspen FACE (Free-Air Carbon Dioxide Enrichment) site in Rhinelander, WI. We found that elevated CO(2) increased both the number of trees that flowered and the quantity of flowers (260% increase in male flower production), increased seed weight, germination rate, and seedling vigor. Elevated O(3) also increased flowering but decreased seed weight and germination rate. In the combination treatment (elevated CO(2)+O(3)) seed weight is decreased (20% reduction) while germination rate was unaffected. The evidence from this study indicates that elevated CO(2) may have a largely positive impact on forest tree reproduction and regeneration while elevated O(3) will likely have a negative impact.

  4. Oral allergy syndrome to chicory associated with birch pollen allergy

    NARCIS (Netherlands)

    Cadot, P.; Kochuyt, A.-M.; van Ree, R.; Ceuppens, J. L.

    2003-01-01

    BACKGROUND: A few cases of IgE-mediated chicory allergy with oral, cutaneous, and/or respiratory symptoms are reported. We present 4 patients with inhalant birch pollen allergy and oral allergy syndrome to chicory. IgE-binding proteins in chicory and cross-reactivity with birch pollen were studied.

  5. Consumer preferences and willingness to pay for character-marked cabinets from Alaska birch.

    Science.gov (United States)

    Geof Donovan; David. Nicholls

    2003-01-01

    Alaska birch lumber has a higher occurrence of defects (knots, bark pockets, flecks, spalting, etc.) when compared to competing hardwoods. These defects are a disadvantage when birch lumber is graded under standard National Hardwood Lumber Association (NHLA) grading rules. This paper examines whether defects and other character markings found in birch lumber may be an...

  6. High autumn temperature delays spring bud burst in boreal trees, counterbalancing the effect of climatic warming

    Energy Technology Data Exchange (ETDEWEB)

    Heide, O. M. [Agricultural Univesity of Norway, Department of Biology and Nature Conservation, As (Norway)

    2003-09-01

    The effect of temperature during short-day dormancy induction on the duration and stability of bud dormancy was examined in three boreal tree species (2 birches and 1 alder) grown in a controlled environment. The phenology of the latitudinal range of birch populations, and the relationship between spring bud burst and autumn and spring temperatures were also studied. Results showed that during short-day dormancy induction in the autumn high temperatures delayed bud burst in the following spring in both controlled and natural environments. It is suggested that this response to higher autumn temperatures may be a manifestation of a general synergism between high temperature and short-day photoperiodic processes, and may be an adaptive mechanism common to boreal trees. It is further conjectured that this mechanism may be important in counterbalancing the potentially adverse effects of higher winter temperatures on dormancy stability of boreal trees during climate warming. 23 refs., 2 tabs., 4 figs.

  7. A prospective study comparing the efficacy and safety of two sublingual birch allergen preparations

    NARCIS (Netherlands)

    Klimek, Ludger; Sperl, Annette; van Twuijver, Esther; van Ree, Ronald; Kleinjans, Huub; Boot, Johan Diderik; Pfaar, Oliver

    2014-01-01

    Background: SUBLIVAC FIX Birch (SUB-B) is a liquid oral preparation of Betula verrucosa pollen extract for the treatment of allergic rhinitis/rhinoconjuctivitis induced by birch pollen. The major allergen content of SUB-B and Staloral Birch (Stal-B) have been shown to be comparable. In order to

  8. Differences in ecosystem carbon distribution and nutrient cycling linked to forest tree species composition in a mid-successional boreal forest

    Science.gov (United States)

    Melvin, April M.; Mack, Michelle C.; Johnstone, Jill F.; McGuire, A. David; Genet, Helene; Schuur, Edward A.G.

    2015-01-01

    In the boreal forest of Alaska, increased fire severity associated with climate change is expanding deciduous forest cover in areas previously dominated by black spruce (Picea mariana). Needle-leaf conifer and broad-leaf deciduous species are commonly associated with differences in tree growth, carbon (C) and nutrient cycling, and C accumulation in soils. Although this suggests that changes in tree species composition in Alaska could impact C and nutrient pools and fluxes, few studies have measured these linkages. We quantified C, nitrogen, phosphorus, and base cation pools and fluxes in three stands of black spruce and Alaska paper birch (Betula neoalaskana) that established following a single fire event in 1958. Paper birch consistently displayed characteristics of more rapid C and nutrient cycling, including greater aboveground net primary productivity, higher live foliage and litter nutrient concentrations, and larger ammonium and nitrate pools in the soil organic layer (SOL). Ecosystem C stocks (aboveground + SOL + 0–10 cm mineral soil) were similar for the two species; however, in black spruce, 78% of measured C was found in soil pools, primarily in the SOL, whereas aboveground biomass dominated ecosystem C pools in birch forest. Radiocarbon analysis indicated that approximately one-quarter of the black spruce SOL C accumulated prior to the 1958 fire, whereas no pre-fire C was observed in birch soils. Our findings suggest that tree species exert a strong influence over C and nutrient cycling in boreal forest and forest compositional shifts may have long-term implications for ecosystem C and nutrient dynamics.

  9. High-Titer Methane from Organosolv-Pretreated Spruce and Birch

    Directory of Open Access Journals (Sweden)

    Leonidas Matsakas

    2017-02-01

    Full Text Available The negative impact of fossil fuels and the increased demand for renewable energy sources has led to the use of novel raw material sources. Lignocellulosic biomass could serve as a possible raw material for anaerobic digestion and production of biogas. This work is aimed at using forest biomass, both softwood (spruce and hardwood (birch, as a raw material for anaerobic digestion. We examined the effect of different operational conditions for the organosolv pretreatment (ethanol content, duration of treatment, and addition of acid catalyst on the methane yield. In addition, we investigated the effect of addition of cellulolytic enzymes during the digestion. We found that inclusion of an acid catalyst during organosolv pretreatment improved the yields from spruce, but it did not affect the yields from birch. Shorter duration of treatment was advantageous with both materials. Methane yields from spruce were higher with lower ethanol content whereas higher ethanol content was more beneficial for birch. The highest yields obtained were 185 mL CH4/g VS from spruce and 259.9 mL CH4/g VS from birch. Addition of cellulolytic enzymes improved these yields to 266.6 mL CH4/g VS and 284.2 mL CH4/g VS, respectively.

  10. The tree-species-specific effect of forest bathing on perceived anxiety alleviation of young-adults in urban forests

    Directory of Open Access Journals (Sweden)

    Haoming Guan

    2017-12-01

    Full Text Available Forest bathing, i.e. spending time in a forest to walk, view and breathe in a forest, can alleviate the mental depression of visitors, but the tree-species-specific effect of this function by the urban forest is unknown. In this study, sixty-nine university students (aged 19-22, male ratio: 38% were recruited as participants to visit urban forests dominated by birch (Betula platyphylla Suk., maple (Acer triflorum Komarov and oak (Quercus mongolica Fisch. ex Ledeb trees in a park at the center of Changchun City, Northeast China. In the maple forest only the anxiety from study interest was decreased, while the anxiety from employment pressure was alleviated to the most extent in the birch forest. Participants perceived more anxiety from lesson declined in the oak forest than in the birch forest. Body parameters of weight and age were correlated with the anti-anxiety scores. In the oak forest, female participants can perceive more anxiety alleviation than male participants. For university students, forest bathing in our study can promote their study interest. Forest bathing can be more effective to alleviate the anxiety of young adults with greater weight. The birch forest was recommended to be visited by students to alleviate the pressure of employment worry, and the oak forest was recommended to be visited by girls.

  11. Physiological, morphological and allocational plasticity in understory deciduous trees: importance of plant size and light availability.

    Science.gov (United States)

    Delagrange, Sylvain; Messier, Christian; Lechowicz, Martin J; Dizengremel, Pierre

    2004-07-01

    In a 4-year study, we investigated changes in leaf physiology, crown morphology and whole-tree biomass allocation in seedlings and saplings of shade-tolerant sugar maple (Acer saccharum Marsh.) and intermediate shade-tolerant yellow birch (Betula alleghaniensis Britt.) growing in natural understory light (0.5 to 35% of full sunlight) or in understory light reduced by 50% with shade nets to simulate the effect of gap closure. Leaf physiological parameters were mainly influenced by the light gradient, whereas crown morphological and whole-tree allocational parameters were mainly influenced by tree size. No single physiological, morphological or allocational trait was identified that could explain the difference in shade tolerance between the species. Yellow birch had higher growth rates, biomass allocation to branches and leaf physiological plasticity and lower crown morphological plasticity in unmodified understory light than sugar maple. Sugar maple did not display significant physiological plasticity, but showed variation with tree size in both crown morphology and whole-tree biomass allocation. When sugar maple was small, a greater proportion of whole-tree biomass was allocated to roots. However, physiological differences between the species decreased with decreasing light and most morphological and allocational differences tended to disappear with increasing tree size, suggesting that many species differences in shade-tolerance are expressed mainly during the seedling stage. Understory trees of both species survived for 4 years under shade nets, possibly because of higher plasticity when small and the use of stored reserves when taller. Copyright 2004 Heron Publishing

  12. Defects in birch associated with injuries made by Xyloterinus politus Say.

    Science.gov (United States)

    Alex L. Shigo

    1966-01-01

    The purpose of this note is to give a brief pictorial description of the internal defects in paper birch (Betula papyrifera Marsh.) and yellow birch (B. alleghaniensis Britt.) that are associated with external signs of infestation by the ambrosia beetle Xyloterinus politus (fig. 1). The information was gained...

  13. Impact of wind-induced microsites and disturbance severity on tree regeneration patterns: Results from the first post-storm decade

    Science.gov (United States)

    Floor Vodde; Kalev Jogiste; Jeroen Engelhart; Lee E. Frelich; W. Keith Moser; Alan Sims; Marek Metslaid

    2015-01-01

    In two hemiboreal mixed spruce-hardwood forests in north-east Estonia, we studied (1) which factors affect tree regeneration survival and development during the first post-storm decade and (2) how these effects change in time. Regeneration height and mortality of the tree species black alder (Alnus glutinosa (L.) J. Gaertn.), birch (Betula pendula Roth., Betula...

  14. Carbon dynamics in the deciduous broadleaf tree Erman's birch (Betula ermanii) at the subalpine treeline on Changbai Mountain, Northeast China.

    Science.gov (United States)

    Wang, Qing-Wei; Qi, Lin; Zhou, Wangming; Liu, Cheng-Gang; Yu, Dapao; Dai, Limin

    2018-01-01

    The growth limitation hypothesis (GLH) and carbon limitation hypothesis (CLH) are two dominant explanations for treeline formation. The GLH proposes that low temperature drives the treeline through constraining C sinks more than C sources, and it predicts that non-structural carbohydrate (NSC) levels are static or increase with elevation. Although the GLH has received strong support globally for evergreen treelines, there is still no consensus for deciduous treelines, which experience great asynchrony between supply and demand throughout the year. We investigated growth and the growing-season C dynamics in a common deciduous species, Erman's birch (Betula ermanii), along an elevational gradient from the closed forest to the treeline on Changbai Mountain, Northeast China. Samples were collected from developing organs (leaves and twigs) and main storage organs (stems and roots) for NSC analysis. Tree growth decreased with increasing elevation, and NSC concentrations differed significantly among elevations, organs, and sampling times. In particular, NSC levels varied slightly during the growing season in leaves, peaked in the middle of the growing season in twigs and stems, and increased continuously throughout the growing season in roots. NSCs also tended to increase or vary slightly in developing organs but decreased significantly in mature organs with increasing elevation. The decrease in NSCs with elevation in main storage organs indicates support for the CLH, while the increasing or static trends in new developing organs indicate support for the GLH. Our results suggest that the growth limitation theory may be less applicable to deciduous species' growth than to that of evergreen species. © 2018 Botanical Society of America.

  15. Structural analysis of heat-treated birch (Betule papyrifera) surface during artificial weathering

    International Nuclear Information System (INIS)

    Huang Xianai; Kocaefe, Duygu; Kocaefe, Yasar; Boluk, Yaman; Krause, Cornélia

    2013-01-01

    Highlights: ► Investigate detailed structural changes of heat-treated wood due to weathering. ► Identify connection between physical structural changes and chemical degradation. ► Study effect of heat treatment conditions on weathering degradation process. - Abstract: Effect of artificial weathering on the surface structural changes of birch (Betule papyrifera) wood, heat-treated to different temperatures, was studied using the fluorescence microscopy and the scanning electron microscopy (SEM). Changes in the chemical structure of wood components were analyzed by FTIR in order to understand the mechanism of degradation taking place due to heat treatment and artificial weathering. The results are compared with those of the untreated (kiln-dried) birch. The SEM analysis results show that the effect of weathering on the cell wall of the untreated birch surface is more than that of heat-treated samples. The FTIR spectroscopy results indicate that lignin is the most sensitive component of heat-treated birch to the weathering degradation process. Elimination of the amorphous and highly crystallised cellulose is observed for both heat-treated and untreated wood during weathering. It is also observed that heat treatment increases the lignin and crystallised cellulose contents, which to some extent protects heat-treated birch against degradation due to weathering.

  16. Next generation immunotherapy for tree pollen allergies.

    Science.gov (United States)

    Su, Yan; Romeu-Bonilla, Eliezer; Heiland, Teri

    2017-10-03

    Tree pollen induced allergies are one of the major medical and public health burdens in the industrialized world. Allergen-Specific Immunotherapy (AIT) through subcutaneous injection or sublingual delivery is the only approved therapy with curative potential to pollen induced allergies. AIT often is associated with severe side effects and requires long-term treatment. Safer, more effective and convenient allergen specific immunotherapies remain an unmet need. In this review article, we discuss the current progress in applying protein and peptide-based approaches and DNA vaccines to the clinical challenges posed by tree pollen allergies through the lens of preclinical animal models and clinical trials, with an emphasis on the birch and Japanese red cedar pollen induced allergies.

  17. Daily home measurements of exhaled nitric oxide in asthmatic children during natural birch pollen exposure

    DEFF Research Database (Denmark)

    Vahlkvist, Signe; Sinding, Marianne; Skamstrup, Kirsten

    2006-01-01

    the feasibility, repeatability, accuracy, sensitivity, and biologic plausibility of new handheld equipment for FENO measurements. We studied day-to-day home measurements of FENO during the birch pollen season in children with allergy to birch pollen and a history of mild asthma and rhinoconjunctivitis during...... this season, as well as in nonatopic children. METHODS: Eleven children with mild asthma and allergy to birch pollen, performed daily home measurements of FENO for 6 weeks before and during the birch pollen season by using a handheld FENO monitor (NIOX MINO). Additionally, FENO (chemiluminescence equipment...... of FENO to a wider group of asthma clinics and even home measurements....

  18. Alaska birch for edge-glued panel production—considerations for wood products manufacturers

    Science.gov (United States)

    David. Nicholls

    2010-01-01

    Edge-glued panels could become a natural extension for the birch (Betula papyrifera Marsh.) lumber industry in Alaska, resulting in greater utilization of the birch resource while allowing producers to explore a wider variety of products and markets. Key advantages of edge-glued panel production include the relatively low cost of equipment, the...

  19. Responses of human birch pollen allergen-reactive T cells to chemically modified allergens (allergoids).

    Science.gov (United States)

    Dormann, D; Ebner, C; Jarman, E R; Montermann, E; Kraft, D; Reske-Kunz, A B

    1998-11-01

    Allergoids are widely used in specific immunotherapy for the treatment of IgE-mediated allergic diseases. The aim of this study was to analyse whether a modification of birch pollen allergens with formaldehyde affects the availability of T-cell epitopes. Efficient modification of the allergens was verified by determining IgE and IgG binding activity using ELISA inhibition tests. T-cell responses to birch pollen allergoids were analysed in polyclonal systems, using peripheral blood mononuclear cells (PBMC) of five birch pollen-allergic individuals, as well as birch pollen extract-reactive T-cell lines (TCL), established from the peripheral blood of 14 birch pollen-allergic donors. To determine whether the modification of natural (n)Bet v 1 with formaldehyde or maleic anhydride results in epitope-specific changes in T-cell reactivities, 22 Bet v 1-specific T-cell clones (TCC), established from nine additional birch pollen-allergic individuals, were tested for their reactivity with these products. The majority of PBMC and TCL showed a reduced response to the birch pollen extract allergoid. Bet v 1-specific TCC could be divided into allergoid-reactive and -non-reactive TCC. No simple correlation between possible modification sites of formaldehyde in the respective T-cell epitopes and the stimulatory potential of the allergoid was observed. Mechanisms of suppression or of anergy induction were excluded as an explanation for the non-reactivity of representative TCC. All TCC could be stimulated by maleylated and unmodified nBet v 1 to a similar extent. These results demonstrate differences in the availability of T-cell epitopes between allergoids and unmodified allergens, which are most likely due to structural changes within the allergen molecule.

  20. Recombinant Mal d 1 facilitates sublingual challenge tests of birch pollen-allergic patients with apple allergy.

    Science.gov (United States)

    Kinaciyan, T; Nagl, B; Faustmann, S; Kopp, S; Wolkersdorfer, M; Bohle, B

    2016-02-01

    It is still unclear whether allergen-specific immunotherapy (AIT) with birch pollen improves birch pollen-related food allergy. One reason for this may be the lack of standardized tests to assess clinical reactions to birch pollen-related foods, for example apple. We tested the applicability of recombinant (r) Mal d 1, the Bet v 1-homolog in apple, for oral challenge tests. Increasing concentrations of rMal d 1 in 0.9% NaCl were sublingually administered to 72 birch pollen-allergic patients with apple allergy. The dose of 1.6 μg induced oral allergy syndromes in 26.4%, 3.2 μg in 15.3%, 6.3 μg in 27.8%, 12.5 μg in 8.3%, 25 μg in 11.1%, and 50 μg in 4.2% of the patients. No severe reactions occurred. None of the patients reacted to 0.9% NaCl alone. Sublingual administration of 50 μg of rMal d 1 induced no reactions in three nonallergic individuals. Our approach allows straight forward, dose-defined sublingual challenge tests in a high number of birch pollen-allergic patients that inter alia can be applied to evaluate the therapeutic efficacy of birch pollen AIT on birch pollen-related food allergy. © 2015 The Authors. Allergy Published by John Wiley & Sons Ltd.

  1. Uptake and Translocation of Manganese by Native Tree Species in a Constructed Wetland Treating Landfill Leachates

    OpenAIRE

    A. Snow; Abdel E. Ghaly

    2007-01-01

    A surface flow constructed wetland was used to treat stormwater runoff from surrounding watersheds which are comprised primarily of commercial properties and two former landfills. The uptake of manganese by red maple, white birch and red spruce trees growing under flooded soil conditions in the constructed wetland was compared to that of the same trees growing under well drained soil conditions in a nearby reference site. The seasonal variability of manganese and its distribution in different...

  2. Variability of some morphological traits of one-year old red oak, black walnut, birch and wild pear seedlings in the nurseries of Jastrebac region

    Directory of Open Access Journals (Sweden)

    Krstić Milun

    2002-01-01

    Full Text Available Five morphological and quantitative characteristics of one-year old seedlings of Red oak (Quercus rubra L, Black walnut (Juglans nigra L, Wild pear (Pyrus pygrowser Borkh and Birch (Betula verrucosa Ehrh were studied. The seedlings were produced and cultivated in the controlled conditions of the nursery in the region of Jastrebac, by the classical method. Aboveground seedling height, root collar diameter, root length, number of secondary roots and the leaf assimilation area were analysed. Intraspecific and interspecific variability of morphological features of the above species were assessed by the comparative analysis and statistical methods The comparative analysis shows the great individual variability of seedlings, which can indicate their genetic potential, adaptation to environment conditions, further spontaneous selection and the development in natural conditions. This justifies the need of the quality assessment and the first selection already in the nursery, in order to ensure the quality planting material and to reduce the risk of afforestation failure One-year old birch seedlings have the lowest average height (18.8 cm. Black walnut and Wild pear seedlings are approximately twice as high, and Red oak about 2.5 times higher. At the same time Red oak seedlings have for about one-fourth greater height than Black walnut, and for one-third greater height than Wild pear. Wild pear seedlings attain the averagely twice larger root collar diameter than Birch (2.8 cm, Red oak seedlings about 2.5 times larger diameter, and Black walnut 3.5 times larger diameter. Black walnut has a larger root collar diameter than Red oak for about one third, and almost twice larger than Wild pear. Birch, Red oak and Wild pear have almost twice longer root (1.8-1.9 times, Black walnut about 2.25 times longer. The total assimilation area of a Birch seedling is averagely 89.0 cm2. Compared to birch, wild pear has approximately double assimilation area per tree, Red

  3. Algological and Mycological Characterization of Soils under Pine and Birch Forests in the Pasvik Reserve

    Science.gov (United States)

    Korneikova, M. V.; Redkina, V. V.; Shalygina, R. R.

    2018-02-01

    The structure of algological and mycological complexes in Al-Fe-humus podzols (Albic Podzols) under pine and birch forests of the Pasvik Reserve is characterized. The number of micromycetes is higher in more acid soils of the pine forest, while the species diversity is greater under the birch forest. The genus Penicillium includes the largest number of species. The greatest abundance and occurrence frequency are typical for Penicillium spinulosum, P. glabrum, and Trichoderma viride in pine forest and for Umbelopsis isabellina, Mucor sp., Mortierella alpina, P. glabrum, Aspergillus ustus, Trichoderma viride, and T. koningii in birch forest. Cyanobacteria-algal cenoses of the investigated soils are predominated by green algae. Soils under birch forest are distinguished by a greater diversity of algal groups due to the presence of diatoms and xanthophytes. Species of frequent occurrence are represented by Pseudococcomyxa simplex and Parietochloris alveolaris in soils of the pine forest and by Tetracystis cf. aplanospora, Halochlorella rubescens, Pseudococcomyxa simplex, Fottea stichococcoides, Klebsormidium flaccidum, Hantzschia amphioxys, Microcoleus vaginatus, and Aphanocapsa sp. in soils under birch forest

  4. Correlation between the morphogenetic types of litter and their properties in bog birch forests

    Science.gov (United States)

    Efremova, T. T.; Efremov, S. P.; Avrova, A. F.

    2010-08-01

    A formalized arrangement of morphogenetic types of litter according to the physicochemical parameters provided their significant grouping in three genetic associations. The litter group (highly decomposed + moderately decomposed) is confined to the tall-grass group of bog birch forests. The rhizomatous (roughly decomposed) litter is formed in the sedge-reed grass bog birch forests. The litter group (peaty + peatified + peat) is associated with the bog-herbaceous-moss group of forest types. The genetic associations of the litters (a) reliably characterize the edaphic conditions of bog birch forests and (b)correspond to formation of the peat of certain ecological groups. We found highly informative the acid-base parameters, the exchangeable cations (Ca2+ + Mg2+) and the total potential acidity, which differentiated the genetic associations of litter practically with 100% probability. The expediency of studying litters under groups of forest types rather than under separate types of bog birch forests was demonstrated.

  5. Features of secondary birch young stands in low mountain Pokuttya (Ukrainian Carpathian mts.

    Directory of Open Access Journals (Sweden)

    S. Y. Milevskaya

    2015-06-01

    Full Text Available Forest landscapes of the region during the last 3–5 centuries undergone the profound anthropogenic transformation. Secondary young stands occupy 25% of the total forest area. The problem of derivatives is particularly relevant for the modern forest typology in the Carpathian region. It requires the reflection in its dynamic trends shaping the stands, especially mixed young stands. The aim of our study consisted in getting the knowledge of the structural features of the secondary phytocoenosis of birch young stands in this area.The object of the study was age class I saplings growing in the mountainous part of Pokuttya, particularly in the basin of the Lutshka River. The conceptual basis of our study is the modern dynamic vision that every forest type is a consecutive series of forest plant communities within each type of homogeneous growing conditions. We apply methods of ecological-floristic research of the Brown-Blanke school in the interpretation of the Polish school phytosociology. However we also take into account both syntaxonomy generalizations of the Ukrainian scientists. The actual material comprises the original geobotanical studies with fixation of the vast majority of species in plant communities. Mainly the species having diagnostic value to separate syntaxons were taken into account in the analytical processing. Young forest stands (with the height of 8–12 m and crown cover of 70% together form the trees Betula pendula and B. pubescens. Fairly numerous admixture is formed by trees Alnus incana; besides, there are Fagus sylvatica, Populus tremula, Quercus robur, Padus avium. For dominants, they can be called “grey-alder birch blackberry sedge bracken fern” – Betula pendula+Alnus incana–Rubus caesius–Carex brizoides+Pteridium aquilinum. It is rich in floristic composition of the plant communities. They contain at least 12 species of trees, 3 species of shrubs, 4 species of bushes and 89 species of herbs. Diagnostic

  6. Sources of variation in concentrations of nickel and copper in mountain birch foliage near a nickel-copper smelter at Monchegorsk, north-western Russia: results of long-term monitoring

    International Nuclear Information System (INIS)

    Kozlov, Mikhail V.

    2005-01-01

    Concentrations of nickel and copper, two principal metal pollutants of the 'Severonikel' smelter at Monchegorsk, NW Russia, were measured in unwashed leaves of mountain birch, Betula pubescens subsp. czerepanovii, collected in eight study sites along the pollution gradient during 1991-2003. In spite of significant decline in metal emissions, concentrations of foliar metals in most of the study sites did not decrease, indicating that soil contamination remains extremely high. Multiyear mean values peaked at 6.6 km S of the smelter, where they were 20-25 times higher than in the most distant study site. Concentrations of both metals demonstrated pronounced annual variation, which was explained by the meteorological conditions of early summer: higher precipitation in May increased foliar concentrations of both metals, whereas higher precipitation in June resulted in lower foliar concentrations of nickel. These data suggest that ecotoxicological situation in metal-contaminated areas can be modified by the expected climate change. In heavily polluted sites individual birch trees generally retained their ranks in terms of metal contamination during 1995-2003, demonstrating that the use of the same set of trees can significantly increase the accuracy of the monitoring data. - Foliar concentrations of nickel and copper did not reflect emission decline during 1991-2003; annual variation was explained by weather conditions

  7. Study on the Modification of Bleached Eucalyptus Kraft Pulp Using Birch Xylan

    Science.gov (United States)

    Wenjia Han; Chuanshan Zhao; Thomas Elder; Rendang Yang; Dongho Kim; Yunqiao Pu; Jeffery Hsieh; Arthur J. Ragauskas

    2012-01-01

    In this study, birch xylan was deposited onto elementally chlorine free (ECF) bleached eucalyptus kraft pulp, and the corresponding changes in physical properties were determined. An aqueous 5% birch xylan solution at pH 9 was added to 5 wt% slurry of bleached kraft eucalyptus fibers, with stirring at 70 C for 15 min after which the pH was adjusted to 5–6. The xylan...

  8. Lead in some food crops and trees

    Energy Technology Data Exchange (ETDEWEB)

    Warren, H V; Delavault, R E

    1962-02-01

    An investigation has been made of the lead content of trees and some of the more common vegetables and cereals (maize, cabbage, potatoes, carrots, beets, onions, peas, hops, oats, rhubarb, lettuce, cauliflower, leeks, barley, rye, and wheat) grown in British Columbia and in Great Britain. The lead content of the lime, yew, willow, birch, oak, ash, hazel and cypress was determined. It was concluded that in areas where soils have an abnormally high lead content, food products may acquire up to ten times as much lead, or more, than those grown on normal soil.

  9. Acute toxicity of birch tar oil on aquatic organisms

    Directory of Open Access Journals (Sweden)

    M. HAGNER

    2008-12-01

    Full Text Available Birch tar oil (BTO is a by-product of processing birch wood in a pyrolysis system. Accumulating evidence suggests the suitability of BTO as a biocide or repellent in terrestrial environments for the control of weeds, insects, molluscs and rodents. Once applied as biocide, BTO may end up, either through run-off or leaching, in aquatic systems and may have adverse effects on non-target organisms. As very little is known about the toxicity of BTO to aquatic organisms, the present study investigated acute toxicity (LC50/EC50 of BTO for eight aquatic organisms. Bioassays with the Asellus aquaticus (crustacean, Lumbriculus variegatus (oligochaeta worm, Daphnia magna (crustacean, Lymnea sp. (mollusc, Lemna minor (vascular plant, Danio rerio (fish, Scenedesmus gracilis (algae, and Vibrio fischeri (bacterium were performed according to ISO, OECD or USEPA-guidelines. The results indicated that BTO was practically nontoxic to most aquatic organisms as the median effective BTO concentrations against most organisms were >150 mg L-1. In conclusion, our toxicity tests showed that aquatic organisms are to some extent, invariably sensitive to birch tar oil, but suggest that BTO does not pose a severe hazard to aquatic biota. We deduce that, unless BTOs are not applied in the immediate vicinity of water bodies, no special precaution is required.;

  10. Cadmium accumulation and its effect on the in vitro growth of woody fleabane and mycorrhized white birch

    Energy Technology Data Exchange (ETDEWEB)

    Fernandez, R.; Bertrand, A.; Casares, A. [Departamento de Biologia de Organismos y Sistemas, Oviedo University, Catedratico Rodrigo Uria s/n, 33071 Oviedo (Spain); Garcia, R. [Departamento de Quimica Fisica y Analitica, Oviedo University, Julian Claveria s/n, 33071 Oviedo (Spain); Gonzalez, A. [Departamento de Biologia de Organismos y Sistemas, Oviedo University, Catedratico Rodrigo Uria s/n, 33071 Oviedo (Spain)], E-mail: aidag@uniovi.es; Tames, R.S. [Departamento de Biologia de Organismos y Sistemas, Oviedo University, Catedratico Rodrigo Uria s/n, 33071 Oviedo (Spain)

    2008-04-15

    The effect of Cd on woody fleabane (Dittrichia viscosa (L.) Greuter) and white birch (Betula celtiberica Rothm. and Vasc.) was examined. Woody fleabane and white birch were grown in vitro in Murashige, T., Skoog, F., [1962. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant. 15, 473-479] (MS) plus Cd (10 mg Cd kg{sup -1}) and except for root length in white birch, plant development was inhibited when Cd was added. Cd accumulation in above-ground tissues showed differences among clones, reaching 1300 and 463 mg Cd kg{sup -1} dry wt. in selected clones of woody fleabane and white birch, respectively. Tolerance of Paxillus filamentosus (Scop) Fr. to Cd was also examined before mycorrhization. Plants of mycorrhized white birch grown in the presence of Cd had a better development and accumulated more Cd in their shoots than the non-mycorrhized ones. The use of selected clones of woody fleabane and the mycorrhization of white birch enhance extraction efficiency from contaminated soils in phytoremediation programs. - The high accumulation of Cd observed in selected clones of Dittrichia viscosa and mycorrhized Betula celtiberica grown in vitro implies a potential application for phytoextraction.

  11. Experimental Study of Impregnation Birch and Aspen Samples

    Directory of Open Access Journals (Sweden)

    Igor Vladislavovich Grigorev

    2014-10-01

    Full Text Available An experimental study of wood impregnation was implemented by applying centrifugal methods. The impregnants were a 10% aqueous solution of potassium chloride and a 2% aqueous solution of borax. Birch (Betula pendula and aspen (Populus tremula wood samples in different moisture content were tested. The impregnation time in the centrifugal device were 30 seconds repeated 21 times, and the samples were measured after every 30 seconds. The experimental results were fitted to a nonlinear filtration law, which indicated that the centrifugal wood impregnation was dependent on wood species, wood moisture, rotational speed, and radius. Determination of rotational speed and centrifuge radius for impregnating aspen and birch at varying lengths and humidity under conditions of the nonlinear impregnant filtration law can be done using the example charts that were developed and presented in this study.

  12. The First Record of the Peregrine Falcon Nesting on a Tree, Russia

    Directory of Open Access Journals (Sweden)

    Oleg V. Andreenkov

    2018-03-01

    Full Text Available On April 29, 2017, in the east of the Novosibirsk region, a Peregrine Falcon (Falco peregrinus nest was found on a birch in the old nest of a Black Kite (Milvus migrans. The nesting tree is located under a steep offshore slope on the right bank of the river Inya, so that the nest is well within view from the shore. There were 5 eggs in the clutch.

  13. Networked web-cameras monitor congruent seasonal development of birches with phenological field observations

    Science.gov (United States)

    Peltoniemi, Mikko; Aurela, Mika; Böttcher, Kristin; Kolari, Pasi; Loehr, John; Karhu, Jouni; Kubin, Eero; Linkosalmi, Maiju; Melih Tanis, Cemal; Nadir Arslan, Ali

    2017-04-01

    Ecosystems' potential to provide services, e.g. to sequester carbon is largely driven by the phenological cycle of vegetation. Timing of phenological events is required for understanding and predicting the influence of climate change on ecosystems and to support various analyses of ecosystem functioning. We established a network of cameras for automated monitoring of phenological activity of vegetation in boreal ecosystems of Finland. Cameras were mounted on 14 sites, each site having 1-3 cameras. In this study, we used cameras at 11 of these sites to investigate how well networked cameras detect phenological development of birches (Betula spp.) along the latitudinal gradient. Birches are interesting focal species for the analyses as they are common throughout Finland. In our cameras they often appear in smaller quantities within dominant species in the images. Here, we tested whether small scattered birch image elements allow reliable extraction of color indices and changes therein. We compared automatically derived phenological dates from these birch image elements to visually determined dates from the same image time series, and to independent observations recorded in the phenological monitoring network from the same region. Automatically extracted season start dates based on the change of green color fraction in the spring corresponded well with the visually interpreted start of season, and field observed budburst dates. During the declining season, red color fraction turned out to be superior over green color based indices in predicting leaf yellowing and fall. The latitudinal gradients derived using automated phenological date extraction corresponded well with gradients based on phenological field observations from the same region. We conclude that already small and scattered birch image elements allow reliable extraction of key phenological dates for birch species. Devising cameras for species specific analyses of phenological timing will be useful for

  14. Delivery Systems for Birch-Bark Triterpenoids and Their Derivatives in Anticancer Research.

    Science.gov (United States)

    Mierina, Inese; Vilskersts, Reinis; Turks, Maris

    2018-05-29

    Birch-bark triterpenoids and their semi-synthetic derivatives possess a wide range of biological activities including cytotoxic effects on various tumour cell lines. However, due to the low solubility and bioavailability, their medicinal applications are rather limited. The use of various nanotechnology-based drug delivery systems is rapidly developing approach to the solubilisation of insufficiently bioavailable pharmaceuticals. Herein, the drug delivery systems deemed to be applicable for birch-bark triterpenoid structures are reviewed. The aforementioned disadvantages of birch-bark triterpenoids and their semi-synthetic derivatives can be overcome through their incorporation into organic nanoparticles, which include various dendrimeric systems, as well as embedding the active compounds into polymer matrices or complexation with carbohydrate nanoparticles without covalent bonding. Some of the known triterpenoid delivery systems consist of nanoparticles featuring inorganic cores covered with carbohydrates or other polymers. Methods for delivering the title compounds through encapsulation and emulsification into lipophilic media are also suitable. Besides, the birch-bark triterpenoids can form self-assembling systems with increased bio-availability. Even more, the self-assembling systems are used as carriers for delivering other chemotherapeutic agents. Another advantage besides increased bioavailability and anticancer activity is the reduced overall systemic toxicity in most of the cases, when triterpenoids are delivered with any of the carriers. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  15. Botanicals With Dermatologic Properties Derived From First Nations Healing: Part 1-Trees.

    Science.gov (United States)

    Colantonio, Sophia; Rivers, Jason K

    First Nations people have a long history of working with medicinal plants used to treat skin diseases. The purpose was to assess the dermatologic therapeutic potential of western red cedar, white spruce, birch, balsam poplar, and black spruce. Based on expert recommendations, 5 trees were selected that were used in First Nations medicine for cutaneous healing and have potential and/or current application to dermatology today. We searched several databases up to June 12, 2014. Western red cedar's known active principal compound, β-thujaplicin, has been studied in atopic dermatitis. White spruce's known active principal compound, 7-hydroxymatairesinol, has anti-inflammatory activity, while phase II clinical trials have been completed on a birch bark emulsion for the treatment of actinic keratoses, epidermolysis bullosa, and the healing of split thickness graft donor sites. Balsam poplar has been used clinically as an anti-aging remedy. Black spruce bark contains higher amounts of the anti-oxidant trans-resveratrol than red wine. North American traditional medicine has identified important botanical agents that are potentially relevant to both cosmetic and medical dermatology. This study is limited by the lack of good quality evidence contributing to the review. The article is limited to 5 trees, a fraction of those used by First Nations with dermatological properties.

  16. Impact of urbanization of the proteome of birch pollen and its chemotactic activity on human granulocytes

    NARCIS (Netherlands)

    Bryce, M.; Drews, O.; Schenk, M.F.; Menzel, A.; Estrella, N.; Weichenmeier, I.; Smulders, M.J.M.; Buters, J.; Ring, J.; Gorg, A.; Behrendt, H.; Traidl-Hoffmann, C.

    2010-01-01

    Background: Epidemiologic studies reveal a dramatic increase in allergies in the last decades. Air pollution is considered to be one of the factors responsible for this augmentation. The aim of this study was to analyze the impact of urbanization on birch pollen. The birch pollen proteome was

  17. An entomopathogenic fungus and nematode prove ineffective for biocontrol of an invasive leaf miner Profenusa thomsoni in Alaska

    Science.gov (United States)

    Robert Progar; J.J. Kruse; John Lundquist; K.P. Zogas; M.J. Rinella

    2015-01-01

    A non-native invasive sawfly, the amber-marked birch leaf miner Profenusa thomsoni (Konow), was first detected in south-central Alaska in 1996 and is now widely distributed throughout urban and wild birch trees in Alaska. Impacts have been considered primarily aesthetic because leaf miners cause leaves of birch trees (Betula...

  18. Medicinal properties of fungi occurring on Betula sp. trees. A review

    OpenAIRE

    Smolibowska Joanna; Szymański Marcin; Szymański Arkadiusz

    2016-01-01

    The article presents the chemical costituents and pharmacological properties of polyporoid fungi found on birch, namely Piptoporus betulinus, Inonotus obliquus, Lenzites betulina, Fomes fomentarius, and Trametes versicolor. The in vitro and in vivo studies on the effect of different extracts from above-mentioned fungi on the human organism shown anti-cancer, anti-inflammatory, antiviral, antibacterial and immunostimulant activity, conditioned by the presence of such compounds as polysaccharid...

  19. An investigation of the possible immunological relationship between allergen extracts from birch pollen, hazelnut, potato and apple

    DEFF Research Database (Denmark)

    Andersen, Klaus Ejner; Løwenstein, H

    1978-01-01

    identity between birch pollen and hazelnut. By the same method no partial immunological identity between birch pollen and extracts and fresh peel from apples and potatoes was found. However, both apples and potatoes gave rise to non-immunological affinity precipitates. On this basis it is discussed...

  20. MeshTree: A Delay optimised Overlay Multicast Tree Building Protocol

    OpenAIRE

    Tan, Su-Wei; Waters, A. Gill; Crawford, John

    2005-01-01

    We study decentralised low delay degree-constrained overlay multicast tree construction for single source real-time applications. This optimisation problem is NP-hard even if computed centrally. We identify two problems in traditional distributed solutions, namely the greedy problem and delay-cost trade-off. By offering solutions to these problems, we propose a new self-organising distributed tree building protocol called MeshTree. The main idea is to embed the delivery tree in a degree-bound...

  1. Evaluation of 137Cs and 40K distribution in soil under tree crown

    International Nuclear Information System (INIS)

    Narmontas, A.; Butkus, D.

    2003-01-01

    In this work is analysed vertical and horizontal distribution of 137 Cs and 40 K in a soil under tree crown. 137 Cs and 40 K have different nature, 137 Cs is artificial radionuclide and 40 K is natural radionuclide, so they have different migration properties. The big influence to the environment was done by accident in Chernobyl nuclear power plant in 1986. Besides that, environment was polluted by radioactive elements in a time of nuclear weapon experiments. After the accident in Chernobyl nuclear power plant in different components of forest soil 137 Cs was distributed variously. In vertical disposition 137 Cs migration is depended from diffusion, convection and by migration in the tree roots. The vertical and horizontal distribution of radionuclides in birch and pine habitat soil is estimated. Also it is determined what influence is doing tree habitat environment, tree crown, dominated winds for the distribution of radionuclides in soil. Also it is discussed about soil sampling and measuring methods. (author)

  2. Water relations in silver birch during springtime: How is sap pressurised?

    Science.gov (United States)

    Hölttä, T; Dominguez Carrasco, M D R; Salmon, Y; Aalto, J; Vanhatalo, A; Bäck, J; Lintunen, A

    2018-05-06

    Positive sap pressures are produced in the xylem of birch trees in boreal conditions during the time between the thawing of the soil and bud break. During this period, xylem embolisms accumulated during wintertime are refilled with water. The mechanism for xylem sap pressurization and its environmental drivers are not well known. We measured xylem sap flow, xylem sap pressure, xylem sap osmotic concentration, xylem and whole stem diameter changes, and stem and root non-structural carbohydrate concentrations, along with meteorological conditions at two sites in Finland during and after the sap pressurisation period. The diurnal dynamics of xylem sap pressure and sap flow during the sap pressurisation period varied, but were more often opposite to the diurnal pattern after bud burst, i.e. sap pressure increased and sap flow rate mostly decreased when temperature increased. Net conversion of soluble sugars to starch in the stem and roots occurred during the sap pressurisation period. Xylem sap osmotic pressure was small in comparison to total sap pressure, and it did not follow changes in environmental conditions or tree water relations. Based on these findings, we suggest that xylem sap pressurisation and embolism refilling occur gradually over a few weeks through water transfer from parenchyma cells to xylem vessels during daytime, and then the parenchyma are refilled mostly during nighttime by water uptake from soil. Possible drivers for water transfer from parenchyma cells to vessels are discussed. Also the functioning of thermal dissipation probes in conditions of changing stem water content is discussed. © 2018 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.

  3. Foliar responses of understorey Abies lasiocarpa to different degrees of release cutting of Betula papyrifera and conifer mixed species stand

    Energy Technology Data Exchange (ETDEWEB)

    Wang, J.R.; Letchford, T. [Ministry of Forests, Prince George, BC (Canada). Red Rock Research Station; Comeau, P.G. [BC Ministry of Forests, Victoria, BC (Canada); Coopersmith, D. [BC Ministry of Forests, Prince George, BC (Canada)

    2000-07-01

    Foliar responses of subalpine fir (Abies lasiocarpa (Hook.) Nutt.) to thinning were studied in a 35-yr-old mixed stand of paper birch (Betula papyrifera Marsh.) and conifers. The stand regenerated naturally after a wildfire with a canopy dominated by paper birch (average height 9.8 m) and an understorey dominated by subalpine fir (average height 1.6 m). The stand was thinned to four densities of birch: 0, 600 and 1200 stems ha{sup -1} and control (Unthinned at 2300-6400 stems ha{sup -1}) in the autumn of 1995. The understorey conifers, mainly subalpine fir, were thinned to 1200 stems ha{sup -1}. The study used a completely randomized split-plot design. Three sample trees were systematically selected from each treatment replicate and each tree stratum (upper, intermediate and lower understorey). One-year-old and older age class needles were collected from one south-facing branch within the fifth whorl from the tree top. Thinning of paper birch significantly (p<0.001) increased leaf area and dry weight per 100 needles for intermediate and short trees except in the 0 birch treatment. Understorey subalpine fir trees in 600 stems ha{sup -1} birch (T3) had the largest leaf area and leaf dry weight per 100 1-yr-old needles. Specific leaf area (SLA) decreased from unthinned (T1) to 0 birch (T4). Lower understorey trees had the largest SLA. One-year-old needles had significantly higher N, P and K concentrations in all the thinning treatments. These responses are consistent with the shade tolerance of subalpine fir. The results suggest that when managing a paper birch-conifers mixed wood forest it may be of benefit to understorey conifers to leave a birch canopy as a nursing crop.

  4. Upland Trees Contribute to Exchange of Nitrous Oxide (N2O) in Forest Ecosystems

    Science.gov (United States)

    Tian, H.; Thompson, R.; Canadell, J.; Winiwarter, W.; Machacova, K.; Maier, M.; Halmeenmäki, E.; Svobodova, K.; Lang, F.; Pihlatie, M.; Urban, O.

    2017-12-01

    The increase in atmospheric nitrous oxide (N2O) concentration contributes to the acceleration of the greenhouse effect. However, the role of trees in the N2O exchange of forest ecosystems is still an open question. While the soils of temperate and boreal forests were shown to be a natural source of N2O, trees have been so far overlooked in the forest N2O inventories. We determined N2O fluxes in common tree species of boreal and temperate forests: Scots pine (Pinus sylvestris), Norway spruce (Picea abies), downy and silver birch (Betula pubescens, B. pendula), and European beech (Fagus sylvatica). We investigated (1) whether these tree species exchange N2O with the atmosphere under natural field conditions, (2) how the tree N2O fluxes contribute to the forest N2O balance, and (3) whether these fluxes show seasonal dynamics. The studies were performed in a boreal forest (SMEAR II station, Finland; June 2014 - May 2015) and two temperate mountain forests (White Carpathians, Czech Republic; Black Forest, Germany; June and July 2015). Fluxes of N2O in mature tree stems and forest floor were measured using static chamber systems followed by chromatographic and photo-acoustic analyses of N2O concentration changes. Pine, spruce and birch trees were identified as net annual N2O sources. Spruce was found the strongest emitter (0.27 mg ha-1 h-1) amounting thus up to 2.5% of forest floor N2O emissions. All tree species showed a substantial seasonality in stem N2O flux that was related to their physiological activity and climatic variables. In contrast, stems of beech trees growing at soils consuming N2O may act as a substantial sink of N2O from the atmosphere. Consistent N2O consumption by tree stems ranging between -12.1 and -35.2 mg ha-1 h-1 and contributing by up to 3.4% to the forest floor N2O uptake is a novel finding in contrast to current studies presenting trees as N2O emitters. To understand these fluxes, N2O exchange of photoautotrophic organisms associated with

  5. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Cerbera manghasL. (SEA MANGO) of Apocynaceae is a medium-sized evergreen coastal tree with milky latex. The bark is grey-brown, thick and ... Fruit is large. (5–10 cm long), oval containing two flattened seeds and resembles a mango, hence the name Mangas or. Manghas. Leaves and fruits contain ...

  6. MixtureTree annotator: a program for automatic colorization and visual annotation of MixtureTree.

    Directory of Open Access Journals (Sweden)

    Shu-Chuan Chen

    Full Text Available The MixtureTree Annotator, written in JAVA, allows the user to automatically color any phylogenetic tree in Newick format generated from any phylogeny reconstruction program and output the Nexus file. By providing the ability to automatically color the tree by sequence name, the MixtureTree Annotator provides a unique advantage over any other programs which perform a similar function. In addition, the MixtureTree Annotator is the only package that can efficiently annotate the output produced by MixtureTree with mutation information and coalescent time information. In order to visualize the resulting output file, a modified version of FigTree is used. Certain popular methods, which lack good built-in visualization tools, for example, MEGA, Mesquite, PHY-FI, TreeView, treeGraph and Geneious, may give results with human errors due to either manually adding colors to each node or with other limitations, for example only using color based on a number, such as branch length, or by taxonomy. In addition to allowing the user to automatically color any given Newick tree by sequence name, the MixtureTree Annotator is the only method that allows the user to automatically annotate the resulting tree created by the MixtureTree program. The MixtureTree Annotator is fast and easy-to-use, while still allowing the user full control over the coloring and annotating process.

  7. Mimotopes for Api g 5, a Relevant Cross-reactive Allergen, in the Celery-Mugwort-Birch-Spice Syndrome.

    Science.gov (United States)

    Lukschal, Anna; Wallmann, Julia; Bublin, Merima; Hofstetter, Gerlinde; Mothes-Luksch, Nadine; Breiteneder, Heimo; Pali-Schöll, Isabella; Jensen-Jarolim, Erika

    2016-03-01

    In the celery-mugwort-birch-spice syndrome, a significant proportion of IgE is directed against high molecular weight (HMW) glycoproteins, including the celery allergen Api g 5. BIP3, a monoclonal antibody originally raised against birch pollen, recognizes HMW allergens in birch and mugwort pollens, celery, and Apiaceae spices. Our aim was to generate mimotopes using BIP3 for immunization against the HMW allergens relevant in the celery-mugwort-birch-spice cross reactivity syndrome. Mimotopes were selected from a random-peptide display library by BIP3 and applied in IgE inhibition assays. The 3 phage clones with the highest inhibitory capacity were chosen for immunization of BALB/c mice. Mouse immune sera were tested for IgG binding to blotted birch pollen extract and used for inhibiting patients' IgE binding. Furthermore, sera were tested for binding to Api g 5, to horseradish peroxidase (HRP) as a second glycoprotein, or to non-glycosylated control allergen Phl p 5 in ELISA, and the specific Api g 5-specific IgG titers were determined. Three rounds of biopanning resulted in phage clones exhibiting 7 different sequences including 1 dominant, 1-6-cyclo-CHKLRCDKAIA. Three phage clones had the capacity to inhibit human IgE binding and induced IgG to the HMW antigen when used for immunizing BALB/c mice. The induced BIP3-mimotope IgG reached titers of 1:500 specifically to Api g 5, but hardly reacted to glycoprotein HRP, revealing a minor role of carbohydrates in their epitope. The mimotopes characterized in this study mimic the epitope of BIP3 relevant for Api g 5, one of the cross-reactive HMW allergens relevant in the celery-mugwort-birch-spice syndrome. BIP3 mimotopes may be used in the future for hyposensitization in this clinical syndrome by virtue of good and specific immunogenicity.

  8. The safety and efficacy of subcutaneous birch pollen immunotherapy - a one-year, randomised, double-blind, placebo-controlled study

    DEFF Research Database (Denmark)

    Bødtger, Uffe; Poulsen, L K; Jacobi, H H

    2002-01-01

    BACKGROUND: There is only very limited documentation of the efficacy and safety of high-dose subcutaneous birch pollen immunotherapy (IT) in double-blind, placebo-controlled (DBPC) studies. Birch pollen is a major cause of allergic morbidity in northern Europe and in eastern parts of North Americ...

  9. Grass pollen symptoms interfere with the recollection of birch pollen symptoms - a prospective study of suspected, asymptomatic skin sensitization

    DEFF Research Database (Denmark)

    Assing, K; Bødtger, Uffe; Poulsen, L K

    2007-01-01

    of seasonal allergic symptoms and prospective seasonal symptom registration among subjects with AS. METHODS: On the basis of a population survey, autumn 2002, including skin prick tests (positive if > or =3 mm) and a screening questionnaire, 87 subjects with AS to birch and/or grass pollen, birch and/or grass...... days. RESULTS: Eleven AS subjects (birch: n = 10) subsequently developed allergic symptoms, yet nine admitted, at follow up, to have had symptoms before inclusion, or even denied pollen-related symptoms despite a significant diary. Compared with AS subjects sensitized to grass pollen, AS subjects...

  10. A COMPARITIVE STUDY USING GEOMETRIC AND VERTICAL PROFILE FEATURES DERIVED FROM AIRBORNE LIDAR FOR CLASSIFYING TREE GENERA

    Directory of Open Access Journals (Sweden)

    C. Ko

    2012-07-01

    Full Text Available We present a comparative study between two different approaches for tree genera classification using descriptors derived from tree geometry and those derived from the vertical profile analysis of LiDAR point data. The different methods provide two perspectives for processing LiDAR point clouds for tree genera identification. The geometric perspective analyzes individual tree crowns in relation to valuable information related to characteristics of clusters and line segments derived within crowns and overall tree shapes to highlight the spatial distribution of LiDAR points within the crown. Conversely, analyzing vertical profiles retrieves information about the point distributions with respect to height percentiles; this perspective emphasizes of the importance that point distributions at specific heights express, accommodating for the decreased point density with respect to depth of canopy penetration by LiDAR pulses. The targeted species include white birch, maple, oak, poplar, white pine and jack pine at a study site northeast of Sault Ste. Marie, Ontario, Canada.

  11. Sugar maple and yellow birch seedling growth after simulated browsing.

    Science.gov (United States)

    Frederick T. Metzger

    1977-01-01

    Simulating natural damage to leaders of forest-grown seedlings of yellow birch and sugar maple resulted in no loss of vigor but a loss in net height growth. Leader elongation depended upon seedling, shoot, and bud characteristics rather than on the extent of damage.

  12. Paper birch (Wiigwaas) of the Lake States, 1980-2010

    Science.gov (United States)

    W. Keith Moser; Mark H. Hansen; Dale Gormanson; Jonathan Gilbert; Alexandra Wrobel; Marla R. Emery; Michael J. Dockry

    2015-01-01

    Data on paper birch (Betula papyrifera L.; wiigwaas in the Ojibwe language), collected by the Forest Inventory and Analysis (FIA) program of the U.S. Forest Service on forested lands in the Great Lakes region (Michigan, Minnesota, and Wisconsin) from 1980 through 2010, are reported. Also presented are results and analysis of a supplemental inventory...

  13. Trace Element Concentrations in Tree Leaves and Lichen Collected Along a Metal Pollution Gradient Near Olkusz (Southern Poland).

    Science.gov (United States)

    Zakrzewska, Marta; Klimek, Beata

    2018-02-01

    The aim of the study was to assess the metal pollution in the vicinity of the Bukowno smelter near Olkusz in southern Poland. Birch and oak leaves, pine needles and a lichen Hypogymnia physodes, overgrowing pine bark were collected at stands at different distances from the smelter and analysed for cadmium (Cd), copper (Cu), lead (Pb) and zinc (Zn) content. Concentrations of metals in the lichen were usually higher than in the tree leaves/needles and decreased with distance from the smelter, apart from the Cu content. The strongest correlation was noticed between Cd and Pb concentrations, which indicates a common pollution source (the smelter). Our results show that birch leaves can be potentially useful as a bioindicator of Zn air pollution since this species was shown to accumulate high amounts of zinc, related to environmental pollution with that metal, in their leaves.

  14. Influence of Biomass Pretreatment Process Time on Furfural Extraction from Birch Wood

    Science.gov (United States)

    Brazdausks, Prans; Puke, Maris; Vedernikovs, Nikolajs; Kruma, Irena

    2013-12-01

    Furfural is a biomass derived-chemical that can be used to replace petrochemicals. In this study, dilute sulphuric acid hydrolysis was used for hemicelluloses secession from birch wood. The reaction was investigated at different biomass treatment times (10-90 min, increasing it by 10 min). We found that the greatest amount of furfural 1.4-2.6%, which is 9.7-17.7% from theoretical possible yield, was formed in the first 30 min of the beginning of birch wood pentoses monosaccharide dehydration, but the greatest yield of furfural 10.3%, which is 70.0% from the theoretical yield, can be obtained after 90 min. Given that furfural yield generally does not exceed 50% from the theoretical amount, the result can be considered as very good.

  15. Uptake and Translocation of Iron by Native Tree Species In A Constructed Wetland Treating Landfill Leachates

    OpenAIRE

    A. Snow; Abdel E. Ghaly; R. Cote; A. M. Snow

    2008-01-01

    A surface flow wetland was constructed in the Burnside Industrial Park, Dartmouth, Nova Scotia, to treat stormwater runoff from the surrounding watersheds which are comprised primarily of commercial properties and two former landfills. The objectives of this study were: (a) to compare the uptake of iron by red maple, white birch and red spruce trees growing under flooded soil conditions in the constructed wetland and well drained soil conditions in a nearby reference site, (b) to evaluate the...

  16. Cooking birch pollen-related food: divergent consequences for IgE- and T cell-mediated reactivity in vitro and in vivo

    NARCIS (Netherlands)

    Bohle, Barbara; Zwölfer, Bettina; Heratizadeh, Annice; Jahn-Schmid, Beatrice; Antonia, Yuliya Dall; Alter, Mareike; Keller, Walter; Zuidmeer, Laurian; van Ree, Ronald; Werfel, Thomas; Ebner, Christof

    2006-01-01

    BACKGROUND: The major birch pollen allergen Bet v 1 cross-reacts with homologous food allergens, resulting in IgE-mediated oral allergy syndromes (OASs). To avoid this food, allergy allergologists and guidebooks advise patients to consume birch pollen-related foods after heating. OBJECTIVE: We

  17. Regional Models of Diameter as a Function of Individual Tree Attributes, Climate and Site Characteristics for Six Major Tree Species in Alberta, Canada

    Directory of Open Access Journals (Sweden)

    Dan A. MacIsaac

    2011-09-01

    Full Text Available We investigated the relationship of stem diameter to tree, site and stand characteristics for six major tree species (trembling aspen, white birch, balsam fir, lodgepole pine, black spruce, and white spruce in Alberta (Canada with data from Alberta Sustainable Resource Development Permanent Sample Plots. Using non-linear mixed effects modeling techniques, we developed models to estimate diameter at breast height using height, crown and stand attributes. Mixed effects models (with plot as subject using height, crown area, and basal area of the larger trees explained on average 95% of the variation in diameter at breast height across the six species with a root mean square error of 2.0 cm (13.4% of mean diameter. Fixed effects models (without plot as subject including the Natural Sub-Region (NSR information explained on average 90% of the variation in diameter at breast height across the six species with a root mean square error equal to 2.8 cm (17.9% of mean diameter. Selected climate variables provided similar results to models with NSR information. The inclusion of nutrient regime and moisture regime did not significantly improve the predictive ability of these models.

  18. Fort Devens Feasibility Study for Group 1A Sites. Final Feasibility Study Shepley’s Hill Landfill Operable Unit Data Item A009

    Science.gov (United States)

    1995-02-01

    WELL LOCATIONS MONITORING PARAMETERS SHL-3 Volatile Organic Compounds SHL-4 USEPA Method 624 plus acetone, 2-butanone, 2- methyl pentanone, and xylenes...pines ( Pinus strobus) in addition to red maple (Acer rubrum). The understory in this area contains american hazelnut, cinnamon fern, and3 clubmoss...NAME STATUS* Trees URed Maple Acer rubrum FAC Gray Birch Betula populifolia FAG Green Ash Fraxinus pennsylvanica FACW` Red Pine Pinus resinosa FACU White

  19. Explaining the dependence of climatic response of tree radial growth on permafrost

    Science.gov (United States)

    Bryukhanova, Marina; Benkova, Anna; von Arx, Georg; Fonti, Patrick; Simanko, Valentina; Kirdyanov, Alexander; Shashkin, Alexander

    2015-04-01

    In northern regions of Siberia it is infrequent to have long-term observations of the variability of soil features, phenological data, duration of the growing season, which can be used to infer the influence of the environment on tree growth and productivity. The best way to understand tree-growth and tree responses to environmental changes is to make use of mechanistic models, allowing to combine already available experiment/field data with other parameters based on biological principles of tree growth. The goal of our study is to estimate which tree species (deciduous, conifer deciduous or conifer evergreen) is more plastic under possible climate changes in permafrost zone. The studied object is located in the northern part of central Siberia, Russia (64°N, 100°E). The study plot was selected within a post-fire succession and representatives for 100 years old even aged mixed forest of Larix gmelinii (Rupr.) Rupr. and Betula pubescens Ehrh. with few exemplars of Spruce (Picea obovata Ledeb.). To understand physiological response of larch, birch and spruce trees to climatic changes the ecological-physiological process-based model of tree photosynthesis (Benkova and Shashkin 2003) was applied. Multiparametric tree-ring chronologies were analyzed and correlated with climatic parameters over the last 77 years. This work is supported by the Ministry of Education and Science of the Russian Federation (Grant from the President of RF for Young Scientists MK-1589.2014.4).

  20. Soil metal concentrations and productivity of Betula populifolia (gray birch) as measured by field spectrometry and incremental annual growth in an abandoned urban Brownfield in New Jersey

    Energy Technology Data Exchange (ETDEWEB)

    Gallagher, Frank J. [Urban Forestry Program, Department of Ecology, Evolution and Natural Resources, Rutgers, State University, 14 College Farm Road, New Brunswick, NJ 08901-8551 (United States); Pechmann, Ildiko [Department of Biological Sciences, Rutgers, State University, 113 University Avenue, Newark, NJ 07102 (United States)], E-mail: pildiko@andromeda.rutgers.edu; Bogden, John D. [Department of Preventive Medicine and Community Health, University of Medicine and Dentistry of New Jersey - N. J. Medical School, P.O. Box 1709, Newark, NJ 07101-1709 (United States); Grabosky, Jason [Urban Forestry Program, Department of Ecology, Evolution and Natural Resources, Rutgers, State University, 14 College Farm Road, New Brunswick, NJ 08901-8551 (United States); Weis, Peddrick [Department of Radiology, University of Medicine and Dentistry of New Jersey - N. J. Medical School, P.O. Box 1709, Newark, NJ 07101-1709 (United States)

    2008-12-15

    A forested brownfield within Liberty State Park, Jersey City, New Jersey, USA, has soils with arsenic, chromium, lead, zinc and vanadium at concentrations above those considered ambient for the area. Using both satellite imagery and field spectral measurements, this study examines plant productivity at the assemblage and individual specimen level. Longer term growth trends (basal area increase in tree cores) were also studied. Leaf chlorophyll content within the hardwood assemblage showed a threshold model for metal tolerance, decreasing significantly beyond a soil total metal load (TML) of 3.0. Biomass production (calculated with RG - Red/Green Ratio Index) in Betula populifolia (gray birch), the co-dominant tree species, had an inverse relationship with the Zn concentration in leaf tissue during the growing season. Growth of B. populifolia exhibited a significant relationship with TML. Assemblage level NDVI and individual tree NDVI also had significant decreases with increasing TML. Ecosystem function measured as plant production is impaired at a critical soil metal load. - Ecosystem function as measured by plant production is impaired at a critical soil metal load (TML above 3) in northern hardwood assemblages growing in a metal-contaminated brownfield.

  1. Soil metal concentrations and productivity of Betula populifolia (gray birch) as measured by field spectrometry and incremental annual growth in an abandoned urban Brownfield in New Jersey

    International Nuclear Information System (INIS)

    Gallagher, Frank J.; Pechmann, Ildiko; Bogden, John D.; Grabosky, Jason; Weis, Peddrick

    2008-01-01

    A forested brownfield within Liberty State Park, Jersey City, New Jersey, USA, has soils with arsenic, chromium, lead, zinc and vanadium at concentrations above those considered ambient for the area. Using both satellite imagery and field spectral measurements, this study examines plant productivity at the assemblage and individual specimen level. Longer term growth trends (basal area increase in tree cores) were also studied. Leaf chlorophyll content within the hardwood assemblage showed a threshold model for metal tolerance, decreasing significantly beyond a soil total metal load (TML) of 3.0. Biomass production (calculated with RG - Red/Green Ratio Index) in Betula populifolia (gray birch), the co-dominant tree species, had an inverse relationship with the Zn concentration in leaf tissue during the growing season. Growth of B. populifolia exhibited a significant relationship with TML. Assemblage level NDVI and individual tree NDVI also had significant decreases with increasing TML. Ecosystem function measured as plant production is impaired at a critical soil metal load. - Ecosystem function as measured by plant production is impaired at a critical soil metal load (TML above 3) in northern hardwood assemblages growing in a metal-contaminated brownfield

  2. Determining the age of CO2 Released From Mountain Birch Forest and Heath in Arctic Sweden

    Science.gov (United States)

    Hartley, I. P.; Garnett, M. H.; Hopkins, D. W.; Sommerkorn, M.; Wookey, P. A.

    2008-12-01

    years old in July, before declining to 3 years old in September. In contrast to the heath, differences between the CT and control plots were lowest mid season despite plant activity peaking during this time. In conclusion, the age of respired C was mainly less than 10 years old suggesting that respiration and photosynthesis are tightly coupled in these ecosystems. On average, the heath released slightly older CO2 than the birch forest so global warming may have more potential to induce C losses from this ecosystem, especially as seasonal patterns demonstrated that the decomposition of older soil C in the heath increased at higher temperatures. In the forest, high birch activity appeared to stimulate the decomposition of older C (priming). This may explain why organic C stocks are lower in the forests than heaths, and tree encroachment into the heaths could result in an overall loss of soil C.

  3. Growth Response of Seedling Yellow Birch to Humus-Soil Mixtures

    Science.gov (United States)

    Carl H. Tubbs; Robert R. Oberg

    1966-01-01

    Previous observations of the establishment of yellow birch have cited the importance of mixed humus-mineral soil seedbeds. Godman and Krefting pointed out that both germination and growth were enhanced. Subsequent studies have shown that while germination in the absence of competition is adequate on mineral soil of a Podzol A under a wide variety of light and...

  4. Metabolic activity of tree saps of different origin towards cultured human cells in the light of grade correspondence analysis and multiple regression modeling

    Directory of Open Access Journals (Sweden)

    Artur Wnorowski

    2017-06-01

    Full Text Available Tree saps are nourishing biological media commonly used for beverage and syrup production. Although the nutritional aspect of tree saps is widely acknowledged, the exact relationship between the sap composition, origin, and effect on the metabolic rate of human cells is still elusive. Thus, we collected saps from seven different tree species and conducted composition-activity analysis. Saps from trees of Betulaceae, but not from Salicaceae, Sapindaceae, nor Juglandaceae families, were increasing the metabolic rate of HepG2 cells, as measured using tetrazolium-based assay. Content of glucose, fructose, sucrose, chlorides, nitrates, sulphates, fumarates, malates, and succinates in sap samples varied across different tree species. Grade correspondence analysis clustered trees based on the saps’ chemical footprint indicating its usability in chemotaxonomy. Multiple regression modeling showed that glucose and fumarate present in saps from silver birch (Betula pendula Roth., black alder (Alnus glutinosa Gaertn., and European hornbeam (Carpinus betulus L. are positively affecting the metabolic activity of HepG2 cells.

  5. Analyzing tree cores to detect petroleum hydrocarbon-contaminated groundwater at a former landfill site in the community of Happy Valley-Goose Bay, eastern Canadian subarctic

    DEFF Research Database (Denmark)

    Fonkwe, Merline L D; Trapp, Stefan

    2016-01-01

    -gas chromatography-mass spectrometry. BTEX compounds were detected in tree cores, corroborating known groundwater contamination. A zone of anomalously high concentrations of total BTEX constituents was identified and recommended for monitoring by groundwater wells. Tree cores collected outside the landfill site......This research examines the feasibility of analyzing tree cores to detect benzene, toluene, ethylbenzene, and m, p, o-xylene (BTEX) compounds and methyl tertiary-butyl ether (MTBE) in groundwater in eastern Canada subarctic environments, using a former landfill site in the remote community of Happy...... Valley-Goose Bay, Labrador. Petroleum hydrocarbon contamination at the landfill site is the result of environmentally unsound pre-1990s disposal of households and industrial solid wastes. Tree cores were taken from trembling aspen, black spruce, and white birch and analyzed by headspace...

  6. Contamination of pine and birch wood dust with microscopic fungi and determination of its sterol contents.

    Science.gov (United States)

    Stuper-Szablewska, Kinga; Rogoziński, Tomasz; Perkowski, Juliusz

    2017-06-27

    Wood compounds, especially sterols, are connected with the level of contamination with microscopic fungi. Within this study, tests were conducted on wood dust samples collected at various work stations in a pine and birch timber conversion plant. Their contamination with mycobiota was measured as the concentration of ergosterol (ERG) by ultra performance liquid chromatography (UPLC). Another aim of this study was to assess the effect of contamination with microscopic fungi on the sterol contents in wood dusts. Analyses were conducted on five sterols: desmosterol, cholesterol, lanosterol, stigmasterol, and β-sitosterol using UPLC and their presence was confirmed using gas chromatography/mass spectrometry (GC/MS). The results of chemical analyses showed the greatest contamination with mycobiota in birch wood dust. We also observed varied contents of individual sterols depending on the wood dust type. Their highest concentration was detected in birch dust. The discriminant analysis covering all tested compounds as predictors showed complete separation of all tested wood dust types. The greatest discriminatory power was found for stigmasterol, desmosterol, and ergosterol.

  7. The effect of cisplatin administration on certain trace elements homeostasis in rats and the protective effect of silver birch (Betula pendula) sap.

    Science.gov (United States)

    Muselin, Florin; Dumitrescu, Eugenia; Berbecea, Adina; Doma, Alexandru Octavian; Brezovan, Diana; Savici, Jelena; Trif, Alexandra; Cristina, Romeo Teodor

    2018-02-07

    A clinically active structure with known antitumor activities is cisplatin (CDDP), but this it comes with toxicity characteristics which can be faded by the beneficial effects of Silver birch (Betula pendula) sap. We aimed to assess the cisplatin activity on: Mn, Mg, Cu, Fe and Zn homeostasis in rats and to observe the effect of birch sap. Healthy Wistar rats (n = 10/group) were divided in four groups: Control: receiving 1 mL saline I.P. way + water; E1: cisplatin 20 mg kgbw -1 , I.P.; E2: cisplatin 20 mg kgbw -1 , I.P. + birch sap and Control sap group: 1 mL saline I.P. + birch sap. Blood was collected: at the trial's start and after 48 h, and blood and organs (liver, kidney and spleen) for the cytoarchitecture investigation and readings were sampled after seven days. Samples were processed in nitric acid by microwave digestion and readings were completed by flame atomic absorption spectroscopy, the outcomes being statistically analyzed by ANOVA. Cisplatin produced a significant imbalance in the trace elements homeostasis, the birch sap administration recovering them usual homeostasis status. Comparatively with the Control, rats exposed to cisplatin presented a not significant (p > 0.05) decrease of Zn (-26.74%) and Mg (-10.25%), a significant (p  0.05) increase of Mn (+28.16%). Birch sap administration after Cisplatin was followed by restoration or nevertheless significant increase (p sap against diverse cisplatin deleterious side-effects. Copyright © 2018 Elsevier GmbH. All rights reserved.

  8. Tree species composition affects the abundance of rowan (Sorbus aucuparia L.) in urban forests in Finland.

    Science.gov (United States)

    Hamberg, Leena; Lehvävirta, Susanna; Kotze, D Johan; Heikkinen, Juha

    2015-03-15

    Recent studies have shown a considerable increase in the abundance of rowan (Sorbus aucuparia) saplings in urban forests in Finland, yet the reasons for this increase are not well understood. Here we investigated whether canopy cover or tree species composition, i.e., the basal areas of different tree species in Norway spruce dominated urban forests, affects the abundances of rowan seedlings, saplings and trees. Altogether 24 urban forest patches were investigated. We sampled the number of rowan and other saplings, and calculated the basal areas of trees. We showed that rowan abundance was affected by tree species composition. The basal area of rowan trees (≥ 5 cm in diameter at breast height, dbh) decreased with increasing basal area of Norway spruce, while the cover of rowan seedlings increased with an increase in Norway spruce basal area. However, a decrease in the abundance of birch (Betula pendula) and an increase in the broad-leaved tree group (Acer platanoides, Alnus glutinosa, Alnus incana, Amelanchier spicata, Prunus padus, Quercus robur, Rhamnus frangula and Salix caprea) coincided with a decreasing number of rowans. Furthermore, rowan saplings were scarce in the vicinity of mature rowan trees. Although it seems that tree species composition has an effect on rowan, the relationship between rowan saplings and mature trees is complex, and therefore we conclude that regulating tree species composition is not an easy way to keep rowan thickets under control in urban forests in Finland. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Proteomic Analysis of Responsive Proteins Induced in Japanese Birch Plantlet Treated with Salicylic Acid

    Directory of Open Access Journals (Sweden)

    Hiromu Suzuki

    2014-07-01

    Full Text Available The present study was performed to unravel the mechanisms of systemic acquired resistance (SAR establishment and resistance signaling pathways against the canker-rot fungus (Inonotus obliquus strain IO-U1 infection in Japanese birch plantlet No.8. Modulation of protein-profile induced by salicylic acid (SA-administration was analyzed, and SA-responsive proteins were identified. In total, 5 specifically expressed, 3 significantly increased, and 3 significantly decreased protein spots were identified using liquid chromatography/tandem mass spectrometry (LC/MS/MS and the sequence tag method. These proteins were malate dehydrogenase, succinate dehydrogenase, phosphoglycerate kinase, diaminopimalate decarboxylase, arginase, chorismate mutase, cyclophilin, aminopeptidase, and unknown function proteins. These proteins are considered to be involved in SAR-establishment mechanisms in the Japanese birch plantlet No 8.

  10. Birch Bark Dry Extract by Supercritical Fluid Technology: Extract Characterisation and Use for Stabilisation of Semisolid Systems

    Directory of Open Access Journals (Sweden)

    Markus Armbruster

    2017-03-01

    Full Text Available Triterpene compounds like betulin, betulinic acid, erythrodiol, oleanolic acid and lupeol are known for many pharmacological effects. All these substances are found in the outer bark of birch. Apart from its pharmacological effects, birch bark extract can be used to stabilise semisolid systems. Normally, birch bark extract is produced for this purpose by extraction with organic solvents. Employing supercritical fluid technology, our aim was to develop a birch bark dry extract suitable for stabilisation of lipophilic gels with improved properties while avoiding the use of toxic solvents. With supercritical carbon dioxide, three different particle formation methods from supercritical solutions have been tested. First, particle deposition was performed from a supercritical solution in an expansion chamber. Second, the Rapid Expansion of Supercritical Solutions (RESS method was used for particle generation. Third, a modified RESS-procedure, forming the particles directly into the thereby gelated liquid, was developed. All three methods gave yields from 1% to 5.8%, depending on the techniques employed. The triterpene composition of the three extracts was comparable: all three gave more stable oleogels compared to the use of an extract obtained by organic solvent extraction. Characterizing the rheological behaviour of these gels, a faster gelling effect was seen together with a lower concentration of the extract required for the gel formation with the supercritical fluid (SCF-extracts. This confirms the superiority of the supercritical fluid produced extracts with regard to the oleogel forming properties.

  11. Birch veneer and plywood demand: projected needs of the industry

    Science.gov (United States)

    Clark E. McDonald

    1969-01-01

    Production of hardwood plywood in the United States has increased steadily from 1955 to 1967 - almost doubling during this period (table 1). The peak year for shipments of hardwood plywood was 1965, for all species (1,668,313,000 square feet surface measure) and also for birch ( 600,72 3,000 square feet surface measure). The U.S. Bureau of Census figures are not...

  12. Recycling of wood- and peat-ash. A successful way to establish full plant cover and dense birch stand on a cut-away peatland

    Energy Technology Data Exchange (ETDEWEB)

    Huotari, N.

    2012-07-01

    Mechanical harvesting of peat changes the original mire ecosystem completely, and without active measures these areas may remain non-vegetated even for decades. Afforestation is one of the most popular after-use options for cut-away peatlands in Finland since it has both economic and aesthetic values. Recycling of wood-ash as a fertilizer has been studied extensively in peatlands drained for forestry. Wood-ash is reported to promote tree growth in these areas without any significant negative impact to the environment and could, therefore, be a suitable option also on cut-away peatlands. However, the environmental effects of ash-fertilization on cut-away areas and on ground vegetation are not fully understood. The impact of wood- and peat-ash application on the early establishment of ground vegetation and downy birch (Betula pubescens) seedlings and on post-fertilization element concentrations in plants and peat substrate were studied in a cut-away peatland. Six treatments of wood-ash, peat-ash, biotite or Forest PK-fertilizer were replicated in three blocks in different mixtures and quantities corresponding to 50 kg ha-1 of phosphorus. All the fertilizers accelerated the revegetation of the bare peat surface significantly, whereas the establishment of plants in the unfertilized area was non-existent even several years after the peat harvesting had ceased. The most striking difference between the wood- and peat-ash-fertilizers and the commercial Forest PK-fertilizer was the extensive coverage of fire-loving moss species in all the areas where ash was spread. Wood- and peat-ash application also accelerated the germination and early establishment of downy birch seedlings more efficiently than the PK-fertilizer. Ground vegetation proved to be highly important in increasing the early biomass production and carbon sequestration on ash-fertilized cut-away peatland. In addition, the below-ground biomass was equal to the above-ground biomass, or even greater. Both wood- and

  13. A dose rate causes no fluctuating asymmetry indexes changes in silver birch (Betula pendula (L.) Roth.) leaves and Scots pine (Pinus sylvestris L.) needles in the Chernobyl Exclusion Zone.

    Science.gov (United States)

    Kashparova, Elena; Levchuk, Sviatoslav; Morozova, Valeriia; Kashparov, Valery

    2018-06-04

    The assessment of the fluctuating asymmetry based on measurement of the parameters of left and right parts of silver birch (Betula pendula (L.) Roth.) leaves and relative sizes of pairs of Scots pine (Pinus sylvestris L.) needles from the Chernobyl Exclusion Zone (ChEZ) was carried out. Twelve samples of both birch leaves and pairs of needles were collected from 10 trees at 5 sites in the Chernobyl Exclusion Zone and also at one control site located outside the ChEZ. Values of gamma dose rate in the air varied between the sites from 0.1 to 40 μGy h -1 . Activity concentrations of 90 Sr and 137 Cs in the birch leaves varied over the range of 0.9÷2460 kBq kg -1 and 0.1÷339 kBq·kg -1 (DW), respectively. In addition to the above, in the Scots pine needles, these ranges were 0.7 ÷1970 kBq kg -1 f for 90 Sr and 0.1÷78 kBq kg -1 (DW) for 137 Cs. From the values of the radionuclides activity concentrations in the plants, the internal dose rate is estimated to be in the range of 0.1 ÷ 274 μGy h -1 . The main sources of the internal dose rate were radiation of 90 Sr and 90 Y. Indices of fluctuating asymmetry of silver birch leaves and Scots pine needles varied over the range of 0.048 ± 0.007 ÷ 0.060 ± 0.009 and 0.014 ± 0.002 ÷ 0.018 ± 0.002, respectively, and did not statistically differ for all experimental sites. The indices also did not depend on the external or internal dose rate of ionizing radiation for plants. The above findings seem to be consistent with other research effort in terms of understanding the response of organisms to chronic pollutant exposure and the long-term effects of large scale nuclear accidents. Copyright © 2018 Elsevier Ltd. All rights reserved.

  14. MACC regional multi-model ensemble simulations of birch pollen dispersion in Europe

    NARCIS (Netherlands)

    Sofiev, M.; Berger, U.; Prank, M.; Vira, J.; Arteta, J.; Belmonte, J.; Bergmann, K.C.; Chéroux, F.; Elbern, H.; Friese, E.; Galan, C.; Gehrig, R.; Khvorostyanov, D.; Kranenburg, R.; Kumar, U.; Marécal, V.; Meleux, F.; Menut, L.; Pessi, A.M.; Robertson, L.; Ritenberga, O.; Rodinkova, V.; Saarto, A.; Segers, A.; Severova, E.; Sauliene, I.; Siljamo, P.; Steensen, B.M.; Teinemaa, E.; Thibaudon, M.; Peuch, V.H.

    2015-01-01

    This paper presents the first ensemble modelling experiment in relation to birch pollen in Europe. The seven-model European ensemble of MACC-ENS, tested in trial simulations over the flowering season of 2010, was run through the flowering season of 2013. The simulations have been compared with

  15. Representing Boolean Functions by Decision Trees

    KAUST Repository

    Chikalov, Igor

    2011-01-01

    A Boolean or discrete function can be represented by a decision tree. A compact form of decision tree named binary decision diagram or branching program is widely known in logic design [2, 40]. This representation is equivalent to other forms

  16. Simulation of water-surface elevations for a hypothetical 100-year peak flow in Birch Creek at the Idaho National Engineering and Environmental Laboratory, Idaho

    International Nuclear Information System (INIS)

    Berenbrock, C.; Kjelstrom, L.C.

    1997-01-01

    Delineation of areas at the Idaho National Engineering and Environmental Laboratory that would be inundated by a 100-year peak flow in Birch Creek is needed by the US Department of Energy to fulfill flood-plain regulatory requirements. Birch Creek flows southward about 40 miles through an alluvium-filled valley onto the northern part of the Idaho National Engineering and Environmental laboratory site on the eastern Snake River Plain. The lower 10-mile reach of Birch Creek that ends in Birch Creek Playa near several Idaho National Engineering and Environmental Laboratory facilities is of particular concern. Twenty-six channel cross sections were surveyed to develop and apply a hydraulic model to simulate water-surface elevations for a hypothetical 100-year peak flow in Birch Creek. Model simulation of the 100-year peak flow (700 cubic feet per second) in reaches upstream from State Highway 22 indicated that flow was confined within channels even when all flow was routed to one channel. Where the highway crosses Birch Creek, about 315 cubic feet per second of water was estimated to move downstream--115 cubic feet per second through a culvert and 200 cubic feet per second over the highway. Simulated water-surface elevation at this crossing was 0.8 foot higher than the elevation of the highway. The remaining 385 cubic feet per second flowed southwestward in a trench along the north side of the highway. Flow also was simulated with the culvert removed. The exact location of flood boundaries on Birch Creek could not be determined because of the highly braided channel and the many anthropogenic features (such as the trench, highway, and diversion channels) in the study area that affect flood hydraulics and flow. Because flood boundaries could not be located exactly, only a generalized flood-prone map was developed

  17. Thinning of Tree Stands in the Arctic Zone of Krasnoyarsk Territory With Different Ecological Conditions

    Directory of Open Access Journals (Sweden)

    V. I. Polyakov

    2014-10-01

    Full Text Available In 2001 six permanent sample plots (PSP were established in forest stands differing in degrees of damage by pollution from the Norilsk industrial region. In 2004 the second forest inventory was carried out at these PSP for evaluation of pollutant impacts on stand condition changes. During both inventory procedures the vigor state of every tree was visually categorized according to 6-points scale of «Forest health regulations in Russian Federation». The changeover of tree into fall was also taken into account. Two types of Markov’s models simulating thinning process in tree stands within different ecological conditions has been developed: 1 based on assessment for probability of tree survival during three years; 2 in terms of evaluation of matrix for probability on change of vigor state category in the same period. The reconstruction of tree mortality from 1979 after industrial complex «Nadezda» setting into operation was realized on the basis of probability estimation of dead standing trees conservation during three years observed. The forecast of situation was carried out up to 2030. Using logistic regression the probability of tree survival was established depending on four factors: degree of tree damage by pollutants, tree species, stand location in relief and tree age. The acquired results make it possible to single out an impact of pollutants to tree stands’ resistance from other factors. There was revealed the percent of tree fall, resulted by pollution. The evaluation scale of SO2 gas resistance of tree species was constructed: birch, spruce, larch. Larch showed the highest percent of fall because of pollution.

  18. Bio energy production in birch and hybrid aspen after addition of residue based fertilizers - establishment of fertilization trials; Bioenergiproduktion hos bjoerk och hybridasp vid tillfoersel av restproduktbaserade goedselmedel - etablering av goedslingsfoersoek

    Energy Technology Data Exchange (ETDEWEB)

    Thelin, Gunnar (EkoBalans Fenix AB, Malmoe (Sweden))

    2009-03-15

    Sewage sludge and wood ashes could be used as fertilizers in order to increase forest tree production. In southern Sweden forest growth normally increases with approximately 10 % after ash recycling due to increased N and/or P availability. P is added with the ashes and the pH-increasing effect of the wood ash can lead to increased N net mineralization. Other positive effects of wood ash recycling are improved nutrient sustainability and less acid run-off water. Possible negative effects are heavy metal accumulation, if the content of one or more heavy metals of the recycled ash exceeds the heavy metal content of the harvested biomass, and nitrate leaching if the vegetation cannot take up nitrified N. It is important to evaluate the sustainability of fertilization systems based on residues such as sludge and wood ash. Wood ash does not contain N and the P concentration often is too low for the ashes to function as an NP fertilizer. Thus N and sometimes P must be added. Sludge is an interesting alternative. The main purpose of the project is to study sustainable production of forest bio energy in intensively cultivated birch and hybrid aspen stands. Another purpose is to establish experiments that can be used for long term studies and as demonstration objects. In the first few years the goal is to study the short term effects of residue based fertilization compared to conventional NPK fertilization on tree nutrient uptake, nutrient leaching, sustainability and economy. In the long term the goal is to design appropriate fertilization strategies in a residue based fertilization system for the intensive cultivation of birch and hybrid aspen without negative side effects such as large scale nutrient leaching. Four field experiments were established in 2008 and one additional experiment in hybrid aspen will be established in the spring of 2009. Elevated bud N and P concentrations after fertilization with both Ashes+N and NPK means good possibilities for future growth

  19. Seasonal dynamics of saproxylic beetles (Coleoptera occurring in decaying birch (Betula spp. wood in the Kampinos National Park

    Directory of Open Access Journals (Sweden)

    Sawoniewicz Michał

    2015-09-01

    Full Text Available The aim of the study was to identify the seasonal changes in the number of saproxylic beetles connected with birch in the Kampinos National Park. The research was conducted for 12 consecutive months in research areas representing 10 different site types. The beetles were collected from wood using photoeclectors. The largest number of species was collected in April and the lowest in January. An increase in number occurred during spring and summer months for species associated only with rotting wood, fructifications of tree fungi, the subcortical environment and hollows. In the same period the number of species not associated or potentially associated with decaying trees and wood decreased. During winter months, the differences in the number of trapped specimens were the smallest. The proportion of zoophagous species amongst the collected specimen increased in autumn and winter. The share of saprophagous species was the highest during the summer-autumn period and the share of mycetophages (jointly with myxomycophages was the highest during spring and summer. We distinguished two separate groups of Coleoptera with the first one (‘summer group’ including species trapped during late-spring and summer months, while the second one (‘winter group’ includes species found in autumn, winter and early-spring months. In the ‘summer group’, an average of 55.8 species was trapped each month with 331.2 specimen of Coleoptera, while in the ʻwinter group’ an average of 56.1 species with 228.4 Coleoptera specimen were caught.

  20. Hardrock Elastic Physical Properties: Birch's Seismic Parameter Revisited

    Science.gov (United States)

    Wu, M.; Milkereit, B.

    2014-12-01

    Identifying rock composition and properties is imperative in a variety of fields including geotechnical engineering, mining, and petroleum exploration, in order to accurately make any petrophysical calculations. Density is, in particular, an important parameter that allows us to differentiate between lithologies and estimate or calculate other petrophysical properties. It is well established that compressional and shear wave velocities of common crystalline rocks increase with increasing densities (i.e. the Birch and Nafe-Drake relationships). Conventional empirical relations do not take into account S-wave velocity. Physical properties of Fe-oxides and massive sulfides, however, differ significantly from the empirical velocity-density relationships. Currently, acquiring in-situ density data is challenging and problematic, and therefore, developing an approximation for density based on seismic wave velocity and elastic moduli would be beneficial. With the goal of finding other possible or better relationships between density and the elastic moduli, a database of density, P-wave velocity, S-wave velocity, bulk modulus, shear modulus, Young's modulus, and Poisson's ratio was compiled based on a multitude of lab samples. The database is comprised of isotropic, non-porous metamorphic rock. Multi-parameter cross plots of the various elastic parameters have been analyzed in order to find a suitable parameter combination that reduces high density outliers. As expected, the P-wave velocity to S-wave velocity ratios show no correlation with density. However, Birch's seismic parameter, along with the bulk modulus, shows promise in providing a link between observed compressional and shear wave velocities and rock densities, including massive sulfides and Fe-oxides.

  1. Evaluating the efficacy of epinastine ophthalmic solution using a conjunctivitis allergen challenge model in patients with birch pollen allergic conjunctivitis.

    Science.gov (United States)

    Tagawa, Yoshiaki; Namba, Kenichi; Nakazono, Yumi; Iwata, Daiju; Ishida, Susumu

    2017-04-01

    The efficacy of epinastine 0.05% ophthalmic solution for pollen allergic conjunctivitis has already been shown in a conjunctival allergen challenge (CAC) test using cedar pollen as a challenge. The present study investigated the efficacy of this solution against birch pollen conjunctivitis in a CAC test. Ten adult subjects (eight males and two females) with asymptomatic birch pollen conjunctivitis were enrolled in this study. The average age of the subjects was 41.1 years. This study was conducted during a period without birch pollen dispersion. In each subject, the epinastine 0.05% ophthalmic solution was instilled in one eye, and an artificial tear fluid was instilled in the fellow eye in a double-blind manner. Five minutes or 4 h after the drug instillation, both eyes were challenged with an optimal concentration of birch pollen, and ocular itching and conjunctival hyperemia were then graded. Tears were collected before the drug instillation and 20 min after the pollen challenge, and the histamine level was measured. The ocular itching scores and palpebral conjunctival hyperemia scores of the epinastine-treated eyes were significantly lower than those of the contralateral control eyes when the eyes were pretreated with the drug 4 h before the CAC. There was a significant correlation between the tear histamine level and mean ocular itching score of three time points (3, 5 and 10 min) following the CAC in the control eyes but not the epinastine-treated eyes. Epinastine is effective in suppressing ocular itching and conjunctival hyperemia in birch pollen conjunctivitis. Copyright © 2017 Japanese Society of Allergology. Production and hosting by Elsevier B.V. All rights reserved.

  2. On The Etymology of Some Lichen Genera Names

    OpenAIRE

    Yavuz, Mustafa

    2016-01-01

    This study aims to investigate the etymology of some lichens’ genera names used in modern taxonomical botany. Growing on rocks, trees and even on soil, lichens are the only terrestrial cryptogamic organisms containing a fungal and an algal partner. Within this study, it has been focused to diagnose and improve an understanding of the similarities and differences between the names of lichen genera by comparing them in several languages. The etymological data collected during the study belongs ...

  3. Betula pendula: A Promising Candidate for Phytoremediation of TCE in Northern Climates.

    Science.gov (United States)

    Lewis, Jeffrey; Qvarfort, Ulf; Sjöström, Jan

    2015-01-01

    Betula pendula (Silver birch) trees growing on two contaminated sites were evaluated to assess their capacity to phytoscreen and phytoremediate chlorinated aliphatic compounds and heavy metals. Both locations are industrially-contaminated properties in central Sweden. The first was the site of a trichloroethylene (TCE) spill in the 1980s while the second was polluted with heavy metals by burning industrial wastes. In both cases, sap and sapwood from Silver birch trees were collected and analyzed for either chlorinated aliphatic compounds or heavy metals. These results were compared to analyses of the surface soil, vadose zone pore air and groundwater. Silver birch demonstrated the potential to phytoscreen and possibly phytoremediate TCE and related compounds, but it did not demonstrate the ability to effectively phytoextract heavy metals when compared with hyperaccumulator plants. The capacity of Silver birch to phytoremediate TCE appears comparable to tree species that have been employed in field-scale TCE phytoremediation efforts, such as Populus spp. and Eucalyptus sideroxylon rosea.

  4. Metal resistance in populations of red maple (Acer rubrum L.) and white birch (Betula papyrifera Marsh.) from a metal-contaminated region and neighbouring non-contaminated regions

    International Nuclear Information System (INIS)

    Kirkey, Fallon M.; Matthews, Jennifer; Ryser, Peter

    2012-01-01

    Metal resistance in populations of Acer rubrum and Betula papyrifera in the industrially contaminated region of Sudbury, Ontario, was compared with resistance in populations from neighbouring uncontaminated regions. In two one-season experiments, seedlings were grown outdoors on contaminated (mainly Cu, Ni) and uncontaminated substrates. Sudbury populations of both species responded less to contamination than populations from uncontaminated regions. In A. rubrum this difference was small. For both species, Sudbury plants were smaller when grown on uncontaminated substrate. B. papyrifera from Sudbury grew better on contaminated substrate than the other populations. There is indication of variation in metal resistance within the populations from the non-contaminated regions. The data shows that trees may develop adaptive resistance to heavy metals, but the low degree of resistance indicates that the development of such resistances are slower than observed for herbaceous species with shorter generation times. - Highlights: ► Metal resistance in trees from an industrially contaminated region was investigated. ► Both red maple and white birch have developed some degree of resistance. ► There is indication of a cost for resistance. ► Populations from non-contaminated regions show variation in response to contamination. - Adaptive metal resistance can also develop in trees with long generation times, but the degree of resistance is lower than for herbaceous species from the same region.

  5. 20th century climate warming and tree-limit rise in the southern Scandes of Sweden.

    Science.gov (United States)

    Kullman, L

    2001-03-01

    Climate warming by ca. 0.8 degree C between the late-19th and late-20th century, although with some fluctuations, has forced multispecies elevational tree-limit advance by > 100 m for the principal tree species in the Swedish part of the Scandinavian mountain range. Predominantly, these processes imply growth in height of old-established individuals and less frequently upslope migration of new individuals. After a slight retardation during some cooler decades after 1940, a new active phase of tree-limit advance has occurred with a series of exceptionally mild winters and some warm summers during the 1990s. The magnitude of total 20th century tree-limit rise varies with topoclimate and is mainly confined to wind-sheltered and snow-rich segments of the landscape. Thickening of birch tree stands in the "advance belt" has profoundly altered the general character of the subalpine/low alpine landscape and provides a positive feedback loop for further progressive change and resilience to short-term cooling episodes. All upslope tree-limit shifts and associated landscape transformations during the 20th century have occurred without appreciable time lags, which constitutes knowledge fundamental to the generation of realistic models concerning vegetation responses to potential future warming. The new and elevated pine tree-limit may be the highest during the past 4000 14C years. Thus, it is tentatively inferred that the 20th century climate is unusually warm in a late-Holocene perspective.

  6. High autumn temperature delays spring bud burst in boreal trees, counterbalancing the effect of climatic warming.

    Science.gov (United States)

    Heide, O M

    2003-09-01

    The effect of temperature during short-day (SD) dormancy induction was examined in three boreal tree species in a controlled environment. Saplings of Betula pendula Roth, B. pubescens Ehrh. and Alnus glutinosa (L.) Moench. were exposed to 5 weeks of 10-h SD induction at 9, 15 and 21 degrees C followed by chilling at 5 degrees C for 40, 70, 100 and 130 days and subsequent forcing at 15 degrees C in a 24-h photoperiod for 60 days. In all species and with all chilling periods, high temperature during SD dormancy induction significantly delayed bud burst during subsequent flushing at 15 degrees C. In A. glutinosa, high temperature during SD dormancy induction also significantly increased the chilling requirement for dormancy release. Field experiments at 60 degrees N with a range of latitudinal birch populations revealed a highly significant correlation between autumn temperature and days to bud burst in the subsequent spring. September temperature alone explained 20% of the variation between years in time of bud burst. In birch populations from 69 and 71 degrees N, which ceased growing and shed their leaves in August when the mean temperature was 15 degrees C, bud burst occurred later than expected compared with lower latitude populations (56 degrees N) in which dormancy induction took place more than 2 months later at a mean temperature of about 6 degrees C. It is concluded that this autumn temperature response may be important for counterbalancing the potentially adverse effects of higher winter temperatures on dormancy stability of boreal trees during climate warming.

  7. Fragmentation of random trees

    International Nuclear Information System (INIS)

    Kalay, Z; Ben-Naim, E

    2015-01-01

    We study fragmentation of a random recursive tree into a forest by repeated removal of nodes. The initial tree consists of N nodes and it is generated by sequential addition of nodes with each new node attaching to a randomly-selected existing node. As nodes are removed from the tree, one at a time, the tree dissolves into an ensemble of separate trees, namely, a forest. We study statistical properties of trees and nodes in this heterogeneous forest, and find that the fraction of remaining nodes m characterizes the system in the limit N→∞. We obtain analytically the size density ϕ s of trees of size s. The size density has power-law tail ϕ s ∼s −α with exponent α=1+(1/m). Therefore, the tail becomes steeper as further nodes are removed, and the fragmentation process is unusual in that exponent α increases continuously with time. We also extend our analysis to the case where nodes are added as well as removed, and obtain the asymptotic size density for growing trees. (paper)

  8. Hourly pattern of allergenic alder and birch pollen concentrations in the air: Spatial differentiation and the effect of meteorological conditions

    Science.gov (United States)

    Borycka, K.; Kasprzyk, I.

    2018-06-01

    In temperate climate widespread alder and birch are an important source of strong aeroallergens. The diurnal pattern of airborne pollen concentrations depends on the rhythm of pollen release from anthers as well as weather conditions, convection air currents, long-distance transport, pollen trap location and local vegetation. The aim of the study was to present a diurnal pattern of Alnus (alder) and Betula (birch) pollen concentrations in the air in a horizontal and vertical gradient and examine the weather parameters that had the greatest impact on the pattern. The study was conducted in Rzeszów City, southeast Poland over three years. Pollen grains were collected using a Hirst volumetric spore trap at three sampling points: two at 12 m the agl, and one at 1.5 m agl. Data were analysed using circular statistics and a nonlinear function. For alder, three models of hourly patterns were elaborated and the most common presented early morning minimum and early afternoon maximum. For birch, the most common model has one peak at night and a marked decrease in concentrations in early morning, although a second model has peak during early afternoon. A model with 3 peaks is much less common. These models are characteristic for warm temperate climate regions, where alders and birches are common. The diurnal patterns did not depend on the localization of traps or proximity of the pollen source, although these factors influenced the hourly concentrations, with higher values observed at roof level. Significant relationships between the hourly pollen counts and meteorological parameters were observed only for alder. Three incidents of increasing birch pollen concentrations were observed during the first two hours of precipitation and linked to a convection effect. Unstable weather conditions caused by air convection might strongly modify the circadian pattern and cause the nightly peaks concentrations. The general results are that people suffering from allergies may be exposed

  9. Medicinal properties of fungi occurring on Betula sp. trees. A review

    Directory of Open Access Journals (Sweden)

    Smolibowska Joanna

    2016-09-01

    Full Text Available The article presents the chemical costituents and pharmacological properties of polyporoid fungi found on birch, namely Piptoporus betulinus, Inonotus obliquus, Lenzites betulina, Fomes fomentarius, and Trametes versicolor. The in vitro and in vivo studies on the effect of different extracts from above-mentioned fungi on the human organism shown anti-cancer, anti-inflammatory, antiviral, antibacterial and immunostimulant activity, conditioned by the presence of such compounds as polysaccharides, polyphenols or terpenes. These fungi are commonly found in Poland and may superbly compete with Ganoderma lucidum (Reishi or Lentinula edodes (Shitake used in Asia for medicinal purposes.

  10. Why linear Birch and U/sub s/-U/sub p/ expansions work

    International Nuclear Information System (INIS)

    Grover, R.

    1987-07-01

    The equivalence of the Birch-Murnoghan equation to a linear U/sub s/-U/sub p/ equation was illustrated in the previous paper. Here it is shown in a direct manner how the virial theorem boundary localization of valence electron kinetic energy changes lead to the convergence of the Eulerian strain expansion about the zero-pressure state

  11. Crown Release Increases Diameter Growth and Bole Sprouting of Pole-Size Yellow Birch

    Science.gov (United States)

    Gayne G. Erdmann; Ralph M. Jr. Peterson

    1971-01-01

    During the second and third years after release, dominant, codominant, and intermediate pole-size yellow birch grew nearly twice as fast in diameter as unreleased poles. Growth rates were also related to foliage density. Epicormic sprouting was increased by crown release but most sprouting occured in the second log.

  12. Microwave sensing of tree trunks

    Science.gov (United States)

    Jezova, Jana; Mertens, Laurence; Lambot, Sebastien

    2015-04-01

    was divided into three sections to separate parts with different moisture (heartwood and sapwood) or empty space (decays). For easier manipulation with the antenna we developed a special ruler for measuring the distance along the scans. Instead of the surveying wheel we read the distance with a camera, which was fixed on the antenna and focused on the ruler with a binary pattern. Hence, during whole measurement and the data processing we were able to identify an accurate position on the tree in view of the scan. Some preliminary measurements on the trees were also conducted. They were performed using a GSSI 900 MHz antenna. Several tree species (beech, horse-chestnut, birch, ...) in Louvain-la-Neuve and Brussels, Belgium, have been investigated to see the internal structure of the tree decays. The measurements were carried out mainly by circumferential measurement around the trunk and also by vertical measurement along the trunk for approximate detection of the cavity. The comparison between the numerical simulations, simplified tree trunk model and real data from trees is presented. This research is funded by the Fonds de la Recherche Scientifique (FNRS, Belgium) and benefits from networking activities carried out within the EU COST Action TU1208 "Civil Engineering Applications of Ground Penetrating Radar".

  13. TREDRA, Minimal Cut Sets Fault Tree Plot Program

    International Nuclear Information System (INIS)

    Fussell, J.B.

    1983-01-01

    1 - Description of problem or function: TREDRA is a computer program for drafting report-quality fault trees. The input to TREDRA is similar to input for standard computer programs that find minimal cut sets from fault trees. Output includes fault tree plots containing all standard fault tree logic and event symbols, gate and event labels, and an output description for each event in the fault tree. TREDRA contains the following features: a variety of program options that allow flexibility in the program output; capability for automatic pagination of the output fault tree, when necessary; input groups which allow labeling of gates, events, and their output descriptions; a symbol library which includes standard fault tree symbols plus several less frequently used symbols; user control of character size and overall plot size; and extensive input error checking and diagnostic oriented output. 2 - Method of solution: Fault trees are generated by user-supplied control parameters and a coded description of the fault tree structure consisting of the name of each gate, the gate type, the number of inputs to the gate, and the names of these inputs. 3 - Restrictions on the complexity of the problem: TREDRA can produce fault trees with a minimum of 3 and a maximum of 56 levels. The width of each level may range from 3 to 37. A total of 50 transfers is allowed during pagination

  14. Specific features of the recent accumulation of 137Cs in tree roots of forest ecosystems within the zone of radioactive contamination

    Science.gov (United States)

    Shcheglov, Alexey; Tsvetnova, Ol'ga; Klyashtorin, Alexey; Popova, Evgenia

    2015-04-01

    Despite numerous studies of the accumulation of technogenic radionuclides in the root systems, no clear regularities of this process have been established. The tendencies found in the works of Russian and foreign researchers are rather discrepant. Some authors argue that the accumulation of radionuclides in the roots is more pronounced than that in the aboveground parts of the plants (Skovorodnikova, 2005; Romantseva, 2012; Sennerby et al., 1994; Mamikhin, 2002; Fircks et al., 2002}. Other works attest to a higher accumulation of radionuclides in the aboveground pars (Juznic et al., 1990; Chibowski, 2000; Zhianski et al., 2005), which is also typical of the stable isotopes of these elements, including 133Cs (Dong Jin Kang, YongJin Seo, Tsukasa Saito et al,2012). It is also stated that the accumulation of radionuclides in the aboveground and underground parts of plants may differ in dependence on the soil-ecological conditions and other factors (Kozhakhanov et al., 2011; Grabovskyi et al., 2013). The aim of our study was to evaluate the accumulation of 137Cs in the root systems of arboreal plants in forest ecosystems within the near zone of the Chernobyl fallout on the plots with similar soil and phytocenotic features. Pine and birch stands were studied within the 30-km-wide exclusion zone of the Chernobyl Nuclear Power Station in Ukraine in 1992-1993, when the density of the radioactive contamination of the upper (0-20 cm) layer with 137Cs reached 2153.8 kBq/m2), and in Bryansk oblast of Russia in 2013-2014, when the density of contamination varied from 1458.4 kBq/m2 (pine stand) to 2578.3 kBq/m2 (birch stand). The tree layer in these ecosystems was dominated by Pinus sylvestris (L.) and Betula pendula (Roth.), respectively. Quercus robur (L.), Picea abies (L.), and Sorbus aucuparia (L.) were also present. The specific activity of 137Cs was measured in the samples from the aboveground parts of model trees and their roots differentiated by size (0-3, 3-10, 10

  15. The gravity apple tree

    International Nuclear Information System (INIS)

    Aldama, Mariana Espinosa

    2015-01-01

    The gravity apple tree is a genealogical tree of the gravitation theories developed during the past century. The graphic representation is full of information such as guides in heuristic principles, names of main proponents, dates and references for original articles (See under Supplementary Data for the graphic representation). This visual presentation and its particular classification allows a quick synthetic view for a plurality of theories, many of them well validated in the Solar System domain. Its diachronic structure organizes information in a shape of a tree following similarities through a formal concept analysis. It can be used for educational purposes or as a tool for philosophical discussion. (paper)

  16. Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

    Science.gov (United States)

    Mai, Uyen; Sayyari, Erfan; Mirarab, Siavash

    2017-01-01

    Phylogenetic trees inferred using commonly-used models of sequence evolution are unrooted, but the root position matters both for interpretation and downstream applications. This issue has been long recognized; however, whether the potential for discordance between the species tree and gene trees impacts methods of rooting a phylogenetic tree has not been extensively studied. In this paper, we introduce a new method of rooting a tree based on its branch length distribution; our method, which minimizes the variance of root to tip distances, is inspired by the traditional midpoint rerooting and is justified when deviations from the strict molecular clock are random. Like midpoint rerooting, the method can be implemented in a linear time algorithm. In extensive simulations that consider discordance between gene trees and the species tree, we show that the new method is more accurate than midpoint rerooting, but its relative accuracy compared to using outgroups to root gene trees depends on the size of the dataset and levels of deviations from the strict clock. We show high levels of error for all methods of rooting estimated gene trees due to factors that include effects of gene tree discordance, deviations from the clock, and gene tree estimation error. Our simulations, however, did not reveal significant differences between two equivalent methods for species tree estimation that use rooted and unrooted input, namely, STAR and NJst. Nevertheless, our results point to limitations of existing scalable rooting methods.

  17. Long-term development of experimental mixtures of Scots pine (Pinus sylvestris L. and silver birch (Betula pendula Roth. in northern Britain

    Directory of Open Access Journals (Sweden)

    Bill Mason

    2016-07-01

    Full Text Available The Caledonian pinewoods of northern Scotland are a priority conservation habitat in Europe which are dominated by Scots pine (Pinus sylvestris, but varying proportions of a number of broadleaved species such as silver birch (Betula pendula can occur in these forests. Better understanding of the dynamics of mixed Scots pine-birch stands would be helpful in informing current initiatives to restore and increase the area of the pinewood ecosystem. Some evidence is provided by two experiments established in the 1960s which compared plots of pure Scots pine and pure birch with two treatments where the two species were mixed in 3:1 and 1:1 ratios. Some fifty years later, Scots pine was the more vigorous of the two species in these experiments, being both taller and significantly larger in diameter. The highest basal area was generally found in the pure Scots pine plots and the values in the mixed plots tended to be intermediate between those of the two component species. Examination of the growth in the mixed plots showed a slight, but non-significant, tendency towards overyielding. This appeared to be due to Scots pine growth being better than predicted, while that of birch was slightly less than predicted. These results suggest that in these mixtures, which are composed of two light demanding species, the main mechanism driving long-term performance is competition for light and there is little evidence of any complementary effect. These results suggest that any strategy seeking to increase the long-term representation of broadleaves such as birch in the Caledonian pinewoods will need to create discrete blocks that are large enough to withstand the competitive pressures exerted by the pine.

  18. SNAD: sequence name annotation-based designer

    Directory of Open Access Journals (Sweden)

    Gorbalenya Alexander E

    2009-08-01

    Full Text Available Abstract Background A growing diversity of biological data is tagged with unique identifiers (UIDs associated with polynucleotides and proteins to ensure efficient computer-mediated data storage, maintenance, and processing. These identifiers, which are not informative for most people, are often substituted by biologically meaningful names in various presentations to facilitate utilization and dissemination of sequence-based knowledge. This substitution is commonly done manually that may be a tedious exercise prone to mistakes and omissions. Results Here we introduce SNAD (Sequence Name Annotation-based Designer that mediates automatic conversion of sequence UIDs (associated with multiple alignment or phylogenetic tree, or supplied as plain text list into biologically meaningful names and acronyms. This conversion is directed by precompiled or user-defined templates that exploit wealth of annotation available in cognate entries of external databases. Using examples, we demonstrate how this tool can be used to generate names for practical purposes, particularly in virology. Conclusion A tool for controllable annotation-based conversion of sequence UIDs into biologically meaningful names and acronyms has been developed and placed into service, fostering links between quality of sequence annotation, and efficiency of communication and knowledge dissemination among researchers.

  19. Remote sensing of changes in morphology and physiology of trees under stress

    Science.gov (United States)

    Olson, C. E., Jr.; Rohde, W. G.; Ward, J. M.

    1970-01-01

    Results of continuing studies of forest trees subjected to varying types of stress are reported. Both greenhouse and field studies are included. Greenhouse work with tree seedlings exposed to varying levels of NaCl and CaCl2 in the soil indicated that, in the initial stages, palisade cells shrink and the amount of air space in the leaf increases. As the severity of damage increases, the cells of the spongy mesophyll shrink and flatten, and the amount of air space in the leaf decreases. Statistical analysis of foliar reflectance and associated moisture content data led to a series of regression equations for predicting foliar moisture content from reflectance data. Equations were calculated for three species, yellow birch (Betula alleghaniensis Britton), sugar maple (Acer saccharum Marsh.) and white ash (Fraxinus americana L.) having multiple correlation coefficients of 0.98, 0.94 and 0.93 respectively. Interpretation of multispectral imagery of the Ann Arbor Forestry Test Site (NASA Site 190) provided evidence that infections of Fomes annosus can be detected in the early stages. Infections of two needle cast diseases were also detected in conifer plantations in the test site. A study of automatic interpretation of multispectral scanner imagery for tree species recognition provided encouraging results.

  20. The effects of logging on the architecture of Bornean rainforest trees

    NARCIS (Netherlands)

    Sterck, F.J.; Hille Ris Lamberis, R.; Bongers, F.J.J.M.

    2003-01-01

    Tree parameters were compared between trees in a logged (logged eight years ago) and an unlogged forest in Borneo. This comparison was made for 3 to 10 cm diameter at breast height (dbh) trees of four tree species, namely, Mallotus penangensis, M. wrayi, Shorea johorensis and S. parvifolia. The

  1. Contrasting short-term performance of mountain birch (Betula pubescens ssp. czerepanovii treeline along a latitudinal continentality-maritimity gradient in the southern Swedish Scandes

    Directory of Open Access Journals (Sweden)

    Lisa Öberg

    2012-01-01

    Full Text Available Positional treeline shift is a fundamental aspect and indicator of high-mountain vegetation response to climate change. This study analyses treeline performance during the period 2005/2007 -2010/2011 in the Swedish Scandes. Focus is on mountain birch (Betula pubescens ssp. czerepanovii along a regional climatic maritimity-continentality gradient. Treeline upshift by 3.0 yr-1 in the maritime part differed significantly from retreat by 0.4 m yr-1 in the continental part of the transect. This discrepancy is discussed in terms of differential warming-induced snow cover phenology patterns and their influence on soil moisture conditions. In the continental area, earlier and more complete melting of prior relatively rare late-lying snow patches, even high above the treeline, has progressed to a state when melt water irrigation ceases. As a consequence, soil drought sets back the vigor of existing birches and precludes sexual regeneration and upslope advance of the treeline. In the maritime area, extensive and deep snow packs still exist above the treeline and constrain its position, although some release is taking place in the current warm climate. Thereby, the birch treeline expands upslope as the alpine snow patches shrink, but continue to provide sufficient melt water throughout the summer. Treeline rise appears to have been based primarily on seed regeneration over the past few decades. This is a novelty, since prior (1915-2007 treeline advance was accomplished mainly by in situ shifts in growth form of relict krummholz birches, in some cases millennial-old, prevailing above the treeline. By the snow phenology mechanism, birch can benefit from climate warming in the maritime region, which contrasts with the situation in the continental region. This discrepancy should be accounted for in projective models. In a hypothetical case of sustained warming, the subalpine birch forest belt may expand less extensively than often assumed, although advance may

  2. Why linear Birch and U/sub s/-U/sub p/ expansions work

    International Nuclear Information System (INIS)

    Grover, R.

    1987-11-01

    The equivalence of the Birch-Murnaghan equation to a linear U/sub s/-U/sub p/ equation was illustrated in the previous paper. Here we show in a direct manner how the virial theorem and the effect of core exclusion on valence electron kinetic energy changes lead to the convergence of the Eulerian strain expansion about the zero-pressure state. 7 refs., 4 tabs

  3. Value tree analysis

    International Nuclear Information System (INIS)

    Keeney, R.; Renn, O.; Winterfeldt, D. von; Kotte, U.

    1985-01-01

    What are the targets and criteria on which national energy policy should be based. What priorities should be set, and how can different social interests be matched. To answer these questions, a new instrument of decision theory is presented which has been applied with good results to controversial political issues in the USA. The new technique is known under the name of value tree analysis. Members of important West German organisations (BDI, VDI, RWE, the Catholic and Protestant Church, Deutscher Naturschutzring, and ecological research institutions) were asked about the goals of their organisations. These goals were then ordered systematically and arranged in a hierarchical tree structure. The value trees of different groups can be combined into a catalogue of social criteria of acceptability and policy assessment. The authors describe the philosophy and methodology of value tree analysis and give an outline of its application in the development of a socially acceptable energy policy. (orig.) [de

  4. Linking and Cutting Spanning Trees

    Directory of Open Access Journals (Sweden)

    Luís M. S. Russo

    2018-04-01

    Full Text Available We consider the problem of uniformly generating a spanning tree for an undirected connected graph. This process is useful for computing statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle graphs, we prove that this approach significantly outperforms existing algorithms. For general graphs, experimental results show that the chain converges quickly. This yields an efficient algorithm due to the use of proper fast data structures. To obtain the mixing time of the chain we describe a coupling, which we analyze for cycle graphs and simulate for other graphs.

  5. INDIGENOUS COMMUNITY TREE INVENTORY: ASSESSMENT OF DATA QUALITY

    Directory of Open Access Journals (Sweden)

    M. F. Fauzi

    2016-09-01

    Full Text Available The citizen science program to supplement authoritative data in tree inventory has been well implemented in various countries. However, there is a lack of study that assesses correctness and accuracy of tree data supplied by citizens. This paper addresses the issue of tree data quality supplied by semi-literate indigenous group. The aim of this paper is to assess the correctness of attributes (tree species name, height and diameter at breast height and the accuracy of tree horizontal positioning data supplied by indigenous people. The accuracy of the tree horizontal position recorded by GNSS-enable smart phone was found to have a RMSE value of ± 8m which is not suitable to accurately locate individual tree position in tropical rainforest such as the Royal Belum State Park. Consequently, the tree species names contributed by indigenous people were only 20 to 30 percent correct as compared with the reference data. However, the combination of indigenous respondents comprising of different ages, experience and knowledge working in a group influence less attribute error in data entry and increase the use of free text rather than audio methods. The indigenous community has a big potential to engage with scientific study due to their local knowledge with the research area, however intensive training must be given to empower their skills and several challenges need to be addressed.

  6. Indirectional statistics and the significance of an asymmetry discovered by Birch

    International Nuclear Information System (INIS)

    Kendall, D.G.; Young, G.A.

    1984-01-01

    Birch (1982, Nature, 298, 451) reported an apparent 'statistical asymmetry of the Universe'. The authors here develop 'indirectional analysis' as a technique for investigating statistical effects of this kind and conclude that the reported effect (whatever may be its origin) is strongly supported by the observations. The estimated pole of the asymmetry is at RA 13h 30m, Dec. -37deg. The angular error in its estimation is unlikely to exceed 20-30deg. (author)

  7. Age-related patterns of forest complexity and carbon storage in pine and aspen-birch ecosystems of northern Minnesota, USA

    International Nuclear Information System (INIS)

    Bradford, J.B.; Kastendick, D.N.

    2010-01-01

    Forest managers are now developing strategies to mitigate increases in atmospheric carbon dioxide (CO 2 ) and help stands to adapt to new climatic conditions. This study characterized the influence of stand age on carbon storage and sequestration in chronosequences of even-aged red pine and aspen-birch stands in northern Minnesota. The aim of the study was to determine the impact of age-related management strategies on carbon storage and forest complexity. The pine chronosequences ranged from 7 to 160 years. Aspen chronosequences ranged from 6 to 133 years. Field measurements of the trees were compiled into 5 carbon pools. Carbon storage variables were averaged within each stand in order to conduct a regression analysis. The study showed that forest complexity was positively related to stand age in all of the measured response variables except species richness. Relationships between compositional complexity and stand age depended on forest type. Total carbon storage also increased with age. Results of the study showed that age plays an important role in overall ecosystem carbon storage. The study can be used to provide insights into the overall costs and benefits of forest management strategies that favour younger or older forests. 45 refs., 2 figs.

  8. Hydrogenated graphenes by birch reduction: influence of electron and proton sources on hydrogenation efficiency, magnetism, and electrochemistry

    Czech Academy of Sciences Publication Activity Database

    Eng, A.Y.S.; Sofer, Z.; Huber, Š.; Bouša, D.; Maryško, Miroslav; Pumera, M.

    2015-01-01

    Roč. 21, č. 7 (2015), 16828-16838 ISSN 0947-6539 Institutional support: RVO:68378271 Keywords : hydrogenated graphenes * birch reduction * magnetism * electrochemistry * hydrogenation efficiency Subject RIV: CA - Inorganic Chemistry Impact factor: 5.771, year: 2015

  9. Efficient fault tree handling - the Asea-Atom approach

    International Nuclear Information System (INIS)

    Ericsson, G.; Knochenhauer, M.; Mills, R.

    1985-01-01

    In recent years there has been a trend in Swedish Probabilistic Safety Analysis (PSA) work towards coordination of the tools and methods used, in order to facilitate exchange of information and review. Thus, standardized methods for fault tree drawing and basic event coding have been developed as well as a number of computer codes for fault tree handling. The computer code used by Asea-Atom is called SUPER-TREE. As indicated by the name, the key feature is the concept of one super tree containing all the information necessary in the fault tree analysis, i.e. system fault trees, sequence fault trees and component data base. The code has proved to allow great flexibility in the choice of level of detail in the analysis

  10. Tree species classification using within crown localization of waveform LiDAR attributes

    Science.gov (United States)

    Blomley, Rosmarie; Hovi, Aarne; Weinmann, Martin; Hinz, Stefan; Korpela, Ilkka; Jutzi, Boris

    2017-11-01

    Since forest planning is increasingly taking an ecological, diversity-oriented perspective into account, remote sensing technologies are becoming ever more important in assessing existing resources with reduced manual effort. While the light detection and ranging (LiDAR) technology provides a good basis for predictions of tree height and biomass, tree species identification based on this type of data is particularly challenging in structurally heterogeneous forests. In this paper, we analyse existing approaches with respect to the geometrical scale of feature extraction (whole tree, within crown partitions or within laser footprint) and conclude that currently features are always extracted separately from the different scales. Since multi-scale approaches however have proven successful in other applications, we aim to utilize the within-tree-crown distribution of within-footprint signal characteristics as additional features. To do so, a spin image algorithm, originally devised for the extraction of 3D surface features in object recognition, is adapted. This algorithm relies on spinning an image plane around a defined axis, e.g. the tree stem, collecting the number of LiDAR returns or mean values of returns attributes per pixel as respective values. Based on this representation, spin image features are extracted that comprise only those components of highest variability among a given set of library trees. The relative performance and the combined improvement of these spin image features with respect to non-spatial statistical metrics of the waveform (WF) attributes are evaluated for the tree species classification of Scots pine (Pinus sylvestris L.), Norway spruce (Picea abies (L.) Karst.) and Silver/Downy birch (Betula pendula Roth/Betula pubescens Ehrh.) in a boreal forest environment. This evaluation is performed for two WF LiDAR datasets that differ in footprint size, pulse density at ground, laser wavelength and pulse width. Furthermore, we evaluate the

  11. Allergy immunotherapy with a hypoallergenic recombinant birch pollen allergen rBet v 1-FV in a randomized controlled trial.

    Science.gov (United States)

    Klimek, Ludger; Bachert, Claus; Lukat, Karl-Friedrich; Pfaar, Oliver; Meyer, Hanns; Narkus, Annemie

    2015-01-01

    Pollen extracts and chemically modified allergoids are used successfully in allergen immunotherapy (AIT). Recombinant extracts offer potential advantages with respect to pharmaceutical quality, standardization and dosing. A hypoallergenic recombinant folding variant of the major birch pollen allergen (rBet v 1-FV) was compared with an established native birch preparation. A pre-seasonal, randomized, actively controlled phase II study was performed in birch pollen allergic rhino-conjunctivitis with or without asthma, GINA I/ II. 51 patients (24 rBet v 1-FV, 27 native extract) started therapy with subcutaneous allergen immunotherapy (SCIT). Primary end-point was a combined symptom medication score (SMS), changes in nasal provocation test, visual rating score and specific antibody responses secondary end-points. After one pre-seasonal treatment course the combined SMS was 5.86 (median; IQR: 14.02) for the rBet v 1-FV group versus 12.40 (median; IQR: 9.32) for the comparator during the three weeks pollen season (p = 0.330). After treatment in the second year, scores were 3.00 (median; IQR: 6.50) and 2.93 (4.86) respectively. Allergen tolerance in a nasal provocation test improved to a comparable extent in both groups. Significant increases in birch pollen-specific IgG1 and IgG4 were observed in both treatment groups following the first treatment phase and remained significantly raised until the end of the study. In this first in man, proof of concept phase II trial no statistical difference between rBet v 1-FV and an established natural pollen extract could be observed. rBet v 1-FV could be administered in higher doses than the native protein with no increase in adverse effects. The study was registered in clinicalTrials.gov (NCT00266526).

  12. Diagnostic value of scratch-chamber test, skin prick test, histamine release and specific IgE in birch-allergic patients with oral allergy syndrome to apple

    DEFF Research Database (Denmark)

    Osterballe, M; Scheller, R; Stahl Skov, P

    2003-01-01

    BACKGROUND: The aim of the study was to examine the diagnostic value of skin prick test (SPT), scratch-chamber test (SCT), histamine release (HR) and specific immunoglobulin E (IgE) in birch-allergic patients with oral allergy syndrome to apple. METHODS: Ten birch-allergic patients with oral...... a detailed case history about symptoms of oral allergy syndrome combined with a SPT with fresh apple peel or A72 will be useful....

  13. New records, names and combinations of scaly tree ferns (Cyatheaceae) in eastern Malesia

    NARCIS (Netherlands)

    Coritico, F.P.; Amoroso, V.B.; Lehnert, M.

    2017-01-01

    Several scaly tree ferns (Cyatheaceae) from eastern Malesia are transferred from Cyathea s.lat. to other genera: Alsophila roroka from Sulawesi; Alsophila lamoureuxii from New Guinea; Alsophila binayana, A. bisquamata, A. mapahuwensis, A. murkelensis, A. ohaensis, and Sphaeropteris pukuana from

  14. Silver birch and climate change: variable growth and carbon allocation responses to elevated concentrations of carbon dioxide and ozone

    International Nuclear Information System (INIS)

    Riikonen, J.; Holopainen, T.; Oksanen, E.; Lindsberg, M-M.; Lappi, J.; Peltonen, P.; Vapaavuori, E.

    2004-01-01

    The effects of elevated concentrations of carbon dioxide and ozone were studied on growth, biomass allocation and leaf area of field-grown ozone-tolerant (Clone 4) and ozone-sensitive (Clone 80) European silver birch trees. Seven-year old trees of both types were exposed for three years to outside and chamber control, (1) twice ambient ozone, (2) twice ambient carbon dioxide, and (3) twice ambient carbon dioxide and twice ambient ozone. No effect on biomass allocation was observed when results of the two clones were analyzed together. Total leaf area showed an increase, and leaf abscission appeared delayed in response to elevated carbon dioxide. Elevated ozone caused the dry mass of roots, branches and mean leaf size to decrease, and autumnal leaf abscission occurred earlier than usual in both clones. In general. the effects of elevated ozone were small, however, the interaction between elevated carbon dioxide and elevated oxygen were significant. When results from the two clones were analyzed separately, stem diameter, volume growth and total biomass of Clone 80 increased when exposed to elevated concentrations of carbon dioxide; elevated concentrations of ozone appeared to have no effect. In Clone 4 elevated ozone caused significant decrease in root and branch biomass, but the effects of elevated carbon dioxide were minimal. Responses to elevated ozone exposure were observed only under ambient carbon dioxide conditions. This response is believed to reflect the greater quantity of carbohydrates available for detoxification and repair under elevated carbon dioxide conditions. Alternatively, the response may be due to decreased stomatal conductance, thus decreased ozone uptake under elevated carbon dioxide conditions. 45 refs., 6 tabs., 4 figs

  15. PhyloExplorer: a web server to validate, explore and query phylogenetic trees

    Directory of Open Access Journals (Sweden)

    Auberval Nicolas

    2009-05-01

    Full Text Available Abstract Background Many important problems in evolutionary biology require molecular phylogenies to be reconstructed. Phylogenetic trees must then be manipulated for subsequent inclusion in publications or analyses such as supertree inference and tree comparisons. However, no tool is currently available to facilitate the management of tree collections providing, for instance: standardisation of taxon names among trees with respect to a reference taxonomy; selection of relevant subsets of trees or sub-trees according to a taxonomic query; or simply computation of descriptive statistics on the collection. Moreover, although several databases of phylogenetic trees exist, there is currently no easy way to find trees that are both relevant and complementary to a given collection of trees. Results We propose a tool to facilitate assessment and management of phylogenetic tree collections. Given an input collection of rooted trees, PhyloExplorer provides facilities for obtaining statistics describing the collection, correcting invalid taxon names, extracting taxonomically relevant parts of the collection using a dedicated query language, and identifying related trees in the TreeBASE database. Conclusion PhyloExplorer is a simple and interactive website implemented through underlying Python libraries and MySQL databases. It is available at: http://www.ncbi.orthomam.univ-montp2.fr/phyloexplorer/ and the source code can be downloaded from: http://code.google.com/p/taxomanie/.

  16. Heavy metal accumulation in trees growing on contaminated sites in Central Europe

    International Nuclear Information System (INIS)

    Unterbrunner, R.; Puschenreiter, M.; Sommer, P.; Wieshammer, G.; Tlustos, P.; Zupan, M.; Wenzel, W.W.

    2007-01-01

    Metal-accumulating woody species have been considered for phytoextraction of metal-contaminated sites. We investigated Zn and Cd accumulation in tissues of adult trees and associated herbaceous species collected from contaminated areas in Central Europe. We found considerable Cd and Zn accumulation in various willow, poplar and birch species with up to 116 mg Cd kg -1 and 4680 mg Zn kg -1 in leaves of Salix caprea. Annual variation of Cd and Zn concentrations in leaves of Salix caprea were small, indicating that data obtained in different years can be compared. Metal concentrations in leaves were not related to total (aqua regia) or labile (1 M NH 4 NO 3 extract) concentrations in soil but the accumulation factors (leaf concentration: soil concentration) for Cd and Zn followed an inverse log type function. Metal partitioning between tissues showed a minimum in the wood, with increasing concentrations of Cd and Zn towards the leaves and fine roots. - Adult field-grown Salix caprea, Populus tremula and other tree species accumulate up to 4680 mg Zn kg -1 and 116 mg Cd kg -1 in their leaves

  17. Heavy metal accumulation in trees growing on contaminated sites in Central Europe

    Energy Technology Data Exchange (ETDEWEB)

    Unterbrunner, R. [University of Natural Resources and Applied Life Sciences, Vienna - BOKU, Department of Forest and Soil Sciences, Peter Jordan Strasse 82, A-1190 Vienna (Austria); Puschenreiter, M. [University of Natural Resources and Applied Life Sciences, Vienna - BOKU, Department of Forest and Soil Sciences, Peter Jordan Strasse 82, A-1190 Vienna (Austria)]. E-mail: markus.puschenreiter@boku.ac.at; Sommer, P. [University of Natural Resources and Applied Life Sciences, Vienna - BOKU, Department of Forest and Soil Sciences, Peter Jordan Strasse 82, A-1190 Vienna (Austria); Wieshammer, G. [University of Natural Resources and Applied Life Sciences, Vienna - BOKU, Department of Forest and Soil Sciences, Peter Jordan Strasse 82, A-1190 Vienna (Austria); Tlustos, P. [Czech University of Agriculture Prague, 165 21 Praha 6-Suchdol (Czech Republic); Zupan, M. [University of Ljubljana, Biotechnical Faculty, Agronomy department, Jamnikarjeva 101, 1000 Ljubljana (Slovenia); Wenzel, W.W. [University of Natural Resources and Applied Life Sciences, Vienna - BOKU, Department of Forest and Soil Sciences, Peter Jordan Strasse 82, A-1190 Vienna (Austria)

    2007-07-15

    Metal-accumulating woody species have been considered for phytoextraction of metal-contaminated sites. We investigated Zn and Cd accumulation in tissues of adult trees and associated herbaceous species collected from contaminated areas in Central Europe. We found considerable Cd and Zn accumulation in various willow, poplar and birch species with up to 116 mg Cd kg{sup -1} and 4680 mg Zn kg{sup -1} in leaves of Salix caprea. Annual variation of Cd and Zn concentrations in leaves of Salix caprea were small, indicating that data obtained in different years can be compared. Metal concentrations in leaves were not related to total (aqua regia) or labile (1 M NH{sub 4}NO{sub 3} extract) concentrations in soil but the accumulation factors (leaf concentration: soil concentration) for Cd and Zn followed an inverse log type function. Metal partitioning between tissues showed a minimum in the wood, with increasing concentrations of Cd and Zn towards the leaves and fine roots. - Adult field-grown Salix caprea, Populus tremula and other tree species accumulate up to 4680 mg Zn kg{sup -1} and 116 mg Cd kg{sup -1} in their leaves.

  18. Growth and Survival of Northern Hardwood Sprouts After Burning

    Science.gov (United States)

    Donald A. Perala

    1974-01-01

    Root collar sprouting of nine hardwoods was measured annually after a prescribed burn. Basswood, red oak, and paper birch were the most vigorous sprouters; sugar maple and yellow birch the least; and American elm, bur oak, ironwood and red maple were intermediate. Parent tree diameter influenced spreading.

  19. Selection of morphological features of pollen grains for chosen tree taxa

    Directory of Open Access Journals (Sweden)

    Agnieszka Kubik-Komar

    2018-05-01

    Full Text Available The basis of aerobiological studies is to monitor airborne pollen concentrations and pollen season timing. This task is performed by appropriately trained staff and is difficult and time consuming. The goal of this research is to select morphological characteristics of grains that are the most discriminative for distinguishing between birch, hazel and alder taxa and are easy to determine automatically from microscope images. This selection is based on the split attributes of the J4.8 classification trees built for different subsets of features. Determining the discriminative features by this method, we provide specific rules for distinguishing between individual taxa, at the same time obtaining a high percentage of correct classification. The most discriminative among the 13 morphological characteristics studied are the following: number of pores, maximum axis, minimum axis, axes difference, maximum oncus width, and number of lateral pores. The classification result of the tree based on this subset is better than the one built on the whole feature set and it is almost 94%. Therefore, selection of attributes before tree building is recommended. The classification results for the features easiest to obtain from the image, i.e. maximum axis, minimum axis, axes difference, and number of lateral pores, are only 2.09 pp lower than those obtained for the complete set, but 3.23 pp lower than the results obtained for the selected most discriminating attributes only.

  20. Taxonomic names, metadata, and the Semantic Web

    Directory of Open Access Journals (Sweden)

    Roderic D. M. Page

    2006-01-01

    Full Text Available Life Science Identifiers (LSIDs offer an attractive solution to the problem of globally unique identifiers for digital objects in biology. However, I suggest that in the context of taxonomic names, the most compelling benefit of adopting these identifiers comes from the metadata associated with each LSID. By using existing vocabularies wherever possible, and using a simple vocabulary for taxonomy-specific concepts we can quickly capture the essential information about a taxonomic name in the Resource Description Framework (RDF format. This opens up the prospect of using technologies developed for the Semantic Web to add ``taxonomic intelligence" to biodiversity databases. This essay explores some of these ideas in the context of providing a taxonomic framework for the phylogenetic database TreeBASE.

  1. Risk assessments for forest trees: The performance of the ozone flux versus the AOT concepts

    International Nuclear Information System (INIS)

    Karlsson, P.E.; Braun, S.; Broadmeadow, M.; Elvira, S.; Emberson, L.; Gimeno, B.S.; Le Thiec, D.; Novak, K.; Oksanen, E.; Schaub, M.; Uddling, J.; Wilkinson, M.

    2007-01-01

    Published ozone exposure-response relationships from experimental studies with young trees performed at different sites across Europe were re-analysed in order to test the performance of ozone exposure indices based on AOTX (Accumulated exposure Over a Threshold of X nmol mol -1 ) and AF st Y (Accumulated Stomatal Flux above a threshold of Y nmol m -2 s -1 ). AF st 1.6 was superior, as compared to AOT40, for explaining biomass reductions, when ozone sensitive species with differing leaf morphology were included in the analysis, while this was not the case for less sensitive species. A re-analysis of data with young black cherry trees, subject to different irrigation regimes, indicated that leaf visible injuries were more strongly related to the estimated stomatal ozone uptake, as compared to the ozone concentration in the air. Experimental data with different clones of silver birch indicated that leaf thickness was also an important factor influencing the development of ozone induced leaf visible injury. - Ozone stomatal flux based indices were superior, as compared to AOT40, for explaining biomass reductions and leaf visible injury

  2. CO2 elevation improves photosynthetic performance in progressive warming environment in white birch seedlings [v1; ref status: indexed, http://f1000r.es/up

    Directory of Open Access Journals (Sweden)

    Shouren Zhang

    2013-01-01

    Full Text Available White birch (Betula paperifera Mash seedlings were exposed to progressively warming in greenhouses under ambient and elevated CO2 concentrations for 5 months to explore boreal tree species’ potential capacity to acclimate to global climate warming and CO2 elevation. In situ foliar gas exchange, in vivo carboxylation characteristics and chlorophyll fluorescence were measured at temperatures of 26oC and 37oC. Elevated CO2 significantly increased net photosynthetic rate (Pn at both measurement temperatures, and Pn at 37oC was higher than that at 26oC under elevated CO2. Stomatal conductance (gs was lower at 37oC than at 26oC, while transpiration rate (E was higher at 37oC than that at 26oC. Elevated CO2 significantly increased instantaneous water-use efficiency (WUE at both 26oC and 37oC, but WUE was markedly enhanced at 37oC under elevated CO2. The effect of temperature on maximal carboxylation rate (Vcmax, PAR-saturated electron transport rate (Jmax and triose phosphate utilization (TPU varied with CO2, and the Vcmax and Jmax were significantly higher at 37oC than at 26oC under elevated CO2. However, there were no significant interactive effects of CO2 and temperature on TPU. The actual photochemical efficiency of PSII (DF/ Fm’, total photosynthetic linear electron transport rate through PSII (JT and the partitioning of JT to carboxylation (Jc were higher at 37oC than at 26oC under elevated CO2. Elevated CO2 significantly suppressed the partitioning of JT to oxygenation (Jo/JT. The data suggest that the CO2 elevation and progressive warming greatly enhanced photosynthesis in white birch seedlings in an interactive fashion.

  3. CO2 response to rewetting of hydrophobic soils - Can soil water repellency inhibit the 'Birch effect'?

    Science.gov (United States)

    Sanchez-Garcia, Carmen; Urbanek, Emilia; Doerr, Stefan

    2017-04-01

    Rewetting of dry soils is known to cause a short-term CO2 pulse commonly known as the 'Birch effect'. The displacement of CO2 with water during the process of wetting has been recognised as one of the sources of this pulse. The 'Birch effect' has been extensively observed in many soils, but some studies report a lack of such phenomenon, suggesting soil water repellency (SWR) as a potential cause. Water infiltration in water repellent soils can be severely restricted, causing overland flow or increased preferential flow, resulting in only a small proportion of soil pores being filled with water and therefore small gas-water replacement during wetting. Despite the suggestions of a different response of CO2 fluxes to wetting under hydrophobic conditions, this theory has never been tested. The aim of this study is to test the hypothesis that CO2 pulse does not occur during rewetting of water repellent soils. Dry homogeneous soils at water-repellent and wettable status have been rewetted with different amounts of water. CO2 flux as a response to wetting has been continuously measured with the CO2 flux analyser. Delays in infiltration and non-uniform heterogeneous water flow were observed in water repellent soils, causing an altered response in the CO2 pulse in comparison to typically observed 'Birch effect' in wettable systems. The main conclusion from the study is that water repellency not only affects water relations in soil, but has also an impact on greenhouse gas production and transport and therefore should be included as an important parameter during the sites monitoring and modelling of gas fluxes.

  4. The influence of air temperature and relative humidity on dynamics of water potential in Betula pendula (Betulaceae trees

    Directory of Open Access Journals (Sweden)

    G. P. Тikhova

    2017-02-01

    Full Text Available Linear multiple models were developed to describe diurnal and seasonal dynamics of water potential (Ψ of the foliated shoots in the plants of Betula genus related to air temperature and relative humidity in the middle taiga (southern Karelia. The results of the study revealed unidirectional changes, but different effect strength of air temperature and relative humidity on Ψ of the foliated shoots of common silver birch (Betula pendula Roth and curly (Karelian birch (Betula pendula Roth var. carelica. It was shown that increasing air temperature 1°С results in similar decreasing of Ψ value equal to 0.037–0.038 MPa in both of the birches (p > 0.05. Since the diurnal air temperature range achieves 10–15 °С, the contribution of this factor may be up to 0.57 MPa. On the contrary, the contribution of relative air humidity to Ψ value differs significantly in distinct birch forms (p < 0.05. In this case the change range of Ψ value in silver birch and curly birch may be up to 0.46 (0.015 MPa/1 % RH and 0.52 МПа (0.017 MPa/1 % RH, respectively. The results indicate that curly birch responds to the increase of relative air humidity with higher magnification of Ψ in comparison with common silver birch.

  5. TSkim: A tool for skimming ROOT trees

    International Nuclear Information System (INIS)

    Chamont, David

    2010-01-01

    Like many HEP researchers, the members of the Fermi collaboration have chosen to store their experiment data within ROOT trees. A frequent activity of such physicists is the tuning of selection criteria which define the events of interest, thus cutting and pruning the ROOT trees so to extract all the data linked to those specific physical events. It is rather straightforward to write a ROOT script to skim a single kind of data, for example the raw measurements of Fermi LAT detector. This proves to be trickier if one wants to process also some simulated or analysis data at the same time, because each kind of data is structured with its own rules for what concerns file names and sizes, tree names, identification of events, etc. TSkim has been designed to facilitate this task. Thanks to a user-defined configuration file which says where to find the run and event identifications in the different kind of trees, TSkim is able to collect all the tree elements which match a given ROOT cut. The tool will also help when loading the shared libraries which describe the experiment data, or when pruning the tree branches. Initially a pair of PERL and ROOT scripts, TSkim is today a fully compiled C++ application, enclosing our ROOT know-how and offering a panel of features going far beyond the original Fermi requirements. In this manuscript, we present TSkim concepts and key features, including a new kind of event list. Any collaboration using ROOT IO could profit from the use of this tool.

  6. Estimating phylogenetic trees from genome-scale data.

    Science.gov (United States)

    Liu, Liang; Xi, Zhenxiang; Wu, Shaoyuan; Davis, Charles C; Edwards, Scott V

    2015-12-01

    The heterogeneity of signals in the genomes of diverse organisms poses challenges for traditional phylogenetic analysis. Phylogenetic methods known as "species tree" methods have been proposed to directly address one important source of gene tree heterogeneity, namely the incomplete lineage sorting that occurs when evolving lineages radiate rapidly, resulting in a diversity of gene trees from a single underlying species tree. Here we review theory and empirical examples that help clarify conflicts between species tree and concatenation methods, and misconceptions in the literature about the performance of species tree methods. Considering concatenation as a special case of the multispecies coalescent model helps explain differences in the behavior of the two methods on phylogenomic data sets. Recent work suggests that species tree methods are more robust than concatenation approaches to some of the classic challenges of phylogenetic analysis, including rapidly evolving sites in DNA sequences and long-branch attraction. We show that approaches, such as binning, designed to augment the signal in species tree analyses can distort the distribution of gene trees and are inconsistent. Computationally efficient species tree methods incorporating biological realism are a key to phylogenetic analysis of whole-genome data. © 2015 New York Academy of Sciences.

  7. Relationship between the Names of People and Enterprises with Plant Origin with Phytotoponyms in Five Croatian Regions.

    Science.gov (United States)

    Sindik, Joško; Carić, Tonko

    2016-04-01

    In this study, the first and last names of people (FN and LN), enterprises (EN) (with plants'species roots in their names) and phytotoponyms (PT) in five Croatian regions are analyzed, in their relationships. The goals of the study were: to determine the correlations between FN, LN, EN and PT; to determine the latent structure of these variables; to forecast number of PT (criterion) on the base of predictors (FN, LN, EN); to determine grouping of the places (within certain regions) as cases by two plants' categorizations; to determine grouping of the plants as cases by regions. We have analyzed 15 places, grouped in five regions, with 39 different plant species. The results revealed that the only principal component highly positively correlated with the variables last name and office name, while the projections for the variables first name (moderate high) and phytotoponyms (low size) were negative. Prediction of the criteria phytotoponyms is satisfactorily good, using three predictors: last name, first name and the office name. First cluster analysis revealed that phytotoponyms are mostly related with trees and deciduous plants, while names are related with trees, deciduous and herbaceous plants. Second cluster analysis obtained clear distinction between regions in dominant PTs, based on certain plants' names. The results indicate clear association between phytotoponyms and names of people.

  8. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.

    Science.gov (United States)

    Fouquier, Jennifer; Rideout, Jai Ram; Bolyen, Evan; Chase, John; Shiffer, Arron; McDonald, Daniel; Knight, Rob; Caporaso, J Gregory; Kelley, Scott T

    2016-02-24

    Fungi play critical roles in many ecosystems, cause serious diseases in plants and animals, and pose significant threats to human health and structural integrity problems in built environments. While most fungal diversity remains unknown, the development of PCR primers for the internal transcribed spacer (ITS) combined with next-generation sequencing has substantially improved our ability to profile fungal microbial diversity. Although the high sequence variability in the ITS region facilitates more accurate species identification, it also makes multiple sequence alignment and phylogenetic analysis unreliable across evolutionarily distant fungi because the sequences are hard to align accurately. To address this issue, we created ghost-tree, a bioinformatics tool that integrates sequence data from two genetic markers into a single phylogenetic tree that can be used for diversity analyses. Our approach starts with a "foundation" phylogeny based on one genetic marker whose sequences can be aligned across organisms spanning divergent taxonomic groups (e.g., fungal families). Then, "extension" phylogenies are built for more closely related organisms (e.g., fungal species or strains) using a second more rapidly evolving genetic marker. These smaller phylogenies are then grafted onto the foundation tree by mapping taxonomic names such that each corresponding foundation-tree tip would branch into its new "extension tree" child. We applied ghost-tree to graft fungal extension phylogenies derived from ITS sequences onto a foundation phylogeny derived from fungal 18S sequences. Our analysis of simulated and real fungal ITS data sets found that phylogenetic distances between fungal communities computed using ghost-tree phylogenies explained significantly more variance than non-phylogenetic distances. The phylogenetic metrics also improved our ability to distinguish small differences (effect sizes) between microbial communities, though results were similar to non

  9. Efficacy and safety of 4 months of sublingual immunotherapy with recombinant Mal d 1 and Bet v 1 in patients with birch pollen-related apple allergy.

    Science.gov (United States)

    Kinaciyan, Tamar; Nagl, Birgit; Faustmann, Sandra; Frommlet, Florian; Kopp, Stephan; Wolkersdorfer, Martin; Wöhrl, Stefan; Bastl, Katharina; Huber, Hans; Berger, Uwe; Bohle, Barbara

    2018-03-01

    Birch pollen-related apple allergy is among the most prevalent food allergies in adolescent/adult subjects and mainly results from sensitization to the major birch pollen allergen Bet v 1 and subsequent cross-reaction with the apple protein Mal d 1. However, specific immunotherapy with birch pollen has inconsistent effects on apple allergy. We sought to compare the safety and efficacy of sublingual immunotherapy (SLIT) with 2 formulations containing either rMal d 1 or rBet v 1 on birch pollen-related apple allergy. Sixty participants with birch pollen-related apple allergy were randomized to daily sublingual application of placebo (n = 20) or 25 μg of rMal d 1 (n = 20) or rBet v 1 (n = 20) for 16 weeks. Adverse events were regularly recorded. Sublingual challenges with standardized doses of rMal d 1, skin prick tests with recombinant allergens, and measurements of allergen-specific IgE and IgG 4 antibodies were performed before and after treatment. Both formulations caused comparable, mainly local adverse events. No systemic reactions occurred. Compared with the placebo and rBet v 1-treated groups, SLIT with rMal d 1 reduced rMal d 1-induced oral symptoms (P = .001 and P = .038) accompanied by longitudinally reduced rMal d 1-specific cutaneous reactions (P = .022) and enhanced IgG 4 /IgE ratios (P = .012). SLIT with rBet v 1 neither improved the clinical reactivity to rMal d 1 nor enhanced rMal d 1-specific IgG 4 /IgE ratios. Participants receiving placebo showed no allergen-specific changes. Sublingual treatment with a recombinant food allergen was safe and clinically effective, as determined by using standardized challenges. We present a promising approach for the effective treatment of birch pollen-related apple allergy. Copyright © 2017 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

  10. Diet preference of Eurasian Beaver (Castor Fiber L., 1758 in the environment of Oderské vrchy and its influence on the tree species composition of river bank stands

    Directory of Open Access Journals (Sweden)

    Jan Dvořák

    2013-01-01

    Full Text Available This paper deals with the dietary behaviour and the tree species preference in the river bank stands in the diet of established population Eurasian Beaver (Castor fiber L., 1758 in the environment of Oderské vrchy; the objective is to assess the suitability of this environment for future development of the Eurasian Beaver and to asses the influence of the beaver’s dietary behaviour on the river bank stands. In the monitored area, the total of 5 tree species with the following preference were recorded: willow (Salix 42.2%, aspen (Populus 28%, dogwood (Comus 15.5%, birch (Betula 7.4% and alder (Alnus 6.9%. The most damaged diameter interval recorded within the all damaged tree species ranges from 2.6 to 6 cm, followed by the interval 6.1–12 cm. Over 61% of the trees felled by the beaver had a bigger diameter. The most sensitive reaction to beaver’s dietary behaviour was shown by aspen (reduction of numbers by 27.6% and by willow (reduction of numbers by 16.6% on the monitored area.

  11. tree and shrub species integration in the crop-livestock farming ...

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    cash for investment in the required activities, easy land certification and market opportunity for tree and shrub products. The tree and shrub .... for its consistency, logical flow, coding and length were amended. .... TABLE 2. List of shrub species identified in the watershed of highlands of central Ethiopia. Scientific name.

  12. 75 FR 8031 - Submission for OMB Review; Comment Request

    Science.gov (United States)

    2010-02-23

    ... will collect information from the permit application regarding the type, number, and identification of... hardwood trees. It attacks many healthy hardwood trees, including maple, horse chestnut, birch, popular, willow, and elm. The beetle bores into the heartwood of a host tree, eventually killing the tree. The U.S...

  13. Representing Boolean Functions by Decision Trees

    KAUST Repository

    Chikalov, Igor

    2011-01-01

    A Boolean or discrete function can be represented by a decision tree. A compact form of decision tree named binary decision diagram or branching program is widely known in logic design [2, 40]. This representation is equivalent to other forms, and in some cases it is more compact than values table or even the formula [44]. Representing a function in the form of decision tree allows applying graph algorithms for various transformations [10]. Decision trees and branching programs are used for effective hardware [15] and software [5] implementation of functions. For the implementation to be effective, the function representation should have minimal time and space complexity. The average depth of decision tree characterizes the expected computing time, and the number of nodes in branching program characterizes the number of functional elements required for implementation. Often these two criteria are incompatible, i.e. there is no solution that is optimal on both time and space complexity. © Springer-Verlag Berlin Heidelberg 2011.

  14. A Novel Approach for Protein-Named Entity Recognition and Protein-Protein Interaction Extraction

    Directory of Open Access Journals (Sweden)

    Meijing Li

    2015-01-01

    Full Text Available Many researchers focus on developing protein-named entity recognition (Protein-NER or PPI extraction systems. However, the studies about these two topics cannot be merged well; then existing PPI extraction systems’ Protein-NER still needs to improve. In this paper, we developed the protein-protein interaction extraction system named PPIMiner based on Support Vector Machine (SVM and parsing tree. PPIMiner consists of three main models: natural language processing (NLP model, Protein-NER model, and PPI discovery model. The Protein-NER model, which is named ProNER, identifies the protein names based on two methods: dictionary-based method and machine learning-based method. ProNER is capable of identifying more proteins than dictionary-based Protein-NER model in other existing systems. The final discovered PPIs extracted via PPI discovery model are represented in detail because we showed the protein interaction types and the occurrence frequency through two different methods. In the experiments, the result shows that the performances achieved by our ProNER and PPI discovery model are better than other existing tools. PPIMiner applied this protein-named entity recognition approach and parsing tree based PPI extraction method to improve the performance of PPI extraction. We also provide an easy-to-use interface to access PPIs database and an online system for PPIs extraction and Protein-NER.

  15. Production of bio-oil via hydrothermal liquefaction of birch sawdust

    International Nuclear Information System (INIS)

    Malins, Kristaps

    2017-01-01

    Highlights: • NaOH has significant impact on hydrothermal liquefaction of birch sawdust. • High yield of bio-oil (54.1%) was obtained under developed optimal conditions. • Compounds in bio-oil have appropriate chemical structure for hydrocarbon synthesis. • The yield of marketable solid residue with potential for industrial application was 7.1%. • Solid residue has high calorific value (29.8 MJ/kg) and C content (74.6 wt.%). - Abstract: The effect of weight ratio of plywood manufacturing by-product birch sawdust (BS) to water (1/2–1/8), reaction temperature (200–340 °C), initial H 2 pressure (0–10 MPa), residence time (5–90 min), catalysts amount (0.25–7.0 wt.%) and type (FeSO 4 , ZnSO 4 , NiSO 4 , Raney-nickel, Ni65%/SiO 2 −Al 2 O 3 , Na 2 CO 3 and NaOH) on hydrothermal liquefaction of BS was investigated. High yield of bio-oil (54.1%) with calorific value (CV) 24.9 MJ/kg under developed optimal experimental conditions in the presence of NaOH (5 wt.%) utilizing weight ratio of BS to water 1/4, residence time 5 min, mixing speed 250 rpm at 300 °C without pressurized particular inert gas or H 2 atmosphere was achieved. Compounds in bio-oil analyzed by gas chromatography-mass spectrometry (GC-MS) have suitable chemical structures for conversion into renewable hydrocarbons. Marketable solid residue (SR) with yield 7.1%, high CV (29.8 MJ/kg) and perspective characteristics for industrial application was obtained. Produced gas in process analyzed by gas chromatography-thermal conductivity detector (GC–TCD) contains 60.1 vol.% of CO 2 .

  16. Changes in the areal extents of the Athabasca River, Birch River, and Cree Creek Deltas, 1950-2014, Peace-Athabasca Delta, Canada

    Science.gov (United States)

    Timoney, Kevin; Lee, Peter

    2016-04-01

    Deltas form where riverborne sediment accumulates at the interface of river mouths and their receiving water bodies. Their areal extent is determined by the net effect of processes that increase their extent, such as sediment accumulation, and processes that decrease their extent, such as erosion and subsidence. Through sequential mapping and construction of river discharge and sediment histories, this study examined changes in the subaerial extents of the Cree Creek and Athabasca River Deltas (both on the Athabasca River system) and the Birch River Delta in northern Canada over the period 1950-2014. The purpose of the study was to determine how, when, and why the deltas changed in areal extent. Temporal growth patterns were similar across the Athabasca and Birch River systems indicative of a climatic signal. Little or no areal growth occurred from 1950 to 1968; moderate growth occurred between 1968 and the early to mid-1980s; and rapid growth occurred between 1992 and 2012. Factors that affected delta progradation included dredging, sediment supply, isostatic drowning, delta front bathymetry, sediment capture efficiency, and storms. In relation to sediment delivered, areal growth rates were lowest in the Athabasca Delta, intermediate in the Birch Delta, and highest in the Cree Creek Delta. Annual sediment delivery is increasing in the Cree Creek Delta; there were no significant trends in annual sediment delivery in the Birch and Athabasca Deltas. There was a lag of up to several years between sediment delivery events and progradation. Periods of delta progradation were associated with low water levels of the receiving basins. Predicted climate-change driven declines in river discharge and lake levels may accelerate delta progradation in the region. In the changing ecosystems of northeastern Alberta, inadequate monitoring of vegetation, landforms, and sediment regimes hampers the elucidation of the nature, rate, and causality of ecosystem changes.

  17. Midwest community tree guide: benefits, costs, and strategic planting

    Science.gov (United States)

    E. Gregory McPherson; James R. Simpson; Paula J. Peper; Scott E. Maco; Shelley L. Gardner; Shauna K. Cozad; Qingfu Xiao

    2006-01-01

    This report quantifies benefits and costs for typical small, medium, and large deciduous (losing their leaves every autumn) trees: crabapple, red oak, and hackberry (see "Common and Scientific Names" section). The analysis assumed that trees were planted in a residential yard or public site (streetside or park) with a 60 percent survival rate over a 40-year...

  18. The distribution of lignin in white birch wood as determined by bromination with TEM-EDXA

    International Nuclear Information System (INIS)

    Saka, S.; Goring, D.A.I.

    1988-01-01

    Ultraviolet absorbance and bromine uptake were measured on various morphological regions of birch wood. To facilitate precise comparison, observations were made on identical locations in successive cross sections. From the data, the concentration of lignin and the ratio of the guaiacyl to syringyl residues were determined. The results obtained were then compared with the previous findings from the use of UV microscopy alone

  19. Modulation of allergic immune responses by mucosal application of recombinant lactic acid bacteria producing the major birch pollen allergen Bet v 1.

    Science.gov (United States)

    Daniel, C; Repa, A; Wild, C; Pollak, A; Pot, B; Breiteneder, H; Wiedermann, U; Mercenier, A

    2006-07-01

    Probiotic lactic acid bacteria (LAB) are able to modulate the host immune system and clinical trials have demonstrated that specific strains have the capacity to reduce allergic symptoms. Therefore, we aimed to evaluate the potential of recombinant LAB producing the major birch pollen allergen Bet v 1 for mucosal vaccination against birch pollen allergy. Recombinant Bet v 1-producing Lactobacillus plantarum and Lactococcus lactis strains were constructed. Their immunogenicity was compared with purified Bet v 1 by subcutaneous immunization of mice. Intranasal application of the live recombinant strains was performed to test their immunomodulatory potency in a mouse model of birch pollen allergy. Bet v 1 produced by the LAB was recognized by monoclonal anti-Bet v 1 and IgE antibodies from birch pollen-allergic patients. Systemic immunization with the recombinant strains induced significantly lower IgG1/IgG2a ratios compared with purified Bet v 1. Intranasal pretreatment led to reduced allergen-specific IgE vs enhanced IgG2a levels and reduced interleukin (IL)-5 production of splenocytes in vitro, indicating a shift towards non-allergic T-helper-1 (Th1) responses. Airway inflammation, i.e. eosinophils and IL-5 in lung lavages, was reduced using either Bet v 1-producing or control strains. Allergen-specific secretory IgA responses were enhanced in lungs and intestines after pretreatment with only the Bet v 1-producing strains. Mucosal vaccination with live recombinant LAB, leading to a shift towards non-allergic immune responses along with enhanced allergen-specific mucosal IgA levels offers a promising approach to prevent systemic and local allergic immune responses.

  20. Effects of sample drying and storage, and choice of extraction solvent and analysis method on the yield of birch leaf hydrolyzable tannins.

    Science.gov (United States)

    Salminen, Juha-Pekka

    2003-06-01

    In this study, I investigated the effects of different methods of sample drying and storage, and the choice of extraction solvent and analysis method on the concentrations of 14 individual hydrolyzable tannins (HTs), and insoluble ellagitannins in birch (Betula pubescens) leaves. Freeze- and vacuum-drying of birch leaves were found to provide more reliable results than air- or oven-drying. Storage of leaves at -20 degrees C for 3 months before freeze-drying did not cause major changes in tannin content, although levels of 1,2,3,4,6-penta-O-galloylglucose and isostrictinin were altered. Storage of dried leaf material at -20 degrees C is preferred because 1 year storage of freeze-dried leaves at 4 degrees C and at room temperature decreased the concentration of the pedunculagin derivative, one of the main ellagitannins of birch. Furthermore, storage at room temperature increased the levels of isostrictinin and 2,3-(S)-HHDP-glucose, indicating possible HT catabolism. Of the extraction solvents tested, aqueous acetone was superior to pure acetone, or aqueous or pure methanol. The addition of 0.1% ascorbic acid into 70% acetone significantly increased the yield of ellagitannins. presumably by preventing their oxidation. By comparing the conventional rhodanine assay and the HPLC-ESI-MS assay for quantification of leaf galloylglucoses, the former tends to underestimate total concentrations of galloylglucoses in birch leaf extract. On the basis of the outcomes of all the method and solvent comparisons, their suitability for qualitative and quantitative analysis of plant HTs is discussed, emphasizing that each plant species, with its presumably unique HT composition, is likely to have a unique combination of ideal conditions for tissue preservation and extraction.

  1. Introduction to parallel algorithms and architectures arrays, trees, hypercubes

    CERN Document Server

    Leighton, F Thomson

    1991-01-01

    Introduction to Parallel Algorithms and Architectures: Arrays Trees Hypercubes provides an introduction to the expanding field of parallel algorithms and architectures. This book focuses on parallel computation involving the most popular network architectures, namely, arrays, trees, hypercubes, and some closely related networks.Organized into three chapters, this book begins with an overview of the simplest architectures of arrays and trees. This text then presents the structures and relationships between the dominant network architectures, as well as the most efficient parallel algorithms for

  2. Response of a forest ecotone to ionizing radiation. Progress report, October 15, 1979-October 14, 1980

    International Nuclear Information System (INIS)

    Murphy, P.G.; Sharitz, R.R.

    1980-07-01

    Compositional and structural characteristics of three forest types, including aspen dominated, maple-birch dominated, and an intervening ecotone, were studied before and after irradiation in northern Wisconsin. Irradiation occurred during the summer of 1972. By the summer of 1973 the density of viable tree seedlings at 10 m from the radiation source was substantially reduced in all three areas relative to the preirradiation densities of 1971. As of the summer of 1979, establishment of tree seedlings continued to be inhibited by the vigorous development of ground vegetation. In most respects, the ecotone has shown properties and responses to radiation intermediate to those observed in the aspen and maple-birch areas. The rate and compositional characteristics of succession in the ecotone relative to aspen and maple-birch forest types is presently under study

  3. Comparative toxic effects of some xenobiotics on the germination and early seedling growth of jack pine (Pinus banksiana Lamb. ) and white birch (Betula papyrifera Marsh. )

    Energy Technology Data Exchange (ETDEWEB)

    Weinberger, P; Vladut, R

    1981-12-01

    Seeds of jack pine (Pinus banksiana Lamb.) and white birch (Betula papyrifera Marsh.) were germinated in homogeneous emulsions or aqueous tank-mix solutions of fenitrothion or Matacil and their respective adjuvants: Atlox and Aerotex, or diluent oil No. 585 and nonylphenol. Percentage and peak germination values, water uptake, sprout length, ATP content, and morphological modifications were recorded from 0 to 14 or 21 days. Apart from 100 ppm fenitrothion which stimulated germination values, germination in jack pine was only marginally affected by any of the treatments; in contrast, white birch was negatively affected by all treatments. The most sensitive parameters of toxicity were the sprout length and ATP content after 14 days growth. Aberrant hypocotyl/root length ratios were evidenced in pine seeds after exposure to xenobiotic treatments which did not affect the germinative capacity of seeds. ATP content in the 14-day-old pine and birch seedlings was consistently higher than controls in all treatment sets. (Refs. 29).

  4. Estimating the spread rate of urea formaldehyde adhesive on birch (Betula pendula Roth) veneer using fluorescence

    Science.gov (United States)

    Toni Antikainen; Anti Rohumaa; Christopher G. Hunt; Mari Levirinne; Mark Hughes

    2015-01-01

    In plywood production, human operators find it difficult to precisely monitor the spread rate of adhesive in real-time. In this study, macroscopic fluorescence was used to estimate spread rate (SR) of urea formaldehyde adhesive on birch (Betula pendula Roth) veneer. This method could be an option when developing automated real-time SR measurement for...

  5. Impact of ectohumus application in birch and pine nurseries on the presence of soil mites (Acari, Oribatida in particular

    Directory of Open Access Journals (Sweden)

    Klimek Andrzej

    2016-03-01

    Full Text Available Intensively used forest nurseries are characterised by degradation processes that lead to a drop in the quality of seedlings. The main reason of this problem is a decrease in biological soil diversity. Therefore, an attempt of nursery soil enrichment by introducing ectohumus – as compost and fresh litter – from the pine forest was carried out. The research was carried out in 2009–2011 in the Bielawy forest nursery near the city of Toruń, Poland. The objective of the study was to determine the impact of organic fertilisation (compost made up of forest humus and mulching using fresh ectohumus on the density and community composition of Acari mites and on species composition of oribatid mites (Oribatida in the nurseries of silver birch and Scots pine. Mites, especially oribatid mites, were treated as bioindicators of soil biological activity. Research has shown that mulching using fresh ectohumus caused a multiple increase in the density of mites, especially in saprophagous mites Oribatida. Oribatid mites were clearly more numerous in birch cultivation than in that of pine. Overall, 27 species of oribatid mites were found. Mulching resulted in a significant growth in species diversity in both cultivations. The most numerous oribatid mite in the area under the study was Oribatula tibialis. This species was present in all plots and showed clear preference for birch cultivation. Tectocepheus velatus and Oppiella nova, common and known to be present in a variety of environments, were slightly less numerous.

  6. Effects of stream water chemistry and tree species on release and methylation of mercury during litter decomposition.

    Science.gov (United States)

    Tsui, Martin Tsz Ki; Finlay, Jacques C; Nater, Edward A

    2008-12-01

    Foliage of terrestrial plants provides an important energy and nutrient source to aquatic ecosystems but also represents a potential source of contaminants, such as mercury (Hg). In this study, we examined how different stream water types and terrestrial tree species influenced the release of Hg from senesced litter to the water and its subsequent methylation during hypoxic litter decomposition. After laboratory incubations of maple leaf litter for 66 days, we observed 10-fold differences in dissolved Hg (DHg, tree species collected at the same site and incubated with the same source water, litter from slower decomposing species (e.g., cedar and pine) yielded higher DHg concentrations than those with more labile carbon (e.g., maple and birch). Percent MeHg, however, was relatively similar among different leaf species (i.e., 61-86%). Our study is the first to demonstrate that stream water chemistry and terrestrial plant litter characteristics are important factors determining Hg release and methylation during hypoxic litter decomposition. These results suggest that certain watershed and aquatic ecosystem properties can determine the levels of MeHg inputs during litterfall events.

  7. Are There Infinite Irrigation Trees?

    Science.gov (United States)

    Bernot, M.; Caselles, V.; Morel, J. M.

    2006-08-01

    In many natural or artificial flow systems, a fluid flow network succeeds in irrigating every point of a volume from a source. Examples are the blood vessels, the bronchial tree and many irrigation and draining systems. Such systems have raised recently a lot of interest and some attempts have been made to formalize their description, as a finite tree of tubes, and their scaling laws [25], [26]. In contrast, several mathematical models [5], [22], [10], propose an idealization of these irrigation trees, where a countable set of tubes irrigates any point of a volume with positive Lebesgue measure. There is no geometric obstruction to this infinitesimal model and general existence and structure theorems have been proved. As we show, there may instead be an energetic obstruction. Under Poiseuille law R(s) = s -2 for the resistance of tubes with section s, the dissipated power of a volume irrigating tree cannot be finite. In other terms, infinite irrigation trees seem to be impossible from the fluid mechanics viewpoint. This also implies that the usual principle analysis performed for the biological models needs not to impose a minimal size for the tubes of an irrigating tree; the existence of the minimal size can be proven from the only two obvious conditions for such irrigation trees, namely the Kirchhoff and Poiseuille laws.

  8. Investigation of survival rate of trees planted in agroforestry and ...

    African Journals Online (AJOL)

    Low survival rate of trees planted during annual planting campaigns is often reported in many parts of the country and there is need to understand why and propose adequate solutions to improve survival rate of trees in plantation. The study was conducted in three sectors of Huye District namely Mukura, Tumba and Ngoma ...

  9. Northward migrating trees establish in treefall gaps at the northern limit of the temperate-boreal ecotone, Ontario, Canada.

    Science.gov (United States)

    Leithead, Mark D; Anand, Madhur; Silva, Lucas C R

    2010-12-01

    Climate change is expected to promote migration of species. In ecotones, areas of ecological tension, disturbances may provide opportunities for some migrating species to establish in otherwise competitive environments. The size of and time since disturbance may determine the establishment ability of these species. We investigated gap dynamics of an old-growth red pine (Pinus resinosa Sol. ex Aiton) forest in the Great Lakes-St. Lawrence forest in northern Ontario, Canada, a transition zone between temperate and boreal forest. We investigated the effects of gaps of different sizes and ages on tree species abundance and basal area. Our results show that tree species from the temperate forest further south, such as red maple (Acer rubrum L.), red oak (Quercus rubra L.), and white pine (Pinus strobus L.), establish more often in large, old gaps; however, tree species that have more northern distributions, such as black spruce (Picea mariana Mill.), paper birch (Betula papyrifera Marsh.), and red pine show no difference in establishment ability with gap size or age. These differences in composition could not be attributed to autogenic succession. We conclude that treefall gaps in this forest facilitate the establishment of northward migrating species, potentially providing a pathway for future forest migration in response to recent changes in climate.

  10. Analyzing tree cores to detect petroleum hydrocarbon-contaminated groundwater at a former landfill site in the community of Happy Valley-Goose Bay, eastern Canadian subarctic.

    Science.gov (United States)

    Fonkwe, Merline L D; Trapp, Stefan

    2016-08-01

    This research examines the feasibility of analyzing tree cores to detect benzene, toluene, ethylbenzene, and m, p, o-xylene (BTEX) compounds and methyl tertiary-butyl ether (MTBE) in groundwater in eastern Canada subarctic environments, using a former landfill site in the remote community of Happy Valley-Goose Bay, Labrador. Petroleum hydrocarbon contamination at the landfill site is the result of environmentally unsound pre-1990s disposal of households and industrial solid wastes. Tree cores were taken from trembling aspen, black spruce, and white birch and analyzed by headspace-gas chromatography-mass spectrometry. BTEX compounds were detected in tree cores, corroborating known groundwater contamination. A zone of anomalously high concentrations of total BTEX constituents was identified and recommended for monitoring by groundwater wells. Tree cores collected outside the landfill site at a local control area suggest the migration of contaminants off-site. Tree species exhibit different concentrations of BTEX constituents, indicating selective uptake and accumulation. Toluene in wood exhibited the highest concentrations, which may also be due to endogenous production. Meanwhile, MTBE was not found in the tree cores and is considered to be absent in the groundwater. The results demonstrate that tree-core analysis can be useful for detecting anomalous concentrations of petroleum hydrocarbons, such as BTEX compounds, in subarctic sites with shallow unconfined aquifers and permeable soils. This method can therefore aid in the proper management of contamination during landfill operations and after site closures.

  11. A Minimum Spanning Tree Representation of Anime Similarities

    OpenAIRE

    Wibowo, Canggih Puspo

    2016-01-01

    In this work, a new way to represent Japanese animation (anime) is presented. We applied a minimum spanning tree to show the relation between anime. The distance between anime is calculated through three similarity measurements, namely crew, score histogram, and topic similarities. Finally, the centralities are also computed to reveal the most significance anime. The result shows that the minimum spanning tree can be used to determine the similarity anime. Furthermore, by using centralities c...

  12. Assessment of hydrology, water quality, and trace elements in selected placer-mined creeks in the birch creek watershed near central, Alaska, 2001-05

    Science.gov (United States)

    Kennedy, Ben W.; Langley, Dustin E.

    2007-01-01

    Executive Summary The U.S. Geological Survey, in cooperation with the Bureau of Land Management, completed an assessment of hydrology, water quality, and trace-element concentrations in streambed sediment of the upper Birch Creek watershed near Central, Alaska. The assessment covered one site on upper Birch Creek and paired sites, upstream and downstream from mined areas, on Frying Pan Creek and Harrison Creek. Stream-discharge and suspended-sediment concentration data collected at other selected mined and unmined sites helped characterize conditions in the upper Birch Creek watershed. The purpose of the project was to provide the Bureau of Land Management with baseline information to evaluate watershed water quality and plan reclamation efforts. Data collection began in September 2001 and ended in September 2005. There were substantial geomorphic disturbances in the stream channel and flood plain along several miles of Harrison Creek. Placer mining has physically altered the natural stream channel morphology and removed streamside vegetation. There has been little or no effort to re-contour waste rock piles. During high-flow events, the abandoned placer-mine areas on Harrison Creek will likely contribute large quantities of sediment downstream unless the mined areas are reclaimed. During 2004 and 2005, no substantial changes in nutrient or major-ion concentrations were detected in water samples collected upstream from mined areas compared with water samples collected downstream from mined areas on Frying Pan Creek and Harrison Creek that could not be attributed to natural variation. This also was true for dissolved oxygen, pH, and specific conductance-a measure of total dissolved solids. Sample sites downstream from mined areas on Harrison Creek and Frying Pan Creek had higher median suspended-sediment concentrations, by a few milligrams per liter, than respective upstream sites. However, it is difficult to attach much importance to the small downstream increase

  13. The knowledge of Bengkulu University’s forestry students of tree diversity in their campus

    Directory of Open Access Journals (Sweden)

    STEFFANIE NURLIANA

    2011-07-01

    Full Text Available Abstract. Wiryono, Nurliana S. 2011. The knowledge of Bengkulu University’s forestry students of tree diversity in their campus. Nusantara Bioscience 3: 98-103. Indonesia is rich in plant diversity which has provided daily human needs for millennia. Knowledge of diverse plants and their uses is part of ecological knowledge essential for the survival of human. However, rapid deforestation has reduced plant diversity and caused the loss of traditional ecological knowledge. Furthermore, the increased availability of electronic entertainment has alienated young people from nature, causing further loss of ecological knowledge. The objective of this study was to know the ability of Bengkulu University’s forestry students to identify trees growing in the campus by local names and their genera. Knowing the name of trees growing in our environment is an indicator of concern for biodiversity. Results showed that forestry students had low ability to identify trees by local names and even lower by genera. Second-semester students could identify fewer trees than the higher-semester students, and the knowledge was not affected by student’s gender or profession of students’ parents. This low appreciation of plant diversity among young generation will have negative implication for biodiversity conservation efforts. Students should be brought closer to nature by increasing outdoor education.

  14. Thermal analysis of wood of the main tree species of Central Siberia

    Directory of Open Access Journals (Sweden)

    S. R. Loskutov

    2015-12-01

    Full Text Available Thermal decomposition of wood from coniferous and deciduous species of Siberia has been studied using thermogravimetry (TG and differential scanning calorimetry (DSC. The tree species were larch Larix sibirica Ledeb., Scots pine Pinus sylvestris L., spruce Picea obovata Ledeb., fir Abies sibirica Ledeb., Siberian pine Pinus sibirica Du Tour., birch Betula pendula Roth., and aspen Populus tremula L. Thermal analysis of wood samples was carried out under oxidative (air and inert (argon atmospheres from 25 to 700 °С at heating rates 10, 20, 40 °С • min–1 (TG/DTG and from 25 to 590 °С at heating rates 10, 40 °С • min–1 (DSC. The stages of thermal decomposition, the temperature intervals, the mass loss, the mass loss rate, the temperature of DTG/DSC peaks, and heating effects were determined for each tree species. The kinetic thermal degradation parameters of wood were obtained by the Broido and Ozawa–Flynn–Wall models. The wood of coniferous and deciduous species of Siberia was characterized on the base of analysis of activation energy values at various stages of thermal decomposition and the relations of activation energy on conversion level of wood substance of different tree species, and also the comparison of mass loss at the same stages of thermal destruction, heating effects, residual mass and other parameters of TG/DTG, DSC. In our opinion, the results of this work present interest for researchers and specialists in the field of forest pyrology, wood science, dendrochemistry.

  15. Alaska Is Our Home--Book 3: A Natural Science Handbook for Alaskan Students.

    Science.gov (United States)

    Bury, John; Bury, Susan

    The third book in a series of natural science handbooks for Alaskan students focuses on Alaskan plantlife. The first chapter, on trees, gives general information about trees and explains how to identify and locate trees in the three main Alaskan tree families: pine, willow, and birch. The second chapter, on plants, describes 14 kinds of edible…

  16. Are temperate canopy spiders tree-species specific?

    Science.gov (United States)

    Mupepele, Anne-Christine; Müller, Tobias; Dittrich, Marcus; Floren, Andreas

    2014-01-01

    Arboreal spiders in deciduous and coniferous trees were investigated on their distribution and diversity. Insecticidal knock-down was used to comprehensively sample spiders from 175 trees from 2001 to 2003 in the Białowieża forest and three remote forests in Poland. We identified 140 species from 9273 adult spiders. Spider communities were distinguished between deciduous and coniferous trees. The richest fauna was collected from Quercus where beta diversity was also highest. A tree-species-specific pattern was clearly observed for Alnus, Carpinus, Picea and Pinus trees and also for those tree species that were fogged in only four or three replicates, namely Betula and Populus. This hitherto unrecognised association was mainly due to the community composition of common species identified in a Dufrene-Legendre indicator species analysis. It was not caused by spatial or temporal autocorrelation. Explaining tree-species specificity for generalist predators like spiders is difficult and has to involve physical and ecological tree parameters like linkage with the abundance of prey species. However, neither did we find a consistent correlation of prey group abundances with spiders nor could differences in spider guild composition explain the observed pattern. Our results hint towards the importance of deterministic mechanisms structuring communities of generalist canopy spiders although the casual relationship is not yet understood.

  17. Isoprene emission from Indian trees

    Science.gov (United States)

    Varshney, C. K.; Singh, Abhai Pratap

    2003-12-01

    Isoprene is the most dominant non-methane volatile organic compound (NMVOC) emitted by plants. NMVOCs play an important role in regulating the composition of atmospheric trace gases including global concentration of tropospheric ozone. Our present knowledge about NMVOCs emission is mainly from studies on temperate tree species. So far information on biogenic NMVOCs emission from tropical tree species is limited. In this study, isoprene emission rates from 40 tropical Indian tree species belonging to 33 genera and 17 families were measured for the first time using a dynamic flow through enclosure chamber technique. The isoprene emission rate from plants (30°C and PAR 1000 μmolm-2s-1) ranged from undetectable to 81.5 μg g-1 h-1 and values were found to be comparable with other studies on tropical tree species. Tree species screened for isoprene emission in the present study may be grouped into the four categories, proposed by [2001], namely, 18 species were negligible or BDL isoprene emitting (Morus alba Linn., which were earlier reported as BDL or non isoprene emitters in US [, 1998; , 2001] were found to be appreciably high isoprene emitters (0.61-21.60 μg g-1 h-1) in the present study.

  18. Insufficient Chilling Effects Vary among Boreal Tree Species and Chilling Duration

    Directory of Open Access Journals (Sweden)

    Rongzhou Man

    2017-08-01

    Full Text Available Insufficient chilling resulting from rising winter temperatures associated with climate warming has been an area of particular interest in boreal and temperate regions where a period of cool temperatures in fall and winter is required to break plant dormancy. In this study, we examined the budburst and growth of trembling aspen (Populus tremuloides Michx., balsam poplar (Populus balsamifera L., white birch (Betula papyrifera Marsh., black spruce (Picea mariana (Mill. B.S.P., white spruce (Picea glauca (Moench Voss, jack pine (Pinus banksiana Lamb., and lodgepole pine (Pinus contorta Dougl. ex. Loud. seedlings subjected to typical northern Ontario, Canada, spring conditions in climate chambers after different exposures to natural chilling. Results indicate that chilling requirements (cumulative weighted chilling hours differed substantially among the seven species, ranging from 300 to 500 h for spruce seedlings to more than 1100 h for trembling aspen and lodgepole pine. Only spruce seedlings had fulfilled their chilling requirements before December 31, whereas the other species continued chilling well into March and April. Species with lower chilling requirements needed more heat accumulation for budburst and vice versa. Insufficient chilling delayed budburst but only extremely restricted chilling hours (<400 resulted in abnormal budburst and growth, including reduced needle and shoot expansion, early budburst in lower crowns, and erratic budburst on lower stems and roots. Effects, however, depended on both the species’ chilling requirements and the chilling–heat relationship. Among the seven tree species examined, trembling aspen is most likely to be affected by reduced chilling accumulation possible under future climate scenarios, followed by balsam poplar, white birch, lodgepole pine, and jack pine. Black and white spruce are least likely to be affected by changes in chilling hours.

  19. An overview of decision tree applied to power systems

    DEFF Research Database (Denmark)

    Liu, Leo; Rather, Zakir Hussain; Chen, Zhe

    2013-01-01

    The corrosive volume of available data in electric power systems motivate the adoption of data mining techniques in the emerging field of power system data analytics. The mainstream of data mining algorithm applied to power system, Decision Tree (DT), also named as Classification And Regression...... Tree (CART), has gained increasing interests because of its high performance in terms of computational efficiency, uncertainty manageability, and interpretability. This paper presents an overview of a variety of DT applications to power systems for better interfacing of power systems with data...... analytics. The fundamental knowledge of CART algorithm is also introduced which is then followed by examples of both classification tree and regression tree with the help of case study for security assessment of Danish power system....

  20. Damage of the forest tree layer exposed to the acute gamma- irradiation in different phenophases

    International Nuclear Information System (INIS)

    Karaban', R.T.; Mishenkov, N.N.; Spirin, D.A.; Prister, B.S.; Aleksakhin, R.M.

    1980-01-01

    A programme of radioecological investigations using a specially designed powerful accurate source of gamma radiation (32 kCi 137 Cs) has been initiated in our country to study the consequences of the acute forest irradiation. The irradiation has been carried out twice - in autumn (September, 1973) and in spring (May, 1977). Pine and birch sections of the forest 26-30 years old have been subjected to irradiation. Exposures during autumn and spring irradiation constitute 16 and 8 days, respectively. Forest irradiation has been carried out so as to form isodose sections of considerable square to have a sufficient amount of tress in every isodose section. Pine-trees that perished due to the effect of ionizing radiation have been counted. Presented are the data on pine trees that perished depending on the dose absorbed and new pine shoots one year old (shoots of 1978) depending on the dose in the second year after spring irradiation. The data on the damage of shoots and buds used as the indices of pine radiation damage have been used to forecast that LD 100 for the period of acute effects (4-5 years) in the case of spring irradiation is approximately 1.5-2 krad, i.e. the spring effect on pine trees is 2-2.7 times more radiosensitive, than in autumn. The supposition is made that doses absorbed (about 1-2 krad) are minimum lethal doses for coniferous forests when irradiating them in most radiosensitive phases

  1. Combined effects of environmental disturbance and climate warming on insect herbivory in mountain birch in subarctic forests: Results of 26-year monitoring.

    Science.gov (United States)

    Kozlov, M V; Zverev, V; Zvereva, E L

    2017-12-01

    Both pollution and climate affect insect-plant interactions, but the combined effects of these two abiotic drivers of global change on insect herbivory remain almost unexplored. From 1991 to 2016, we monitored the population densities of 25 species or species groups of insects feeding on mountain birch (Betula pubescens ssp. czerepanovii) in 29 sites and recorded leaf damage by insects in 21 sites in subarctic forests around the nickel-copper smelter at Monchegorsk, north-western Russia. The leaf-eating insects demonstrated variable, and sometimes opposite, responses to pollution-induced forest disturbance and to climate variations. Consequently, we did not discover any general trend in herbivory along the disturbance gradient. Densities of eight species/species groups correlated with environmental disturbance, but these correlations weakened from 1991 to 2016, presumably due to the fivefold decrease in emissions of sulphur dioxide and heavy metals from the smelter. The densities of externally feeding defoliators decreased from 1991 to 2016 and the densities of leafminers increased, while the leaf roller densities remained unchanged. Consequently, no overall temporal trend in the abundance of birch-feeding insects emerged despite a 2-3°C elevation in spring temperatures. Damage to birch leaves by insects decreased during the observation period in heavily disturbed forests, did not change in moderately disturbed forests and tended to increase in pristine forests. The temporal stability of insect-plant interactions, quantified by the inverse of the coefficient of among-year variations of herbivore population densities and of birch foliar damage, showed a negative correlation with forest disturbance. We conclude that climate differently affects insect herbivory in heavily stressed versus pristine forests, and that herbivorous insects demonstrate diverse responses to environmental disturbance and climate variations. This diversity of responses, in combination with the

  2. Shotgun Bisulfite Sequencing of the Betula platyphylla Genome Reveals the Tree’s DNA Methylation Patterning

    Directory of Open Access Journals (Sweden)

    Chang Su

    2014-12-01

    Full Text Available DNA methylation plays a critical role in the regulation of gene expression. Most studies of DNA methylation have been performed in herbaceous plants, and little is known about the methylation patterns in tree genomes. In the present study, we generated a map of methylated cytosines at single base pair resolution for Betula platyphylla (white birch by bisulfite sequencing combined with transcriptomics to analyze DNA methylation and its effects on gene expression. We obtained a detailed view of the function of DNA methylation sequence composition and distribution in the genome of B. platyphylla. There are 34,460 genes in the whole genome of birch, and 31,297 genes are methylated. Conservatively, we estimated that 14.29% of genomic cytosines are methylcytosines in birch. Among the methylation sites, the CHH context accounts for 48.86%, and is the largest proportion. Combined transcriptome and methylation analysis showed that the genes with moderate methylation levels had higher expression levels than genes with high and low methylation. In addition, methylated genes are highly enriched for the GO subcategories of binding activities, catalytic activities, cellular processes, response to stimulus and cell death, suggesting that methylation mediates these pathways in birch trees.

  3. How does solar ultraviolet-B radiation improve drought tolerance of silver birch (Betula pendula Roth.) seedlings?

    Science.gov (United States)

    Robson, T Matthew; Hartikainen, Saara M; Aphalo, Pedro J

    2015-05-01

    We hypothesized that solar ultraviolet (UV) radiation would protect silver birch seedlings from the detrimental effects of water stress through a coordinated suite of trait responses, including morphological acclimation, improved control of water loss through gas exchange and hydraulic sufficiency. To better understand how this synergetic interaction works, plants were grown in an experiment under nine treatment combinations attenuating ultraviolet-A and ultraviolet-B (UVB) from solar radiation together with differential watering to create water-deficit conditions. In seedlings under water deficit, UV attenuation reduced height growth, leaf production and leaf length compared with seedlings receiving the full spectrum of solar radiation, whereas the growth and morphology of well-watered seedlings was largely unaffected by UV attenuation. There was an interactive effect of the treatment combination on water relations, which was more apparent as a change in the water potential at which leaves wilted or plants died than through differences in gas exchange. This suggests that changes occur in the cell wall elastic modulus or accumulation of osmolites in cells under UVB. Overall, the strong negative effects of water deficit are partially ameliorated by solar UV radiation, whereas well-watered silver birch seedlings are slightly disadvantaged by the solar UV radiation they receive. © 2014 John Wiley & Sons Ltd.

  4. Pollen-Associated Microbiome Correlates with Pollution Parameters and the Allergenicity of Pollen.

    Directory of Open Access Journals (Sweden)

    Andrea Obersteiner

    Full Text Available Pollen allergies have been rapidly increasing over the last decades. Many allergenic proteins and non-allergenic adjuvant compounds of pollen are involved in the plant defense against environmental or microbial stress. The first aim of this study was to analyze and compare the colonizing microbes on allergenic pollen. The second aim was to investigate detectable correlations between pollen microbiota and parameters of air pollution or pollen allergenicity. To reach these aims, bacterial and fungal DNA was isolated from pollen samples of timothy grass (Phleum pratense, n = 20 and birch trees (Betula pendula, n = 55. With this isolated DNA, a terminal restriction fragment length polymorphism analysis was performed. One result was that the microbial diversity on birch tree and timothy grass pollen samples (Shannon/Simpson diversity indices was partly significantly correlated to allergenicity parameters (Bet v 1/Phl p 5, pollen-associated lipid mediators. Furthermore, the microbial diversity on birch pollen samples was correlated to on-site air pollution (nitrogen dioxide (NO2, ammonia (NH3, and ozone (O3. What is more, a significant negative correlation was observed between the microbial diversity on birch pollen and the measured NO2 concentrations on the corresponding trees. Our results showed that the microbial composition of pollen was correlated to environmental exposure parameters alongside with a differential expression of allergen and pollen-associated lipid mediators. This might translate into altered allergenicity of pollen due to environmental and microbial stress.

  5. Some strong limit theorems for nonhomogeneous Markov chains indexed by controlled trees

    Directory of Open Access Journals (Sweden)

    Weicai Peng

    2016-02-01

    Full Text Available Abstract In this paper, a kind of infinite, local finite tree T, named a controlled tree, is introduced. Some strong limit properties, such as the strong law of large numbers and the asymptotic equipartition property, for nonhomogeneous Markov chains indexed by T, are established. The outcomes are the generalizations of some well-known results.

  6. An idealized model for tree-grass coexistence in savannas : The role of life stage structure and fire disturbances

    NARCIS (Netherlands)

    Baudena, Mara|info:eu-repo/dai/nl/340303867; D'Andrea, Fabio; Provenzale, A.

    2010-01-01

    1. We discuss a simple implicit-space model for the competition of trees and grasses in an idealized savanna environment. The model represents patch occupancy dynamics within the habitat and introduces life stage structure in the tree population, namely adults and seedlings. A tree can be

  7. Perinatal maternal administration of Lactobacillus paracasei NCC 2461 prevents allergic inflammation in a mouse model of birch pollen allergy.

    Directory of Open Access Journals (Sweden)

    Irma Schabussova

    Full Text Available BACKGROUND: The hygiene hypothesis implies that microbial agents including probiotic bacteria may modulate foetal/neonatal immune programming and hence offer effective strategies for primary allergy prevention; however their mechanisms of action are poorly understood. We investigated whether oral administration of Lactobacillus paracasei NCC 2461 to mothers during gestation/lactation can protect against airway inflammation in offspring in a mouse model of birch pollen allergy, and examined the immune mechanisms involved. METHODS: BALB/c mice were treated daily with L. paracasei in drinking water or drinking water alone in the last week of gestation and during lactation. Their offspring were sensitized with recombinant Bet v 1, followed by aerosol challenge with birch pollen extract. RESULTS: Maternal exposure to L. paracasei prevented the development of airway inflammation in offspring, as demonstrated by attenuation of eosinophil influx in the lungs; reduction of IL-5 levels in bronchoalveolar lavage, and in lung and mediastinal lymph node cell cultures; and reduced peribronchial inflammatory infiltrate and mucus hypersecretion. While allergen-specific IgE and IgG antibody levels remained unchanged by the treatment, IL-4 and IL-5 production in spleen cell cultures were significantly reduced upon allergen stimulation in offspring of L. paracasei treated mice. Offspring of L. paracasei supplemented mothers had significantly reduced Bet v 1-specific as well as Concanavalin A-induced responses in spleen and mesenteric lymph node cell cultures, suggesting the modulation of both antigen-specific and mitogen-induced immune responses in offspring. These effects were associated with increased Foxp3 mRNA expression in the lungs and increased TGF-beta in serum. CONCLUSION: Our data show that in a mouse model of birch pollen allergy, perinatal administration of L. paracasei NCC 2461 to pregnant/lactating mothers protects against the development of airway

  8. The influence of lathe check depth and orientation on the bond quality of phenol-formaldehyde-bonded birch plywood

    Science.gov (United States)

    Anti Rohumaa; Christopher G. Hunt; Mark Hughes; Charles R. Frihart; Janne Logren

    2013-01-01

    During the rotary peeling of veneer for plywood or the laminated veneer lumber manufacture, checks are formed in the veneer that are as deep as 70 – 80 % of the veneer thickness. The results of this study show that, during adhesive bond testing, deep lathe checks in birch (Betula pendula Roth.) veneer significantly reduce the shear strength and the...

  9. The influence of log soaking temperature on surface quality and integrity performance of birch (Betula pendula Roth) veneer

    Science.gov (United States)

    Anti Rohumaa; Toni Antikainen; Christopher G. Hunt; Charles R. Frihart; Mark Hughes

    2016-01-01

    Wood material surface properties play an important role in adhesive bond formation and performance. In the present study, a test method was developed to evaluate the integrity of the wood surface, and the results were used to understand bond performance. Materials used were rotary cut birch (Betula pendula Roth) veneers, produced from logs soaked at 20 or 70 °C prior...

  10. EEG feature selection method based on decision tree.

    Science.gov (United States)

    Duan, Lijuan; Ge, Hui; Ma, Wei; Miao, Jun

    2015-01-01

    This paper aims to solve automated feature selection problem in brain computer interface (BCI). In order to automate feature selection process, we proposed a novel EEG feature selection method based on decision tree (DT). During the electroencephalogram (EEG) signal processing, a feature extraction method based on principle component analysis (PCA) was used, and the selection process based on decision tree was performed by searching the feature space and automatically selecting optimal features. Considering that EEG signals are a series of non-linear signals, a generalized linear classifier named support vector machine (SVM) was chosen. In order to test the validity of the proposed method, we applied the EEG feature selection method based on decision tree to BCI Competition II datasets Ia, and the experiment showed encouraging results.

  11. Name agreement in picture naming : An ERP study

    NARCIS (Netherlands)

    Cheng, Xiaorong; Schafer, Graham; Akyürek, Elkan G.

    Name agreement is the extent to which different people agree on a name for a particular picture. Previous studies have found that it takes longer to name low name agreement pictures than high name agreement pictures. To examine the effect of name agreement in the online process of picture naming, we

  12. Isolation of suberin from birch outer bark and cork using ionic liquids: A new source of macromonomers

    OpenAIRE

    Ferreira, Rui; Garcia, Helga; Sousa, Andreia F.; Freire, Carmen S. R.; Silvestre, Armando J. D.; Rebelo, Luis Paulo N.; Pereira, Cristina Silva

    2013-01-01

    Cholinium hexanoate, a biocompatible and biodegradable ionic liquid, was recently demonstrated to efficiently and selectively extract suberin domains from cork, combining high extraction efficiency with isolation of a partial depolymerised material. In the present paper, we report a comparative study of the characterisation of suberin extracted from birch outer bark and from cork using cholinium hexanoate. It became apparent that both extracted suberin samples showed still a cross-linked natu...

  13. On flora semantics in house names found in Vidzeme: materials contained in the 1826 counting of souls in Vidzeme province

    Directory of Open Access Journals (Sweden)

    Ilga Jansone

    2014-12-01

    Full Text Available On flora semantics in house names found in Vidzeme: materials contained in the 1826 counting of souls in Vidzeme province The information of the counting of souls containing both house names and names of individuals is an essential aspect of historical onomastics. The first counting of souls in Vidzeme took place in 1782 and coincided with the 4th analogous census of the provinces of Russia. Subsequently these took place at irregular intervals, the 5th in 1795, the 6th in 1811, the 7th in 1816, the 8th in 1834, the 9th in 1850, and the final, 10th in 1858. The number of house names entered in the 1826 counting of souls in Vidzeme province (guberna is 14,500, including those of peasant homes that had been separated from another property whilst retaining the same name. House names based on flora (incl. names of mushrooms semantics are listed for 574 dwellings, which represent just about 4% of all house names listed for Vidzeme, providing that repeated house names are counted separately. In case of several manors data is missing (lost for the 1826 census, information for these manors is taken from previous and subsequent censuses. In many instances (279 cases registered house names were based on the names of deciduous trees found in their immediate vicinity: such names comprise 48.6% of all house names of flora semantic origin, i. e., ozols ‘oak-tree’, bērzs ‘birch-tree’, kārkls ‘osier’, liepa ‘linden tree’, kļava ‘maple tree’, apses ‘aspen’, osis ‘ash tree’, alksnis ‘alder’, lazda ‘hazel-tree’, vītols ‘willow’, ieva ‘bird cherry’. Names based on names of conifers are found (35 instances were recorded, or 6.1% of all house names based on flora semantics, i. e., egle ‘spruce tree’, paeglis, kadiķis ‘juniper’, priede ‘pine-tree’. House names based on names of fruit trees and bushes are only occasionally found in Vidzeme, with 8 recorded instances, or 1.4% of all house names based on flora

  14. A family of names : rune-names and ogam-names and their relation to alphabet letter-names

    NARCIS (Netherlands)

    Griffiths, Alan

    2013-01-01

    The current consensus is that vernacular names assigned to the runes of the Germanic fuþark and to Irish ogam characters are indigenous creations independent of Mediterranean alphabet traditions. I propose, however, that ogam-names are based on interpretations of Hebrew, Greek or Latin letter-names

  15. An effective XML based name mapping mechanism within StoRM

    International Nuclear Information System (INIS)

    Corso, E; Forti, A; Ghiselli, A; Magnoni, L; Zappi, R

    2008-01-01

    In a Grid environment the naming capability allows users to refer to specific data resources in a physical storage system using a high level logical identifier. This logical identifier is typically organized in a file system like structure, a hierarchical tree of names. Storage Resource Manager (SRM) services map the logical identifier to the physical location of data evaluating a set of parameters as the desired quality of services and the VOMS attributes specified in the requests. StoRM is a SRM service developed by INFN and ICTP-EGRID to manage file and space on standard POSIX and high performing parallel and cluster file systems. An upcoming requirement in the Grid data scenario is the orthogonality of the logical name and the physical location of data, in order to refer, with the same identifier, to different copies of data archived in various storage areas with different quality of service. The mapping mechanism proposed in StoRM is based on a XML document that represents the different storage components managed by the service, the storage areas defined by the site administrator, the quality of service they provide and the Virtual Organization that want to use the storage area. An appropriate directory tree is realized in each storage component reflecting the XML schema. In this scenario StoRM is able to identify the physical location of a requested data evaluating the logical identifier and the specified attributes following the XML schema, without querying any database service. This paper presents the namespace schema defined, the different entities represented and the technical details of the StoRM implementation

  16. Sustainable cultivation of broadleaved trees in a recycling community

    International Nuclear Information System (INIS)

    Christersson, L.

    1996-01-01

    In the future, with problems of global warming and acidification and with an increasing need to recirculate wastes of the community in an ecologically acceptable and economically sound manner, the cultivation of broadleaved species (birch, aspen, poplar, alder and willow in particular) on suitable forest land and on former agricultural land is of utmost interest if following the recycling philosophy. The wood produced could be used primarily for short fibres and for energy. Also of interest is the production of methanol, biogas and electricity, chipboard and laminates, in the context of a forest industry concerned with the further development of the raw materials. The main advantages of cultivating fast-growing, broadleaved trees on former agricultural land are that: * in Sweden it has been shown possible to produce 10-12 tonnes of dry matter of woody biomass per hectare and year by cultivating willows and hybrid poplars, * in such plantations, the energy efficiency ratio will be 1 to 15-20, meaning that for every energy unit used, 15-20 can be harvested, and * some residual products from society, such as sludges, ashes, and wastewaters can be used as fertilizers in such plantations. 16 refs

  17. The impact of climate change on ecosystem carbon dynamics at the Scandinavian mountain birch forest-tundra heath ecotone.

    Science.gov (United States)

    Sjögersten, Sofie; Wookey, Philip A

    2009-02-01

    Changes in temperature and moisture resulting from climate change are likely to strongly modify the ecosystem carbon sequestration capacity in high-latitude areas, both through vegetation shifts and via direct warming effects on photosynthesis and decomposition. This paper offers a synthesis of research addressing the potential impacts of climate warming on soil processes and carbon fluxes at the forest-tundra ecotone in Scandinavia. Our results demonstrated higher rates of organic matter decomposition in mountain birch forest than in tundra heath soils, with markedly shallower organic matter horizons in the forest. Field and laboratory experiments suggest that increased temperatures are likely to increase CO2 efflux from both tundra and forest soil providing moisture availability does not become limiting for the decomposition process. Furthermore, colonization of tundra heath by mountain birch forest would increase rates of decomposition, and thus CO2 emissions, from the tundra heath soils, which currently store substantial amounts of potentially labile carbon. Mesic soils underlying both forest and tundra heath are currently weak sinks of atmospheric methane, but the strength of this sink could be increased with climate warming and/or drying.

  18. Research on burning of biomass fuels, KTH

    Energy Technology Data Exchange (ETDEWEB)

    Hagstroem, U.; Zoukatas, N.; Kutscher, E.; Megas, L.

    1983-05-01

    The three main principles of combustion, namely burning over the fuel bed, under the bed, and the inverted flame have been investigated. Combustion under the fuel bed rendered the lowest emission of carbon monoxide, hydrocarbons, benzopyrene, particulates and tar. Emission is also reduced by preheating the primary incoming air. Burning of pine gives variable emissions whereas birch tree and lying log gives satisfactory combustion. High flame intensity and Reynolds number of the flame zone in the interval 5 to 8 x 10/sup 3/ also give low emission. A conventional wood burner with its flame over the fuel bed and with a water cooled combustion chamber produces 100 times more carbon monoxide than an advanced construction.

  19. Dynamics of phytomass of a tree stand of the deciduous-coniferous phytocenosis in middle taiga of Komi Republic

    Directory of Open Access Journals (Sweden)

    S. I. Tarasov

    2018-02-01

    Full Text Available Rock dumps of coalmines have high potential for forest regeneration and environmental capacity, which are dependent on the technology of reclamation and the properties of technogenic soils and grounds. Traditional forestry methods for obtaining the main criteria of biological indicators of woody vegetation were used in the study as follows: ground seed germination, seedling planting technology, composition and increment of tree stands, root structure, care harvesting of undergrowth, biotopic classification. Natural overgrowing of dumps is dependent on the availability of seeds and conditions for their germination and subsequent growth. Most of the zonal tree and shrub species are able to colonize and grow on the coalmine dumps. Mineralization of the dumps surfaces without rich soil stratum, porosity of the upper horizon of lithostratum, and low nutrient content (nitrogen give benefits in the growth and subsequent formation of birch, pine and sea-buckthorn stands. Afforestation is the cheapest and most effective method of biological reclamation. The analysis of artificial reforestation shows the probability of targeted plantation cultivation of various tree species. The use of a wide range of tree and shrub species make it possible to create biologically diverse intrazonal technogenic ecosystems with high recreational and economic productivity. Wildfires spreading out in spring season on herbaceous rags limit the overgrowth of the dumps by forest vegetation. Two-year cyclical increment decline of trees due to provocative spring warming takes place. The zoogenic factor, especially zoo chores distribution of berry plants, has essential value for forest forming process. By the results of forest formation analysis at rock dumps, alveolate-hilly technology of mine reclamation was developed, which allows to significantly improve dumps’ afforestation capacity, their biological posttechnogenic diversity and productivity.

  20. Ozone-induced H2O2 accumulation in field-grown aspen and birch is linked to foliar ultrastructure and peroxisomal activity

    Science.gov (United States)

    E. Oksanen; E. Häikiö; J. Sober; D.F. Karnosky

    2003-01-01

    Saplings of three aspen (Populus tremuloides) genotypes and seedlings of paper birch (Betula papyrifera) were exposed to elevated ozone (1.5x ambient) and 560 p.p.m. CO2, singly and in combination, from 1998 at the Aspen-FACE (free-air CO2 enrichment) site (Rhinelander, USA).

  1. Short-rotation forestry of birch, maple, poplar and willow in Flanders (Belgium) II. Energy production and CO2 emission reduction potential

    International Nuclear Information System (INIS)

    Walle, Inge van de; Camp, Nancy van; Casteele, Liesbet van de; Verheyen, Kris; Lemeur, Raoul

    2007-01-01

    Belgium, being an EU country, has committed itself to a 7.5% reduction of greenhouse gas emissions during the first commitment period of the Kyoto Protocol. Within this framework, the Flemish government aims at reaching a share of 6% of renewable electricity in the total electricity production by 2010. In this work, the biomass production of birch, maple, poplar and willow in a short-rotation forestry (SRF) plantation after a 4-year growth period served as the base to calculate the amount of (electrical) energy that could be produced by this type of bioenergy crop in Flanders. The maximum amount of electricity that could be provided by SRF biomass was estimated at 72.9 GWh e year -1 , which only accounts for 0.16% of the total electricity production in this region. Although the energy output was rather low, the bioenergy production process under consideration appeared to be more energy efficient than energy production processes based on fossil fuels. The high efficiency of birch compared to the other species was mainly due to the high calorific value of the birch wood. The maximum CO 2 emission reduction potential of SRF plantations in Flanders was estimated at only 0.09% of the total annual CO 2 emission. The most interesting application of SRF in Flanders seemed to be the establishment of small-scale plantations, linked to a local combined heat and power plant. These plantations could be established on marginal arable soils or on polluted sites, and they could be of importance in the densely populated area of Flanders because of other environmental benefits, among which their function as (temporary) habitat for many species

  2. 3D modeling of olive tree and simulating the harvesting forces

    Directory of Open Access Journals (Sweden)

    Glăvan Dan Ovidiu

    2017-01-01

    Full Text Available The paper presents the results of the study regarding the influence of shaking forces on olive tree harvesting systems. Shaking forces can be released through several methods. Important is the end result, namely the shaking force and the cadence of shaking speed. Mechanical and automatic harvesting methods collect more olives than traditional methods but may damage the olive trees. In order to prevent this damage, we need to calculate the necessary shaking force. An original research method is proposed to simulate shaking forces using a 3D olive tree model with Autodesk Inventor software. In the experiments, we use different shaking forces and various shaking speeds. We also use different diameters of the olive tree trunk. We analyze the results from this experiment to determine the optimal shaking force for harvesting olives without damaging the olive tree.

  3. Altered growth and fine root chemistry of Betula papyrifera and Acer saccharum under elevated CO2

    International Nuclear Information System (INIS)

    Parsons, W. F. J.; Kopper, B. J.; Lindroth, R. L.

    2003-01-01

    The effects of carbon dioxide enrichment on fine root chemical composition of two tree species common to northern hardwood forests was investigated. Results showed no change in the root/shoot ratios and fine root percentages in either birch or maple samples as a result of enriched carbon dioxide. Tissue nitrogen concentrations decreased in the fine roots, and consequently, carbon/nitrogen ratios increased with elevated carbon dioxide. In birch only, condensed tannins increased with carbon dioxide enrichment; in maple, neither complex tannins nor hydrosable tannins appear to have been influenced by elevated carbon dioxide. It is suspected that the responses of the tree saplings to elevated carbon dioxide may be related to their successional status. 37 refs., 2 tabs

  4. Miombo trees and mycorrhizae : ecological strategies, a basis for afforestation

    NARCIS (Netherlands)

    Munyanziza, E.

    1994-01-01

    This project has covered one or several aspects of the life cycle of the main miombo tree species, namely Afzelia quanzensis ,Brachystegia microphylla, Brachystegia spiciformis

  5. Seeds of Puerto Rican Trees and Shrubs: Second Installment

    Science.gov (United States)

    John K. Francis; Alberto Rodríguez

    1993-01-01

    Seed weights and germination information were obtained for 119 native Puerto Rican and naturalized exotic trees and shrubs. Fruit was collected from 34 of these species, and the weights were recorded. The data are presented in tables that list the species alphabetically by scientific names.

  6. STBase: one million species trees for comparative biology.

    Science.gov (United States)

    McMahon, Michelle M; Deepak, Akshay; Fernández-Baca, David; Boss, Darren; Sanderson, Michael J

    2015-01-01

    Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies from precomputed

  7. STBase: one million species trees for comparative biology.

    Directory of Open Access Journals (Sweden)

    Michelle M McMahon

    Full Text Available Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies

  8. Deposition and retention of air pollutants on vegetation and other atmospheric interfaces

    International Nuclear Information System (INIS)

    Jonas, R.

    1984-09-01

    The question of the deposition of aerosols and gases are applied to biological and ecological problems concerning the filtering aspect of atmospheric interfaces, especially vegetation, with respect to air pollution, and also the resulting pollutant effect. In order to determine the deposition of aerosols, numerous field experiments were carried out. The deposition of gases was treated on the basis of current literature data. The experiments indicate that the deposition of aerosols on grass largely depends on aerosol diameter, dry weight per unit area and the wind velocity or turbulence of the air layer near the ground. Of the interfaces studied, namely soil without vegetation, water, filter paper, smooth and structured metals, grass, clover and trees, the latter had the greatest dust collecting capability. It is recommended that in the afforestation of areas in the close proximity of industrial regions the common beech, silver birch and Japanese larch should be taken into particular consideration due to their great deposition effectiveness with respect to dusts and their comparatively high resistance to pollutant gases. Silver birch and moreover red horse chestnut should be considered for filtering the air in urban regions because of the high aerosol deposition. (orig./HP) [de

  9. Multicasting in Wireless Communications (Ad-Hoc Networks): Comparison against a Tree-Based Approach

    Science.gov (United States)

    Rizos, G. E.; Vasiliadis, D. C.

    2007-12-01

    We examine on-demand multicasting in ad hoc networks. The Core Assisted Mesh Protocol (CAMP) is a well-known protocol for multicast routing in ad-hoc networks, generalizing the notion of core-based trees employed for internet multicasting into multicast meshes that have much richer connectivity than trees. On the other hand, wireless tree-based multicast routing protocols use much simpler structures for determining route paths, using only parent-child relationships. In this work, we compare the performance of the CAMP protocol against the performance of wireless tree-based multicast routing protocols, in terms of two important factors, namely packet delay and ratio of dropped packets.

  10. Aerodynamic effects of trees on pollutant concentration in street canyons

    NARCIS (Netherlands)

    Buccolieri, R.; Gromke, C.B.; Sabatino, Di S.; Ruck, B.

    2009-01-01

    This paper deals with aerodynamic effects of avenue-like tree planting on flow and traffic-originated pollutant dispersion in urban street canyons by means of wind tunnel experiments and numerical simulations. Several parameters affecting pedestrian level concentration are investigated, namely plant

  11. Assessing urban forest effects and values, Scranton's urban forest

    Science.gov (United States)

    David J. Nowak; Robert E. III Hoehn; Daniel E. Crane; Jack C. Stevens; Vincent. Cotrone

    2010-01-01

    An analysis of trees in the urbanized portion of Scranton, PA, reveals that this area has about 1.2 million trees with canopies that cover 22.0 percent of the area. The most common tree species are red maple, gray birch, black cherry, northern red oak, and quaking aspen. Scranton's urban forest currently store about 93,300 tons of carbon valued at $1.9 million. In...

  12. Radiation mutagenesis in selection of apple trees

    International Nuclear Information System (INIS)

    Kolontaev, V.M.; Kolontaev, Yu.V.

    1977-01-01

    After X-radiation of grafts of antonovka apple trees, three groups of morphological mutants, namely, weak-, average- and violently-growing, have been revealed. Although the mutation spectrum has some indefinite character a dose of 6 kR causes, more frequently and in a greater number, the weak-growing mutants, and a dose of 2 kR, the violently-growing ones. Mutants of each group differ in the precociousness (precocious and latefruiting), type of fruiting (nospur and spur) and yield (high- and low-yielding). Using the method of radiation mutagenesis it is possible to rise the frequency and spectrum of somatic mutability of antonovka apple trees and to induce forms having valuable features

  13. Biomass functions for tree fractions from pine, spruce, and birch in Sweden; Biomassafunktioner foer traedfraktioner av tall, gran och bjoerk i Sverige

    Energy Technology Data Exchange (ETDEWEB)

    Petersson, Hans

    1999-07-01

    This report describes new functions for estimation of the biomass of a tree, separated in a number of fractions. The functions will be used to estimate the potential supply of wood fuel from the forests, and to make calculations of bound carbon and indirect nitrogen balance in the forest.

  14. MASSAHAKE whole tree harvesting method for pulp raw-material and fuel -- R&D in 1993--1998

    Energy Technology Data Exchange (ETDEWEB)

    Asplund, D.A.; Ahonen, M.A. [Technical Research Centre of Finland, Jyvaeskylae (Finland)

    1993-12-31

    In Finland biofuels and hydropower are the only indigenous fuels available. Peat, wood and wood derived fuels form about 18% of total primary energy requirement. The largest wood and wood fuel user in Finland is wood processing industry, paper, pulp, sawmills. Due to silvicultural activities the growth of forests has developed an instant need for first thinnings. This need is about 12% of total stem wood growth. With conventional harvesting methods this would produce about 8 mill. m{sup 3} pulp raw material and 2 mill. m{sup 3} wood fuel. By using integrated harvesting methods about 12 mill. m{sup 3} pulp raw material and 8 mill. m{sup 3} (about 1, 3 mill. toe) fuel could be produced. At the moment, there is no economically profitable method for harvesting first thinning trees for industrial use or energy production. Hence, there are a few ongoing research projects aiming at solving the question of integrated harvesting. MASSAHAKE chip purification method has been under R&D since 1987. Research with continuous experimental line (capacity 5--10 loose-m{sup 3}) has been done in 1991 and 1992. The research has concentrated on pine whole tree chip treatment, but preliminary tests with birch whole tree chips has been done. The experiment line will be modified for birth whole tree chips during 1993. Based on the research results more than 60% of the whole tree chips can be separated to pulp raw material with < 1% bark content. This amount is 1.5--2 times more than with present technology. The yield of fuel fraction is 2--4 times higher compared to present methods. Fuel fraction is homogeneous and could be used in most furnaces for energy production. By replacing fossil fuels with wood fuel in energy production it is possible to reduce CO{sub 2}-emissions significantly. This paper presents the wood fuel research areas in Finland and technical potential of MASSAHAKE-method including the plant for building a demonstration plant based on this technology.

  15. Imaginer, monter : la mémoire inachevée d’Auschwitz selon Georges Didi-Huberman

    Directory of Open Access Journals (Sweden)

    Adina Balint-Babos

    2014-12-01

    Écorces by Georges Didi-Huberman is the “récit-photo” of a wandering experience through the camps of Auschwitz-Birkenau in June 2010. The author takes photographs of some pieces of birch bark and reflects on what remains of Auschwitz today. Does this gesture have the power to shift him from mourning? In this article, I study the “inachevé” (the act of un-finishing as a metaphor of the birch bark: on the one hand, this is a small part of a tree, a part of a text, a fragment; on the other hand, this is an image in our memory, a precarious surface that is detached from a body (of a tree. What to expect of a photographed piece of birch bark in such a place like Birkenau? I thus analyze the question of mounting (le montage pieces of text and images, the idea of the partial and the production of “small truths” as figures of the unfinished space of our memory.

  16. Concentrations of Ca and Mg in early stages of sapwood decay in red spruce, eastern hemlock, red maple, and paper birch

    Science.gov (United States)

    Kevin T. Smith; Walter C. Shortle; Jody Jellison; Jon Connolly; Jonathan Schilling

    2007-01-01

    The decay of coarse woody debris is a key component in the formation of forest soil and in the biogeochemical cycles of Ca and Mg. We tracked changes in density and concentration of Ca and Mg in sapwood of red maple (Acer rubrum L.), red spruce (Picea rubens Sarg.), paper birch (Betula papyrifera Marsh.), and...

  17. Effects of elevated CO2 leaf diets on gypsy moth (Lepidoptera: Lymantriidae) respiration rates.

    Science.gov (United States)

    Foss, Anita R; Mattson, William J; Trier, Terry M

    2013-06-01

    Elevated levels of CO2 affect plant growth and leaf chemistry, which in turn can alter host plant suitability for insect herbivores. We examined the suitability of foliage from trees grown from seedlings since 1997 at Aspen FACE as diet for the gypsy moth (Lymantria dispar L.) Lepidoptera: Lymantriidae: paper birch (Betula papyrifera Marshall) in 2004-2005, and trembling aspen (Populus tremuloides Michaux) in 2006-2007, and measured consequent effects on larval respiration. Leaves were collected for diet and leaf chemistry (nutritional and secondary compound proxies) from trees grown under ambient (average 380 ppm) and elevated CO2 (average 560 ppm) conditions. Elevated CO2 did not significantly alter birch or aspen leaf chemistry compared with ambient levels with the exception that birch percent carbon in 2004 and aspen moisture content in 2006 were significantly lowered. Respiration rates were significantly higher (15-59%) for larvae reared on birch grown under elevated CO2 compared with ambient conditions, but were not different on two aspen clones, until larvae reached the fifth instar, when those consuming elevated CO2 leaves on clone 271 had lower (26%) respiration rates, and those consuming elevated CO2 leaves on clone 216 had higher (36%) respiration rates. However, elevated CO2 had no apparent effect on the respiration rates of pupae derived from larvae fed either birch or aspen leaves. Higher respiration rates for larvae fed diets grown under ambient or elevated CO2 demonstrates their lower efficiency of converting chemical energy of digested food stuffs extracted from such leaves into their biosynthetic processes.

  18. Water availability as driver of birch mortality in Hustai National Park, Mongolia

    NARCIS (Netherlands)

    Verhoeven, D.; Boer, de W.F.; Henkens, R.J.H.G.; Sass-Klaassen, U.G.W.

    2018-01-01

    Trees in the forest-steppe ecotones face stress due to reduced water availability as a consequence of more extreme seasonal fluctuations in precipitation and temperature. Together with browsing pressure this can hinder tree growth, tree regeneration and competition between trees and grasses. We

  19. Continuing Climate Warming Will Result in Failure of Post-Harvest Natural Regeneration across the Landscape in Interior Alaska

    Science.gov (United States)

    Morimoto, M.; Juday, G. P.; Huettmann, F.

    2016-12-01

    Following forest disturbance, the stand initiation stage decisively influences future forest structure. Understanding post-harvest regeneration, especially under climate change, is essential to predicting future carbon stores in this extensive forest biome. We apply IPCC B1, A1B, and A2 climate scenarios to generate plausible future forest conditions under different management. We recorded presence of white spruce, birch, and aspen in 726 plots on 30 state forest white spruce harvest units. We built spatially explicit models and scenarios of species presence/absence using TreeNet (Stochastic Gradient Boosting). Post-harvest tree regeneration predictions in calibration data closely matched the validation set, indicating tree regeneration scenarios are reliable. Early stage post-harvest regeneration is similar to post-fire regeneration and matches the pattern of long-term natural vegetation distribution, confirming that site environmental factors are more important than management practices. Post-harvest natural regeneration of tree species increases under moderate warming scenarios, but fails under strong warming scenarios in landscape positions with high temperatures and low precipitation. Under all warming scenarios, the most successful regenerating species following white spruce harvest is white spruce. Birch experiences about 30% regeneration failure under A2 scenario by 2050. White spruce and aspen are projected to regenerate more successfully when site preparation is applied. Although white spruce has been the major managed species, birch may require more intensive management. Sites likely to experience regeneration failure of current tree species apparently will experience biome shift, although adaptive migration of existing or new species might be an option. Our scenario modeling tool allows resource managers to forecast tree regeneration on productive managed sites that have made a disproportionate contribution to carbon flux in a critical region.

  20. Phenogenetic response of silver birch populations and half-sib families to elevated ozone and ultraviolet-B radiation at juvenile age

    International Nuclear Information System (INIS)

    Pliura, Alfas; Baliuckiene, Asta; Baliuckas, Virgilijus

    2008-01-01

    Phenogenetic response of silver birch populations and half-sib families to separate and combined elevated ozone (O 3 ) concentrations and ultraviolet-B (UV-B) radiation dozes was studied at juvenile age in the climatic chambers. Significant population and family effects were found for seedling height, lamina width, and leaf damage. The exposure to UV-B radiation decreased genetic variation at the stage of seed germination. Complex exposure to UV-B and O 3 caused an increase of genetic variation at the stage of intensive seedling growth: seedling height genetic variation in separate treatments increased from 23.7-38.6 to 33.7-65.7%, the increase for lamina width was from 10.2-13.9 to 13.6-31.8%. Different populations and families demonstrated differing response to elevated complex UV-B and O 3 exposure. Changes of genetic intra-population variation were population-specific. Such changes in genetic variation under the impact of stressors can alter adaptation, stability, and competitive ability of regenerating populations in a hardly predictive way. - Exposure to elevated UV-B and O 3 alters genetic variation of traits in progenies of silver birch populations

  1. Phenogenetic response of silver birch populations and half-sib families to elevated ozone and ultraviolet-B radiation at juvenile age

    Energy Technology Data Exchange (ETDEWEB)

    Pliura, Alfas [Lithuanian Forest Research Institute, Department of Tree Genetics and Breeding, Liepu 1, Girionys LT-53101, Kaunas District (Lithuania); Lithuanian University of Agriculture, Studentu 13, LT-53361 Akademija, Kaunas District (Lithuania)], E-mail: genetsk@mi.lt; Baliuckiene, Asta [Lithuanian Forest Research Institute, Department of Tree Genetics and Breeding, Liepu 1, Girionys LT-53101, Kaunas District (Lithuania); Baliuckas, Virgilijus [Lithuanian Forest Research Institute, Department of Tree Genetics and Breeding, Liepu 1, Girionys LT-53101, Kaunas District (Lithuania); Lithuanian University of Agriculture, Studentu 13, LT-53361 Akademija, Kaunas District (Lithuania)

    2008-11-15

    Phenogenetic response of silver birch populations and half-sib families to separate and combined elevated ozone (O{sub 3}) concentrations and ultraviolet-B (UV-B) radiation dozes was studied at juvenile age in the climatic chambers. Significant population and family effects were found for seedling height, lamina width, and leaf damage. The exposure to UV-B radiation decreased genetic variation at the stage of seed germination. Complex exposure to UV-B and O{sub 3} caused an increase of genetic variation at the stage of intensive seedling growth: seedling height genetic variation in separate treatments increased from 23.7-38.6 to 33.7-65.7%, the increase for lamina width was from 10.2-13.9 to 13.6-31.8%. Different populations and families demonstrated differing response to elevated complex UV-B and O{sub 3} exposure. Changes of genetic intra-population variation were population-specific. Such changes in genetic variation under the impact of stressors can alter adaptation, stability, and competitive ability of regenerating populations in a hardly predictive way. - Exposure to elevated UV-B and O{sub 3} alters genetic variation of traits in progenies of silver birch populations.

  2. Gene expression responses of paper birch (Betula papyrifera) to elevated CO2 and O3 during leaf maturation and senescence

    International Nuclear Information System (INIS)

    Kontunen-Soppela, Sari; Parviainen, Juha; Ruhanen, Hanna; Brosche, Mikael; Keinaenen, Markku; Thakur, Ramesh C.; Kolehmainen, Mikko; Kangasjaervi, Jaakko; Oksanen, Elina; Karnosky, David F.; Vapaavuori, Elina

    2010-01-01

    Gene expression responses of paper birch (Betula papyrifera) leaves to elevated concentrations of CO 2 and O 3 were studied with microarray analyses from three time points during the summer of 2004 at Aspen FACE. Microarray data were analyzed with clustering techniques, self-organizing maps, K-means clustering and Sammon's mappings, to detect similar gene expression patterns within sampling times and treatments. Most of the alterations in gene expression were caused by O 3 , alone or in combination with CO 2 . O 3 induced defensive reactions to oxidative stress and earlier leaf senescence, seen as decreased expression of photosynthesis- and carbon fixation-related genes, and increased expression of senescence-associated genes. The effects of elevated CO 2 reflected surplus of carbon that was directed to synthesis of secondary compounds. The combined CO 2 + O 3 treatment resulted in differential gene expression than with individual gas treatments or in changes similar to O 3 treatment, indicating that CO 2 cannot totally alleviate the harmful effects of O 3 . - Clustering analysis of birch leaf gene expression data reveals differential responses to O 3 and CO 2 .

  3. Can community members identify tropical tree species for REDD+ carbon and biodiversity measurements?

    DEFF Research Database (Denmark)

    Zhao, Mingxu; Brofeldt, Søren; Li, Qiaohong

    2016-01-01

    to take advantage of the same data for detecting changes in the tree diversity, using the richness and abundance of canopy trees as a proxy for biodiversity. If local community members are already assessing the above-ground biomass in a representative network of forest vegetation plots, it may require...... minimal further effort to collect data on the diversity of trees. We compare community members and trained scientists' data on tree diversity in permanent vegetation plots in montane forest in Yunnan, China. We show that local community members here can collect tree diversity data of comparable quality...... to trained botanists, at one third the cost. Without access to herbaria, identification guides or the Internet, community members could provide the ethno-taxonomical names for 95% of 1071 trees in 60 vegetation plots. Moreover, we show that the community-led survey spent 89% of the expenses at village level...

  4. Possibilities for the Use of Wood Ashes in Agriculture

    OpenAIRE

    Barbara Symanowicz; Marcin Becher; Dawid Jaremko; Korneliusz Skwarek

    2018-01-01

    The aim of the study was to determine the agricultural usefulness of the ashes obtained following the combustion of wood of fourteen tree species (pear tree, apple tree, aspen, ash, alder, birch, poplar, hornbeam, pine, common walnut, oak, hazel, bird cherry and spruce) in home fireplaces. The following physical properties of the ashes were determined: colour, solubility, porosity, absorbability, compression strength, degree of fineness, moisture content and spreadability. In the ashes...

  5. Allometries for Widely Spaced Populus ssp. and Betula ssp. in Nurse Crop Systems

    Directory of Open Access Journals (Sweden)

    Hendrik Stark

    2013-11-01

    Full Text Available Nurse crops of widely spaced pioneer trees are a silvicultural approach to protect the regeneration of frost sensitive target tree species. If overstorey nurse crops are harvested, they can provide additional short-term benefits through increased biomass production, e.g., for bioenergy. However, the intensification of biomass exports from forests might impact negatively on ecosystem nutrient pools. Thus, precise allometric biomass equations are required to quantify biomass and nutrient removals. Since an analysis of published allometric equations developed for typical, dense aspen or birch forests showed that the tree height-to-diameter ratio correlated positively and the proportion of branch biomass negatively with stand density, we developed new allometric biomass equations for widely spaced aspen and birch growing at 4 x 4 m spacing. These equations yielded a root mean squared error of 13% when predicting total aboveground woody biomass for our sample trees. In contrast, the corresponding root mean squared error produced by allometric biomass equations from the literature ranged between 17% to 106% of actual dry biomass. Our results show that specific allometric biomass equations are needed for widely spaced pioneer trees both for accurate estimates of biomass and the nutrients contained within.

  6. Soil Properties Control Glyphosate Sorption in Soils Amended with Birch Wood Biochar

    DEFF Research Database (Denmark)

    Kahawaththa Gamage, Inoka Damayanthi Kumari; Moldrup, Per; Paradelo, Marcos

    2016-01-01

    Abstract Despite a contemporary interest in biochar application to agricultural fields to improve soil quality and long-term carbon sequestration, a number of potential side effects of biochar incorporation in field soils remain poorly understood, e.g., in relation to interactions...... with agrochemicals such as pesticides. In a fieldbased study at two experimental sites in Denmark (sandy loam soils at Risoe and Kalundborg), we investigated the influence of birch wood biochar with respect to application rate, aging (7–19 months), and physico- chemical soil properties on the sorption coefficient......, Kd (L kg−1), of the herbicide glyphosate. We measured Kd in equilibrium batch sorption experiments with triplicate soil samples from 20 field plots that received biochar at different application rates (0 to 100 Mg ha−1). The results showed that pure biochar had a lower glyphosate Kd value as compared...

  7. Categorizing ideas about trees: a tree of trees.

    Science.gov (United States)

    Fisler, Marie; Lecointre, Guillaume

    2013-01-01

    The aim of this study is to explore whether matrices and MP trees used to produce systematic categories of organisms could be useful to produce categories of ideas in history of science. We study the history of the use of trees in systematics to represent the diversity of life from 1766 to 1991. We apply to those ideas a method inspired from coding homologous parts of organisms. We discretize conceptual parts of ideas, writings and drawings about trees contained in 41 main writings; we detect shared parts among authors and code them into a 91-characters matrix and use a tree representation to show who shares what with whom. In other words, we propose a hierarchical representation of the shared ideas about trees among authors: this produces a "tree of trees." Then, we categorize schools of tree-representations. Classical schools like "cladists" and "pheneticists" are recovered but others are not: "gradists" are separated into two blocks, one of them being called here "grade theoreticians." We propose new interesting categories like the "buffonian school," the "metaphoricians," and those using "strictly genealogical classifications." We consider that networks are not useful to represent shared ideas at the present step of the study. A cladogram is made for showing who is sharing what with whom, but also heterobathmy and homoplasy of characters. The present cladogram is not modelling processes of transmission of ideas about trees, and here it is mostly used to test for proximity of ideas of the same age and for categorization.

  8. Systematic evaluation of fault trees using real-time model checker UPPAAL

    International Nuclear Information System (INIS)

    Cha, Sungdeok; Son, Hanseong; Yoo, Junbeom; Jee, Eunkyung; Seong, Poong Hyun

    2003-01-01

    Fault tree analysis, the most widely used safety analysis technique in industry, is often applied manually. Although techniques such as cutset analysis or probabilistic analysis can be applied on the fault tree to derive further insights, they are inadequate in locating flaws when failure modes in fault tree nodes are incorrectly identified or when causal relationships among failure modes are inaccurately specified. In this paper, we demonstrate that model checking technique is a powerful tool that can formally validate the accuracy of fault trees. We used a real-time model checker UPPAAL because the system we used as the case study, nuclear power emergency shutdown software named Wolsong SDS2, has real-time requirements. By translating functional requirements written in SCR-style tabular notation into timed automata, two types of properties were verified: (1) if failure mode described in a fault tree node is consistent with the system's behavioral model; and (2) whether or not a fault tree node has been accurately decomposed. A group of domain engineers with detailed technical knowledge of Wolsong SDS2 and safety analysis techniques developed fault tree used in the case study. However, model checking technique detected subtle ambiguities present in the fault tree

  9. Use of woods at continual phytoextraction

    International Nuclear Information System (INIS)

    Maruskova, A.

    2007-01-01

    Phytoextraction that used natural hyper-accumulators for cleaning polluted soil has more advantages than induced phytoextraction. After all, using the tree species as hypo-accumulators is very rarely. This paper notes about few characteristics of tree species, especially birch (Betula pendula), which should encourage the research and next, their using in the process of phytoextraction. (author)

  10. WASTK: A Weighted Abstract Syntax Tree Kernel Method for Source Code Plagiarism Detection

    Directory of Open Access Journals (Sweden)

    Deqiang Fu

    2017-01-01

    Full Text Available In this paper, we introduce a source code plagiarism detection method, named WASTK (Weighted Abstract Syntax Tree Kernel, for computer science education. Different from other plagiarism detection methods, WASTK takes some aspects other than the similarity between programs into account. WASTK firstly transfers the source code of a program to an abstract syntax tree and then gets the similarity by calculating the tree kernel of two abstract syntax trees. To avoid misjudgment caused by trivial code snippets or frameworks given by instructors, an idea similar to TF-IDF (Term Frequency-Inverse Document Frequency in the field of information retrieval is applied. Each node in an abstract syntax tree is assigned a weight by TF-IDF. WASTK is evaluated on different datasets and, as a result, performs much better than other popular methods like Sim and JPlag.

  11. The influence of felling season and log-soaking temperature on the wetting and phenol formaldehyde adhesive bonding characteristics of birch veneer

    Science.gov (United States)

    Anti Rohumaa; Christopher G. Hunt; Charles R. Frihart; Pekka Saranpää; Martin Ohlmeyer; Mark Hughes

    2014-01-01

    Most adhesive studies employing wood veneer as the substrate assume that it is a relatively uniform material if wood species and veneer thickness are constant. In the present study, veneers from rotary cut birch (Betula pendula Roth) were produced from logs harvested in spring, autumn and winter, and soaked at 20°C and 70°C prior to peeling. Firstly...

  12. Response of a forest ecotone to ionizing radiation. Progress report, October 15, 1978-October 14, 1979

    International Nuclear Information System (INIS)

    Murphy, P.G.; Sharitz, R.R.

    1979-07-01

    Compositional and structural characteristics of three forest types, including aspen dominated, maple-birch dominated, and an intervening ecotone, were studied before and after irradiation in northern Wisconsin. Irradiation occurred during the summer of 1972. As of the summer of 1978, establishment of tree seedlings at 10 m from the radiation source continued to be inhibited by the vigorous development of ground vegetation except, in part, in the aspen area where seedling density increased sharply relative to 1977 because of an influx of Acer rubrum. By 1974 many of the seedlings at 20 m had reached the sapling size-class. At the present time it appears that recolonization of the 10 m irradiated zone by the original tree flora will be a very slow process, largely because of a dense growth of Rubus sp. and other heliophytes. As of 1978 the recovery of leaf litter production appeared to be continuing in all three areas although the ratios of tree to shrub litter were still well below preirradiation levels at 10 m and slightly below at 20 m. In most respects, the ecotone has shown properties and responses to radiation intermediate to those observed in the aspen and maple-birch areas. The rate and compositional characteristics of succession in the ecotone relative to aspen and maple-birch forest types is presently under study

  13. Response of a forest ecotone to ionizing radiation. Progress report, April 15, 1983-April 14, 1984

    International Nuclear Information System (INIS)

    Murphy, P.G.; Sharitz, R.R.

    1983-11-01

    Compositional and structural characteristics of three forest types, including aspen dominated, maple-birch dominated, and an intervening ecotone (midecotone), were studied before and after irradiation in northern Wisconsin. In all three areas, the density of seedlings at 10 m was greatly reduced within a year following the 1972 radiation event. In the maple-birch area seedlings were virtually absent at 10 m until 1982 and 1983 when their numbers were comparable to preirradiation levels. In the aspen and midecotone areas 1983 seedling densities at 10 m were only 50 and 17%, respectively, of the preirradiation levels. Woody plants of tree stature were eliminated at 10 m in all three areas within two years of irradiation but by 1982 only the aspen area lacked plants in this size class. In 1982 total leaf litter production was 26 and 63% below 1971 preirradiation levels at 10 m in the aspen and maple-birch areas, respectively. But at 10 m in the midecotone, it had increased, relative to 1971, by 27%. The ratio of shrub to tree leaf litter continues to decline as the heavily irradiated zone of all three areas continues to be recolonized by tree species and the canopy at 20 m continues to fill out. Present studeis emphasize the rate at which the three areas continue to be recolonized, and the composition of the recolonizing flora, relative to the preirradiation forest

  14. Ozone and climate - Effects of the excess of critical loads on birches and mountain plants; Ozon og klima - effekter av taalegrenseoverskridelser paa bjoerk og fjellplanter

    Energy Technology Data Exchange (ETDEWEB)

    Mortensen, L M

    1996-01-01

    The conference paper relates to the environmental effects of high concentrated ozone on the biomass production in Norway. The effects on birches and mountain plants from ozone together with the interaction between ozone and carbon dioxide and their influence on vegetation are discussed

  15. Small Worlds in the Tree Topologies of Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Qiao, Li; Lingguo, Cui; Baihai, Zhang

    2010-01-01

    In this study, the characteristics of small worlds are investigated in the context of the tree topologies of wireless sensor networks. Tree topologies, which construct spatial graphs with larger characteristic path lengths than random graphs and small clustering coefficients, are ubiquitous...... in wireless sensor networks. Suffering from the link rewiring or the link addition, the characteristic path length of the tree topology reduces rapidly and the clustering coefficient increases greatly. The variety of characteristic path length influences the time synchronization characteristics of wireless...... sensor networks greatly. With the increase of the link rewiring or the link addition probability, the time synchronization error decreases drastically. Two novel protocols named LEACH-SW and TREEPSI-SW are proposed to improve the performances of the sensor networks, in which the small world...

  16. Variation of Drying Strains between Tangential and Radial Directions in Asian White Birch

    Directory of Open Access Journals (Sweden)

    Zongying Fu

    2016-03-01

    Full Text Available In this study, wood disks of 30 mm in thickness cut from white birch (Betula platyphylla Suk logs were dried at a constant temperature (40 °C. The drying strains including practical shrinkage strain, elastic strain, viscoelastic creep strain and mechano-sorptive creep were measured both tangentially and radially. The effects of moisture content and radial position on each strain were also discussed qualitatively. Overall, the difference of the practical shrinkage strain between the tangential and radial directions was proportional to the distance from the pith. The tangential elastic strain and viscoelastic creep strain were higher than these strains in a radial direction, and they all decreased with the decrease of moisture content. Additionally, there were opposite mechano-sorptive creep between tangential and radial directions.

  17. A name is a name is a name: some thoughts and personal opinions about molluscan scientific names

    NARCIS (Netherlands)

    Dance, S.P.

    2009-01-01

    Since 1758, with the publication of Systema Naturae by Linnaeus, thousands of scientific names have been proposed for molluscs. The derivation and uses of many of them are here examined from various viewpoints, beginning with names based on appearance, size, vertical distribution, and location.

  18. Nitrogen fixation in legume trees: Measurement based on 15N techniques

    International Nuclear Information System (INIS)

    Sisworo, E.L.; Rasyid, H.; Sisworo, H.W.; Solahuddin, S.; Wemay, J.

    2000-01-01

    A field experiment has been conducted to measure the N2-fixation in six legume trees, namely Gliricidia sepium(F1), Sesbania sesban(F2), Caliandra tetragona(F3), Flemengia conges-7ta(F4), Acacia mangium(F5), and Leucena leucocephala (F6), using 15N techniques, e.g. the isotope dilution method. For this technique a reference tress, that is a non N2--fixing trees has to be used. In this experiment three reference trees were planted, but only one was used, which above ground growth was equal to the legyme trees. The reference tree chosen was Eucalyptus alba (R1). Data obtained from this experiment show that in general the legume trees have growth then the reference trees expressed, in dray weight of various plant parts and plants and total-N uptake (TN). At harvest some of the legume and reference tree have reached a 2.5 m height. The percentage of N2-fixation(%-fix) ranges from 50-70%. The highest %N-Fix was shown by Leucena leucocephala (F6) (70%N-Fix). High %N-Fix does not necessarily mean hgh N-Fix uptake(gn/tree)too. The N-Fix appears to be determined by the TN (gn/tree). The highest N-Fix was contributed by the leaves, which also has the highest percentage of total -N(%TN) compare to the other plant parts, i.e. roots, stem, and branches

  19. A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction

    Science.gov (United States)

    De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

    2016-01-01

    Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. PMID:25281847

  20. A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction.

    Science.gov (United States)

    De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

    2016-05-01

    Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society of Systematic Biologists.

  1. Crystallization and preliminary X-ray analysis of birch-pollen allergen Bet v 1 in complex with a murine monoclonal IgG Fab' fragment

    DEFF Research Database (Denmark)

    Spangfort, M D; Mirza, Osman Asghar; Gajhede, M

    1999-01-01

    of the clinical symptoms of allergy. In order to study the structural basis of allergen-antibody interaction, a complex between the major birch-pollen allergen Bet v 1 and a Fab' fragment isolated from the murine monoclonal Bet v 1 antibody BV16 has been crystallized. Complex crystals belong to space group P1...

  2. Experimental methods for the Palaeolithic dry distillation of birch bark: implications for the origin and development of Neandertal adhesive technology.

    Science.gov (United States)

    Kozowyk, P R B; Soressi, M; Pomstra, D; Langejans, G H J

    2017-08-31

    The destructive distillation of birch bark to produce tar has recently featured in debates about the technological and cognitive abilities of Neandertals and modern humans. The abilities to precisely control fire temperatures and to manipulate adhesive properties are believed to require advanced mental traits. However, the significance given to adhesive technology in these debates has quickly outgrown our understanding of birch bark tar and its manufacture using aceramic techniques. In this paper, we detail three experimental methods of Palaeolithic tar production ranging from simple to complex. We recorded the fuel, time, materials, temperatures, and tar yield for each method and compared them with the tar known from the Palaeolithic. Our results indicate that it is possible to obtain useful amounts of tar by combining materials and technology already in use by Neandertals. A ceramic container is not required, and temperature control need not be as precise as previously thought. However, Neandertals must have been able to recognize certain material properties, such as adhesive tack and viscosity. In this way, they could develop the technology from producing small traces of tar on partially burned bark to techniques capable of manufacturing quantities of tar equal to those found in the Middle Palaeolithic archaeological record.

  3. Rapid and long-term effects of water deficit on gas exchange and hydraulic conductance of silver birch trees grown under varying atmospheric humidity.

    Science.gov (United States)

    Sellin, Arne; Niglas, Aigar; Õunapuu-Pikas, Eele; Kupper, Priit

    2014-03-24

    Effects of water deficit on plant water status, gas exchange and hydraulic conductance were investigated in Betula pendula under artificially manipulated air humidity in Eastern Estonia. The study was aimed to broaden an understanding of the ability of trees to acclimate with the increasing atmospheric humidity predicted for northern Europe. Rapidly-induced water deficit was imposed by dehydrating cut branches in open-air conditions; long-term water deficit was generated by seasonal drought. The rapid water deficit quantified by leaf (ΨL) and branch water potentials (ΨB) had a significant (P gas exchange parameters, while inclusion of ΨB in models resulted in a considerably better fit than those including ΨL, which supports the idea that stomatal openness is regulated to prevent stem rather than leaf xylem dysfunction. Under moderate water deficit (ΨL≥-1.55 MPa), leaf conductance to water vapour (gL), transpiration rate and leaf hydraulic conductance (KL) were higher (P water deficit (ΨLwater availability, i.e. due to higher soil water potential in H treatment. Two functional characteristics (gL, KL) exhibited higher (P water deficit in trees grown under increased air humidity. The experiment supported the hypothesis that physiological traits in trees acclimated to higher air humidity exhibit higher sensitivity to rapid water deficit with respect to two characteristics - leaf conductance to water vapour and leaf hydraulic conductance. Disproportionate changes in sensitivity of stomatal versus leaf hydraulic conductance to water deficit will impose greater risk of desiccation-induced hydraulic dysfunction on the plants, grown under high atmospheric humidity, in case of sudden weather fluctuations, and might represent a potential threat in hemiboreal forest ecosystems. There is no trade-off between plant hydraulic capacity and photosynthetic water-use efficiency on short time scale.

  4. 76 FR 5396 - Notice of Intent To Prepare an Environmental Impact Statement for the Proposed Rising Tree Wind...

    Science.gov (United States)

    2011-01-31

    ...] Notice of Intent To Prepare an Environmental Impact Statement for the Proposed Rising Tree Wind Farm... on issues and alternatives related to the Rising Tree Wind Farm Draft EIS/EIR and possible CDCA PA by... INFORMATION CONTACT: For further information and/or to have your name added to our mailing list, contact...

  5. North-American norms for name disagreement: pictorial stimuli naming discrepancies.

    Directory of Open Access Journals (Sweden)

    Mary O'Sullivan

    Full Text Available Pictorial stimuli are commonly used by scientists to explore central processes; including memory, attention, and language. Pictures that have been collected and put into sets for these purposes often contain visual ambiguities that lead to name disagreement amongst subjects. In the present work, we propose new norms which reflect these sources of name disagreement, and we apply this method to two sets of pictures: the Snodgrass and Vanderwart (S&V set and the Bank of Standardized Stimuli (BOSS. Naming responses of the presented pictures were classified within response categories based on whether they were correct, incorrect, or equivocal. To characterize the naming strategy where an alternative name was being used, responses were further divided into different sub-categories that reflected various sources of name disagreement. Naming strategies were also compared across the two sets of stimuli. Results showed that the pictures of the S&V set and the BOSS were more likely to elicit alternative specific and equivocal names, respectively. It was also found that the use of incorrect names was not significantly different across stimulus sets but that errors were more likely caused by visual ambiguity in the S&V set and by a misuse of names in the BOSS. Norms for name disagreement presented in this paper are useful for subsequent research for their categorization and elucidation of name disagreement that occurs when choosing visual stimuli from one or both stimulus sets. The sources of disagreement should be examined carefully as they help to provide an explanation of errors and inconsistencies of many concepts during picture naming tasks.

  6. Chemical modification of birch allergen extract leads to a reduction in allergenicity as well as immunogenicity.

    Science.gov (United States)

    Würtzen, Peter Adler; Lund, Lise; Lund, Gitte; Holm, Jens; Millner, Anders; Henmar, Helene

    2007-01-01

    In Europe, specific immunotherapy is currently conducted with vaccines containing allergen preparations based on intact extracts. In addition to this, chemically modified allergen extracts (allergoids) are used for specific allergy treatment. Reduced allergenicity and thereby reduced risk of side effects in combination with retained ability to activate T cells and induce protective allergen-specific antibody responses has been claimed for allergoids. In the current study, we compared intact allergen extracts and allergoids with respect to allergenicity and immunogenicity. The immunological response to birch allergen extract, alum-adsorbed extract, birch allergoid and alum-adsorbed allergoid was investigated in vitro in human basophil histamine release assay and by stimulation of human allergen-specific T cell lines. In vivo, Bet v 1-specific IgG titers in mice were determined after repetitive immunizations. In all patients tested (n = 8), allergoid stimulations led to reduced histamine release compared to the intact allergen extract. However, the allergoid preparations were not recognized by Bet v 1-specific T cell lines (n = 7), which responded strongly to the intact allergen extract. Mouse immunizations showed a clearly reduced IgG induction by allergoids and a strongly potentiating effect of the alum adjuvant. Optimal IgG titers were obtained after 3 immunizations with intact allergen extracts, while 5 immunizations were needed to obtain maximal response to the allergoid. The reduced histamine release observed for allergoid preparations may be at the expense of immunological efficacy because the chemical modifications lead to a clear reduction in T cell activation and the ability to induce allergen-specific IgG antibody responses. Copyright 2007 S. Karger AG, Basel.

  7. Single Tree Vegetation Depth Estimation Tool for Satellite Services Link Design

    Directory of Open Access Journals (Sweden)

    Z. Hasirci

    2016-04-01

    Full Text Available Attenuation caused by tree shadowing is an important factor for describing the propagation channel of satellite services. Thus, vegetation effects should be determined by experimental studies or empirical formulations. In this study, tree types in the Black Sea Region of Turkey are classified based on their geometrical shapes into four groups such as conic, ellipsoid, spherical and hemispherical. The variations of the vegetation depth according to different tree shapes are calculated with ray tracing method. It is showed that different geometrical shapes have different vegetation depths even if they have same foliage volume for different elevation angles. The proposed method is validated with the related literature in terms of average single tree attenuation. On the other hand, due to decrease system requirements (speed, memory usage etc. of ray tracing method, an artificial neural network is proposed as an alternative. A graphical user interface is created for the above processes in MATLAB environment named vegetation depth estimation tool (VdET.

  8. Feasibility of Machine Learning Methods for Separating Wood and Leaf Points from Terrestrial Laser Scanning Data

    Science.gov (United States)

    Wang, D.; Hollaus, M.; Pfeifer, N.

    2017-09-01

    Classification of wood and leaf components of trees is an essential prerequisite for deriving vital tree attributes, such as wood mass, leaf area index (LAI) and woody-to-total area. Laser scanning emerges to be a promising solution for such a request. Intensity based approaches are widely proposed, as different components of a tree can feature discriminatory optical properties at the operating wavelengths of a sensor system. For geometry based methods, machine learning algorithms are often used to separate wood and leaf points, by providing proper training samples. However, it remains unclear how the chosen machine learning classifier and features used would influence classification results. To this purpose, we compare four popular machine learning classifiers, namely Support Vector Machine (SVM), Na¨ıve Bayes (NB), Random Forest (RF), and Gaussian Mixture Model (GMM), for separating wood and leaf points from terrestrial laser scanning (TLS) data. Two trees, an Erytrophleum fordii and a Betula pendula (silver birch) are used to test the impacts from classifier, feature set, and training samples. Our results showed that RF is the best model in terms of accuracy, and local density related features are important. Experimental results confirmed the feasibility of machine learning algorithms for the reliable classification of wood and leaf points. It is also noted that our studies are based on isolated trees. Further tests should be performed on more tree species and data from more complex environments.

  9. FEASIBILITY OF MACHINE LEARNING METHODS FOR SEPARATING WOOD AND LEAF POINTS FROM TERRESTRIAL LASER SCANNING DATA

    Directory of Open Access Journals (Sweden)

    D. Wang

    2017-09-01

    Full Text Available Classification of wood and leaf components of trees is an essential prerequisite for deriving vital tree attributes, such as wood mass, leaf area index (LAI and woody-to-total area. Laser scanning emerges to be a promising solution for such a request. Intensity based approaches are widely proposed, as different components of a tree can feature discriminatory optical properties at the operating wavelengths of a sensor system. For geometry based methods, machine learning algorithms are often used to separate wood and leaf points, by providing proper training samples. However, it remains unclear how the chosen machine learning classifier and features used would influence classification results. To this purpose, we compare four popular machine learning classifiers, namely Support Vector Machine (SVM, Na¨ıve Bayes (NB, Random Forest (RF, and Gaussian Mixture Model (GMM, for separating wood and leaf points from terrestrial laser scanning (TLS data. Two trees, an Erytrophleum fordii and a Betula pendula (silver birch are used to test the impacts from classifier, feature set, and training samples. Our results showed that RF is the best model in terms of accuracy, and local density related features are important. Experimental results confirmed the feasibility of machine learning algorithms for the reliable classification of wood and leaf points. It is also noted that our studies are based on isolated trees. Further tests should be performed on more tree species and data from more complex environments.

  10. Trees and Fields and Negative Polarity

    DEFF Research Database (Denmark)

    Vikner, Sten

    2011-01-01

    The paper takes as its point of departure a comparison between two kinds of approaches to clause structure, namely tree analyses like the generative analysis and field analyses like the sætningsskema analysis of Danish of Diderichsen (1946) and many others (or like the topologische Modell analysis...... to accounting for negative polarity items in English, Danish and German, both the more straightforward aspects and the more complex ones, e.g. the so-called NPI-verbs as well as the interaction between NPI-elements and because-clauses...

  11. Tree compression with top trees

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

    2013-01-01

    We introduce a new compression scheme for labeled trees based on top trees [3]. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

  12. Tree compression with top trees

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

    2015-01-01

    We introduce a new compression scheme for labeled trees based on top trees. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

  13. Improving software requirements specification for safety-related systems using the fault tree developed by an object-based method

    International Nuclear Information System (INIS)

    Cepin, M.; Mavko, B.

    1998-01-01

    A modification of the fault tree analysis is presented. The new fault tree integrates structural and behavioral models of a system. Information on the system structure is captured in the name of each gate and basic event of the fault tree. Information on the system behavior is captured in their description. Behavior is expressed using the axiomatic notation based on first order predicate logic. The new fault tree is a useful model for analysis and improvement of software requirements specification. The benefit of such improvements is reduced probability of failures in specification, which in turn results in increased reliability of the software.(author)

  14. Evaluation of Climate Change in northeastern China by means of d13C in tree-rings in the Great Xiang'An mountains region

    Science.gov (United States)

    Zhang, Qiqin; Lopez Caceres, Maximo Larry; Sugimoto, Atsuko; Wang, Xiaochun; Liu, Binhui

    2017-04-01

    The northeastern forest region of China represents one of the southern boundary of the Asian boreal forest and also represents the boundary between humid- semi humid area and arid- semi arid area of China. These forests are mainly dominated by larch (Larix gmelinii) stands with small areas covered by birch and pine forests. Increases in air temperature and precipitation caused by climate change are expected to have a great effect on forest ecosystems boundaries. Accordingly, from 1963-2006, air temperature has increased 1.5℃ in this region. Tree-ring chronologies are commonly used as indicator of climate changes and in recent decades the combination with carbon stable isotopes has shown a higher resolution in the results. Since this combine technique has not been used in northeastern China, we applied this combined technique to reconstruct the climate in the Great Xing'an mountains of northeastern China. Preliminary results showed that tree growth has increased in the middle and southernmost site in the last century while in the northernmost site it decreased for the same period which is in agreement with the mean air temperature increase from south to north in this region under negligible changes in precipitation regime. In contrast, tree-ring δ13C shows a gradual but steady increase along the three sites selected for our study, however the highest being observed in the middle site which experience the largest increased in air temperature in the last decade. This appears to indicate that increases in air temperature produced a stress in the stomatal conductance that so far has translated into tree ring growth decline.

  15. Design prototype detection tools of Porous Tree using microcontroller Arduino Uno R3 and piezoelectric sensor

    Science.gov (United States)

    Sujadi, H.; Bastian, A.; Tira

    2018-05-01

    In the city, many trees are found uprooted and cause accidents and many losses. No exception in the area of Majalengka Regency of West Java Province which can also anytime an accident or disaster caused by fallen trees, where in Majalengka district is logging trees on the street and public places are not done regularly. Based on the above problems, the need for tools that can detect a porous tree, to assist in the sorting of trees which should be felled and not felled by the party who has the authority of the general management of BMCK. Previously created tools to detect porous trees imported from Hungary and Germany, namely Arbosonic3D and Sonic Tomography. This design uses piezoelectric sensors to detect how much pressure is received by fragile and fragile trees, of course the fragile and fragile strength of trees will be different when exposed to the same pressure given the fragile density of fragile and fragile trees, then the data sent to Arduino Uno R3 to be processed into an information. This research produces a means of detecting the loss of a tree for early detection and no falling trees.

  16. Coppice Woods and Pollard Trees in the Visual Arts

    Directory of Open Access Journals (Sweden)

    Lacina Jan

    2016-11-01

    Full Text Available The sprouting capacity of some broadleaves has been used for their regeneration since ancient times. Often concurrently with taking advantage of sprouting stools, the trees used to be shaped also by pruning their stems, namely on pasturelands and in grazing forests. The activity of woodcutters and shepherds was obviously rather common in warmer climates with broadleaved stands because coppice and pollard trees appear relatively often in the visual arts from ancient works through the period if the Italian and German Renaissance up to the romantic and realistic landscape painting of the 19th century overlapping into the 20th century. For centuries, most frequently illustrated in European and Czech paintings have been pollard willows (Salix spp.. Other coppice and pollard tree species identified in paintings are oaks (Quercus spp., hornbeam (Carpinus betulus, European beech (Fagus sylvatica, European chestnut (Castanea sativa, and rarely other species, too. Artists apparently often used bizarrely shaped woods to increase the dramatic atmosphere of their landscape sceneries as well as figural compositions, and the coppice and pollard trees had certainly also a symbolic meaning in some of their works.

  17. Optimal Monotone Drawings of Trees

    OpenAIRE

    He, Dayu; He, Xin

    2016-01-01

    A monotone drawing of a graph G is a straight-line drawing of G such that, for every pair of vertices u,w in G, there exists abpath P_{uw} in G that is monotone in some direction l_{uw}. (Namely, the order of the orthogonal projections of the vertices of P_{uw} on l_{uw} is the same as the order they appear in P_{uw}.) The problem of finding monotone drawings for trees has been studied in several recent papers. The main focus is to reduce the size of the drawing. Currently, the smallest drawi...

  18. A comparison between fault tree analysis and reliability graph with general gates

    International Nuclear Information System (INIS)

    Kim, Man Cheol; Seong, Poong Hyun; Jung, Woo Sik

    2004-01-01

    Currently, level-1 probabilistic safety assessment (PSA) is performed on the basis of event tree analysis and fault tree analysis. Kim and Seong developed a new method for system reliability analysis named reliability graph with general gates (RGGG). The RGGG is an extension of conventional reliability graph, and it utilizes the transformation of system structures to equivalent Bayesian networks for quantitative calculation. The RGGG is considered to be intuitive and easy-to-use while as powerful as fault tree analysis. As an example, Kim and Seong already showed that the Bayesian network model for digital plant protection system (DPPS), which is transformed from the RGGG model for DPPS, can be shown in 1 page, while the fault tree model for DPPS consists of 64 pages of fault trees. Kim and Seong also insisted that Bayesian network model for DPPS is more intuitive because the one-to-one matching between each node in the Bayesian network model and an actual component of DPPS is possible. In this paper, we are going to give a comparison between fault tree analysis and the RGGG method with two example systems. The two example systems are the recirculation of in Korean standard nuclear power plants (KSNP) and the fault tree model developed by Rauzy

  19. Verification of Fault Tree Models with RBDGG Methodology

    International Nuclear Information System (INIS)

    Kim, Man Cheol

    2010-01-01

    Currently, fault tree analysis is widely used in the field of probabilistic safety assessment (PSA) of nuclear power plants (NPPs). To guarantee the correctness of fault tree models, which are usually manually constructed by analysts, a review by other analysts is widely used for verifying constructed fault tree models. Recently, an extension of the reliability block diagram was developed, which is named as RBDGG (reliability block diagram with general gates). The advantage of the RBDGG methodology is that the structure of a RBDGG model is very similar to the actual structure of the analyzed system and, therefore, the modeling of a system for a system reliability and unavailability analysis becomes very intuitive and easy. The main idea of the development of the RBDGG methodology is similar to that of the development of the RGGG (Reliability Graph with General Gates) methodology. The difference between the RBDGG methodology and RGGG methodology is that the RBDGG methodology focuses on the block failures while the RGGG methodology focuses on the connection line failures. But, it is also known that an RGGG model can be converted to an RBDGG model and vice versa. In this paper, a new method for the verification of the constructed fault tree models using the RBDGG methodology is proposed and demonstrated

  20. A novel model for Time-Series Data Clustering Based on piecewise SVD and BIRCH for Stock Data Analysis on Hadoop Platform

    Directory of Open Access Journals (Sweden)

    Ibgtc Bowala

    2017-06-01

    Full Text Available With the rapid growth of financial markets, analyzers are paying more attention on predictions. Stock data are time series data, with huge amounts. Feasible solution for handling the increasing amount of data is to use a cluster for parallel processing, and Hadoop parallel computing platform is a typical representative. There are various statistical models for forecasting time series data, but accurate clusters are a pre-requirement. Clustering analysis for time series data is one of the main methods for mining time series data for many other analysis processes. However, general clustering algorithms cannot perform clustering for time series data because series data has a special structure and a high dimensionality has highly co-related values due to high noise level. A novel model for time series clustering is presented using BIRCH, based on piecewise SVD, leading to a novel dimension reduction approach. Highly co-related features are handled using SVD with a novel approach for dimensionality reduction in order to keep co-related behavior optimal and then use BIRCH for clustering. The algorithm is a novel model that can handle massive time series data. Finally, this new model is successfully applied to real stock time series data of Yahoo finance with satisfactory results.

  1. Aerodynamic effects of trees on pollutant concentration in street canyons.

    Science.gov (United States)

    Buccolieri, Riccardo; Gromke, Christof; Di Sabatino, Silvana; Ruck, Bodo

    2009-09-15

    This paper deals with aerodynamic effects of avenue-like tree planting on flow and traffic-originated pollutant dispersion in urban street canyons by means of wind tunnel experiments and numerical simulations. Several parameters affecting pedestrian level concentration are investigated, namely plant morphology, positioning and arrangement. We extend our previous work in this novel aspect of research to new configurations which comprise tree planting of different crown porosity and stand density, planted in two rows within a canyon of street width to building height ratio W/H=2 with perpendicular approaching wind. Sulfur hexafluoride was used as tracer gas to model the traffic emissions. Complementary to wind tunnel experiments, 3D numerical simulations were performed with the Computational Fluid Dynamics (CFD) code FLUENT using a Reynolds Stress turbulence closure for flow and the advection-diffusion method for concentration calculations. In the presence of trees, both measurements and simulations showed considerable larger pollutant concentrations near the leeward wall and slightly lower concentrations near the windward wall in comparison with the tree-less case. Tree stand density and crown porosity were found to be of minor importance in affecting pollutant concentration. On the other hand, the analysis indicated that W/H is a more crucial parameter. The larger the value of W/H the smaller is the effect of trees on pedestrian level concentration regardless of tree morphology and arrangement. A preliminary analysis of approaching flow velocities showed that at low wind speed the effect of trees on concentrations is worst than at higher speed. The investigations carried out in this work allowed us to set up an appropriate CFD modelling methodology for the study of the aerodynamic effects of tree planting in street canyons. The results obtained can be used by city planners for the design of tree planting in the urban environment with regard to air quality issues.

  2. Generalising tree traversals and tree transformations to DAGs

    DEFF Research Database (Denmark)

    Bahr, Patrick; Axelsson, Emil

    2017-01-01

    We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead. The resul......We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead...... as the complementing theory with a number of examples....

  3. Automated fault tree analysis: the GRAFTER system

    International Nuclear Information System (INIS)

    Sancaktar, S.; Sharp, D.R.

    1985-01-01

    An inherent part of probabilistic risk assessment (PRA) is the construction and analysis of detailed fault trees. For this purpose, a fault tree computer graphics code named GRAFTER has been developed. The code system centers around the GRAFTER code. This code is used interactively to construct, store, update and print fault trees of small or large sizes. The SIMON code is used to provide data for the basic event probabilities. ENCODE is used to process the GRAFTER files to prepare input for the WAMCUT code. WAMCUT is used to quantify the top event probability and to identify the cutsets. This code system has been extensively used in various PRA projects. It has resulted in reduced manpower costs, increased QA capability, ease of documentation and it has simplified sensitivity analyses. Because of its automated nature, it is also suitable for LIVING PRA Studies which require updating and modifications during the lifetime of the plant. Brief descriptions and capabilities of the GRAFTER, SIMON and ENCODE codes are provided; an application of the GRAFTER system is outlined; and conclusions and comments on the code system are given

  4. Theoretical background to and practical utilization of short-rotation and energy forestry

    International Nuclear Information System (INIS)

    Christersson, L.

    1999-01-01

    This paper gives an overview of activities within short-rotation forestry in Sweden. The main interest lies in plantations of alder, poplar and birch and the study also mentions the industrial value of these tree species, especially for the pulp and paper, and furniture sector. The environmental impact of deciduous tree plantations as well as the possibility of waste water treatment is also discussed

  5. The three names

    NARCIS (Netherlands)

    Bas Jongenelen

    2011-01-01

    Two spectators are each asked to think of a girl's name (because your sister in law is pregnant and names are a big issue at the moment in your family.) You explain that you have a boy's name in your head, and you ask the spectators to think what this boy's name might be. You write three names on a

  6. Surface tree languages and parallel derivation trees

    NARCIS (Netherlands)

    Engelfriet, Joost

    1976-01-01

    The surface tree languages obtained by top-down finite state transformation of monadic trees are exactly the frontier-preserving homomorphic images of sets of derivation trees of ETOL systems. The corresponding class of tree transformation languages is therefore equal to the class of ETOL languages.

  7. Concentrations of base cations, phosphorous and nitrogen in tree stumps in Sweden, Finland and Denmark; Halter av baskatjoner, fosfor och kvaeve i stubbar i Sverige, Finland och Danmark

    Energy Technology Data Exchange (ETDEWEB)

    Hellsten, Sofie; Waengberg, Ingvar (The Swedish Environmental Research Institute Ltd., Stockholm (Sweden)); Helmisaari, Heljae-Sisko; Kaakinen, Seija; Kukkola, Mikko; Saarsalmi, Anna (Metla, Vantaa (Finland)); Melin, Ylva; Petersson, Hans (Swedish Univ. of Agriculture, Umeaa (Sweden)); Skovsgaard, Jens Peter (Forest and Landscape Denmark, Univ. of Copenhagen, Hoersholm (Denmark)); Akselsson, Cecilia (Lunds Univ., Lund (Sweden))

    2009-05-15

    Stump removal is becoming increasingly important in as demand for renewable energy is increasing. Nutrient concentrations in stumps are applied when evaluating the environmental effect of stump removal on acidification and nutrient balances in forest soil. The objectives of this study was to evaluate concentrations of nutrients in stumps in Sweden, Finland and Denmark, and to evaluate how nutrient concentrations vary with site characteristics, stand age and deposition level. Concentrations of N, P, Ca, K, Mg and Na in spruce, pine and birch stumps were assessed in eight sites across Scandinavia. The results of this study indicate that the concentration of nutrients are higher in birch stumps compared with spruce and pine. In Sweden and Finland, the nutrient concentrations were generally higher in the southern sites compared with northern sites in the country, except for P. Nutrient concentrations were significantly higher in the bark of the stump and the roots compared to the wood for all nutrients. Furthermore nutrients concentration increased significantly with decreasing root diameter. In Jaedraaas, Sweden, nutrient concentration of N, K, Mg and P in pine decreased with age of the stump harvested tree, for stumps < 65 years. This relation was not evident for other age spans or sites. Further studies are needed to provide a broader picture of how the nutrient concentrations vary with site characteristics, stand age and forestry management to get a better foundation when setting up recommendations for stump removal

  8. TreePics: visualizing trees with pictures

    Directory of Open Access Journals (Sweden)

    Nicolas Puillandre

    2017-09-01

    Full Text Available While many programs are available to edit phylogenetic trees, associating pictures with branch tips in an efficient and automatic way is not an available option. Here, we present TreePics, a standalone software that uses a web browser to visualize phylogenetic trees in Newick format and that associates pictures (typically, pictures of the voucher specimens to the tip of each branch. Pictures are visualized as thumbnails and can be enlarged by a mouse rollover. Further, several pictures can be selected and displayed in a separate window for visual comparison. TreePics works either online or in a full standalone version, where it can display trees with several thousands of pictures (depending on the memory available. We argue that TreePics can be particularly useful in a preliminary stage of research, such as to quickly detect conflicts between a DNA-based phylogenetic tree and morphological variation, that may be due to contamination that needs to be removed prior to final analyses, or the presence of species complexes.

  9. A comparative assessment of decision trees algorithms for flash flood susceptibility modeling at Haraz watershed, northern Iran.

    Science.gov (United States)

    Khosravi, Khabat; Pham, Binh Thai; Chapi, Kamran; Shirzadi, Ataollah; Shahabi, Himan; Revhaug, Inge; Prakash, Indra; Tien Bui, Dieu

    2018-06-15

    Floods are one of the most damaging natural hazards causing huge loss of property, infrastructure and lives. Prediction of occurrence of flash flood locations is very difficult due to sudden change in climatic condition and manmade factors. However, prior identification of flood susceptible areas can be done with the help of machine learning techniques for proper timely management of flood hazards. In this study, we tested four decision trees based machine learning models namely Logistic Model Trees (LMT), Reduced Error Pruning Trees (REPT), Naïve Bayes Trees (NBT), and Alternating Decision Trees (ADT) for flash flood susceptibility mapping at the Haraz Watershed in the northern part of Iran. For this, a spatial database was constructed with 201 present and past flood locations and eleven flood-influencing factors namely ground slope, altitude, curvature, Stream Power Index (SPI), Topographic Wetness Index (TWI), land use, rainfall, river density, distance from river, lithology, and Normalized Difference Vegetation Index (NDVI). Statistical evaluation measures, the Receiver Operating Characteristic (ROC) curve, and Freidman and Wilcoxon signed-rank tests were used to validate and compare the prediction capability of the models. Results show that the ADT model has the highest prediction capability for flash flood susceptibility assessment, followed by the NBT, the LMT, and the REPT, respectively. These techniques have proven successful in quickly determining flood susceptible areas. Copyright © 2018 Elsevier B.V. All rights reserved.

  10. Phase II Trial of Atezolizumab As First-Line or Subsequent Therapy for Patients With Programmed Death-Ligand 1-Selected Advanced Non-Small-Cell Lung Cancer (BIRCH)

    NARCIS (Netherlands)

    Peters, S.; Gettinger, S.; Johnson, M.L.; Janne, P.A.; Garassino, M.C.; Christoph, D.; Toh, C.K.; Rizvi, N.A.; Chaft, J.E.; Costa, E.; Patel, J.D.; Chow, L.Q.M.; Koczywas, M.; Ho, C.; Fruh, M.; Heuvel, M. van den; Rothenstein, J.; Reck, M.; Paz-Ares, L.; Shepherd, F.A.; Kurata, T.; Li, Z.; Qiu, J.; Kowanetz, M.; Mocci, S.; Shankar, G.; Sandler, A.; Felip, E.

    2017-01-01

    Purpose BIRCH was designed to examine the efficacy of atezolizumab, a humanized anti-programmed death-ligand 1 (PD-L1) monoclonal antibody, in advanced non-small-cell lung cancer (NSCLC) across lines of therapy. Patients were selected on the basis of PD-L1 expression on tumor cells (TC) or

  11. Parents accidentally substitute similar sounding sibling names more often than dissimilar names.

    Directory of Open Access Journals (Sweden)

    Zenzi M Griffin

    Full Text Available When parents select similar sounding names for their children, do they set themselves up for more speech errors in the future? Questionnaire data from 334 respondents suggest that they do. Respondents whose names shared initial or final sounds with a sibling's reported that their parents accidentally called them by the sibling's name more often than those without such name overlap. Having a sibling of the same gender, similar appearance, or similar age was also associated with more frequent name substitutions. Almost all other name substitutions by parents involved other family members and over 5% of respondents reported a parent substituting the name of a pet, which suggests a strong role for social and situational cues in retrieving personal names for direct address. To the extent that retrieval cues are shared with other people or animals, other names become available and may substitute for the intended name, particularly when names sound similar.

  12. System-level hazard analysis using the sequence-tree method

    International Nuclear Information System (INIS)

    Huang, H.-W.; Shih Chunkuan; Yih Swu; Chen, M.-H.

    2008-01-01

    A system-level PHA using the sequence-tree method is presented to perform safety-related digital I and C system SSA. The conventional PHA involves brainstorming among experts on various portions of the system to identify hazards through discussions. However, since the conventional PHA is not a systematic technique, the analysis results depend strongly on the experts' subjective opinions. The quality of analysis cannot be appropriately controlled. Therefore, this study presents a system-level sequence tree based PHA, which can clarify the relationship among the major digital I and C systems. This sequence-tree-based technique has two major phases. The first phase adopts a table to analyze each event in SAR Chapter 15 for a specific safety-related I and C system, such as RPS. The second phase adopts a sequence tree to recognize the I and C systems involved in the event, the working of the safety-related systems and how the backup systems can be activated to mitigate the consequence if the primary safety systems fail. The defense-in-depth echelons, namely the Control echelon, Reactor trip echelon, ESFAS echelon and Monitoring and indicator echelon, are arranged to build the sequence-tree structure. All the related I and C systems, including the digital systems and the analog back-up systems, are allocated in their specific echelons. This system-centric sequence-tree analysis not only systematically identifies preliminary hazards, but also vulnerabilities in a nuclear power plant. Hence, an effective simplified D3 evaluation can also be conducted

  13. ColorTree: a batch customization tool for phylogenic trees.

    Science.gov (United States)

    Chen, Wei-Hua; Lercher, Martin J

    2009-07-31

    Genome sequencing projects and comparative genomics studies typically aim to trace the evolutionary history of large gene sets, often requiring human inspection of hundreds of phylogenetic trees. If trees are checked for compatibility with an explicit null hypothesis (e.g., the monophyly of certain groups), this daunting task is greatly facilitated by an appropriate coloring scheme. In this note, we introduce ColorTree, a simple yet powerful batch customization tool for phylogenic trees. Based on pattern matching rules, ColorTree applies a set of customizations to an input tree file, e.g., coloring labels or branches. The customized trees are saved to an output file, which can then be viewed and further edited by Dendroscope (a freely available tree viewer). ColorTree runs on any Perl installation as a stand-alone command line tool, and its application can thus be easily automated. This way, hundreds of phylogenic trees can be customized for easy visual inspection in a matter of minutes. ColorTree allows efficient and flexible visual customization of large tree sets through the application of a user-supplied configuration file to multiple tree files.

  14. A Python-based Interface for Wide Coverage Lexicalized Tree-adjoining Grammars

    Directory of Open Access Journals (Sweden)

    Wang Ziqi

    2015-04-01

    Full Text Available This paper describes the design and implementation of a Python-based interface for wide coverage Lexicalized Tree-adjoining Grammars. The grammars are part of the XTAG Grammar project at the University of Pennsylvania, which were hand-written and semi-automatically curated to parse real-world corpora. We provide an interface to the wide coverage English and Korean XTAG grammars. Each XTAG grammar is lexicalized, which means at least one word selects a tree fragment (called an elementary tree or etree. Derivations for sentences are built by combining etrees using substitution (replacement of a tree node with an etree at the frontier of another etree and adjunction (replacement of an internal tree node in an etree by another etree. Each etree is associated with a feature structure representing constraints on substitution and adjunction. Feature structures are combined using unification during the combination of etrees. We plan to integrate our toolkit for XTAG grammars into the Python-based Natural Language Toolkit (NLTK: nltk.org. We have provided an API capable of searching the lexicalized etrees for a given word or multiple words, searching for a etree by name or function, display the lexicalized etrees to the user using a graphical view, display the feature structure associated with each tree node in an etree, hide or highlight features based on a regular expression, and browsing the entire tree database for each XTAG grammar.

  15. Geographic Names

    Data.gov (United States)

    Minnesota Department of Natural Resources — The Geographic Names Information System (GNIS), developed by the United States Geological Survey in cooperation with the U.S. Board of Geographic Names, provides...

  16. Recent Glacier Recession – a New Source of Postglacial Treeline and Climate History in the Swedish Scandes

    Directory of Open Access Journals (Sweden)

    Lisa Öberg

    2011-12-01

    Full Text Available Climate warming during the past century has imposed recession of glaciers and perennial snow/ice patches along the entire Swedish Scandes. On the newly exposed forefields, subfossil wood remnants are being outwashed from beneath ice and snow bodies. In Scandinavia, this kind of detrital wood is a previously unused source of postglacial vegetation and climate history. The present study reports radiocarbon dates of a set of 78 wood samples, retrieved from three main sites, high above modern treelines and stretching along the Swedish Scandes. In accord with previous studies, pine (Pinus sylvestris colonized early emerging nunataks already during the Late Glacial. Around 9600-9500 cal. yr BP a first massive wave of tree establishment, birch and pine, took place in “empty” glacier cirques. Both species grew 400-600 m above their present-ay treeline position and the summer temperatures may have been 3.5 °C warmer than present. In respons to Neoglacial cooling, treelines of both birch and pine descended until their final disappearance from the record 4400 and 5900 cal. yr BP, respectively. During the entire interval 9600 to 4400 cal. yr BP, birch prospered in a 100-150 broad belt above the uppermost pines. The recent emergence of tree remnants in the current habitats relates to the contemporary episode of climate warming, possibly unprecedented for several past millennia. It is inferred, by an anology with the past, that in a future scenario with summers 3.5 ° warmer than present, the birch treeline may rise by 600 m or so.

  17. Effects of Warming on Tree Species’ Recruitment in Deciduous Forests of the Eastern United States

    Energy Technology Data Exchange (ETDEWEB)

    Melillo, Jerry M. [Marine Biological Lab., Woods Hole, MA (United States); Clark, James S. [Duke Univ., Durham, NC (United States); Mohan, Jacqueline [Univ. of Georgia, Athens, GA (United States)

    2015-03-25

    Climate change is restructuring forests of the United States, although the details of this restructuring are currently uncertain. Rising temperatures of 2 to 8oC and associated changes in soil moisture will shift the competitive balance between species that compete for light and water, and so change their abilities to produce seed, germinate, grow, and survive. We have used large-scale experiments to determine the effects of warming on the most sensitive stage of species distributions, i.e., recruitment, in mixed deciduous forests in southern New England and in the Piedmont region of North Carolina. Two questions organized our research: (1) Might temperate tree species near the “warm” end of their range in the eastern United States decline in abundance during the coming century due to projected warming? and (2) Might trees near the “cool” end of their range in the eastern United States increase in abundance, or extend their range, during the coming 100 years because of projected warming? To explore these questions, we exposed seedlings to air and soil warming experiments in two eastern deciduous forest sites; one at the Harvard Forest (HF) in central Massachusetts, and the other at the Duke Forest (DF) in the Piedmont region of North Carolina. We focused on tree species common to both Harvard and Duke Forests (such as red, black, and white oaks), those near northern range limits (black oak, flowing dogwood, tulip poplar), and those near southern range limits (yellow birch, sugar maple, Virginia pine). At each site, we planted seeds and seedlings in common gardens established in temperature-controlled, open-top chambers. The experimental design was replicated and fully factorial and involved three temperature regimes (ambient, +3oC and +5oC) and two light regimes (closed forest canopy (low light) and gap conditions (high light)). Measured variables included Winter/Spring responses to temperature and mid-Summer responses to low soil moisture. This research

  18. On pricing futures options on random binomial tree

    International Nuclear Information System (INIS)

    Bayram, Kamola; Ganikhodjaev, Nasir

    2013-01-01

    The discrete-time approach to real option valuation has typically been implemented in the finance literature using a binomial tree framework. Instead we develop a new model by randomizing the environment and call such model a random binomial tree. Whereas the usual model has only one environment (u, d) where the price of underlying asset can move by u times up and d times down, and pair (u, d) is constant over the life of the underlying asset, in our new model the underlying security is moving in two environments namely (u 1 , d 1 ) and (u 2 , d 2 ). Thus we obtain two volatilities σ 1 and σ 2 . This new approach enables calculations reflecting the real market since it consider the two states of market normal and extra ordinal. In this paper we define and study Futures options for such models.

  19. Can Community Members Identify Tropical Tree Species for REDD+ Carbon and Biodiversity Measurements?

    Science.gov (United States)

    Zhao, Mingxu; Brofeldt, Søren; Li, Qiaohong; Xu, Jianchu; Danielsen, Finn; Læssøe, Simon Bjarke Lægaard; Poulsen, Michael Køie; Gottlieb, Anna; Maxwell, James Franklin; Theilade, Ida

    2016-01-01

    Biodiversity conservation is a required co-benefit of REDD+. Biodiversity monitoring is therefore needed, yet in most areas it will be constrained by limitations in the available human professional and financial resources. REDD+ programs that use forest plots for biomass monitoring may be able to take advantage of the same data for detecting changes in the tree diversity, using the richness and abundance of canopy trees as a proxy for biodiversity. If local community members are already assessing the above-ground biomass in a representative network of forest vegetation plots, it may require minimal further effort to collect data on the diversity of trees. We compare community members and trained scientists' data on tree diversity in permanent vegetation plots in montane forest in Yunnan, China. We show that local community members here can collect tree diversity data of comparable quality to trained botanists, at one third the cost. Without access to herbaria, identification guides or the Internet, community members could provide the ethno-taxonomical names for 95% of 1071 trees in 60 vegetation plots. Moreover, we show that the community-led survey spent 89% of the expenses at village level as opposed to 23% of funds in the monitoring by botanists. In participatory REDD+ programs in areas where community members demonstrate great knowledge of forest trees, community-based collection of tree diversity data can be a cost-effective approach for obtaining tree diversity information.

  20. Can Community Members Identify Tropical Tree Species for REDD+ Carbon and Biodiversity Measurements?

    Directory of Open Access Journals (Sweden)

    Mingxu Zhao

    Full Text Available Biodiversity conservation is a required co-benefit of REDD+. Biodiversity monitoring is therefore needed, yet in most areas it will be constrained by limitations in the available human professional and financial resources. REDD+ programs that use forest plots for biomass monitoring may be able to take advantage of the same data for detecting changes in the tree diversity, using the richness and abundance of canopy trees as a proxy for biodiversity. If local community members are already assessing the above-ground biomass in a representative network of forest vegetation plots, it may require minimal further effort to collect data on the diversity of trees. We compare community members and trained scientists' data on tree diversity in permanent vegetation plots in montane forest in Yunnan, China. We show that local community members here can collect tree diversity data of comparable quality to trained botanists, at one third the cost. Without access to herbaria, identification guides or the Internet, community members could provide the ethno-taxonomical names for 95% of 1071 trees in 60 vegetation plots. Moreover, we show that the community-led survey spent 89% of the expenses at village level as opposed to 23% of funds in the monitoring by botanists. In participatory REDD+ programs in areas where community members demonstrate great knowledge of forest trees, community-based collection of tree diversity data can be a cost-effective approach for obtaining tree diversity information.

  1. Celticecis, a Genus of Gall Midges (Diptera: Cecidomyiidae), Newly Reported for the Western Palearctic Region

    Science.gov (United States)

    Raymond J. Gagné; John C. Moser

    1997-01-01

    Many Holarctic genera of trees and shrubs are host over much of their ranges to particular genera of Cecidomyiidae. As examples, willows host gall midges of Rabdophaga and Iteomyia, oaks host Macrodiplosis and Polystepha, and birches host Semudobia in both the Nearctic and...

  2. Tree Colors: Color Schemes for Tree-Structured Data.

    Science.gov (United States)

    Tennekes, Martijn; de Jonge, Edwin

    2014-12-01

    We present a method to map tree structures to colors from the Hue-Chroma-Luminance color model, which is known for its well balanced perceptual properties. The Tree Colors method can be tuned with several parameters, whose effect on the resulting color schemes is discussed in detail. We provide a free and open source implementation with sensible parameter defaults. Categorical data are very common in statistical graphics, and often these categories form a classification tree. We evaluate applying Tree Colors to tree structured data with a survey on a large group of users from a national statistical institute. Our user study suggests that Tree Colors are useful, not only for improving node-link diagrams, but also for unveiling tree structure in non-hierarchical visualizations.

  3. TreePOD: Sensitivity-Aware Selection of Pareto-Optimal Decision Trees.

    Science.gov (United States)

    Muhlbacher, Thomas; Linhardt, Lorenz; Moller, Torsten; Piringer, Harald

    2018-01-01

    Balancing accuracy gains with other objectives such as interpretability is a key challenge when building decision trees. However, this process is difficult to automate because it involves know-how about the domain as well as the purpose of the model. This paper presents TreePOD, a new approach for sensitivity-aware model selection along trade-offs. TreePOD is based on exploring a large set of candidate trees generated by sampling the parameters of tree construction algorithms. Based on this set, visualizations of quantitative and qualitative tree aspects provide a comprehensive overview of possible tree characteristics. Along trade-offs between two objectives, TreePOD provides efficient selection guidance by focusing on Pareto-optimal tree candidates. TreePOD also conveys the sensitivities of tree characteristics on variations of selected parameters by extending the tree generation process with a full-factorial sampling. We demonstrate how TreePOD supports a variety of tasks involved in decision tree selection and describe its integration in a holistic workflow for building and selecting decision trees. For evaluation, we illustrate a case study for predicting critical power grid states, and we report qualitative feedback from domain experts in the energy sector. This feedback suggests that TreePOD enables users with and without statistical background a confident and efficient identification of suitable decision trees.

  4. Two Trees: Migrating Fault Trees to Decision Trees for Real Time Fault Detection on International Space Station

    Science.gov (United States)

    Lee, Charles; Alena, Richard L.; Robinson, Peter

    2004-01-01

    We started from ISS fault trees example to migrate to decision trees, presented a method to convert fault trees to decision trees. The method shows that the visualizations of root cause of fault are easier and the tree manipulating becomes more programmatic via available decision tree programs. The visualization of decision trees for the diagnostic shows a format of straight forward and easy understands. For ISS real time fault diagnostic, the status of the systems could be shown by mining the signals through the trees and see where it stops at. The other advantage to use decision trees is that the trees can learn the fault patterns and predict the future fault from the historic data. The learning is not only on the static data sets but also can be online, through accumulating the real time data sets, the decision trees can gain and store faults patterns in the trees and recognize them when they come.

  5. TimeTree2: species divergence times on the iPhone.

    Science.gov (United States)

    Kumar, Sudhir; Hedges, S Blair

    2011-07-15

    Scientists, educators and the general public often need to know times of divergence between species. But they rarely can locate that information because it is buried in the scientific literature, usually in a format that is inaccessible to text search engines. We have developed a public knowledgebase that enables data-driven access to the collection of peer-reviewed publications in molecular evolution and phylogenetics that have reported estimates of time of divergence between species. Users can query the TimeTree resource by providing two names of organisms (common or scientific) that can correspond to species or groups of species. The current TimeTree web resource (TimeTree2) contains timetrees reported from molecular clock analyses in 910 published studies and 17 341 species that span the diversity of life. TimeTree2 interprets complex and hierarchical data from these studies for each user query, which can be launched using an iPhone application, in addition to the website. Published time estimates are now readily accessible to the scientific community, K-12 and college educators, and the general public, without requiring knowledge of evolutionary nomenclature. TimeTree2 is accessible from the URL http://www.timetree.org, with an iPhone app available from iTunes (http://itunes.apple.com/us/app/timetree/id372842500?mt=8) and a YouTube tutorial (http://www.youtube.com/watch?v=CxmshZQciwo).

  6. A Preliminary Pharmacokinetic Study of Betulin, the Main Pentacyclic Triterpene from Extract of Outer Bark of Birch (Betulae alba cortex

    Directory of Open Access Journals (Sweden)

    Melanie N. Laszczyk

    2008-12-01

    Full Text Available During the last two decades triterpenes have attracted attention because of their pharmacological potential. Triterpene extract (TE from outer bark of birch consisting mainly of betulin is able to form an oleogel which was successfully tested in the treatment of actinic keratosis. Some aspects of TE in vitro pharmacology are already known. Now we show preliminary pharmacokinetics of betulin and results of a subchronic toxicity study of TE in rats and dogs. Because of poor aqueous solubility of the TE-triterpenes (< 0.1 μg/mL respectively, for pharmacokinetic studies it was suspended in sesame oil (rats, i.p. and PEG 400 / 0.9 % NaCl (dogs, s.c.. I.p. administered, betulin, the main component of TE, shows time dependency over a period of 4 h and reaches a dose-independent serum level of 0.13 μg/mL. Dose dependency was observed with s.c. administration. At 300 mg/kg a maximum plasma concentration of 0.33 μg/mL betulin was detected after 28 daily applications. The subchronic toxicity study showed no toxicity of TE in rats (i.p. and dogs (s.c.. In conclusion, triterpene extract from birch bark is safe, its betulin is bioavailable and in addition to published triterpene biological activities TE provides high potential for further pharmaceutical and pharmacological research.

  7. Response of a forest ecotone to ionizing radiation. Progress report, October 15, 1976--October 14, 1977

    International Nuclear Information System (INIS)

    Murphy, P.G.; Sharitz, R.R.

    1977-07-01

    Compositional and structural characteristics of three forest types, including aspen dominated, maple-birch dominated, and an intervening ecotone, were studied before and after irradiation in northern Wisconsin. Irradiation occurred during the summer of 1972. By the summer of 1973 the density of viable tree seedlings at 10 m from the radiation source was substantially reduced in all three areas relative to the preirradiation densities of 1971. As of the summer of 1976, establishment of tree seedlings continued to be inhibited by the vigorous development of ground vegetation. At 20 m, the density of seedlings in the three areas increased during the period from 1971 to 1973 in response to the partially opened canopy. The overall density of seedlings of Populus tremuloides and Acer rubrum increased markedly in the three areas and P. tremuloides invaded some areas in which it had not been found prior to irradiation. By 1974 many of the seedlings at 20 m had reached the sapling size-class. Viable trees greater than 2.5 cm in dbh were eliminated at 10 m in all three areas by June of 1974 and were reduced in density at 20 m. At the present time it appears that recolonization of the 10 m irradiated zone by the original tree flora will be a very slow process. Leaf litter production was reduced by up to 92 percent at 10 m and 62 percent at 20 m during the period from 1971 to 1973 in the irradiated areas. In most respects the ecotone has shown properties and responses to radiation intermediate to those observed in the aspen and maple-birch areas. The rate and compositional characteristics of succession in the ecotone relative to aspen and maple-birch forest types is presently under study

  8. A randomized DBPC trial to determine the optimal effective and safe dose of a SLIT-birch pollen extract for the treatment of allergic rhinitis : results of a phase II study

    NARCIS (Netherlands)

    Pfaar, O.; van Twuijver, E.; Boot, J. D.; Opstelten, D. J. E.; Klimek, L.; van Ree, R.; Diamant, Z.; Kuna, P.; Panzner, P.

    Background: Sublingual immunotherapy (SLIT) is a potential efficacious and safe treatment option for patients with respiratory, IgE-mediated allergic diseases. A combined tolerability, dose-finding study with a sublingual liquid birch pollen preparation (SB) was conducted. Methods: Two hundred and

  9. The impact of nitration on the structure and immunogenicity of the major birch pollen allergen Bet v 1.0101.

    Directory of Open Access Journals (Sweden)

    Chloé Ackaert

    Full Text Available Allergy prevalence has increased in industrialized countries. One contributing factor could be pollution, which can cause nitration of allergens exogenously (in the air or endogenously (in inflamed lung tissue. We investigated the impact of nitration on both the structural and immunological behavior of the major birch pollen allergen Bet v 1.0101 to determine whether nitration might be a factor in the increased incidence of allergy. Bet v 1.0101 was nitrated with tetranitromethane. Immune effects were assessed by measuring the proliferation of specific T-cell lines (TCLs upon stimulation with different concentrations of nitrated and unmodified allergen, and by measurement of cytokine release of monocyte-derived dendritic cells (moDCs and primary DCs (primDCs stimulated with nitrated versus unmodified allergen. HPLC-MS, crystallography, gel electrophoresis, amino acid analysis, size exclusion chromatography and molecular dynamics simulation were performed to characterize structural changes after nitration of the allergen. The proliferation of specific TCLs was higher upon stimulation with the nitrated allergen in comparison to the unmodified allergen. An important structural consequence of nitration was oligomerization. Moreover, analysis of the crystal structure of nitrated Bet v 1.0101 showed that amino acid residue Y83, located in the hydrophobic cavity, was nitrated to 100%. Both moDCs and primDCs showed decreased production of TH1-priming cytokines, thus favoring a TH2 response. These results implicate that nitration of Bet v 1.0101 might be a contributing factor to the observed increase in birch pollen allergy, and emphasize the importance of protein modifications in understanding the molecular basis of allergenicity.

  10. What's in a Name? Interlocutors Dynamically Update Expectations about Shared Names.

    Science.gov (United States)

    Gegg-Harrison, Whitney M; Tanenhaus, Michael K

    2016-01-01

    In order to refer using a name, speakers must believe that their addressee knows about the link between the name and the intended referent. In cases where speakers and addressees learned a subset of names together, speakers are adept at using only the names their partner knows. But speakers do not always share such learning experience with their conversational partners. In these situations, what information guides speakers' choice of referring expression? A speaker who is uncertain about a names' common ground (CG) status often uses a name and description together. This N+D form allows speakers to demonstrate knowledge of a name, and could provide, even in the absence of miscommunication, useful evidence to the addressee regarding the speaker's knowledge. In cases where knowledge of one name is associated with knowledge of other names, this could provide indirect evidence regarding knowledge of other names that could support generalizations used to update beliefs about CG. Using Bayesian approaches to language processing as a guiding framework, we predict that interlocutors can use their partner's choice of referring expression, in particular their use of an N+D form, to generate more accurate beliefs regarding their partner's knowledge of other names. In Experiment 1, we find that domain experts are able to use their partner's referring expression choices to generate more accurate estimates of CG. In Experiment 2, we find that interlocutors are able to infer from a partner's use of an N+D form which other names that partner is likely to know or not know. Our results suggest that interlocutors can use the information conveyed in their partner's choice of referring expression to make generalizations that contribute to more accurate beliefs about what is shared with their partner, and further, that models of CG for reference need to account not just for the status of referents, but the status of means of referring to those referents.

  11. Scattering From the Finite-Length, Dielectric Circular Cylinder. Part 2 - On the Validity of an Analytical Solution for Characterizing Backscattering from Tree Trunks at P-Band

    Science.gov (United States)

    2015-09-01

    19b. TELEPHONE NUMBER (Include area code) (301) 394-1741 Standard Form 298 (Rev. 8/98) Prescribed by ANSI Std. Z39.18 iii Contents List of...the Sapwood of Aspen, White Birch, Yellow Birch, and Sugar Maple. Drying Technology. 2008;26(5):568–578. 16. Peplinski NR, Ulaby FT, Dobson MC

  12. What’s in a Name? – Consequences of Naming Non-Human Animals

    DEFF Research Database (Denmark)

    Borkfelt, Sune

    2011-01-01

    have consequences for the way we think about animals (human and non-human), peoples, species, places, things etc. Through a blend of history, philosophy and representational theory—and using examples from, among other things, the Bible, Martin Luther, colonialism/imperialism and contemporary ways......The act of naming is among the most basic actions of language. Indeed, it is naming something that enables us to communicate about it in specific terms, whether the object named is human or non-human, animate or inanimate. However, naming is not as uncomplicated as we may usually think and names...... of keeping and regarding non-human animals—this paper attempts to trace the importance of (both specific and generic) naming to our relationships with the non-human. It explores this topic from the naming of the animals in Genesis to the names given and used by scientists, keepers of companion animals, media...

  13. Weyerhaeuser Export Facility at DuPont. Volume I.

    Science.gov (United States)

    1982-05-01

    exists on the DuPont site, in which the most common trees are lodgepole pine ( Pinus contorta) and western hemlock (Tsuga heterophtlla). Bog birch (Betula...Weyerhaeuser production facilities and storage at the proposed export facility. Tropolone methyl ethers have also been mentioned as potential contam

  14. Microbial Production of Xylitol from L-arabinose by Metabolically Engineered Escherichia coli

    Science.gov (United States)

    Xylitol is used commercially as a natural sweetener in some food products such as chewing gum, soft drinks, and confectionery. It is currently produced by chemical reduction of D-xylose derived from plant materials, mainly hemicellulosic hydrolysates from birch trees. Expanding the substrate range...

  15. Tree Nut Allergies

    Science.gov (United States)

    ... Blog Vision Awards Common Allergens Tree Nut Allergy Tree Nut Allergy Learn about tree nut allergy, how ... a Tree Nut Label card . Allergic Reactions to Tree Nuts Tree nuts can cause a severe and ...

  16. Trees of Laos and Vietnam: a field guide to 100 economically or ecologically important species

    NARCIS (Netherlands)

    Sam, Hoang Van; Nanthavong, Khamseng; Keßler, P.J.A.

    2004-01-01

    This field guide to 100 economically or ecologically important tree species from Laos and Vietnam enables the user to identify the included taxa with user-friendly keys. It includes scientific names, botanical descriptions of families, genera, and species. Specific information on distribution,

  17. Lognormal Approximations of Fault Tree Uncertainty Distributions.

    Science.gov (United States)

    El-Shanawany, Ashraf Ben; Ardron, Keith H; Walker, Simon P

    2018-01-26

    Fault trees are used in reliability modeling to create logical models of fault combinations that can lead to undesirable events. The output of a fault tree analysis (the top event probability) is expressed in terms of the failure probabilities of basic events that are input to the model. Typically, the basic event probabilities are not known exactly, but are modeled as probability distributions: therefore, the top event probability is also represented as an uncertainty distribution. Monte Carlo methods are generally used for evaluating the uncertainty distribution, but such calculations are computationally intensive and do not readily reveal the dominant contributors to the uncertainty. In this article, a closed-form approximation for the fault tree top event uncertainty distribution is developed, which is applicable when the uncertainties in the basic events of the model are lognormally distributed. The results of the approximate method are compared with results from two sampling-based methods: namely, the Monte Carlo method and the Wilks method based on order statistics. It is shown that the closed-form expression can provide a reasonable approximation to results obtained by Monte Carlo sampling, without incurring the computational expense. The Wilks method is found to be a useful means of providing an upper bound for the percentiles of the uncertainty distribution while being computationally inexpensive compared with full Monte Carlo sampling. The lognormal approximation method and Wilks's method appear attractive, practical alternatives for the evaluation of uncertainty in the output of fault trees and similar multilinear models. © 2018 Society for Risk Analysis.

  18. Photochemical production of aerosols from real plant emissions

    Directory of Open Access Journals (Sweden)

    Th. F. Mentel

    2009-07-01

    Full Text Available Emission of biogenic volatile organic compounds (VOC which on oxidation form secondary organic aerosols (SOA can couple the vegetation with the atmosphere and climate. Particle formation from tree emissions was investigated in a new setup: a plant chamber coupled to a reaction chamber for oxidizing the plant emissions and for forming SOA. Emissions from the boreal tree species birch, pine, and spruce were studied. In addition, α-pinene was used as reference compound. Under the employed experimental conditions, OH radicals were essential for inducing new particle formation, although O3 (≤80 ppb was always present and a fraction of the monoterpenes and the sesquiterpenes reacted with ozone before OH was generated. Formation rates of 3 nm particles were linearly related to the VOC carbon mixing ratios, as were the maximum observed volume and the condensational growth rates. For all trees, the threshold of new particle formation was lower than for α-pinene. It was lowest for birch which emitted the largest fraction of oxygenated VOC (OVOC, suggesting that OVOC may play a role in the nucleation process. Incremental mass yields were ≈5% for pine, spruce and α-pinene, and ≈10% for birch. α-Pinene was a good model compound to describe the yield and the growth of SOA particles from coniferous emissions. The mass fractional yields agreed well with observations for boreal forests. Despite the somewhat enhanced VOC and OH concentrations our results may be up-scaled to eco-system level. Using the mass fractional yields observed for the tree emissions and weighting them with the abundance of the respective trees in boreal forests SOA mass concentration calculations agree within 6% with field observations. For a future VOC increase of 50% we predict a particle mass increase due to SOA of 19% assuming today's mass contribution of pre-existing aerosol and oxidant levels.

  19. Big trees, old trees, and growth factor tables

    Science.gov (United States)

    Kevin T. Smith

    2018-01-01

    The potential for a tree to reach a great size and to live a long life frequently captures the public's imagination. Sometimes the desire to know the age of an impressively large tree is simple curiosity. For others, the date-of-tree establishment can make a big diff erence for management, particularly for trees at historic sites or those mentioned in property...

  20. A Suffix Tree Or Not a Suffix Tree?

    DEFF Research Database (Denmark)

    Starikovskaya, Tatiana; Vildhøj, Hjalte Wedel

    2015-01-01

    In this paper we study the structure of suffix trees. Given an unlabeled tree r on n nodes and suffix links of its internal nodes, we ask the question “Is r a suffix tree?”, i.e., is there a string S whose suffix tree has the same topological structure as r? We place no restrictions on S, in part...

  1. What's in a Name? Interlocutors dynamically update expectations about shared names

    Directory of Open Access Journals (Sweden)

    Whitney Marie Gegg-Harrison

    2016-02-01

    Full Text Available In order to refer using a name, speakers must know that their addressee knows about the link between the name and the intended referent. In cases where speakers and addressees learned names together, speakers are adept at using names only when their addressee knows them. But speakers do not always share such learning experience with their conversational partners. In these situations, what information guides speakers’ choice of referring expression? A speaker who is uncertain about a names’ common ground (CG status often uses a name and description together. This N+D form allows speakers to demonstrate knowledge of a name, and could provide, even in the absence of miscommunication, useful evidence to the addressee regarding the speaker’s knowledge. In cases where knowledge of one name is associated with knowledge of other names, could provide indirect evidence regarding knowledge of other names that could support generalizations used to update beliefs about CG. Using data explanation approaches to language processing as a guiding framework, we predict that interlocutors can use their partner’s choice of referring expression, in particular their use of an N+D form, to generate more accurate beliefs regarding their partner’s knowledge of other names. In Experiment 1, we find that domain experts are able to use their partner’s referring expression choices to generate more accurate estimates of CG. In Experiment 2, we find that interlocutors are able to infer from a partner’s use of an N+D form which other names that partner is likely to know or not know. Our results suggest that interlocutors can use the information conveyed in their partner’s choice of referring expression to make generalizations that contribute to more accurate beliefs about what is shared with their partner, and further, that models of CG for reference need to account not just for the status of referents, but the status of means of referring to those referents.

  2. Chlorophyll Catabolites in Senescent Leaves of the Plum Tree (Prunus domestica).

    Science.gov (United States)

    Erhart, Theresia; Mittelberger, Cecilia; Vergeiner, Clemens; Scherzer, Gerhard; Holzner, Barbara; Robatscher, Peter; Oberhuber, Michael; Kräutler, Bernhard

    2016-11-01

    In cold extracts of senescent leaves of the plum tree (Prunus domestica ssp. domestica), six colorless non-fluorescent chlorophyll catabolites (NCCs) were characterized, named Pd-NCCs. In addition, several minor NCC fractions were tentatively classified. The structure of the most polar one of the NCCs, named Pd-NCC-32, featured an unprecedented twofold glycosidation pattern. Three of the NCCs are also functionalized at their 3 2 -position by a glucopyranosyl group. In addition, two of these glycosidated NCCs carry a dihydroxyethyl group at their 18-position. In the polar Pd-NCC-32, the latter group is further glycosidated at the terminal 18 2 -position. Four other major Pd-NCCs and one minor Pd-NCC were identified with five NCCs from higher plants known to belong to the 'epi'-series. In addition, tentative structures were derived for two minor fractions, classified as yellow chlorophyll catabolites, which represented (formal) oxidation products of two of the observed Pd-NCCs. The chlorophyll catabolites in leaves of plum feature the same basic structural pattern as those found in leaves of apple and pear trees. © 2016 The Authors. Chemistry & Biodiversity Published by Wiley-VHCA AG, Zurich, Switzerland.

  3. Summer Roost Tree Selection by Eastern Red, Seminole, and Evening Bats in the Upper Coastal Plain of South Carolina

    Energy Technology Data Exchange (ETDEWEB)

    Menzel, M.A.; Carter, T.C.; Ford, W.M.; Chapman, B.R.; Ozier, J.

    2000-01-01

    Radiotraction of six eastern red bats, six seminole bats and twenty-four evening bats to 55, 61, and 65 day roosts during 1996 to 1997 in the Upper Coastal Plain of South Carolina. For each species, testing was done for differences between used roost trees and randomly located trees. Also tested for differences between habitat characteristics surrounding roost trees and randomly located trees. Eastern Red and Seminole bats generally roosted in canopies of hardwood and pine while clinging to foilage and small branches. Evening bats roosted in cavities or under exfoliating bark in pines and dead snags. Forest management strategies named within the study should be beneficial for providing roosts in the Upper Coastal Plain of South Carolina.

  4. Fault tree analysis of loss of cooling to a HALW storage tank

    International Nuclear Information System (INIS)

    Nomura, Yasushi

    1992-01-01

    Results of a scenario identification, a fault tree construction and an analysis for a loss of cooling accident in a High Activity Liquid Waste (HALW) tank of a typical model of reprocessing facility, is rendered together with considerations of the system reliability improvement by changing the model design. Model plant data, basic failure frequency data and a fault tree analysis named FTL have been introduced from NUKEM GmbH, Germany. They are throughly reviewed and reevaluated at JAERI, and improved to apply to Japanese facilities. A general systematic method for constructing fault trees is used to avoid missing scenarios, thus all of the 10 conceivable accident scenarios for 'HALW storage tank without cooling, HALW boiling' are identified, and a total failure frequency are calculated to be in the 90 % confidence interval of (1.1 ∼ 5.8) x 10 -6 /yr for the German model plant. (author)

  5. Vegetative propagation of the endangered Azorean tree, Picconia azorica

    OpenAIRE

    Martins, José; Moreira, Orlando; Silva, Luís; Moura, Mónica

    2011-01-01

    Picconia azorica (Tutin) Knobl. (Oleaceae), commonly named “pau-branco”, is an endangered tree endemic to the Azores. Vegetative propagation may be important for the preservation of this species, particularly in depauperate populations, with low seed set. The objective of this study was to evaluate effective techniques for the vegetative propagation of P. azorica by rooting of stem cuttings or by air layering. Rooting substrate, IBA concentration, and the portion of the area of the terminal l...

  6. Tree-growth analyses to estimate tree species' drought tolerance

    NARCIS (Netherlands)

    Eilmann, B.; Rigling, A.

    2012-01-01

    Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

  7. Names of Southern African grasses: Name changes and additional ...

    African Journals Online (AJOL)

    The main reasons for changes in botanical names are briefly reviewed, with examples from the lists. At this time, about 1040 grass species and subspecific taxa are recognized in the subcontinent. Keywords: botanical research; botanical research institute; botany; grass; grasses; identification; name change; nomenclature; ...

  8. TreeNetViz: revealing patterns of networks over tree structures.

    Science.gov (United States)

    Gou, Liang; Zhang, Xiaolong Luke

    2011-12-01

    Network data often contain important attributes from various dimensions such as social affiliations and areas of expertise in a social network. If such attributes exhibit a tree structure, visualizing a compound graph consisting of tree and network structures becomes complicated. How to visually reveal patterns of a network over a tree has not been fully studied. In this paper, we propose a compound graph model, TreeNet, to support visualization and analysis of a network at multiple levels of aggregation over a tree. We also present a visualization design, TreeNetViz, to offer the multiscale and cross-scale exploration and interaction of a TreeNet graph. TreeNetViz uses a Radial, Space-Filling (RSF) visualization to represent the tree structure, a circle layout with novel optimization to show aggregated networks derived from TreeNet, and an edge bundling technique to reduce visual complexity. Our circular layout algorithm reduces both total edge-crossings and edge length and also considers hierarchical structure constraints and edge weight in a TreeNet graph. These experiments illustrate that the algorithm can reduce visual cluttering in TreeNet graphs. Our case study also shows that TreeNetViz has the potential to support the analysis of a compound graph by revealing multiscale and cross-scale network patterns. © 2011 IEEE

  9. Towards Verification of Operational Procedures Using Auto-Generated Diagnostic Trees

    Science.gov (United States)

    Kurtoglu, Tolga; Lutz, Robyn; Patterson-Hine, Ann

    2009-01-01

    The design, development, and operation of complex space, lunar and planetary exploration systems require the development of general procedures that describe a detailed set of instructions capturing how mission tasks are performed. For both crewed and uncrewed NASA systems, mission safety and the accomplishment of the scientific mission objectives are highly dependent on the correctness of procedures. In this paper, we describe how to use the auto-generated diagnostic trees from existing diagnostic models to improve the verification of standard operating procedures. Specifically, we introduce a systematic method, namely the Diagnostic Tree for Verification (DTV), developed with the goal of leveraging the information contained within auto-generated diagnostic trees in order to check the correctness of procedures, to streamline the procedures in terms of reducing the number of steps or use of resources in them, and to propose alternative procedural steps adaptive to changing operational conditions. The application of the DTV method to a spacecraft electrical power system shows the feasibility of the approach and its range of capabilities

  10. Climate Responses in Growth and Wood Anatomy of Imoprtant Forest Tree Species in Denmark

    DEFF Research Database (Denmark)

    Huang, Weiwei

    and high temperatures on the development of Danish tree species are scarcely investigated. Through a dendroecological approach this dissertation assessed the growth responses related to increment, xylem anatomy and wood property of eight different important tree species, namely Picea abies (L.) Karst......., Picea sitchensis (Bong.) Carr., Abies alba Mill., Abies grandis (Dougl.) Lindl., Pseudotsuga mensiesii (Mirb.) Franco, Larix kaempferi (Lamb.) Carr., Quercus robur L. and Fagus sylvatica L., to long-term drought and high temperatures, aiming at identifying a species portfolio matching future climate...... intolerant species, mainly due to their low drought tolerance (both species) and susceptibility to high autumn temperature (only P. abies). Overall, this dissertation improves the understanding of how drought and high temperatures have impacted and will influence the growth of tree species in Danish forest...

  11. The music of trees: the intergenerative tie between primary care and public health.

    Science.gov (United States)

    Whitehouse, Peter

    2016-01-01

    Stories help us frame and understand complex ideas and challenges. Metaphors are particularly powerful linguistic devices that guide and extend our thinking by bridging conceptual domains, for example to consider the brain as a digital computer. Trees are widely used as metaphors for broad concepts like evolution, history, society, and even life itself, i.e. 'the tree of life'. Tree-like diagrams of roots and branches are used to demonstrate historical and cultural relationships, for example, between different species or different languages. In this paper, we describe a theatrical character called a tree doctor which is a living metaphor. A human being, namely the author, lectures, acts or dances as a tree and offers lessons to Homo Sapiens about 'holistic' ideas of health. The character teaches us to not only see the value of our relationships to trees, but the importance of seeing forests as well the individual trees. The metaphorical statement that we should not 'miss the forest for the trees' means we should learn to think of health embedded in systems and communities. In medicine, we too often focus on individual molecules, pharmaceuticals, or even patients and miss the bigger picture of public and environmental health. In a time of great ecological system change, the tree doctor points to broad ethical responsibility for each other and future generations of humans and other living creatures. The character embraces arts and particularly music as a powerful way of infusing purpose and improving the qualities of our lives together, especially as we age. The tree doctor knows the value of intergenerational relationships. But it also points to intergenerative innovations across many cultural domains, disciplines and professions. The tree doctor supports primary care and empowers the value of intergenerational relationships, art and music in the recommendations doctors make to patients to improve their health and well-being.

  12. Bibliography on Cold Regions Science and Technology, Volume 46, Part 1, 1992

    Science.gov (United States)

    1992-01-01

    analysis, snose cover is depleted and a bhoswl-shaped depression (a tree Ecology, Nutrient cycle. Bitmass.46-3969 well) forms. Around aspen and birch...ibscrsatuons ori heteroigenrerus asterlee hysis an miromehanis: arevew o selctedItow and siome attcmptS 1 tomidel percirlattirn in (%o moirds Ice hyscs

  13. DNA markers for forensic identification of non-human biological traces

    NARCIS (Netherlands)

    Wesselink, M.

    2018-01-01

    In this thesis, DNA markers are described that enable forensically relevant classification of three groups of non-human biological traces: fungi (Chapter 1), domestic cats (Chapters 2, 3 an d 4) and birch trees (Chapters 5 and 6). Because the forensic questions associated with these traces require

  14. Environmental Impact Study of the Northern Section of the Upper Mississippi River. Pool 5.

    Science.gov (United States)

    1973-11-01

    commercially valuable tree species: silver maple (Acer saccharinum), American elm (Ulmus americana), slippery elm (Ulmus rubrea), green ash (Fraxinus...this division is generally birch, elm , and cotton wood, all the cliffs being bordered by cedars. The navigation, as far as the Iowa River is good, but

  15. TREE SELECTING AND TREE RING MEASURING IN DENDROCHRONOLOGICAL INVESTIGATIONS

    Directory of Open Access Journals (Sweden)

    Sefa Akbulut

    2004-04-01

    Full Text Available Dendrochronology is a method of dating which makes use of the annual nature of tree growth. Dendrochronology may be divided into a number of subfields, each of which covers one or more aspects of the use of tree ring data: dendroclimatology, dendrogeomorphology, dendrohydrology, dendroecology, dendroarchaelogy, and dendrogylaciology. Basic of all form the analysis of the tree rings. The wood or tree rings can aid to dating past events about climatology, ecology, geology, hydrology. Dendrochronological studies are conducted either on increment cores or on discs. It may be seen abnormalities on tree rings during the measurement like that false rings, missing rings, reaction wood. Like that situation, increment cores must be extracted from four different sides of each tree and be studied as more as on tree.

  16. Visualizing Individual Tree Differences in Tree-Ring Studies

    Directory of Open Access Journals (Sweden)

    Mario Trouillier

    2018-04-01

    Full Text Available Averaging tree-ring measurements from multiple individuals is one of the most common procedures in dendrochronology. It serves to filter out noise from individual differences between trees, such as competition, height, and micro-site effects, which ideally results in a site chronology sensitive to regional scale factors such as climate. However, the climate sensitivity of individual trees can be modulated by factors like competition, height, and nitrogen deposition, calling attention to whether average chronologies adequately assess climatic growth-control. In this study, we demonstrate four simple but effective methods to visually assess differences between individual trees. Using individual tree climate-correlations we: (1 employed jitter plots with superimposed metadata to assess potential causes for these differences; (2 plotted the frequency distributions of climate correlations over time as heat maps; (3 mapped the spatial distribution of climate sensitivity over time to assess spatio-temporal dynamics; and (4 used t-distributed Stochastic Neighborhood Embedding (t-SNE to assess which trees were generally more similar in terms of their tree-ring pattern and their correlation with climate variables. This suite of exploratory methods can indicate if individuals in tree-ring datasets respond differently to climate variability, and therefore, should not solely be explored with climate correlations of the mean population chronology.

  17. Establishing correspondence in wood: the challenge and some solutions?

    Science.gov (United States)

    Courtin, Gerard M; Fairgrieve, Scott I

    2013-09-01

    Establishing correspondence between the upper portion of a white birch sapling, a suspected weapon, and a potential source from a stand of trees was posed to one of us (GMC). A bending force shattered the sapling, precluding physical matching. Three white birch saplings were taken from the same stand of trees in a similar manner. Correspondence was achieved by measuring the width of the annual rings along four radii from a disk cut above and below the break. The regression coefficient of the data from the two disks from the same sapling was r(2) = 0.95. Regressing the upper disk against the lower disk of two other saplings resulted in r(2) values of 0.26 and 0.17, respectively. The various characteristics that are confined to a wood stem as part of its normal process of growth can be used to eliminate candidate saplings and establish correspondence between two pieces of wood. © 2013 American Academy of Forensic Sciences.

  18. Diet-mediated effects of heavy metal pollution on growth and immune response in the geometrid moth Epirrita autumnata

    International Nuclear Information System (INIS)

    Ooik, Tapio van; Rantala, Markus J.; Saloniemi, Irma

    2007-01-01

    The potential capacity of larval growth and immune response traits of the autumnal moth to adapt to heavy metal polluted environment was tested experimentally. Both the relative growth rate (RGR) and pupal weight were significantly higher in control trees than on polluted trees, indicating that metal pollution prevented the insect from achieving maximal growth on birch leaves. Larval growth rates of different broods differed significantly between metal contaminated and control birches. However, pupal weight of broods, which is considered more important for fitness than growth rate, in response to pollution did not differ. Immune response was significantly higher in moths exposed to pollution than in moths that were exposed to control environment suggesting that pollution enhances the immune defense of defoliators. Encapsulation rate tended to differ between broods indicating that the immune function has potential to respond to selection. - Immune function of an insect herbivore increased in heavy metal polluted environment and some insect traits showed potential to adapt to polluted environment

  19. Fault tree handbook

    International Nuclear Information System (INIS)

    Haasl, D.F.; Roberts, N.H.; Vesely, W.E.; Goldberg, F.F.

    1981-01-01

    This handbook describes a methodology for reliability analysis of complex systems such as those which comprise the engineered safety features of nuclear power generating stations. After an initial overview of the available system analysis approaches, the handbook focuses on a description of the deductive method known as fault tree analysis. The following aspects of fault tree analysis are covered: basic concepts for fault tree analysis; basic elements of a fault tree; fault tree construction; probability, statistics, and Boolean algebra for the fault tree analyst; qualitative and quantitative fault tree evaluation techniques; and computer codes for fault tree evaluation. Also discussed are several example problems illustrating the basic concepts of fault tree construction and evaluation

  20. Birch pollen influence the severity of atopic eczema – prospective clinical cohort pilot study and ex vivo penetration study

    Directory of Open Access Journals (Sweden)

    Fölster-Holst R

    2015-10-01

    Full Text Available Regina Fölster-Holst,1 Jagoda Galecka,1 Sigo Weißmantel,1 Ute Dickschat,2 Frank Rippke,3 Kerstin Bohnsack,3 Thomas Werfel,4 Katja Wichmann,4 Matthias Buchner,1 Thomas Schwarz,1 Annika Vogt,5 Jürgen Lademann,5 Martina C Meinke5 1Department of Dermatology, Venerology and Allergy, University of Kiel, 2Wörth, 3Beiersdorf AG, Hamburg, 4Department of Dermatology, Venerology and Allergy, Division of Immunodermatology and Allergy Research, Hannover Medical School, Hannover, 5Department of Dermatology, Venerology and Allergology, Charité – Universitätsmedizin Berlin, Berlin, Germany Abstract: There is little clinical evidence for a correlation between the severity of atopic eczema (AE and pollen exposition. To obtain more data, we performed a clinical cohort pilot study about the influence of pollen on AE between sensitized and nonsensitized subjects and an experimental study addressing the cutaneous penetration of pollen into the skin. Fifty-five patients were monitored during birch pollen season. To study the cutaneous penetration, grass pollen allergens were applied on excised skin and the uptake in CD1c-expressing dendritic cells was investigated. The correlation between environmental pollen load and severity of the Scoring Atopic Dermatitis (SCORAD score and pruritus was observed, regardless of the status of sensitization. The sensitized group recovered significantly worse after the birch pollen season. Remarkably higher amounts of pollen allergens taken up by CD1c cells were detected in epidermal cells derived from skin explants with a disturbed epidermal barrier. These findings suggest an exacerbating role of pollen in AE utilizing the epidermal route. Keywords: aeroallergens, atopic eczema, seasonality, skin antigen-presenting cells, skin barrier penetration

  1. A free-air system for long-term stable carbon isotope labeling of adult forest trees

    Science.gov (United States)

    Stable carbon (C) isotopes, in particular employed in labeling experiments, are an ideal tool to broaden our understanding of C dynamics in trees and forest ecosystems. Here, we present a free-air exposure system, named isoFACE, designed for long-term stable C isotope labeling in...

  2. Ecosystem Service of Shade Trees on Nutrient Cycling and Productivity of Coffee Agro-ecosystems

    Directory of Open Access Journals (Sweden)

    Rusdi Evizal

    2009-05-01

    Full Text Available Shade trees are significant in certification scheme of sustainable coffee production. They play an importance role on ecosystem functioning. This research is aimed to study ecosystem service of shade trees in some coffee agro-ecosystems particularly on nutrient cycling and land productivity. Four agro-ecosys tems of Robusta coffee (Coffea canephora, namely sun coffee (without shade trees, coffee shaded by Michelia champaca, coffee shaded by Gliricidia sepium, and coffee shaded by Erythrina indica are evaluated during 2007—2008. Smallholder coffee plantation in Sumberjaya Subdistrict, West Lampung, which managed under local standard were employed using Randomized Complete Block Design with 3 replications. The result showed that litter fall dynamic from shade trees and from coffee trees was influenced by rainfall. Shade trees decreased weed biomass while increased litter fall production. In dry season, shade trees decreased litter fall from coffee shaded by M. champaca. G. sepium and E. indica shaded coffee showed higher yield than sun coffee and M. champaca shaded coffee. Except for M. champaca shaded coffee, yield had positive correlation (r = 0.99 with litter fall production and had negative correlation (r = —0.82 with weed biomass production. Biomass production (litter fall + weed of sun coffee and shaded coffee was not significantly different. Litter fall of shade trees had significance on nutrient cycle mainly to balance the lost of nitrogen in coffee bean harvesting.Key Words: Coffea canephora, Michelia champaca, Gliricidia sepium, Erythrina indica, litter production, nutrient cycle, coffee yield.

  3. Increased tree establishment in Lithuanian peat bogs--insights from field and remotely sensed approaches.

    Science.gov (United States)

    Edvardsson, Johannes; Šimanauskienė, Rasa; Taminskas, Julius; Baužienė, Ieva; Stoffel, Markus

    2015-02-01

    Over the past century an ongoing establishment of Scots pine (Pinus sylvestris L.), sometimes at accelerating rates, is noted at three studied Lithuanian peat bogs, namely Kerėplis, Rėkyva and Aukštumala, all representing different degrees of tree coverage and geographic settings. Present establishment rates seem to depend on tree density on the bog surface and are most significant at sparsely covered sites where about three-fourth of the trees have established since the mid-1990s, whereas the initial establishment in general was during the early to mid-19th century. Three methods were used to detect, compare and describe tree establishment: (1) tree counts in small plots, (2) dendrochronological dating of bog pine trees, and (3) interpretation of aerial photographs and historical maps of the study areas. In combination, the different approaches provide complimentary information but also weigh up each other's drawbacks. Tree counts in plots provided a reasonable overview of age class distributions and enabled capturing of the most recently established trees with ages less than 50 years. The dendrochronological analysis yielded accurate tree ages and a good temporal resolution of long-term changes. Tree establishment and spread interpreted from aerial photographs and historical maps provided a good overview of tree spread and total affected area. It also helped to verify the results obtained with the other methods and an upscaling of findings to the entire peat bogs. The ongoing spread of trees in predominantly undisturbed peat bogs is related to warmer and/or drier climatic conditions, and to a minor degree to land-use changes. Our results therefore provide valuable insights into vegetation changes in peat bogs, also with respect to bog response to ongoing and future climatic changes. Copyright © 2014 Elsevier B.V. All rights reserved.

  4. Determination of the suitability of chips from selected hardwoods for the production of furfural and charcoal. [Birches, beeches, oaks, alders

    Energy Technology Data Exchange (ETDEWEB)

    Piotrowski, Z

    1979-01-01

    Debarked, cut beech, birch, alder, and oak residues from forestry and woodworking operations contain 16.56-19.73% pentosans and as such can be used for hydrolysis to furfural (I). The hydrolytic residue (mostly lignocellulose) can be carbonized at 400 degrees to charcoal. The hydrolysis is carried out continuously with steam at 250-300 degrees and 1.18 MPa. The residue chips are first soaked in water at 90 degrees for 4 hours and then fed into the hydrolyzer countercurrently to the steam. The yields of I are 5-6% and the yields of charcoal are approximately 20% on the chip weight.

  5. Phylogeny mandalas for illustrating the Tree of Life.

    Science.gov (United States)

    Hasegawa, Masami

    2017-12-01

    A circular phylogeny with photos or drawings of species is named a phylogeny mandala. This is one of the ways for illustrating the Tree of Life, and is suitable to show visually how the biodiversity has developed in the course of evolution as clarified by the molecular phylogenetics. To demonstrate the recent progress of molecular phylogenetics, six phylogeny mandalas for various taxonomic groups of life were presented; i.e., (1) Eukaryota, (2) Metazoa, (3) Hexapoda, (4) Tetrapoda, (5) Eutheria, and (6) Primates. Copyright © 2016 Elsevier Inc. All rights reserved.

  6. Distribution of Chinese names

    Science.gov (United States)

    Huang, Ding-wei

    2013-03-01

    We present a statistical model for the distribution of Chinese names. Both family names and given names are studied on the same basis. With naive expectation, the distribution of family names can be very different from that of given names. One is affected mostly by genealogy, while the other can be dominated by cultural effects. However, we find that both distributions can be well described by the same model. Various scaling behaviors can be understood as a result of stochastic processes. The exponents of different power-law distributions are controlled by a single parameter. We also comment on the significance of full-name repetition in Chinese population.

  7. Modular tree automata

    DEFF Research Database (Denmark)

    Bahr, Patrick

    2012-01-01

    Tree automata are traditionally used to study properties of tree languages and tree transformations. In this paper, we consider tree automata as the basis for modular and extensible recursion schemes. We show, using well-known techniques, how to derive from standard tree automata highly modular...

  8. Rate of tree carbon accumulation increases continuously with tree size.

    Science.gov (United States)

    Stephenson, N L; Das, A J; Condit, R; Russo, S E; Baker, P J; Beckman, N G; Coomes, D A; Lines, E R; Morris, W K; Rüger, N; Alvarez, E; Blundo, C; Bunyavejchewin, S; Chuyong, G; Davies, S J; Duque, A; Ewango, C N; Flores, O; Franklin, J F; Grau, H R; Hao, Z; Harmon, M E; Hubbell, S P; Kenfack, D; Lin, Y; Makana, J-R; Malizia, A; Malizia, L R; Pabst, R J; Pongpattananurak, N; Su, S-H; Sun, I-F; Tan, S; Thomas, D; van Mantgem, P J; Wang, X; Wiser, S K; Zavala, M A

    2014-03-06

    Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle--particularly net primary productivity and carbon storage--increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree's total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to undertand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

  9. Grading of Parameters for Urban Tree Inventories by City Officials, Arborists, and Academics Using the Delphi Method

    Science.gov (United States)

    Östberg, Johan; Delshammar, Tim; Wiström, Björn; Nielsen, Anders Busse

    2013-03-01

    Tree inventories are expensive to conduct and update, so every inventory carried out must be maximized. However, increasing the number of constituent parameters increases the cost of performing and updating the inventory, illustrating the need for careful parameter selection. This article reports the results of a systematic expert rating of tree inventories aiming to quantify the relative importance of each parameter. Using the Delphi method, panels comprising city officials, arborists, and academics rated a total of 148 parameters. The total mean score, the top ranking parameters, which can serve as a guide for decision-making at practical level and for standardization of tree inventories, were: Scientific name of the tree species and genera, Vitality, Coordinates, Hazard class, and Identification number. The study also examined whether the different responsibilities and usage of urban tree databases among organizations and people engaged in urban tree inventories affected their prioritization. The results revealed noticeable dissimilarities in the ranking of parameters between the panels, underlining the need for collaboration between the research community and those commissioning, administrating, and conducting inventories. Only by applying such a transdisciplinary approach to parameter selection can urban tree inventories be strengthened and made more relevant.

  10. British Sign Name Customs

    Science.gov (United States)

    Day, Linda; Sutton-Spence, Rachel

    2010-01-01

    Research presented here describes the sign names and the customs of name allocation within the British Deaf community. While some aspects of British Sign Language sign names and British Deaf naming customs differ from those in most Western societies, there are many similarities. There are also similarities with other societies outside the more…

  11. Chemical Relationship On Detection Of Ganoderma Disease On Oil Palm Tree System

    Science.gov (United States)

    Imran, S. N. M.; Baharudin, F.; Ali, M. F.; Rahiman, M. H. F.

    2018-04-01

    Detection of fungal disease is the major issues in agricultural management and production. This disease would attack the plantation area and damaging the based root or the stem tissue of the trees. In oil palm industry, Basal Stem Rot (BSR) is the major disease in Malaysia that caused by a fungal named Ganoderma Boninense species. Since agricultural areas in Malaysia are the great factors that contribute in the economic sector, therefore the prevention and controlling this disease situation are needed to reduce the extent of the infection. These plant diseases are mostly being caused by the inflectional disease form such as viruses, viroids, bacteria, protozoa and even parasitic plants. It also could included mites and vertebrate or small insects that consume the plant tissues. Studies focused more on the breeding and relationship of the disease in the stumps, roots and soil system if oil palm trees by identifying the heavy metal; Phosphorus, copper, Iron, Manganese, Potassium and Zinc characteristic. Samples were taken from various types of physical appearance of the trees. It shows the relationship of the fungal disease breeding between oil palm trees and the heavy metals does affect the tree’s system.

  12. Browsing affects intra-ring carbon allocation in species with contrasting wood anatomy.

    Science.gov (United States)

    Palacio, S; Paterson, E; Sim, A; Hester, A J; Millard, P

    2011-02-01

    Current knowledge on tree carbon (C) allocation to wood is particularly scarce in plants subjected to disturbance factors, such as browsing, which affects forest regeneration worldwide and has an impact on the C balance of trees. Furthermore, quantifying the degree to which tree rings are formed from freshly assimilated vs. stored carbohydrates is highly relevant for our understanding of tree C allocation. We used (13)C labelling to quantify seasonal allocation of stored C to wood formation in two species with contrasting wood anatomy: Betula pubescens Ehrh. (diffuse-porous) and Quercus petraea [Matt.] Liebl. (ring-porous). Clipping treatments (66% shoot removal, and unclipped) were applied to analyse the effect of browsing on C allocation into tree rings, plus the effects on tree growth, architecture, ring width and non-structural carbohydrates (NSCs). The relative contribution of stored C to wood formation was greater in the ring-porous (55-70%) than in the diffuse-porous species (35-60%), although each species followed different seasonal trends. Clipping did not cause a significant depletion of C stores in either species. Nonetheless, a significant increase in the proportion of stored C allocated to earlywood growth was observed in clipped birches, and this could be explained through changes in tree architecture after clipping. The size of C pools across tree species seems to be important in determining the variability of seasonal C allocation patterns to wood and their sensibility to disturbances such as browsing. Our results indicate that the observed changes in C allocation to earlywood in birch were not related to variations in the amount or concentration of NSC stores, but to changes in the seasonal availability of recently assimilated C caused by modifications in tree architecture after browsing.

  13. A Catskill Flora and Economic Botany, III: Apetalae. Including the Poplars, Willows, Hickories, Birches, Beeches, Oaks, Elms, Nettles, Sorrels, Docks, and Smartweeds. Bulletin No. 443, New York State Museum.

    Science.gov (United States)

    Brooks, Karl L.

    This compendium deals with the ecology and economic importance of the poplars, willows, hickories, birches, beeches, oaks, elms, nettles, sorrels, docks, and smartweeds growing in New York's Catskills. Provided are keys for identifying each plant to species by flowers, foliage, or winter buds. A line drawing accompanies a summary of basic data…

  14. A bijection between phylogenetic trees and plane oriented recursive trees

    OpenAIRE

    Prodinger, Helmut

    2017-01-01

    Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the respective representations a 2-partitions and trapezoidal words.

  15. What's in a Name

    Science.gov (United States)

    Bush, Sarah B.; Albanese, Judith; Karp, Karen S.

    2016-01-01

    Historically, some baby names have been more popular during a specific time span, whereas other names are considered timeless. The Internet article, "How to Tell Someone's Age When All You Know Is Her Name" (Silver and McCann 2014), describes the phenomenon of the rise and fall of name popularity, which served as a catalyst for the…

  16. Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

    Directory of Open Access Journals (Sweden)

    Kyle Dexter

    2016-09-01

    Full Text Available Amazonian tree species vary enormously in their total abundance and range size, while Amazonian tree genera vary greatly in species richness. The drivers of this variation are not well understood. Here, we construct a phylogenetic hypothesis that represents half of Amazonian tree genera in order to contribute to explaining the variation. We find several clear, broad-scale patterns. Firstly, there is significant phylogenetic signal for all three characteristics; closely related genera tend to have similar numbers of species and similar mean range size and abundance. Additionally, the species richness of genera shows a significant, negative relationship with the mean range size and abundance of their constituent species. Our results suggest that phylogenetically correlated intrinsic factors, namely traits of the genera themselves, shape among lineage variation in range size, abundance and species richness. We postulate that tree stature may be one particularly relevant trait. However, other traits may also be relevant, and our study reinforces the need for ambitious compilations of trait data for Amazonian trees. In the meantime, our study shows how large-scale phylogenies can help to elucidate, and contribute to explaining, macroecological and macroevolutionary patterns in hyperdiverse, yet poorly understood regions like the Amazon Basin.

  17. Rate of tree carbon accumulation increases continuously with tree size

    Science.gov (United States)

    Stephenson, N.L.; Das, A.J.; Condit, R.; Russo, S.E.; Baker, P.J.; Beckman, N.G.; Coomes, D.A.; Lines, E.R.; Morris, W.K.; Rüger, N.; Álvarez, E.; Blundo, C.; Bunyavejchewin, S.; Chuyong, G.; Davies, S.J.; Duque, Á.; Ewango, C.N.; Flores, O.; Franklin, J.F.; Grau, H.R.; Hao, Z.; Harmon, M.E.; Hubbell, S.P.; Kenfack, D.; Lin, Y.; Makana, J.-R.; Malizia, A.; Malizia, L.R.; Pabst, R.J.; Pongpattananurak, N.; Su, S.-H.; Sun, I-F.; Tan, S.; Thomas, D.; van Mantgem, P.J.; Wang, X.; Wiser, S.K.; Zavala, M.A.

    2014-01-01

    Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle—particularly net primary productivity and carbon storage - increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree’s total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to understand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

  18. Degradation effects in the extraction of antioxidants from birch bark using water at elevated temperature and pressure.

    Science.gov (United States)

    Co, Michelle; Zettersten, Camilla; Nyholm, Leif; Sjöberg, Per J R; Turner, Charlotta

    2012-02-24

    Experiments with birch bark samples have been carried to enable a distinction between extraction and degradation effects during pressurised hot water extraction. Two samples, E80 and E180, contained birch bark extracts obtained after extraction at 80 and 180°C for up to 45 min, respectively. Two other samples, P80 and P180, were only extracted for 5 min at the two temperatures and were thereafter filtered and hydrothermally treated at 80 and 180°C, respectively. During the latter treatment, samples were collected at different times to assess the stability of the extracted compounds. An offline DPPH (2,2-diphenyl-1-picrylhydrazyl) assay, as well as a high performance liquid chromatographic separation coupled to an electrochemical detector, were used to determine the antioxidant capacity of the processed samples. The results obtained with the different techniques were compared to assess the yield of the extraction and degradation processes. In addition, an online hyphenated system comprising high performance liquid chromatography coupled to diode-array; electrochemical; and tandem mass spectrometric detection (HPLC-DAD-ECD-MS/MS) was used to study the compositions of the extracts in more detail. The results for the samples processed at 80°C showed that the extraction reached a steady-state already after 5 min, and that the extracted compounds were stable throughout the entire extraction process. Processing at 180°C, on the other hand, gave rise to partly degraded extracts with a multitude of peaks in both the diode array and electrochemical detectors, and a higher antioxidant capacity compared to for the extracts obtained at 80°C. It is concluded that HPLC-DAD-ECD is a more appropriate technique for the determination of antioxidants than the DPPH assay. The mass spectrometric results indicate that one of the extracted antioxidants, catechin, was isomerised to its diastereoisomers; (+)-catechin, (-)-catechin, (+)-epicatechin, and (-)-epicatechin. Copyright

  19. Changes in vegetation since the late glacial on peat bog in the Small Carpathians

    International Nuclear Information System (INIS)

    Ciernikova, M.

    2014-01-01

    Mires are ecosystems accumulating high amount of organic matter with preserved micro- and macro-fossils. Thus they can serve as natural archives allowing reconstruction of local vegetation and landscape development. Main aim of this study was to bring evidence of the whole Holocene history of mire birch woodland located on the ridge of the Male Karpaty Mts (SW Slovakia) using pollen analysis. One peat core was sampled from the middle part containing the whole Holocene sequence. The local development of study site started with small lake in a terrain depression, which arose at the end of the Late Glacial (Middle Dryas). The Late Glacial landscape was mosaic of birch-pine forests on suitable places and Artemisia steppes. Early Holocene is characterized by steep decline of pine and increase of Corylus and other mesophilous trees (Quercus, Tilia, Ulmus, Fraxinus). Fagus started dominate in middle Holocene (about 5000 cal BP). The recent vegetation established only several hundred years ago (ca 500 cal. BP), when birch started dominate. (author)

  20. Dictionary of Alaska place names

    Science.gov (United States)

    Orth, Donald J.

    1971-01-01

    This work is an alphabetical list of the geographic names that are now applied and have been applied to places and features of the Alaska landscape. Principal names, compiled from modem maps and charts and printed in boldface type, generally reflect present-day local usage. They conform to the principles of the U.S. Board on Geographic Names for establishing standard names for use on Government maps and in other Government publications. Each name entry gives the present-day spelling along with variant spellings and names; identifies the feature named; presents the origin and history of the name; and, where possible, gives the meaning of an Eskimo, Aleut, Indian, or foreign name. Variant, obsolete, and doubtful names are alphabetically listed and are cross referenced, where necessary, to the principal entries.

  1. Contributing factors in foliar uptake of dissolved inorganic nitrogen at leaf level

    Energy Technology Data Exchange (ETDEWEB)

    Wuyts, Karen, E-mail: karen.wuyts@uantwerpen.be [Laboratory of Environmental and Urban Ecology, Research Group ENdEMIC, Dept. Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Forest and Nature Lab (ForNaLab), Dept. Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, B-9090 Gontrode-Melle (Belgium); Adriaenssens, Sandy, E-mail: adriaenssens@irceline.be [Belgian Interregional Environment Agency (IRCEL-CELINE), Kunstlaan 10–11, B-1210 Brussels (Belgium); Staelens, Jeroen, E-mail: jeroen_staelens@yahoo.com [Flemish Environment Agency (VMM), Kronenburgstraat 45, B-2000 Antwerp (Belgium); Wuytack, Tatiana, E-mail: tatiana.wuytack@uantwerpen.be [Laboratory of Environmental and Urban Ecology, Research Group ENdEMIC, Dept. Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Van Wittenberghe, Shari, E-mail: shari.vanwittenberghe@uantwerpen.be [Laboratory of Environmental and Urban Ecology, Research Group ENdEMIC, Dept. Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Boeckx, Pascal, E-mail: pascal.boeckx@ugent.be [Isotope Bioscience Laboratory (ISOFYS), Dept. Applied Analytical and Physical Chemistry, Ghent University, Coupure Links 653, B-9000 Ghent (Belgium); Samson, Roeland, E-mail: roeland.samson@uantwerpen.be [Laboratory of Environmental and Urban Ecology, Research Group ENdEMIC, Dept. Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Verheyen, Kris, E-mail: kris.verheyen@ugent.be [Forest and Nature Lab (ForNaLab), Dept. Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, B-9090 Gontrode-Melle (Belgium)

    2015-02-01

    We investigated the influence of leaf traits, rainwater chemistry, and pedospheric nitrogen (N) fertilisation on the aqueous uptake of inorganic N by physiologically active tree leaves. Leaves of juvenile silver birch and European beech trees, supplied with NH{sub 4}NO{sub 3} to the soil at rates from 0 to 200 kg N ha{sup −1} y{sup −1}, were individually exposed to 100 μl of artificial rainwater containing {sup 15}NH{sub 4}{sup +} or {sup 15}NO{sub 3}{sup −} at two concentration levels for one hour. In the next vegetative period, the experiment was repeated with NH{sub 4}{sup +} at the highest concentration only. The N form and the N concentration in the applied rainwater and, to a lesser extent, the pedospheric N treatment and the leaf traits affected the aqueous foliar N uptake. The foliar uptake of NH{sub 4}{sup +} by birch increased when leaves were more wettable. High leaf N concentration and leaf mass per area enhanced the foliar N uptake, and NO{sub 3}{sup −} uptake in particular, by birch. Variation in the foliar N uptake by the beech trees could not be explained by the leaf traits considered. In the first experiment, N fertilisation stimulated the foliar N uptake in both species, which was on average 1.42–1.78 times higher at the highest soil N dose than at the zero dose. However, data variability was high and the effect was not appreciable in the second experiment. Our data suggest that next to rainwater chemistry (N form and concentration) also forest N status could play a role in the partitioning of N entering the ecosystem through the soil and the canopy. Models of canopy uptake of aqueous N at the leaf level should take account of leaf traits such as wettability and N concentration. - Highlights: • Foliar uptake of dissolved inorganic nitrogen (N) by potted trees was studied. • Leaves were individually exposed to rainwater drops containing {sup 15}NH{sub 4}{sup +} or {sup 15}NO{sub 3}{sup −}. • Foliar N uptake efficiency depended on

  2. Response of a forest ecotone to ionizing radiation. Progress report, October 15, 1981-April 14, 1983

    International Nuclear Information System (INIS)

    Murphy, P.G.; Sharitz, R.R.

    1982-11-01

    Compositional and structural characteristics of three forest types, including aspen dominated, maple-birch dominated, and an intervening ecotone (midecotone), were studied before and after irradiation in northern Wisconsin. In all three areas, the density of seedlings at 10 m was greatly reduced within a year following the 1972 radiation event. Woody plants of tree stature were eliminated at 10 m in all three areas within two years of irradiation but by 1982 only the aspen area lacked plants in this size class. The low densities of young trees in the other two areas at 10 m were of successional species rather than the original species killed by radiation. In 1981 total leaf litter production was 42 and 61% below 1971 preirradiation levels at 10 m in the aspen and maple-birch areas, respectively. But at 10 m in the midecotone, it had increased, relative to 1971, by 23%. The ratio of shrub to tree leaf litter continues to decline as the heavily irradiated zone of all three areas continues to be recolonized by tree species and the canopy at 20 m continues to fill out. Our present studies emphasize the rate at which the three areas continue to be recolonized and the composition of the recolonizing flora, relative to the preirradiation forest. Influences of the successional shrub species within 10 m are of particular interest and are also under study

  3. Dynamic Event Tree advancements and control logic improvements

    International Nuclear Information System (INIS)

    Alfonsi, Andrea; Rabiti, Cristian; Mandelli, Diego; Sen, Ramazan Sonat; Cogliati, Joshua Joseph

    2015-01-01

    The RAVEN code has been under development at the Idaho National Laboratory since 2012. Its main goal is to create a multi-purpose platform for the deploying of all the capabilities needed for Probabilistic Risk Assessment, uncertainty quantification, data mining analysis and optimization studies. RAVEN is currently equipped with three different sampling categories: Forward samplers (Monte Carlo, Latin Hyper Cube, Stratified, Grid Sampler, Factorials, etc.), Adaptive Samplers (Limit Surface search, Adaptive Polynomial Chaos, etc.) and Dynamic Event Tree (DET) samplers (Deterministic and Adaptive Dynamic Event Trees). The main subject of this document is to report the activities that have been done in order to: start the migration of the RAVEN/RELAP-7 control logic system into MOOSE, and develop advanced dynamic sampling capabilities based on the Dynamic Event Tree approach. In order to provide to all MOOSE-based applications a control logic capability, in this Fiscal Year an initial migration activity has been initiated, moving the control logic system, designed for RELAP-7 by the RAVEN team, into the MOOSE framework. In this document, a brief explanation of what has been done is going to be reported. The second and most important subject of this report is about the development of a Dynamic Event Tree (DET) sampler named 'Hybrid Dynamic Event Tree' (HDET) and its Adaptive variant 'Adaptive Hybrid Dynamic Event Tree' (AHDET). As other authors have already reported, among the different types of uncertainties, it is possible to discern two principle types: aleatory and epistemic uncertainties. The classical Dynamic Event Tree is in charge of treating the first class (aleatory) uncertainties; the dependence of the probabilistic risk assessment and analysis on the epistemic uncertainties are treated by an initial Monte Carlo sampling (MCDET). From each Monte Carlo sample, a DET analysis is run (in total, N trees). The Monte Carlo employs a pre

  4. Effects of elevated CO2 leaf diet on gypsy moth (Lepidoptera: Lymantriidae) respiration rates

    Science.gov (United States)

    Anita R. Foss; William J. Mattson; Terry M. Trier

    2013-01-01

    Elevated levels of CO2 affect plant growth and leaf chemistry, which in turn can alter host plant suitability for insect herbivores. We examined the suitability of foliage from trees grown from seedlings since 1997 at Aspen FACE as diet for the gypsy moth (Lymantria dispar L.) Lepidoptera: Lymantriidae: paper birch (...

  5. Late glacial vegetation development in Denmark – new evidence based on macrofossil and pollen from Slotseng, a small-scale site in southern Jutland

    DEFF Research Database (Denmark)

    Mortensen, Morten Fischer; Birks, Hilary H.; Christensen, Charlie

    2011-01-01

    that the period was relatively dry. In the Allerød period the Dryas-B. nana vegetation was initially replaced by an open Salix and grass dominated vegetation and some 400 years later, the first tree birches were documented presumably occupying moist and sheltered soils while drier land remained open...

  6. IcyTree: rapid browser-based visualization for phylogenetic trees and networks.

    Science.gov (United States)

    Vaughan, Timothy G

    2017-08-01

    IcyTree is an easy-to-use application which can be used to visualize a wide variety of phylogenetic trees and networks. While numerous phylogenetic tree viewers exist already, IcyTree distinguishes itself by being a purely online tool, having a responsive user interface, supporting phylogenetic networks (ancestral recombination graphs in particular), and efficiently drawing trees that include information such as ancestral locations or trait values. IcyTree also provides intuitive panning and zooming utilities that make exploring large phylogenetic trees of many thousands of taxa feasible. IcyTree is a web application and can be accessed directly at http://tgvaughan.github.com/icytree . Currently supported web browsers include Mozilla Firefox and Google Chrome. IcyTree is written entirely in client-side JavaScript (no plugin required) and, once loaded, does not require network access to run. IcyTree is free software, and the source code is made available at http://github.com/tgvaughan/icytree under version 3 of the GNU General Public License. tgvaughan@gmail.com. © The Author(s) 2017. Published by Oxford University Press.

  7. Spatial pattern of tree diversity and evenness across forest types in Majella National Park, Italy

    Directory of Open Access Journals (Sweden)

    Mohammad Redowan

    2015-09-01

    Full Text Available Background Estimation of tree diversity at broader scale is important for conservation planning. Tree diversity should be measured and understood in terms of diversity and evenness, two integral components to describe the structure of a biological community. Variation of the tree diversity and evenness with elevation, topographic relief, aspect, terrain shape, slope, soil nutrient, solar radiation etc. are well documented. Methods Present study explores the variation of tree diversity (measured as Shannon diversity and evenness indices of Majella National Park, Italy with five available forest types namely evergreen oak woods, deciduous oak woods, black/aleppo pine stands, hop-hornbeam forest and beech forest, using satellite, environmental and field data. Results Hop-hornbeam forest was found to be most diverse and even while evergreen Oak woods was the lowest diverse and even. Diversity and evenness of forest types were concurrent to each other i.e. forest type which was more diverse was also more even. As a broad pattern, majority portion of the study area belonged to medium diversity and high evenness class. Conclusions Satellite images and other GIS data proved useful tools in monitoring variation of tree diversity and evenness across various forest types. Present study findings may have implications in prioritizing conservation zones of high tree diversity at Majella.

  8. Combining evolutionary algorithms with oblique decision trees to detect bent-double galaxies

    Science.gov (United States)

    Cantu-Paz, Erick; Kamath, Chandrika

    2000-10-01

    Decision tress have long been popular in classification as they use simple and easy-to-understand tests at each node. Most variants of decision trees test a single attribute at a node, leading to axis- parallel trees, where the test results in a hyperplane which is parallel to one of the dimensions in the attribute space. These trees can be rather large and inaccurate in cases where the concept to be learned is best approximated by oblique hyperplanes. In such cases, it may be more appropriate to use an oblique decision tree, where the decision at each node is a linear combination of the attributes. Oblique decision trees have not gained wide popularity in part due to the complexity of constructing good oblique splits and the tendency of existing splitting algorithms to get stuck in local minima. Several alternatives have been proposed to handle these problems including randomization in conjunction wiht deterministic hill-climbing and the use of simulated annealing. In this paper, we use evolutionary algorithms (EAs) to determine the split. EAs are well suited for this problem because of their global search properties, their tolerance to noisy fitness evaluations, and their scalability to large dimensional search spaces. We demonstrate our technique on a synthetic data set, and then we apply it to a practical problem from astronomy, namely, the classification of galaxies with a bent-double morphology. In addition, we describe our experiences with several split evaluation criteria. Our results suggest that, in some cases, the evolutionary approach is faster and more accurate than existing oblique decision tree algorithms. However, for our astronomical data, the accuracy is not significantly different than the axis-parallel trees.

  9. BASALIT trial: double-blind placebo-controlled allergen immunotherapy with rBet v 1-FV in birch-related soya allergy.

    Science.gov (United States)

    Treudler, R; Franke, A; Schmiedeknecht, A; Ballmer-Weber, B; Worm, M; Werfel, T; Jappe, U; Biedermann, T; Schmitt, J; Brehler, R; Kleinheinz, A; Kleine-Tebbe, J; Brüning, H; Ruëff, F; Ring, J; Saloga, J; Schäkel, K; Holzhauser, T; Vieths, S; Simon, J C

    2017-08-01

    Conflicting results exist on the effect of allergen immunotherapy (AIT) on pollen-related food allergy. We aimed to investigate the efficacy of one-year AIT with the folding variant (FV) of recombinant (r) Bet v 1 on birch-related soya allergy. Of 138 subjects with Bet v 1 sensitization, 82 were positive at double-blind placebo-controlled food challenge (DBPCFC) with soya. A total of 56 of 82 were randomized in the ratio of 2:1 (active: placebo). Per-protocol population (PPP) had received ≥150 μg of allergen or placebo preparation. lowest observed adverse effect levels (LOAEL), postinterventional occurrence of objective signs (objS) at any dose level, sIgE/IgG4 against Bet v 1 and Gly m 4. Between-group changes were investigated (ancova, Mann-Whitney U-test, Fisher exact test). Baseline characteristics including LOAELs were comparable in both groups with objS and subjS occurring in 82% and 95% of active (n = 38) vs 78% and 83% of placebo group (n = 18). After AIT, objS occurred in 24% and 47%, respectively. LOAEL group differences showed a beneficial tendency (P = 0.081) for LOAEL objective in PPP (30 active, 15 placebo). sIgG4 raised only in active group (Bet v 1: P = 0.054, Gly m 4: P = 0.037), and no relevant changes occurred for sIgE. Only 56% of the intended sample size was recruited. For the first time, we present data on the effect of rBet v 1-FV on birch-related soya allergy. rBet v 1-FV AIT induced significant immunogenic effects. Clinical assessment showed a tendency in favour of the active group but did not reach statistical significance. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  10. TreeScaper: Visualizing and Extracting Phylogenetic Signal from Sets of Trees.

    Science.gov (United States)

    Huang, Wen; Zhou, Guifang; Marchand, Melissa; Ash, Jeremy R; Morris, David; Van Dooren, Paul; Brown, Jeremy M; Gallivan, Kyle A; Wilgenbusch, Jim C

    2016-12-01

    Modern phylogenomic analyses often result in large collections of phylogenetic trees representing uncertainty in individual gene trees, variation across genes, or both. Extracting phylogenetic signal from these tree sets can be challenging, as they are difficult to visualize, explore, and quantify. To overcome some of these challenges, we have developed TreeScaper, an application for tree set visualization as well as the identification of distinct phylogenetic signals. GUI and command-line versions of TreeScaper and a manual with tutorials can be downloaded from https://github.com/whuang08/TreeScaper/releases TreeScaper is distributed under the GNU General Public License. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  11. Directory of awardee names

    Energy Technology Data Exchange (ETDEWEB)

    1999-07-01

    Standardization of grant and contract awardee names has been an area of concern since the development of the Department`s Procurement and Assistance Data System (PADS). A joint effort was begun in 1983 by the Office of Scientific and Technical Information (OSTI) and the Office of Procurement and Assistance Management/Information Systems and Analysis Division to develop a means for providing uniformity of awardee names. As a result of this effort, a method of assigning vendor identification codes to each unique awardee name, division, city, and state combination was developed and is maintained by OSTI. Changes to vendor identification codes or awardee names contained in PADS can be made only by OSTI. Awardee names in the Directory indicate that the awardee has had a prime contract (excluding purchase orders of $10,000 or less) with, or a financial assistance award from, the Department. Award status--active, inactive, or retired--is not shown. The Directory is in alphabetic sequence based on awardee name and reflects the OSTI-assigned vendor identification code to the right of the name. A vendor identification code is assigned to each unique awardee name, division, city, and state (for place of performance). The same vendor identification code is used for awards throughout the Department.

  12. Spatial prediction of landslides using a hybrid machine learning approach based on Random Subspace and Classification and Regression Trees

    Science.gov (United States)

    Pham, Binh Thai; Prakash, Indra; Tien Bui, Dieu

    2018-02-01

    A hybrid machine learning approach of Random Subspace (RSS) and Classification And Regression Trees (CART) is proposed to develop a model named RSSCART for spatial prediction of landslides. This model is a combination of the RSS method which is known as an efficient ensemble technique and the CART which is a state of the art classifier. The Luc Yen district of Yen Bai province, a prominent landslide prone area of Viet Nam, was selected for the model development. Performance of the RSSCART model was evaluated through the Receiver Operating Characteristic (ROC) curve, statistical analysis methods, and the Chi Square test. Results were compared with other benchmark landslide models namely Support Vector Machines (SVM), single CART, Naïve Bayes Trees (NBT), and Logistic Regression (LR). In the development of model, ten important landslide affecting factors related with geomorphology, geology and geo-environment were considered namely slope angles, elevation, slope aspect, curvature, lithology, distance to faults, distance to rivers, distance to roads, and rainfall. Performance of the RSSCART model (AUC = 0.841) is the best compared with other popular landslide models namely SVM (0.835), single CART (0.822), NBT (0.821), and LR (0.723). These results indicate that performance of the RSSCART is a promising method for spatial landslide prediction.

  13. Flowering Trees

    Indian Academy of Sciences (India)

    IAS Admin

    Flowering Trees. Ailanthus excelsa Roxb. (INDIAN TREE OF. HEAVEN) of Simaroubaceae is a lofty tree with large pinnately compound alternate leaves, which are ... inflorescences, unisexual and greenish-yellow. Fruits are winged, wings many-nerved. Wood is used in making match sticks. 1. Male flower; 2. Female flower.

  14. Kinetic modeling of multi-feed simultaneous saccharification and co-fermentation of pretreated birch to ethanol.

    Science.gov (United States)

    Wang, Ruifei; Koppram, Rakesh; Olsson, Lisbeth; Franzén, Carl Johan

    2014-11-01

    Fed-batch simultaneous saccharification and fermentation (SSF) is a feasible option for bioethanol production from lignocellulosic raw materials at high substrate concentrations. In this work, a segregated kinetic model was developed for simulation of fed-batch simultaneous saccharification and co-fermentation (SSCF) of steam-pretreated birch, using substrate, enzymes and cell feeds. The model takes into account the dynamics of the cellulase-cellulose system and the cell population during SSCF, and the effects of pre-cultivation of yeast cells on fermentation performance. The model was cross-validated against experiments using different feed schemes. It could predict fermentation performance and explain observed differences between measured total yeast cells and dividing cells very well. The reproducibility of the experiments and the cell viability were significantly better in fed-batch than in batch SSCF at 15% and 20% total WIS contents. The model can be used for simulation of fed-batch SSCF and optimization of feed profiles. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. Changes in composition, structure and aboveground biomass over seventy-six years (1930-2006) in the Black Rock Forest, Hudson Highlands, southeastern New York State.

    Science.gov (United States)

    Schuster, W S F; Griffin, K L; Roth, H; Turnbull, M H; Whitehead, D; Tissue, D T

    2008-04-01

    We sought to quantify changes in tree species composition, forest structure and aboveground forest biomass (AGB) over 76 years (1930-2006) in the deciduous Black Rock Forest in southeastern New York, USA. We used data from periodic forest inventories, published floras and a set of eight long-term plots, along with species-specific allometric equations to estimate AGB and carbon content. Between the early 1930s and 2000, three species were extirpated from the forest (American elm (Ulmus americana L.), paper birch (Betula papyrifera Marsh.) and black spruce (Picea mariana (nigra) (Mill.) BSP)) and seven species invaded the forest (non-natives tree-of-heaven (Ailanthus altissima (Mill.) Swingle) and white poplar (Populus alba L.) and native, generally southerly distributed, southern catalpa (Catalpa bignonioides Walt.), cockspur hawthorn (Crataegus crus-galli L.), red mulberry (Morus rubra L.), eastern cottonwood (Populus deltoides Bartr.) and slippery elm (Ulmus rubra Muhl.)). Forest canopy was dominated by red oak and chestnut oak, but the understory tree community changed substantially from mixed oak-maple to red maple-black birch. Density decreased from an average of 1500 to 735 trees ha(-1), whereas basal area doubled from less than 15 m(2) ha(-1) to almost 30 m(2) ha(-1) by 2000. Forest-wide mean AGB from inventory data increased from about 71 Mg ha(-1) in 1930 to about 145 Mg ha(-1) in 1985, and mean AGB on the long-term plots increased from 75 Mg ha(-1) in 1936 to 218 Mg ha(-1) in 1998. Over 76 years, red oak (Quercus rubra L.) canopy trees stored carbon at about twice the rate of similar-sized canopy trees of other species. However, there has been a significant loss of live tree biomass as a result of canopy tree mortality since 1999. Important constraints on long-term biomass increment have included insect outbreaks and droughts.

  16. Why do trees die? Characterizing the drivers of background tree mortality

    Science.gov (United States)

    Das, Adrian J.; Stephenson, Nathan L.; Davis, Kristin P.

    2016-01-01

    The drivers of background tree mortality rates—the typical low rates of tree mortality found in forests in the absence of acute stresses like drought—are central to our understanding of forest dynamics, the effects of ongoing environmental changes on forests, and the causes and consequences of geographical gradients in the nature and strength of biotic interactions. To shed light on factors contributing to background tree mortality, we analyzed detailed pathological data from 200,668 tree-years of observation and 3,729 individual tree deaths, recorded over a 13-yr period in a network of old-growth forest plots in California's Sierra Nevada mountain range. We found that: (1) Biotic mortality factors (mostly insects and pathogens) dominated (58%), particularly in larger trees (86%). Bark beetles were the most prevalent (40%), even though there were no outbreaks during the study period; in contrast, the contribution of defoliators was negligible. (2) Relative occurrences of broad classes of mortality factors (biotic, 58%; suppression, 51%; and mechanical, 25%) are similar among tree taxa, but may vary with tree size and growth rate. (3) We found little evidence of distinct groups of mortality factors that predictably occur together on trees. Our results have at least three sets of implications. First, rather than being driven by abiotic factors such as lightning or windstorms, the “ambient” or “random” background mortality that many forest models presume to be independent of tree growth rate is instead dominated by biotic agents of tree mortality, with potentially critical implications for forecasting future mortality. Mechanistic models of background mortality, even for healthy, rapidly growing trees, must therefore include the insects and pathogens that kill trees. Second, the biotic agents of tree mortality, instead of occurring in a few predictable combinations, may generally act opportunistically and with a relatively large degree of independence from

  17. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Gyrocarpus americanus Jacq. (Helicopter Tree) of Hernandiaceae is a moderate size deciduous tree that grows to about 12 m in height with a smooth, shining, greenish-white bark. The leaves are ovate, rarely irregularly ... flowers which are unpleasant smelling. Fruit is a woody nut with two long thin wings.

  18. Marine Place Names

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains the geographic place names for features in the U.S territorial waters and outer continental shelf. These names can be used to find or define a...

  19. By which name should I call thee? The consequences of having multiple names.

    Science.gov (United States)

    Stevenage, Sarah V; Lewis, Hugh G

    2005-11-01

    The nominal competitor effect suggests that, when a person has two names associated with them, recall of either name is more difficult than if they just had one name. Drawing on a connectionist framework, this effect could arise either if multiple names were represented as being connected to a single person identity node (PIN), or if multiple names were represented as being connected via one-to-one links to multiple PINs. Whilst the latter has intuitive appeal, results from two experiments support the former architecture. Having two names connected to a single PIN not only gives rise to a nominal competitor effect (Experiment 1), but also gives rise to a familiarity enhancement effect (Experiment 2). These empirical results are simulated using an extension of Brédart, Valentine, Calder, and Gassi's (1995) connectionist architecture, which reveals that both effects hold even when the association of both names to the PIN is unequal. These results are presented in terms of a more complete model for person recognition, and the representation of semantic information within such a model is examined.

  20. Cache-Oblivious Search Trees via Binary Trees of Small Height

    DEFF Research Database (Denmark)

    Brodal, G.S.; Fagerberg, R.; Jacob, R.

    2002-01-01

    We propose a version of cache oblivious search trees which is simpler than the previous proposal of Bender, Demaine and Farach-Colton and has the same complexity bounds. In particular, our data structure avoids the use of weight balanced B-trees, and can be implemented as just a single array......, and range queries in worst case O(logB n + k/B) memory transfers, where k is the size of the output.The basic idea of our data structure is to maintain a dynamic binary tree of height log n+O(1) using existing methods, embed this tree in a static binary tree, which in turn is embedded in an array in a cache...... oblivious fashion, using the van Emde Boas layout of Prokop.We also investigate the practicality of cache obliviousness in the area of search trees, by providing an empirical comparison of different methods for laying out a search tree in memory....

  1. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Boswellia serrata Roxb. ex Colebr. (Indian Frankincense tree) of Burseraceae is a large-sized deciduous tree that is native to India. Bark is thin, greenish-ash-coloured that exfoliates into smooth papery flakes. Stem exudes pinkish resin ... Fruit is a three-valved capsule. A green gum-resin exudes from the ...

  2. Naming as Strategic Communication

    DEFF Research Database (Denmark)

    Schmeltz, Line; Kjeldsen, Anna Karina

    2016-01-01

    This article presents a framework for understanding corporate name change as strategic communication. From a corporate branding perspective, the choice of a new name can be seen as a wish to stand out from a group of similar organizations. Conversely, from an institutional perspective, name change...

  3. Systolic trees and systolic language recognition by tree automata

    Energy Technology Data Exchange (ETDEWEB)

    Steinby, M

    1983-01-01

    K. Culik II, J. Gruska, A. Salomaa and D. Wood have studied the language recognition capabilities of certain types of systolically operating networks of processors (see research reports Cs-81-32, Cs-81-36 and Cs-82-01, Univ. of Waterloo, Ontario, Canada). In this paper, their model for systolic VLSI trees is formalised in terms of standard tree automaton theory, and the way in which some known facts about recognisable forests and tree transductions can be applied in VLSI tree theory is demonstrated. 13 references.

  4. DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

    Science.gov (United States)

    Wehe, André; Bansal, Mukul S; Burleigh, J Gordon; Eulenstein, Oliver

    2008-07-01

    DupTree is a new software program for inferring rooted species trees from collections of gene trees using the gene tree parsimony approach. The program implements a novel algorithm that significantly improves upon the run time of standard search heuristics for gene tree parsimony, and enables the first truly genome-scale phylogenetic analyses. In addition, DupTree allows users to examine alternate rootings and to weight the reconciliation costs for gene trees. DupTree is an open source project written in C++. DupTree for Mac OS X, Windows, and Linux along with a sample dataset and an on-line manual are available at http://genome.cs.iastate.edu/CBL/DupTree

  5. Tree-, stand- and site-specific controls on landscape-scale patterns of transpiration

    Science.gov (United States)

    Kathrin Hassler, Sibylle; Weiler, Markus; Blume, Theresa

    2018-01-01

    Transpiration is a key process in the hydrological cycle, and a sound understanding and quantification of transpiration and its spatial variability is essential for management decisions as well as for improving the parameterisation and evaluation of hydrological and soil-vegetation-atmosphere transfer models. For individual trees, transpiration is commonly estimated by measuring sap flow. Besides evaporative demand and water availability, tree-specific characteristics such as species, size or social status control sap flow amounts of individual trees. Within forest stands, properties such as species composition, basal area or stand density additionally affect sap flow, for example via competition mechanisms. Finally, sap flow patterns might also be influenced by landscape-scale characteristics such as geology and soils, slope position or aspect because they affect water and energy availability; however, little is known about the dynamic interplay of these controls.We studied the relative importance of various tree-, stand- and site-specific characteristics with multiple linear regression models to explain the variability of sap velocity measurements in 61 beech and oak trees, located at 24 sites across a 290 km2 catchment in Luxembourg. For each of 132 consecutive days of the growing season of 2014 we modelled the daily sap velocity and derived sap flow patterns of these 61 trees, and we determined the importance of the different controls.Results indicate that a combination of mainly tree- and site-specific factors controls sap velocity patterns in the landscape, namely tree species, tree diameter, geology and aspect. For sap flow we included only the stand- and site-specific predictors in the models to ensure variable independence. Of those, geology and aspect were most important. Compared to these predictors, spatial variability of atmospheric demand and soil moisture explains only a small fraction of the variability in the daily datasets. However, the temporal

  6. Trees of Laos and Vietnam: a field guide to 100 economically or ecologically important species

    OpenAIRE

    Sam, Hoang Van; Nanthavong, Khamseng; Keßler, P.J.A.

    2004-01-01

    This field guide to 100 economically or ecologically important tree species from Laos and Vietnam enables the user to identify the included taxa with user-friendly keys. It includes scientific names, botanical descriptions of families, genera, and species. Specific information on distribution, habitat, ecology, and uses has been compiled. All specimens examined have been listed.

  7. What's in a Name? Sound Symbolism and Gender in First Names.

    Directory of Open Access Journals (Sweden)

    David M Sidhu

    Full Text Available Although the arbitrariness of language has been considered one of its defining features, studies have demonstrated that certain phonemes tend to be associated with certain kinds of meaning. A well-known example is the Bouba/Kiki effect, in which nonwords like bouba are associated with round shapes while nonwords like kiki are associated with sharp shapes. These sound symbolic associations have thus far been limited to nonwords. Here we tested whether or not the Bouba/Kiki effect extends to existing lexical stimuli; in particular, real first names. We found that the roundness/sharpness of the phonemes in first names impacted whether the names were associated with round or sharp shapes in the form of character silhouettes (Experiments 1a and 1b. We also observed an association between femaleness and round shapes, and maleness and sharp shapes. We next investigated whether this association would extend to the features of language and found the proportion of round-sounding phonemes was related to name gender (Analysis of Category Norms. Finally, we investigated whether sound symbolic associations for first names would be observed for other abstract properties; in particular, personality traits (Experiment 2. We found that adjectives previously judged to be either descriptive of a figuratively 'round' or a 'sharp' personality were associated with names containing either round- or sharp-sounding phonemes, respectively. These results demonstrate that sound symbolic associations extend to existing lexical stimuli, providing a new example of non-arbitrary mappings between form and meaning.

  8. Flowering Trees

    Indian Academy of Sciences (India)

    More Details Fulltext PDF. Volume 8 Issue 8 August 2003 pp 112-112 Flowering Trees. Zizyphus jujuba Lam. of Rhamnaceae · More Details Fulltext PDF. Volume 8 Issue 9 September 2003 pp 97-97 Flowering Trees. Moringa oleifera · More Details Fulltext PDF. Volume 8 Issue 10 October 2003 pp 100-100 Flowering Trees.

  9. Embedding complete ternary tree in hypercubes using AVL trees

    NARCIS (Netherlands)

    S.A. Choudum; I. Raman (Indhumathi)

    2008-01-01

    htmlabstractA complete ternary tree is a tree in which every non-leaf vertex has exactly three children. We prove that a complete ternary tree of height h, TTh, is embeddable in a hypercube of dimension . This result coincides with the result of [2]. However, in this paper, the embedding utilizes

  10. An evaluation of peat loss from an Everglades tree island, Florida, USA

    Directory of Open Access Journals (Sweden)

    S. Aich

    2014-03-01

    Full Text Available The tree islands of the Everglades are considered to be biodiversity “hotspots”, where the majority of terrestrial species of the Everglades are found. Drainage for agricultural and urban development in the early 1900s has had a severe impact, converting many of them into “ghost tree islands” which have lost most of their woody vegetation and much of their altitude (elevation. A survey conducted in 1973 on one of the prominent ghost tree islands, named “Dineen Island”, provides insights into the past. We compared the results of the 1973 survey with those of a survey conducted in 2009, in order to examine changes in Dineen Island that had taken place over 36 years and to provide information about general trends in the Everglades. Peat loss at Dineen Island was roughly 4 mm yr-1. This subsidence, as a consequence of peat loss, has been accompanied by losses in nitrogen and phosphorus of 234 and 2.5 metric tons (4.5 and 0.05 metric tons per hectare, respectively. As many of the Everglades tree islands have been lost from the landscape due to historical water management practices, quantifying nutrient losses from this ecosystem may be useful in helping to predict non-anthropogenic nutrient biogeochemistry shifts in Everglades oligotrophy.

  11. Trees are good, but…

    Science.gov (United States)

    E.G. McPherson; F. Ferrini

    2010-01-01

    We know that “trees are good,” and most people believe this to be true. But if this is so, why are so many trees neglected, and so many tree wells empty? An individual’s attitude toward trees may result from their firsthand encounters with specific trees. Understanding how attitudes about trees are shaped, particularly aversion to trees, is critical to the business of...

  12. Multiple-purpose trees for pastoral farming in New Zealand: with emphasis on tree legumes. [Lucerne Tree: Medick Tree

    Energy Technology Data Exchange (ETDEWEB)

    Davies, D J.G.; Macfarlane, R P

    1979-01-01

    The potential for soil conservation and agroforestry of several native and exotic legumes is discussed. Flowering period, chemical composition of leaves/pods, hardiness to frost and drought, timber value, forage potential for livestock and bees, ornamental value and other products are tabulated with information on up to 38 species. Two low-growing species that have proved useful for slope stabilization as well as forage are tree lucerne (Cytisus palmensis) and tree medick (Medicago arborea), the latter being shrubby and more suitable for cold districts. Gleditsia triacanthos is recommended as a shade and fodder tree for farm pasture.

  13. A hybrid 3D spatial access method based on quadtrees and R-trees for globe data

    Science.gov (United States)

    Gong, Jun; Ke, Shengnan; Li, Xiaomin; Qi, Shuhua

    2009-10-01

    3D spatial access method for globe data is very crucial technique for virtual earth. This paper presents a brand-new maintenance method to index 3d objects distributed on the whole surface of the earth, which integrates the 1:1,000,000- scale topographic map tiles, Quad-tree and R-tree. Furthermore, when traditional methods are extended into 3d space, the performance of spatial index deteriorates badly, for example 3D R-tree. In order to effectively solve this difficult problem, a new algorithm of dynamic R-tree is put forward, which includes two sub-procedures, namely node-choosing and node-split. In the node-choosing algorithm, a new strategy is adopted, not like the traditional mode which is from top to bottom, but firstly from bottom to top then from top to bottom. This strategy can effectively solve the negative influence of node overlap. In the node-split algorithm, 2-to-3 split mode substitutes the traditional 1-to-2 mode, which can better concern the shape and size of nodes. Because of the rational tree shape, this R-tree method can easily integrate the concept of LOD. Therefore, it will be later implemented in commercial DBMS and adopted in time-crucial 3d GIS system.

  14. Penerapan Algoritma Decision Tree C4.5 Untuk Penilaian Rumah Tinggal

    OpenAIRE

    Setiadi, Budi

    2015-01-01

    There is still a possibility of assessment error homes as a reference value of credit, which will open opportunities for NPL. So we need a way of assessment (predictive value) is quite proportional, credible and accurate. Inaccurate predictions led to the planning of improper credit management. Prediction value of collateral house has attracted the interest of many researchers because of its importance both in theoretical andempirical.Namely C4.5 decision tree algorithm, CART and CHAID that c...

  15. Observing of tree trunks and other cylindrical objects using GPR

    Science.gov (United States)

    Jezova, Jana; Lambot, Sebastien

    2016-04-01

    Trees are a part of our everyday life, hence it is important to prevent their collapse to protect people and urban infrastructures. It is also important to characterize tree wood properties for usages in construction. In order to investigate internal parts of tree trunks non-invasively, ground-penetrating radar (GPR), or in this case, ultra-wideband microwave radar as a general tool, appears to be a very promising technology. Nevertheless, tree trunk tomography using microwave radar is a complicated task due to the circular shape of the trunk and the very complex (heterogeneous and anisotropic) internal structures of the trunk. Microwave sensing of tree trunks is also complicated due to the electromagnetic properties of living wood, which strongly depend on water content, density and temperature of wood. The objective of this study is to describe tree trunk radar cross sections including specific features originating from the particular circumferential data acquisition geometry. In that respect, three experiments were performed: (1) numerical simulations using a finite-difference time-domain software, namely, gprMax 2D, (2) measurements on a simplified laboratory trunk model including plastic and cardboard pipes, sand and air, and (3) measurements over a real tree trunk. The analysis was further deepened by considering: (1) common zero-offset reflection imaging, (2) imaging with a planar perfect electrical conductor (PEC) at the opposite side of the trunk, and (3) imaging with a PEC arc at the opposite side of the trunk. Furthermore, the shape of the reflection curve of a cylindrical target was analytically derived based on the straight-ray propagation approximation. Subsequently, the total internal reflection (TIR) phenomenon occurring in cylindrical objects was observed and analytically described. Both the straight-ray reflection curve and TIR were well observed on the simulated and laboratory radar data. A comparison between all experiments and radar

  16. Multi-language naming game

    Science.gov (United States)

    Zhou, Jianfeng; Lou, Yang; Chen, Guanrong; Tang, Wallace K. S.

    2018-04-01

    Naming game is a simulation-based experiment used to study the evolution of languages. The conventional naming game focuses on a single language. In this paper, a novel naming game model named multi-language naming game (MLNG) is proposed, where the agents are different-language speakers who cannot communicate with each other without a translator (interpreter) in between. The MLNG model is general, capable of managing k different languages with k ≥ 2. For illustration, the paper only discusses the MLNG with two different languages, and studies five representative network topologies, namely random-graph, WS small-world, NW small-world, scale-free, and random-triangle topologies. Simulation and analysis results both show that: 1) using the network features and based on the proportion of translators the probability of establishing a conversation between two or three agents can be theoretically estimated; 2) the relationship between the convergence speed and the proportion of translators has a power-law-like relation; 3) different agents require different memory sizes, thus a local memory allocation rule is recommended for saving memory resources. The new model and new findings should be useful for further studies of naming games and for better understanding of languages evolution from a dynamical network perspective.

  17. Shedding light on tree growth : ring analysis of juvenile tropical trees

    NARCIS (Netherlands)

    Soliz Gamboa, C.C.

    2010-01-01

    In the understory of tropical forests light is believed to be the main limiting growth factor for the newly established trees. Trees growing in shade of the understory may experience periods of slow radial growth. It is expected that gaps created by tree or branch fall will provoke tree growth

  18. Evolutionary trees and the rise of modern primatology: the forgotten contribution of St. George Mivart.

    Science.gov (United States)

    Bigoni, Francesca; Barsanti, Giulio

    2011-01-01

    The modern concept of the tree of life originated as a popular, iconic synthesis of the Darwinian evolutionary theory of descent by modification even if Darwin's own trees were hypothetical and abstract. It is generally thought that Ernst Haeckel in 1866 was the first to publish a true evolutionary tree which showed actual taxa. It is apparently forgotten that St. George Mivart beginning in 1865 made significant contributions to the development of evolutionary based trees of life which dealt with primate evolution, including human phylogeny. His trees were built on the most extensive sets of original data published up to that time, and were clearly articulated as working hypotheses. Mivart's trees were surprisingly modern for appearance and for content. Not only are most taxonomic names still in use today, but also many of the issues he raised are still under discussion in current scientific literature. The history of biology and especially that of primatology in the 19th century can benefit from a more thorough knowledge of how the image of the tree was used in scientific writings, especially after Darwin in the context of the theory of evolution by descent from common ancestors. A reappraisal of Mivart's scientific achievements is necessary to better establish the origins and the development not only of evolutionary trees but of modern primatology. The history of primatology, a discipline that is fundamental for investigating the place of humans in nature, would also benefit from a reappraisal of Mivart's role in Victorian biology.

  19. Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

    Science.gov (United States)

    2013-01-01

    Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

  20. Deciphering structural and temporal interplays during the architectural development of mango trees.

    Science.gov (United States)

    Dambreville, Anaëlle; Lauri, Pierre-Éric; Trottier, Catherine; Guédon, Yann; Normand, Frédéric

    2013-05-01

    Plant architecture is commonly defined by the adjacency of organs within the structure and their properties. Few studies consider the effect of endogenous temporal factors, namely phenological factors, on the establishment of plant architecture. This study hypothesized that, in addition to the effect of environmental factors, the observed plant architecture results from both endogenous structural and temporal components, and their interplays. Mango tree, which is characterized by strong phenological asynchronisms within and between trees and by repeated vegetative and reproductive flushes during a growing cycle, was chosen as a plant model. During two consecutive growing cycles, this study described vegetative and reproductive development of 20 trees submitted to the same environmental conditions. Four mango cultivars were considered to assess possible cultivar-specific patterns. Integrative vegetative and reproductive development models incorporating generalized linear models as components were built. These models described the occurrence, intensity, and timing of vegetative and reproductive development at the growth unit scale. This study showed significant interplays between structural and temporal components of plant architectural development at two temporal scales. Within a growing cycle, earliness of bud burst was highly and positively related to earliness of vegetative development and flowering. Between growing cycles, flowering growth units delayed vegetative development compared to growth units that did not flower. These interplays explained how vegetative and reproductive phenological asynchronisms within and between trees were generated and maintained. It is suggested that causation networks involving structural and temporal components may give rise to contrasted tree architectures.

  1. Trees

    Science.gov (United States)

    Al-Khaja, Nawal

    2007-01-01

    This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

  2. Combination treatment of elevated UVB radiation, CO2 and temperature has little effect on silver birch (Betula pendula) growth and phytochemistry.

    Science.gov (United States)

    Lavola, Anu; Nybakken, Line; Rousi, Matti; Pusenius, Jyrki; Petrelius, Mari; Kellomäki, Seppo; Julkunen-Tiitto, Riitta

    2013-12-01

    Elevations of carbon dioxide, temperature and ultraviolet-B (UBV) radiation in the growth environment may have a high impact on the accumulation of carbon in plants, and the different factors may work in opposite directions or induce additive effects. To detect the changes in the growth and phytochemistry of silver birch (Betula pendula) seedlings, six genotypes were exposed to combinations of ambient or elevated levels of CO2 , temperature and UVB radiation in top-closed chambers for 7 weeks. The genotypes were relatively similar in their responses, and no significant interactive effects of three-level climate factors on the measured parameters were observed. Elevated UVB had no effect on growth, nor did it alter plant responses to CO2 and/or temperature in combined treatments. Growth in all plant parts increased under elevated CO2 , and height and stem biomass increased under elevated temperature. Increased carbon distribution to biomass did not reduce its allocation to phytochemicals: condensed tannins, most flavonols and phenolic acids accumulated under elevated CO2 and elevated UVB, but this effect disappeared under elevated temperature. Leaf nitrogen content decreased under elevated CO2 . We conclude that, as a result of high genetic variability in phytochemicals, B. pendula seedlings have potential to adapt to the tested environmental changes. The induction in protective flavonoids under UVB radiation together with the positive impact of elevated CO2 and temperature mitigates possible UVB stress effects, and thus atmospheric CO2 concentration and temperature are the climate change factors that will dictate the establishment and success of birch at higher altitudes in the future. © 2013 Scandinavian Plant Physiology Society.

  3. Interannual and seasonal dynamics, and the age, of nonstructural carbohydrate pools in the stemwood of temperate trees across a climatic gradient in New England

    Science.gov (United States)

    Richardson, A. D.; Carbone, M. S.; Czimczik, C. I.; Keenan, T. F.; Schaberg, P.; Xu, X.

    2011-12-01

    Like all plants, forest trees accumulate and store surplus mobile carbon (C) compounds as resources to be used to support future growth. This can be viewed as a bet-hedging strategy, providing reserves that the tree can draw on in times of stress-e.g., following disturbance, disease, or extreme climatic events. In the context of climate change, understanding factors influencing the availability of these stored C compounds to support growth and metabolism is essential for predicting the resilience of forests to environmental stress factors. We conducted this study to investigate the role of these stored C pools in the context ecosystem C balance at time scales from days to years. At quarterly intervals over a three year period, we monitored stemwood total nonstructural carbohydrate (TNC) concentrations of the dominant tree species of New England. Work was conducted at three sites along a climatic gradient: an oak-dominated transition hardwood forest (Harvard Forest), a maple-beech-birch northern hardwood forest (Bartlett Experimental Forest), and a spruce-fir forest (Howland Forest). We observed large differences among species both in TNC concentrations, and in how the TNC pool is partitioned to different compounds (starch, sucrose, glucose, fructose, raffinose, xylose and stachyose). Within a species, however, seasonal dynamics were remarkably similar across sites. The interannual variability in maximum TNC concentrations appears to be smaller than interannual variability in annual net ecosystem exchange of CO2. With an additional set of samples, we are using the bomb radiocarbon (14C) spike to estimate the average age of the sugars and starches in the TNC pool, and relating this to factors such as size, age, and recent growth rates of each tree. Initial results suggest that these TNC pools range in age from several years to several decades old. The average ages of starch and sugar pools are related, with the starches generally being older than sugars

  4. Drought-induced legacy effects in wood growth across the Eastern and Midwestern U.S. are mediated by site climate, tree age, and drought sensitivity

    Science.gov (United States)

    Kannenberg, S.; Maxwell, J. T.; Pederson, N.; D'Orangeville, L.; Phillips, R.

    2017-12-01

    While it is widely known that drought reduces carbon (C) uptake in temperate forests, tree growth can also remain stagnant post-drought despite favorable climatic conditions. While such "legacy effects" are well established, the degree to which these effects depend on species identity or variability in site conditions is poorly quantified. We sought to uncover how site, species, climate, and tree age interact to affect the presence and magnitude of legacy effects in temperate trees following drought. To do this, we assembled dendrochronological records of 18 common species across 94 sites in Eastern and Midwestern U.S. forests and quantified drought-induced changes in wood growth in the year of the drought (hereafter "drought sensitivity") and the years after the drought (i.e., legacy effects). We predicted that species particularly prone to hydraulic damage (e.g., oaks) would have the least drought sensitivity yet experience larger legacy effects, and that this effect would be exacerbated at arid sites. Across all species and sites, wood growth was reduced by 14% in the year of the drought and by 7% post-drought. Surprisingly, legacy effects were smaller for oak species and larger across species known to be more drought sensitive (e.g. tulip poplar, maple, birch). As a result, we observed a positive relationship between a species' drought sensitivity and that species' legacy effect. These legacy effects were similar in size across a range of drought severities. Surprisingly, legacy effects were smaller in more arid sites - contrary to previous investigations in dryland ecosystems - perhaps indicating the role of adaptation in mediating a tree's recovery from drought. In addition, many species actually decreased the size of their legacy effects as they aged, despite no change in drought responses. Our results run contrary to our predictions, as species with the greatest drought sensitivity had the least ability to recover, and that younger mesic forests- not arid

  5. Socioeconomic determinants of first names

    NARCIS (Netherlands)

    Bloothooft, G.; Onland, D.

    2011-01-01

    Modern naming practices in the Netherlands between 1982 and 2005 were studied on the basis of 1409 popular first names, divided into fourteen name groups determined by the common preferences of parents for the names involved. Socioeconomic variables such as family income, parents' level of

  6. The major birch pollen allergen Bet v 1 induces different responses in dendritic cells of birch pollen allergic and healthy individuals.

    Directory of Open Access Journals (Sweden)

    Ursula Smole

    Full Text Available Dendritic cells play a fundamental role in shaping the immune response to allergens. The events that lead to allergic sensitization or tolerance induction during the interaction of the major birch pollen allergen Bet v 1 and dendritic cells are not very well studied. Here, we analyzed the uptake of Bet v 1 and the cross-reactive celery allergen Api g 1 by immature monocyte-derived dendritic cells (iMoDCs of allergic and normal donors. In addition, we characterized the allergen-triggered intracellular signaling and transcriptional events. Uptake kinetics, competitive binding, and internalization pathways of labeled allergens by iMoDCs were visualized by live-cell imaging. Surface-bound IgE was detected by immunofluorescence microscopy and flow cytometry. Allergen- and IgE-induced gene expression of early growth response genes and Th1 and Th2 related cytokines and chemokines were analyzed by real-time PCR. Phosporylation of signaling kinases was analyzed by Western blot. Internalization of Bet v 1 by iMoDCs of both donor groups, likely by receptor-mediated caveolar endocytosis, followed similar kinetics. Bet v 1 outcompeted Api g 1 in cell surface binding and uptake. MoDCs of allergic and healthy donors displayed surface-bound IgE and showed a pronounced upregulation of Th2 cytokine- and NFκB-dependent genes upon non-specific Fcε receptor cross-linking. In contrast to these IgE-mediated responses, Bet v 1-stimulation increased transcript levels of the Th2 cytokines IL-4 and IL-13 but not of NFκB-related genes in MoDCs of BP allergic donors. Cells of healthy donors were either unresponsive or showed elevated mRNA levels of Th1-promoting chemokines. Moreover, Bet v 1 was able to induce Erk1/2 and p38 MAPK activation in BP allergics but only a slight p38 activation in normal donors. In conclusion, our data indicate that Bet v 1 favors the activation of a Th2 program only in DCs of BP allergic individuals.

  7. Spectra of chemical trees

    International Nuclear Information System (INIS)

    Balasubramanian, K.

    1982-01-01

    A method is developed for obtaining the spectra of trees of NMR and chemical interests. The characteristic polynomials of branched trees can be obtained in terms of the characteristic polynomials of unbranched trees and branches by pruning the tree at the joints. The unbranched trees can also be broken down further until a tree containing just two vertices is obtained. The effectively reduces the order of the secular determinant of the tree used at the beginning to determinants of orders atmost equal to the number of vertices in the branch containing the largest number of vertices. An illustrative example of a NMR graph is given for which the 22 x 22 secular determinant is reduced to determinants of orders atmost 4 x 4 in just the second step of the algorithm. The tree pruning algorithm can be applied even to trees with no symmetry elements and such a factoring can be achieved. Methods developed here can be elegantly used to find if two trees are cospectral and to construct cospectral trees

  8. Elemental Etymology: What's in a Name?

    Science.gov (United States)

    Ball, David W.

    1985-01-01

    Examines the origin of the names (or etymologies) of the chemical elements. Includes tables listing elements: (1) with names of obscure origin; (2) named for colors; (3) named after real or mythical people; (4) named after places; (5) named after heavenly bodies; and (6) having names of miscellaneous origin. (JN)

  9. Preparation of activated carbons from olive-tree wood revisited. II. Physical activation with air

    Energy Technology Data Exchange (ETDEWEB)

    Ould-Idriss, A.; Cuerda-Correa, E.M.; Fernandez-Gonzalez, C.; Alexandre-Franco, M.F.; Gomez-Serrano, V. [Extremadura Univ., Badajoz (Spain). Dept. of Organic and Inorganic Chemistry; Stitou, M. [Univ. Abdelmalek Esaadi, Tetouan (Morocco). Dept. de Chimie; Macias-Garcia, A. [Extremadura Univ., Badajoz (Spain). Dept. of Mechanical, Energetic and Materials Engineering

    2011-02-15

    Olive-tree has been grown in the Mediterranean countries for centuries. For an adequate development of the tree it must be subjected to different treatments such as trimming, large amounts of a woody residue being produced. Such a residue has been traditionally used as a domestic fuel or simply burnt in the landfield. In both cases greenhouse gases are generated to a large extent. Thus, the preparation of activated carbons from olive-tree wood appears as an attractive alternative to valorize this by-product. Commonly, two activation strategies are used with such an aim, namely chemical and physical activation. In this study, the optimization of the physical activation method with air for the production of activated carbon has been analyzed. The results obtained clearly show that if the preparation conditions are adequately controlled, it is possible to prepare activated carbons showing tailored properties in terms of micro- or mesoporous texture and surface area. (author)

  10. Phase II Trial of Atezolizumab As First-Line or Subsequent Therapy for Patients With Programmed Death-Ligand 1-Selected Advanced Non-Small-Cell Lung Cancer (BIRCH).

    Science.gov (United States)

    Peters, Solange; Gettinger, Scott; Johnson, Melissa L; Jänne, Pasi A; Garassino, Marina C; Christoph, Daniel; Toh, Chee Keong; Rizvi, Naiyer A; Chaft, Jamie E; Carcereny Costa, Enric; Patel, Jyoti D; Chow, Laura Q M; Koczywas, Marianna; Ho, Cheryl; Früh, Martin; van den Heuvel, Michel; Rothenstein, Jeffrey; Reck, Martin; Paz-Ares, Luis; Shepherd, Frances A; Kurata, Takayasu; Li, Zhengrong; Qiu, Jiaheng; Kowanetz, Marcin; Mocci, Simonetta; Shankar, Geetha; Sandler, Alan; Felip, Enriqueta

    2017-08-20

    Purpose BIRCH was designed to examine the efficacy of atezolizumab, a humanized anti-programmed death-ligand 1 (PD-L1) monoclonal antibody, in advanced non-small-cell lung cancer (NSCLC) across lines of therapy. Patients were selected on the basis of PD-L1 expression on tumor cells (TC) or tumor-infiltrating immune cells (IC). Patients and Methods Eligible patients had advanced-stage NSCLC, no CNS metastases, and zero to two or more lines of prior chemotherapy. Patients whose tumors expressed PD-L1 using the SP142 immunohistochemistry assay on ≥ 5% of TC or IC (TC2/3 or IC2/3 [TC or IC ≥ 5% PD-L1-expressing cells, respectively]) were enrolled. Atezolizumab 1,200 mg was administered intravenously every 3 weeks. Efficacy-evaluable patients (N = 659) comprised three cohorts: first line (cohort 1; n = 139); second line (cohort 2; n = 268); and third line or higher (cohort 3; n = 252). The primary end point was independent review facility-assessed objective response rate (ORR; Response Evaluation Criteria in Solid Tumors [RECIST] version 1.1). Secondary end points included median duration of response, progression-free survival, and overall survival (OS). Results BIRCH met its primary objective of demonstrating a significant ORR versus historical controls. With a minimum of 12 months of follow-up, the independent review facility-assessed ORR was 18% to 22% for the three cohorts, and 26% to 31% for the TC3 or IC3 subgroup; most responses are ongoing. Responses occurred regardless of EGFR or KRAS mutation status. The median OS from an updated survival analysis (minimum of 20 month follow up) for cohort 1 was 23.5 months (26.9 months for TC3 or IC3 patients); the median OS in cohorts 2 and 3 was 15.5 and 13.2 months, respectively. The safety profile was similar across cohorts and consistent with previous atezolizumab monotherapy trials. Conclusion BIRCH demonstrated responses with atezolizumab monotherapy in patients with PD-L1-selected advanced NSCLC, with good

  11. Dynamic Event Tree advancements and control logic improvements

    Energy Technology Data Exchange (ETDEWEB)

    Alfonsi, Andrea [Idaho National Lab. (INL), Idaho Falls, ID (United States); Rabiti, Cristian [Idaho National Lab. (INL), Idaho Falls, ID (United States); Mandelli, Diego [Idaho National Lab. (INL), Idaho Falls, ID (United States); Sen, Ramazan Sonat [Idaho National Lab. (INL), Idaho Falls, ID (United States); Cogliati, Joshua Joseph [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2015-09-01

    The RAVEN code has been under development at the Idaho National Laboratory since 2012. Its main goal is to create a multi-purpose platform for the deploying of all the capabilities needed for Probabilistic Risk Assessment, uncertainty quantification, data mining analysis and optimization studies. RAVEN is currently equipped with three different sampling categories: Forward samplers (Monte Carlo, Latin Hyper Cube, Stratified, Grid Sampler, Factorials, etc.), Adaptive Samplers (Limit Surface search, Adaptive Polynomial Chaos, etc.) and Dynamic Event Tree (DET) samplers (Deterministic and Adaptive Dynamic Event Trees). The main subject of this document is to report the activities that have been done in order to: start the migration of the RAVEN/RELAP-7 control logic system into MOOSE, and develop advanced dynamic sampling capabilities based on the Dynamic Event Tree approach. In order to provide to all MOOSE-based applications a control logic capability, in this Fiscal Year an initial migration activity has been initiated, moving the control logic system, designed for RELAP-7 by the RAVEN team, into the MOOSE framework. In this document, a brief explanation of what has been done is going to be reported. The second and most important subject of this report is about the development of a Dynamic Event Tree (DET) sampler named “Hybrid Dynamic Event Tree” (HDET) and its Adaptive variant “Adaptive Hybrid Dynamic Event Tree” (AHDET). As other authors have already reported, among the different types of uncertainties, it is possible to discern two principle types: aleatory and epistemic uncertainties. The classical Dynamic Event Tree is in charge of treating the first class (aleatory) uncertainties; the dependence of the probabilistic risk assessment and analysis on the epistemic uncertainties are treated by an initial Monte Carlo sampling (MCDET). From each Monte Carlo sample, a DET analysis is run (in total, N trees). The Monte Carlo employs a pre-sampling of the

  12. TreePlus: interactive exploration of networks with enhanced tree layouts.

    Science.gov (United States)

    Lee, Bongshin; Parr, Cynthia S; Plaisant, Catherine; Bederson, Benjamin B; Veksler, Vladislav D; Gray, Wayne D; Kotfila, Christopher

    2006-01-01

    Despite extensive research, it is still difficult to produce effective interactive layouts for large graphs. Dense layout and occlusion make food webs, ontologies, and social networks difficult to understand and interact with. We propose a new interactive Visual Analytics component called TreePlus that is based on a tree-style layout. TreePlus reveals the missing graph structure with visualization and interaction while maintaining good readability. To support exploration of the local structure of the graph and gathering of information from the extensive reading of labels, we use a guiding metaphor of "Plant a seed and watch it grow." It allows users to start with a node and expand the graph as needed, which complements the classic overview techniques that can be effective at (but often limited to) revealing clusters. We describe our design goals, describe the interface, and report on a controlled user study with 28 participants comparing TreePlus with a traditional graph interface for six tasks. In general, the advantage of TreePlus over the traditional interface increased as the density of the displayed data increased. Participants also reported higher levels of confidence in their answers with TreePlus and most of them preferred TreePlus.

  13. Refining discordant gene trees.

    Science.gov (United States)

    Górecki, Pawel; Eulenstein, Oliver

    2014-01-01

    Evolutionary studies are complicated by discordance between gene trees and the species tree in which they evolved. Dealing with discordant trees often relies on comparison costs between gene and species trees, including the well-established Robinson-Foulds, gene duplication, and deep coalescence costs. While these costs have provided credible results for binary rooted gene trees, corresponding cost definitions for non-binary unrooted gene trees, which are frequently occurring in practice, are challenged by biological realism. We propose a natural extension of the well-established costs for comparing unrooted and non-binary gene trees with rooted binary species trees using a binary refinement model. For the duplication cost we describe an efficient algorithm that is based on a linear time reduction and also computes an optimal rooted binary refinement of the given gene tree. Finally, we show that similar reductions lead to solutions for computing the deep coalescence and the Robinson-Foulds costs. Our binary refinement of Robinson-Foulds, gene duplication, and deep coalescence costs for unrooted and non-binary gene trees together with the linear time reductions provided here for computing these costs significantly extends the range of trees that can be incorporated into approaches dealing with discordance.

  14. MARKED PERSONAL NAMES: AN ANTROPONIMIC STUDY OF BALINESE STUDENTS’ NAMES IN DENPASAR

    Directory of Open Access Journals (Sweden)

    Ni Made Iwan Indrawan

    2015-07-01

    Full Text Available The research aims to account for the Marked Balinese Students’ Personal Names. Four research problems are studied, namely (1 the criteria used to distinguish the marked names (NDMBmk and the unmarked ones (NDMTBmk, (2 the functions of the markedness, (3 the factors that influence it, and (4 the ideologies that operate behind it. The markedness of personal names reflect a relation between the arbitrariness in language uses and the extralinguistic factors influencing it. In the context of Balinese, the tradition, legal practices, and the globalisation may affect the arbitrariness. In order to determine NDMBmk, criteria of markedness was constructed. According to the criteria, structurally, NDMBmk consist of at least five elements, as Anak Agung Arim Kasunu Arya Penarungan. Behaviorally, they may consist of names not derived from Balinese and/or Sanskrit, such as Giovani on I Gede Adeyaka Giovani, adopt a foreign spelling system as Chrisna on Ni Putu Chrisna Wulandari, or use no markers of Balinese ethnics or caste as Yunisari Wira Putri. Out of 698 sampled names, NDMBmk are found 54. Besides denoting, the marked elements also function to distinguish personal identities, to shape the existence of the name holder, to connote particular perception, and to reflect the changing era. The factors influencing the markedness are the need to express something new, a wish to acculturate, to raise status or keep a distance socially, and to demonstrate a linguistic expertise, or when seeing from the concept of imagery, the factors are the imagery on something new and on social status or distancing. The ideologies behind the phenomenon are globalist, nationalist, and the casteless-Balinese.

  15. MARKED PERSONAL NAMES: AN ANTROPONIMIC STUDY OF BALINESE STUDENTS’ NAMES IN DENPASAR

    Directory of Open Access Journals (Sweden)

    Ni Made Iwan Indrawan

    2012-07-01

    Full Text Available The research aims to account for the Marked Balinese Students’ Personal Names. Four research problems are studied, namely (1 the criteria used to distinguish the marked names (NDMBmk and the unmarked ones (NDMTBmk, (2 the functions of the markedness, (3 the factors that influence it, and (4 the ideologies that operate behind it. The markedness of personal names reflect a relation between the arbitrariness in language uses and the extralinguistic factors influencing it. In the context of Balinese, the tradition, legal practices, and the globalisation may affect the arbitrariness. In order to determine NDMBmk, criteria of markedness was constructed. According to the criteria, structurally, NDMBmk consist of at least five elements, as Anak Agung Arim Kasunu Arya Penarungan. Behaviorally, they may consist of names not derived from Balinese and/or Sanskrit, such as Giovani on I Gede Adeyaka Giovani, adopt a foreign spelling system as Chrisna on Ni Putu Chrisna Wulandari, or use no markers of Balinese ethnics or caste as Yunisari Wira Putri. Out of 698 sampled names, NDMBmk are found 54. Besides denoting, the marked elements also function to distinguish personal identities, to shape the existence of the name holder, to connote particular perception, and to reflect the changing era. The factors influencing the markedness are the need to express something new, a wish to acculturate, to raise status or keep a distance socially, and to demonstrate a linguistic expertise, or when seeing from the concept of imagery, the factors are the imagery on something new and on social status or distancing. The ideologies behind the phenomenon are globalist, nationalist, and the casteless-Balinese.

  16. Effects of soil temperature and elevated atmospheric CO2 concentration on gas exchange, in vivo carboxylation and chlorophyll fluorescence in jack pine and white birch seedlings

    International Nuclear Information System (INIS)

    Zhang, S.; Dang, Q-L.

    2005-01-01

    The interactive effects of soil temperature and elevated carbon dioxide on the photosynthetic functions of white birch and jack pine were investigated. Elevated carbon dioxide was found to significantly decrease the allocation of electron transport to photorespiration in both species by increasing electron allocation to Rubisco carboxylation. Photosynthetic down-regulation occurred in both species after four months in elevated carbon dioxide as evidenced by decreases in maximal carboxylation rate which were unaffected by soil temperature. 50 refs., 5 figs

  17. On identifying name equivalences in digital libraries. Name equivalence, Surname matching, Author identification, Databases

    Directory of Open Access Journals (Sweden)

    Dror G. Feitelson

    2004-01-01

    Full Text Available The services provided by digital libraries can be much improved by correctly identifying variants of the same name. For example, this will allow for better retrieval of all the works by a certain author. We focus on variants caused by abbreviations of first names, and show that significant achievements are possible by simple lexical analysis and comparison of names. This is done in two steps: first a pairwise matching of names is performed, and then these are used to find cliques of equivalent names. However, these steps can each be performed in a variety of ways. We therefore conduct an experimental analysis using two real datasets to find which approaches actually work well in practice. Interestingly, this depends on the size of the repository, as larger repositories may have many more similar names.

  18. Thomas Birch's 'Weekly Letter' (1741-66): correspondence and history in the mid-eighteenth-century Royal Society.

    Science.gov (United States)

    Ellis, Markman

    2014-09-20

    Thomas Birch (1705-66), Secretary of the Royal Society from 1752 to 1765, and Philip Yorke, second Earl of Hardwicke (1720-90), wrote a 'Weekly Letter' from 1741 to 1766, an unpublished correspondence of 680 letters now housed in the British Library (Additional Mss 35396-400). The article examines the dimensions and purposes of this correspondence, an important conduit of information for the influential coterie of the 'Hardwicke circle' gathered around Yorke in the Royal Society. It explores the writers' self-conception of the correspondence, which was expressed in deliberately archaic categories of seventeenth-century news exchange, such as the newsletter, aviso and a-la-main. It shows how the letter writers negotiated their difference in status through the discourse of friendship, and concludes that the 'Weekly Letter' constituted for the correspondents a form of private knowledge, restricted in circulation to their discrete group, and as such unlike the open and networked model of Enlightenment science.

  19. Temporal Features of the Differentiation between Self-Name and Religious Leader Name among Christians: An ERP Study

    Directory of Open Access Journals (Sweden)

    Ruixue Xia

    2018-01-01

    Full Text Available Existing neuroimaging studies have shown that religion, as a subjective culture, can influence self-referential processing. However, the time course of this impact remains unclear. The present study examined how Christians process their own names, the name of their religious leader (i.e., Jesus, and a famous person’s name (i.e., Yao Ming. Behavioral and EEG data were recorded while the participants performed a name-color judgment task for these three names. The behavioral data showed no significant differences in reaction time or accuracy among the names. However, the ERP data showed that the P200 and P300 amplitudes elicited by the self-name and religious leader name were larger than those elicited by the famous name. Furthermore, the self-name also elicited a larger P300 amplitude than the religious leader name did. These results suggested that both the self-name and the religious leader name were processed preferentially due to their important social value for the self as compared to a generally famous name. Importantly, the dissociation between the self-name and the religious leader name was observed at a high-order cognitive stage, which might be attributed to their different roles in one’s self-concept.

  20. Simple street tree sampling

    Science.gov (United States)

    David J. Nowak; Jeffrey T. Walton; James Baldwin; Jerry. Bond

    2015-01-01

    Information on street trees is critical for management of this important resource. Sampling of street tree populations provides an efficient means to obtain street tree population information. Long-term repeat measures of street tree samples supply additional information on street tree changes and can be used to report damages from catastrophic events. Analyses of...

  1. TreeFam: a curated database of phylogenetic trees of animal gene families

    DEFF Research Database (Denmark)

    Li, Heng; Coghlan, Avril; Ruan, Jue

    2006-01-01

    TreeFam is a database of phylogenetic trees of gene families found in animals. It aims to develop a curated resource that presents the accurate evolutionary history of all animal gene families, as well as reliable ortholog and paralog assignments. Curated families are being added progressively......, based on seed alignments and trees in a similar fashion to Pfam. Release 1.1 of TreeFam contains curated trees for 690 families and automatically generated trees for another 11 646 families. These represent over 128 000 genes from nine fully sequenced animal genomes and over 45 000 other animal proteins...

  2. Naming names: the first women taxonomists in mycology

    Directory of Open Access Journals (Sweden)

    Sara Maroske

    2018-03-01

    Full Text Available The transition from amateur to professional in natural history is generally regarded as having taken place in the nineteenth century, but landmark events such as the 1917 appointment of mycologist Johanna Westerdijk (1883–1961 as the first female professor in the Netherlands indicate that the pattern of change for women was more varied and delayed than for men. We investigate this transition in mycology, and identify only 43 women in the Western World who published scientific mycological literature pre-1900, of whom twelve published new fungal taxa. By charting the emergence of these women over time, and comparing the output of self-taught amateurs and university graduates, we establish the key role of access to higher education in female participation in mycology. Using a suite of strategies, six of the self-taught amateurs managed to overcome their educational disadvantages and name names — Catharina Dörrien (the first to name a fungal taxon, Marie-Anne Libert, Mary Elizabeth Banning, Élise-Caroline Bommer, Mariette Rousseau, and Annie Lorrain Smith. By 1900, the professional era for women in mycology was underway, and increasing numbers published new taxa. Parity with male colleagues in recognition and promotion, however, remains an ongoing issue. Key words: Amateurs, Fungi, Gender studies, History of science, Plant pathology

  3. The Mind of the Copaíba Tree: Notes on Extractivism, Animism, and Ontology from Southern Bahia

    Directory of Open Access Journals (Sweden)

    Jonathan DeVore

    2017-12-01

    Full Text Available This article analyzes ritualized prescriptions for harvesting oleoresin or “oil” from the copaíba tree in Brazil. These harvesting prescriptions involve increasingly complex attributions of mind to the copaíba tree itself. The copaíba tree is widespread throughout the Americas, and for centuries has been well-known for the medicinal oil that can be extracted from its trunk. In Brazil, contemporary knowledge of the copaíba tree is bound up with colonial history and what were often destructive extractivist economies. Whereas historical accounts of the copaíba tree are often limited to mechanistic descriptions for extracting oil, this article examines attributions of mind that harvesters make to the copaíba tree. These attributions can be read from procedures for extracting oil. Such procedures are concerned with moon cycles, tree marking, sexual activity, and gaze. The article shows that such prescriptions have a wide transregional and interethnic distribution, from the Amazon Basin in northern Brazil to the Atlantic Forest on Bahia’s southern coast. New evidence from southern Bahia also involves prescriptions concerning speech and naming, which presuppose that the copaíba tree is sensitive to intentionality and human language. These mind attributions are inferred through pragmatic analysis of the (ontological presuppositions that are embedded by harvesting prescriptions. The contribution concludes with reflections on the implications of this presuppositional analytic approach for debates concerned with animism and the “ontological turn.”

  4. Video data of flowers, fruitlets, and fruit in apple trees during the 2017 growing season at USDA-ARS-AFRS

    Science.gov (United States)

    This record contains videos of apple trees acquired from a ground vehicle throughout the growing season at the USDA-ARS, Appalachian Fruit Research Station. Research in precision management methods in orchard crops revolve around locating objects of interest, namely flowers, fruitlets, and fruit, a...

  5. Tree-space statistics and approximations for large-scale analysis of anatomical trees

    DEFF Research Database (Denmark)

    Feragen, Aasa; Owen, Megan; Petersen, Jens

    2013-01-01

    parametrize the relevant parts of tree-space well. Using the developed approximate statistics, we illustrate how the structure and geometry of airway trees vary across a population and show that airway trees with Chronic Obstructive Pulmonary Disease come from a different distribution in tree-space than...

  6. Selecting Tree Species with High Carbon Stock Potency from Tropical Upland Forest of Bedugul-Bali, Indonesia

    Directory of Open Access Journals (Sweden)

    Arief Priyadi

    2014-11-01

    Full Text Available Vegetation studies to reveal tree diversity and its contribution to carbon stock were conducted in three different sites of upland forest in Bali, Indonesia. The sites were located approximately 60 km north of the Bali Province capital city of Denpasar in an area named Bedugul. Those three sites were Mt. Mangu (forest area east of Beratan lake, forest area west of Buyan lake and forest area south of Tamblingan lake. There were 44, 29, and 21 tree species of 14, 19, 14 families with Shannon Diversity Index (H’ of 2.87, 2.64 and 1.69 respectively. Carbon stock average of above ground tree biomass from these sites were 214.2, 693.0 and 749.1 ton.ha-1 respectively. Tree species with top Summed Dominance Ratio (SDR in each of those sites were Platea latifolia in Mt. Mangu, Planchonella sp. in Buyan, and Tabernaemontana macrocarpa in Tamblingan. Average carbon content of these three species were 493.25, 12,876.26 and 40.35 kg.ha-1 respectively.

  7. GEOGRAPHIC NAMES INFORMATION SYSTEM (GNIS) ...

    Science.gov (United States)

    The Geographic Names Information System (GNIS), developed by the U.S. Geological Survey in cooperation with the U.S. Board on Geographic Names (BGN), contains information about physical and cultural geographic features in the United States and associated areas, both current and historical, but not including roads and highways. The database also contains geographic names in Antarctica. The database holds the Federally recognized name of each feature and defines the location of the feature by state, county, USGS topographic map, and geographic coordinates. Other feature attributes include names or spellings other than the official name, feature designations, feature class, historical and descriptive information, and for some categories of features the geometric boundaries. The database assigns a unique feature identifier, a random number, that is a key for accessing, integrating, or reconciling GNIS data with other data sets. The GNIS is our Nation's official repository of domestic geographic feature names information.

  8. Relating phylogenetic trees to transmission trees of infectious disease outbreaks.

    Science.gov (United States)

    Ypma, Rolf J F; van Ballegooijen, W Marijn; Wallinga, Jacco

    2013-11-01

    Transmission events are the fundamental building blocks of the dynamics of any infectious disease. Much about the epidemiology of a disease can be learned when these individual transmission events are known or can be estimated. Such estimations are difficult and generally feasible only when detailed epidemiological data are available. The genealogy estimated from genetic sequences of sampled pathogens is another rich source of information on transmission history. Optimal inference of transmission events calls for the combination of genetic data and epidemiological data into one joint analysis. A key difficulty is that the transmission tree, which describes the transmission events between infected hosts, differs from the phylogenetic tree, which describes the ancestral relationships between pathogens sampled from these hosts. The trees differ both in timing of the internal nodes and in topology. These differences become more pronounced when a higher fraction of infected hosts is sampled. We show how the phylogenetic tree of sampled pathogens is related to the transmission tree of an outbreak of an infectious disease, by the within-host dynamics of pathogens. We provide a statistical framework to infer key epidemiological and mutational parameters by simultaneously estimating the phylogenetic tree and the transmission tree. We test the approach using simulations and illustrate its use on an outbreak of foot-and-mouth disease. The approach unifies existing methods in the emerging field of phylodynamics with transmission tree reconstruction methods that are used in infectious disease epidemiology.

  9. Decision-Tree Program

    Science.gov (United States)

    Buntine, Wray

    1994-01-01

    IND computer program introduces Bayesian and Markov/maximum-likelihood (MML) methods and more-sophisticated methods of searching in growing trees. Produces more-accurate class-probability estimates important in applications like diagnosis. Provides range of features and styles with convenience for casual user, fine-tuning for advanced user or for those interested in research. Consists of four basic kinds of routines: data-manipulation, tree-generation, tree-testing, and tree-display. Written in C language.

  10. Tree-growth analyses to estimate tree species' drought tolerance.

    Science.gov (United States)

    Eilmann, Britta; Rigling, Andreas

    2012-02-01

    Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree species' potential for surviving future aggravated environmental conditions is rather demanding. The aim of this study was to find a tree-ring-based method suitable for identifying very drought-tolerant species, particularly potential substitute species for Scots pine (Pinus sylvestris L.) in Valais. In this inner-Alpine valley, Scots pine used to be the dominating species for dry forests, but today it suffers from high drought-induced mortality. We investigate the growth response of two native tree species, Scots pine and European larch (Larix decidua Mill.), and two non-native species, black pine (Pinus nigra Arnold) and Douglas fir (Pseudotsuga menziesii Mirb. var. menziesii), to drought. This involved analysing how the radial increment of these species responded to increasing water shortage (abandonment of irrigation) and to increasingly frequent drought years. Black pine and Douglas fir are able to cope with drought better than Scots pine and larch, as they show relatively high radial growth even after irrigation has been stopped and a plastic growth response to drought years. European larch does not seem to be able to cope with these dry conditions as it lacks the ability to recover from drought years. The analysis of trees' short-term response to extreme climate events seems to be the most promising and suitable method for detecting how tolerant a tree species is towards drought. However, combining all the methods used in this study provides a complete picture of how water shortage could limit species.

  11. Identification of New Diterpenes as Putative Marker Compounds Distinguishing Agnus Castus Fruit (Chaste Tree) from Shrub Chaste Tree Fruit (Viticis Fructus).

    Science.gov (United States)

    Oshima, Naohiro; Masada, Sayaka; Suzuki, Ryuta; Yagi, Kanae; Matsufuji, Hiroshi; Suenaga, Emi; Takahashi, Yutaka; Yahagi, Tadahiro; Watanabe, Masato; Yahara, Shoji; Iida, Osamu; Kawahara, Nobuo; Maruyama, Takuro; Goda, Yukihiro; Hakamatsuka, Takashi

    2016-01-01

    Agnus Castus Fruit is defined in the European Pharmacopoeia as the dried ripe fruit of Vitex agnus-castus. In Europe it is used as a medicine targeting premenstrual syndrome and climacteric disorder. In Japan, Agnus Castus Fruit is becoming popular as a raw material for over-the-counter drugs and health food products, though its congenic species, Vitex rotundifolia and Vitex trifolia, have been used as Shrub Chaste Tree Fruit in traditional medicines. Therefore, it is important to discriminate these Vitex plants from the viewpoint of regulatory science. Here we tried to identify putative marker compounds that distinguish between Agnus Castus Fruit and Shrub Chaste Tree Fruit. We analyzed extracts of each crude drug by liquid chromatography-mass spectrometry, and performed differential analysis by comparison of each chromatogram to find one or more peaks characteristic of Agnus Castus Fruit. A peak was isolated and identified as an equilibrium mixture of new compounds named chastol (1) and epichastol (1a). The planar structures of 1 and 1a were determined spectroscopically. Their relative configurations were revealed by nuclear Overhauser effect spectroscopy and differential nuclear Overhauser effect-NMR data. Since avoiding contamination from closely related species is needed for the quality control of natural pharmaceuticals, this information will be valuable to establish a method for the quality control of both, Agnus Castus Fruit and Shrub Chaste Tree Fruit products. Georg Thieme Verlag KG Stuttgart · New York.

  12. On streamlining the Ukrainian names of plants. Information 7. Spelling the names of plant varieties.

    Directory of Open Access Journals (Sweden)

    В. М. Меженський

    2016-07-01

    Full Text Available Purpose. To analyse the practice of transliteration of the Ukrainian cultivar names and rendering foreign names by means of the Ukrainian language, as well as special aspects of cultivar names spelling in special literature. Results. Cultivar names as a special category require preservation of primary graphics or sound type in the other language. This can be achieved by direct inclusion of the original name to the Ukrainian text or by practical transcribing, but not by transliteration or translation. Otherwise, Ukrainian names should be transliterated for inclusion to the texts in Latin characters. Transcription/transliteration in both directions is performed from the source language, though, as practice shows, in some Ukrainian publications the Russian is wrongly used as an intermediary language. Some national scientific publications ignore the recommendations of the International Code of Nomenclature for Cultivated Plants that is not conducive to the success of scientific communication in the globalized world. Conclusions. The foreign names of plant varieties should be entered into the Ukrainian text keeping the original spelling or by means of practical transcription. The loan of foreign names is performed by transcribing directly from the source language; if the language doesn’t have the Latin alphabet, Latinized name transcription is acceptable. Recommendations of the International Code of Nomenclature for Cultivated Plants that concern graphic highlighting of the cultivar names in the text enclosing them in single quotation marks and writing each word of a cultivar name with a capital letter should necessarily be applied in the foreign-language publications and extended to the Ukrainian special literature, at least, in terms of the use of single quotation marks. Ukrainian names should be transliterated only in accordance with the regulations.

  13. Are trees long-lived?

    Science.gov (United States)

    Kevin T. Smith

    2009-01-01

    Trees and tree care can capture the best of people's motivations and intentions. Trees are living memorials that help communities heal at sites of national tragedy, such as Oklahoma City and the World Trade Center. We mark the places of important historical events by the trees that grew nearby even if the original tree, such as the Charter Oak in Connecticut or...

  14. The Name Game.

    Science.gov (United States)

    Crawley, Sharon J.

    Described is a game which provides a method for teaching students to locate cities and towns on a map. Students are provided with a list of descriptive phrases which stand for the name of a city, e.g., hot weather town (Summerville, Georgia); a chocolate candy bar (Hershey, Pennsylvania). Using a map, students must then try to find the name of a…

  15. There's Life in Hazard Trees

    Science.gov (United States)

    Mary Torsello; Toni McLellan

    The goals of hazard tree management programs are to maximize public safety and maintain a healthy sustainable tree resource. Although hazard tree management frequently targets removal of trees or parts of trees that attract wildlife, it can take into account a diversity of tree values. With just a little extra planning, hazard tree management can be highly beneficial...

  16. StrainSeeker: fast identification of bacterial strains from raw sequencing reads using user-provided guide trees.

    Science.gov (United States)

    Roosaare, Märt; Vaher, Mihkel; Kaplinski, Lauris; Möls, Märt; Andreson, Reidar; Lepamets, Maarja; Kõressaar, Triinu; Naaber, Paul; Kõljalg, Siiri; Remm, Maido

    2017-01-01

    Fast, accurate and high-throughput identification of bacterial isolates is in great demand. The present work was conducted to investigate the possibility of identifying isolates from unassembled next-generation sequencing reads using custom-made guide trees. A tool named StrainSeeker was developed that constructs a list of specific k -mers for each node of any given Newick-format tree and enables the identification of bacterial isolates in 1-2 min. It uses a novel algorithm, which analyses the observed and expected fractions of node-specific k -mers to test the presence of each node in the sample. This allows StrainSeeker to determine where the isolate branches off the guide tree and assign it to a clade whereas other tools assign each read to a reference genome. Using a dataset of 100 Escherichia coli isolates, we demonstrate that StrainSeeker can predict the clades of E. coli with 92% accuracy and correct tree branch assignment with 98% accuracy. Twenty-five thousand Illumina HiSeq reads are sufficient for identification of the strain. StrainSeeker is a software program that identifies bacterial isolates by assigning them to nodes or leaves of a custom-made guide tree. StrainSeeker's web interface and pre-computed guide trees are available at http://bioinfo.ut.ee/strainseeker. Source code is stored at GitHub: https://github.com/bioinfo-ut/StrainSeeker.

  17. Feeling-of-knowing for proper names.

    Science.gov (United States)

    Izaute, Marie; Chambres, Patrick; Larochelle, Serge

    2002-12-01

    The main objective of the presented study was to study feeling-of-knowing (FOK) in proper name retrieval. Many studies show that FOK can predict performance on a subsequent criterion test. Although feeling-of-knowing studies involve questions about proper names, none make this distinction between proper names and common names. Nevertheless, the specific character of proper names as a unique label referring to a person should allow participants to target precisely the desired verbal label. Our idea here was that the unique character of proper name information should result in more accurate FOK evaluations. In the experiment, participants evaluated feeling-of-knowing for proper and common name descriptions. The study demonstrates that FOK judgments are more accurate for proper names than for common names. The implications of the findings for proper names are briefly discussed in terms of feeling-of-knowing hypotheses.

  18. Regenerative Resilience of Tree Species in a Degraded Forest within Mt Kenya Ecosystem

    International Nuclear Information System (INIS)

    Omenda, T.O; Kariuki, J.G; Kamondo, B.M; Kiamba, J.K

    2007-01-01

    There is widespread human induced degradation of natural forest in Kenya. The major challenge to this situation is to devise cost effective rehabilitation approaches to reverse this trend. A study was conducted in Nyanza province of Kenya describing the structure and diversity of a disturbed natural forest and understanding the role so various propagules, namely seed, soil seed bank and coppices in post-disturbance recovery. The pre-disturbance forest type was a podo-Cassipourea-Teclea tropical montane forest. Four 350 m long line-plot transects were randomly located within the forest. Tree and stump data were obtained from 20*20 m plots located at 50 m intervals, while sapling, seeding and soil seed bank data were obtained from 5*5 m, 1*1 m and 0.2*0.2*0.5 subplots respectively, nested within the large plot. An 'Index of Species Resilence' that defines their continued was developed based on the tree species ability to coppice and their representation in seedling, sapling and tree stages. The forest condition was highly heterogeneous as determined through spatial distribution of basal area, height and diameter of breast height (dbh) of trees and cut stumps, the latter an indicator of disturbance. The Resilience Index indicated that, out of the 40 tree species found in the forest, only 30% had stable presence while 50% had an unstable presence characterized by in key succession stages-implying low auto-recovery potential. Results indicated that, coppicing had a more critical role in regeneration than previously thought, with 78% of all cut-tree species coppicing while only 27.5% of all the trees species regenerated from seed. The role of soil seed bank in auto-recovery was insignificant in this site. The apparent high coppicing potential presents a new opportunity for managing natural forests

  19. Proximate content and lipid profile of seeds from Rapanea melanophloeos (The Cape Beech) tree

    International Nuclear Information System (INIS)

    Lotier, N.; Chivandi, E.; Lembede, B.W.; Ibrahim, K.G.; Nyakudya, T.T.

    2017-01-01

    Rapanea melanophloeos(Cape beech)is a fruit-bearing tree indigenous to Southern Africa which produces edible fruit. Seed samples obtained from ripe fruit of the Cape beech trees had their proximate analysis and lipid profiling done. The dry matter and ash contributed 91.29 +- 0.00 %, 1.50 +- 0.01 % of the mass of the seed. Whilst the other proximate analytes namely crude fibre, crude protein and ether extract made up 5.71 +- 0.43 %, 10.50 +- 0.49 % and 4.75 +- 0.09 percentage of the mass of the seeds respectively. The fatty acid profile of the seed oil revealed Linoleic acid (50.43 +- 0.38 %) to be the most dominant. R. melanophloeos seeds are not a viable source of nutrients. (author)

  20. Fast Tree: Computing Large Minimum-Evolution Trees with Profiles instead of a Distance Matrix

    Energy Technology Data Exchange (ETDEWEB)

    N. Price, Morgan; S. Dehal, Paramvir; P. Arkin, Adam

    2009-07-31

    Gene families are growing rapidly, but standard methods for inferring phylogenies do not scale to alignments with over 10,000 sequences. We present FastTree, a method for constructing large phylogenies and for estimating their reliability. Instead of storing a distance matrix, FastTree stores sequence profiles of internal nodes in the tree. FastTree uses these profiles to implement neighbor-joining and uses heuristics to quickly identify candidate joins. FastTree then uses nearest-neighbor interchanges to reduce the length of the tree. For an alignment with N sequences, L sites, and a different characters, a distance matrix requires O(N^2) space and O(N^2 L) time, but FastTree requires just O( NLa + N sqrt(N) ) memory and O( N sqrt(N) log(N) L a ) time. To estimate the tree's reliability, FastTree uses local bootstrapping, which gives another 100-fold speedup over a distance matrix. For example, FastTree computed a tree and support values for 158,022 distinct 16S ribosomal RNAs in 17 hours and 2.4 gigabytes of memory. Just computing pairwise Jukes-Cantor distances and storing them, without inferring a tree or bootstrapping, would require 17 hours and 50 gigabytes of memory. In simulations, FastTree was slightly more accurate than neighbor joining, BIONJ, or FastME; on genuine alignments, FastTree's topologies had higher likelihoods. FastTree is available at http://microbesonline.org/fasttree.

  1. TreeRipper web application: towards a fully automated optical tree recognition software

    Directory of Open Access Journals (Sweden)

    Hughes Joseph

    2011-05-01

    Full Text Available Abstract Background Relationships between species, genes and genomes have been printed as trees for over a century. Whilst this may have been the best format for exchanging and sharing phylogenetic hypotheses during the 20th century, the worldwide web now provides faster and automated ways of transferring and sharing phylogenetic knowledge. However, novel software is needed to defrost these published phylogenies for the 21st century. Results TreeRipper is a simple website for the fully-automated recognition of multifurcating phylogenetic trees (http://linnaeus.zoology.gla.ac.uk/~jhughes/treeripper/. The program accepts a range of input image formats (PNG, JPG/JPEG or GIF. The underlying command line c++ program follows a number of cleaning steps to detect lines, remove node labels, patch-up broken lines and corners and detect line edges. The edge contour is then determined to detect the branch length, tip label positions and the topology of the tree. Optical Character Recognition (OCR is used to convert the tip labels into text with the freely available tesseract-ocr software. 32% of images meeting the prerequisites for TreeRipper were successfully recognised, the largest tree had 115 leaves. Conclusions Despite the diversity of ways phylogenies have been illustrated making the design of a fully automated tree recognition software difficult, TreeRipper is a step towards automating the digitization of past phylogenies. We also provide a dataset of 100 tree images and associated tree files for training and/or benchmarking future software. TreeRipper is an open source project licensed under the GNU General Public Licence v3.

  2. On Determining if Tree-based Networks Contain Fixed Trees.

    Science.gov (United States)

    Anaya, Maria; Anipchenko-Ulaj, Olga; Ashfaq, Aisha; Chiu, Joyce; Kaiser, Mahedi; Ohsawa, Max Shoji; Owen, Megan; Pavlechko, Ella; St John, Katherine; Suleria, Shivam; Thompson, Keith; Yap, Corrine

    2016-05-01

    We address an open question of Francis and Steel about phylogenetic networks and trees. They give a polynomial time algorithm to decide if a phylogenetic network, N, is tree-based and pose the problem: given a fixed tree T and network N, is N based on T? We show that it is [Formula: see text]-hard to decide, by reduction from 3-Dimensional Matching (3DM) and further that the problem is fixed-parameter tractable.

  3. Model-Independent Evaluation of Tumor Markers and a Logistic-Tree Approach to Diagnostic Decision Support

    Directory of Open Access Journals (Sweden)

    Weizeng Ni

    2014-01-01

    Full Text Available Sensitivity and specificity of using individual tumor markers hardly meet the clinical requirement. This challenge gave rise to many efforts, e.g., combing multiple tumor markers and employing machine learning algorithms. However, results from different studies are often inconsistent, which are partially attributed to the use of different evaluation criteria. Also, the wide use of model-dependent validation leads to high possibility of data overfitting when complex models are used for diagnosis. We propose two model-independent criteria, namely, area under the curve (AUC and Relief to evaluate the diagnostic values of individual and multiple tumor markers, respectively. For diagnostic decision support, we propose the use of logistic-tree which combines decision tree and logistic regression. Application on a colorectal cancer dataset shows that the proposed evaluation criteria produce results that are consistent with current knowledge. Furthermore, the simple and highly interpretable logistic-tree has diagnostic performance that is competitive with other complex models.

  4. Whole-tree distribution and temporal variation of non-structural carbohydrates in broadleaf evergreen trees.

    Science.gov (United States)

    Smith, Merryn G; Miller, Rebecca E; Arndt, Stefan K; Kasel, Sabine; Bennett, Lauren T

    2018-04-01

    Non-structural carbohydrates (NSCs) form a fundamental yet poorly quantified carbon pool in trees. Studies of NSC seasonality in forest trees have seldom measured whole-tree NSC stocks and allocation among organs, and are not representative of all tree functional types. Non-structural carbohydrate research has primarily focussed on broadleaf deciduous and coniferous evergreen trees with distinct growing seasons, while broadleaf evergreen trees remain under-studied despite their different growth phenology. We measured whole-tree NSC allocation and temporal variation in Eucalyptus obliqua L'Hér., a broadleaf evergreen tree species typically occurring in mixed-age temperate forests, which has year-round growth and the capacity to resprout after fire. Our overarching objective was to improve the empirical basis for understanding the functional importance of NSC allocation and stock changes at the tree- and organ-level in this tree functional type. Starch was the principal storage carbohydrate and was primarily stored in the stem and roots of young (14-year-old) trees rather than the lignotuber, which did not appear to be a specialized starch storage organ. Whole-tree NSC stocks were depleted during spring and summer due to significant decreases in starch mass in the roots and stem, seemingly to support root and crown growth but potentially exacerbated by water stress in summer. Seasonality of stem NSCs differed between young and mature trees, and was not synchronized with stem basal area increments in mature trees. Our results suggest that the relative magnitude of seasonal NSC stock changes could vary with tree growth stage, and that the main drivers of NSC fluctuations in broadleaf evergreen trees in temperate biomes could be periodic disturbances such as summer drought and fire, rather than growth phenology. These results have implications for understanding post-fire tree recovery via resprouting, and for incorporating NSC pools into carbon models of mixed

  5. The effect of contaminated groundwater on tree growth: A tree-ring analysis

    International Nuclear Information System (INIS)

    LeBlanc, D.C.; Loehle, C.

    1990-10-01

    A study was conducted on the effect of contaminated groundwater seepage on tree growth downslope from F- and H-Area seepage basins of the Savannah River Site. Trees in wetlands along Four Mile Creek began to show localized stress and mortality in the late 1970s. Extreme winter temperatures and high rainfall were ruled out as potential causal factors of tree stress. Drought was shown to affect trees in both contaminated and uncontaminated zones, but trees in uncontaminated areas exhibit better recovery after drought than trees in contaminated areas. Pollution-mediated alteration of soil acidity and aluminum, sodium, and heavy metal concentrations likely acted to predispose trees to decline, with severe drought acting as the trigger for decline initiation and tree death. Thus, a moderate pollution loading, not sufficient to cause visible damage of itself, may create conditions in which sudden, severe decline could result from natural stresses. This mechanism of forest decline is common, and should be considered in evaluations of the impact of pollution on wetland forest systems. 28 refs., 4 figs., 6 tabs

  6. SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.

    Science.gov (United States)

    Beccati, Alan; Gerken, Jan; Quast, Christian; Yilmaz, Pelin; Glöckner, Frank Oliver

    2017-09-30

    Phylogenetic trees are an important tool to study the evolutionary relationships among organisms. The huge amount of available taxa poses difficulties in their interactive visualization. This hampers the interaction with the users to provide feedback for the further improvement of the taxonomic framework. The SILVA Tree Viewer is a web application designed for visualizing large phylogenetic trees without requiring the download of any software tool or data files. The SILVA Tree Viewer is based on Web Geographic Information Systems (Web-GIS) technology with a PostgreSQL backend. It enables zoom and pan functionalities similar to Google Maps. The SILVA Tree Viewer enables access to two phylogenetic (guide) trees provided by the SILVA database: the SSU Ref NR99 inferred from high-quality, full-length small subunit sequences, clustered at 99% sequence identity and the LSU Ref inferred from high-quality, full-length large subunit sequences. The Tree Viewer provides tree navigation, search and browse tools as well as an interactive feedback system to collect any kinds of requests ranging from taxonomy to data curation and improving the tool itself.

  7. A Doctor's Name as a Brand: A Nationwide Survey on Registered Clinic Names in Taiwan.

    Science.gov (United States)

    Chu, Feng-Yuan; Dai, Ying-Xiu; Liu, Jui-Yao; Chen, Tzeng-Ji; Chou, Li-Fang; Hwang, Shinn-Jang

    2018-06-01

    In countries where the private clinics of physicians can be freely named, registering a clinic with a physician's name is one way to make patients familiar with the physician. No previous study had investigated how clinics make use of this method of personal branding. Therefore, the current study analyzed 10,847 private physician Western medicine clinics in Taiwan. Of those clinics, 31.0% ( n = 3363) were named with a physician's full name, 8.9% ( n = 960) with a surname, and 8.1% ( n = 884) with a given name. The proportion of clinics registered with a physician's name was lower in rural areas (37.3%) than in urban (48.5%) and suburban areas (49.2%), respectively. Among clinics with only one kind of specialist, a physician's name was used most frequently in clinics of obstetrics and gynecology (64.9%), otorhinolaryngology (64.1%), and dermatology (63.4%). In Taiwan, fewer than half of clinics used a physician's name as a brand. The sociocultural or strategic factors and real benefits of doing so could be further studied in the future for a better understanding of healthcare services management.

  8. D2-tree

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Sioutas, Spyros; Pantazos, Kostas

    2015-01-01

    We present a new overlay, called the Deterministic Decentralized tree (D2-tree). The D2-tree compares favorably to other overlays for the following reasons: (a) it provides matching and better complexities, which are deterministic for the supported operations; (b) the management of nodes (peers...

  9. Tree felling 2014

    CERN Multimedia

    2014-01-01

    With a view to creating new landscapes and making its population of trees safer and healthier, this winter CERN will complete the tree-felling campaign started in 2010.   Tree felling will take place between 15 and 22 November on the Swiss part of the Meyrin site. This work is being carried out above all for safety reasons. The trees to be cut down are at risk of falling as they are too old and too tall to withstand the wind. In addition, the roots of poplar trees are very powerful and spread widely, potentially damaging underground networks, pavements and roadways. Compensatory tree planting campaigns will take place in the future, subject to the availability of funding, with the aim of creating coherent landscapes while also respecting the functional constraints of the site. These matters are being considered in close collaboration with the Geneva nature and countryside directorate (Direction générale de la nature et du paysage, DGNP). GS-SE Group

  10. Phylogenetic trees

    OpenAIRE

    Baños, Hector; Bushek, Nathaniel; Davidson, Ruth; Gross, Elizabeth; Harris, Pamela E.; Krone, Robert; Long, Colby; Stewart, Allen; Walker, Robert

    2016-01-01

    We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information on phylogenetic algebraic geometry and show how the package PhylogeneticTrees can be used to calculate a generating set for a phylogenetic ideal as well as a lower bound for its dimension. Finally, we show how methods within the package can be used to compute a generating set for the join of any two ideals.

  11. The List of Available Names (LAN): A new generation for stable taxonomic names in zoology?

    Science.gov (United States)

    Alonso-Zarazaga, Miguel A; Fautin, Daphne Gail; Michel, Ellinor

    2016-01-01

    The List of Available Names in Zoology (LAN) is an inventory of names with specific scope in time and content, presented and approved in parts, and constituted as a cumulative index of names available for use in zoological nomenclature. It was defined in Article 79 in the fourth edition of the International Code of Zoological Nomenclature. The LAN is likely to gain importance with the development of the online Official Registry for Zoological Nomenclature (ZooBank) as it is potentially a source of many nomenclaturally certified names. Article 79 describes the deliberative process for adding large numbers of names to the LAN simultaneously, detailing steps and chronology for submission of a candidate Part to the LAN and consideration of a candidate Part by the public and Commission, but it is largely mute about the contents of a candidate Part. It does make clear that a name within the scope of a Part but not on the LAN has no nomenclatural standing, even if it had previously been considered available, thereby preventing long-forgotten names from displacing accepted ones and the accumulation of nomina dubia. Thus, for taxa on the LAN, nomenclatural archaeology - the resurrecting of old unused names to replace by priority names in current usage - will not be worthwhile. Beyond that, it has been unclear if Article 79 is intended to document every available name known within the scope of the Part, or if its intention is to pare the inventory of available names within the scope of the Part. Consideration by the Commission and two committees to deal with the LAN have defined steps to implement Article 79 with the latter intent. Procedures for consideration of a candidate Part are defined in a manual, published as an appendix in this volume.

  12. Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

    Science.gov (United States)

    Allman, Elizabeth S; Degnan, James H; Rhodes, John A

    2011-06-01

    Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

  13. Color Naming Experiment in Mongolian Language

    Directory of Open Access Journals (Sweden)

    Nandin-Erdene Osorjamaa

    2015-11-01

    Full Text Available There are numerous researches on color terms and names in many languages. In Mongolian language there are few doctoral theses on color naming. Cross cultural studies of color naming have demonstrated Semantic relevance in French and Mongolian color name Gerlee Sh. (2000; Comparisons of color naming across English and Mongolian Uranchimeg B. (2004; Semantic comparison between Russian and Mongolian idioms Enhdelger O. (1996; across symbolism Dulam S. (2007 and few others. Also a few articles on color naming by some Mongolian scholars are Tsevel, Ya. (1947, Baldan, L. (1979, Bazarragchaa, M. (1997 and others. Color naming studies are not sufficiently studied in Modern Mongolian. Our research is considered to be the first intended research on color naming in Modern Mongolian, because it is one part of Ph.D dissertation on color naming. There are two color naming categories in Mongolian, basic color terms and non- basic color terms. There are seven basic color terms in Mongolian. This paper aims to consider how Mongolian color names are derived from basic colors by using psycholinguistics associative experiment. It maintains the students and researchers to acquire the specific understanding of the differences and similarities of color naming in Mongolian and  English languages from the psycho-linguistic aspect.

  14. Improved vocabulary production after naming therapy in aphasia: can gains in picture naming generalize to connected speech?

    Science.gov (United States)

    Conroy, Paul; Sage, Karen; Ralph, Matt Lambon

    2009-01-01

    Naming accuracy for nouns and verbs in aphasia can vary across different elicitation contexts, for example, simple picture naming, composite picture description, narratives, and conversation. For some people with aphasia, naming may be more accurate to simple pictures as opposed to naming in spontaneous, connected speech; for others, the opposite pattern may be evident. These differences have, in some instances, been related to word class (for example, noun or verb) as well as aphasia subtype. Given that the aim of picture-naming therapies is to improve word-finding in general, these differences in naming accuracy across contexts may have important implications for the potential functional benefits of picture-naming therapies. This study aimed to explore single-word therapy for both nouns and verbs, and to answer the following questions. (1) To what extent does an increase in naming accuracy after picture-naming therapy (for both nouns and verbs) predict accurate naming of the same items in less constrained spontaneous connected speech tasks such as composite picture description and retelling of a narrative? (2) Does the word class targeted in therapy (verb or noun) dictate whether there is 'carry-over' of the therapy item to connected speech tasks? (3) Does the speed at which the picture is named after therapy predict whether it will also be used appropriately in connected speech tasks? Seven participants with aphasia of varying degrees of severity and subtype took part in ten therapy sessions over five weeks. A set of potentially useful items was collected from control participant accounts of the Cookie Theft Picture Description and the Cinderella Story from the Quantitative Production Analysis. Twenty-four of these words (twelve verbs and twelve nouns) were collated for each participant, on the basis that they had failed to name them in either simple picture naming or connected speech tasks (picture-supported narrative and unsupported retelling of a narrative

  15. 27 CFR 5.34 - Brand names.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Brand names. 5.34 Section... Spirits § 5.34 Brand names. (a) Misleading brand names. No label shall contain any brand name, which... officer finds that such brand name (when appropriately qualified if required) conveys no erroneous...

  16. Can Your Institution's Name Influence Constituent Response? An Initial Assessment of Consumer Response to College Names.

    Science.gov (United States)

    Treadwell, D. F.

    2003-01-01

    Presents names of college and universities unfamiliar to potential students. Finds that one cluster of respondents had a clear preference for geographic or aspirational names while a second cluster had a preference for proper names. Notes that there was an overall preference for proper names. (SG)

  17. What’s In Your Name? Associated Meanings of the Common Filipino Names Among Young Filipinos

    Directory of Open Access Journals (Sweden)

    Shaira G. Castillo

    2016-11-01

    Full Text Available Name is important in knowing someone’s identity. By a person’s name someone can know his or her character. It is also possible that they bear a particular name because of their background and other factors that can lead to something important. This study aimed to find out the associative meanings of the most common Filipino male and female names among the Polytechnic University of the Philippines-Sta. Mesa students. Different factors such as character traits, physical appearance, and skills/talents were considered in determining meanings of the names. The study used quantitative and qualitative research approach, specifically the descriptive method, to analyze the gathered data. A selfadministered survey was distributed to 400 randomly selected respondents. General findings revealed that the respondents associated the most common Filipino male names in the same way regarding character traits and skills/talents. However, they have different associations to the male names in terms of physical appearance. On the other hand, the respondents associated the most common Filipino female names into similar character traits and physical appearance but associated them with different skills/talents. Results also revealed that the most common factors that influence the respondents’ associated meanings were relationships, experiences, popularity, and perception. The results imply that while young Filipinos associate similar character traits, physical appearances and skills to common Filipino names, they have different reasons in giving meanings to them.

  18. Covering tree with stars

    DEFF Research Database (Denmark)

    Baumbach, Jan; Guo, Jiong; Ibragimov, Rashid

    2015-01-01

    We study the tree edit distance problem with edge deletions and edge insertions as edit operations. We reformulate a special case of this problem as Covering Tree with Stars (CTS): given a tree T and a set of stars, can we connect the stars in by adding edges between them such that the resulting...... tree is isomorphic to T? We prove that in the general setting, CST is NP-complete, which implies that the tree edit distance considered here is also NP-hard, even when both input trees having diameters bounded by 10. We also show that, when the number of distinct stars is bounded by a constant k, CTS...

  19. Trees in the city: valuing street trees in Portland, Oregon

    Science.gov (United States)

    G.H. Donovan; D.T. Butry

    2010-01-01

    We use a hedonic price model to simultaneously estimate the effects of street trees on the sales price and the time-on-market (TOM) of houses in Portland. Oregon. On average, street trees add $8,870 to sales price and reduce TOM by 1.7 days. In addition, we found that the benefits of street trees spill over to neighboring houses. Because the provision and maintenance...

  20. What's in a Name ?The Effect of an Artist's Name on Aesthetic Judgements

    OpenAIRE

    Cleeremans, Axel; Ginsburgh, Victor; Klein, Olivier; Noury, Abdul Ghafar

    2016-01-01

    Both economists and art historians suggest that the name of the artist is important and belongs with the work. We carried out an experiment to explore the influence that the presence and knowledge of an artist’s name exert on aesthetic judgments. Forty participants (20 students majoring in psychology and 20 in art history) were asked to rank twelve works painted by different artists, some of which bore the name of their actual creators, others not. The results demonstrated that the presence o...