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Sample records for biologically relevant mono

  1. Biology relevant to space radiation

    International Nuclear Information System (INIS)

    The biological effects of the radiations to which mankind on earth are exposed are becoming known with an increasing degree of detail. This knowledge is the basis of the estimates of risk that, in turn, fosters a comprehensive and evolving radiation protection system. The substantial body of information has been, and is being, applied to questions about the biological effects of radiation is space and the associated risk estimates. The purpose of this paper is not to recount all the biological effect of radiation but to concentrate on those that may occur as a result from exposure to the radiations encountered in space. In general, the biological effects of radiation in space are the same as those on earth. However, the evidence that the effects on certain tissues by the heaviest-charged particles can be interpreted on the basis of our knowledge about other high-LET radiation is equivocal. This specific question will be discussed in greater detail later. It is important to point out the that there are only limited data about the effects on humans of two components of the radiations in space, namely protons and heavy ions. Thus predictions of effects on space crews are based on experimental systems exposed on earth at rates and fluences that are higher than those in space and one the effects of gamma or x rays with estimates of the equivalent doses using quality factors

  2. Biology relevant to space radiation

    Energy Technology Data Exchange (ETDEWEB)

    Fry, R.J.M. [Oak Ridge National Lab., TN (United States)

    1997-04-30

    There are only very limited data on the health effects to humans from the two major components of the radiations in space, namely protons and heavy ions. As a result, predictions of the accompanying effects must be based either on (1) data generated through studies of experimental systems exposed on earth at rates and fluences higher than those in space, or (2) extrapolations from studies of gamma and x rays. Better information is needed about the doses, dose rates, and the energy and LET spectra of the radiations at the organ level that are anticipated to be encountered during extended space missions. In particular, there is a need for better estimates of the relationship between radiation quality and biological effects. In the case of deterministic effects, it is the threshold that is important. The possibility of the occurrence of a large solar particle event (SPE) requires that such effects be considered during extended space missions. Analyses suggest, however, that it is feasible to provide sufficient shielding so as to reduce such effects to acceptable levels, particularly if the dose rates can be limited. If these analyses prove correct, the primary biological risks will be the stochastic effects (latent cancer induction). The contribution of one large SPE to the risk of stochastic effects while undesirable will not be large in comparison to the potential total dose on a mission of long duration.

  3. Gregory Bateson's relevance to current molecular biology

    DEFF Research Database (Denmark)

    Bruni, Luis Emilio

    2008-01-01

    come as a surprise today to realize how the general ideas that he was postulating for the study of communication systems in biology fit so well with the astonishing findings of current molecular biology, for example in the field of cellular signal transduction networks. I guess this is the case due to......-dependent information, hierarchical contexts and analog/digital communication, which I think molecular biologists could find of great inspiration. In particular I highlight ten “Batesonean ideas” that may prove to be of great relevance to the field of cellular signal transduction....

  4. Inferring Biologically Relevant Models: Nested Canalyzing Functions

    CERN Document Server

    Hinkelmann, Franziska

    2010-01-01

    Inferring dynamic biochemical networks is one of the main challenges in systems biology. Given experimental data, the objective is to identify the rules of interaction among the different entities of the network. However, the number of possible models fitting the available data is huge and identifying a biologically relevant model is of great interest. Nested canalyzing functions, where variables in a given order dominate the function, have recently been proposed as a framework for modeling gene regulatory networks. Previously we described this class of functions as an algebraic toric variety. In this paper, we present an algorithm that identifies all nested canalyzing models that fit the given data. We demonstrate our methods using a well-known Boolean model of the cell cycle in budding yeast.

  5. Positron Interactions with Biologically Relevant Molecules

    Science.gov (United States)

    Palihawadana, P.; Machacek, J. R.; Anderson, E.; Makochekanwa, C.; Sullivan, J. P.; Garcia, G.; Brunger, M. J.; Buckman, S. J.

    2011-05-01

    A series of measurements of positron interactions with biologically relevant molecules have been undertaken. We present both total scattering and differential scattering cross sections for Uracil (C4H4N2O2) , Tetrahydrofuran or THF (C4H8O), 3-hydroxy-THF(C4H8O2) and Pyrimidine (C4H4N2) . These measurements are absolute and include the positronium formation cross section which is important to investigations of positron transport in biological systems. The energy of the magnetically confined positron beam can be tuned between 1 and 200 eV, and the energy resolution of the beam is between 60 and 100 meV. We will discuss the experimental techniques, the sources of systematic errors which limit the current results, and prospects for the future. This work is supported by the Australian Research Council and the Australian Government's ISL Program.

  6. Future development of biologically relevant dosimetry.

    Science.gov (United States)

    Palmans, H; Rabus, H; Belchior, A L; Bug, M U; Galer, S; Giesen, U; Gonon, G; Gruel, G; Hilgers, G; Moro, D; Nettelbeck, H; Pinto, M; Pola, A; Pszona, S; Schettino, G; Sharpe, P H G; Teles, P; Villagrasa, C; Wilkens, J J

    2015-01-01

    Proton and ion beams are radiotherapy modalities of increasing importance and interest. Because of the different biological dose response of these radiations as compared with high-energy photon beams, the current approach of treatment prescription is based on the product of the absorbed dose to water and a biological weighting factor, but this is found to be insufficient for providing a generic method to quantify the biological outcome of radiation. It is therefore suggested to define new dosimetric quantities that allow a transparent separation of the physical processes from the biological ones. Given the complexity of the initiation and occurrence of biological processes on various time and length scales, and given that neither microdosimetry nor nanodosimetry on their own can fully describe the biological effects as a function of the distribution of energy deposition or ionization, a multiscale approach is needed to lay the foundation for the aforementioned new physical quantities relating track structure to relative biological effectiveness in proton and ion beam therapy. This article reviews the state-of-the-art microdosimetry, nanodosimetry, track structure simulations, quantification of reactive species, reference radiobiological data, cross-section data and multiscale models of biological response in the context of realizing the new quantities. It also introduces the European metrology project, Biologically Weighted Quantities in Radiotherapy, which aims to investigate the feasibility of establishing a multiscale model as the basis of the new quantities. A tentative generic expression of how the weighting of physical quantities at different length scales could be carried out is presented. PMID:25257709

  7. [Practice relevant research in biological psychiatry].

    Science.gov (United States)

    Meyer-Lindenberg, A

    2015-11-01

    The practice of psychiatry would be unthinkable without modern psychopharmacology. Drug treatment, especially of severe psychiatric disorders, is often a precondition of community participation, societal reintegration and recovery. Seen in this context it is understandable that biological psychiatry has long been primarily defined by its close interconnection with psychopharmacology and has been perceived this way by practicing physicians. In recent years, however, the concept of what is "biological" has markedly expanded and so has the outreach of this approach into the practice of psychiatry. This article discusses examples showing that biological research methods provide new impulses for individualized medicine, psychotherapy and understanding environmental risks and therefore provide the basis for a preemptive and preventive approach that will be the key to master the challenges posed by the severe burden of mental illness. PMID:26440519

  8. Relevance of Dynamic Clustering to Biological Networks

    CERN Document Server

    Kaneko, K

    1993-01-01

    Abstract Network of nonlinear dynamical elements often show clustering of synchronization by chaotic instability. Relevance of the clustering to ecological, immune, neural, and cellular networks is discussed, with the emphasis of partially ordered states with chaotic itinerancy. First, clustering with bit structures in a hypercubic lattice is studied. Spontaneous formation and destruction of relevant bits are found, which give self-organizing, and chaotic genetic algorithms. When spontaneous changes of effective couplings are introduced, chaotic itinerancy of clusterings is widely seen through a feedback mechanism, which supports dynamic stability allowing for complexity and diversity, known as homeochaos. Second, synaptic dynamics of couplings is studied in relation with neural dynamics. The clustering structure is formed with a balance between external inputs and internal dynamics. Last, an extension allowing for the growth of the number of elements is given, in connection with cell differentiation. Effecti...

  9. The Biological Relevance of Artificial Life: Lessons from Artificial Intelligence

    Science.gov (United States)

    Colombano, Silvano

    2000-01-01

    There is no fundamental reason why A-life couldn't simply be a branch of computer science that deals with algorithms that are inspired by, or emulate biological phenomena. However, if these are the limits we place on this field, we miss the opportunity to help advance Theoretical Biology and to contribute to a deeper understanding of the nature of life. The history of Artificial Intelligence provides a good example, in that early interest in the nature of cognition quickly was lost to the process of building tools, such as "expert systems" that, were certainly useful, but provided little insight in the nature of cognition. Based on this lesson, I will discuss criteria for increasing the biological relevance of A-life and the probability that this field may provide a theoretical foundation for Biology.

  10. Biclustering Methods: Biological Relevance and Application in Gene Expression Analysis

    OpenAIRE

    Ali Oghabian; Sami Kilpinen; Sampsa Hautaniemi; Elena Czeizler

    2014-01-01

    DNA microarray technologies are used extensively to profile the expression levels of thousands of genes under various conditions, yielding extremely large data-matrices. Thus, analyzing this information and extracting biologically relevant knowledge becomes a considerable challenge. A classical approach for tackling this challenge is to use clustering (also known as one-way clustering) methods where genes (or respectively samples) are grouped together based on the similarity of their expressi...

  11. Behavior of nanoceria in biologically-relevant environments

    Energy Technology Data Exchange (ETDEWEB)

    Kumar, Amit; Das, Soumen; Munusamy, Prabhakaran; Self, William; Baer, Donald R.; Sayle, Dean C.; Seal, Sudipta

    2014-09-08

    Cerium oxide nanoparticles (CNPs) have gained a considerable attention in biological research due to their anti-oxidant like behaviour and regenerative nature. The current literature on CNPs reports many successful attempts on harnessing the beneficial therapeutic properties in biology. However studies have also shown toxicity effect with some types of CNPs. This review discusses issues associated with the behaviours of CNPs in biological systems and identifies key knowledge gaps. We explore how salient physicochemical properties (size, surface chemistry, surface stabilizers) contribute to the potential positive and negative aspects of nanoceria in biological systems. Based on variations of results reported in the literature, important issues need to be addressed. Are we really studying the same particles with slight variations in size and physicochemical properties or do the particles being examined have fundamentally different behaviours? Are the variations observed in the result of differences in the initial properties of the particles or the results of downstream effects that emerge as the particles are prepared for specific studies and they interact with biological or other environmental moieties? How should particles be appropriately prepared for relevant environmental/toxicology/safety studies? It is useful to recognize that nanoparticles encompass some of the same complexities and variability associated with biological components

  12. Hands-on-Entropy, Energy Balance with Biological Relevance

    Science.gov (United States)

    Reeves, Mark

    2015-03-01

    Entropy changes underlie the physics that dominates biological interactions. Indeed, introductory biology courses often begin with an exploration of the qualities of water that are important to living systems. However, one idea that is not explicitly addressed in most introductory physics or biology textbooks is important contribution of the entropy in driving fundamental biological processes towards equilibrium. From diffusion to cell-membrane formation, to electrostatic binding in protein folding, to the functioning of nerve cells, entropic effects often act to counterbalance deterministic forces such as electrostatic attraction and in so doing, allow for effective molecular signaling. A small group of biology, biophysics and computer science faculty have worked together for the past five years to develop curricular modules (based on SCALEUP pedagogy). This has enabled students to create models of stochastic and deterministic processes. Our students are first-year engineering and science students in the calculus-based physics course and they are not expected to know biology beyond the high-school level. In our class, they learn to reduce complex biological processes and structures in order model them mathematically to account for both deterministic and probabilistic processes. The students test these models in simulations and in laboratory experiments that are biologically relevant such as diffusion, ionic transport, and ligand-receptor binding. Moreover, the students confront random forces and traditional forces in problems, simulations, and in laboratory exploration throughout the year-long course as they move from traditional kinematics through thermodynamics to electrostatic interactions. This talk will present a number of these exercises, with particular focus on the hands-on experiments done by the students, and will give examples of the tangible material that our students work with throughout the two-semester sequence of their course on introductory

  13. Measuring Biological Parameters in Rivers: Relevance of the Spatial Scale

    International Nuclear Information System (INIS)

    The analyses of biological parameters in river ecosystems have been traditionally used as indicative of water quality with the advantage over chemical or physical analyses that they integrate the effects of punctual as well as long term effects. However, analyses of biological parameters (such as biomass and metabolism) performed at different spatial scales (from the microbial communities to the whole river) inform about different key processes. At the finer scale, microbial interactions and the structure of the microbial community (biofilm microbial biomass, three dimensional structure, and relevance of polysaccharide matrix) can be detected. At the reach scale, the different stream bed substrate (sediment, rocks, and particulate organic matter accumulation) are shown to play differential and specific roles on the processing of organic and inorganic materials in the flowing water. (Author)

  14. Mono Test

    Science.gov (United States)

    ... white blood cells and reactive lymphocytes on a blood smear in the presence of symptoms associated with mono indicates a likely diagnosis of infectious mononucleosis. A negative mono test requires ...

  15. What's Mono?

    Science.gov (United States)

    ... Quizzes Kids' Dictionary of Medical Words En Español What Other Kids Are Reading Back-to-School Butterflies? ... Got Homework? Here's Help White House Lunch Recipes What's Mono? KidsHealth > For Kids > What's Mono? Print A ...

  16. Synthesis and Biological Evaluation of Liguzinediol Mono- and Dual Ester Prodrugs as Promising Inotropic Agents

    Directory of Open Access Journals (Sweden)

    Jing Zhang

    2014-11-01

    Full Text Available The potent positive inotropic effect, together with the relatively low safety risk of liguzinediol (LZDO, relative to currently available inotropic drugs, has prompted us to intensively research and develop LZDO as a potent positive inotropic agent. In this study, to obtain LZDO alternatives for oral chronic administration, a series of long-chain fatty carboxylic mono- and dual-esters of LZDO were synthesized, and preliminarily evaluated for physicochemical properties and bioconversion. Enhanced lipophilic properties and decreased solubility of the prodrugs were observed as the side chain length increased. All esters showed conspicuous chemical stability in phosphate buffer (pH 7.4. Moreover, the enzymatic hydrolysis of esters in human plasma and human liver microsomes confirmed that the majority of esters were converted to LZDO, with release profiles that varied due to the size and structure of the side chain. In vivo pharmacokinetic studies following oral administration of monopivaloyl (M5, monodecyl (M10 and monododecyl (M12 esters demonstrated the evidently extended half-lives relative to LZDO dosed alone. In particular the monopivaloyl ester M5 exhibited an optimal pharmacokinetic profile with appropriate physiochemical characteristics.

  17. Medulloblastoma: Tumor Biology and Relevance to Treatment and Prognosis Paradigm.

    Science.gov (United States)

    Coluccia, Daniel; Figuereido, Carlyn; Isik, Semra; Smith, Christian; Rutka, James T

    2016-05-01

    Medulloblastoma is a malignant embryonic brain tumor arising in the posterior fossa and typically occurring in pediatric patients. Current multimodal treatment regimes have significantly improved the survival rates; however, a marked heterogeneity in therapy response is observed, and one third of all patients die within 5 years after diagnosis. Large-scale genetic and transcriptome analysis revealed four medulloblastoma subgroups (WNT, SHH, Group 3, and Group 4) associated with different demographic parameters, tumor manifestation, and clinical behavior. Future treatment protocols will integrate molecular classification schemes to evaluate subgroup-specific intensification or de-escalation of adjuvant therapies aimed to increase tumor control and reduce iatrogenic induced morbidity. Furthermore, the identification of genetic drivers allows assessing target therapies in order to increase the chemotherapeutic armamentarium. This review highlights the biology behind the current classification system and elucidates relevant aspects of the disease influencing forthcoming clinical trials. PMID:27021772

  18. Behavioural biology: an effective and relevant conservation tool.

    Science.gov (United States)

    Buchholz, Richard

    2007-08-01

    'Conservation behaviour' is a young discipline that investigates how proximate and ultimate aspects of the behaviour of an animal can be of value in preventing the loss of biodiversity. Rumours of its demise are unfounded. Conservation behaviour is quickly building a capacity to positively influence environmental decision making. The theoretical framework used by animal behaviourists is uniquely valuable to elucidating integrative solutions to human-wildlife conflicts, efforts to reintroduce endangered species and reducing the deleterious effects of ecotourism. Conservation behaviourists must join with other scientists under the multidisciplinary umbrella of conservation biology without giving up on their focus: the mechanisms, development, function and evolutionary history of individual differences in behaviour. Conservation behaviour is an increasingly relevant tool in the preservation of nature. PMID:17590477

  19. Biclustering methods: biological relevance and application in gene expression analysis.

    Science.gov (United States)

    Oghabian, Ali; Kilpinen, Sami; Hautaniemi, Sampsa; Czeizler, Elena

    2014-01-01

    DNA microarray technologies are used extensively to profile the expression levels of thousands of genes under various conditions, yielding extremely large data-matrices. Thus, analyzing this information and extracting biologically relevant knowledge becomes a considerable challenge. A classical approach for tackling this challenge is to use clustering (also known as one-way clustering) methods where genes (or respectively samples) are grouped together based on the similarity of their expression profiles across the set of all samples (or respectively genes). An alternative approach is to develop biclustering methods to identify local patterns in the data. These methods extract subgroups of genes that are co-expressed across only a subset of samples and may feature important biological or medical implications. In this study we evaluate 13 biclustering and 2 clustering (k-means and hierarchical) methods. We use several approaches to compare their performance on two real gene expression data sets. For this purpose we apply four evaluation measures in our analysis: (1) we examine how well the considered (bi)clustering methods differentiate various sample types; (2) we evaluate how well the groups of genes discovered by the (bi)clustering methods are annotated with similar Gene Ontology categories; (3) we evaluate the capability of the methods to differentiate genes that are known to be specific to the particular sample types we study and (4) we compare the running time of the algorithms. In the end, we conclude that as long as the samples are well defined and annotated, the contamination of the samples is limited, and the samples are well replicated, biclustering methods such as Plaid and SAMBA are useful for discovering relevant subsets of genes and samples. PMID:24651574

  20. Biclustering methods: biological relevance and application in gene expression analysis.

    Directory of Open Access Journals (Sweden)

    Ali Oghabian

    Full Text Available DNA microarray technologies are used extensively to profile the expression levels of thousands of genes under various conditions, yielding extremely large data-matrices. Thus, analyzing this information and extracting biologically relevant knowledge becomes a considerable challenge. A classical approach for tackling this challenge is to use clustering (also known as one-way clustering methods where genes (or respectively samples are grouped together based on the similarity of their expression profiles across the set of all samples (or respectively genes. An alternative approach is to develop biclustering methods to identify local patterns in the data. These methods extract subgroups of genes that are co-expressed across only a subset of samples and may feature important biological or medical implications. In this study we evaluate 13 biclustering and 2 clustering (k-means and hierarchical methods. We use several approaches to compare their performance on two real gene expression data sets. For this purpose we apply four evaluation measures in our analysis: (1 we examine how well the considered (biclustering methods differentiate various sample types; (2 we evaluate how well the groups of genes discovered by the (biclustering methods are annotated with similar Gene Ontology categories; (3 we evaluate the capability of the methods to differentiate genes that are known to be specific to the particular sample types we study and (4 we compare the running time of the algorithms. In the end, we conclude that as long as the samples are well defined and annotated, the contamination of the samples is limited, and the samples are well replicated, biclustering methods such as Plaid and SAMBA are useful for discovering relevant subsets of genes and samples.

  1. Identifying Biologically Relevant Cues in the Hydrologic Regime

    Science.gov (United States)

    Lovellford, R. M.; Flitcroft, R.; Santelmann, M. V.; Grant, G. E.; Safeeq, M.; Lewis, S.

    2012-12-01

    Seasonal variation in hydrologic discharge and temperature defines the availability, connectivity, and quality of lentic habitats. Native aquatic species are adapted to local hydrologic regimes , eg. magnitudes and rates of change . In recent decades, biologically relevant hydrologic conditions have been identified that are necessary to maintain habitat conditions for aquatic obligate species. Another element of hydrologic regimes important to aquatic species are the cues that inform individuals of seasonal changes that precipitate important physiological or behavioral alterations. There is a need for hydrologists, biologists, and ecologists, to define biologically significant cues within the hydrologic regime. Coho salmon (Onchorhynchus kisutch), an anadromous species of Pacific salmon, offers an example of sensitivity to environmental cues. Examinations of the run-timing of mature adult coho salmon on the North Umpqua River, OR, indicate that migration timing coincides with decreasing fall water temperatures prior to increasing winter discharge. For this species, adults leave the ocean ready to spawn. Adults need to spawn in small headwater streams prior to the onset of intense storm conditions that prohibit effective deposition or fertilization of eggs in redds (salmon nests).Therefore, the timing of spawning must be carefully executed. Understanding the cues that trigger specific behaviors gives insight to the processes that provide ecosystem stability and flexibility over time. Improved understanding of these cues may help us protect freshwater ecosystems and improve management for endangered species.

  2. Arbitrary protein−protein docking targets biologically relevant interfaces

    Directory of Open Access Journals (Sweden)

    Martin Juliette

    2012-05-01

    Full Text Available Abstract Background Protein-protein recognition is of fundamental importance in the vast majority of biological processes. However, it has already been demonstrated that it is very hard to distinguish true complexes from false complexes in so-called cross-docking experiments, where binary protein complexes are separated and the isolated proteins are all docked against each other and scored. Does this result, at least in part, reflect a physical reality? False complexes could reflect possible nonspecific or weak associations. Results In this paper, we investigate the twilight zone of protein-protein interactions, building on an interesting outcome of cross-docking experiments: false complexes seem to favor residues from the true interaction site, suggesting that randomly chosen partners dock in a non-random fashion on protein surfaces. Here, we carry out arbitrary docking of a non-redundant data set of 198 proteins, with more than 300 randomly chosen "probe" proteins. We investigate the tendency of arbitrary partners to aggregate at localized regions of the protein surfaces, the shape and compositional bias of the generated interfaces, and the potential of this property to predict biologically relevant binding sites. We show that the non-random localization of arbitrary partners after protein-protein docking is a generic feature of protein structures. The interfaces generated in this way are not systematically planar or curved, but tend to be closer than average to the center of the proteins. These results can be used to predict biological interfaces with an AUC value up to 0.69 alone, and 0.72 when used in combination with evolutionary information. An appropriate choice of random partners and number of docking models make this method computationally practical. It is also noted that nonspecific interfaces can point to alternate interaction sites in the case of proteins with multiple interfaces. We illustrate the usefulness of arbitrary docking

  3. Arbitrary protein−protein docking targets biologically relevant interfaces

    International Nuclear Information System (INIS)

    Protein-protein recognition is of fundamental importance in the vast majority of biological processes. However, it has already been demonstrated that it is very hard to distinguish true complexes from false complexes in so-called cross-docking experiments, where binary protein complexes are separated and the isolated proteins are all docked against each other and scored. Does this result, at least in part, reflect a physical reality? False complexes could reflect possible nonspecific or weak associations. In this paper, we investigate the twilight zone of protein-protein interactions, building on an interesting outcome of cross-docking experiments: false complexes seem to favor residues from the true interaction site, suggesting that randomly chosen partners dock in a non-random fashion on protein surfaces. Here, we carry out arbitrary docking of a non-redundant data set of 198 proteins, with more than 300 randomly chosen "probe" proteins. We investigate the tendency of arbitrary partners to aggregate at localized regions of the protein surfaces, the shape and compositional bias of the generated interfaces, and the potential of this property to predict biologically relevant binding sites. We show that the non-random localization of arbitrary partners after protein-protein docking is a generic feature of protein structures. The interfaces generated in this way are not systematically planar or curved, but tend to be closer than average to the center of the proteins. These results can be used to predict biological interfaces with an AUC value up to 0.69 alone, and 0.72 when used in combination with evolutionary information. An appropriate choice of random partners and number of docking models make this method computationally practical. It is also noted that nonspecific interfaces can point to alternate interaction sites in the case of proteins with multiple interfaces. We illustrate the usefulness of arbitrary docking using PEBP (Phosphatidylethanolamine binding

  4. Classifying transcription factor targets and discovering relevant biological features

    Directory of Open Access Journals (Sweden)

    DeLisi Charles

    2008-05-01

    Full Text Available Abstract Background An important goal in post-genomic research is discovering the network of interactions between transcription factors (TFs and the genes they regulate. We have previously reported the development of a supervised-learning approach to TF target identification, and used it to predict targets of 104 transcription factors in yeast. We now include a new sequence conservation measure, expand our predictions to include 59 new TFs, introduce a web-server, and implement an improved ranking method to reveal the biological features contributing to regulation. The classifiers combine 8 genomic datasets covering a broad range of measurements including sequence conservation, sequence overrepresentation, gene expression, and DNA structural properties. Principal Findings (1 Application of the method yields an amplification of information about yeast regulators. The ratio of total targets to previously known targets is greater than 2 for 11 TFs, with several having larger gains: Ash1(4, Ino2(2.6, Yaf1(2.4, and Yap6(2.4. (2 Many predicted targets for TFs match well with the known biology of their regulators. As a case study we discuss the regulator Swi6, presenting evidence that it may be important in the DNA damage response, and that the previously uncharacterized gene YMR279C plays a role in DNA damage response and perhaps in cell-cycle progression. (3 A procedure based on recursive-feature-elimination is able to uncover from the large initial data sets those features that best distinguish targets for any TF, providing clues relevant to its biology. An analysis of Swi6 suggests a possible role in lipid metabolism, and more specifically in metabolism of ceramide, a bioactive lipid currently being investigated for anti-cancer properties. (4 An analysis of global network properties highlights the transcriptional network hubs; the factors which control the most genes and the genes which are bound by the largest set of regulators. Cell-cycle and

  5. Characterization of Nanoparticle Aggregation in Biologically Relevant Fluids

    Science.gov (United States)

    McEnnis, Kathleen; Lahann, Joerg

    Nanoparticles (NPs) are often studied as drug delivery vehicles, but little is known about their behavior in blood once injected into animal models. If the NPs aggregate in blood, they will be shunted to the liver or spleen instead of reaching the intended target. The use of animals for these experiments is costly and raises ethical questions. Typically dynamic light scattering (DLS) is used to analyze aggregation behavior, but DLS cannot be used because the components of blood also scatter light. As an alternative, a method of analyzing NPs in biologically relevant fluids such as blood plasma has been developed using nanoparticle tracking analysis (NTA) with fluorescent filters. In this work, NTA was used to analyze the aggregation behavior of fluorescent polystyrene NPs with different surface modifications in blood plasma. It was expected that different surface chemistries on the particles will change the aggregation behavior. The effect of the surface modifications was investigated by quantifying the percentage of NPs in aggregates after addition to blood plasma. The use of this characterization method will allow for better understanding of particle behavior in the body, and potential problems, specifically aggregation, can be addressed before investing in in vivo studies.

  6. Natural killer cells: Biology, functions and clinical relevance

    Directory of Open Access Journals (Sweden)

    Vojvodić Svetlana

    2010-01-01

    Full Text Available Introduction. Natural Killer cells (NK cells represent the subset of peripheral lymphocytes that play critical role in the innate immune response to virus-infected and tumor transformed cells. Lysis of NK sensitive target cells could be mediated independently of antigen stimulation and without requirement of peptide presentation by the major histocompatibility complex (MHC molecules. NK cell activity and functions are controlled by a considerable number of cell surface receptors, which exist in both inhibitory and activating isoforms. There are several groups of NK cell surface receptors: 1 killer immunoglobulin like receptors-KIR, 2 C-type lectin receptors,3natural citotoxicity receptors-NCR and 4 Toll-like receptors-TLR. Functions of NK receptors. Defining the biology of NK cell surface receptors has contributed to the concept of the manner how NK cells selectively recognize and lyse tumor and virally infected cells while sparing normal cells. Further, identification of NK receptor ligands and their expression on the normal and transformed cells has led to the development of clinical approaches to manipulating receptor/ligand interactions that showed clinical benefit. NK cells are the first lymphocyte subset that reconstitute the peripheral blood following allogeneic HSCT and multiple roles for alloreactive donor NK cells have been demonstrated, in diminishing Graft vs. Host Disease (GvHD through selective killing recipient dendritic cells, prevention of graft rejection by killing recipient T cells and participation in Graft vs. Leukaemia (GvL effect through destruction of residual host tumor cells. Conclusion. Besides their role in HSCT, NK cell receptors have an important clinical relevance that reflects from the fact that they play a crucial role in the development of some diseases as well as in possibilities of managing all NK receptors through selective expansion and usage of NK cells in cancer immunotherapy.

  7. Commentary: Systems Biology and Its Relevance to Alcohol Research

    OpenAIRE

    Guo, Q. Max; Zakhari, Sam

    2008-01-01

    Systems biology, a new scientific discipline, aims to study the behavior of a biological organization or process in order to understand the function of a dynamic system. This commentary will put into perspective topics discussed in this issue of Alcohol Research & Health, provide insight into why alcohol-induced disorders exemplify the kinds of conditions for which a systems biological approach would be fruitful, and discuss the opportunities and challenges facing alcohol researchers.

  8. Reviewing the relevance of fluorescence in biological systems.

    Science.gov (United States)

    Lagorio, M Gabriela; Cordon, Gabriela B; Iriel, Analia

    2015-09-26

    Fluorescence is emitted by diverse living organisms. The analysis and interpretation of these signals may give information about their physiological state, ways of communication among species and the presence of specific chemicals. In this manuscript we review the state of the art in the research on the fluorescence emitted by plant leaves, fruits, flowers, avians, butterflies, beetles, dragonflies, millipedes, cockroaches, bees, spiders, scorpions and sea organisms and discuss its relevance in nature. PMID:26103563

  9. Arbitrary protein−protein docking targets biologically relevant interfaces

    OpenAIRE

    Martin Juliette; Lavery Richard

    2012-01-01

    Abstract Background Protein-protein recognition is of fundamental importance in the vast majority of biological processes. However, it has already been demonstrated that it is very hard to distinguish true complexes from false complexes in so-called cross-docking experiments, where binary protein complexes are separated and the isolated proteins are all docked against each other and scored. Does this result, at least in part, reflect a physical reality? False complexes could reflect possible ...

  10. Streptococcus pyogenes biofilms – formation, biology,and clinical relevance

    Directory of Open Access Journals (Sweden)

    Tomas eFiedler

    2015-02-01

    Full Text Available Streptococcus pyogenes (group A streptococci, GAS is an exclusive human bacterial pathogen. The virulence potential of this species is tremendous. Interactions with humans range from asymptomatic carriage over mild and superficial infections of skin and mucosal membranes up to systemic purulent toxic-invasive disease manifestations. Particularly the latter are a severe threat for predisposed patients and lead to significant death tolls worldwide. This places GAS among the most important Gram-positive bacterial pathogens. Many recent reviews have highlighted the GAS repertoire of virulence factors, regulators and regulatory circuits/networks that enable GAS to colonize the host and to deal with all levels of the host immune defense. This covers in vitro and in vivo studies, including animal infection studies based on mice and more relevant, macaque monkeys. It is now appreciated that GAS, like many other bacterial species, do not necessarily exclusively live in a planktonic lifestyle. GAS is capable of microcolony and biofilm formation on host cells and tissues. We are now beginning to understand that this feature significantly contributes to GAS pathogenesis. In this review we will discuss the current knowledge on GAS biofilm formation, the biofilm-phenotype associated virulence factors, regulatory aspects of biofilm formation, the clinical relevance, and finally contemporary treatment regimens and future treatment options.

  11. Student perception of relevance of biology content to everyday life: A study in higher education biology courses

    Science.gov (United States)

    Himschoot, Agnes Rose

    The purpose of this mixed method case study was to examine the effects of methods of instruction on students' perception of relevance in higher education non-biology majors' courses. Nearly ninety percent of all students in a liberal arts college are required to take a general biology course. It is proposed that for many of those students, this is the last science course they will take for life. General biology courses are suspected of discouraging student interest in biology with large enrollment, didactic instruction, covering a huge amount of content in one semester, and are charged with promoting student disengagement with biology by the end of the course. Previous research has been aimed at increasing student motivation and interest in biology as measured by surveys and test results. Various methods of instruction have been tested and show evidence of improved learning gains. This study focused on students' perception of relevance of biology content to everyday life and the methods of instruction that increase it. A quantitative survey was administered to assess perception of relevance pre and post instruction over three topics typically taught in a general biology course. A second quantitative survey of student experiences during instruction was administered to identify methods of instruction used in the course lecture and lab. While perception of relevance dropped in the study, qualitative focus groups provided insight into the surprising results by identifying topics that are more relevant than the ones chosen for the study, conveying the affects of the instructor's personal and instructional skills on student engagement, explanation of how active engagement during instruction promotes understanding of relevance, the roll of laboratory in promoting students' understanding of relevance as well as identifying external factors that affect student engagement. The study also investigated the extent to which gender affected changes in students' perception of

  12. Student Perception of Relevance of Biology Content to Everyday Life: A Study in Higher Education Biology Courses

    Science.gov (United States)

    Himschoot, Agnes Rose

    2012-01-01

    The purpose of this mixed method case study was to examine the effects of methods of instruction on students' perception of relevance in higher education non-biology majors' courses. Nearly ninety percent of all students in a liberal arts college are required to take a general biology course. It is proposed that for many of those students, this is…

  13. Biological Functional Relevance of Asymmetric Dimethylarginine (ADMA in Cardiovascular Disease

    Directory of Open Access Journals (Sweden)

    Sara Franceschelli

    2013-12-01

    Full Text Available There is growing evidence that increased levels of the endogenous NO synthase inhibitor asymmetric dimethylarginine (ADMA may contribute to endothelial dysfunction. Studies in animal models as well as in humans have suggested that the increase in ADMA occurs at a time when vascular disease has not yet become clinically evident. ADMA competitively inhibits NO elaboration by displacing L-arginine from NO synthase. In a concentration-dependent manner, it thereby interferes not only with endothelium-dependent, NO-mediated vasodilation, but also with other biological functions exerted by NO. The upshot may be a pro-atherogenic state. Recently, several studies have investigated the effect of various therapeutical interventions on ADMA plasma concentrations.

  14. FireDB: a compendium of biological and pharmacologically relevant ligands.

    Science.gov (United States)

    Maietta, Paolo; Lopez, Gonzalo; Carro, Angel; Pingilley, Benjamin J; Leon, Leticia G; Valencia, Alfonso; Tress, Michael L

    2014-01-01

    FireDB (http://firedb.bioinfo.cnio.es) is a curated inventory of catalytic and biologically relevant small ligand-binding residues culled from the protein structures in the Protein Data Bank. Here we present the important new additions since the publication of FireDB in 2007. The database now contains an extensive list of manually curated biologically relevant compounds. Biologically relevant compounds are informative because of their role in protein function, but they are only a small fraction of the entire ligand set. For the remaining ligands, the FireDB provides cross-references to the annotations from publicly available biological, chemical and pharmacological compound databases. FireDB now has external references for 95% of contacting small ligands, making FireDB a more complete database and providing the scientific community with easy access to the pharmacological annotations of PDB ligands. In addition to the manual curation of ligands, FireDB also provides insights into the biological relevance of individual binding sites. Here, biological relevance is calculated from the multiple sequence alignments of related binding sites that are generated from all-against-all comparison of each FireDB binding site. The database can be accessed by RESTful web services and is available for download via MySQL. PMID:24243844

  15. Biologically relevant mono- and di-nuclear manganese II/III/IV complexes of mononegative pentadentate ligands

    DEFF Research Database (Denmark)

    Baffert, Carole; Collomb, Marie-Nöelle; Deronzier, Alain;

    2003-01-01

    magnetic coupling interaction is weak and antiferromagnetic, J = -1.3(1) cm(-1). The dimeric structures of 1 and 2 are retained in solution and can exist in the gas phase. Complexes 1 and 2 are air stable but can be oxidised by (BuOOH)-Bu-t to give unstable mononuclear Mn(III) complexes, or oxo...... the highest oxidation state products detected, and these are formed via shorter-lived intermediate mu-oxo-dimanganese(III) compounds. The rate of formation of the various oxidized products is slower in the case of the bzgbpen(-) systems which contains a bulkier non-coordinating arm. The oxidised...... complexes were characterised by UV-visible spectroscopy, ESI mass spectrometry and cyclic voltammetry. In addition, III-IV and II-III species were electrochemically generated. Thus the new mononegative pentadentate ligand systems display significant flexibility in the range of Mn oxidation states and...

  16. Biologically relevant mono- and di-nuclear manganese II/III/IV complexes of mononegative pentadentate ligands

    DEFF Research Database (Denmark)

    Baffert, Carole; Collomb, Marie-Nöelle; Deronzier, Alain; Kjærgaard-Knudsen, Sanne; Latour, Jean-Marc; Lund, Kirsten H.; McKenzie, Christine J.; Mortensen, Martin; Nielsen, Lars Preuss; Thorup, Niels

    Manganese(II) complexes of mononegative pentadentate N4O ligands [Mn2(mgbpen)(2)(H2O)(2)](ClO4)(2) (1), (mgbpen(-) = N-methyl-N'-glycyl-N,N'-bis(2-pyridylmethyl)ethane-1,2-diamine) and [Mn-2(bzgbpen)(2)(H2O)(2)](ClO4)(2) ( 2), (bzgbpen(-)=N-benzyl-N'-glycyl-N,N'-bis(2-pyridylmethyl)ethane-1......,2-diamine) have been prepared. The crystal structure of the Mn(II)-aqua complex of 1, shows it to be dimeric via (mu-kappaO)-bridging through one carboxylate oxygen atom of each of the two ligands. The non-coordinated carboxylate oxygen atoms are H-bonded to the water ligands on the adjacent Mn ion. The......-bridged dimanganese(III) and di-mu-oxo-dimanganese(II) complexes, depending on solvent. The [Mn(III)-OR](+), R = H or CH3 complexes are generated in water or methanol, respectively, and are potentially useful spectroscopic models for active Mn-lipoxygenases. In acetonitrile, di-mu-oxo-dimanganese(II) complexes are...

  17. Comparative Analysis of Biologically Relevant Response Curves in Gene Expression Experiments: Heteromorphy, Heterochrony, and Heterometry

    OpenAIRE

    Baker, Stuart G.

    2014-01-01

    To gain biological insights, investigators sometimes compare sequences of gene expression measurements under two scenarios (such as two drugs or species). For this situation, we developed an algorithm to fit, identify, and compare biologically relevant response curves in terms of heteromorphy (different curves), heterochrony (different transition times), and heterometry (different magnitudes). The curves are flat, linear, sigmoid, hockey-stick (sigmoid missing a steady state), transient (sigm...

  18. V-type nerve agents phosphonylate ubiquitin at biologically relevant lysine residues and induce intramolecular cyclization by an isopeptide bond.

    Science.gov (United States)

    Schmidt, Christian; Breyer, Felicitas; Blum, Marc-Michael; Thiermann, Horst; Worek, Franz; John, Harald

    2014-08-01

    Toxic organophosphorus compounds (e.g., pesticides and nerve agents) are known to react with nucleophilic side chains of different amino acids (phosphylation), thus forming adducts with endogenous proteins. Most often binding to serine, tyrosine, or threonine residues is described as being of relevance for toxicological effects (e.g., acetylcholinesterase and neuropathy target esterase) or as biomarkers for post-exposure analysis (verification, e.g., albumin and butyrylcholinesterase). Accordingly, identification of novel protein targets might be beneficial for a better understanding of the toxicology of these compounds, revealing new bioanalytical verification tools, and improving knowledge on chemical reactivity. In the present study, we investigated the reaction of ubiquitin (Ub) with the V-type nerve agents Chinese VX, Russian VX, and VX in vitro. Ub is a ubiquitous protein with a mass of 8564.8 Da present in the extra- and intracellular space that plays an important physiological role in several essential processes (e.g., proteasomal degradation, DNA repair, protein turnover, and endocytosis). Reaction products were analyzed by matrix-assisted laser desorption/ionization-time-of-flight- mass spectrometry (MALDI-TOF MS) and μ-high-performance liquid chromatography online coupled to UV-detection and electrospray ionization MS (μHPLC-UV/ESI MS). Our results originally document that a complex mixture of at least mono-, di, and triphosphonylated Ub adducts was produced. Surprisingly, peptide mass fingerprint analysis in combination with MALDI and ESI MS/MS revealed that phosphonylation occurred with high selectivity in at least 6 of 7 surface-exposed lysine residues that are essential for the biological function of Ub. These reaction products were found not to age. In addition, we herein report for the first time that phosphonylation induced intramolecular cyclization by formation of an isopeptide bond between the ε-amino group of a formerly phosphonylated

  19. Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

    OpenAIRE

    Besse Philippe; Boitard Simon; Lê Cao Kim-Anh

    2011-01-01

    Abstract Background Variable selection on high throughput biological data, such as gene expression or single nucleotide polymorphisms (SNPs), becomes inevitable to select relevant information and, therefore, to better characterize diseases or assess genetic structure. There are different ways to perform variable selection in large data sets. Statistical tests are commonly used to identify differentially expressed features for explanatory purposes, whereas Machine Learning wrapper approaches c...

  20. Making developmental biology relevant to undergraduates in an era of economic rationalism in Australia.

    Science.gov (United States)

    Key, Brian; Nurcombe, Victor

    2003-01-01

    This report describes the road map we followed at our university to accommodate three main factors: financial pressure within the university system; desire to enhance the learning experience of undergraduates; and motivation to increase the prominence of the discipline of developmental biology in our university. We engineered a novel, multi-year undergraduate developmental biology program which was "student-oriented," ensuring that students were continually exposed to the underlying principles and philosophy of this discipline throughout their undergraduate career. Among its key features are introductory lectures in core courses in the first year, which emphasize the relevance of developmental biology to tissue engineering, reproductive medicine, therapeutic approaches in medicine, agriculture and aquaculture. State-of-the-art animated computer graphics and images of high visual impact are also used. In addition, students are streamed into the developmental biology track in the second year, using courses like human embryology and courses shared with cell biology, which include practicals based on modern experimental approaches. Finally, fully dedicated third-year courses in developmental biology are undertaken in conjunction with stand-alone practical courses where students experiencefirst-hand work in a research laboratory. Our philosophy is a "cradle-to-grave" approach to the education of undergraduates so as to prepare highly motivated, enthusiastic and well-educated developmental biologists for entry into graduate programs and ultimately post-doctoral research. PMID:12705657

  1. Endometrial stromal polyps in rodents: biology, etiology, and relevance to disease in women.

    Science.gov (United States)

    Davis, Barbara

    2012-04-01

    Endometrial stromal polyps (ESP) are a common spontaneous reproductive tract lesion in the female rat. However, there is limited information concerning the etiology, biology, and significance of these polyps as an end point in toxicology and carcinogenicity studies. This paper reviews relevant literature to address these aspects of ESP with respect to potential relevance to human uterine tumors. Endometrial stromal polyps in rodents appear as age-related lesions. There are only a few chemicals tested for carcinogenicity in rat and mouse cancer bioassays associated with increased incidence of ESP with no common characteristics or mechanism of action. Uterine endometrial polyps that occur in women and the uterine stromal polyps that occur in rodents have distinct characteristics, although both types of uterine lesions are common, benign, and noncancerous. Human endometrial polyps develop from both endometrial and stromal components, whereas rodent polyps develop from the stromal component of the uterus. Endometrial polyps in women are hormone sensitive, but there is no scientific or experimental evidence to date that suggests that uterine stromal polyps in rodents are hormone sensitive. Therefore, based on differences in their etiology and biology, endometrial stromal polyps observed in rodent toxicity and carcinogenicity studies appear to have limited relevance to human endometrial polyps occurring in women. PMID:22215514

  2. Modelling low energy electron and positron tracks in biologically relevant media

    International Nuclear Information System (INIS)

    This colloquium describes an approach to incorporate into radiation damage models the effect of low and intermediate energy (0-100 eV) electrons and positrons, slowing down in biologically relevant materials (water and representative biomolecules). The core of the modelling procedure is a C++ computing programme named 'Low Energy Particle Track Simulation (LEPTS)', which is compatible with available general purpose Monte Carlo packages. Input parameters are carefully selected from theoretical and experimental cross section data and energy loss distribution functions. Data sources used for this purpose are reviewed showing examples of electron and positron cross section and energy loss data for interactions with different media of increasing complexity: atoms, molecules, clusters and condense matter. Finally, we show how such a model can be used to develop an effective dosimetric tool at the molecular level (i.e. nanodosimetry). Recent experimental developments to study the fragmentation induced in biologically material by charge transfer from neutrals and negative ions are also included. (authors)

  3. Nuclear Quantum Effects in the Dynamics of Biologically Relevant Systems from First Principles

    Science.gov (United States)

    Rossi, Mariana; Fang, Wei; Michaelides, Angelos

    Understanding the structure and dynamics of biomolecules is crucial for unveiling the physics behind biology-related processes. These molecules are very flexible and stabilized by a delicate balance of weak (quantum) interactions, thus requiring the inclusion of anharmonic entropic contributions and an accurate description of the electronic and nuclear structure from quantum mechanics. We here join state of the art density-functional theory (DFT) and path integral molecular dynamics (PIMD) to gain quantitative insight into biologically relevant systems. Our design of a better and more efficient approximation to quantum time correlation functions based on PIMD (TRPMD) enables the calculation of ab initio TCFs with which we calculate IR/vibrational spectra and diffusion coefficients. In stacked polyglutamine strands (structures often related to amyloid diseases) a combination of NQE and H-bond cooperativity provides a small free energy stabilization that we connect to a softening of high frequency modes, enhanced by nuclear quantum anharmonicity [3].

  4. KDAC8 substrate specificity quantified by a biologically relevant, label-free deacetylation assay.

    Science.gov (United States)

    Toro, Tasha B; Watt, Terry J

    2015-12-01

    Analysis of the human proteome has identified thousands of unique protein sequences that contain acetylated lysine residues in vivo. These modifications regulate a variety of biological processes and are reversed by the lysine deacetylase (KDAC) family of enzymes. Despite the known prevalence and importance of acetylation, the details of KDAC substrate recognition are not well understood. While several methods have been developed to monitor protein deacetylation, none are particularly suited for identifying enzyme-substrate pairs of label-free substrates across the entire family of lysine deacetylases. Here, we present a fluorescamine-based assay which is more biologically relevant than existing methods and amenable to probing substrate specificity. Using this assay, we evaluated the activity of KDAC8 and other lysine deacetylases, including a sirtuin, for several peptides derived from known acetylated proteins. KDAC8 showed clear preferences for some peptides over others, indicating that the residues immediately surrounding the acetylated lysine play an important role in substrate specificity. Steady-state kinetics suggest that the sequence surrounding the acetylated lysine affects binding affinity and catalytic rate independently. Our results provide direct evidence that potential KDAC8 substrates previously identified through cell based experiments can be directly deacetylated by KDAC8. Conversely, the data from this assay did not correlate well with predictions from previous screens for KDAC8 substrates using less biologically relevant substrates and assay conditions. Combining results from our assay with mass spectrometry-based experiments and cell-based experiments will allow the identification of specific KDAC-substrate pairs and lead to a better understanding of the biological consequences of these interactions. PMID:26402585

  5. Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

    Directory of Open Access Journals (Sweden)

    Besse Philippe

    2011-06-01

    Full Text Available Abstract Background Variable selection on high throughput biological data, such as gene expression or single nucleotide polymorphisms (SNPs, becomes inevitable to select relevant information and, therefore, to better characterize diseases or assess genetic structure. There are different ways to perform variable selection in large data sets. Statistical tests are commonly used to identify differentially expressed features for explanatory purposes, whereas Machine Learning wrapper approaches can be used for predictive purposes. In the case of multiple highly correlated variables, another option is to use multivariate exploratory approaches to give more insight into cell biology, biological pathways or complex traits. Results A simple extension of a sparse PLS exploratory approach is proposed to perform variable selection in a multiclass classification framework. Conclusions sPLS-DA has a classification performance similar to other wrapper or sparse discriminant analysis approaches on public microarray and SNP data sets. More importantly, sPLS-DA is clearly competitive in terms of computational efficiency and superior in terms of interpretability of the results via valuable graphical outputs. sPLS-DA is available in the R package mixOmics, which is dedicated to the analysis of large biological data sets.

  6. Inactivation of the antibacterial and cytotoxic properties of silver ions by biologically relevant compounds.

    Directory of Open Access Journals (Sweden)

    Geraldine Mulley

    Full Text Available There has been a recent surge in the use of silver as an antimicrobial agent in a wide range of domestic and clinical products, intended to prevent or treat bacterial infections and reduce bacterial colonization of surfaces. It has been reported that the antibacterial and cytotoxic properties of silver are affected by the assay conditions, particularly the type of growth media used in vitro. The toxicity of Ag+ to bacterial cells is comparable to that of human cells. We demonstrate that biologically relevant compounds such as glutathione, cysteine and human blood components significantly reduce the toxicity of silver ions to clinically relevant pathogenic bacteria and primary human dermal fibroblasts (skin cells. Bacteria are able to grow normally in the presence of silver nitrate at >20-fold the minimum inhibitory concentration (MIC if Ag+ and thiols are added in a 1:1 ratio because the reaction of Ag+ with extracellular thiols prevents silver ions from interacting with cells. Extracellular thiols and human serum also significantly reduce the antimicrobial activity of silver wound dressings Aquacel-Ag (Convatec and Acticoat (Smith & Nephew to Staphylococcus aureus, Pseudomonas aeruginosa and Escherichia coli in vitro. These results have important implications for the deployment of silver as an antimicrobial agent in environments exposed to biological tissue or secretions. Significant amounts of money and effort have been directed at the development of silver-coated medical devices (e.g. dressings, catheters, implants. We believe our findings are essential for the effective design and testing of antimicrobial silver coatings.

  7. Solid-supported synthesis: From pharmacologically relevant heterocycles to biologically active surfaces

    DEFF Research Database (Denmark)

    Komnatnyy, Vitaly V.

    The present PhD thesis consists of an introduction part and two separate parts covering selected research projects during the PhD study. The introduction part describes the concept of solid-supported synthesis and combinatorial chemistry. The chapter covers recent achievements in materials...... for solid-phase synthesis, methods for on - and off-bead screening of combinatorial libraries and their applic ation to various biological targets. The first part of the thesis is dedicated to the development of methodology for the synthesis of structurally diverse heterocyclic scaffolds via N......-acyliminium intermediates on solid support. In Chapter 1.1, an intermolecular Mannich -type reaction of solid-supported N- acyliminium ions is reported. The method is useful for the solid -supported synthesis of substituted ?-lactames , which constitute a class of pharmacologically relevant small molecule scaffolds...

  8. Biologically relevant molecular transducer with increased computing power and iterative abilities.

    Science.gov (United States)

    Ratner, Tamar; Piran, Ron; Jonoska, Natasha; Keinan, Ehud

    2013-05-23

    As computing devices, which process data and interconvert information, transducers can encode new information and use their output for subsequent computing, offering high computational power that may be equivalent to a universal Turing machine. We report on an experimental DNA-based molecular transducer that computes iteratively and produces biologically relevant outputs. As a proof of concept, the transducer accomplished division of numbers by 3. The iterative power was demonstrated by a recursive application on an obtained output. This device reads plasmids as input and processes the information according to a predetermined algorithm, which is represented by molecular software. The device writes new information on the plasmid using hardware that comprises DNA-manipulating enzymes. The computation produces dual output: a quotient, represented by newly encoded DNA, and a remainder, represented by E. coli phenotypes. This device algorithmically manipulates genetic codes. PMID:23706637

  9. Biologically relevant photoacoustic imaging phantoms with tunable optical and acoustic properties.

    Science.gov (United States)

    Vogt, William C; Jia, Congxian; Wear, Keith A; Garra, Brian S; Joshua Pfefer, T

    2016-10-01

    Established medical imaging technologies such as magnetic resonance imaging and computed tomography rely on well-validated tissue-simulating phantoms for standardized testing of device image quality. The availability of high-quality phantoms for optical-acoustic diagnostics such as photoacoustic tomography (PAT) will facilitate standardization and clinical translation of these emerging approaches. Materials used in prior PAT phantoms do not provide a suitable combination of long-term stability and realistic acoustic and optical properties. Therefore, we have investigated the use of custom polyvinyl chloride plastisol (PVCP) formulations for imaging phantoms and identified a dual-plasticizer approach that provides biologically relevant ranges of relevant properties. Speed of sound and acoustic attenuation were determined over a frequency range of 4 to 9 MHz and optical absorption and scattering over a wavelength range of 400 to 1100 nm. We present characterization of several PVCP formulations, including one designed to mimic breast tissue. This material is used to construct a phantom comprised of an array of cylindrical, hemoglobin-filled inclusions for evaluation of penetration depth. Measurements with a custom near-infrared PAT imager provide quantitative and qualitative comparisons of phantom and tissue images. Results indicate that our PVCP material is uniquely suitable for PAT system image quality evaluation and may provide a practical tool for device validation and intercomparison. PMID:26886681

  10. Comparative Analysis of Biologically Relevant Response Curves in Gene Expression Experiments: Heteromorphy, Heterochrony, and Heterometry

    Directory of Open Access Journals (Sweden)

    Stuart G. Baker

    2014-02-01

    Full Text Available To gain biological insights, investigators sometimes compare sequences of gene expression measurements under two scenarios (such as two drugs or species. For this situation, we developed an algorithm to fit, identify, and compare biologically relevant response curves in terms of heteromorphy (different curves, heterochrony (different transition times, and heterometry (different magnitudes. The curves are flat, linear, sigmoid, hockey-stick (sigmoid missing a steady state, transient (sigmoid missing two steady states, impulse (with peak or trough, step (with intermediate-level plateau, impulse+ (impulse with an extra parameter, step+ (step with an extra parameter, further characterized by upward or downward trend. To reduce overfitting, we fit the curves to every other response, evaluated the fit in the remaining responses, and identified the most parsimonious curves that yielded a good fit. We measured goodness of fit using a statistic comparable over different genes, namely the square root of the mean squared prediction error as a percentage of the range of responses, which we call the relative prediction error (RPE. We illustrated the algorithm using data on gene expression at 14 times in the embryonic development in two species of frogs. Software written in Mathematica is freely available.

  11. Modelling low energy electron and positron tracks in biologically relevant media

    Science.gov (United States)

    Blanco, Francisco; Muñoz, Antonio; Almeida, Diogo; Ferreira da Silva, Filipe; Limão-Vieira, Paulo; Fuss, Martina C.; Sanz, Ana G.; García, Gustavo

    2013-09-01

    This colloquium describes an approach to incorporate into radiation damage models the effect of low and intermediate energy (0-100 eV) electrons and positrons, slowing down in biologically relevant materials (water and representative biomolecules). The core of the modelling procedure is a C++ computing programme named “Low Energy Particle Track Simulation (LEPTS)”, which is compatible with available general purpose Monte Carlo packages. Input parameters are carefully selected from theoretical and experimental cross section data and energy loss distribution functions. Data sources used for this purpose are reviewed showing examples of electron and positron cross section and energy loss data for interactions with different media of increasing complexity: atoms, molecules, clusters and condense matter. Finally, we show how such a model can be used to develop an effective dosimetric tool at the molecular level (i.e. nanodosimetry). Recent experimental developments to study the fragmentation induced in biologically material by charge transfer from neutrals and negative ions are also included.

  12. The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013.

    Science.gov (United States)

    Hastings, Janna; de Matos, Paula; Dekker, Adriano; Ennis, Marcus; Harsha, Bhavana; Kale, Namrata; Muthukrishnan, Venkatesh; Owen, Gareth; Turner, Steve; Williams, Mark; Steinbeck, Christoph

    2013-01-01

    ChEBI (http://www.ebi.ac.uk/chebi) is a database and ontology of chemical entities of biological interest. Over the past few years, ChEBI has continued to grow steadily in content, and has added several new features. In addition to incorporating all user-requested compounds, our annotation efforts have emphasized immunology, natural products and metabolites in many species. All database entries are now 'is_a' classified within the ontology, meaning that all of the chemicals are available to semantic reasoning tools that harness the classification hierarchy. We have completely aligned the ontology with the Open Biomedical Ontologies (OBO) Foundry-recommended upper level Basic Formal Ontology. Furthermore, we have aligned our chemical classification with the classification of chemical-involving processes in the Gene Ontology (GO), and as a result of this effort, the majority of chemical-involving processes in GO are now defined in terms of the ChEBI entities that participate in them. This effort necessitated incorporating many additional biologically relevant compounds. We have incorporated additional data types including reference citations, and the species and component for metabolites. Finally, our website and web services have had several enhancements, most notably the provision of a dynamic new interactive graph-based ontology visualization. PMID:23180789

  13. Mono Lake Excursion Reviewed

    Science.gov (United States)

    Liddicoat, J. C.; Coe, R. S.

    2007-05-01

    The Mono Lake Excursion as recorded in the Mono Basin, CA, has an older part that is about negative 30 degrees inclination and about 300 degrees declination during low relative field intensity. Those paleomagnetic directions are closely followed by greater than 80 degrees positive inclination and east declination of about 100 degrees during higher relative field intensity. A path of the Virtual Geomagnetic Poles (VGPs) for the older part followed from old to young forms a large clockwise loop that reaches 35 degrees N latitude and is centered at about 35 degrees E longitude. That loop is followed by a smaller one that is counterclockwise and centered at about 70 degrees N latitude and 270 degrees E longitude (Denham & Cox, 1971; Denham, 1974; Liddicoat & Coe, 1979). The Mono Lake Excursion outside the Mono Basin in western North America is recorded as nearly the full excursion at Summer Lake, OR (Negrini et al., 1984), and as the younger portion of steep positive inclination/east declination in the Lahontan Basin, NV. The overall relative field intensity during the Mono Lake Excursion in the Lahontan Basin mirrors very closely the relative field intensity in the Mono Basin (Liddicoat, 1992, 1996; Coe & Liddicoat, 1994). Using 14C and 40Ar/39Ar dates (Kent et al., 2002) and paleoclimate and relative paleointensity records (Zimmerman et al., 2006) for the Mono Lake Excursion in the Mono Basin, it has been proposed that the Mono Lake Excursion might be older than originally believed and instead be the Laschamp Excursion at about 40,000 yrs B.P. (Guillou et al., 2004). On the contrary, we favor a younger age for the Mono Lake Excursion, about 32,000 yrs B.P., using the relative paleointensity in the Mono Basin and Lahontan Basin and 14C dates from the Lahontan Basin (Benson et al., 2002). The age of about 32,000 yrs B.P. is also in accord with the age (32,000- 34,000 yrs B.P.) reported by Channell (2006) for the Mono Lake Excursion at ODP Site 919 in the Irminger Basin

  14. Messina: a novel analysis tool to identify biologically relevant molecules in disease.

    Directory of Open Access Journals (Sweden)

    Mark Pinese

    Full Text Available BACKGROUND: Morphologically similar cancers display heterogeneous patterns of molecular aberrations and follow substantially different clinical courses. This diversity has become the basis for the definition of molecular phenotypes, with significant implications for therapy. Microarray or proteomic expression profiling is conventionally employed to identify disease-associated genes, however, traditional approaches for the analysis of profiling experiments may miss molecular aberrations which define biologically relevant subtypes. METHODOLOGY/PRINCIPAL FINDINGS: Here we present Messina, a method that can identify those genes that only sometimes show aberrant expression in cancer. We demonstrate with simulated data that Messina is highly sensitive and specific when used to identify genes which are aberrantly expressed in only a proportion of cancers, and compare Messina to contemporary analysis techniques. We illustrate Messina by using it to detect the aberrant expression of a gene that may play an important role in pancreatic cancer. CONCLUSIONS/SIGNIFICANCE: Messina allows the detection of genes with profiles typical of markers of molecular subtype, and complements existing methods to assist the identification of such markers. Messina is applicable to any global expression profiling data, and to allow its easy application has been packaged into a freely-available stand-alone software package.

  15. Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function.

    Science.gov (United States)

    Pattaro, Cristian; Teumer, Alexander; Gorski, Mathias; Chu, Audrey Y; Li, Man; Mijatovic, Vladan; Garnaas, Maija; Tin, Adrienne; Sorice, Rossella; Li, Yong; Taliun, Daniel; Olden, Matthias; Foster, Meredith; Yang, Qiong; Chen, Ming-Huei; Pers, Tune H; Johnson, Andrew D; Ko, Yi-An; Fuchsberger, Christian; Tayo, Bamidele; Nalls, Michael; Feitosa, Mary F; Isaacs, Aaron; Dehghan, Abbas; d'Adamo, Pio; Adeyemo, Adebowale; Dieffenbach, Aida Karina; Zonderman, Alan B; Nolte, Ilja M; van der Most, Peter J; Wright, Alan F; Shuldiner, Alan R; Morrison, Alanna C; Hofman, Albert; Smith, Albert V; Dreisbach, Albert W; Franke, Andre; Uitterlinden, Andre G; Metspalu, Andres; Tonjes, Anke; Lupo, Antonio; Robino, Antonietta; Johansson, Åsa; Demirkan, Ayse; Kollerits, Barbara; Freedman, Barry I; Ponte, Belen; Oostra, Ben A; Paulweber, Bernhard; Krämer, Bernhard K; Mitchell, Braxton D; Buckley, Brendan M; Peralta, Carmen A; Hayward, Caroline; Helmer, Catherine; Rotimi, Charles N; Shaffer, Christian M; Müller, Christian; Sala, Cinzia; van Duijn, Cornelia M; Saint-Pierre, Aude; Ackermann, Daniel; Shriner, Daniel; Ruggiero, Daniela; Toniolo, Daniela; Lu, Yingchang; Cusi, Daniele; Czamara, Darina; Ellinghaus, David; Siscovick, David S; Ruderfer, Douglas; Gieger, Christian; Grallert, Harald; Rochtchina, Elena; Atkinson, Elizabeth J; Holliday, Elizabeth G; Boerwinkle, Eric; Salvi, Erika; Bottinger, Erwin P; Murgia, Federico; Rivadeneira, Fernando; Ernst, Florian; Kronenberg, Florian; Hu, Frank B; Navis, Gerjan J; Curhan, Gary C; Ehret, George B; Homuth, Georg; Coassin, Stefan; Thun, Gian-Andri; Pistis, Giorgio; Gambaro, Giovanni; Malerba, Giovanni; Montgomery, Grant W; Eiriksdottir, Gudny; Jacobs, Gunnar; Li, Guo; Wichmann, H-Erich; Campbell, Harry; Schmidt, Helena; Wallaschofski, Henri; Völzke, Henry; Brenner, Hermann; Kroemer, Heyo K; Kramer, Holly; Lin, Honghuang; Leach, I Mateo; Ford, Ian; Guessous, Idris; Rudan, Igor; Prokopenko, Inga; Borecki, Ingrid; Heid, Iris M; Kolcic, Ivana; Persico, Ivana; Jukema, J Wouter; Wilson, James F; Felix, Janine F; Divers, Jasmin; Lambert, Jean-Charles; Stafford, Jeanette M; Gaspoz, Jean-Michel; Smith, Jennifer A; Faul, Jessica D; Wang, Jie Jin; Ding, Jingzhong; Hirschhorn, Joel N; Attia, John; Whitfield, John B; Chalmers, John; Viikari, Jorma; Coresh, Josef; Denny, Joshua C; Karjalainen, Juha; Fernandes, Jyotika K; Endlich, Karlhans; Butterbach, Katja; Keene, Keith L; Lohman, Kurt; Portas, Laura; Launer, Lenore J; Lyytikäinen, Leo-Pekka; Yengo, Loic; Franke, Lude; Ferrucci, Luigi; Rose, Lynda M; Kedenko, Lyudmyla; Rao, Madhumathi; Struchalin, Maksim; Kleber, Marcus E; Cavalieri, Margherita; Haun, Margot; Cornelis, Marilyn C; Ciullo, Marina; Pirastu, Mario; de Andrade, Mariza; McEvoy, Mark A; Woodward, Mark; Adam, Martin; Cocca, Massimiliano; Nauck, Matthias; Imboden, Medea; Waldenberger, Melanie; Pruijm, Menno; Metzger, Marie; Stumvoll, Michael; Evans, Michele K; Sale, Michele M; Kähönen, Mika; Boban, Mladen; Bochud, Murielle; Rheinberger, Myriam; Verweij, Niek; Bouatia-Naji, Nabila; Martin, Nicholas G; Hastie, Nick; Probst-Hensch, Nicole; Soranzo, Nicole; Devuyst, Olivier; Raitakari, Olli; Gottesman, Omri; Franco, Oscar H; Polasek, Ozren; Gasparini, Paolo; Munroe, Patricia B; Ridker, Paul M; Mitchell, Paul; Muntner, Paul; Meisinger, Christa; Smit, Johannes H; Kovacs, Peter; Wild, Philipp S; Froguel, Philippe; Rettig, Rainer; Mägi, Reedik; Biffar, Reiner; Schmidt, Reinhold; Middelberg, Rita P S; Carroll, Robert J; Penninx, Brenda W; Scott, Rodney J; Katz, Ronit; Sedaghat, Sanaz; Wild, Sarah H; Kardia, Sharon L R; Ulivi, Sheila; Hwang, Shih-Jen; Enroth, Stefan; Kloiber, Stefan; Trompet, Stella; Stengel, Benedicte; Hancock, Stephen J; Turner, Stephen T; Rosas, Sylvia E; Stracke, Sylvia; Harris, Tamara B; Zeller, Tanja; Zemunik, Tatijana; Lehtimäki, Terho; Illig, Thomas; Aspelund, Thor; Nikopensius, Tiit; Esko, Tonu; Tanaka, Toshiko; Gyllensten, Ulf; Völker, Uwe; Emilsson, Valur; Vitart, Veronique; Aalto, Ville; Gudnason, Vilmundur; Chouraki, Vincent; Chen, Wei-Min; Igl, Wilmar; März, Winfried; Koenig, Wolfgang; Lieb, Wolfgang; Loos, Ruth J F; Liu, Yongmei; Snieder, Harold; Pramstaller, Peter P; Parsa, Afshin; O'Connell, Jeffrey R; Susztak, Katalin; Hamet, Pavel; Tremblay, Johanne; de Boer, Ian H; Böger, Carsten A; Goessling, Wolfram; Chasman, Daniel I; Köttgen, Anna; Kao, W H Linda; Fox, Caroline S

    2016-01-01

    Reduced glomerular filtration rate defines chronic kidney disease and is associated with cardiovascular and all-cause mortality. We conducted a meta-analysis of genome-wide association studies for estimated glomerular filtration rate (eGFR), combining data across 133,413 individuals with replication in up to 42,166 individuals. We identify 24 new and confirm 29 previously identified loci. Of these 53 loci, 19 associate with eGFR among individuals with diabetes. Using bioinformatics, we show that identified genes at eGFR loci are enriched for expression in kidney tissues and in pathways relevant for kidney development and transmembrane transporter activity, kidney structure, and regulation of glucose metabolism. Chromatin state mapping and DNase I hypersensitivity analyses across adult tissues demonstrate preferential mapping of associated variants to regulatory regions in kidney but not extra-renal tissues. These findings suggest that genetic determinants of eGFR are mediated largely through direct effects within the kidney and highlight important cell types and biological pathways. PMID:26831199

  16. Discrimination between biologically relevant calcium phosphate phases by surface-analytical techniques

    International Nuclear Information System (INIS)

    The spatially resolved phase identification of biologically relevant calcium phosphate phases (CPPs) in bone tissue is essential for the elucidation of bone remodeling mechanisms and for the diagnosis of bone diseases. Analytical methods with high spatial resolution for the discrimination between chemically quite close phases are rare. Therefore the applicability of state-of-the-art ToF-SIMS, XPS and EDX as chemically specific techniques was investigated. The eight CPPs hydroxyapatite (HAP), β-tricalcium phosphate (β-TCP), α-tricalcium phosphate (α-TCP), octacalcium phosphate (OCP), dicalcium phosphate dihydrate (DCPD), dicalcium phosphate (DCP), monocalcium phosphate (MCP) and amorphous calcium phosphate (ACP) were either commercial materials in high purity or synthesized by ourselves. The phase purity was proven by XRD analysis. All of the eight CPPs show different mass spectra and the phases can be discriminated by applying the principal component analysis method to the mass spectrometric data. The Ca/P ratios of all phosphates were determined by XPS and EDX. With both methods some CPPs can be distinguished, but the obtained Ca/P ratios deviate systematically from their theoretical values. It is necessary in any case to determine a calibration curve, respectively the ZAF values, from appropriate standards. In XPS also the O(1s)-satellite signals are correlated to the CPPs composition. Angle resolved and long-term XPS measurements of HAP clearly prove that there is no phosphate excess at the surface. Decomposition due to X-ray irradiation has not been observed.

  17. Action video game players' visual search advantage extends to biologically relevant stimuli.

    Science.gov (United States)

    Chisholm, Joseph D; Kingstone, Alan

    2015-07-01

    Research investigating the effects of action video game experience on cognition has demonstrated a host of performance improvements on a variety of basic tasks. Given the prevailing evidence that these benefits result from efficient control of attentional processes, there has been growing interest in using action video games as a general tool to enhance everyday attentional control. However, to date, there is little evidence indicating that the benefits of action video game playing scale up to complex settings with socially meaningful stimuli - one of the fundamental components of our natural environment. The present experiment compared action video game player (AVGP) and non-video game player (NVGP) performance on an oculomotor capture task that presented participants with face stimuli. In addition, the expression of a distractor face was manipulated to assess if action video game experience modulated the effect of emotion. Results indicate that AVGPs experience less oculomotor capture than NVGPs; an effect that was not influenced by the emotional content depicted by distractor faces. It is noteworthy that this AVGP advantage emerged despite participants being unaware that the investigation had to do with video game playing, and participants being equivalent in their motivation and treatment of the task as a game. The results align with the notion that action video game experience is associated with superior attentional and oculomotor control, and provides evidence that these benefits can generalize to more complex and biologically relevant stimuli. PMID:26071923

  18. Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function

    Science.gov (United States)

    Pattaro, Cristian; Teumer, Alexander; Gorski, Mathias; Chu, Audrey Y.; Li, Man; Mijatovic, Vladan; Garnaas, Maija; Tin, Adrienne; Sorice, Rossella; Li, Yong; Taliun, Daniel; Olden, Matthias; Foster, Meredith; Yang, Qiong; Chen, Ming-Huei; Pers, Tune H.; Johnson, Andrew D.; Ko, Yi-An; Fuchsberger, Christian; Tayo, Bamidele; Nalls, Michael; Feitosa, Mary F.; Isaacs, Aaron; Dehghan, Abbas; d'Adamo, Pio; Adeyemo, Adebowale; Dieffenbach, Aida Karina; Zonderman, Alan B.; Nolte, Ilja M.; van der Most, Peter J.; Wright, Alan F.; Shuldiner, Alan R.; Morrison, Alanna C.; Hofman, Albert; Smith, Albert V.; Dreisbach, Albert W.; Franke, Andre; Uitterlinden, Andre G.; Metspalu, Andres; Tonjes, Anke; Lupo, Antonio; Robino, Antonietta; Johansson, Åsa; Demirkan, Ayse; Kollerits, Barbara; Freedman, Barry I.; Ponte, Belen; Oostra, Ben A.; Paulweber, Bernhard; Krämer, Bernhard K.; Mitchell, Braxton D.; Buckley, Brendan M.; Peralta, Carmen A.; Hayward, Caroline; Helmer, Catherine; Rotimi, Charles N.; Shaffer, Christian M.; Müller, Christian; Sala, Cinzia; van Duijn, Cornelia M.; Saint-Pierre, Aude; Ackermann, Daniel; Shriner, Daniel; Ruggiero, Daniela; Toniolo, Daniela; Lu, Yingchang; Cusi, Daniele; Czamara, Darina; Ellinghaus, David; Siscovick, David S.; Ruderfer, Douglas; Gieger, Christian; Grallert, Harald; Rochtchina, Elena; Atkinson, Elizabeth J.; Holliday, Elizabeth G.; Boerwinkle, Eric; Salvi, Erika; Bottinger, Erwin P.; Murgia, Federico; Rivadeneira, Fernando; Ernst, Florian; Kronenberg, Florian; Hu, Frank B.; Navis, Gerjan J.; Curhan, Gary C.; Ehret, George B.; Homuth, Georg; Coassin, Stefan; Thun, Gian-Andri; Pistis, Giorgio; Gambaro, Giovanni; Malerba, Giovanni; Montgomery, Grant W.; Eiriksdottir, Gudny; Jacobs, Gunnar; Li, Guo; Wichmann, H-Erich; Campbell, Harry; Schmidt, Helena; Wallaschofski, Henri; Völzke, Henry; Brenner, Hermann; Kroemer, Heyo K.; Kramer, Holly; Lin, Honghuang; Leach, I. Mateo; Ford, Ian; Guessous, Idris; Rudan, Igor; Prokopenko, Inga; Borecki, Ingrid; Heid, Iris M.; Kolcic, Ivana; Persico, Ivana; Jukema, J. Wouter; Wilson, James F.; Felix, Janine F.; Divers, Jasmin; Lambert, Jean-Charles; Stafford, Jeanette M.; Gaspoz, Jean-Michel; Smith, Jennifer A.; Faul, Jessica D.; Wang, Jie Jin; Ding, Jingzhong; Hirschhorn, Joel N.; Attia, John; Whitfield, John B.; Chalmers, John; Viikari, Jorma; Coresh, Josef; Denny, Joshua C.; Karjalainen, Juha; Fernandes, Jyotika K.; Endlich, Karlhans; Butterbach, Katja; Keene, Keith L.; Lohman, Kurt; Portas, Laura; Launer, Lenore J.; Lyytikäinen, Leo-Pekka; Yengo, Loic; Franke, Lude; Ferrucci, Luigi; Rose, Lynda M.; Kedenko, Lyudmyla; Rao, Madhumathi; Struchalin, Maksim; Kleber, Marcus E.; Cavalieri, Margherita; Haun, Margot; Cornelis, Marilyn C.; Ciullo, Marina; Pirastu, Mario; de Andrade, Mariza; McEvoy, Mark A.; Woodward, Mark; Adam, Martin; Cocca, Massimiliano; Nauck, Matthias; Imboden, Medea; Waldenberger, Melanie; Pruijm, Menno; Metzger, Marie; Stumvoll, Michael; Evans, Michele K.; Sale, Michele M.; Kähönen, Mika; Boban, Mladen; Bochud, Murielle; Rheinberger, Myriam; Verweij, Niek; Bouatia-Naji, Nabila; Martin, Nicholas G.; Hastie, Nick; Probst-Hensch, Nicole; Soranzo, Nicole; Devuyst, Olivier; Raitakari, Olli; Gottesman, Omri; Franco, Oscar H.; Polasek, Ozren; Gasparini, Paolo; Munroe, Patricia B.; Ridker, Paul M.; Mitchell, Paul; Muntner, Paul; Meisinger, Christa; Smit, Johannes H.; Abecasis, Goncalo R.; Adair, Linda S.; Alexander, Myriam; Altshuler, David; Amin, Najaf; Arking, Dan E.; Arora, Pankaj; Aulchenko, Yurii; Bakker, Stephan J. L.; Bandinelli, Stefania; Barroso, Ines; Beckmann, Jacques S.; Beilby, John P.; Bergman, Richard N.; Bergmann, Sven; Bis, Joshua C.; Boehnke, Michael; Bonnycastle, Lori L.; Bornstein, Stefan R.; Bots, Michiel L.; Bragg-Gresham, Jennifer L.; Brand, Stefan-Martin; Brand, Eva; Braund, Peter S.; Brown, Morris J.; Burton, Paul R.; Casas, Juan P.; Caulfield, Mark J.; Chakravarti, Aravinda; Chambers, John C.; Chandak, Giriraj R.; Chang, Yen-Pei C.; Charchar, Fadi J.; Chaturvedi, Nish; Shin Cho, Yoon; Clarke, Robert; Collins, Francis S.; Collins, Rory; Connell, John M.; Cooper, Jackie A.; Cooper, Matthew N.; Cooper, Richard S.; Corsi, Anna Maria; Dörr, Marcus; Dahgam, Santosh; Danesh, John; Smith, George Davey; Day, Ian N. M.; Deloukas, Panos; Denniff, Matthew; Dominiczak, Anna F.; Dong, Yanbin; Doumatey, Ayo; Elliott, Paul; Elosua, Roberto; Erdmann, Jeanette; Eyheramendy, Susana; Farrall, Martin; Fava, Cristiano; Forrester, Terrence; Fowkes, F. Gerald R.; Fox, Ervin R.; Frayling, Timothy M.; Galan, Pilar; Ganesh, Santhi K.; Garcia, Melissa; Gaunt, Tom R.; Glazer, Nicole L.; Go, Min Jin; Goel, Anuj; Grässler, Jürgen; Grobbee, Diederick E.; Groop, Leif; Guarrera, Simonetta; Guo, Xiuqing; Hadley, David; Hamsten, Anders; Han, Bok-Ghee; Hardy, Rebecca; Hartikainen, Anna-Liisa; Heath, Simon; Heckbert, Susan R.; Hedblad, Bo; Hercberg, Serge; Hernandez, Dena; Hicks, Andrew A.; Hilton, Gina; Hingorani, Aroon D.; Bolton, Judith A Hoffman; Hopewell, Jemma C.; Howard, Philip; Humphries, Steve E.; Hunt, Steven C.; Hveem, Kristian; Ikram, M. Arfan; Islam, Muhammad; Iwai, Naoharu; Jarvelin, Marjo-Riitta; Jackson, Anne U.; Jafar, Tazeen H.; Janipalli, Charles S.; Johnson, Toby; Kathiresan, Sekar; Khaw, Kay-Tee; Kim, Hyung-Lae; Kinra, Sanjay; Kita, Yoshikuni; Kivimaki, Mika; Kooner, Jaspal S.; Kumar, M. J. Kranthi; Kuh, Diana; Kulkarni, Smita R.; Kumari, Meena; Kuusisto, Johanna; Kuznetsova, Tatiana; Laakso, Markku; Laan, Maris; Laitinen, Jaana; Lakatta, Edward G.; Langefeld, Carl D.; Larson, Martin G.; Lathrop, Mark; Lawlor, Debbie A.; Lawrence, Robert W.; Lee, Jong-Young; Lee, Nanette R.; Levy, Daniel; Li, Yali; Longstreth, Will T.; Luan, Jian'an; Lucas, Gavin; Ludwig, Barbara; Mangino, Massimo; Mani, K. Radha; Marmot, Michael G.; Mattace-Raso, Francesco U. S.; Matullo, Giuseppe; McArdle, Wendy L.; McKenzie, Colin A.; Meitinger, Thomas; Melander, Olle; Meneton, Pierre; Meschia, James F.; Miki, Tetsuro; Milaneschi, Yuri; Mohlke, Karen L.; Mooser, Vincent; Morken, Mario A.; Morris, Richard W.; Mosley, Thomas H.; Najjar, Samer; Narisu, Narisu; Newton-Cheh, Christopher; Nguyen, Khanh-Dung Hoang; Nilsson, Peter; Nyberg, Fredrik; O'Donnell, Christopher J.; Ogihara, Toshio; Ohkubo, Takayoshi; Okamura, Tomonori; Ong, RickTwee-Hee; Ongen, Halit; Onland-Moret, N. Charlotte; O'Reilly, Paul F.; Org, Elin; Orru, Marco; Palmas, Walter; Palmen, Jutta; Palmer, Lyle J.; Palmer, Nicholette D.; Parker, Alex N.; Peden, John F.; Peltonen, Leena; Perola, Markus; Pihur, Vasyl; Platou, Carl G. P.; Plump, Andrew; Prabhakaran, Dorairajan; Psaty, Bruce M.; Raffel, Leslie J.; Rao, Dabeeru C.; Rasheed, Asif; Ricceri, Fulvio; Rice, Kenneth M.; Rosengren, Annika; Rotter, Jerome I.; Rudock, Megan E.; Sõber, Siim; Salako, Tunde; Saleheen, Danish; Salomaa, Veikko; Samani, Nilesh J.; Schwartz, Steven M.; Schwarz, Peter E. H.; Scott, Laura J.; Scott, James; Scuteri, Angelo; Sehmi, Joban S.; Seielstad, Mark; Seshadri, Sudha; Sharma, Pankaj; Shaw-Hawkins, Sue; Shi, Gang; Shrine, Nick R. G.; Sijbrands, Eric J. G.; Sim, Xueling; Singleton, Andrew; Sjögren, Marketa; Smith, Nicholas L.; Artigas, Maria Soler; Spector, Tim D.; Staessen, Jan A.; Stancakova, Alena; Steinle, Nanette I.; Strachan, David P.; Stringham, Heather M.; Sun, Yan V.; Swift, Amy J.; Tabara, Yasuharu; Tai, E-Shyong; Talmud, Philippa J.; Taylor, Andrew; Terzic, Janos; Thelle, Dag S.; Tobin, Martin D.; Tomaszewski, Maciej; Tripathy, Vikal; Tuomilehto, Jaakko; Tzoulaki, Ioanna; Uda, Manuela; Ueshima, Hirotsugu; Uiterwaal, Cuno S. P. M.; Umemura, Satoshi; van der Harst, Pim; van der Schouw, Yvonne T.; van Gilst, Wiek H.; Vartiainen, Erkki; Vasan, Ramachandran S.; Veldre, Gudrun; Verwoert, Germaine C.; Viigimaa, Margus; Vinay, D. G.; Vineis, Paolo; Voight, Benjamin F.; Vollenweider, Peter; Wagenknecht, Lynne E.; Wain, Louise V.; Wang, Xiaoling; Wang, Thomas J.; Wareham, Nicholas J.; Watkins, Hugh; Weder, Alan B.; Whincup, Peter H.; Wiggins, Kerri L.; Witteman, Jacqueline C. M.; Wong, Andrew; Wu, Ying; Yajnik, Chittaranjan S.; Yao, Jie; Young, J. H.; Zelenika, Diana; Zhai, Guangju; Zhang, Weihua; Zhang, Feng; Zhao, Jing Hua; Zhu, Haidong; Zhu, Xiaofeng; Zitting, Paavo; Zukowska-Szczechowska, Ewa; Okada, Yukinori; Wu, Jer-Yuarn; Gu, Dongfeng; Takeuchi, Fumihiko; Takahashi, Atsushi; Maeda, Shiro; Tsunoda, Tatsuhiko; Chen, Peng; Lim, Su-Chi; Wong, Tien-Yin; Liu, Jianjun; Young, Terri L.; Aung, Tin; Teo, Yik-Ying; Kim, Young Jin; Kang, Daehee; Chen, Chien-Hsiun; Tsai, Fuu-Jen; Chang, Li-Ching; Fann, S. -J. Cathy; Mei, Hao; Hixson, James E.; Chen, Shufeng; Katsuya, Tomohiro; Isono, Masato; Albrecht, Eva; Yamamoto, Kazuhiko; Kubo, Michiaki; Nakamura, Yusuke; Kamatani, Naoyuki; Kato, Norihiro; He, Jiang; Chen, Yuan-Tsong; Tanaka, Toshihiro; Reilly, Muredach P; Schunkert, Heribert; Assimes, Themistocles L.; Hall, Alistair; Hengstenberg, Christian; König, Inke R.; Laaksonen, Reijo; McPherson, Ruth; Thompson, John R.; Thorsteinsdottir, Unnur; Ziegler, Andreas; Absher, Devin; Chen, Li; Cupples13, L. Adrienne; Halperin, Eran; Li, Mingyao; Musunuru, Kiran; Preuss, Michael; Schillert, Arne; Thorleifsson, Gudmar; Wells, George A.; Holm, Hilma; Roberts, Robert; Stewart, Alexandre F. R.; Fortmann, Stephen; Go, Alan; Hlatky, Mark; Iribarren, Carlos; Knowles, Joshua; Myers, Richard; Quertermous, Thomas; Sidney, Steven; Risch, Neil; Tang, Hua; Blankenberg, Stefan; Schnabel, Renate; Sinning, Christoph; Lackner, Karl J.; Tiret, Laurence; Nicaud, Viviane; Cambien, Francois; Bickel, Christoph; Rupprecht, Hans J.; Perret, Claire; Proust, Carole; Münzel, Thomas F.; Barbalic, Maja; Chen, Ida Yii-Der; Demissie-Banjaw, Serkalem; Folsom, Aaron; Lumley, Thomas; Marciante, Kristin; Taylor, Kent D.; Volcik, Kelly; Gretarsdottir, Solveig; Gulcher, Jeffrey R.; Kong, Augustine; Stefansson, Kari; Thorgeirsson, Gudmundur; Andersen, Karl; Fischer, Marcus; Grosshennig, Anika; Linsel-Nitschke, Patrick; Stark, Klaus; Schreiber, Stefan; Aherrahrou, Zouhair; Bruse, Petra; Doering, Angela; Klopp, Norman; Diemert, Patrick; Loley, Christina; Medack, Anja; Nahrstedt, Janja; Peters, Annette; Wagner, Arnika K.; Willenborg, Christina; Böhm, Bernhard O.; Dobnig, Harald; Grammer, Tanja B.; Hoffmann, Michael M.; Meinitzer, Andreas; Winkelmann, Bernhard R.; Pilz, Stefan; Renner, Wilfried; Scharnagl, Hubert; Stojakovic, Tatjana; Tomaschitz, Andreas; Winkler, Karl; Guiducci, Candace; Burtt, Noel; Gabriel, Stacey B.; Dandona, Sonny; Jarinova, Olga; Qu, Liming; Wilensky, Robert; Matthai, William; Hakonarson, Hakon H.; Devaney, Joe; Burnett, Mary Susan; Pichard, Augusto D.; Kent, Kenneth M.; Satler, Lowell; Lindsay, Joseph M.; Waksman, Ron; Knouff, Christopher W.; Waterworth, Dawn M.; Walker, Max C.; Epstein, Stephen E.; Rader, Daniel J.; Nelson, Christopher P.; Wright, Benjamin J.; Balmforth, Anthony J.; Ball, Stephen G.; Loehr, Laura R.; Rosamond, Wayne D.; Benjamin, Emelia; Haritunians, Talin; Couper, David; Murabito, Joanne; Wang, Ying A.; Stricker, Bruno H.; Chang, Patricia P.; Willerson, James T.; Felix, Stephan B.; Watzinger, Norbert; Aragam, Jayashri; Zweiker, Robert; Lind, Lars; Rodeheffer, Richard J.; Greiser, Karin Halina; Deckers, Jaap W.; Stritzke, Jan; Ingelsson, Erik; Kullo, Iftikhar; Haerting, Johannes; Reffelmann, Thorsten; Redfield, Margaret M.; Werdan, Karl; Mitchell, Gary F.; Arnett, Donna K.; Gottdiener, John S.; Blettner, Maria; Friedrich, Nele; Kovacs, Peter; Wild, Philipp S.; Froguel, Philippe; Rettig, Rainer; Mägi, Reedik; Biffar, Reiner; Schmidt, Reinhold; Middelberg, Rita P. S.; Carroll, Robert J.; Penninx, Brenda W.; Scott, Rodney J.; Katz, Ronit; Sedaghat, Sanaz; Wild, Sarah H.; Kardia, Sharon L. R.; Ulivi, Sheila; Hwang, Shih-Jen; Enroth, Stefan; Kloiber, Stefan; Trompet, Stella; Stengel, Benedicte; Hancock, Stephen J.; Turner, Stephen T.; Rosas, Sylvia E.; Stracke, Sylvia; Harris, Tamara B.; Zeller, Tanja; Zemunik, Tatijana; Lehtimäki, Terho; Illig, Thomas; Aspelund, Thor; Nikopensius, Tiit; Esko, Tonu; Tanaka, Toshiko; Gyllensten, Ulf; Völker, Uwe; Emilsson, Valur; Vitart, Veronique; Aalto, Ville; Gudnason, Vilmundur; Chouraki, Vincent; Chen, Wei-Min; Igl, Wilmar; März, Winfried; Koenig, Wolfgang; Lieb, Wolfgang; Loos, Ruth J. F.; Liu, Yongmei; Snieder, Harold; Pramstaller, Peter P.; Parsa, Afshin; O'Connell, Jeffrey R.; Susztak, Katalin; Hamet, Pavel; Tremblay, Johanne; de Boer, Ian H.; Böger, Carsten A.; Goessling, Wolfram; Chasman, Daniel I.; Köttgen, Anna; Kao, W. H. Linda; Fox, Caroline S.

    2016-01-01

    Reduced glomerular filtration rate defines chronic kidney disease and is associated with cardiovascular and all-cause mortality. We conducted a meta-analysis of genome-wide association studies for estimated glomerular filtration rate (eGFR), combining data across 133,413 individuals with replication in up to 42,166 individuals. We identify 24 new and confirm 29 previously identified loci. Of these 53 loci, 19 associate with eGFR among individuals with diabetes. Using bioinformatics, we show that identified genes at eGFR loci are enriched for expression in kidney tissues and in pathways relevant for kidney development and transmembrane transporter activity, kidney structure, and regulation of glucose metabolism. Chromatin state mapping and DNase I hypersensitivity analyses across adult tissues demonstrate preferential mapping of associated variants to regulatory regions in kidney but not extra-renal tissues. These findings suggest that genetic determinants of eGFR are mediated largely through direct effects within the kidney and highlight important cell types and biological pathways. PMID:26831199

  19. Discrimination between biologically relevant calcium phosphate phases by surface-analytical techniques

    Energy Technology Data Exchange (ETDEWEB)

    Kleine-Boymann, Matthias, E-mail: matthias.kleine-boymann@phys.chemie.uni-giessen.de; Rohnke, Marcus, E-mail: marcus.rohnke@phys.chemie.uni-giessen.de; Henss, Anja, E-mail: anja.henss@phys.chemie.uni-giessen.de; Peppler, Klaus, E-mail: klaus.peppler@phys.chemie.uni-giessen.de; Sann, Joachim, E-mail: joachim.sann@phys.chemie.uni-giessen.de; Janek, Juergen, E-mail: juergen.janek@phys.chemie.uni-giessen.de

    2014-08-01

    The spatially resolved phase identification of biologically relevant calcium phosphate phases (CPPs) in bone tissue is essential for the elucidation of bone remodeling mechanisms and for the diagnosis of bone diseases. Analytical methods with high spatial resolution for the discrimination between chemically quite close phases are rare. Therefore the applicability of state-of-the-art ToF-SIMS, XPS and EDX as chemically specific techniques was investigated. The eight CPPs hydroxyapatite (HAP), β-tricalcium phosphate (β-TCP), α-tricalcium phosphate (α-TCP), octacalcium phosphate (OCP), dicalcium phosphate dihydrate (DCPD), dicalcium phosphate (DCP), monocalcium phosphate (MCP) and amorphous calcium phosphate (ACP) were either commercial materials in high purity or synthesized by ourselves. The phase purity was proven by XRD analysis. All of the eight CPPs show different mass spectra and the phases can be discriminated by applying the principal component analysis method to the mass spectrometric data. The Ca/P ratios of all phosphates were determined by XPS and EDX. With both methods some CPPs can be distinguished, but the obtained Ca/P ratios deviate systematically from their theoretical values. It is necessary in any case to determine a calibration curve, respectively the ZAF values, from appropriate standards. In XPS also the O(1s)-satellite signals are correlated to the CPPs composition. Angle resolved and long-term XPS measurements of HAP clearly prove that there is no phosphate excess at the surface. Decomposition due to X-ray irradiation has not been observed.

  20. CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources

    OpenAIRE

    Bleda, Marta; Tarraga, Joaquín; de María, Alejandro; Salavert, Francisco; García-Alonso, Luz; Celma Giménez, Matilde; Martín Mayordomo, Ainoha; Dopazo, Joaquín; Medina, Ignacio

    2012-01-01

    During the past years, the advances in high-throughput technologies have produced an unprecedented growth in the number and size of repositories and databases storing relevant biological data. Today, there is more biological information than ever but, unfortunately, the current status of many of these repositories is far from being optimal. Some of the most common problems are that the information is spread out in many small databases; frequently there are different standards among repositori...

  1. Study about the relevance and the disclosure of biological assets of listed companies in BM&FBOVESPA

    Directory of Open Access Journals (Sweden)

    Luciana Holtz

    2013-08-01

    Full Text Available The main objective this article is to verify that the information content of biological assets disclosed in the financial statements are relevant and, the secondary objective perform content analysis of the notes verifying the compliance of information supplied by entities with CPC 29. The study sample was composed of publicly traded stock companies listed on the BM & FBOVESPA with data for the year 2010 and 2011. The empirical tests were conducted applying relevance models, using observations of 347 active companies characterizing a study model pooled ordinary least squares – POLS, including companies that have reported biological assets into account specific .The companies that had values of biological assets posted have had analyzed explanatory notes referring to this account. The results provide empirical evidence that the information content of biological assets disclosed by companies is not relevant to the sample. In relation the content analysis of the notes was checked a partial compliance of the standard, there is a disparity in the information disclosure practices by the companies analyzed, as well as an omission of items required by the standard. Can be inferred that loss of the relevance has occurred, in part, by the poor quality of the notes, which may make it difficult for outside users in interpreting the information disclosed.

  2. Synthesis, Biological Activities of Mono-substituted Pyrimidine-pyridine Sulfonylurea Compounds%单取代嘧啶基吡啶磺酰脲化合物的合成和生物活性

    Institute of Scientific and Technical Information of China (English)

    童军; 郑占英; 李永红; 王素华; 李正名

    2012-01-01

    [方法]以单取代苯磺酰脲除草剂为基础,在分子中以吡啶环代替苯环设计合成了15个新的吡啶磺酰脲化合物,所有合成的化合物经核磁、元素分析确证,并对其生物活性进行了研究.[结论]剂量为300 g a.i./hm2时,大部分化合物对被测4种杂草的抑制活性不明显.%[Methods] Based on the structure of mono-substituted pyrimidine sulfonylurea herbicides developed 15 novel pyridinyl sulfonylurea molecules containing mono-substituted pyrimidine rings were designed and synthesized. The structures of all compounds were confirmed by 1H NMR and elemental analysis. The bioassay was also carried out, [Conclusions] The biological screening results showed that the inhibitory effects of most of synthesized compounds were not obvious at the concentration of 300 g a.i./ha.

  3. "Evo in the News:" Understanding Evolution and Students' Attitudes toward the Relevance of Evolutionary Biology

    Science.gov (United States)

    Infanti, Lynn M.; Wiles, Jason R.

    2014-01-01

    This investigation evaluated the effects of exposure to the "Evo in the News" section of the "Understanding Evolution" website on students' attitudes toward biological evolution in undergraduates in a mixed-majors introductory biology course at Syracuse University. Students' attitudes toward evolution and changes therein were…

  4. CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources

    Science.gov (United States)

    Bleda, Marta; Tarraga, Joaquin; de Maria, Alejandro; Salavert, Francisco; Garcia-Alonso, Luz; Celma, Matilde; Martin, Ainoha; Dopazo, Joaquin; Medina, Ignacio

    2012-01-01

    During the past years, the advances in high-throughput technologies have produced an unprecedented growth in the number and size of repositories and databases storing relevant biological data. Today, there is more biological information than ever but, unfortunately, the current status of many of these repositories is far from being optimal. Some of the most common problems are that the information is spread out in many small databases; frequently there are different standards among repositories and some databases are no longer supported or they contain too specific and unconnected information. In addition, data size is increasingly becoming an obstacle when accessing or storing biological data. All these issues make very difficult to extract and integrate information from different sources, to analyze experiments or to access and query this information in a programmatic way. CellBase provides a solution to the growing necessity of integration by easing the access to biological data. CellBase implements a set of RESTful web services that query a centralized database containing the most relevant biological data sources. The database is hosted in our servers and is regularly updated. CellBase documentation can be found at http://docs.bioinfo.cipf.es/projects/cellbase. PMID:22693220

  5. The Fortymile caribou herd: novel proposed management and relevant biology, 1992-1997

    Directory of Open Access Journals (Sweden)

    Rodney D. Boertje

    2000-04-01

    Full Text Available A diverse, international Fortymile Planning Team wrote a novel Fortymile caribou herd {Rangifer tarandus granti Management Plan in 1995 (Boertje & Gardner, 1996: 56-77. The primary goal of this plan is to begin restoring the Fortymile herd to its former range; >70% of the herd's former range was abandoned as herd size declined. Specific objectives call for increasing the Fortymile herd by at least 5-10% annually from 1998-2002. We describe demographics of the herd, factors limiting the herd, and condition of the herd and range during 1992-1997. These data were useful in proposing management actions for the herd and should be instrumental in future evaluations of the plan's actions. The following points summarize herd biology relevant to management proposed by the Fortymile Planning Team: 1. Herd numbers remained relatively stable during 1990-1995 (about 22 000-23 000 caribou. On 21 June 1996 we counted about 900 additional caribou in the herd, probably a result of increased pregnancy rates in 1996. On 26 June 1997 we counted about 2500 additional caribou in the herd, probably a result of recruitment of the abundant 1996 calves and excellent early survival of the 1997 calves. The Team deemed that implementing management actions during a period of natural growth would be opportune. 2. Wolf (Canis lupus and grizzly bear (Ursus arctos predation were the most important sources of mortality, despite over a decade of the most liberal regulations in the state for harvesting of wolves and grizzly bears. Wolves were the most important predator. Wolves killed between 2000 and 3000 caribou calves annually during this study and between 1000 and 2300 older caribou; 1200-1900 calves were killed from May through September. No significant differences in annual wolf predation rates on calves or adults were observed between 1994 and early winter 1997. Reducing wolf predation was judged by the Team to be the most manageable way to help hasten or stimulate

  6. Carboxylate-Assisted Iridium-Catalyzed C-H Amination of Arenes with Biologically Relevant Alkyl Azides.

    Science.gov (United States)

    Zhang, Tao; Hu, Xuejiao; Wang, Zhen; Yang, Tiantian; Sun, Hao; Li, Guigen; Lu, Hongjian

    2016-02-24

    An iridium-catalyzed C-H amination of arenes with a wide substrate scope is reported. Benzamides with electron-donating and -withdrawing groups and linear, branched, and cyclic alkyl azides are all applicable. Cesium carboxylate is crucial for both reactivity and regioselectivity of the reactions. Many biologically relevant molecules, such as amino acid, peptide, steroid, sugar, and thymidine derivatives can be introduced to arenes with high yields and 100 % chiral retention. PMID:26712274

  7. An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance

    OpenAIRE

    Vinga Susana; Casimiro Ana C; Freitas Ana T; Oliveira Arlindo L

    2008-01-01

    Abstract Background Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior classification of the output still suffers from some limitations, which makes it difficult to assess the biological significance of the motifs found. Previous work has highlighted the existence of positional bias of motifs in the DNA sequences, which might indicate not only that the pattern is important, but als...

  8. The relevance and potential roles of microphysiological systems in biology and medicine

    OpenAIRE

    Wikswo, John P.

    2014-01-01

    Microphysiological systems (MPS), consisting of interacting organs-on-chips or tissue-engineered, 3D organ constructs that use human cells, present an opportunity to bring new tools to biology, medicine, pharmacology, physiology, and toxicology. This issue of Experimental Biology and Medicine describes the ongoing development of MPS that can serve as in vitro models for bone and cartilage, brain, gastrointestinal tract, lung, liver, microvasculature, reproductive tract, skeletal muscle, and s...

  9. Gene Network Biological Validity Based on Gene-Gene Interaction Relevance

    OpenAIRE

    Francisco Gómez-Vela; Norberto Díaz-Díaz

    2014-01-01

    In recent years, gene networks have become one of the most useful tools for modeling biological processes. Many inference gene network algorithms have been developed as techniques for extracting knowledge from gene expression data. Ensuring the reliability of the inferred gene relationships is a crucial task in any study in order to prove that the algorithms used are precise. Usually, this validation process can be carried out using prior biological knowledge. The metabolic pathways stored in...

  10. Biological effects of environmentally relevant concentrations of the pharmaceutical Triclosan in the marine mussel Perna perna (Linnaeus, 1758)

    International Nuclear Information System (INIS)

    Triclosan (5-Chloro-2-(2,4-dichlorophenoxy) phenol) is an antibacterial compound widely employed in pharmaceuticals and personal care products. Although this emerging compound has been detected in aquatic environments, scarce information is found on the effects of Triclosan to marine organisms. The aim of this study was to evaluate the toxicity of a concentration range of Triclosan through fertilization assay (reproductive success), embryo-larval development assay (early life stage) and physiological stress (Neutral Red Retention Time assay - NRRT) (adult stage) in the marine sentinel organism Perna perna. The mean inhibition concentrations for fertilization (IC50 = 0.490 mg L−1) and embryo-larval development (IC50 = 0.135 mg L−1) tests were above environmental relevant concentrations (ng L−1) given by previous studies. Differently, significant reduction on NRRT results was found at 12 ng L−1, demonstrating the current risk of the continuous introduction of Triclosan into aquatic environments, and the need of ecotoxicological studies oriented by the mechanism of action of the compound. - Highlights: ► Triclosan causes biological adverse effects at environmental relevant concentrations. ► Mechanisms of action oriented assays were more sensitive to detect biological damages. ► Currently there is environmental risks concerned Triclosan in aquatic ecosystems. - Triclosan causes biological adverse effects at environmentally relevant concentrations.

  11. Teleology then and now: the question of Kant's relevance for contemporary controversies over function in biology.

    Science.gov (United States)

    Zammito, John

    2006-12-01

    'Naturalism' is the aspiration of contemporary philosophy of biology, and Kant simply cannot be refashioned into a naturalist. Instead, epistemological 'deflation' was the decisive feature of Kant's treatment of the 'biomedical' science in his day, so it is not surprising that this might attract some philosophers of science to him today. A certain sense of impasse in the contemporary 'function talk' seems to motivate renewed interest in Kant. Kant--drawing on his eighteenth-century predecessors-provided a discerning and powerful characterization of what biologists had to explain in organic form. His difference from the rest is that he opined that it was impossible to explain it. Its 'inscrutability' was intrinsic. The third Critique essentially proposed the reduction of biology to a kind of pre-scientific descriptivism, doomed never to attain authentic scientificity, to have its 'Newton of the blade of grass'. By contrast, for Locke, and a fortiori for Buffon and his followers, 'intrinsic purposiveness' was a fact of the matter about concrete biological phenomena; the features of internal self-regulation were hypotheses arising out of actual research practice. The difference comes most vividly to light once we recognize Kant's distinction of the concept of organism from the concept of life. If biology must conceptualize self-organization as actual in the world, Kant's regulative/constitutive distinction is pointless in practice and the (naturalist) philosophy of biology has urgent work to undertake for which Kant turns out not to be very helpful. PMID:17157770

  12. Genomics and systems biology - How relevant are the developments to veterinary pharmacology, toxicology and therapeutics?

    NARCIS (Netherlands)

    Witkamp, R.F.

    2005-01-01

    This review discusses some of the recent developments in genomics and its current and future relevance for veterinary pharmacology and toxicology. With the rapid progress made in this field several new approaches in pharmacological and toxicological research have developed and drug discovery and dru

  13. Determination of the Biologically Relevant Sampling Depth for Terrestrial and Aquatic Ecological Risk Assessments (Final Report)

    Science.gov (United States)

    This technical paper provides defensible approximations for what the depth of the biologically active zone, or “biotic zone” is within certain environments. The methods used in this study differ somewhat between Part 1 (Terrestrial Biotic Zone) and Part 2 (Aquatic Biotic Zone). ...

  14. Altitude training causes haematological fluctuations with relevance for the Athlete Biological Passport

    DEFF Research Database (Denmark)

    Bonne, Thomas Christian; Lundby, Carsten; Lundby, Anne Kristine;

    2015-01-01

    The impact of altitude training on haematological parameters and the Athlete Biological Passport (ABP) was evaluated in international-level elite athletes. One group of swimmers lived high and trained high (LHTH, n = 10) for three to four weeks at 2130 m or higher whereas a control group (n = 10)...

  15. Is 'class effect' relevant when assessing the benefit/risk profile of a biologic agent?

    NARCIS (Netherlands)

    Sterry, W.; Kerkhof, P.C.M. van de

    2012-01-01

    Psoriasis is a chronic, genetically predisposed skin disorder, characterised by thickened scaly plaques. Although no therapy is recognised as curative, therapies aimed at symptom control include biologic agents that are generally designed to block molecular activation of cellular pathways of a patho

  16. Prediction of clinical outcome in glioblastoma using a biologically relevant nine-microRNA signature

    OpenAIRE

    Hayes, J.; Thygesen, H., Helene; Tumilson, C; Droop, A; Boissinot, M; Hughes, TA; Westhead, D; Alder, JE; Shaw, L; Short, SC; Lawler, SE

    2015-01-01

    Background: Glioblastoma is the most aggressive primary brain tumor, and is associated with a very poor prognosis. In this study we investigated the potential of microRNA expression profiles to predict survival in this challenging disease. Methods: MicroRNA and mRNA expression data from glioblastoma (n=475) and grade II and III glioma (n=178) were accessed from The Cancer Genome Atlas. LASSO regression models were used to identify a prognostic microRNA signature. Functionally relevant targets...

  17. multiClust: An R-package for Identifying Biologically Relevant Clusters in Cancer Transcriptome Profiles

    Science.gov (United States)

    Lawlor, Nathan; Fabbri, Alec; Guan, Peiyong; George, Joshy; Karuturi, R. Krishna Murthy

    2016-01-01

    Clustering is carried out to identify patterns in transcriptomics profiles to determine clinically relevant subgroups of patients. Feature (gene) selection is a critical and an integral part of the process. Currently, there are many feature selection and clustering methods to identify the relevant genes and perform clustering of samples. However, choosing an appropriate methodology is difficult. In addition, extensive feature selection methods have not been supported by the available packages. Hence, we developed an integrative R-package called multiClust that allows researchers to experiment with the choice of combination of methods for gene selection and clustering with ease. Using multiClust, we identified the best performing clustering methodology in the context of clinical outcome. Our observations demonstrate that simple methods such as variance-based ranking perform well on the majority of data sets, provided that the appropriate number of genes is selected. However, different gene ranking and selection methods remain relevant as no methodology works for all studies. PMID:27330269

  18. Relevance of Crop Biology for Environmental Risk Assessment of Genetically Modified Crops in Africa

    OpenAIRE

    Akinbo, Olalekan; Hancock, James F.; Makinde, Diran

    2015-01-01

    Knowledge about the crop biology of economic crops in Africa is needed for regulators to accurately review dossiers and conduct comprehensive environmental risk assessments (ERAs). This information allows regulators to decide whether biotech crops present a risk to biodiversity, since crossing between domesticated crops and their wild relatives could affect the adaptations of the wild species. The criteria that should be used in the evaluation of African crops for ERA include growth habit, ce...

  19. Physical interactions among plant MADS-box transcription factors and their biological relevance

    OpenAIRE

    Nougalli Tonaco, I.A.

    2008-01-01

    The biological interpretation of the genome starts from transcription, and many different signaling pathways are integrated at this level. Transcription factors play a central role in the transcription process, because they select the down-stream genes and determine their spatial and temporal expression. In higher eudicot species around 2000 specific transcription factors are present, which can be classified into families based on conserved common domains. The MADS-box transcription factor fa...

  20. The biology and clinical relevance of somatostatin receptor scintigraphy in adrenal tumor management.

    OpenAIRE

    Kennedy, J.W.; Dluhy, R G

    1997-01-01

    Somatostatin receptors are present in the normal adrenal cortex and medulla. These receptors are also expressed by tumors that cause Cushing's syndrome and by pheochromocytomas. Somatostatin analogues such as octreotide have been developed to target somatostatin receptors for diagnostic and therapeutic purposes. This article reviews the current knowledge of the biology of somatostatin receptors in the normal adrenal gland and in adrenal tumors and defines the current role of the somatostatin ...

  1. Biologically relevant 3D tumor arrays: treatment response and the importance of stromal partners

    Science.gov (United States)

    Rizvi, Imran; Celli, Jonathan P.; Xu, Feng; Evans, Conor L.; Abu-Yousif, Adnan O.; Muzikansky, Alona; Elrington, Stefan A.; Pogue, Brian W.; Finkelstein, Dianne M.; Demirci, Utkan; Hasan, Tayyaba

    2011-02-01

    The development and translational potential of therapeutic strategies for cancer is limited, in part, by a lack of biological models that capture important aspects of tumor growth and treatment response. It is also becoming increasingly evident that no single treatment will be curative for this complex disease. Rationally-designed combination regimens that impact multiple targets provide the best hope of significantly improving clinical outcomes for cancer patients. Rapidly identifying treatments that cooperatively enhance treatment efficacy from the vast library of candidate interventions is not feasible, however, with current systems. There is a vital, unmet need to create cell-based research platforms that more accurately mimic the complex biology of human tumors than monolayer cultures, while providing the ability to screen therapeutic combinations more rapidly than animal models. We have developed a highly reproducible in vitro three-dimensional (3D) tumor model for micrometastatic ovarian cancer (OvCa), which in conjunction with quantitative image analysis routines to batch-process large datasets, serves as a high throughput reporter to screen rationally-designed combination regimens. We use this system to assess mechanism-based combination regimens with photodynamic therapy (PDT), which sensitizes OvCa to chemo and biologic agents, and has shown promise in clinic trials. We show that PDT synergistically enhances carboplatin efficacy in a sequence dependent manner. In printed heterocellular cultures we demonstrate that proximity of fibroblasts enhances 3D tumor growth and investigate co-cultures with endothelial cells. The principles described here could inform the design and evaluation of mechanism-based therapeutic options for a broad spectrum of metastatic solid tumors.

  2. Solid State Structures of Alkali Metal Ion Complexes Formed by Low-Molecular-Weight Ligands of Biological Relevance.

    Science.gov (United States)

    Aoki, Katsuyuki; Murayama, Kazutaka; Hu, Ning-Hai

    2016-01-01

    This chapter provides structural data, mainly metal binding sites/modes, observed in crystal structures of alkali metal ion complexes containing low-molecular-weight ligands of biological relevance, mostly obtained from the Cambridge Structural Database (the CSD version 5.35 updated to February 2014). These ligands include (i) amino acids and small peptides, (ii) nucleic acid constituents (excluding quadruplexes and other oligonucleotides), (iii) simple carbohydrates, and (iv) naturally occurring antibiotic ionophores. For some representative complexes of these ligands, some details on the environment of the metal coordination and structural characteristics are described. PMID:26860299

  3. Elements determination of clinical relevance in biological tissues Dmdmdx/J dystrophic mice strains investigated by NAA

    International Nuclear Information System (INIS)

    In this work the determination of chemistry elements in biological tissues (whole blood, bones and organs) of dystrophic mice, used as animal model of Duchenne Muscular Dystrophy (DMD), was performed using analytical nuclear technique. The aim of this work was to determine reference values of elements of clinical (Ca, Cl, K, Mg, Na) and nutritional (Br and S) relevance in whole blood, tibia, quadriceps and hearts from Dmdmdx/J (10 males and 10 females) dystrophic mice and C57BL/6J (10 males) control group mice, using Neutron Activation Analysis technique (NAA). To show in more details the alterations that this disease may cause in these biological tissues, correlations matrixes of the DMDmdx/J mouse strain were generated and compared with C57BL/6J control group. For this study 119 samples of biological tissue were irradiated in the IEA-R1 nuclear reactor at IPEN (Sao Paulo, Brazil). The concentrations of these elements in biological tissues of Dmdmdx/J and C57B/6J mice are the first indicative interval for reference values. Moreover, the alteration in some correlation coefficients data among the elements in the health status and in the diseased status indicates a connection between these elements in whole blood, tibia, quadriceps and heart. These results may help the researchers to evaluate the efficiency of new treatments and to compare the advantages of different treatment approaches before performing tests in patients with muscular dystrophy. (author)

  4. Recent advances in superhydrophobic surfaces and their relevance to biology and medicine.

    Science.gov (United States)

    Ciasca, G; Papi, M; Businaro, L; Campi, G; Ortolani, M; Palmieri, V; Cedola, A; De Ninno, A; Gerardino, A; Maulucci, G; De Spirito, M

    2016-02-01

    By mimicking naturally occurring superhydrophobic surfaces, scientists can now realize artificial surfaces on which droplets of a few microliters of water are forced to assume an almost spherical shape and an extremely high contact angle. In recent decades, these surfaces have attracted much attention due to their technological applications for anti-wetting and self-cleaning materials. Very recently, researchers have shifted their interest to investigate whether superhydrophobic surfaces can be exploited to study biological systems. This research effort has stimulated the design and realization of new devices that allow us to actively organize, visualize and manipulate matter at both the microscale and nanoscale levels. Such precise control opens up wide applications in biomedicine, as it allows us to directly manipulate objects at the typical length scale of cells and macromolecules. This progress report focuses on recent biological and medical applications of superhydrophobicity. Particular regard is paid to those applications that involve the detection, manipulation and study of extremely small quantities of molecules, and to those that allow high throughput cell and biomaterial screening. PMID:26844980

  5. BIOLOGICAL THERAPY AND INFECTIONS IN PATIENTS WITH RHEUMATOID ARTHRITIS: RELEVANCE AND PROSPECTS

    Directory of Open Access Journals (Sweden)

    B. S. Belov

    2014-01-01

    Full Text Available The past decades are marked by the obvious progress in rheumatology, which is related to the practical introduction of biological agents. At the same time the use of these drugs is associated with the increasing risk of infections of different nature and locations, including opportunistic ones (invasive mycoses, Pneumocystis pneumonia, etc., and with the greater risk of reactivation of latent infection, primary with that of tuberculosis. Beyond that point, there are cases of severe infections (pneumonia, sepsis, bacterial arthritis, skin and soft tissue lesions, etc., including those with a fatal outcome. This review analyzes mainly the past 3-year literature data on the rate and location of infections treated with biologics, which have been obtained in the placebo-controlled and direct comparative studies of patients with rheuma- toid arthritis. It characterizes the importance of different infections (tuberculosis, pneumonia, chronic viral hepati- tides, herpesvirus infections, etc. for treatment policy in the above patients. This underlines the need for wider immu- nization with different vaccines (chiefly against pneumococcus and influenza in patients with autoimmune inflam- matory rheumatic diseases. 

  6. Collisions between low-energy electrons and small polyatomic targets of biological relevance

    Science.gov (United States)

    Hargreaves, Leigh

    2016-05-01

    Over the last decade, cross section measurements and calculations for DNA prototype molecules have received significant attention from the collisions community, due to the potential applications of this data in modelling electron transport through biological matter with a view to improving radiation dosimetry. Such data are additionally interesting from a fundamental aspect, as small carbon-based molecules are ideal targets for considering effects including target conformation, long-range dynamical interactions and coupling effects between the various degrees of freedom on the scattering properties of the target. At the California State University Fullerton, we have made a series of measurements of the elastic, vibrationally inelastic and electronically inelastic cross sections for a variety of small polyatomic targets, including water and the basic alcohols, ethylene, toluene and several fluorinated alkanes. These processes are important in a range of applications, primarily for modelling electron transport and thermalization, and energy deposition to a biological media. The data were obtained using a high resolution electron energy-loss spectrometer, operating in a crossed beam configuration with a moveable aperture gas source. The gas source design facilitates both an expedient and highly accurate method of removing background signal, and removes uncertainties from the data due to uncertainties in the beam profile. We have also performed scattering calculations employing the Schwinger Multichannel method, in collaboration with the California institute of technology, to compare with our measurements. In this talk, I will present an overview of our recent data and future research plans.

  7. The relevance of nanoscale biological fragments for ice nucleation in clouds

    Science.gov (United States)

    O‧Sullivan, D.; Murray, B. J.; Ross, J. F.; Whale, T. F.; Price, H. C.; Atkinson, J. D.; Umo, N. S.; Webb, M. E.

    2015-01-01

    Most studies of the role of biological entities as atmospheric ice-nucleating particles have focused on relatively rare supermicron particles such as bacterial cells, fungal spores and pollen grains. However, it is not clear that there are sufficient numbers of these particles in the atmosphere to strongly influence clouds. Here we show that the ice-nucleating activity of a fungus from the ubiquitous genus Fusarium is related to the presence of nanometre-scale particles which are far more numerous, and therefore potentially far more important for cloud glaciation than whole intact spores or hyphae. In addition, we quantify the ice-nucleating activity of nano-ice nucleating particles (nano-INPs) washed off pollen and also show that nano-INPs are present in a soil sample. Based on these results, we suggest that there is a reservoir of biological nano-INPs present in the environment which may, for example, become aerosolised in association with fertile soil dust particles.

  8. Solid state structures of cadmium complexes with relevance for biological systems.

    Science.gov (United States)

    Carballo, Rosa; Castiñeiras, Alfonso; Domínguez-Martín, Alicia; García-Santos, Isabel; Niclós-Gutiérrez, Juan

    2013-01-01

    This chapter provides a review of the literature on structural information from crystal structures determined by X-ray diffractometry of cadmium(II) complexes containing ligands of potential biological interest. These ligands fall into three broad classes, (i) those containing N-donors such as purine or pyrimidine bases and derivatives of adenine, guanine or cytosine, (ii) those containing carboxylate groups such as α-amino acids, in particular the twenty essential ones, the water soluble vitamins (B-complex) or the polycarboxylates of EDTA type ligands, and (iii) S-donors such as thiols/thiolates or dithiocarbamates. A crystal and molecular structural analysis has been carried out for some representative complexes of these ligands, specifically addressing the coordination mode of ligands, the coordination environment of cadmium and, in some significant cases, the intermolecular interactions. PMID:23430774

  9. Biological effects of pramipexole on dopaminergic neuron-associated genes: relevance to neuroprotection.

    Science.gov (United States)

    Pan, Tianhong; Xie, Wenjie; Jankovic, Joseph; Le, Weidong

    2005-03-29

    Pramipexole (PRX) is a non-ergot dopamine (DA) D2/D3 receptor agonist. Experimental studies have provided evidence that PRX may exert neuroprotective effects on the nigro-striatal system. Recent studies have demonstrated a slower decline of DAT density in Parkinson's disease patients treated with PRX as measured by SPECT. The aim of this study is to determine whether PRX has direct biological effects on DAergic neuron-associated genes expression, including DAT, VMAT2, and Nurr1. The human neuroblastoma SH-SY5Y cells were treated with PRX for various time periods and harvested to measure the mRNA and protein products of these genes. Treatment with PRX at 10 microM significantly increased DAT mRNA levels by 54-130% in 4-8 h, VMAT2 mRNA levels by 34% in 4 h, and Nurr1 mRNA levels by 31-39% in 2-4 h, which was the earliest induction among these three genes. The protein levels of DAT, VMAT2, and Nurr1 were markedly increased after PRX treatment, among which the increase of Nurr1 protein level was the highest at first 2 h treatment of PRX. Nafadotride, a D3 DA receptor antagonist, blocked the increase of Nurr1 gene expression induced by PRX, while eticlopride, a D2 DA receptor antagonist, didn't show this effect. Our findings that PRX has biological regulatory effects on DAergic neuron-associated genes may explain both the slower decline of imaged DAT and the neuroprotective effect of PRX. Furthermore, our results suggest that the induction of Nurr1 gene expression by PRX may be mediated by D3 DA receptor. PMID:15740846

  10. Characterization of free radical-induced base damage in DNA at biologically relevant levels

    International Nuclear Information System (INIS)

    DNA damage induced by oxygen radicals, e.g., hydroxyl radicals generated in living cells either by cellular metabolism or external agents such as ionizing radiations, appears to play an important role in mutagenesis, carcinogenesis, and aging. Elucidation of the chemical nature of such DNA lesions at biologically significant quantities is required for the assessment of their biological consequences and repair. For this purpose, a sensitive method using gas chromatography-mass spectrometry with the selected-ion-monitoring technique (GC-MS/SIM) was developed in the present work. DNA was exposed to hydroxyl radicals and hydrogen atoms produced by ionizing radiation in N2O-saturated aqueous solution. DNA samples were subsequently hydrolyzed with formic acid, trimethylsilylated, and analyzed by GC-MS/SIM. Characteristic ions from previously known mass spectra of DNA base products as their trimethylsilyl derivatives were recorded and the area counts of each ion were integrated. From these acquired data, a partial mass spectrum of each product was generated and then compared with those of authentic materials. This technique permitted the detection and characterization of a large number of free radical-induced based products of DNA, i.e., 5,6-dihydrothymine, 5-hydroxy-5,6-dihydrothymine, 5-hydroxymethyluracil, 5-hydroxyuracil, 5-hydroxycytosine, thymine glycol, 4,6-diamino-5-formamidopyrimidine, 8-hydroxyadenine, 2,6-diamino-4-hydroxy-5-formamidopyrimidine, and 8-hydroxyguanine, simultaneously in a single sample after radiation doses from 0.1 to 10 Gy. Detectable amounts of the base products were found to be as low as approximately 10 fmol per injection

  11. TaBoo SeArch Algorithm with a Modified Inverse Histogram for Reproducing Biologically Relevant Rare Events of Proteins.

    Science.gov (United States)

    Harada, Ryuhei; Takano, Yu; Shigeta, Yasuteru

    2016-05-10

    The TaBoo SeArch (TBSA) algorithm [ Harada et al. J. Comput. Chem. 2015 , 36 , 763 - 772 and Harada et al. Chem. Phys. Lett. 2015 , 630 , 68 - 75 ] was recently proposed as an enhanced conformational sampling method for reproducing biologically relevant rare events of a given protein. In TBSA, an inverse histogram of the original distribution, mapped onto a set of reaction coordinates, is constructed from trajectories obtained by multiple short-time molecular dynamics (MD) simulations. Rarely occurring states of a given protein are statistically selected as new initial states based on the inverse histogram, and resampling is performed by restarting the MD simulations from the new initial states to promote the conformational transition. In this process, the definition of the inverse histogram, which characterizes the rarely occurring states, is crucial for the efficiency of TBSA. In this study, we propose a simple modification of the inverse histogram to further accelerate the convergence of TBSA. As demonstrations of the modified TBSA, we applied it to (a) hydrogen bonding rearrangements of Met-enkephalin, (b) large-amplitude domain motions of Glutamine-Binding Protein, and (c) folding processes of the B domain of Staphylococcus aureus Protein A. All demonstrations numerically proved that the modified TBSA reproduced these biologically relevant rare events with nanosecond-order simulation times, although a set of microsecond-order, canonical MD simulations failed to reproduce the rare events, indicating the high efficiency of the modified TBSA. PMID:27070761

  12. Biological Production of a Hydrocarbon Fuel Intermediate Polyhydroxybutyrate (Phb) from a Process Relevant Lignocellulosic Derived Sugar

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Wei; Mohagheghi, Ali; Mittal, Ashutosh; Pilath, Heidi; Johnson, David K.

    2015-03-22

    PHAs are synthesized by many microorganisms to serve as intracellular carbon storage molecules. In some bacterial strains, PHB can account for up to 80% of cell mass. In addition to its application in the packaging sector, PHB also has great potential as an intermediate in the production of hydrocarbon fuels. PHB can be thermally depolymerized and decarboxylated to propene which can be upgraded to hydrocarbon fuels via commercial oligomerization technologies. In recent years a great effort has been made in bacterial production of PHB, yet the production cost of the polymer is still much higher than conventional petrochemical plastics. The high cost of PHB is because the cost of the substrates can account for as much as half of the total product cost in large scale fermentation. Thus searching for cheaper and better substrates is very necessary for PHB production. In this study, we demonstrate production of PHB by Cupriavidus necator from a process relevant lignocellulosic derived sugar stream, i.e., saccharified hydrolysate slurry from pretreated corn stover. Good cell growth was observed on slurry saccharified with advanced enzymes and 40~60% of PHB was accumulated in the cells. The mechanism of inhibition in the toxic hydrolysate generated by pretreatment and saccharification of biomass, will be discussed.

  13. Next generation techniques in the high resolution spectroscopy of biologically relevant molecules.

    Science.gov (United States)

    Neill, Justin L; Douglass, Kevin O; Pate, Brooks H; Pratt, David W

    2011-04-28

    Recent advances in the technology of test and measurement equipment driven by the computer and telecommunications industries have made possible the development of a new broadband, Fourier-transform microwave spectrometer that operates on principles similar to FTNMR. This technique uses a high sample-rate arbitrary waveform generator to construct a phase-locked chirped microwave pulse that gives a linear frequency sweep over a wide frequency range in 1 μs. The chirped pulse efficiently polarizes the molecular sample at all frequencies lying within this band. The subsequent free induction decay of this polarization is measured with a high-speed digitizer and then fast Fourier-transformed to yield a broadband, frequency-resolved rotational spectrum, spanning up to 11.5 GHz and containing lines that are as narrow as 100 kHz. This new technique is called chirped-pulse Fourier transform microwave (CP-FTMW) spectroscopy. The technique offers the potential to determine the structural and dynamical properties of very large molecules solely from fully resolved pure rotational spectra. FTMW double resonance techniques employing a low-resolution UV laser facilitate an easy assignment of overlapping spectra produced by different conformers in the sample. Of particular interest are the energy landscapes of conformationally flexible molecules of biological importance, including studies of their interaction with solvent and/or other weakly bound molecules. An example is provided from the authors' work on p-methoxyphenethylamine, a neurotransmitter, and its complexes with water. PMID:21394332

  14. Regulatory T Cells in Colorectal Cancer: From Biology to Prognostic Relevance

    International Nuclear Information System (INIS)

    Regulatory T cells (Tregs) were initially described as “suppressive” lymphocytes in the 1980s. However, it took almost 20 years until the concept of Treg-mediated immune control in its present form was finally established. Tregs are obligatory for self-tolerance and defects within their population lead to severe autoimmune disorders. On the other hand Tregs may promote tolerance for tumor antigens and even hamper efforts to overcome it. Intratumoral and systemic accumulation of Tregs has been observed in various types of cancer and is often linked to worse disease course and outcome. Increase of circulating Tregs, as well as their presence in mesenteric lymph nodes and tumor tissue of patients with colorectal cancer de facto suggests a strong involvement of Tregs in the antitumor control. This review will focus on the Treg biology in view of colorectal cancer, means of Treg accumulation and the controversies regarding their prognostic significance. In addition, a concise overview will be given on how Tregs and their function can be targeted in cancer patients in order to bolster an inherent immune response and/or increase the efficacy of immunotherapeutic approaches

  15. Regulatory T Cells in Colorectal Cancer: From Biology to Prognostic Relevance

    Energy Technology Data Exchange (ETDEWEB)

    Mougiakakos, Dimitrios [Department of Oncology and Pathology, Immune and Gene Therapy Unit, Cancer Centre Karolinska, CCK R8:01, 17176 Stockholm (Sweden)

    2011-03-29

    Regulatory T cells (Tregs) were initially described as “suppressive” lymphocytes in the 1980s. However, it took almost 20 years until the concept of Treg-mediated immune control in its present form was finally established. Tregs are obligatory for self-tolerance and defects within their population lead to severe autoimmune disorders. On the other hand Tregs may promote tolerance for tumor antigens and even hamper efforts to overcome it. Intratumoral and systemic accumulation of Tregs has been observed in various types of cancer and is often linked to worse disease course and outcome. Increase of circulating Tregs, as well as their presence in mesenteric lymph nodes and tumor tissue of patients with colorectal cancer de facto suggests a strong involvement of Tregs in the antitumor control. This review will focus on the Treg biology in view of colorectal cancer, means of Treg accumulation and the controversies regarding their prognostic significance. In addition, a concise overview will be given on how Tregs and their function can be targeted in cancer patients in order to bolster an inherent immune response and/or increase the efficacy of immunotherapeutic approaches.

  16. Meta-analysis of muscle transcriptome data using the MADMuscle database reveals biologically relevant gene patterns

    Directory of Open Access Journals (Sweden)

    Teusan Raluca

    2011-02-01

    Full Text Available Abstract Background DNA microarray technology has had a great impact on muscle research and microarray gene expression data has been widely used to identify gene signatures characteristic of the studied conditions. With the rapid accumulation of muscle microarray data, it is of great interest to understand how to compare and combine data across multiple studies. Meta-analysis of transcriptome data is a valuable method to achieve it. It enables to highlight conserved gene signatures between multiple independent studies. However, using it is made difficult by the diversity of the available data: different microarray platforms, different gene nomenclature, different species studied, etc. Description We have developed a system tool dedicated to muscle transcriptome data. This system comprises a collection of microarray data as well as a query tool. This latter allows the user to extract similar clusters of co-expressed genes from the database, using an input gene list. Common and relevant gene signatures can thus be searched more easily. The dedicated database consists in a large compendium of public data (more than 500 data sets related to muscle (skeletal and heart. These studies included seven different animal species from invertebrates (Drosophila melanogaster, Caenorhabditis elegans and vertebrates (Homo sapiens, Mus musculus, Rattus norvegicus, Canis familiaris, Gallus gallus. After a renormalization step, clusters of co-expressed genes were identified in each dataset. The lists of co-expressed genes were annotated using a unified re-annotation procedure. These gene lists were compared to find significant overlaps between studies. Conclusions Applied to this large compendium of data sets, meta-analyses demonstrated that conserved patterns between species could be identified. Focusing on a specific pathology (Duchenne Muscular Dystrophy we validated results across independent studies and revealed robust biomarkers and new pathways of interest

  17. Developing mononuclear copper-active-oxygen complexes relevant to reactive intermediates of biological oxidation reactions.

    Science.gov (United States)

    Itoh, Shinobu

    2015-07-21

    Active-oxygen species generated on a copper complex play vital roles in several biological and chemical oxidation reactions. Recent attention has been focused on the reactive intermediates generated at the mononuclear copper active sites of copper monooxygenases such as dopamine β-monooxygenase (DβM), tyramine β-monooxygenase (TβM), peptidylglycine-α-hydroxylating monooxygenase (PHM), and polysaccharide monooxygenases (PMO). In a simple model system, reaction of O2 and a reduced copper(I) complex affords a mononuclear copper(II)-superoxide complex or a copper(III)-peroxide complex, and subsequent H(•) or e(-)/H(+) transfer, which gives a copper(II)-hydroperoxide complex. A more reactive species such as a copper(II)-oxyl radical type species could be generated via O-O bond cleavage of the peroxide complex. However, little had been explored about the chemical properties and reactivity of the mononuclear copper-active-oxygen complexes due to the lack of appropriate model compounds. Thus, a great deal of effort has recently been made to develop efficient ligands that can stabilize such reactive active-oxygen complexes in synthetic modeling studies. In this Account, I describe our recent achievements of the development of a mononuclear copper(II)-(end-on)superoxide complex using a simple tridentate ligand consisting of an eight-membered cyclic diamine with a pyridylethyl donor group. The superoxide complex exhibits a similar structure (four-coordinate tetrahedral geometry) and reactivity (aliphatic hydroxylation) to those of a proposed reactive intermediate of copper monooxygenases. Systematic studies based on the crystal structures of copper(I) and copper(II) complexes of the related tridentate supporting ligands have indicated that the rigid eight-membered cyclic diamine framework is crucial for controlling the geometry and the redox potential, which are prerequisites for the generation of such a unique mononuclear copper(II)-(end-on)superoxide complex

  18. The scaling law of climate change and its relevance to assessing (palaeo)biological responses

    Science.gov (United States)

    Kiessling, Wolfgang; Eichenseer, Kilian

    2014-05-01

    interglacials, are not monotonic, but punctuated by short-term cooling intervals. The fossil record tells us that biodiversity responded dramatically to ancient intervals of climate warming. We can now see that the apparently slower rates of change in some mass extinctions (Permian-Triassic, Triassic-Jurassic) were greater than today when the scaling law is considered. This reassures us that studying deep time patterns of organismic response to climate change is a worthwhile endeavor that is relevant for predicting the future. References Burrows, M. T., Schoeman, D. S., Buckley, L. B., Moore, P., Poloczanska, E. S., Brander, K. M., Brown, C., Bruno, J. F., Duarte, C. M., Halpern, B. S., Holding, J., Kappel, C. V., Kiessling, W., O'Connor, M. I., Pandolfi, J. M., Parmesan, C., Schwing, F. B., Sydeman, W. J., and Richardson, A. J.: The pace of shifting climate in marine and terrestrial ecosystems, Science, 334, 652-655, 2011. Gingerich, P. D.: Quantification and comparison of evolutionary rates, American Journal of Science, 293A, 453-478, 1993. Sadler, P. M.: Sediment accumulation rates and the completeness of stratigraphic sections, Journal of Geology, 89, 569-584, 1981. Sun, Y., Joachimski, M. M., Wignall, P. B., Yan, C., Chen, Y., Jiang, H., Wang, L., and Lai, X.: Lethally hot temperatures during the Early Triassic greenhouse, Science, 338, 366-370, 2012.

  19. Dinitrogen and Related Chemistry of the Lanthanides: A Review of the Reductive Capture of Dinitrogen, As Well As Mono- and Di-aza Containing Ligand Chemistry of Relevance to Known and Postulated Metal Mediated Dinitrogen Derivatives

    Directory of Open Access Journals (Sweden)

    Damien N. Stringer

    2010-02-01

    Full Text Available This paper reviews the current array of complexes of relevance to achieving lanthanide mediated nitrogen fixation. A brief history of nitrogen fixation is described, including a limited discussion of successful transition metal facilitated nitrogen fixation systems. A detailed discussion of the numerous lanthanide-nitrogen species relevant to nitrogen fixation are discussed and are related to the Chatt cycle for nitrogen fixation.

  20. Biological Fixation of N2 in Mono and Polyspecific Legume Pasture in the Humid Mediterranean Zone of Chile Fijación Biológica de N2 en Praderas Mono y Poliespecíficas de Leguminosas en la Zona Mediterránea Húmeda de Chile

    Directory of Open Access Journals (Sweden)

    Soledad Espinoza

    2011-03-01

    Full Text Available Despite annual legume pasture are of great importance for dryland agricultural systems in Mediterranean environments, there are few studies of N2 biological fixation (NBF reported in Chile. In this study the NBF of four annual legume species: subterranean clover (Trifolium subterraneum L., yellow serradella (Ornithopus compressus L., arrow-leaf clover (T. vesiculosum L., and crimson clover (T. incarnatum L. (Experiment 1, as well as seven mixtures of these species (Experiment 2 were assessed. The NBF was measured by the 15N natural abundance technique. The objective was to determine NBF in the legume species and in distinct mixtures used. The study was carried out in an Andisol of the Andean Precordillera located in the humid Mediterranean zone of Chile. Pasture was evaluated for biomass; and total N and natural abundance of 15N were analyzed in plant material samples. In Experiment 1 (monospecific legume species pasture, N derived from fixation ranged between 43 and 147 kg N ha-1 and where T. vesiculosum and T. subterraneum presented statistical differences (P ≤ 0.05 in connection with the other species. In the legume mixtures (Experiment 2, N derived by fixation varied between 97 and 214 kg N ha-1 where the 50-50 mixtures (T. subterraneum and O. compressus, or T. subterraneum and T. vesiculosum, respectively had the highest N fixation. Fixed N ranged between 12 and 25 kg N t-1 DM, showing significant differences among mono and polyspecific legume species.A pesar de la gran importancia que las praderas de leguminosas tienen en los sistemas agrícolas de secano en ambientes mediterráneos, existe muy poca información sobre la fijación biológica de N2 (FBN reportada en Chile. En este estudio se evaluó la FBN en cuatro leguminosas forrajeras anuales: trébol subterráneo (Trifolium subterraneum L., serradela amarilla (Ornithopus compressus L., trébol vesiculoso (T. vesiculosum L. y trébol encarnado (T. incarnatum L. (Experimento 1, adem

  1. Quantum Dots: An Insight and Perspective of Their Biological Interaction and How This Relates to Their Relevance for Clinical Use

    Directory of Open Access Journals (Sweden)

    Martin J. D. Clift, Vicki Stone

    2012-01-01

    Full Text Available Due to their novel physico-chemical characteristics, semi-conductor nanocrystal quantum dots (QDs provide an advantageous perspective towards numerous different consumer and medical applications. The most notable potential application of QDs is their use as therapeutic and diagnostic tools in nanomedicine. Despite the many benefits posed by QDs, the proposed, intentional exposure to humans has raised concerns towards their potential impact upon human health. These concerns are predominantly based upon the heterogeneous composition of QDs, which most commonly comprises of a cadmium-based core and zinc sulphide shell. Whilst other nanoparticle (NP types possess a similar structure to QDs (i.e. core-shell technology (e.g. Fe2O3, Au and superparamagnetic iron oxide NPs, the importance of the concerns surrounding human exposure to QDs is amplified further since, due to the sophisticated chemical and light-emitting properties of QDs, the use of these NPs within any (nanomedical setting/application could be suggested as realistic, rather than simply an advantageous possibility. It is therefore imperative that a thorough understanding of how QDs interact with various biological systems, predominantly those relative to humans and what the consequences of such interactions are is gained with extreme alacrity. It is the aim of this review to highlight the current knowledge base of QD-biological system interactions, where the knowledge gaps (still remain and how the understanding of this interaction relates to the most notable of applications for QDs; their clinical relevance.

  2. How Long Is Mono Contagious?

    Science.gov (United States)

    ... en español ¿Por cuánto tiempo es contagiosa la mononucleosis? The way mono works in the body is ... Here's how it works: Mono is short for mononucleosis . It is caused by an infection with the ...

  3. Functionally relevant microorganisms to enhanced biological phosphorus removal performance at full-scale wastewater treatment plants in the United States.

    Science.gov (United States)

    Gu, April Z; Saunders, A; Neethling, J B; Stensel, H D; Blackall, L L

    2008-08-01

    The abundance and relevance ofAccumulibacter phosphatis (presumed to be polyphosphate-accumulating organisms [PAOs]), Competibacter phosphatis (presumed to be glycogen-accumulating organisms [GAOs]), and tetrad-forming organisms (TFOs) to phosphorus removal performance at six full-scale enhanced biological phosphorus removal (EBPR) wastewater treatment plants were investigated. Coexistence of various levels of candidate PAOs and GAOs were found at these facilities. Accumulibacter were found to be 5 to 20% of the total bacterial population, and Competibacter were 0 to 20% of the total bacteria population. The TFO abundance varied from nondetectable to dominant. Anaerobic phosphorus (P) release to acetate uptake ratios (P(rel)/HAc(up)) obtained from bench tests were correlated positively with the abundance ratio of Accumulibacter/(Competibacter +TFOs) and negatively with the abundance of (Competibacter +TFOs) for all plants except one, suggesting the relevance of these candidate organisms to EBPR processes. However, effluent phosphorus concentration, amount of phosphorus removed, and process stability in an EBPR system were not directly related to high PAO abundance or mutually exclusive with a high GAO fraction. The plant that had the lowest average effluent phosphorus and highest stability rating had the lowest P(rel)/HAc(up) and the most TFOs. Evaluation of full-scale EBPR performance data indicated that low effluent phosphorus concentration and high process stability are positively correlated with the influent readily biodegradable chemical oxygen demand-to-phosphorus ratio. A system-level carbon-distribution-based conceptual model is proposed for capturing the dynamic competition between PAOs and GAOs and their effect on an EBPR process, and the results from this study seem to support the model hypothesis. PMID:18751532

  4. Alkali Metal Ion Complexes with Phosphates, Nucleotides, Amino Acids, and Related Ligands of Biological Relevance. Their Properties in Solution.

    Science.gov (United States)

    Crea, Francesco; De Stefano, Concetta; Foti, Claudia; Lando, Gabriele; Milea, Demetrio; Sammartano, Silvio

    2016-01-01

    Alkali metal ions play very important roles in all biological systems, some of them are essential for life. Their concentration depends on several physiological factors and is very variable. For example, sodium concentrations in human fluids vary from quite low (e.g., 8.2 mmol dm(-3) in mature maternal milk) to high values (0.14 mol dm(-3) in blood plasma). While many data on the concentration of Na(+) and K(+) in various fluids are available, the information on other alkali metal cations is scarce. Since many vital functions depend on the network of interactions occurring in various biofluids, this chapter reviews their complex formation with phosphates, nucleotides, amino acids, and related ligands of biological relevance. Literature data on this topic are quite rare if compared to other cations. Generally, the stability of alkali metal ion complexes of organic and inorganic ligands is rather low (usually log K  Na(+) > K(+) > Rb(+) > Cs(+). For example, for citrate it is: log K ML = 0.88, 0.80, 0.48, 0.38, and 0.13 at 25 °C and infinite dilution. Some considerations are made on the main aspects related to the difficulties in the determination of weak complexes. The importance of the alkali metal ion complexes was also studied in the light of modelling natural fluids and in the use of these cations as probes for different processes. Some empirical relationships are proposed for the dependence of the stability constants of Na(+) complexes on the ligand charge, as well as for correlations among log K values of NaL, KL or LiL species (L = generic ligand). PMID:26860301

  5. Dose addition models based on biologically-relevant reductions in fetal testosterone accurately predict postnatal reproductive tract alterations by a phthalate mixture in rats

    Science.gov (United States)

    Challenges in cumulative risk assessment of anti-androgenic phthalate mixtures include a lack of data on all the individual phthalates and difficulty determining the biological relevance of reduction in fetal testosterone (T) on postnatal development. The objectives of the curren...

  6. Design, Development, and Psychometric Analysis of a General, Organic, and Biological Chemistry Topic Inventory Based on the Identified Main Chemistry Topics Relevant to Nursing Clinical Practice

    Science.gov (United States)

    Brown, Corina E.

    2013-01-01

    This two-stage study focused on the undergraduate nursing course that covers topics in general, organic, and biological (GOB) chemistry. In the first stage, the central objective was to identify the main concepts of GOB chemistry relevant to the clinical practice of nursing. The collection of data was based on open-ended interviews of both nursing…

  7. Physical-chemical characterization of nanoparticles in relevant biological environments and their interactions with the cell surface

    OpenAIRE

    Di Silvio, Desire

    2015-01-01

    Nanoparticles (NPs) are versatile tools for nanomedicine and tuning features such as material, size and charge, imaging and targeting can be accomplished. However, NPs behaviour in vivo is modified upon interaction with the biological matter and formation of a protein corona (PC) coating the NP. The PC determines the NP biological identity and it is the ultimate interface with the surrounding environment. Therefore, a deep characterization of the NPs in biological media is important to predic...

  8. Evaluating Emotional Sensitivity and Tolerance Factors in the Prediction of Panic-Relevant Responding to a Biological Challenge

    OpenAIRE

    Kutz, Amanda; Marshall, Erin; Bernstein, Amit; Zvolensky, Michael J.

    2010-01-01

    The current study investigated anxiety sensitivity, distress tolerance (Simons & Gaher, 2005), and discomfort intolerance (Schmidt, Richey, Cromer, & Buckner, 2007) in relation to panic-relevant responding (i.e., panic attack symptoms and panic-relevant cognitions) to a 10% carbon-dioxide enriched air challenge. Participants were 216 adults (52.6% female; M age = 22.4, SD = 9.0). A series of hierarchical multiple regressions was conducted with covariates of negative affectivity and past-year ...

  9. Festival nimega Mono / Ivar Sakk

    Index Scriptorium Estoniae

    Sakk, Ivar, 1962-

    2015-01-01

    Haapsalu graafilise disaini festival Haapsalu Linnagaleriis: sisaldab ülevaate- ja teemanäitust ning väikest sümpoosioni. Temaatilise aastanäituse motiiv on "MONO". Plakateid on ka välismaa tegijatelt. Kuraator Marko Kekishev

  10. Symmetrization of mono\\"ids as hypergroups

    OpenAIRE

    Henry, Simon

    2013-01-01

    We adapt the construction of the Grothendieck group associated to a commutative mono\\"id to handle idempotent mono\\"ids. Our construction works for a restricted class of commutative mono\\"ids, it agrees with the Grothendieck group construction in many cases and yields a hypergroup which solves the universal problem for morphisms to hypergroups. It gives the expected non-trivial hypergroup construction in the case of idempotent mono\\"ids.

  11. Sex Differences in Panic-Relevant Responding to a 10% Carbon Dioxide-Enriched Air Biological Challenge

    OpenAIRE

    Nillni, Yael I.; Berenz, Erin C.; Kelly J. Rohan; Zvolensky, Michael J.

    2011-01-01

    The current study examined sex differences in psychological (i.e., self-reported anxiety, panic symptoms, and avoidance) and physiological (i.e., heart rate and skin conductance level) response to, and recovery from, a laboratory biological challenge. Participants were a community-recruited sample of 128 adults (63.3% women; Mage = 23.2 years, SD = 8.9) who underwent a 4-minute 10% CO2-enriched air biological challenge. As predicted, women reported more severe physical panic symptoms and avoi...

  12. Classical conditioning of sexual arousal in women and men: effects of varying awareness and biological relevance of the conditioned stimulus.

    Science.gov (United States)

    Hoffmann, Heather; Janssen, Erick; Turner, Stefanie L

    2004-02-01

    Classical conditioning of sexual arousal has previously been demonstrated in human males but not in females. This study explored the role of classical (Pavlovian) conditioning in the activation of genital sexual arousal in both women and men, and assessed the effects of varying conditioned stimulus (CS) duration (subliminal/conscious) and relevance (sexually relevant/irrelevant). Twenty-seven female and 29 male participants received either subliminal or conscious presentations of a photograph of either a sexually relevant (abdomen of the opposite sex) or irrelevant (gun) CS+, which was followed by the unconditioned stimulus (US-erotic film clip). A CS-, a stimulus not paired with the US, was also included in the 11 conditioning trials. Ten participants were assigned to a control group that received unpaired presentations of the CS+, CS-, and the US. Both women and men showed more evidence of conditioning to the abdomen than to the gun when the CS was presented subliminally. When consciously perceived CSs were used, however, gender differences emerged. Men again showed the expected cue-to-consequence specificity but women showed the opposite effect, that is, conditioned arousal to the sexually irrelevant rather than to the relevant CS. The latter finding may be due to increased autonomic nervous system arousal associated with the irrelevant CS (gun). Skin conductance responses indicated more general arousal to the gun than to the male abdomen in women. This is the first study to compare the effects of a subliminal and conscious CS and to find classical conditioning of sexual arousal in women. PMID:14739689

  13. The Interaction of Nicotine Withdrawal and Panic Disorder in the Prediction of Panic-relevant Responding to a Biological Challenge

    OpenAIRE

    Leyro, Teresa M.; Zvolensky, Michael J.

    2012-01-01

    The current investigation evaluated nicotine withdrawal symptoms elicited by 12 hours of smoking deprivation on anxious and fearful responding to bodily sensations among daily smokers with and without Panic Disorder (PD). It was hypothesized that smokers with PD who were experiencing greater levels of nicotine withdrawal would experience the greatest levels of fearful responding to, and delayed recovery from, a 10% carbon dioxide-enriched air (CO2) biological challenge procedure. Participants...

  14. A systems biology approach to identify intelligence quotient score-related genomic regions, and pathways relevant to potential therapeutic treatments

    OpenAIRE

    Min Zhao; Lei Kong; Hong Qu

    2014-01-01

    Although the intelligence quotient (IQ) is the most popular intelligence test in the world, little is known about the underlying biological mechanisms that lead to the differences in human. To improve our understanding of cognitive processes and identify potential biomarkers, we conducted a comprehensive investigation of 158 IQ-related genes selected from the literature. A genomic distribution analysis demonstrated that IQ-related genes were enriched in seven regions of chromosome 7 and the X...

  15. Phosphorylation Status of the Parvovirus Minute Virus of Mice Particle: Mapping and Biological Relevance of the Major Phosphorylation Sites

    OpenAIRE

    Maroto, Beatriz; Ramírez, Juan C.; Almendral, José M.

    2000-01-01

    The core of the VP-1 and VP-2 proteins forming the T=1 icosahedral capsid of the prototype strain of the parvovirus minute virus of mice (MVMp) share amino acids sequence and a common three-dimensional structure; however, the roles of these polypeptides in the virus infection cycle differ. To gain insights into this paradox, the nature, distribution, and biological significance of MVMp particle phosphorylation was investigated. The VP-1 and VP-2 proteins isolated from purified empty capsids a...

  16. SysBioCube: A Data Warehouse and Integrative Data Analysis Platform Facilitating Systems Biology Studies of Disorders of Military Relevance.

    Science.gov (United States)

    Chowbina, Sudhir; Hammamieh, Rasha; Kumar, Raina; Chakraborty, Nabarun; Yang, Ruoting; Mudunuri, Uma; Jett, Marti; Palma, Joseph M; Stephens, Robert

    2013-01-01

    SysBioCube is an integrated data warehouse and analysis platform for experimental data relating to diseases of military relevance developed for the US Army Medical Research and Materiel Command Systems Biology Enterprise (SBE). It brings together, under a single database environment, pathophysio-, psychological, molecular and biochemical data from mouse models of post-traumatic stress disorder and (pre-) clinical data from human PTSD patients.. SysBioCube will organize, centralize and normalize this data and provide an access portal for subsequent analysis to the SBE. It provides new or expanded browsing, querying and visualization to provide better understanding of the systems biology of PTSD, all brought about through the integrated environment. We employ Oracle database technology to store the data using an integrated hierarchical database schema design. The web interface provides researchers with systematic information and option to interrogate the profiles of pan-omics component across different data types, experimental designs and other covariates. PMID:24303294

  17. Neocryptolepine: A Promising Indoloisoquinoline Alkaloid with Interesting Biological Activity. Evaluation of the Drug and its Most Relevant Analogs.

    Science.gov (United States)

    Larghi, Enrique L; Bracca, Andrea B J; Arroyo Aguilar, Abel A; Heredia, Daniel A; Pergomet, Jorgelina L; Simonetti, Sebastian O; Kaufman, Teodoro S

    2015-01-01

    Plants are one of the most important resources for the discovery of new drugs. The potential of natural compounds as new drug leads is clearly illustrated by the discovery and development of many modern medicines. This is an encouraging factor that drives natural products research in the vegetable kingdom. Neocryptolepine is a tetracyclic nitrogen heterocycle isolated from the African climber Cryptolepis sanguinolenta, which is widely used in traditional African medicine in many countries of Central and West Africa. The natural product is one of the representative examples of the small family of indolo[2,3-b]quinoline alkaloids, being endowed of multiple biological activities, including DNA-binding and inhibition of the enzyme topoisomerase II. It is also cytotoxic, antibacterial, antifungal and molluscicidal, also displaying antiprotozoal activity, particularly as antitrypanosomal, antileishmanial, antischistosomal and antiplasmodial. Some of these activities have been related to the product's ability to bind to DNA and to inhibit topoisomerase II; however, the exact mechanisms behind all of the observed bioactivities have not been comprehensively clarified. Major research activities regarding neocryptolepine have been focused into two seemingly opposite fields, related to its cytotoxic and antimalarial properties. Optimization of the natural product as a cytotoxic agent implied improvements in its bioavailability and activity, while the need of non-cytotoxic compounds guided the design and optimization of antimalarial agents. Therefore, the aim of the present article is to systematically review the current knowledge about the diversity of the biological activities related to neocryptolepine, its analogs and derivatives. PMID:25915612

  18. Improving biological relevancy of transcriptional biomarkers experiments by applying the MIQE guidelines to pre-clinical and clinical trials.

    Science.gov (United States)

    Dooms, M; Chango, A; Barbour, E; Pouillart, P; Abdel Nour, A M

    2013-01-01

    The "Minimum Information for the Publication of qPCR Experiments" (MIQE [3]) guidelines are very much targeted at basic research experiments and have to our knowledge not been applied to qPCR assays carried out in the context of clinical trials. This report details the use of the MIQE qPCR app for iPhone (App Store, Apple) to assess the MIQE compliance of one clinical and five pre-clinical trials. This resulted in the need to include 14 modifications that make the guidelines more relevant for the assessment of this special type of application. We also discuss the need for flexibility, since while some parameters increase experimental quality, they also require more reagents and more time, which is not always feasible in a clinical setting. PMID:22910527

  19. Predictive variables for the biological behaviour of basal cell carcinoma of the face: relevance of morphometry of the nuclei.

    Science.gov (United States)

    Appel, T; Bierhoff, E; Appel, K; von Lindern, J-J; Bergé, S; Niederhagen, B

    2003-06-01

    We did a morphometric analysis of 130 histological sections of basal cell carcinoma (BCC) of the face to find out whether morphometric variables in the structure of the nuclei of BCC cells could serve as predictors of the biological behaviour. We considered the following variables: maximum and minimum diameters, perimeter, nuclear area and five form factors that characterise and quantify the shape of a structure (axis ratio, shape factor, nuclear contour index, nuclear roundness and circumference ratio). We did a statistical analysis of primary and recurring tumours and four histology-based groups (multifocal superficial BCCs, nodular BCCs, sclerosing BCCs and miscellaneous forms) using a two-sided t test for independent samples. Multifocal superficial BCCs showed significantly smaller values for the directly measured variables (maximum and minimum diameters, perimeter and nuclear area). Morphometry could not distinguish between primary and recurring tumours. PMID:12804537

  20. Evaluation of some procedures relevant to the determination of trace elemental components in biological materials by destructive neutron activation analysis

    Energy Technology Data Exchange (ETDEWEB)

    Berry, D.L.

    1979-01-01

    The development of a simplified procedure for the analysis of biological materials by destructive neutron activation analysis (DNAA) is described. The sample manipulations preceding gamma ray assay were investigated as five specific stages of processing: (1) pre-irradiation treatment; (2) sample irradiation; (3) removal of the organic matrix; (4) removal of interfering radioactivities; and (5) concentration and separation of analyte activities. Each stage was evaluated with respect to susceptibility to sample contamination, loss of trace elemental components, and compatibility with other operations in the overall DNAA procedures. A complete DNAA procedure was proposed and evaluated for the analysis of standard bovine liver and blood samples. The DNAA system was effective for the determination of As, Cu, Fe, Hg, Mo, Rb, Sb, Se, and Zn without yield determinations and with a minimum turn-around time of approximately 3 days.

  1. Evaluation of some procedures relevant to the determination of trace elemental components in biological materials by destructive neutron activation analysis

    International Nuclear Information System (INIS)

    The development of a simplified procedure for the analysis of biological materials by destructive neutron activation analysis (DNAA) is described. The sample manipulations preceding gamma ray assay were investigated as five specific stages of processing: (1) pre-irradiation treatment; (2) sample irradiation; (3) removal of the organic matrix; (4) removal of interfering radioactivities; and (5) concentration and separation of analyte activities. Each stage was evaluated with respect to susceptibility to sample contamination, loss of trace elemental components, and compatibility with other operations in the overall DNAA procedures. A complete DNAA procedure was proposed and evaluated for the analysis of standard bovine liver and blood samples. The DNAA system was effective for the determination of As, Cu, Fe, Hg, Mo, Rb, Sb, Se, and Zn without yield determinations and with a minimum turn-around time of approximately 3 days

  2. Nitrogen-containing derivatives of mono terpenoids: approaches to the synthesis and prospects for usage

    International Nuclear Information System (INIS)

    The article generalizes the research devoted to obtaining, structure and properties of nitrogen-containing derivatives of mono terpenoids from plant essential oils. The information on usage of amination reagents and catalysts is presented. Biological activity versus molecular structure dependence of nitrogen-containing derivatives of mono terpenoids is characterized.The structure of the new obtained compounds has been determined by physical-chemical methods (IR, 13C NMR spectroscopy, X-ray analysis)

  3. Biological Production of a Hydrocarbon Fuel Intermediate Polyhydroxybutyrate (PHB) from a Process Relevant Lignocellulosic Derived Sugar (Poster)

    Energy Technology Data Exchange (ETDEWEB)

    Wang, W.; Mittal, A.; Mohagheghi, A.; Johnson, D. K.

    2014-04-01

    PHAs are synthesized by many microorganisms to serve as intracellular carbon storage molecules. In some bacterial strains, PHB can account for up to 80% of cell mass. In addition to its application in the packaging sector, PHB also has great potential as an intermediate in the production of hydrocarbon fuels. PHB can be thermally depolymerized and decarboxylated to propene which can be upgraded to hydrocarbon fuels via commercial oligomerization technologies. Cupriavidus necator is the microorganism that has been most extensively studied and used for PHB production on an industrial scale; However the substrates used for producing PHB are mainly fructose, glucose, sucrose, fatty acids, glycerol, etc., which are expensive. In this study, we demonstrate production of PHB from a process relevant lignocellulosic derived sugar stream, i.e., saccharified slurry from pretreated corn stover. The strain was first investigated in shake flasks for its ability to utilize glucose, xylose and acetate. In addition, the strain was also grown on pretreated lignocellulose hydrolyzate slurry and evaluated in terms of cell growth, sugar utilization, PHB accumulation, etc. The mechanism of inhibition in the toxic hydrolysate generated by the pretreatment and saccharification process of biomass, was also studied.

  4. The nonconservative property of dissolved molybdenum in the western Taiwan Strait: Relevance of submarine groundwater discharges and biological utilization

    Science.gov (United States)

    Wang, Deli; Xia, Weiwei; Lu, Shuimiao; Wang, Guizhi; Liu, Qian; Moore, Willard S.; Arthur Chen, Chen-Tung

    2016-01-01

    This study examined dissolved Mo and sedimentary Mo along with hydrochemical parameters in the western Taiwan Strait (WTS) in May and August 2012. The results demonstrate that dissolved Mo could be depleted of as high as 10-20 nM during our May sampling period when the nutrient-enriched Min-Zhe coastal current ceased and spring blooms developed. The negative correlation between Chl-a and dissolved Mo suggests the possible involvement of high algal productivity in removing dissolved Mo out of the water column. Specific oceanographic settings (little currents) permitted a high sedimentary enrichment of Mo (>6 µg/g Mo) within the highly productive waters outside the Jiulong River mouth. Possibly, the high algal productivities and consequent organic matter sinks provide a pathway of Mo burial from water columns into sediments. Dissolved Mo was relatively high in groundwater samples, but we observed that submarine groundwater discharges (SGDs) only contributed to a relatively small percentage of the total dissolved Mo pool in WTS. It is probably attributable to the immediate removal of SGD-released Mo ions via adsorption onto newly formed Mn oxides once exposed to oxygenated seawater, followed by an elevated sedimentary Mo accumulation near the SGDs (˜5 µg/g). In addition to metal oxide particle scavenging and sulfide precipitation, we estimated that biological uptake along with Mo adsorption onto organic matter carriers could finally provide more than 10% of the annual sedimentary Mo accumulation in WTS.

  5. Head and neck cancer subtypes with biological and clinical relevance: Meta-analysis of gene-expression data.

    Science.gov (United States)

    De Cecco, Loris; Nicolau, Monica; Giannoccaro, Marco; Daidone, Maria Grazia; Bossi, Paolo; Locati, Laura; Licitra, Lisa; Canevari, Silvana

    2015-04-20

    Head and neck squamous cell carcinoma (HNSCC) is a disease with heterogeneous clinical behavior and response to therapies. Despite the introduction of multimodality treatment, 40-50% of patients with advanced disease recur. Therefore, there is an urgent need to improve the classification beyond the current parameters in clinical use to better stratify patients and the therapeutic approaches. Following a meta-analysis approach we built a large training set to whom we applied a Disease-Specific Genomic Analysis (DSGA) to identify the disease component embedded into the tumor data. Eleven independent microarray datasets were used as validation sets. Six different HNSCC subtypes that summarize the aberrant alterations occurring during tumor progression were identified. Based on their main biological characteristics and de-regulated signaling pathways, the subtypes were designed as immunoreactive, inflammatory, human papilloma virus (HPV)-like, classical, hypoxia associated, and mesenchymal. Our findings highlighted a more aggressive behavior for mesenchymal and hypoxia-associated subtypes. The Genomics Drug Sensitivity Project was used to identify potential associations with drug sensitivity and significant differences were observed among the six subtypes. To conclude, we report a robust molecularly defined subtype classification in HNSCC that can improve patient selection and pave the way to the development of appropriate therapeutic strategies. PMID:25821127

  6. Why we should use simpler models if the data allow this: relevance for ANOVA designs in experimental biology

    Directory of Open Access Journals (Sweden)

    Lazic Stanley E

    2008-07-01

    Full Text Available Abstract Background Analysis of variance (ANOVA is a common statistical technique in physiological research, and often one or more of the independent/predictor variables such as dose, time, or age, can be treated as a continuous, rather than a categorical variable during analysis – even if subjects were randomly assigned to treatment groups. While this is not common, there are a number of advantages of such an approach, including greater statistical power due to increased precision, a simpler and more informative interpretation of the results, greater parsimony, and transformation of the predictor variable is possible. Results An example is given from an experiment where rats were randomly assigned to receive either 0, 60, 180, or 240 mg/L of fluoxetine in their drinking water, with performance on the forced swim test as the outcome measure. Dose was treated as either a categorical or continuous variable during analysis, with the latter analysis leading to a more powerful test (p = 0.021 vs. p = 0.159. This will be true in general, and the reasons for this are discussed. Conclusion There are many advantages to treating variables as continuous numeric variables if the data allow this, and this should be employed more often in experimental biology. Failure to use the optimal analysis runs the risk of missing significant effects or relationships.

  7. Detailed characterization of mechanical properties and molecular mobility within dry seed glasses: relevance to the physiology of dry biological systems.

    Science.gov (United States)

    Ballesteros, Daniel; Walters, Christina

    2011-11-01

    Slow movement of molecules in glassy matrices controls the kinetics of chemical and physical reactions in dry seeds. Variation in physiological activity among seeds suggests that there are differences in mobility among seed glasses. Testing this hypothesis is difficult because few tools are available to measure molecular mobility within dry seeds. Here, motional properties within dry pea cotyledons were assessed using dynamic mechanical analysis. The technique detected several molecular relaxations between -80 and +80°C and gave a more detailed description of water content-temperature effects on molecular motion than previously understood from studies of glass formation in seeds at glass transition (Tg). Diffusive movement is delimited by the α relaxation, which appears to be analogous to Tg. β and γ relaxations were also detected at temperatures lower than α relaxations, clearly demonstrating intramolecular motion within the glassy matrix of the pea cotyledon. Glass transitions, or the mechanical counterpart α relaxation, appear to be less relevant to seed aging during dry storage than previously thought. On the other hand, β relaxation occurs at temperature and moisture conditions typically used for seed storage and has established importance for physical aging of synthetic polymer glasses. Our data show that the nature and extent of molecular motion varies considerably with moisture and temperature, and that the hydrated conditions used for accelerated aging experiments and ultra-dry conditions sometimes recommended for seed storage give greater molecular mobility than more standard seed storage practices. We believe characterization of molecular mobility is critical for evaluating how dry seeds respond to the environment and persist through time. PMID:21831210

  8. Endogenous expression of ASLV viral proteins in specific pathogen free chicken embryos: relevance for the developmental biology research field

    Directory of Open Access Journals (Sweden)

    Canto-Soler M Valeria

    2010-10-01

    Full Text Available Abstract Background The use of Specific Pathogen Free (SPF eggs in combination with RCAS retrovirus, a member of the Avian Sarcoma-Leukosis Virus (ASLV family, is of standard practice to study gene function and development. SPF eggs are certified free of infection by specific pathogen viruses of either exogenous or endogenous origin, including those belonging to the ASLV family. Based on this, SPF embryos are considered to be free of ASLV viral protein expression, and consequently in developmental research studies RCAS infected cells are routinely identified by immunohistochemistry against the ASLV viral proteins p19 and p27. Contrary to this generally accepted notion, observations in our laboratory suggested that certified SPF chicken embryos may endogenously express ASLV viral proteins p19 and p27. Since these observations may have significant implications for the developmental research field we further investigated this possibility. Results We demonstrate that certified SPF chicken embryos have transcriptionally active endogenous ASLV loci (ev loci capable of expressing ASLV viral proteins, such as p19 and p27, even when those loci are not capable of producing viral particles. We also show that the extent of viral protein expression in embryonic tissues varies not only among flocks but also between embryos of the same flock. In addition, our genetic screening revealed significant heterogeneity in ev loci composition even among embryos of the same flock. Conclusions These observations have critical implications for the developmental biology research field, since they strongly suggest that the current standard methodology used in experimental studies using the chick embryo and RCAS vectors may lead to inaccurate interpretation of results. Retrospectively, our observations suggest that studies in which infected cells have been identified simply by pan-ASLV viral protein expression may need to be considered with caution. For future studies, they

  9. Synthesis of fluorophore encapsulated silica nanoparticles for the evaluation of the biological fate and toxicity of food relevant nanoparticles

    Science.gov (United States)

    Zane, Andrew Paul

    fluorophores, rhodamine 6G and rhodamine 800, into silica shells for direct monitoring in intestinal epithelial cells and tissues of exposed mice. We show that, for small nanoparticles, a typical Stober-type ammonia driven synthesis does not yield stable fluorescence. This has been observed in literature and is attributed to incompletely hydrolyzed silica precursor causing partial dissolution of the silica shell. We remedy this by applying an arginine driven silica shell synthesis, which is known to produce a denser and more stable product at smaller particle sizes. We show that all three fluorophores can be coated in a simple generalized procedure, and the resulting particles all show stable fluorescence with no evidence of dye leakage. Using these particles, we demonstrate that silica nanoparticles can be observed internalizing into C2BBe1 intestinal epithelial cells, and in the tissues of mice that were fed the particles by gavage. We find direct evidence that the particles are absorbed into circulation and subsequently localize in organs throughout the body. Future efforts will attempt to better quantify this accumulation, as well as generalize the procedure to other food relevant nanoparticles such as TiO2.

  10. Insight into the Local Solvent Environment of Biologically Relevant Iron-nitroysl Systems through Two-Dimensional Infrared Spectroscopy

    Science.gov (United States)

    Brookes, Jennifer Faith

    Iron-nitrosyl systems, particularly in the form of heme proteins, with their iron metal active sites play an important role in biological systems. Heme proteins act as storage, transporters, and receptors for nitric oxide (NO), a signaling molecule that is important in immune, nervous, and cardiovascular systems of mammals. By better understanding the local environment of the active site of NO binding heme proteins we can gain insight into disease in which the NO pathways have been implicated. This is an important step to being able to develop pharmaceuticals targeting NO pathways in humans. Sodium nitroprusside ((SNP, Na2[Fe(CN)5is NO]·2H 2O) investigated as a model system for the active site of nitric oxide binding heme proteins. Using two-dimensional infrared spectroscopy (2D IR) to obtain dephasing dynamics of the nitrosyl stretch (nuNO) in a series of solvents we are able to better understand the local environment of the more complicated metalloproteins. Rigorous line shape analysis is performed by using nonlinear response theory to simulate 2D IR spectra which are then fit to experimental data in an iterative process to extract frequency-frequency correlation functions (FFCFs). The time scales obtained are then correlated to empirical solvent polarity parameters. The analysis of the 2D IR lineshapes reveal that the spectral diffusion timescale of the nuNO in SNP varies from 0.8 -- 4 ps and is negatively correlated with the empirical solvent polarity scales. We continue to investigate NO binding of metalloproteins through 2D IR experiments on nitrophorin 4 (NP4). NP4 is a pH-sensitive NO transporter protein present in the salivary gland of the blood sucking insect Rhodius prolixus which undergoes a pH sensitive structural change between a closed and open conformation allowing for the storage and delivery of NO. The two structures are observed spectroscopically as two distinct pH-dependent nu NO frequencies at ~1904 and ~1917 cm-1. We obtain FFCFs by globally

  11. Biologic

    CERN Document Server

    Kauffman, L H

    2002-01-01

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers ><, entities open to interaction and distinguishing the space that they are not. The boundary algebra of containers and extainers is to biologic what boolean algebra is to classical logic. We show how this formalism encompasses significant parts of the logic of DNA replication, the Dirac formalism for quantum mechanics, formalisms for protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  12. Correlation between γ-ray-induced DNA double-strand breakage and cell killing after biologically relevant doses: analysis by pulsed-field gel electrophoresis

    International Nuclear Information System (INIS)

    We examined the degree of correlation between γ-ray-induced lethality and DNA double-strand breaks (dsbs) after biologically relevant doses of radiation. Radiation lethality was modified by treating 14C-labelled Chinese hamster ovary cells with either of two aminothiols (WR-1065 or WR-255591) and the associated effect on dsb induction was determined by pulsed-field gel electrophoresis (PFGE). The use of phosphorimaging to analyse the distribution of 14C-activity in the gel greatly improved the low-dose resolution of the PFGE assay. Both WR-1065 and WR-255591 protected against dsb induction and lethality to a similar extent after low doses of radiation. although this correlation broke down when supralethal doses were used to induce dsbs. Thus, the level of dsbs induced in these cells as measured by PFGE after survival-curve doses of γ-radiation is consistently predictive of the degree of lethality obtained, implying a cause-effect relationship between these two parameters and confirming previous results obtained using the neutral filter elution assay for dsbs. (author)

  13. Plasma etching on large-area mono-, multi- and quasi-mono crystalline silicon

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Schmidt, Michael Stenbæk; Boisen, Anja;

    2013-01-01

    fabricated using maskless RIE in a O2 and SF6 plasma, and the surface topology was optimized for solar cell applications by varying gas flows, pressure, power and process time. The starting substrates were 156x156 mm p-type, CZ mono-, multi- and quasi-mono crystalline Si wafers, respectively, with a...

  14. Interleukin-2 (IL-2) dependent expression of biologically relevant IL-2 receptors: uncoupling of anti-T3 induced receptor expression with cyclosporin

    International Nuclear Information System (INIS)

    Human peripheral blood T cell expression of IL-2 receptors (IL-2R), detected by both immunocytofluorometry and 125I-IL-2 binding, was studied using lymphocytes stimulated with monoclonal anti-T3 antibodies (Leu-4, OKT3). Lymphocytes, isolated from healthy individuals, were prescreened and classified as Leu-4 responders or non-responders according to 72 h 3H-thymidine incorporation experiments. Leu-4 non-responder lymphocytes, though capable of normal IL-2R expression and IL-2 secretion when cultured with OKT3 (IgG2a), expressed little to no IL-2R nor secreted IL-2 when stimulated with Leu-4 (IgG1). In addition, the amount of IL-2 secreted by Leu-4 stimulated, Leu-4 responder cells, was one-third- to one-fifth of that detected when OKT3 was used as the stimulant. The addition of recombinant IL-2 (rIL-2) to a Leu-4 stimulated, Leu-4 non-responder lymphocyte culture, resulted in the expression of IL-2R and cellular proliferation, indicating that IL-2 upregulated its biologically relevant receptor. As expected, cyclosporin-A (CSA) inhibited the secretion of IL-2 and subsequent proliferation of Leu-4 stimulated, Leu-4 responder cells. Unexpectedly, however, the expression of IL-2R was also blocked. Exogenous rIL-2 partially reversed the effect of CSA on IL-2R expression and proliferation. The results indicate that IL-2 may provide an additional, required signal for optimal IL-2R expression

  15. Effect of Organic Solvents and Biologically Relevant Ions on the Light-Induced DNA Cleavage by Pyrene and Its Amino and Hydroxy Derivatives

    Directory of Open Access Journals (Sweden)

    Hongtao Yu

    2002-09-01

    Full Text Available Abstract: Polycyclic aromatic hydrocarbons (PAHs are a class of carcinogenic compounds that are both naturally and artificially produced. Many PAHs are pro-carcinogens that require metabolic activation. Recently, it has been shown that PAH can induce DNA single strand cleavage and formation of PAH-DNA covalent adduct upon irradiation with UVA light. The light-induced DNA cleavage parallels phototoxicity in one instance. The DNA photocleavage efficiency depends on the structure of the PAHs. This article reports the effect of both organic solvents and the presence of biologically relevant ions, Na+, Mg2+, Ca2+, K+, Fe3+, Cu2+, Zn+2, Mn2+, and I-, on the light-induced DNA cleavage by pyrene, 1-hydroxypyrene and 1-aminopyrene. Since both 1-hydroxypyrene (0.6 μM and 1-aminopyrene (6 μM dissolve well in the minimum organic solvents used (2% methanol, dimethylsulfoxide, and dimethylformamide, increasing the amount of the organic solvent resulted in the decrease of the amount of DNA single strand cleavage caused by the combination effect of 1-hydroxy or 1-aminopyrene and UVA light. The result with the less watersoluble pyrene shows that increase of the amount of the organic solvent can increase the amount of DNA single strand DNA photocleavage cause by the combination of pyrene and UVA light. Therefore, there are two effects by the organic solvents: (i to dissolve PAH and (ii to quench DNA photocleavage. The presence of Fe3+ and Zn2+ enhances, while the presence of Ca2+ and Mn2+ inhibits the DNA photocleavage caused by 1-aminopyrene and UVA light. Other metal ions have minimal effect. This means that the effect of ions on DNA photocleavage by PAHs is complex. The presence of KI enhances DNA photocleavage. This indicates that the triplet-excited state of 1-aminopyrene is involved in causing DNA cleavage

  16. Resonant mono Higgs at the LHC

    Science.gov (United States)

    Basso, Lorenzo

    2016-04-01

    In recent years, the production of a SM particle with large missing transverse momentum, dubbed mono-X searches, have gained increasing attention. After the discovery of the Higgs boson in 2012, the run-II of the LHC will now scrutinise its properties, looking for BSM physics. In particular, one could search for mono-Higgs signals, that are typically studied in models addressing dark matter. However, this signal can appear also in models addressing the neutrino masses, if additional heavier neutrinos with masses at the electroweak scale are present. The latter will couple to the SM neutrinos and the Higgs boson, yielding a type of mono-Higgs signal not considered for dark matter: the resonant production of a Higgs boson and missing energy. In this paper, we address the LHC exclusion power of the latter with dedicated detector simulations, and reinterpret it in a benchmark scenario for neutrino mass generation.

  17. Resonant mono Higgs at the LHC

    CERN Document Server

    Basso, Lorenzo

    2015-01-01

    In recent years, the production of a SM particle with large missing transverse momentum, dubbed mono-X searches, have gained increasing attention. After the discovery of the Higgs boson in 2012, the run-II of the LHC will now scrutinise its properties, looking for BSM physics. In particular, one could search for mono-Higgs signals, that are typically studied in models addressing dark matter. However, this signal can appear also in models addressing the neutrino masses, if additional heavier neutrinos with masses at the electroweak scale are present. The latter will couple to the SM neutrinos and the Higgs boson, yielding a type of mono-Higgs signal not considered for dark matter: the resonant production of a Higgs boson and missing energy. In this paper, we address the LHC exclusion power of the latter with dedicated detector simulations, and reinterpret it in a benchmark model for neutrino mass generation.

  18. Gravity and magnetic investigations of the Mono-Inyo Volcanic Chain, Mono Basin, California

    Science.gov (United States)

    Pera, A. A.; Ponce, D. A.; McPhee, D. K.; Battaglia, M.

    2010-12-01

    The Mono Inyo volcanic chain is a 25-km long, north-south trending series of domes and craters extending southward from Mono Lake and into the west moat of Long Valley Caldera. Based on the Holocene history of eruptions in the area, the chain appears to hold the greatest potential for renewed magmatic activity (Hildreth, 2004). To better characterize the geometry and structure of Mono Basin for future dynamic modeling of the Mono Inyo volcanic chain a new gravity and magnetic survey was conducted. We collected gravity data at over 320 stations in and around the northern and central region of the Mono-Inyo volcanic chain and around Mono Lake in the summer of 2010. Regional gravity data was collected at one-mile spacing and data collected on profile lines was collected at quarter-mile intervals. We collected magnetic data on major roads along several transects across Mono Basin that include one coincident with a seismic refraction line (Hill and others, 1985). Rock samples were collected for analysis of density and magnetic susceptibility. The new gravity and magnetic data will be compiled with pre-existing data from studies dating back to the 1960’s (Pakiser and others, 1960, 1976; Christensen, 1969) to produce new isostatic gravity and magnetic anomaly maps. Preliminary isostatic gravity and magnetic maps from pre-existing data show the presence of gravity and magnetic lows in Mono Lake and Long Valley Caldera where low density volcanic sediments are prevalent; gravity highs were observed to the east and west of Mono Lake and to the east of Long Valley Caldera. A region with a high magnetic anomaly lies to the east of the volcanic chain. Two-dimensional forward modeling of potential field data along profiles that extend across Mono Basin will constrain the density and magnetization distribution, stratification and structural geology of the Mono-Inyo volcanic chain. These efforts are critical to improve dynamic modeling of Sierran range-front faulting and dike

  19. Why are we doing this? The role of personal relevance in developing biological information literacy using cyber Peer-led Team Learning

    OpenAIRE

    Radloff, Jeffrey D; Maybee, C; Slebodnik, Maribeth; Pelaez, Nancy

    2014-01-01

    Student-centered learning necessitates that students engage with an array of materials to develop their own understandings, often requiring students to find and critically engage with biological information. This project describes a course (BIOL 131; Biology II: Development, Structure and Function of Organisms) that utilizes cyber Peer-led Team Learning (cPLTL) as a student-centered approach to enhance students’ biological information literacy. Emphasizing the social aspects of learning, stud...

  20. Mono versus Stereo: Bilingualism's Double Face.

    Science.gov (United States)

    Grutman, Rainier

    1993-01-01

    Offers an application of Mikhail Bakhtin's heteroglossia model, describing literature from a diversified point of view. Analyzes two examples to show nevertheless that Bakhtin unilaterally celebrates "stereo" qualities of language blending, and leaves no room for "mono" texts, which use polyglot devices as borders much more than as bridges between…

  1. Search for Exotic mono-jet and mono-photon signatures with the ATLAS detector

    Directory of Open Access Journals (Sweden)

    Rezvani Reyhaneh

    2013-05-01

    Full Text Available Mono-jet and mono-photon signatures are final states in a variety of scenarios beyond the Standard Model, such as the Large Extra Dimension models, gauge-mediated SUSY breaking scenarios, and models with pair production of Weakly Interacting Massive Particles considered as dark matter candidates. The produced exotic particles do not interact with the detector, resulting in missing transverse energy. The results of searches, performed in the ATLAS experiment at the LHC, for new physics in final states with an energetic jet or photon and large missing transverse energy are presented. The mono-jet search is performed using both 4.6 fb−1 of 7 TeV and 10.5 fb−1 of 8 TeV data, while the mono-photon results correspond to 4.6 fb−1 of 7 TeV data.

  2. Relevancy 101

    Science.gov (United States)

    Lynnes, Chris; Newman, Doug

    2016-01-01

    Where we present an overview on why relevancy is a problem, how important it is and how we can improve it. The topic of relevancy is becoming increasingly important in earth data discovery as our audience is tuned to the accuracy of standard search engines like Google.

  3. MRI in hypertrophic mono- and polyneuropathies

    International Nuclear Information System (INIS)

    Different conditions that may lead to enlarged nerves or nerve roots include hereditary motor and sensory neuropathy (HMSN), neurofibromatosis (NF) type 1, chronic inflammatory demyelinating polyradiculoneuropathy (CIDP), and intraneural perineurioma. Differential diagnosis of hypertrophic mono- and polyradiculopathies remains challenging but is important because of different treatments and prognosis. Magnetic resonance imaging (MRI) can identify the hypertrophic nerve segments and guide a fascicular biopsy. A fascicular biopsy will often be necessary for precise diagnosis

  4. Self-excited mono-ion oscillator

    OpenAIRE

    Dehmelt, Hans; Nagourney, Warren; Sandberg, Jon

    1986-01-01

    We propose self-excitation as a potentially more sensitive technique for studying a mono-ion oscillator of frequency vz ≈ 0.1-100 MHz. This technique also makes only low demands on the harmonicity of the ion oscillation. It should therefore work with inexpensive, easily constructed rf traps. In our analysis, the bound ion between the trap electrodes is represented by an effective circuit resembling that of a piezoelectric quartz crystal. The feedback circuit developed, when operated below sel...

  5. Detection of prognostically relevant genetic abnormalities in childhood B-cell precursor acute lymphoblastic leukaemia: recommendations from the Biology and Diagnosis Committee of iBFM-SG

    OpenAIRE

    Harrison, Christine J; Haas, Oskar A.; Harbott, W; Biondi, Andrea; Stanulla, Martin; Trka, Jan; Izraeli, Shai

    2010-01-01

    Abstract Treatment of childhood acute lymphoblastic leukaemia (ALL) has improved considerably in recent years. A contributing factor has been the improved stratification for treatment according to a number of factors including genetic determinants of outcome. Here we review the current diagnostic criteria of genetic abnormalities in precursor B-ALL (BCP-ALL), including the relevant technical approaches and the application of the most appropriate methods for the detection of each ab...

  6. Elements determination of clinical relevance in biological tissues Dmd{sup mdx}/J dystrophic mice strains investigated by NAA; Determinacao de elementos de relevancia clinica em tecidos biologicos de camundongos distroficos Dmd{sup mdx}/J por AAN

    Energy Technology Data Exchange (ETDEWEB)

    Metairon, Sabrina

    2012-07-01

    In this work the determination of chemistry elements in biological tissues (whole blood, bones and organs) of dystrophic mice, used as animal model of Duchenne Muscular Dystrophy (DMD), was performed using analytical nuclear technique. The aim of this work was to determine reference values of elements of clinical (Ca, Cl, K, Mg, Na) and nutritional (Br and S) relevance in whole blood, tibia, quadriceps and hearts from Dmdmdx/J (10 males and 10 females) dystrophic mice and C57BL/6J (10 males) control group mice, using Neutron Activation Analysis technique (NAA). To show in more details the alterations that this disease may cause in these biological tissues, correlations matrixes of the DMD{sup mdx}/J mouse strain were generated and compared with C57BL/6J control group. For this study 119 samples of biological tissue were irradiated in the IEA-R1 nuclear reactor at IPEN (Sao Paulo, Brazil). The concentrations of these elements in biological tissues of Dmd{sup mdx}/J and C57B/6J mice are the first indicative interval for reference values. Moreover, the alteration in some correlation coefficients data among the elements in the health status and in the diseased status indicates a connection between these elements in whole blood, tibia, quadriceps and heart. These results may help the researchers to evaluate the efficiency of new treatments and to compare the advantages of different treatment approaches before performing tests in patients with muscular dystrophy. (author)

  7. Feasibility study on the investigation of age-dependent effects of high-fre quency electromagnetic fields based on relevant biophysical and biological parameters. Final report

    International Nuclear Information System (INIS)

    Based on a comprehensive literature study on the potential health hazard for children due to high frequency electromagnetic fields compared to adults the actual status of scientific knowledge is compiled and documented. The analysis of the available scientific literature can neither divert nor confirm indications on age dependent effects of electromagnetic fields. Concerning dosimetry the open questions result mainly from the missing representative detailed anatomic body or head models for children and missing data on possible age dependent dielectric tissue properties. There is also missing information on the maximum transmission power fluctuation range and the maximum antenna current close to the head of children using the mobile telephone which is dependent on the telephone type. The dosimetry related open questions can be defined and categorized, - the questions concerning the biological effects are more complicated, since up to now no assured low-dose mechanism is available. The so far published papers are controversial and were performed mostly with small animals and whole-body exposure. Due to the multitude of open questions concerning doses and biological effects it is not yet clear whether the health hazards for children due to HF fields are higher compared to adults or not. The study recommends the main research fields to be treated in the next future

  8. On mono-W signatures in spin-1 simplified models

    Science.gov (United States)

    Haisch, Ulrich; Kahlhoefer, Felix; Tait, Tim M. P.

    2016-09-01

    The potential sensitivity to isospin-breaking effects makes LHC searches for mono-W signatures promising probes of the coupling structure between the Standard Model and dark matter. It has been shown, however, that the strong sensitivity of the mono-W channel to the relative magnitude and sign of the up-type and down-type quark couplings to dark matter is an artifact of unitarity violation. We provide three different solutions to this mono-W problem in the context of spin-1 simplified models and briefly discuss the impact that our findings have on the prospects of mono-W searches at future LHC runs.

  9. Relevant Agents

    Czech Academy of Sciences Publication Activity Database

    Bílková, Marta; Majer, Ondrej; Peliš, Michal; Restall, G.

    London: College Publications, 2010 - (Beklemishev, L.; Goranko, V.; Shehtman, V.), s. 22-38. (8). ISBN 978-1-84890-013-4. [Advances in Modal Logic. Moscow (RU), 24.08.2010-27.08.2010] R&D Projects: GA ČR GEICC/08/E018; GA AV ČR IAA900090703 Institutional research plan: CEZ:AV0Z10300504; CEZ:AV0Z90090514 Keywords : modal logic * epistemic logic * relevant logic * substructural logic * frame semantics Subject RIV: BA - General Mathematics

  10. Solar ultraviolet radiation induces biological alterations in human skin in vitro: Relevance of a well-balanced UVA/UVB protection

    Directory of Open Access Journals (Sweden)

    Françoise Bernerd

    2012-01-01

    Full Text Available Cutaneous damages such as sunburn, pigmentation, and photoaging are known to be induced by acute as well as repetitive sun exposure. Not only for basic research, but also for the design of the most efficient photoprotection, it is crucial to understand and identify the early biological events occurring after ultraviolet (UV exposure. Reconstructed human skin models provide excellent and reliable in vitro tools to study the UV-induced alterations of the different skin cell types, keratinocytes, fibroblasts, and melanocytes in a dose- and time-dependent manner. Using different in vitro human skin models, the effects of UV light (UVB and UVA were investigated. UVB-induced damages are essentially epidermal, with the typical sunburn cells and DNA lesions, whereas UVA radiation-induced damages are mostly located within the dermal compartment. Pigmentation can also be obtained after solar simulated radiation exposure of pigmented reconstructed skin model. Those models are also highly adequate to assess the potential of sunscreens to protect the skin from UV-associated damage, sunburn reaction, photoaging, and pigmentation. The results showed that an effective photoprotection is provided by broad-spectrum sunscreens with a potent absorption in both UVB and UVA ranges.

  11. Insight into the structural and biological relevance of the T/R transition of the N-terminus of the B-chain in human insulin.

    Science.gov (United States)

    Kosinová, Lucie; Veverka, Václav; Novotná, Pavlína; Collinsová, Michaela; Urbanová, Marie; Moody, Nicholas R; Turkenburg, Johan P; Jiráček, Jiří; Brzozowski, Andrzej M; Žáková, Lenka

    2014-06-01

    The N-terminus of the B-chain of insulin may adopt two alternative conformations designated as the T- and R-states. Despite the recent structural insight into insulin-insulin receptor (IR) complexes, the physiological relevance of the T/R transition is still unclear. Hence, this study focused on the rational design, synthesis, and characterization of human insulin analogues structurally locked in expected R- or T-states. Sites B3, B5, and B8, capable of affecting the conformation of the N-terminus of the B-chain, were subjects of rational substitutions with amino acids with specific allowed and disallowed dihedral φ and ψ main-chain angles. α-Aminoisobutyric acid was systematically incorporated into positions B3, B5, and B8 for stabilization of the R-state, and N-methylalanine and d-proline amino acids were introduced at position B8 for stabilization of the T-state. IR affinities of the analogues were compared and correlated with their T/R transition ability and analyzed against their crystal and nuclear magnetic resonance structures. Our data revealed that (i) the T-like state is indeed important for the folding efficiency of (pro)insulin, (ii) the R-state is most probably incompatible with an active form of insulin, (iii) the R-state cannot be induced or stabilized by a single substitution at a specific site, and (iv) the B1-B8 segment is capable of folding into a variety of low-affinity T-like states. Therefore, we conclude that the active conformation of the N-terminus of the B-chain must be different from the "classical" T-state and that a substantial flexibility of the B1-B8 segment, where GlyB8 plays a key role, is a crucial prerequisite for an efficient insulin-IR interaction. PMID:24819248

  12. A paradigm shift in EPH receptor interaction: biological relevance of EPHB6 interaction with EPHA2 and EPHB2 in breast carcinoma cell lines.

    Science.gov (United States)

    Fox, Brian P; Kandpal, Raj P

    2011-01-01

    EPH receptors are the largest known family of receptor tyrosine kinases characterized in humans. These proteins are involved in axon guidance, tissue organization, synaptic plasticity, vascular development and the progression of various diseases including cancer. The varied biological effects of EPH receptors are mediated in part by the expression of these proteins and their intracellular binding proteins. The ability of EPH molecules to form heterodimers within their own class has been suggested, although not exhaustively characterized. We have clarified this phenomenon by showing that EPHB6, a kinase-deficient receptor, can interact with EPHB2 in mammalian cells, and more significantly EPHB6 interacts with EPHA2. However, EPHB6 does not interact with another kinase-deficient receptor, EPHA10. The interaction between EPHB6 and EPHA2 is the first demonstration of an A-type receptor interacting with a B-type receptor. Furthermore, we correlated relative expression of EPHB6, EPHB2 and EPHA2 with non-invasive and invasive phenotypes of breast tumor cell lines. Our results indicate that tumor invasiveness-suppressing activity of EPHB6 is mediated by its ability to sequester other kinase-sufficient and oncogenic EPH receptors. These observations suggest that cellular phenotypes may, in part, be attributed to a combinatorial expression of EPH receptors and heteromeric interactions among the same class, as well as between two classes, of EPH receptors. Our results also suggest that EPHA10 may transduce signals by interacting with other kinase-sufficient receptors in a similar manner. PMID:21737611

  13. Viscoelasticity of mono- and polydisperse inverse ferrofluids.

    Science.gov (United States)

    Saldivar-Guerrero, Ruben; Richter, Reinhard; Rehberg, Ingo; Aksel, Nuri; Heymann, Lutz; Rodriguez-Fernández, Oliverio S

    2006-08-28

    We report on measurements of a magnetorheological model fluid created by dispersing nonmagnetic microparticles of polystyrene in a commercial ferrofluid. The linear viscoelastic properties as a function of magnetic field strength, particle size, and particle size distribution are studied by oscillatory measurements. We compare the results with a magnetostatic theory proposed by De Gans et al. [Phys. Rev. E 60, 4518 (1999)] for the case of gap spanning chains of particles. We observe these chain structures via a long distance microscope. For monodisperse particles we find good agreement of the measured storage modulus with theory, even for an extended range, where the linear magnetization law is no longer strictly valid. Moreover we compare for the first time results for mono- and polydisperse particles. For the latter, we observe an enhanced storage modulus in the linear regime of the magnetization. PMID:16965057

  14. Mono Lake's Radiocarbon Budget: An unsolved enigma

    Science.gov (United States)

    Broecker, Wallace; Stine, Scott

    Mono Lake occupies a semiarid basin just east of the central Sierra Nevada in California. During the past 4 decades, diversion of the lake's tributary streams by the Los Angeles Department of Water and Power (LADWP) has caused the lake to shrink dramatically. This shrinkage has concentrated the salts that occur naturally in the lake, forcing the salinity to rise toward levels that will cause the extinction of the resident brine shrimp and brine flies that provide food for many hundreds of thousands of migratory waterfowl. The lake is now the focus of a pitched battle between conservationists who want to curtail diversions before serious ecological consequences occur and the LADWP, whose responsibility is to supply the city with water.

  15. Discovery and industrial applications of lytic polysaccharide mono-oxygenases.

    Science.gov (United States)

    Johansen, Katja S

    2016-02-15

    The recent discovery of copper-dependent lytic polysaccharide mono-oxygenases (LPMOs) has opened up a vast area of research covering several fields of application. The biotech company Novozymes A/S holds patents on the use of these enzymes for the conversion of steam-pre-treated plant residues such as straw to free sugars. These patents predate the correct classification of LPMOs and the striking synergistic effect of fungal LPMOs when combined with canonical cellulases was discovered when fractions of fungal secretomes were evaluated in industrially relevant enzyme performance assays. Today, LPMOs are a central component in the Cellic CTec enzyme products which are used in several large-scale plants for the industrial production of lignocellulosic ethanol. LPMOs are characterized by an N-terminal histidine residue which, together with an internal histidine and a tyrosine residue, co-ordinates a single copper atom in a so-called histidine brace. The mechanism by which oxygen binds to the reduced copper atom has been reported and the general mechanism of copper-oxygen-mediated activation of carbon is being investigated in the light of these discoveries. LPMOs are widespread in both the fungal and the bacterial kingdoms, although the range of action of these enzymes remains to be elucidated. However, based on the high abundance of LPMOs expressed by microbes involved in the decomposition of organic matter, the importance of LPMOs in the natural carbon-cycle is predicted to be significant. In addition, it has been suggested that LPMOs play a role in the pathology of infectious diseases such as cholera and to thus be relevant in the field of medicine. PMID:26862199

  16. Transcriptional Profiling of a Cross-Protective Salmonella enterica serovar Typhimurium UK-1 dam Mutant Identifies a Set of Genes More Transcriptionally Active Compared to Wild-Type, and Stably Transcribed across Biologically Relevant Microenvironments

    Directory of Open Access Journals (Sweden)

    Claire B. Miller

    2014-05-01

    Full Text Available Vaccination with Salmonella enterica serovar Typhimurium lacking DNA adenine methyltransferase confers cross-protective immunity against multiple Salmonella serotypes. The mechanistic basis is thought to be associated with the de-repression of genes that are tightly regulated when transiting from one microenvironment to another. This de-repression provides a potential means for the production of a more highly expressed and stable antigenic repertoire capable of inducing cross-protective immune responses. To identify genes encoding proteins that may contribute to cross-protective immunity, we used a Salmonella Typhimurium DNA adenine methyltransferase mutant strain (UK-1 dam mutant derived from the parental UK-1 strain, and assessed the transcriptional profile of the UK-1 dam mutant and UK-1 strain grown under conditions that simulate the intestinal or endosomal microenvironments encountered during the infective process. As expected, the transcriptional profile of the UK-1 dam mutant identified a set of genes more transcriptionally active when compared directly to UK-1, and stably transcribed in biologically relevant culture conditions. Further, 22% of these genes were more highly transcribed in comparison to two other clinically-relevant Salmonella serovars. The strategy employed here helps to identify potentially conserved proteins produced by the UK-1 dam mutant that stimulate and/or modulate the development of cross-protective immune responses toward multiple Salmonella serotypes.

  17. MONO FOR CROSS-PLATFORM CONTROL SYSTEM ENVIRONMENT

    International Nuclear Information System (INIS)

    Mono is an independent implementation of the .NET Framework by Novell that runs on multiple operating systems (including Windows, Linux and Macintosh) and allows any .NET compatible application to run unmodified. For instance Mono can run programs with graphical user interfaces (GUI) developed with the C(numbersign) language on Windows with Visual Studio (a full port of WinForm for Mono is in progress). We present the results of tests we performed to evaluate the portability of our controls system .NET applications from MS Windows to Linux

  18. MONO FOR CROSS-PLATFORM CONTROL SYSTEM ENVIRONMENT

    Energy Technology Data Exchange (ETDEWEB)

    Nishimura, Hiroshi; Timossi, Chris

    2006-10-19

    Mono is an independent implementation of the .NET Frameworkby Novell that runs on multiple operating systems (including Windows,Linux and Macintosh) and allows any .NET compatible application to rununmodified. For instance Mono can run programs with graphical userinterfaces (GUI) developed with the C# language on Windows with VisualStudio (a full port of WinForm for Mono is in progress). We present theresults of tests we performed to evaluate the portability of our controlssystem .NET applications from MS Windows to Linux.

  19. Professional Android Programming with Mono for Android and NETC#

    CERN Document Server

    McClure, Wallace B; Croft, John J; Dick, Jonathan; Hardy, Chris

    2012-01-01

    A one-of-a-kind book on Android application development with Mono for Android The wait is over! For the millions of .NET/C# developers who have been eagerly awaiting the book that will guide them through the white-hot field of Android application programming, this is the book. As the first guide to focus on Mono for Android, this must-have resource dives into writing applications against Mono with C# and compiling executables that run on the Android family of devices. Putting the proven Wrox Professional format into practice, the authors provide you with the knowledge you need to become a succ

  20. Self-excited mono-ion oscillator.

    Science.gov (United States)

    Dehmelt, H; Nagourney, W; Sandberg, J

    1986-08-01

    We propose self-excitation as a potentially more sensitive technique for studying a mono-ion oscillator of frequency v(z) approximately 0.1-100 MHz. This technique also makes only low demands on the harmonicity of the ion oscillation. It should therefore work with inexpensive, easily constructed rf traps. In our analysis, the bound ion between the trap electrodes is represented by an effective circuit resembling that of a piezoelectric quartz crystal. The feedback circuit developed, when operated below self-excitation threshold, may also make efficient electronic cooling of the ion possible, particularly in conjunction with a heterodyne feedback scheme. In the super-regenerative mode, the apparatus might function as a powerful atomic amplifier of the ion oscillation for an energy as low as a fraction of hv(z). These techniques may prove especially useful in conjunction with attempts to synthesize in an rf trap a loosely bound anti-hydrogen atom from a positron and antiproton. PMID:16593742

  1. Validation of the prognostic Heidelberg re-irradiation score in an independent mono-institutional patient cohort

    OpenAIRE

    Niyazi, Maximilian; Flieger, Maya; Ganswindt, Ute; Combs, Stephanie E; Belka, Claus

    2014-01-01

    Purpose: Re-irradiation has been shown to be a valid option with proven efficacy for recurrent high-grade glioma patients. Overall, up to now it is unclear which patients might be optimal candidates for a second course of irradiation. A recently reported prognostic score developed by Combs et al. may guide treatment decisions and thus, our mono-institutional cohort served as validation set to test its relevance for clinical practice. Patients and methods: The prognostic score is built upon hi...

  2. Resistivity Imaging of the Mono-Inyo Volcanic Chain, Mono Basin, California Using the Audiomagnetotelluric Method

    Science.gov (United States)

    McPhee, D. K.; Ponce, D. A.; Pera McDonell, A.; Chuchel, B. A.

    2011-12-01

    Audiomagnetotelluric (AMT) models of data collected in Mono Basin, California show significant structure within the upper kilometer of the basin and image a shallow resistor that may be related to a shallow basement feature. The Mono-Inyo volcanic chain is a 25-km long, north-south trending series of domes and craters extending southward from Mono Lake and into the western part of the Long Valley Caldera. Gravity and magnetic modeling in the region, prompted by a volcano hazards study, show a basement high associated with an apparent circular magnetic anomaly. AMT data are used to further investigate this potential field anomaly and image the geoelectric structure within the volcanic rocks in Mono Basin. We collected AMT data along two profiles in Pumice Valley and along the western margin of the domes. Profile A runs approximately east-west, perpendicular to the regional geologic strike, and extends 2.5 km from the southern edge of North Coulee into the basin. Profile B is a north-south trending 6 km-long profile within the basin and was located several hundred meters away from the volcanic chain. Both profiles perpendicularly intersect the circular magnetic feature. We computed both one-dimensional and two-dimensional (2D) inverse models along each profile. 2D models were computed using the conjugate gradient, finite-difference method of Rodi and Mackie (2001) and a 100 ohm-m half-space, starting model. One-dimensional model sensitivity and various 2D starting models indicate a depth of investigation of about 1 km. Preliminary models show a relatively conductive (~20 ohm-m) volcanic basin fill likely associated with the Bishop Tuff, a voluminous pyroclastic flow, whose eruption resulted in formation of the Long Valley caldera 760 Ka ago. Resistivity variations within the basin fill may be related to the porosity or amount of fracturing of individual flows. A resistive (> 200 ohm-m) feature at roughly 600-800 m depth coincides with the magnetic high and relative

  3. Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo.

    Directory of Open Access Journals (Sweden)

    David Milford

    Full Text Available T2 relaxometry has become an important tool in quantitative MRI. Little focus has been put on the effect of the refocusing flip angle upon the offset parameter, which was introduced to account for a signal floor due to noise or to long T2 components. The aim of this study was to show that B1 imperfections contribute significantly to the offset. We further introduce a simple method to reduce the systematic error in T2 by discarding the first echo and using the offset fitting approach.Signal curves of T2 relaxometry were simulated based on extended phase graph theory and evaluated for 4 different methods (inclusion and exclusion of the first echo, while fitting with and without the offset. We further performed T2 relaxometry in a phantom at 9.4T magnetic resonance imaging scanner and used the same methods for post-processing as in the extended phase graph simulated data. Single spin echo sequences were used to determine the correct T2 time.The simulation data showed that the systematic error in T2 and the offset depends on the refocusing pulse, the echo spacing and the echo train length. The systematic error could be reduced by discarding the first echo. Further reduction of the systematic T2 error was reached by using the offset as fitting parameter. The phantom experiments confirmed these findings.The fitted offset parameter in T2 relaxometry is influenced by imperfect refocusing pulses. Using the offset as a fitting parameter and discarding the first echo is a fast and easy method to minimize the error in T2, particularly for low to intermediate echo train length.

  4. Electron attachment to biological relevant molecules

    International Nuclear Information System (INIS)

    Full text: The interaction of low energy electrons with compounds of DNA/RNA leading to negative ions gives insight into radiation damage processes in human cells. We demonstrate that electrons at sub excitation energies (- with X = T, C, U or G. This observation has significant consequences for the molecular picture of radiation damage, i.e. genotoxic effects or damage of living cells due to the secondary component of high energy radiation. The present experiment is performed in a crossed electron/neutral molecule beam arrangement. A highly monochromatized electron beam, generated by an electrostatic hemispherical electron monochromator, interacts with an effusive molecular beam of biomolecules. Negative ions are extracted from the collision region and focused into a quadrupole mass spectrometer, where they are mass analyzed and detected by single pulse counting electronics. In the present measurements the dominant negative ions formed via electron attachment (EA) reaction to T, C, U and G, are (T-H)-, (C-H)-, (U-H)- and (G-H)-. Using a simple calibration procedure, values for the respective partial EA cross section for (T-H)-, (C-H)-, (U-H)-, and (G-H)- could be determined yielding a peak value of σ (1.05 eV) = 1.2 x 10-19 m2, σ (1.54 eV) = 2.3 x 10-20 m2, σ (1.0 eV) = 3 x 10-20 m2, σ (1.3 eV) = 5 x 10-20 m2 , respectively. At higher electron energies, we observe further product anions, but at significantly lower cross sections. (author)

  5. Prion biology relevant to bovine spongiform encephalopathy.

    Science.gov (United States)

    Novakofski, J; Brewer, M S; Mateus-Pinilla, N; Killefer, J; McCusker, R H

    2005-06-01

    Bovine spongiform encephalopathy (BSE) and chronic wasting disease (CWD) of deer and elk are a threat to agriculture and natural resources, as well as a human health concern. Both diseases are transmissible spongiform encephalopathies (TSE), or prion diseases, caused by autocatalytic conversion of endogenously encoded prion protein (PrP) to an abnormal, neurotoxic conformation designated PrPsc. Most mammalian species are susceptible to TSE, which, despite a range of species-linked names, is caused by a single highly conserved protein, with no apparent normal function. In the simplest sense, TSE transmission can occur because PrPsc is resistant to both endogenous and environmental proteinases, although many details remain unclear. Questions about the transmission of TSE are central to practical issues such as livestock testing, access to international livestock markets, and wildlife management strategies, as well as intangible issues such as consumer confidence in the safety of the meat supply. The majority of BSE cases seem to have been transmitted by feed containing meat and bone meal from infected animals. In the United Kingdom, there was a dramatic decrease in BSE cases after neural tissue and, later, all ruminant tissues were banned from ruminant feed. However, probably because of heightened awareness and widespread testing, there is growing evidence that new variants of BSE are arising "spontaneously," suggesting ongoing surveillance will continue to find infected animals. Interspecies transmission is inefficient and depends on exposure, sequence homology, TSE donor strain, genetic polymorphism of the host, and architecture of the visceral nerves if exposure is by an oral route. Considering the low probability of interspecies transmission, the low efficiency of oral transmission, and the low prion levels in nonnervous tissues, consumption of conventional animal products represents minimal risk. However, detection of rare events is challenging, and TSE literature is characterized by subsequently unsupported claims of species barriers or absolute tissue safety. This review presents an overview of TSE and summarizes recent research on pathogenesis and transmission. PMID:15890824

  6. Bipolar spectrum: Relevant psychological and biological factors

    OpenAIRE

    Terao, Takeshi

    2012-01-01

    The bipolar spectrum is a concept which bridges bipolar I disorder and unipolar depression. As Kraepelin described, there may be continuity across mood disorders. If this is the case, why should we discriminate for drug choice For example, it is generally accepted that mood stabilizers should be used for the bipolar spectrum, whereas antidepressants are for unipolar depression. If these disorders are diagnostically continuous, it is possible that the same drug could be effective in treating b...

  7. Greater Sage-grouse Telemetry - Mono Co. [ds68

    Data.gov (United States)

    California Department of Resources — Combined telemetry locations for sage grouse in Mono County which were fitted with radio-transmitters for the USGS Greater sage-grouse project. Contains spatial and...

  8. Searches for mono-jets and mono-photons with the ATLAS detector

    International Nuclear Information System (INIS)

    Studies of events with a single high energy jet or photon, and large missing transverse momentum at the Large Hadron Collider is one of the most effective ways to search for physics beyond the Standard Model. The background from the Standard Model processes is dominated by jet/photon production associated with Z or W bosons undergoing leptonic decays to neutrinos and/or unidentified electrons or muons. The sensitivity to new physics signals relies on the good understanding and the accurate estimation of these backgrounds, and therefore the use of data-driven techniques is often required. In this article, I will present a compilation of the latest results from the mono-jet and mono-photon searches based on the analysis of the 2011 and 2012 proton-proton collision data collected with the ATLAS detector at a center-of-mass energy of 7 TeV and 8 TeV, respectively. The results are interpreted in the context of various models beyond the Standard Model including large extra dimensions, gauge mediated supersymmetry breaking and effective field theory of dark matter production. (authors)

  9. New mono-organotin (IV) dithiocarbamate complexes

    International Nuclear Information System (INIS)

    Eighteen new mono-organotin dithiocarbamate compounds derived each nine from methyltin(IV) and phenyltin(IV) reacted using in-situ method with various type of N-dialkylamine together with carbon disulphide with the ratio of 1:3:3. Elemental and gravimetric analysis showed that the general formula of these compounds were RSnCl[S2CNR′R″]2 (R= Ph, CH3, R′ = CH3, C2H5, C7H7 and R″ = C2H5, C6H11, iC3H7, C7H7). These compounds had been characterized by infrared spectroscopy, ultraviolet spectroscopy, 1H, 13C NMR spectroscopy and single crystal X-ray crystallography. The infrared spectra of these compounds showed three important peaks indicating the formation of dithiocarbamate compounds, ν(CN), ν(CS) and ν(Sn-S) band which present in the region of 1444–1519, 954–1098 and 318–349 cm−1 respectively. The ultraviolet-visible spectra showed an absorption band for the π - π* transition of NCS group in the range of 253 – 259 nm due to the intramolecular charge transfer of the ligand. The 13C NMR spectra showed an important shift for δ(N13CS2) in the range of 196.8 – 201.9 ppm.. Single crystal X-ray diffraction studies showed three new structures with the general formula of PhSnCl[S2CN(Et)(i−Pr)]2, MeSnCl[S2CN(Me)(Cy)]2 and MeSnCl[S2CN(i−Pr)(CH2Ph)]2. All structures having a distorted octahedral geometry set by CClS4 donor atom from the two chelating dithiocarbamate ligands

  10. Sequential Elution from IMAC (SIMAC): An Efficient Method for Enrichment and Separation of Mono- and Multi-phosphorylated Peptides.

    Science.gov (United States)

    Thingholm, Tine E; Larsen, Martin R

    2016-01-01

    Phosphoproteomics relies on methods for efficient purification and sequencing of phosphopeptides from highly complex biological systems, especially when using low amounts of starting material. Current methods for phosphopeptide enrichment, e.g., Immobilized Metal ion Affinity Chromatography and titanium dioxide chromatography provide varying degrees of selectivity and specificity for phosphopeptide enrichment. The number of multi-phosphorylated peptides identified in most published studies is rather low. Here we describe a protocol for a strategy that separates mono-phosphorylated peptides from multiply phosphorylated peptides using Sequential elution from Immobilized Metal ion Affinity Chromatography. The method relies on the initial enrichment and separation of mono- and multi-phosphorylated peptides using Immobilized Metal ion Affinity Chromatography and a subsequent enrichment of the mono-phosphorylated peptides using titanium dioxide chromatography. The two separate phosphopeptide fractions are then subsequently analyzed by mass spectrometric methods optimized for mono-phosphorylated and multi-phosphorylated peptides, respectively, resulting in improved identification of especially multi-phosphorylated peptides from a minimum amount of starting material. PMID:26584924

  11. New mono-organotin (IV) dithiocarbamate complexes

    Energy Technology Data Exchange (ETDEWEB)

    Muthalib, Amirah Faizah Abdul; Baba, Ibrahim [School of Chemical Sciences and Food Technology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 Bangi (Malaysia)

    2014-09-03

    Eighteen new mono-organotin dithiocarbamate compounds derived each nine from methyltin(IV) and phenyltin(IV) reacted using in-situ method with various type of N-dialkylamine together with carbon disulphide with the ratio of 1:3:3. Elemental and gravimetric analysis showed that the general formula of these compounds were RSnCl[S{sub 2}CNR′R″]{sub 2} (R= Ph, CH{sub 3}, R′ = CH{sub 3}, C{sub 2}H{sub 5}, C{sub 7}H{sub 7} and R″ = C{sub 2}H{sub 5}, C{sub 6}H{sub 11}, iC{sub 3}H{sub 7}, C{sub 7}H{sub 7}). These compounds had been characterized by infrared spectroscopy, ultraviolet spectroscopy, {sup 1}H, {sup 13}C NMR spectroscopy and single crystal X-ray crystallography. The infrared spectra of these compounds showed three important peaks indicating the formation of dithiocarbamate compounds, ν(CN), ν(CS) and ν(Sn-S) band which present in the region of 1444–1519, 954–1098 and 318–349 cm{sup −1} respectively. The ultraviolet-visible spectra showed an absorption band for the π - π* transition of NCS group in the range of 253 – 259 nm due to the intramolecular charge transfer of the ligand. The {sup 13}C NMR spectra showed an important shift for δ(N{sup 13}CS{sub 2}) in the range of 196.8 – 201.9 ppm.. Single crystal X-ray diffraction studies showed three new structures with the general formula of PhSnCl[S{sub 2}CN(Et)(i−Pr)]{sub 2}, MeSnCl[S{sub 2}CN(Me)(Cy)]{sub 2} and MeSnCl[S{sub 2}CN(i−Pr)(CH{sub 2}Ph)]{sub 2}. All structures having a distorted octahedral geometry set by CClS{sub 4} donor atom from the two

  12. Sorption of mono ethanol amine and mono ethanol aminate of copper(II) and cadmium(II) on hydrated zirconium dioxide

    International Nuclear Information System (INIS)

    The sorption of mono ethanol amine and mono ethanol aminate of copper(II) and cadmium(II) on hydrated zirconium dioxide is studied. Influence of ph of equilibrium solution, nature of central cation and outer-sphere anion on sorption of mono ethanol amine on hydrated zirconium dioxide is considered.

  13. Pairing preferences of the model mono-valence mono-atomic ions investigated by molecular simulation

    International Nuclear Information System (INIS)

    We carried out a series of potential of mean force calculations to study the pairing preferences of a series of model mono-atomic 1:1 ions with evenly varied sizes. The probabilities of forming the contact ion pair (CIP) and the single water separate ion pair (SIP) were presented in the two-dimensional plots with respect to the ion sizes. The pairing preferences reflected in these plots largely agree with the empirical rule of matching ion sizes in the small and big size regions. In the region that the ion sizes are close to the size of the water molecule; however, a significant deviation from this conventional rule is observed. Our further analysis indicated that this deviation originates from the competition between CIP and the water bridging SIP state. The competition is mainly an enthalpy modulated phenomenon in which the existing of the water bridging plays a significant role

  14. Mono-Higgs signature in fermionic dark matter model

    CERN Document Server

    Ghorbani, Karim

    2016-01-01

    In light of Higgs boson discovery, we explore mono-Higgs signature in association with dark matter pair production at the LHC. For two channels with $\\gamma\\gamma+\\text{MET}$ and $b \\bar b+\\text{MET}$ in the final state we simulate the SM backgrounds and signal events at $\\sqrt{s} = 14$ TeV. We then estimate the LHC sensitivities for various benchmark points for two integrated luminosities ${\\cal L} = 300~\\text{fb}^{-1}$ and ${\\cal L} = 3~ \\text{ab}^{-1}$. We constrain the Yukawa coupling of the dark matter-SM interaction, taking into account bounds from mono-Higgs signature, observed dark matter relic density, Higgs physics and perturbativity requirement. Concerning the mono-Higgs search, it turns out that the channel with the largest branching ratio, $b \\bar b$ channel, provides better sensitivity.

  15. Radioimmunoassay for mono-(2-ethylhexyl) phthalate in unextracted plasma

    International Nuclear Information System (INIS)

    We report a radioimmunoassay for mono-(2-ethylhexyl) phthalate that has been coupled to a protein carrier as a radioligand. Competitive interference tests with a variety of related compounds indicated the assay to be highly specific. Quantitative comparison of mono-(2-ethylhexyl) phthalate values in plasma and serum samples between the radioimmunoassay and gas chromatographic procedures indicated a high reliability. Because this potentially toxic compound can leach into plasma from polyvinyl plastics, this assay should be particularly useful for those involved in the manufacture or use of medical devices made of them

  16. Synthesis and spectroscopic study of nitroxide mono- and bi- radicals

    International Nuclear Information System (INIS)

    Synthesis and study of nitroxide mono- and bi- radicals derived from oxazolidine: - The first part is the synthesis of amines and radicals, and the I.R. U.V., E.P.R. spectroscopy study. - Conformational analysis of two biradicals has been carried out by measurement of dipolar interaction, on the E.P.R. spectra in the second part. - The final part is an application of N.M.R. study to the determination of the sign and magnitude of nuclear-electron spin-spin couplings and conformations analysis in five mono-radicals. (author)

  17. [Immediately loaded MonoType implants in the edentulous mandible].

    Science.gov (United States)

    Gfeller, F; Zitzmann, N U; Lambrecht, J Thomas

    2011-01-01

    Results of immediately loaded implants are presented. 34 patients with 136 interforaminal MonoType implants (Straumann,Basel, Switzerland) were included in the study. The bar retention was manufactured fter the operation, inserted and covered with a hybrid prosthesis. 28 patients showed up for the follow-up study, the average time range was three years. Five implants were rated as failures, the cumulative six-year success rate being 94%. Interforaminal immediately loaded MonoType implants in edentulous patients showed very good results, comparable to similar studies with different systems. PMID:21560796

  18. Mono- and binuclear complexes of low-valent zirconium

    OpenAIRE

    Wielstra, IJtsen

    1990-01-01

    This thesis is a study on the synthesis and reactivity of low-valent zirconium. The investigation can be divided in two parts: the first describes the chemistry of mono-cyclopentadienyl Zr (II) complexes (Chapter II, III and IV), and the second describes some synthetic pathways successfully used for the preparation of metallocenic and related type Zr (II) complexes. (Chapter V and VI).

  19. Mono: .NET für alle Plattformen

    OpenAIRE

    Anders, Jörg; Hübner, Uwe

    2004-01-01

    Mono ist eine Open-Source-Implementierung der Software-Entwicklungsplattform .NET. Ein wesentliches Anwendungsgebiet ist die Realisierung von Web-Services. Nach einfachen Beispielen für Web-Services und dazugehörigen Klienten wird ein anspruchsvolleres Beispiel "Kranfernsteuerung" vorgestellt.

  20. Risperidone Mono - Therapy as Prophylaxis in Bipolar Affective Disorders

    OpenAIRE

    Trivedi, Mohit; Pinto, Denzil; Safeekh, A.T.

    2004-01-01

    Risperidone has been found to be useful in the treatment of acute bipolar disorders. This is a case report where risperidone mono therapy has been found to be effective in prophylaxis of bipolar affective disorder. The pharmacological and clinical implications of risperidone in the management of BPAD are discussed

  1. Bepaling van dapson, mono- en diacetyldapson in runderbloedplasma

    OpenAIRE

    Reuver, de, J.L.; Aerts, M.M.L.; Kuiper, H.A.

    1985-01-01

    Doel van dit onderzoek is: het testen van de bepalingsmetheden voor dapson, mono- en diacetyldapson in bloedplasma van melkgevende runderen en het vaststellen van het kinetisch profiel van genoemde stoffen na orale en intramusculaire toediening. Tevens wordt deglucuronidering en eiwitbinding onderzocht.

  2. Reliability Analysis of a Mono-Tower Platform

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Enevoldsen, I.; Sørensen, John Dalsgaard;

    In this paper a reliability analysis of a Mono-tower platform is presented. The failure modes, considered, are yelding in the tube cross-sections, and fatigue failure in the butt welds. The fatigue failure mode is investigated with a fatigue model, where the fatigue strength is expressed through SN...

  3. Reliability Analysis of a Mono-Tower Platform

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Enevoldsen, I.; Sørensen, John Dalsgaard;

    1990-01-01

    In this paper, a reliability analysis of a Mono-tower platform is presented. Te failure modes considered are yielding in the tube cross sections and fatigue failure in the butts welds. The fatigue failrue mode is investigated with a fatigue model, where the fatigue strength is expressed through SN...

  4. Cost-Effective Mass Production of Mono Bucket Foundations

    DEFF Research Database (Denmark)

    Gres, Szymon; Nielsen, Søren Andreas; Fejerskov, Morten;

    2015-01-01

    for innovative and cost-effective design of Mono Bucket foundations. Established approach merges wind and wave load models, soil/structure interaction topics, structural optimization and installation/fabrication aspects, into software package with ability to perform optimal design of the individual foundations...

  5. Geophysical studies of Mono Lake, east-central California

    Science.gov (United States)

    Athens, N. D.; Ponce, D. A.

    2012-12-01

    Magnetic and gravity investigations were undertaken in Mono Lake, California to study regional crustal structures and to aid understanding the geologic framework of Mono Lake, in particular regarding potential geothermal resources and volcanic hazards throughout Mono Basin. Recent geophysical surveys included over 600 line-kilometers of high-resolution ship-borne magnetometer data that augmented existing airborne data, 22 line-kilometers of ground magnetic data that were collected along six traverses across Paoha Island, 56 gravity stations that were collected on Paoha and Negit Islands, and 28 rock samples that were collected for physical property data. Magnetic highs in the study area occur to the east and west of Mono Lake, where pre-Tertiary basement is exposed. Magnetic data indicate that Mono Lake itself is dominated by three prominent magnetic anomalies that are from west to east: a magnetic high along the northwest part of the lake associated with the moderately magnetic basalt cinder cone at Black Point, a magnetic high associated with the young volcanic centers at Paoha and Negit Islands, and a broad magnetic high along the eastern margin of the lake probably associated with moderately magnetic granitic basement rocks at depth. Because volcanic rocks exposed at the surface of Paoha and Negit Islands are only weakly magnetic, magnetic data suggest that more mafic volcanic rocks probably occur at depth and are the source of the anomaly. The linear and steep magnetic gradient across the eastern part of the lake may reflect a fault. A fault may also be imaged in the northeastern part of the lake, where a possible laterally offset magnetic anomaly may be present. Within Mono Lake, gravity station control is poor because land-based gravity stations are limited to Paoha and Negit Islands. The gravity low in the basin reflects a moderately deep sedimentary basin filled with low density lacustrine and volcanic deposits. Isostatic gravity data indicate the central

  6. Quaternary Eruptions of the Mono-Inyo Craters, California

    Science.gov (United States)

    Bursik, M. I.; Pouget, S.; Mangan, M.; Marcaida, M.; Vazquez, J. A.

    2013-12-01

    The eruptive products of the Mono-Inyo Craters volcanic chain include the tephra and associated volcanic rocks of Black Point, islands of Mono Lake, Mono Craters, Inyo Craters, late eruptions of Mammoth Mountain and Red Cones. Most of the eruptions were explosive, and generated numerous pyroclastic flows, surges and falls as well as the prominent domes and lava flows that now cover vents. The eruptions range in age from several hundred years to at least 60,000 yr BP. The Mono-Inyo tephras are dispersed throughout the Sierra Nevada and Basin and Range, providing key time-stratigraphic marker layers. Recent work has not only resulted in high-precision radiometric dating of many of the tephras, but also detailed geochemical data that for the first time provides fingerprinting sufficiently precise to discriminate among the tephras. Lithostratigraphy of many of the layers is herein described for the first time, based on careful sampling and description in the field, and laboratory grain size, grain shape and componentry analyses of the late Pleistocene tephras of the Wilson Creek Formation. Most of the Wilson Creek volcanic layers are fall deposits accumulated within paleolake Russell, which were generated by eruptions of variable intensity and influenced by paleowinds of different orientation. Prevailing winds were generally to the North and East, but often the Pleistocene layers less than 25 ka were dispersed to the West. Many of the fall layers show evidence of wave reworking, generally near the top, although in some cases it is pervasive. Only near the vent do some layers of apparent debris flow origin occur. Maximum pumice sizes range up to nearly 3 cm, and lithics range up to 1 cm in the rhyolitic fall beds, while thicknesses range up to c. 30 cm. These data are consistent with relatively low volume, subplinian style eruptive behavior for most of the life of the Mono-Inyo Craters.

  7. 基于相关向量机的赖氨酸反应过程参数软测量%Soft Sensor of Lysien Fermentation Biological Parameters Based on Relevance Vector Machine

    Institute of Scientific and Technical Information of China (English)

    嵇小辅; 张孟尧; 王博; 黄丽

    2013-01-01

    针对支持向量机(SVM)计算复杂度高、参数不容易确定等局限性,提出一种基于相关向量机(RVM)的赖氨酸反应过程关键参量的软测量方法.根据过程经验,确定发酵液的溶解氧浓度、pH值、二氧化碳释放率、氧吸收率和葡萄糖流加速率为辅助变量,利用相关支持向量机的拟合与泛化能力,建立了赖氨酸反应过程基质浓度、菌体浓度、产物浓度等不可直接测量参量的软测量模型.基于L-赖氨酸反应过程开展的试验研究表明:所建立的相关向量机软测量模型拟合精度高、泛化能力强,较好地满足了赖氨酸反应过程的控制要求.%To overcome the high computational complexity and difficulty in design kernel parameters of support vector machine, the soft sensor model of lysien fermentation biological parameters is proposed based on relevance vector machine. According to procedure experience, dissolved oxygen, the parameters of pH value, discharge rate of CO2, absorption rate of O2, and flow acceleration rate of glucose are chosen as auxiliary variables, and the concentration of matrix, thallus and product are chosen as primary variables. The soft sensor of lysien fermentation procedure is built using the fitting and generalization capacity. The experiments results show that the obtained soft sensor is with high fitting precision and generalization capacity, which well satisfies the control requirement of lysien fermentation procedure.

  8. Aggregation of manufactured nanoparticles in aqueous solutions of mono- and bivalent electrolytes

    Energy Technology Data Exchange (ETDEWEB)

    Godymchuk, Anna, E-mail: godymchuk@tpu.ru; Karepina, Elizaveta; Yunda, Elena; Bozhko, Irina; Lyamina, Galina [National Research Tomsk Polytechnic University (Russian Federation); Kuznetsov, Denis; Gusev, Alexander [National University of Science and Technology “MISIS” (Russian Federation); Kosova, Natalia [National Research Tomsk State University (Russian Federation)

    2015-05-15

    The study of biological activity of manufactured nanopowders lacks experimental data concerning the influence of electrolyte nature and content on the degree of nanoparticles aggregation in aqueous suspensions. Using the dynamic light scattering technique, it has been shown how the ionic strength (0.0001…100 mM) of mono- and bivalent electrolyte (Na{sup +}, Ca{sup 2+}) solutions influences the size and zeta-potential of Al (90 nm) and Al{sub 2}O{sub 3} (30 nm) nanoparticles. It has been determined that the aggregative effect of counterions decreases when their charge increases. The weaker influence of Ca{sup 2+} concentration on the aggregation of both nanoparticles has been demonstrated. For Al{sub 2}O{sub 3} nanoparticles, the stronger influence of Na{sup +} concentration on the size and charge of aggregates has been observed.

  9. Aggregation of manufactured nanoparticles in aqueous solutions of mono- and bivalent electrolytes

    International Nuclear Information System (INIS)

    The study of biological activity of manufactured nanopowders lacks experimental data concerning the influence of electrolyte nature and content on the degree of nanoparticles aggregation in aqueous suspensions. Using the dynamic light scattering technique, it has been shown how the ionic strength (0.0001…100 mM) of mono- and bivalent electrolyte (Na+, Ca2+) solutions influences the size and zeta-potential of Al (90 nm) and Al2O3 (30 nm) nanoparticles. It has been determined that the aggregative effect of counterions decreases when their charge increases. The weaker influence of Ca2+ concentration on the aggregation of both nanoparticles has been demonstrated. For Al2O3 nanoparticles, the stronger influence of Na+ concentration on the size and charge of aggregates has been observed

  10. Why relevance theory is relevant for lexicography

    DEFF Research Database (Denmark)

    Bothma, Theo; Tarp, Sven

    2014-01-01

    a new dictionary project, identifying new tasks and responsibilities of the modern lexicographer. The article furthermore discusses how relevance theory impacts on teaching dictionary culture and reference skills. By integrating insights from lexicography and information science, the article...

  11. Mono Lake Analog Mars Sample Return Expedition for AMASE

    Science.gov (United States)

    Conrad, P. G.; Steele, A.; Younse, P.; DiCicco, M.; Morgan, A. R.; Backes, P.; Eigenbrode, J. E.; Marquardt, D.; Amundsen, H. E. F.

    2011-01-01

    We explored the performance of one robotic prototype for sample acquisition and caching of martian materials that has been developed at the Jet Propulsion Laboratory for potential use in the proposed MAX-C Mars Sample Return architecture in an environment, rich in chemical diversity with a variety of mineralogical textures. Mono Lake State Tufa Reserve in Mono County, CA possesses a variety of minerals including a variety of evaporites, volcanic glass and lava, and sand and mudstones. The lake itself is an interesting chemical system: the water is highly alkaline (pH is approximately 10) and contains concentrations of Cl, K, B, with lesser amounts of S Ca Mg, F, As, Li, I and Wand generally enriched HREEs. There are also traces of radioactive elements U, Th, Pl.

  12. Studies of mono-crystalline CVD diamond pixel detectors

    Science.gov (United States)

    Bugg, W.; Hollingsworth, M.; Spanier, S.; Yang, Z.; Bartz, E.; Doroshenko, J.; Hits, D.; Schnetzer, S.; Stone, R.; Atramentov, O.; Patel, R.; Barker, A.; Hall-Wilton, R.; Ryjov, V.; Farrow, C.; Pernicka, M.; Steininger, H.; Johns, W.; Halyo, V.; Harrop, B.; Hunt, A.; Marlow, D.; Hebda, P.

    2011-09-01

    The Pixel Luminosity Telescope (PLT) is a dedicated luminosity monitor, presently under construction, for the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC). It measures the particle flux in several three layered pixel diamond detectors that are aligned precisely with respect to each other and the beam direction. At a lower rate it also performs particle track position measurements. The PLT's mono-crystalline CVD diamonds are bump-bonded to the same readout chip used in the silicon pixel system in CMS. Mono-crystalline diamond detectors have many attributes that make them desirable for use in charged particle tracking in radiation hostile environments such as the LHC. In order to further characterize the applicability of diamond technology to charged particle tracking we performed several tests with particle beams that included a measurement of the intrinsic spatial resolution with a high resolution beam telescope.

  13. Studies of mono-crystalline CVD diamond pixel detectors

    CERN Document Server

    Bartz, E; Atramentov, O; Yang, Z; Hall-Wilton, R; Schnetzer, S; Patel, R; Bugg, W; Hebda, P; Halyo, V; Hunt, A; Marlow, D; Steininger, H; Ryjov, V; Hits, D; Spanier, S; Pernicka, M; Johns, W; Doroshenko, J; Hollingsworth, M; Harrop, B; Farrow, C; Stone, R

    2011-01-01

    The Pixel Luminosity Telescope (PLT) is a dedicated luminosity monitor, presently under construction, for the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC). It measures the particle flux in several three layered pixel diamond detectors that are aligned precisely with respect to each other and the beam direction. At a lower rate it also performs particle track position measurements. The PLTs mono-crystalline CVD diamonds are bump-bonded to the same readout chip used in the silicon pixel system in CMS. Mono-crystalline diamond detectors have many attributes that make them desirable for use in charged particle tracking in radiation hostile environments such as the LHC. In order to further characterize the applicability of diamond technology to charged particle tracking we performed several tests with particle beams that included a measurement of the intrinsic spatial resolution with a high resolution beam telescope. Published by Elsevier B.V.

  14. Electrical properties mono- and polycrystalline silicon solar cells

    OpenAIRE

    L.A. Dobrzański; M. Szczęsna; M. Szindler; A. Drygała

    2013-01-01

    Purpose: The goal of this article was to compare the properties of mono- and polycrystalline silicon solar cells. It was based on measurements performed of current-voltage characteristics and calculated parameters using mathematical formulas. Design/methodology/approach: Light and dark current-voltage characteristics of solar cells were measured using a solar simulator PV Test Solutions company SS150AAA model. The measurements were performed under standard conditions (Pin =...

  15. Synthesis of Mono-and Di-fluorinated Benzimidazoles

    Institute of Scientific and Technical Information of China (English)

    Liang Wu; Liu Gang

    2011-01-01

    Three efficient methods to synthesize mono-and di-fluofinated benzimidazoles are reported. These methods provide 5-amino-6-fluoro-benzimidazoles (5), 5,7-difluoro-benzimidazoles (10), and 6-fluoro-benzimidazoles (13) starting from commercially available 1,5-difluoro-2,4-dinitrobenzene (DFDNB), 2,3,4,5-tetrafluoro-6-nitrobenzoic acid (TFNBA), and 2,4-difluoro-l-aitrobenzene (DFNB), respectively.

  16. Gamma spectra pictures using a digital plotter. Program MONO

    International Nuclear Information System (INIS)

    The program MONO has been written for a CALCOMP-936 digital plotter operating off- -line with a UMI VAC 1106 computer, to obtain graphic representations of single gamma spectra stored on magnetic tape. It allows to plot the whole spectrum or only a part, as well as to draw a given spectrum on the same or different picture than the previous one. Ten representation scales are available and at up nine comment lines can be written in a graphic. (Author) 4 refs

  17. Volcanic Geology of Negit Island, Mono Lake, CA

    Science.gov (United States)

    Bursik, M.; Kobs, S.; Jayko, A.

    2008-12-01

    Negit Island, located in Mono Lake, eastern California, is a dacitic cumulodome with seven distinct lava flows emanating from at least four separate vent areas. Vent areas are dominated by en echelon northeast-trending fissures, indicating strong tectonic control. Neptunian(?) pyroclastic deposits on the north end of the island indicate an explosive subaqueous eruption early in island history. Northwestern shorelands, as well as a former landbridge to the island, retain a localized cap of rotated Pleistocene lake bottom sediment blocks, suggesting that proto-Negit was similar to modern Paoha Island, a nearby young structural dome draped with rotated lake bed blocks and explosive ejecta. In analogy with Paoha, the pyroclastic ejecta and blocks may thus indicate sublacustrine block landsliding with attendant eruption as an initial magmatic-structural dome grew, on which later lava domes and flows were superposed. What may be the oldest lava flow, in the center-west, is overlain by a deep orange-red soil, and three Mono Craters tephras. The well-developed soil indicates an extended period of chemical weathering before overlying tephra deposition. The southwestern end of the island is dominated by young lava flows and a prominent dome, which are not overlain by the most recent North Mono Craters tephra of 1350 A.D., consistent with earlier work indicating that parts of the island are younger than any eruption of the Mono Craters. The history of early structural doming with little or minimal eruptive activity at both Negit and Paoha Islands may have important implications for the current episode of noneruptive unrest and doming at nearby Long Valley caldera.

  18. Mono-jet Signatures of Gluphilic Scalar Dark Matter

    OpenAIRE

    Godbole, Rohini M.(Centre for High Energy Physics, Indian Institute of Science, 560012, Bangalore, India); Mendiratta, Gaurav(Center for High Energy Physics, Indian Institute of Science, Bangalore, 560012, India); Shivaji, Ambresh; Tait, Tim M. P.

    2016-01-01

    A gluphilic scalar dark matter (GSDM) model has recently been proposed as an interesting vision for WIMP dark matter communicating dominantly with the Standard Model via gluons. We discuss the collider signature of a hard jet recoiling against missing momentum ("mono-jet") in such a construction, whose leading contribution is at one-loop. We compare the full one-loop computation with an effective field theory (EFT) treatment, and find (as expected) that EFT does not accurately describe region...

  19. Modification and performance evaluation of a mono-valve engine

    Science.gov (United States)

    Behrens, Justin W.

    A four-stroke engine utilizing one tappet valve for both the intake and exhaust gas exchange processes has been built and evaluated. The engine operates under its own power, but has a reduced power capacity than the conventional 2-valve engine. The reduction in power is traced to higher than expected amounts of exhaust gases flowing back into the intake system. Design changes to the cylinder head will fix the back flow problems, but the future capacity of mono-valve engine technology cannot be estimated. The back flow of exhaust gases increases the exhaust gas recirculation (EGR) rate and deteriorates combustion. Intake pressure data shows the mono-valve engine requires an advanced intake valve closing (IVC) time to prevent back flow of charge air. A single actuation camshaft with advanced IVC was tested in the mono-valve engine, and was found to improve exhaust scavenging at TDC and nearly eliminated all charge air back flow at IVC. The optimum IVC timing is shown to be approximately 30 crank angle degrees after BDC. The mono-valve cylinder head utilizes a rotary valve positioned above the tappet valve. The open spaces inside the rotary valveand between the rotary valve and tappet valve represent a common volume that needs to be reduced in order to reduce the base EGR rate. Multiple rotary valve configurations were tested, and the size of the common volume was found to have no effect on back flow but a direct effect on the EGR rate and engine performance. The position of the rotary valve with respect to crank angle has a direct effect on the scavenging process. Optimum scavenging occurs when the intake port is opened just after TDC.

  20. Mono- versus polydrug abuse patterns among publicly funded clients

    Directory of Open Access Journals (Sweden)

    Relyea George

    2007-11-01

    Full Text Available Abstract To examine patterns of mono- versus polydrug abuse, data were obtained from intake records of 69,891 admissions to publicly funded treatment programs in Tennessee between 1998 and 2004. While descriptive statistics were employed to report frequency and patterns of mono- and polydrug abuse by demographic variables and by study years, bivariate logistic regression was applied to assess the probability of being a mono- or polydrug abuser for a number of demographic variables. The researchers found that during the study period 51.3% of admissions reported monodrug abuse and 48.7% reported polydrug abuse. Alcohol, cocaine, and marijuana were the most commonly abused substances, both alone and in combination. Odds ratio favored polydrug abuse for all but one drug category–other drugs. Gender did not affect drug abuse patterns; however, admissions for African Americans and those living in urban areas exhibited higher probabilities of polydrug abuse. Age group also appeared to affect drug abuse patterns, with higher odds of monodrug abuse among minors and adults over 45 years old. The discernable prevalence of polydrug abuse suggests a need for developing effective prevention strategies and treatment plans specific to polydrug abuse.

  1. Nongeocentric axial dipole field behavior during the Mono Lake excursion

    Science.gov (United States)

    Negrini, Robert M.; McCuan, Daniel T.; Horton, Robert A.; Lopez, James D.; Cassata, William S.; Channell, James E. T.; Verosub, Kenneth L.; Knott, Jeffrey R.; Coe, Robert S.; Liddicoat, Joseph C.; Lund, Steven P.; Benson, Larry V.; Sarna-Wojcicki, Andrei M.

    2014-04-01

    A new record of the Mono Lake excursion (MLE) is reported from the Summer Lake Basin of Oregon, USA. Sediment magnetic properties indicate magnetite as the magnetization carrier and imply suitability of the sediments as accurate recorders of the magnetic field including relative paleointensity (RPI) variations. The magnitudes and phases of the declination, inclination, and RPI components of the new record correlate well with other coeval but lower resolution records from western North America including records from the Wilson Creek Formation exposed around Mono Lake. The virtual geomagnetic pole (VGP) path of the new record is similar to that from another high-resolution record of the MLE from Ocean Drilling Program (ODP) Site 919 in the Irminger Basin between Iceland and Greenland but different from the VGP path for the Laschamp excursion (LE), including that found lower in the ODP-919 core. Thus, the prominent excursion recorded at Mono Lake, California, is not the LE but rather one that is several thousands of years younger. The MLE VGP path contains clusters, the locations of which coincide with nonaxial dipole features found in the Holocene geomagnetic field. The clusters are occupied in the same time progression by VGPs from Summer Lake and the Irminger Basin, but the phase of occupation is offset, a behavior that suggests time-transgressive decay and return of the principal field components at the beginning and end of the MLE, respectively, leaving the nonaxial dipole features associated with the clusters dominant during the excursion.

  2. Age of the Mono Lake excursion and associated tephra

    Science.gov (United States)

    Benson, Larry; Liddicoat, Joseph; Smoot, Joseph; Sarna-Wojcicki, Andrei; Negrini, Robert; Lund, Steve

    2003-02-01

    The Mono Lake excursion (MLE) is an important time marker that has been found in lake and marine sediments across much of the Northern Hemisphere. Dating of this event at its type locality, the Mono Basin of California, has yielded controversial results with the most recent effort concluding that the MLE may actually be the Laschamp excursion (Earth Planet. Sci. Lett. 197 (2002) 151). We show that a volcanic tephra (Ash ♯15) that occurs near the midpoint of the MLE has a date (not corrected for reservoir effect) of 28,620±300 14C yr BP (˜32,400 GISP2 yr BP) in the Pyramid Lake Basin of Nevada. Given the location of Ash ♯15 and the duration of the MLE in the Mono Basin, the event occurred between 31,500 and 33,300 GISP2 yr BP, an age range consistent with the position and age of the uppermost of two paleointensity minima in the NAPIS-75 stack that has been associated with the MLE (Philos. Trans. R. Soc. London Ser. A 358 (2000) 1009). The lower paleointensity minimum in the NAPIS-75 stack is considered to be the Laschamp excursion (Philos. Trans. R. Soc. London Ser. A 358 (2000) 1009).

  3. Integrated Design of Antibodies for Systems Biology Using Ab Designer

    OpenAIRE

    Pisitkun, Trairak; Dummer, Patrick; Somparn, Poorichaya; Hirankarn, Nattiya; Kopp, Jeffrey B.; Knepper, Mark A.

    2014-01-01

    In the current era of large-scale biology, systems biology has evolved as a powerful approach to identify complex interactions within biological systems. In addition to high throughput identification and quantification techniques, methods based on high-quality mono-specific antibodies remain an essential element of the approach. To assist the large-scale design and production of peptide-directed antibodies for systems biology studies, we developed a fully integrated online application, AbDesi...

  4. Study on the Relevance between Cirrhosis Syndrome Types of TCM and Biological Detection Indexes%肝硬化证型与生物学指标相关性研究

    Institute of Scientific and Technical Information of China (English)

    刘倩; 王晓素

    2012-01-01

    Objective:Chromic hepatitis B liver cirrhosis differentiation of symptoms and signs for classification of syndrome and relevance of biological indicators were studied, so as to provide some reference for liver cirrhosis differentiation of symptoms and signs for classification of syndrome. Methods: 170 liver cirrhosis patients chosen by adoption standards were investigated systematically. General states of health, case history, general state of health were collected for syndrome differentiation. Liver function ( ALT, AST, AKP, GGT, Alb, PA, STB, CB, BA ), HA, PT, lipid ( CHO, TG, HDL, LDL, Apo-Al ), and other indicators of modern medicine were detected simultaneously. Information database was established to understand the distribution characteristics of the disease. One-factor ANOVA was applied to investigate the relevance between the differentiation of symptoms and signs for classification of syndrome and objective index. Results : Endoretention of damp-heat and hepatic and renal yin deficiency are most common in syndrome types of TCM distribution. For endoretention of damp-heat and asdthenic splenonephro-yang, AST is higher. While for splenic asthenia phlegmatic hygrosis, AST is very low. The difference between endoretention of damp-heat and splenic asthenia phlegmatic hygrosis is significant (P hepatic and renal yin deficiency> blood stasis resistanre> endoretention of damp-heat> splenic asthenia phlegmatic hygrosis> asdthenic splenonephro-yang (P blood stasis resistance> splenic asthenia phlegmatic hygrosis> stagnation of liver-QI> hepatic and renal yin deficiency> endoretention of damp heat (P endoretention of damp heat> splenic asthenia phlegmatic hygrosis> blood stasis resistance> hepatic and renal yin deficiency> stagnation of liver-QI (P asdthenic splenonephro-yang >blood stasis resistance> splenic asthenia phlegmatic hygrosis> hepatic and renal yin deficiency> depression of liver-QI. Stagnation of liver-QI, hepatic and renal yin deficiency, splenic

  5. A review of biological processes within oceanic water columns relevant to the assessment of the safety of disposal of waste, notably radioactive isotopes on or within the sea bed

    International Nuclear Information System (INIS)

    Pelagic biological processes and their connotations in the assessment of possible dispersal mechanisms of contaminants released on the deep oceanic seabed are reviewed. Biological gradients tend to be from the surface down so the search is for processes which run counter to these general gradients. Observed profiles of standing crop of both plankton and micronekton show that below 2000 m biological activity would have to be exceptionally dynamic to have an influence that will even approach within an order of magnitude of the dispersive effect of physical mixing. Examination of all forms of known migration mechanisms fails to reveal such dynamic activity. Nor have any critical pathways been identified within the present or foreseeable pattern of exploitation of the oceans. However, a major gap in knowledge is whether the pattern of these biological processes changes substantially in the region of continental slopes. (author)

  6. Gamma spectra pictures using a digital plotter. Program MONO; Representacion de Espectros directos mediante un trazado digital. Prograa MONO

    Energy Technology Data Exchange (ETDEWEB)

    Los Arcos, J. M.

    1978-07-01

    The program MONO has been written for a CALCOMP-936 digital plotter operating off- -line with a UMI VAC 1106 computer, to obtain graphic representations of single gamma spectra stored on magnetic tape. It allows to plot the whole spectrum or only a part, as well as to draw a given spectrum on the same or different picture than the previous one. Ten representation scales are available and at up nine comment lines can be written in a graphic. (Author) 4 refs.

  7. Genetic structure and hierarchical population divergence history of Acer mono var. mono in South and Northeast China.

    Directory of Open Access Journals (Sweden)

    Chunping Liu

    Full Text Available Knowledge of the genetic structure and evolutionary history of tree species across their ranges is essential for the development of effective conservation and forest management strategies. Acer mono var. mono, an economically and ecologically important maple species, is extensively distributed in Northeast China (NE, whereas it has a scattered and patchy distribution in South China (SC. In this study, the genetic structure and demographic history of 56 natural populations of A. mono var. mono were evaluated using seven nuclear microsatellite markers. Neighbor-joining tree and STRUCTURE analysis clearly separated populations into NE and SC groups with two admixed-like populations. Allelic richness significantly decreased with increasing latitude within the NE group while both allelic richness and expected heterozygosity showed significant positive correlation with latitude within the SC group. Especially in the NE region, previous studies in Quercus mongolica and Fraxinus mandshurica have also detected reductions in genetic diversity with increases in latitude, suggesting this pattern may be common for tree species in this region, probably due to expansion from single refugium following the last glacial maximum (LGM. Approximate Bayesian Computation-based analysis revealed two major features of hierarchical population divergence in the species' evolutionary history. Recent divergence between the NE group and the admixed-like group corresponded to the LGM period and ancient divergence of SC groups took place during mid-late Pleistocene period. The level of genetic differentiation was moderate (FST  = 0.073; G'ST  = 0.278 among all populations, but significantly higher in the SC group than the NE group, mirroring the species' more scattered distribution in SC. Conservation measures for this species are proposed, taking into account the genetic structure and past demographic history identified in this study.

  8. Portal Hypertension Promotes Bacterial Translocation in Rats Mono- and Non Mono-Associated with Escherichia Coli C25

    OpenAIRE

    Jean-Nicolas Vauthey; Petra Duda; Anthony M. Wheatley; Philippe Gertsch

    1994-01-01

    The basis for the high incidence of infectious complications in portal hypertension (PHT) remains unclear. The hypothesis that PHT induces bacterial translocation (BT) was tested in a rat model with or without mono-association with streptomycin resistant Escherichia coli C25 and with or without hypovolemic shock. PHT was achieved by partial portal vein ligation and three weeks later hypovolemic shock (HS) was induced. Blood, liver, spleen and mesenteric lymph nodes cultures were performed twe...

  9. The relationship between mono-abundance and mono-age stellar populations in the Milky Way disk

    CERN Document Server

    Minchev, I; Chiappini, C; Martig, M; Anders, F; Matijevic, G; de Jong, R S

    2016-01-01

    Studying the Milky Way disk structure using stars in narrow bins of [Fe/H] and [alpha/Fe] has recently been proposed as a powerful method to understand the Galactic thick and thin disk formation. It has been assumed so far that these mono-abundance populations (MAPs) are also coeval, or mono-age, populations. Here we study this relationship for a Milky Way chemo-dynamical model and show that equivalence between MAPs and mono-age populations exists only for the high-[alpha/Fe] tail, where the chemical evolution curves of different Galactic radii are far apart. At lower [alpha/Fe]-values a MAP is composed of stars with a range in ages, even for small observational uncertainties and a small MAP bin size. Due to the disk inside-out formation, for these MAPs younger stars are typically located at larger radii, which results in negative radial age gradients that can be as large as 2 Gyr/kpc. Positive radial age gradients can result for MAPs at the lowest [alpha/Fe] and highest [Fe/H] end. Such variations with age p...

  10. Mono(2-ethylhexyl)phthalate accumulation disturbs energy metabolism of fat cells.

    Science.gov (United States)

    Chiang, Huai-Chih; Kuo, Ya-Ting; Shen, Chih-Che; Lin, Yi-Hua; Wang, Shu-Li; Tsou, Tsui-Chun

    2016-03-01

    Phthalates are lipophilic and tend to accumulate in adipose tissue, an important regulator of energy balance and glucose homeostasis. The study aimed to determine whether cellular phthalate accumulation influenced fat cell energy metabolism. Following a 3-day treatment with adipogenesis-inducing medium and a 2-day treatment with adipogenesis-maintaining medium, 3T3-L1 cells differentiated into adipocytes in the presence of a phthalate at a clinically relevant concentration (30-300 μM) for another 6 days. Two phthalates, di(2-ethylhexyl)phthalate and di-n-butylphthalate, and their metabolites, mono(2-ethylhexyl)phthalate (MEHP) and mono-n-butylphthalate, were used here. The phthalate treatments caused no marked effect on cytotoxicity and adipogenesis. Only the MEHP-treated adipocytes were found having smaller lipid droplets; MEHP accumulated in cells in a dose- and time-dependent manner. The MEHP-treated adipocytes exhibited significant increases in lipolysis and glucose uptake; quantitative real-time polymerase chain reaction (qPCR) analysis revealed correlated changes in expression of marker genes involved in adipogenesis, lipid metabolism, and glucose uptake. Analysis of oxygen consumption rate (a mitochondrial respiration indicator) and extracellular acidification rate (a glycolysis indicator) indicated a higher energy metabolism in the adipocytes. qPCR analysis of critical genes involved in mitochondrial biogenesis and/or energy metabolism showed that expression of peroxisome proliferator-activated receptor γ coactivator-1α, sirtuin 3, and protein kinase A were significantly enhanced in the MEHP-treated adipocytes. In vitro evidence of MEHP impacts on lipolysis, glucose uptake/glycolysis, and mitochondrial respiration/biogenesis demonstrates that MEHP accumulation disturbs energy metabolism of fat cells. PMID:25543134

  11. Statement on Allura Red AC and other sulphonated mono azo dyes authorised as food and feed additives

    Directory of Open Access Journals (Sweden)

    EFSA Panel on Food Additives and Nutrient Sources added to Food (ANS

    2013-06-01

    Full Text Available The ANS Panel has been asked by EFSA to assess the new scientific information that has become available since the adoption of the opinion on the re-evaluation of the food colouring agent Allura Red AC in 2009, in particular the positive findings from an in vivo comet assay in mice. The findings from this study have been interpreted in conjunction with all the available relevant data from genotoxicity testing, metabolism and carcinogenicity, and in consideration of possible species differences between mouse and rat. These new data have been considered in the context of the overall relevant data available not only for Allura Red AC but also for a number of other structurally related sulphonated mono azo dyes authorised as food additives, namely: Amaranth, Ponceau 4R, Sunset Yellow FCF, Tartrazine and Azorubine/Carmoisine. The Panel concluded that the new data by themselves were insufficient at this time to change the conclusions of the 2009 opinion on the safety of Allura Red AC and that there is currently no reason to revise the ADI. The read-across exercise has highlighted a shared pattern of effects for this class of substances that would warrant further investigation The Panel therefore recommended a repetition of the in vivo comet assay in mice, to be performed in compliance with the most recent and internationally validated experimental protocol, using whole cells and examining a wide range of tissues. These recommendations apply to all the sulphonated mono azo dyes included in this review.

  12. Fuzziness and Relevance Theory

    Institute of Scientific and Technical Information of China (English)

    Grace Qiao Zhang

    2005-01-01

    This paper investigates how the phenomenon of fuzzy language, such as `many' in `Mary has many friends', can be explained by Relevance Theory. It is concluded that fuzzy language use conforms with optimal relevance in that it can achieve the greatest positive effect with the least processing effort. It is the communicators themselves who decide whether or not optimal relevance is achieved, rather than the language form (fuzzy or non-fuzzy) used. People can skillfully adjust the deployment of different language forms or choose appropriate interpretations to suit different situations and communication needs. However, there are two challenges to RT: a. to extend its theory from individual relevance to group relevance; b. to embrace cultural considerations (because when relevance principles and cultural protocols are in conflict, the latter tends to prevail).

  13. Relevance Theory in Translation

    Institute of Scientific and Technical Information of China (English)

    Shao Jun; Jiang Min

    2008-01-01

    In perspective of relevance theory, translation is regarded as communication. According to relevance theory, communication not only requires encoding, transfer and decoding processes, but also involves inference in addition. As communication, translation decision-making is also based on the human beings' inferential mental faculty. Concentrating on relevance theory, this paper tries to analyze and explain some translation phenomena in two English versions of Cai Gen Tan-My Crude Philosophy of Life.

  14. Effect of Mono and Di-rhamnolipids on Biofilms Pre-formed by Bacillus subtilis BBK006.

    Science.gov (United States)

    De Rienzo, Mayri A Díaz; Martin, Peter J

    2016-08-01

    Different microbial inhibition strategies based on the planktonic bacterial physiology have been known to have limited efficacy on the growth of biofilms communities. This problem can be exacerbated by the emergence of increasingly resistant clinical strains. Biosurfactants have merited renewed interest in both clinical and hygienic sectors due to their potential to disperse microbial biofilms. In this work, we explore the aspects of Bacillus subtilis BBK006 biofilms and examine the contribution of biologically derived surface-active agents (rhamnolipids) to the disruption or inhibition of microbial biofilms produced by Bacillus subtilis BBK006. The ability of mono-rhamnolipids (Rha-C10-C10) produced by Pseudomonas aeruginosa ATCC 9027 and the di-rhamnolipids (Rha-Rha-C14-C14) produced by Burkholderia thailandensis E264, and phosphate-buffered saline to disrupt biofilm of Bacillus subtilis BBK006 was evaluated. The biofilm produced by Bacillus subtilis BBK006 was more sensitive to the di-rhamnolipids (0.4 g/L) produced by Burkholderia thailandensis than the mono-rhamnolipids (0.4 g/L) produced by Pseudomonas aeruginosa ATCC 9027. Rhamnolipids are biologically produced compounds safe for human use. This makes them ideal candidates for use in new generations of bacterial dispersal agents and useful for use as adjuvants for existing microbial suppression or eradication strategies. PMID:27113589

  15. iOS Development using MonoTouch Cookbook

    CERN Document Server

    Tavlikos, Dimitris

    2011-01-01

    The book is written in a cookbook style, presenting examples in the style of recipes, allowing you to go directly to your topic of interest, or follow topics throughout a chapter to gain in-depth knowledge. This book is essential for C# and .NET developers with no previous experience in iOS development and Objective-C developers that want to make a transition to the benefits of MonoTouch and the C# language, for creating complete, compelling iPhone, iPod and iPad applications and deploying them to the App Store.

  16. Antioxidant and cytotoxic activity of mono- and bissalicylic acid derivatives

    OpenAIRE

    Đurendić Evgenija A.; Savić Marina P.; Jovanović-Šanta Suzana S.; Sakač Marija N.; Kojić Vesna V.; Szécsi Mihály; Oklješa Aleksandar M.; Poša Mihalj M.; Penov-Gaši Katarina M.

    2014-01-01

    A simple synthesis of mono- and bis-salicylic acid derivatives 1-10 by the transesterification of methyl salicylate (methyl 2-hydroxybenzoate) with 3-oxapentane-1,5-diol, 3,6- dioxaoctane-1,8-diol, 3,6,9-trioxaundecane-1,11-diol, propane-1,2-diol or 1-aminopropan- 2-ol in alkaline conditions is reported. All compounds were tested in vitro on three malignant cell lines (MCF-7, MDA-MB-231, PC-3) and one non-tumor cell line (MRC- 5). Strong cytotoxicity agains...

  17. Mono- and bis-thiazolium salts have potent antimalarial activity.

    Science.gov (United States)

    Hamzé, Abdallah; Rubi, Eric; Arnal, Pascal; Boisbrun, Michel; Carcel, Carole; Salom-Roig, Xavier; Maynadier, Marjorie; Wein, Sharon; Vial, Henri; Calas, Michèle

    2005-05-19

    Three new series comprising 24 novel cationic choline analogues and consisting of mono- or bis (N or C-5-duplicated) thiazolium salts have been synthesized. Bis-thiazolium salts showed potent antimalarial activity (much superior to monothiazoliums). Among them, bis-thiazolium salts 12 and 13 exhibited IC(50) values of 2.25 nM and 0.65 nM, respectively, against P. falciparum in vitro. These compounds also demonstrated good in vivo activity (ED(50)

  18. Mono-Z dark matter search with the ATLAS detector

    CERN Document Server

    Basalaev, Artem; The ATLAS collaboration

    2016-01-01

    A search with ATLAS detector is presented for collider signatures of weakly interacting dark matter particles (WIMPs) leading to mono-Z signal. Events with large missing transverse momentum and two oppositely-charged electrons or muons consistent with the decay of a Z-boson were selected in analysis. The limits on the mass scale of the contact interaction as a function of the dark matter particle mass and the limits on the coupling and scalar particle mediator obtained from Run 1 ATLAS data are shown. Analysis techniques specific to Run 2 are reviewed.

  19. Mono-Higgs signature in fermionic dark matter model

    OpenAIRE

    Ghorbani, Karim; Khalkhali, Leila

    2016-01-01

    In light of Higgs boson discovery, we explore mono-Higgs signature in association with dark matter pair production at the LHC. For two channels with $\\gamma\\gamma+\\text{MET}$ and $b \\bar b+\\text{MET}$ in the final state we simulate the SM backgrounds and signal events at $\\sqrt{s} = 14$ TeV. We then estimate the LHC sensitivities for various benchmark points for two integrated luminosities ${\\cal L} = 300~\\text{fb}^{-1}$ and ${\\cal L} = 3~ \\text{ab}^{-1}$. We constrain the Yukawa coupling of ...

  20. Impact Assessment of Cigarette Smoke Exposure on Organotypic Bronchial Epithelial Tissue Cultures: A Comparison of Mono-Culture and Coculture Model Containing Fibroblasts.

    Science.gov (United States)

    Iskandar, Anita R; Xiang, Yang; Frentzel, Stefan; Talikka, Marja; Leroy, Patrice; Kuehn, Diana; Guedj, Emmanuel; Martin, Florian; Mathis, Carole; Ivanov, Nikolai V; Peitsch, Manuel C; Hoeng, Julia

    2015-09-01

    Organotypic 3D cultures of epithelial cells are grown at the air-liquid interface (ALI) and resemble the in vivo counterparts. Although the complexity of in vivo cellular responses could be better manifested in coculture models in which additional cell types such as fibroblasts were incorporated, the presence of another cell type could mask the response of the other. This study reports the impact of whole cigarette smoke (CS) exposure on organotypic mono- and coculture models to evaluate the relevancy of organotypic models for toxicological assessment of aerosols. Two organotypic bronchial models were directly exposed to low and high concentrations of CS of the reference research cigarette 3R4F: monoculture of bronchial epithelial cells without fibroblasts (BR) and coculture with fibroblasts (BRF) models. Adenylate kinase (AK)-based cytotoxicity, cytochrome P450 (CYP) 1A1/1B1 activity, tissue histology, and concentrations of secreted mediators into the basolateral media, as well as transcriptomes were evaluated following the CS exposure. The results demonstrated similar impact of CS on the AK-based cytotoxicity, CYP1A1/1B1 activity, and tissue histology in both models. However, a greater number of secreted mediators was identified in the basolateral media of the monoculture than in the coculture models. Furthermore, annotation analysis and network-based systems biology analysis of the transcriptomic profiles indicated a more prominent cellular stress and tissue damage following CS in the monoculture epithelium model without fibroblasts. Finally, our results indicated that an in vivo smoking-induced xenobiotic metabolism response of bronchial epithelial cells was better reflected from the in vitro CS-exposed coculture model. PMID:26085348

  1. Mono-W Dark Matter Signals at the LHC: Simplified Model Analysis

    CERN Document Server

    Bell, Nicole F; Leane, Rebecca K

    2015-01-01

    We study mono-W signals of dark matter (DM) production at the LHC, in the context of gauge invariant renormalizable models. We analyze two simplified models, one involving an s-channel Z' mediator and the other a t-channel colored scalar mediator, and consider examples in which the DM-quark couplings are either isospin conserving or isospin violating after electroweak symmetry breaking. While previous work on mono-W signals have focused on isospin violating EFTs, obtaining very strong limits, we find that isospin violating effects are small once such physics is embedded into a gauge invariant simplified model. We thus find that the 8 TeV mono-W results are much less constraining than those arising from mono-jet searches. Considering both the leptonic (mono-lepton) and hadronic (mono fat jet) decays of the W, we determine the 14 TeV LHC reach of the mono-W searches with 3000 fb$^{-1}$ of data. While a mono-W signal would provide an important complement to a mono-jet discovery channel, existing constraints on t...

  2. On the generation of mono-implicit Runge-Kutta-Nyström methods by mono-implicit Runge-Kutta methods

    OpenAIRE

    de Meyer, Hans; Vanden Berghe, Guido; Van Hecke, Tanja; Van Daele, Marnix

    1997-01-01

    Mono-implicit Runge-Kutta methods can be used to generate implicit Runge-Kutta-Nystrom (IRKN) methods for the numerical solution of systems of second-order differential equations. The paper is concerned with the investigation of the conditions to be fulfilled by the mono-implicit Runge-Kutta (MIRK) method in order to generate a mono-implicit Runge-Kutta-Nystrom method (MIRKN) that is P-stable. One of the main theoretical results is the property that MIRK methods (in standard form) cannot gene...

  3. MonoSLAM: real-time single camera SLAM.

    Science.gov (United States)

    Davison, Andrew J; Reid, Ian D; Molton, Nicholas D; Stasse, Olivier

    2007-06-01

    We present a real-time algorithm which can recover the 3D trajectory of a monocular camera, moving rapidly through a previously unknown scene. Our system, which we dub MonoSLAM, is the first successful application of the SLAM methodology from mobile robotics to the "pure vision" domain of a single uncontrolled camera, achieving real time but drift-free performance inaccessible to Structure from Motion approaches. The core of the approach is the online creation of a sparse but persistent map of natural landmarks within a probabilistic framework. Our key novel contributions include an active approach to mapping and measurement, the use of a general motion model for smooth camera movement, and solutions for monocular feature initialization and feature orientation estimation. Together, these add up to an extremely efficient and robust algorithm which runs at 30 Hz with standard PC and camera hardware. This work extends the range of robotic systems in which SLAM can be usefully applied, but also opens up new areas. We present applications of MonoSLAM to real-time 3D localization and mapping for a high-performance full-size humanoid robot and live augmented reality with a hand-held camera. PMID:17431302

  4. Electrical properties mono- and polycrystalline silicon solar cells

    Directory of Open Access Journals (Sweden)

    L.A. Dobrzański

    2013-08-01

    Full Text Available Purpose: The goal of this article was to compare the properties of mono- and polycrystalline silicon solar cells. It was based on measurements performed of current-voltage characteristics and calculated parameters using mathematical formulas. Design/methodology/approach: Light and dark current-voltage characteristics of solar cells were measured using a solar simulator PV Test Solutions company SS150AAA model. The measurements were performed under standard conditions (Pin = 1000 W/m2, AM1.5G spectrum, T = 25°C. The basic characteristic of the solar cells were determined using the software SolarLab and calculated using mathematical formulas. Findings: Results and their analysis allow to conclude that measurements of current-voltage characteristics enable characterization of the basic parameters of solar cells. Can give important information about the property of prepared metallic contacts on the solar cells. Practical implications: Knowledge about the current-voltage characteristics of solar cells and their basic parameters enables the assessment of the quality of their production and the improvement. Originality/value: The paper presents some researches of the basic parameters of mono- and polycrystalline solar cells determining the current-voltage characteristics.

  5. Bioinformatics and School Biology

    Science.gov (United States)

    Dalpech, Roger

    2006-01-01

    The rapidly changing field of bioinformatics is fuelling the need for suitably trained personnel with skills in relevant biological "sub-disciplines" such as proteomics, transcriptomics and metabolomics, etc. But because of the complexity--and sheer weight of data--associated with these new areas of biology, many school teachers feel…

  6. Transitions from mono- to co- to tri-culture uniquely affect gene expression in breast cancer, stromal, and immune compartments.

    Science.gov (United States)

    Regier, Mary C; Maccoux, Lindsey J; Weinberger, Emma M; Regehr, Keil J; Berry, Scott M; Beebe, David J; Alarid, Elaine T

    2016-08-01

    Heterotypic interactions in cancer microenvironments play important roles in disease initiation, progression, and spread. Co-culture is the predominant approach used in dissecting paracrine interactions between tumor and stromal cells, but functional results from simple co-cultures frequently fail to correlate to in vivo conditions. Though complex heterotypic in vitro models have improved functional relevance, there is little systematic knowledge of how multi-culture parameters influence this recapitulation. We therefore have employed a more iterative approach to investigate the influence of increasing model complexity; increased heterotypic complexity specifically. Here we describe how the compartmentalized and microscale elements of our multi-culture device allowed us to obtain gene expression data from one cell type at a time in a heterotypic culture where cells communicated through paracrine interactions. With our device we generated a large dataset comprised of cell type specific gene-expression patterns for cultures of increasing complexity (three cell types in mono-, co-, or tri-culture) not readily accessible in other systems. Principal component analysis indicated that gene expression was changed in co-culture but was often more strongly altered in tri-culture as compared to mono-culture. Our analysis revealed that cell type identity and the complexity around it (mono-, co-, or tri-culture) influence gene regulation. We also observed evidence of complementary regulation between cell types in the same heterotypic culture. Here we demonstrate the utility of our platform in providing insight into how tumor and stromal cells respond to microenvironments of varying complexities highlighting the expanding importance of heterotypic cultures that go beyond conventional co-culture. PMID:27432323

  7. Dating Lake Tahoe (CA/NV) and Mono Lake (CA) sediment using palaeomagnetic secular variation as a chronology for late Pleistocene palaeoclimate in the U.S. Great Basin

    Science.gov (United States)

    Liddicoat, Joseph

    2010-05-01

    In 1976, six meters of graded and varved sediment were recovered in three piston cores from Lake Tahoe, CA/NV, and used for palaeomagnetic and sedimentologic investigations (Palmer et al., 1979; Denham, 1981). The long-term changes (secular variation) in the Lake Tahoe palaeomagnetic record were compared to secular variation in exposed lacustrine sediment of the Wilson Creek Formation (Lajoie, 1993) in the Mono Basin, CA, (Denham and Cox, 1971), 100 km away. During the more than 30 years since the coring was done in Lake Tahoe, the record of palaeomagnetic secular variation in the Mono Basin and elsewhere in the Great Basin has been refined (Liddicoat and Coe, 1979; Lund et al., 1988, Liddicoat and Coe, 1997; Liddicoat and Coe, 1998; Benson et al., 1998; Negrini and Davis, 1992; Kent et al., 2002; Zimmerman et al., 2006) to allow a reexamination of the palaeomagnetic directions and environmental magnetic record in the Lake Tahoe cores and the age of those sediments. Inferences are also possible about the sedimentological importance during the recording of the palaeomagnetic field at Lake Tahoe and possibly in the Mono Basin, and the age of the Lake Tahoe sediment recovered, which postdates the Mono Lake Excursion. The age of the Mono Lake Excursion and Wilson Creek Formation is relevant to investigations of Late Pleistocene palaeoclimate reconstructions for the U.S. Great Basin (Zimmerman et al., 2006).

  8. 40 CFR 721.1729 - Boric acid (H3BO3), mixed esters with polyethylene glycol mono-Bu ether and polyethylene glycol...

    Science.gov (United States)

    2010-07-01

    ... polyethylene glycol mono-Bu ether and polyethylene glycol mono Me ether. 721.1729 Section 721.1729 Protection... acid (H3BO3), mixed esters with polyethylene glycol mono-Bu ether and polyethylene glycol mono Me ether... identified as boric acid (H3BO3), mixed esters with polyethylene glycol mono-Bu ether and polyethylene......

  9. Dividends, sustainability and relevance

    OpenAIRE

    Mantovi, A.

    2011-01-01

    Sustainability and relevance of dividend policies are addressed in terms of an optimal control model set forth by Feichtinger et al. (2007), by means of which two different capitalization measures,accounting for dividends and capital gains, can be given explicit representation. In the light of the theory of capital tailored by Dorfman (1969), an intertemporal economic measure of shareholder value is introduced, together with the associated shadow price. Relevant tradeoffs and scale effects ar...

  10. Three-dimensional model of the Mono Basin (California): finite element analysis of the interaction between the Hartley Spring Fault and the Mono Dike

    Science.gov (United States)

    La Marra, D.; Manconi, A.; McDonnell, A.; Battaglia, M.

    2012-12-01

    Mono Basin is a northward-trending structural depression lying immediately east of the central Sierra Nevada (California) that extends from the northern edge of Long Valley Caldera towards the center of Mono Lake. The Mono-Inyo Craters volcanic chain forms a prominent 17-km-long arcuate ridge within the Mono Basin. Recent studies have proposed that the volcanism and tectonism in this area is likely interrelated. Stratigraphic data suggest that a series of strong earthquakes occurred during the North Mono-Inyo eruption sequence of 1350 A.D. Geological data are consistent with rupture of the Hartley Springs fault during the eruption sequence. The temporal proximity of these events suggests the possibility of a causal relationship. We use the Finite Element Method (FEM) to generate a three-dimensional model of the Mono Basin and investigate the feedback mechanism between dike intrusion and slip along the Hartley Springs fault. First we combine the potential of the FEM with the Okada (1992) analytical solution for a homogeneous elastic flat half-space to validate our model. Then, to better simulate a geodynamic model of the Mono Basin, we implement more realistic dynamics that include gravity forces, vertical and lateral heterogeneities of the crust, and topography. We evaluate the distribution of local stress changes to study the influence of the Inyo dike intrusion on the Hartley Springs fault and how slip along the fault may encourage the propagation of dikes towards the surface. We employ the Coulomb stress change as a failure criterion on the Hartley Springs fault. Preliminary results indicate that slip along the Hartley Springs fault may have encouraged the intrusion of the Mono Dike.

  11. Synthesis and Photocytotoxicity of Mono-functionalised Porphyrin with Valine Moiety

    Institute of Scientific and Technical Information of China (English)

    Wei Min SHI; Jian WU; Yi Feng WU; Kai Xian QIAN

    2004-01-01

    A mono-funtionalised tetraphenylporphyrin (TPP) bearing valine moiety at the phenyl ring was synthesized for photocytotoxicity examination in four steps, starting from regiospecific mono-nitration of TPP at the phenyl ring. The in vitro photocytotoxicitic effect against SPC-A1 adenocarcinona cell line was tested.

  12. Synthesis, purification, and time-dependent disposition studies of 9- or 10-mono-iodostearic acid and 9- and 10-mono-iodostearyl carnitine

    International Nuclear Information System (INIS)

    The purpose of this investigation was to evaluate the potential use of radiolabeled 9- or 10-mono-iodostearyl carnitine as a perfusion and metabolic imaging agent for the heart. Radiochemical purity was achieved and determined by the use of silica gel and/or anion exchange resin chromatography. Radiochemical yields of 45-63 and 4% were obtained for the fatty acid and carnitine ester, respectively. Male albino mice were sacrificed at 2, 5, 7, 10, 15, 20, 30, and 50 minutes post-injection with either 125I 9- or 10-mono-iodostearic acid or 9- or 10-mono-iodostearyl (-) carnitine. The lungs, liver heart, kidney, spleen, pancreas, small intestine, stomach, thyroid, blood, fat, and skeletal muscle tissue were excised and assayed for levels of radioactivity in a NaI crystal well counter. The very low target-to-nontarget ratios obtained with 125I 9- or 10-mono-iodostearyl carnitine in mice strongly suggest that radioiodinated 9- or 10-mono-iodostearyl carnitine is not suitable for use as a myocardial imaging agent. However, radioiodinated 9- or 10-mono-iodostearic acid showed promise as a myocardial imaging agent and may warrant further investigation

  13. Aryl hydrocarbon mono-oxygenase activity in human lymphocytes

    Energy Technology Data Exchange (ETDEWEB)

    Griffin, G.D.; Schuresko, D.D.

    1981-06-01

    Aryl hydrocarbon mono-oxygenase (AHM), an enzyme of key importance in metabolism of xenobiotic chemicals such as polynuclear aromatic hydrocarbons (PNA), is present in human lymphocytes. Studies investing the relation of activity of AHM in human lymphocytes to parameters such as disease state, PNA exposure, in vitro mitogen stimulation, etc. have been summarized in this report. Some studies have demonstrated increased AHM activity in lymphocytes from cigarette smokers (compared to nonsmokers), and in lung cancer patients when compared to appropriate control groups. These observations are confused by extreme variability in human lymphocyte AHM activities, such variability arising from factors such as genetic variation in AHM activity, variation in in vitro culture conditions which affect AHM activity, and the problematical relationship of common AHM assays to actual PNA metabolism taking place in lymphocytes. If some of the foregoing problems can be adequately addressed, lymphocyte AHM activity could hold the promise of being a useful biomarker system for human PNA exposure.

  14. Mono-Higgs Detection of Dark Matter at the LHC

    CERN Document Server

    Berlin, Asher; Wang, Lian-Tao

    2014-01-01

    Motivated by the recent discovery of the Higgs boson, we investigate the possibility that a missing energy plus Higgs final state is the dominant signal channel for dark matter at the LHC. We consider examples of higher-dimension operators where a Higgs and dark matter pair are produced through an off-shell Z or photon, finding potential sensitivity at the LHC to cutoff scales of around a few hundred GeV. We generalize this production mechanism to a simplified model by introducing a Z' as well as a second Higgs doublet, where the pseudoscalar couples to dark matter. Resonant production of the Z' which decays to a Higgs plus invisible particles gives rise to a potential mono-Higgs signal. This may be observable at the 14 TeV LHC at low tan beta and when the Z' mass is roughly in the range 600 GeV to 1.3 TeV.

  15. Mechanically flexible optically transparent porous mono-crystalline silicon substrate

    KAUST Repository

    Rojas, Jhonathan Prieto

    2012-01-01

    For the first time, we present a simple process to fabricate a thin (≥5μm), mechanically flexible, optically transparent, porous mono-crystalline silicon substrate. Relying only on reactive ion etching steps, we are able to controllably peel off a thin layer of the original substrate. This scheme is cost favorable as it uses a low-cost silicon <100> wafer and furthermore it has the potential for recycling the remaining part of the wafer that otherwise would be lost and wasted during conventional back-grinding process. Due to its porosity, it shows see-through transparency and potential for flexible membrane applications, neural probing and such. Our process can offer flexible, transparent silicon from post high-thermal budget processed device wafer to retain the high performance electronics on flexible substrates. © 2012 IEEE.

  16. Mono-jet Signatures of Gluphilic Scalar Dark Matter

    CERN Document Server

    Godbole, Rohini M; Shivaji, Ambresh; Tait, Tim M P

    2016-01-01

    A gluphilic scalar dark matter (GSDM) model has recently been proposed as an interesting vision for WIMP dark matter communicating dominantly with the Standard Model via gluons. We discuss the collider signature of a hard jet recoiling against missing momentum ("mono-jet") in such a construction, whose leading contribution is at one-loop. We compare the full one-loop computation with an effective field theory (EFT) treatment, and find (as expected) that EFT does not accurately describe regions of parameter space where mass of the colored mediator particles are comparable to the experimental cuts on the missing energy. We determine bounds (for several choices of SU(3) representation of the mediator) from the $\\sqrt{s}=$ 8 TeV data, and show the expected reach of the $\\sqrt{s}=$ 13 TeV LHC and a future 100 TeV $pp$ collider to constrain or discover GSDM models.

  17. Fatigue Analysis of a Mono-Tower Platform

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Sørensen, John Dalsgaard; Brincker, Rune

    In this paper, a fatigue reliability analysis of a Mono-tower platform is presented. The failure mode, fatigue failure in the butt welds, is investigated with two different models. The one with the fatigue strength expressed through SN relations, the other with the fatigue strength expressed...... through linear-elastic fracture mechanics (LEFM). In determining the cumulative fatigue damage, Palmgren-Miner's rule is applied. Element reliability as well as systems reliability is estimated using first-order reliability methods (FORM). The sensitivity of the systems reliability to various parameters...... is investigated. The systems reliability index, estimated by using the fatigue elements with the fatigue strength expressed through SN relations, is found to be smaller than the systems reliability index estimated by using LEFM. It is shown that the systems reliability index is very sensitive to...

  18. Laschamp and Mono Lake geomagnetic excursions recorded in New Zealand

    Science.gov (United States)

    Cassata, William S.; Singer, Brad S.; Cassidy, John

    2008-04-01

    Eight basaltic lavas from the Auckland volcanic field, New Zealand, record three distinct sets of excursional geomagnetic field directions and low paleointensities, however the timing and therefore paleomagnetic significance of these records have been poorly understood. Radiocarbon, K-Ar, and thermoluminescence dating constrain these lavas to have erupted during the last 75 ka, a period during which as many as three excursions have been recorded differentially at several northern and fewer southern hemisphere sites. Forty 40Ar/ 39Ar incremental heating experiments conducted on groundmass from seven of these excursional lavas indicate that they erupted during at least two periods, at 39.1 ± 4.1 and 31.6 ± 1.8 ka, coincident with 40Ar/ 39Ar, astrochronologic, and 14C ages determined for the Laschamp and Mono Lake excursions, respectively. Samples from a lava flow associated with a third cluster of virtual geomagnetic poles (VGPs) are complicated by low concentrations of radiogenic argon in the presence of excess argon, and thus yield discordant age spectra and an imprecise age of 26.6 ± 8.1 ka. Our findings indicate that the Laschamp and Mono Lake excursions, until recently identified unequivocally and isotopically dated only in the Northern Hemisphere, were globally synchronized at 40 ± 1 and 32 ± 1 ka. However, the VGPs of lavas that record the Laschamp excursion in New Zealand and France are inconsistent with a simple clockwise looping geometry inferred from VGP paths obtained in eight marine sediment cores spanning the Laschamp excursion. We suggest that the differences in VGPs recorded at the various sites are significant and may point to non-axial dipole components and lower mantle control on transitional fields during short-lived excursions.

  19. Collide and Conquer: Constraints on Simplified Dark Matter Models using Mono-X Collider Searches

    CERN Document Server

    Brennan, A J; Gramling, J; Jacques, T D

    2016-01-01

    The use of simplified models as a tool for interpreting dark matter collider searches has become increasingly prevalent, and while early Run II results are beginning to appear, we look to see what further information can be extracted from the Run I dataset. We consider three `standard' simplified models that couple quarks to fermionic singlet dark matter: an $s$-channel vector mediator with vector or axial-vector couplings, and a $t$-channel scalar mediator. Upper limits on the couplings are calculated and compared across three alternate channels, namely mono-jet, mono-$Z$ (leptonic) and mono-$W/Z$ (hadronic). The strongest limits are observed in the mono-jet channel, however the computational simplicity and absence of significant $t$-channel model width effects in the mono-boson channels make these a straightforward and competitive alternative. We also include a comparison with relic density and direct detection constraints.

  20. Glass-liquid-glass reentrance in mono-component colloidal dispersions

    International Nuclear Information System (INIS)

    The self-consistent generalized Langevin equation (SCGLE) theory of colloid dynamics is employed to describe the ergodic-non-ergodic transition in model mono-disperse colloidal dispersions whose particles interact through hard-sphere plus short-ranged attractive forces. The ergodic-non-ergodic phase diagram in the temperature-concentration state space is determined for the hard-sphere plus attractive Yukawa model within the mean spherical approximation for the static structure factor by solving a remarkably simple equation for the localization length of the colloidal particles. Finite real values of this property signals non-ergodicity and determines the non-ergodic parameters f(k) and fs(k). The resulting phase diagram for this system, which involves the existence of reentrant (repulsive and attractive) glass states, is compared with the corresponding prediction of mode coupling theory. Although both theories coincide in the general features of this phase diagram, there are also clear qualitative differences. One of the most relevant is the SCGLE prediction that the ergodic-attractive glass transition does not preempt the gas-liquid phase transition, but always intersects the corresponding spinodal curve on its high-concentration side. We also calculate the ergodic-non-ergodic phase diagram for the sticky hard-sphere model to illustrate the dependence of the predicted SCGLE dynamic phase diagram on the choice of one important constituent element of the SCGLE theory

  1. Glass-liquid-glass reentrance in mono-component colloidal dispersions

    Energy Technology Data Exchange (ETDEWEB)

    Ramirez-Gonzalez, P E; Medina-Noyola, M [Instituto de Fisica ' Manuel Sandoval Vallarta' , Universidad Autonoma de San Luis Potosi, Alvaro Obregon 64, 78000 San Luis Potosi, SLP (Mexico); Vizcarra-Rendon, A [Unidad Academica de Fisica, Universidad Autonoma de Zacatecas, Paseo la Bufa y Calzada Solidaridad, 98600, Zacatecas, Zac. (Mexico); Guevara-Rodriguez, F de J [Coordinacion de IngenierIa Molecular, Instituto Mexicano del Petroleo, Eje Central Lazaro Cardenas 152, 07730 Mexico, DF (Mexico)

    2008-05-21

    The self-consistent generalized Langevin equation (SCGLE) theory of colloid dynamics is employed to describe the ergodic-non-ergodic transition in model mono-disperse colloidal dispersions whose particles interact through hard-sphere plus short-ranged attractive forces. The ergodic-non-ergodic phase diagram in the temperature-concentration state space is determined for the hard-sphere plus attractive Yukawa model within the mean spherical approximation for the static structure factor by solving a remarkably simple equation for the localization length of the colloidal particles. Finite real values of this property signals non-ergodicity and determines the non-ergodic parameters f(k) and f{sub s}(k). The resulting phase diagram for this system, which involves the existence of reentrant (repulsive and attractive) glass states, is compared with the corresponding prediction of mode coupling theory. Although both theories coincide in the general features of this phase diagram, there are also clear qualitative differences. One of the most relevant is the SCGLE prediction that the ergodic-attractive glass transition does not preempt the gas-liquid phase transition, but always intersects the corresponding spinodal curve on its high-concentration side. We also calculate the ergodic-non-ergodic phase diagram for the sticky hard-sphere model to illustrate the dependence of the predicted SCGLE dynamic phase diagram on the choice of one important constituent element of the SCGLE theory.

  2. Diet-induced and mono-genetic obesity alter volatile organic compound signature in mice.

    Science.gov (United States)

    Kistler, Martin; Muntean, Andreea; Szymczak, Wilfried; Rink, Nadine; Fuchs, Helmut; Gailus-Durner, Valerie; Wurst, Wolfgang; Hoeschen, Christoph; Klingenspor, Martin; Hrabě de Angelis, Martin; Rozman, Jan

    2016-03-01

    The prevalence of obesity is still rising in many countries, resulting in an increased risk of associated metabolic diseases. In this study we aimed to describe the volatile organic compound (VOC) patterns symptomatic for obesity. We analyzed high fat diet (HFD) induced obese and mono-genetic obese mice (global knock-in mutation in melanocortin-4 receptor MC4R-ki). The source strengths of 208 VOCs were analyzed in ad libitum fed mice and after overnight food restriction. Volatiles relevant for a random forest-based separation of obese mice were detected (26 in MC4R-ki, 22 in HFD mice). Eight volatiles were found to be important in both obesity models. Interestingly, by creating a partial correlation network of the volatile metabolites, the chemical and metabolic origins of several volatiles were identified. HFD-induced obese mice showed an elevation in the ketone body acetone and acrolein, a marker of lipid peroxidation, and several unidentified volatiles. In MC4R-ki mice, several yet-unidentified VOCs were found to be altered. Remarkably, the pheromone (methylthio)methanethiol was found to be reduced, linking metabolic dysfunction and reproduction. The signature of volatile metabolites can be instrumental in identifying and monitoring metabolic disease states, as shown in the screening of the two obese mouse models in this study. Our findings show the potential of breath gas analysis to non-invasively assess metabolic alterations for personalized diagnosis. PMID:26860833

  3. Relevance, Derogation and Permission

    Science.gov (United States)

    Stolpe, Audun

    We show that a recently developed theory of positive permission based on the notion of derogation is hampered by a triviality result that indicates a problem with the underlying full-meet contraction operation. We suggest a solution that presupposes a particular normal form for codes of norms, adapted from the theory of relevance through propositional letter sharing. We then establish a correspondence between contractions on sets of norms in input/output logic (derogations), and AGM-style contractions on sets of formulae, and use it as a bridge to migrate results on propositional relevance from the latter to the former idiom. Changing the concept accordingly we show that positive permission now incorporates a relevance requirement that wards off triviality.

  4. The Limits to Relevance

    Science.gov (United States)

    Averill, M.; Briggle, A.

    2006-12-01

    Science policy and knowledge production lately have taken a pragmatic turn. Funding agencies increasingly are requiring scientists to explain the relevance of their work to society. This stems in part from mounting critiques of the "linear model" of knowledge production in which scientists operating according to their own interests or disciplinary standards are presumed to automatically produce knowledge that is of relevance outside of their narrow communities. Many contend that funded scientific research should be linked more directly to societal goals, which implies a shift in the kind of research that will be funded. While both authors support the concept of useful science, we question the exact meaning of "relevance" and the wisdom of allowing it to control research agendas. We hope to contribute to the conversation by thinking more critically about the meaning and limits of the term "relevance" and the trade-offs implicit in a narrow utilitarian approach. The paper will consider which interests tend to be privileged by an emphasis on relevance and address issues such as whose goals ought to be pursued and why, and who gets to decide. We will consider how relevance, narrowly construed, may actually limit the ultimate utility of scientific research. The paper also will reflect on the worthiness of research goals themselves and their relationship to a broader view of what it means to be human and to live in society. Just as there is more to being human than the pragmatic demands of daily life, there is more at issue with knowledge production than finding the most efficient ways to satisfy consumer preferences or fix near-term policy problems. We will conclude by calling for a balanced approach to funding research that addresses society's most pressing needs but also supports innovative research with less immediately apparent application.

  5. Relevant Subspace Clustering

    DEFF Research Database (Denmark)

    Müller, Emmanuel; Assent, Ira; Günnemann, Stephan; Krieger, Ralph; Seidl, Thomas

    Subspace clustering aims at detecting clusters in any subspace projection of a high dimensional space. As the number of possible subspace projections is exponential in the number of dimensions, the result is often tremendously large. Recent approaches fail to reduce results to relevant subspace...... clusters. Their results are typically highly redundant, i.e. many clusters are detected multiple times in several projections. In this work, we propose a novel model for relevant subspace clustering (RESCU). We present a global optimization which detects the most interesting non-redundant subspace clusters...... achieves top clustering quality while competing approaches show greatly varying performance....

  6. Isoquercitrin Esters with Mono- or Dicarboxylic Acids: Enzymatic Preparation and Properties

    Science.gov (United States)

    Vavříková, Eva; Langschwager, Fanny; Jezova-Kalachova, Lubica; Křenková, Alena; Mikulová, Barbora; Kuzma, Marek; Křen, Vladimír; Valentová, Kateřina

    2016-01-01

    A series of isoquercitrin (quercetin-3-O-β-d-glucopyranoside) esters with mono- or dicarboxylic acids was designed to modulate hydro- and lipophilicity and biological properties. Esterification of isoquercitrin was accomplished by direct chemoenzymatic reaction using Novozym 435 (lipase from Candida antarctica), which accepted C5- to C12-dicarboxylic acids; the shorter ones, such as oxalic (C2), malonic (C3), succinic (C4) and maleic (C4) acids were not substrates of the lipase. Lipophilicity of monocarboxylic acid derivatives, measured as log P, increased with the chain length. Esters with glutaric and adipic acids exhibited hydrophilicity, and the dodecanedioic acid hemiester was more lipophilic. All derivatives were less able to reduce Folin–Ciocalteau reagent (FCR) and scavenge DPPH (1,1-diphenyl-2-picrylhydrazyl) than isoquercitrin; ABTS (2,2′-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid)) radical-scavenging activity was comparable. Dodecanoate and palmitate were the least active in FCR and ABTS scavenging; dodecanoate and hemiglutarate were the strongest DPPH scavengers. In contrast, most derivatives were much better inhibitors of microsomal lipoperoxidation than isoquercitrin; butyrate and hexanoate were the most efficient. Anti-lipoperoxidant activity of monocarboxylic derivatives, except acetates, decreased with increasing aliphatic chain. The opposite trend was noted for dicarboxylic acid hemiesters, isoquercitrin hemidodecanedioate being the most active. Overall, IQ butyrate, hexanoate and hemidodecanedioate are the most promising candidates for further studies. PMID:27338349

  7. Isoquercitrin Esters with Mono- or Dicarboxylic Acids: Enzymatic Preparation and Properties

    Directory of Open Access Journals (Sweden)

    Eva Vavříková

    2016-06-01

    Full Text Available A series of isoquercitrin (quercetin-3-O-β-d-glucopyranoside esters with mono- or dicarboxylic acids was designed to modulate hydro- and lipophilicity and biological properties. Esterification of isoquercitrin was accomplished by direct chemoenzymatic reaction using Novozym 435 (lipase from Candida antarctica, which accepted C5- to C12-dicarboxylic acids; the shorter ones, such as oxalic (C2, malonic (C3, succinic (C4 and maleic (C4 acids were not substrates of the lipase. Lipophilicity of monocarboxylic acid derivatives, measured as log P, increased with the chain length. Esters with glutaric and adipic acids exhibited hydrophilicity, and the dodecanedioic acid hemiester was more lipophilic. All derivatives were less able to reduce Folin–Ciocalteau reagent (FCR and scavenge DPPH (1,1-diphenyl-2-picrylhydrazyl than isoquercitrin; ABTS (2,2′-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid radical-scavenging activity was comparable. Dodecanoate and palmitate were the least active in FCR and ABTS scavenging; dodecanoate and hemiglutarate were the strongest DPPH scavengers. In contrast, most derivatives were much better inhibitors of microsomal lipoperoxidation than isoquercitrin; butyrate and hexanoate were the most efficient. Anti-lipoperoxidant activity of monocarboxylic derivatives, except acetates, decreased with increasing aliphatic chain. The opposite trend was noted for dicarboxylic acid hemiesters, isoquercitrin hemidodecanedioate being the most active. Overall, IQ butyrate, hexanoate and hemidodecanedioate are the most promising candidates for further studies.

  8. Blending Rigor and Relevance

    Science.gov (United States)

    Siri, Diane K.; Zinner, Jane; Lezin, Nicole

    2011-01-01

    A collaborative at several sites across the state of California will offer evidence of how successful linked learning, which connects academics to real-world work, can be. This article presents examples that illustrate the powerful connections and linkages that are generated by combining academic rigor with the relevance of applying learning to…

  9. Is Information Still Relevant?

    Science.gov (United States)

    Ma, Lia

    2013-01-01

    Introduction: The term "information" in information science does not share the characteristics of those of a nomenclature: it does not bear a generally accepted definition and it does not serve as the bases and assumptions for research studies. As the data deluge has arrived, is the concept of information still relevant for information…

  10. The Relevance of Literature.

    Science.gov (United States)

    Dunham, L. L.

    1971-01-01

    The "legacy" of the humanities is discussed in terms of relevance, involvement, and other philosophical considerations. Reasons for studying foreign literature in language classes are developed in the article. Comment is also made on attitudes and ideas culled from the writings of Clifton Fadiman, Jean Paul Sartre, and James Baldwin. (RL)

  11. One-pot green synthesis of biologically relevant novel spiro[indolin-2-one-3,4'-pyrano[2,3-c]pyrazoles] and studies on their spectral and X-ray crystallographic behaviors.

    Science.gov (United States)

    Sharma, Sakshi; Brahmachari, Goutam; Kant, Rajni; Gupta, Vivek K

    2016-06-01

    Syntheses via green route and single-crystal X-ray structural investigations have been carried out for three spiro[indolin-2-one-3,4'-pyrano[2,3-c]pyrazole] derivatives, 6'-amino-2-oxo-3'-propyl-2'H-spiro[indoline-3,4'-pyrano[2,3-c]pyrazole]-5'-carbonitrile dimethyl sulfoxide monosolvate (5a), 6'-amino-5-fluoro-2-oxo-3'-propyl-2'H-spiro[indoline-3,4'-pyrano[2,3-c]pyrazole]-5'-carbonitrile dimethyl sulfoxide monosolvate (5b) and methyl 6'-amino-5-cyano-1-methyl-2-oxo-3'-propyl-2'H-spiro[indoline-3,4'-pyrano[2,3-c]pyrazole]-3'-carboxylate 0.25 hydrate (5c), respectively. Compounds (5a) and (5b) crystallize in the triclinic space group P\\bar 1, whereas compound (5c) crystallizes in the monoclinic space group C2/c. In molecules (5a) and (5b) all the rings are practically flat, while in (5c), the heterocyclic pyran ring adopts a flattened-boat conformation. In (5a) and (5b) the cyanide group is oriented in a (-ap) conformation, while the amino group is oriented in a (+ap) conformation with a pyran ring, but in (5c) both the cyanide and amino groups are oriented in a (-ap) conformation with the pyran ring. In the crystal structure of (5a) and (5b), the molecules are linked by an elaborate system of N-H...O and N-H...N hydrogen bonds to generate a zigzag-like construct. In (5c) molecules are linked by N-H...O hydrogen bonds, thereby generating extended chains. The present communication focuses on the detailed and comparative information about spectral behaviors, single-crystal X-ray crystallographic properties and solid-state supramolecular architectures of these synthesized compounds of potential biological interests. PMID:27240765

  12. Research on the Relevance between Job Burnout and Anxiety and Their Biological Basis%职业倦怠与焦虑的相关性及其生物学基础研究

    Institute of Scientific and Technical Information of China (English)

    刘姣姣; 奚耕思; 刘倩; 薛丽娟

    2012-01-01

    Burnout of employees is a popular social psychological phenomenon, and its mechanism may mainly be due to the same long-term excessive stress-related nervous system disorders. Burnout and anxiety are closely related with each other and both are regulated by the nervous system and endocrine system. The abnormalities of neurotransmitters and relevant receptors in nervous system such as 5-hydroxytryptamine, norepinephrine and dopamine may lead to anxiety, and further to induce burnout. This paper was expounded the occurrence of job burnout and anxiety in the aspects of hormone level, molecular level and gene level, as well as the interaction of the two. It provided some biomedicine related basic theories for job burnout psychological prevention and gene therapy, and also laid biomedicine related foundation for the research of the mechanism of the causes of anxiety for the job burnout-sensitive crowd, especially for the female job burnout-sensitive crowd.%职业倦怠作为当前社会从业人员普遍存在的心理现象,其生理机制主要与长期过度应激引起神经系统的紊乱相关,焦虑与职业倦怠关系密切,都受到神经系统和内分泌系统共同调节.神经系统中神经递质及其受体:如5-羟色胺,去甲肾上腺素和多巴胺的异常,导致焦虑的发生,可能诱发了职业倦怠.本文从激素水平、分子水平、基因水平三个方面分别阐述了职业倦怠发生和焦虑发生的机制以及两者之间相互作用的生物原理,为今后职业倦怠的心理预防以及基因治疗提供了生物医学研究相关的基础理论,也为职业倦怠易感人群,尤其是女性易感人群的焦虑情绪产生的机制研究奠定了详尽的生物医学方面的基础.

  13. Separation of mono- and di-PEGylate of exenatide and resolution of positional isomers of mono-PEGylates by preparative ion exchange chromatography.

    Science.gov (United States)

    Nguyen, Ngoc-Thanh Thi; Lee, Jae Sun; Yun, Soi; Lee, E K

    2016-07-29

    Exenatide is a synthetic version of the 39-mer peptide of Exendin-4, which is an FDA-approved therapeutic against Type II diabetes mellitus. However, exenatide has a very short in-serum half-life and PEGylation have been performed to improve its in-serum stability. PEGylation often yields multivalent binding to non-specific residues, and the desired species should be carefully separated by chromatographies. In this study, we first devised an aqueous-phase, two-step PEGylation process. This consists of thiolation of Lys 12 and 27 residues followed by attachment of PEG-maleimide (10kD) to thiol groups. This process yields various species: mono-PEGylates with positional isomers, di-PEGylate, and other higher MW substances. A prep-grade cationic exchange chromatography (HiTrap SP) at pH 3.0 partially separated mono- and di-PEGylates based on the molar ratio of conjugated PEG and peptide and thus molecular weight of the conjugates. To further investigate the chromatographic separation of positional isomers of mono-PEGylates, we prepared two kinds of exenatide analogs by point mutation; K12C and K27C. Each analog was mono-PEGylated with very high yield (>95%). When a mixture of the two positional isomers of mono-PEGylates was applied to HiTrap SP chromatography, K12C-PEGylate and K27C-PEGylate eluted separately at 0.22M and 0.33M NaCl, respectively. When the proportions of acid and its conjugate base of the amino acid residues adjacent to the PEGylation site at pH 3.0 were analyzed, K27C-PEGylate shows stronger positive charge than K12C-PEGylate, and we propose the residence time difference between the two mono-PEGylates could be due to the charge difference. ELISA result shows that the immuno-binding activity of both analogs and their mono-PEGylates are well maintained. Furthermore, both mono-PEGylates of the analogs show higher than 50-fold improved anti-trypsin stability. We expect that mono-PEGylates of the exenatide analogs are alternatives to the conventional C40

  14. A comparative hospital-based observational study of mono- and co-infections of malaria, dengue virus and scrub typhus causing acute undifferentiated fever.

    Science.gov (United States)

    Ahmad, S; Dhar, M; Mittal, G; Bhat, N K; Shirazi, N; Kalra, V; Sati, H C; Gupta, V

    2016-04-01

    Positive serology for dengue and/or scrub typhus infection with/without positive malarial smear (designated as mixed or co-infection) is being increasingly observed during epidemics of acute undifferentiated febrile illnesses (AUFIs). We planned to study the clinical and biochemical spectrum of co-infections with Plasmodium sp., dengue virus and scrub typhus and compare these with mono-infection by the same organisms. During the period from December 2012 to December 2013, all cases presenting with AUFIs to a single medical unit of a referral centre in Garhwal region of the north Indian state of Uttarakhand were retrospectively selected and categorised aetiologically as co-infections, malaria, dengue or scrub typhus. The groups thus created were compared in terms of demographic, clinical, biochemical and outcome parameters. The co-infection group (n = 49) was associated with milder clinical manifestations, fewer, milder and non-progressive organ dysfunction, and lesser need for intensive care, mechanical ventilation and dialysis as compared to mono-infections. When co-infections were sub-grouped and compared with the relevant mono-infections, there were differences in certain haematological and biochemical parameters; however, this difference did not translate into differential outcomes. Scrub typhus mono-infection was associated with severe disease in terms of both morbidity and mortality. Malaria, dengue and scrub typhus should be routinely tested in all patients with AUFIs. Co-infections, whether true or due to serological cross-reactivity, appear to be a separate entity so far as presentation and morbidity is concerned. Further insight is needed into the mechanism and identification of the protective infection. PMID:26851948

  15. 职业倦怠与抑郁症的相关性及其生物学基础研究%The Relevence of Occupational Burnout and Depression in Biology Basis

    Institute of Scientific and Technical Information of China (English)

    薛立娟; 奚耕思; 刘倩; 刘姣姣

    2012-01-01

    Occupational burnout and depression which are similar to each other, are important factors and illness for influence mental health. Occupation burnout mainly displays in three aspects-emotional exhaustion, depersonalization and lack of personal accomplishment. Depression is mainly reflected in the mood disorder or affective disorder, lack of passion. Occupation burnout and depression have certain association in the performance aspect. The people who have occupational burnout and depression,usually have passive attitude, low selfevaluation and are lack of life and working enthusiasm, which will affect the quality of work and life. Depression lead to burnout, burnout cause to depression, too. They interact each other. This paper will analyze the relation between them according to the concept of occupational burnout and depression, relationship and biology basis.%职业倦怠和抑郁症是当今社会人群中普遍存在的影响心理健康的重要因素和疾病,这两者之间有一定的相关性.职业倦怠主要表现在三个方面:情感枯竭,去个性化,个人成就感缺乏.抑郁症主要表现在心境障碍或情感性障碍,缺乏激情.职业倦怠和抑郁症在表现行为方面存在一定关联,患有职业倦怠和抑郁症的人通常态度消极,缺乏对生活和工作的热情,自我评价低,影响工作和生活质量.抑郁情绪易引发职业倦怠,职业倦怠也可以导致抑郁症,二者相互影响.本文就职业倦怠与抑郁症的概念,两者之间的联系及相关的生物学基础进行了综述.

  16. Clinical Relevance of Adipokines

    Directory of Open Access Journals (Sweden)

    Matthias Blüher

    2012-10-01

    Full Text Available The incidence of obesity has increased dramatically during recent decades. Obesity increases the risk for metabolic and cardiovascular diseases and may therefore contribute to premature death. With increasing fat mass, secretion of adipose tissue derived bioactive molecules (adipokines changes towards a pro-inflammatory, diabetogenic and atherogenic pattern. Adipokines are involved in the regulation of appetite and satiety, energy expenditure, activity, endothelial function, hemostasis, blood pressure, insulin sensitivity, energy metabolism in insulin sensitive tissues, adipogenesis, fat distribution and insulin secretion in pancreatic β-cells. Therefore, adipokines are clinically relevant as biomarkers for fat distribution, adipose tissue function, liver fat content, insulin sensitivity, chronic inflammation and have the potential for future pharmacological treatment strategies for obesity and its related diseases. This review focuses on the clinical relevance of selected adipokines as markers or predictors of obesity related diseases and as potential therapeutic tools or targets in metabolic and cardiovascular diseases.

  17. Translation and relevance

    OpenAIRE

    Gutt, E. A.

    1989-01-01

    In this study I argue that the phenomenon commonly referred to as "translation" can be accounted for naturally within the relevance theory of communication developed by Sperber and Wilson: there is no need for a distinct general theory of translation. Most kinds of translation can be analysed as varieties of Interpretive use. I distinguish direct from indirect translation, where direct translation corresponds to the idea that translation should convey the same meaning ...

  18. MIND AND RELEVANCE

    OpenAIRE

    MIGUEL ÁNGEL PÉREZ JIMÉNEZ

    2006-01-01

    The paper is an introduction to some problems of the contemporary Philosophy of Mind. The thesis isthat a conceptual study of the psychological expressions in ordinary language could be relevant in ourscientific-oriented times. The scientific point of view in psychology could lead us to forget the value ofunderstanding the mental for every person in his or her daily life, beside the scientific explanations that atheorist could provide. The first part of the paper is an exposition of some epis...

  19. Perspectives on Social Relevance

    OpenAIRE

    Jayasundra-Smits, Shyamika

    2014-01-01

    markdownabstract__Abstract__ During the recently held expert meeting entitled “Social impact @ sciences: Why does Science matter?” organised by the International Institute of Social Studies of Erasmus University Rotterdam, an invited group of participants from academia, NGOs, ministries and the media shared their experiences, their perspectives and their concerns on a number of topics on the theme of social impact and the societal relevance of social science research. The meeting was conducte...

  20. Biological Threats

    Science.gov (United States)

    ... Workplace Plans School Emergency Plans Main Content Biological Threats Biological agents are organisms or toxins that can ... for Disease Control and Prevention . Before a Biological Threat Unlike an explosion, a biological attack may or ...

  1. High pressure behaviour of heavy rare earth mono antimonides

    International Nuclear Information System (INIS)

    We have investigated theoretically the high-pressure structural phase transition and cohesive properties of two heavy rare earth mono antimonides (RESb; RE = Dy and Lu) by using two body interionic potential with necessary modifications to include the effect of Coulomb screening by the delocalized 4f electrons of the RE ion. The peculiar properties of these compounds have been interpreted in terms of the hybridization of f electrons with the conduction band and strong mixing of f states of RE ion with the p orbital of neighboring pnictogen ion. These compounds exhibit first order crystallographic phase transition from their NaCl (B1) phase to CsCl (B2) phase at 23.6 GPa and 25.4 GPa respectively. The bulk modulii of RESb compounds are obtained from the P-V curve fitted by the Birch equation of state. We also calculated the RE-RE distance as a function of pressure. Elastic properties of these compounds have also been studied and their second order elastic constants are calculated.

  2. Adding Mono- and Multivalent Ions to Lyotropic Chromonic Liquid Crystals

    Science.gov (United States)

    Tortora, Luana; Park, Heung-Shik; Antion, Kelly; Woolwerton, Chris; Finotello, Daniele; Lavrentovich, Oleg

    2006-03-01

    Lyotropic Chromonic Liquid Crystals (LCLCs) are a distinct class of liquid crystals formed in aqueous solutions by molecules with rigid polyaromatic cores and ionic groups at the periphery [1-4]. The phase diagrams of these materials should depend on entropic factors (as in the Onsager model) and electrostatic interactions. Using optical polarizing microscopy, we studied the effects of mono- and multivalent ions on the phase diagrams of Blue 27 [3] and Sunset Yellow [2]. The monovalent ions change the temperatures of phase transitions, as described in [4], while the effect of multivalent ions is more dramatic and, in addition to the changed temperatures of phase transitions by tens of degrees, it often involves condensation of LCLC aggregates into domains with birefringence much higher than that in a normal nematic phase. Work supported by OBR B-7844. [1]J. Lydon, Current Opin. Colloid & Interface Sci. 3, 458 (1998);8, 480-489 (2004); [2]V. R. Horowitz, L. A. Janowitz, A. L. Modic, P. J. Heiney, and P. J. Collings, 2005, Phys. Rew. E 72, 041710; [3]Yu. A. Nastishin, H. Liu, T. Schneider, T., V. Nazarenko, R. Vasyuta, S. V. Shiyanovskii, and O. D. Lavrentovich, 2005, Phys. Rev. E 72, 041711; [4]A.F. Kostko, B. H. Cipriano, O. A. Pinchuk, L. Ziserman, M. A. Anisimov, D. Danino, and S. R. Raghavan. J. Phys. Chem. B 109, 19126-19133 (2005)

  3. THE RECOGNITION OF SPOKEN MONO-MORPHEMIC COMPOUNDS IN CHINESE

    Directory of Open Access Journals (Sweden)

    Yu-da Lai

    2012-12-01

    Full Text Available This paper explores the auditory lexical access of mono-morphemic compounds in Chinese as a way of understanding the role of orthography in the recognition of spoken words. In traditional Chinese linguistics, a compound is a word written with two or more characters whether or not they are morphemic. A monomorphemic compound may either be a binding word, written with characters that only appear in this one word, or a non-binding word, written with characters that are chosen for their pronunciation but that also appear in other words. Our goal was to determine if this purely orthographic difference affects auditory lexical access by conducting a series of four experiments with materials matched by whole-word frequency, syllable frequency, cross-syllable predictability, cohort size, and acoustic duration, but differing in binding. An auditory lexical decision task (LDT found an orthographic effect: binding words were recognized more quickly than non-binding words. However, this effect disappeared in an auditory repetition and in a visual LDT with the same materials, implying that the orthographic effect during auditory lexical access was localized to the decision component and involved the influence of cross-character predictability without the activation of orthographic representations. This claim was further confirmed by overall faster recognition of spoken binding words in a cross-modal LDT with different types of visual interference. The theoretical and practical consequences of these findings are discussed.

  4. On the mono-exponential fitting of phosphorescence decays

    Science.gov (United States)

    Fuhrmann, N.; Brübach, J.; Dreizler, A.

    2014-08-01

    Several methods for mono-exponential fitting of decay curves are presented and compared among each other in terms of precision, accuracy and computational time. Simulated noisy data sets are generated and evaluated in order to determine the main contributors to a loss in performance. The influence of the temporal discretization of the decay curve on the precision of the fitting methods is discussed. Correlations between the background offset and the decay time are analyzed. Variations of the signal-to-noise ratio are shown, allowing for evaluation of systematic errors and precision in the presence of noise. Finally, the algorithms are applied to experimental data, and the computational efforts for the different algorithms are compared. The results of this latter investigation confirm the conclusions drawn from the simulated data and the following conclusions are drawn: The frequently applied method of performing a linear regression to the logarithm of a background-corrected decay showed systematic errors in the presence of noise. Best results in terms of precision and accuracy were obtained by a nonlinear least-squares approximation and a method denoted as the linear regression of the sum. Additionally, this latter method required the lowest computational time and is finally recommended for determining decay times from experimental data.

  5. Antioxidant and cytotoxic activity of mono- and bissalicylic acid derivatives

    Directory of Open Access Journals (Sweden)

    Đurendić Evgenija A.

    2014-01-01

    Full Text Available A simple synthesis of mono- and bis-salicylic acid derivatives 1-10 by the transesterification of methyl salicylate (methyl 2-hydroxybenzoate with 3-oxapentane-1,5-diol, 3,6- dioxaoctane-1,8-diol, 3,6,9-trioxaundecane-1,11-diol, propane-1,2-diol or 1-aminopropan- 2-ol in alkaline conditions is reported. All compounds were tested in vitro on three malignant cell lines (MCF-7, MDA-MB-231, PC-3 and one non-tumor cell line (MRC- 5. Strong cytotoxicity against prostate PC-3 cancer cells expressed compounds 3, 4, 6, 9 and 10, all with the IC50 less than 10 μmol/L, which were 11-27 times higher than the cytotoxicity of antitumor drug doxorubicin. All tested compounds were not toxic against the non-tumor MRC-5 cell line. Antioxidant activity of the synthesized derivatives was also evaluated. Compounds 2, 5 and 8 were better OH radical scavengers than commercial antioxidants BHT and BHA. The synthesized compounds showed satisfactory scavenger activity, which was studied by QSAR modeling. A good correlation between the experimental variables IC50 DPPH and IC50 OH and MTI (molecular topological indices molecular descriptors and CAA (accessible Connolly solvent surface area for the new compounds 1, 3, and 5 was observed.

  6. Determination of mono ethanolamine by non-suppressed ion chromatography

    International Nuclear Information System (INIS)

    Mono ethanol amine (MEA) is world wide used as all volatile treatment agent to maintain alkaline pH in the entire steam water circuit of nuclear power station. Spectrophotometric method of MEA analysis suffers from interference in presence of hydrazine which is used as oxygen scavenger. A simple, rapid, accurate and quantitative determination of monoethanolamine (MEA) in coolant water was accomplished by cation exchange chromatography with conductometric detection in non-suppressed mode. A Metrosep cation 1-2 analytical column connecting with a Metrosep cartridge was used for cation separation. A solution containing a mixture of 4 mM tartaric acid, 1 mM dipicolinic acid, 20% acetone and 0.05 mM HNO3 was used as eluent. The limit of detection for MEA was 0.1 μg ml-1 and relative standard deviation was 2% for the overall method. The method was applied for the determination of MEA in steam generator water sample without any interference of hydrazine. The recovery was in the range of 95-102%. (author)

  7. The microbial arsenic cycle in Mono Lake, California.

    Science.gov (United States)

    Oremland, Ronald S; Stolz, John F; Hollibaugh, James T

    2004-04-01

    Significant concentrations of dissolved inorganic arsenic can be found in the waters of a number of lakes located in the western USA and in other water bodies around the world. These lakes are often situated in arid, volcanic terrain. The highest concentrations of arsenic occur in hypersaline, closed basin soda lakes and their remnant brines. Although arsenic is a well-known toxicant to eukaryotes and prokaryotes alike, some prokaryotes have evolved biochemical mechanisms to exploit arsenic oxyanions (i.e., arsenate and arsenite); they can use them either as an electron acceptor for anaerobic respiration (arsenate), or as an electron donor (arsenite) to support chemoautotrophic fixation of CO(2) into cell carbon. Unlike in freshwater or marine ecosystems, these processes may assume quantitative significance with respect to the carbon cycle in arsenic-rich soda lakes. For the past several years our research has focused on the occurrence and biogeochemical manifestations of these processes in Mono Lake, a particularly arsenic-rich environment. Herein we review some of our findings concerning the biogeochemical arsenic cycle in this lake, with the hope that it may broaden the understanding of the influence of microorganisms upon the speciation of arsenic in more common, less "extreme" environments, such as drinking water aquifers. PMID:19712427

  8. Mono- and di-cationic hydrido boron compounds.

    Science.gov (United States)

    Ghadwal, Rajendra S; Schürmann, Christian J; Andrada, Diego M; Frenking, Gernot

    2015-08-28

    Brønsted acid HNTf2 (Tf = SO2CF3) mediated dehydrogenative hydride abstraction from (L(1))BH3 () and (L(2))BH3 () (L(1) = IPrCH2 = 1,3-(2,6-di-isopropylphenyl)imidazol-2-methylidene (); L(2) = SIPrCH2 = 1,3-(2,6-di-isopropylphenyl)imidazolidin-2-methylidiene ()) affords thermally stable hydride bridged mono-cationic hydrido boron compounds [{(L(1))BH2}2(μ-H)](NTf2) () and [{(L(2))BH2}2(μ-H)](NTf2) (). Furthermore, hydride abstraction yields di-cationic hydrido boron compounds [{(L(1))BH}2(μ-H)2](NTf2)2 () and [{(L(2))BH}2(μ-H)2](NTf2)2 (). Unique cationic boron compounds with CH2BH2(μ-H)BH2CH2 ( and ) and CH2BH(μ-H)2BHCH2 ( and ) moieties feature a 3c-2e bond and have been fully characterized. Interesting electronic and structural features of compounds are analysed using spectroscopic, crystallographic, and computational methods. PMID:26200103

  9. Mono-THF ring annonaceous acetogenins from Annona squamosa.

    Science.gov (United States)

    Hopp, D C; Alali, F Q; Gu, Z M; McLaughlin, J L

    1998-03-01

    Continuing work on the bark of Annona squamosa Rich. (Annonaceae), directed by the brine shrimp lethality test (BST), has resulted in the isolation of three new Annonaceous acetogenins, 4-deoxyannoreticuin, cis-4-deoxyannoreticuin, and (2,4-cis and trans)-squamoxinone. The first two are additional examples of acetogenins isolated from this plant species which contain the unusual feature of an oxygen functionality at the C-9 position. They have a hydroxylated mono-THF ring with respective threo/trans/threo and threo/cis/threo relative stereochemistries. The latter compound is a ketolactone mixture which has the same relative stereochemistry around the THF ring and the same spatial relationship between the THF ring and the hydroxyl group along the aliphatic chain as 4-deoxyannoreticuin, but is two methylene units longer. Additionally, the isolated hydroxyl group is at C-11, while the THF ring starts at C-17, instead of at C-9 and C-15, respectively, as for the first two compounds. All three compounds showed moderate, but significant, cytotoxicities against a panel of six human tumor cell lines with (2,4 cis and trans)-squamoxinone showing promising selectivity against the pancreatic cell line (PACA-2). PMID:9542173

  10. DECHLORINATION ACTIVITY (CROSS-ACCLIMATION) OF FRESHWATER SEDIMENTS ADAPTED TO MONO- AND DI-CHLOROPHENOLS

    Science.gov (United States)

    The reductive dechlorination of chlorophenols (CPs) in sediment slurries (10% solids) adapted to dechlorinate mono- and di-CPs (DCP) was investigated to define the regiospecificity of the dechlorination reaction. nadapted sediment slurries amended with various ortho-substituted C...

  11. IRIS Toxicological Review of Ethylene Glycol Mono-Butyl Ether (EGBE) (Interagency Science Discussion Draft)

    Science.gov (United States)

    EPA is releasing the draft report, Toxicological Review for Ethylene Glycol Mono-Butyl Ether , that was distributed to Federal agencies and White House Offices for comment during the Science Discussion step of the IRIS Assessme...

  12. Developing C# Apps for iPhone and iPad using MonoTouch

    CERN Document Server

    Costanich, Bryan

    2011-01-01

    Developing C# Applications for iPhone and iPad using MonoTouch shows you how to use your existing C# skills to write apps for the iPhone and iPad. Fortunately, there's MonoTouch, Novell's .NET library that allows C# developers to write C# code that executes in iOS. Furthermore, MonoTouch allows you to address all the unique functions of the iPhone, iPod Touch, and iPad. And the big plus: You needn't learn any Objective-C to master MonoTouch!. Former Microsoft engineer and published app-store developer Bryan Costanich shows you how to use the tools you already know to create native apps in iOS

  13. Geothermal systems of the Mono Basin-Long Valley region, eastern California and western Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Higgins, C.T.; Flynn, T.; Chapman, R.H.; Trexler, D.T.; Chase, G.R.; Bacon, C.F.; Ghusn, G. Jr.

    1985-01-01

    The region that includes Mono Basin, Long Valley, the Bridgeport-Bodie Hills area, and Aurora, in eastern California and western Nevada was studied to determine the possible causes and interactions of the geothermal anomalies in the Mono Basin-Long Valley region as a whole. A special goal of the study was to locate possible shallow bodies of magma and to determine their influence on the hydrothermal systems in the region. (ACR)

  14. Mono-chlorophenol degradation by pseudomonas putida CP1 and a mixed microbial population

    OpenAIRE

    Farrell, Alan

    2000-01-01

    A commercial mixed culture, Biolyte HAB, degraded mono-chlorophenols using a metci- cleavage pathway. 2- and 3-chlorophenol degradation was incomplete, leading to the accumulation of dead-end metabolites. Biolyte HAB was capable of the complete degradation of 2.34 mM 4-chlorophenol, via the intermediate 5-chloro-2- hydroxymuconic semialdehyde, using the meta- cleavage pathway. Pseudomonas putida CPI degraded mono-chlorophenols to completion via an orthocleavage pathway. The ability of P. ...

  15. Stochastic resonance in a mono-stable system with multiplicative and additive noise

    International Nuclear Information System (INIS)

    The stochastic resonance in a biased mono-stable system subject to multiplicative and additive noise is investigated. Based on the adiabatic approximation theory, the analytic expression of the signal-to-noise ratio (SNR) is obtained. It is shown that the SNR is a non-monotonic function of the intensities of the multiplicative and additive noise, as well as the parameters of the mono-stable system

  16. Implementasi Secure Hash Algorithm (SHA) Dan Substitusi Mono Alfabet Dalam Sistem Pengamanan Data

    OpenAIRE

    Raja Salomo Tarigan

    2009-01-01

    Penggunaan data digital dalam dunia sekarang ini sudah meliputi hampir semua aspek. Salah satu upaya pengamanan data digital yang dapat dilakukan adalah kriptografi. Teknik kriptografi klasik seperti Substitusi Mono Alphabet tidak pernah digunakan lagi karena tidak dapat menyaingi kompleksitas teknik kriptografi yang lain oleh karena kesederhanaannya. Oleh karena itu timbul suatu gagasan untuk menggunakan kembali algoritma kriptografi klasik seperti Substitusi Mono Alphabet dengan cara mengga...

  17. Proses Pembuatan Mono-Digliserida (MDG) dari Refined Bleached Deodorized Palm Oil (RBDPO) Secara Gliserolisis Enzimatis

    OpenAIRE

    Zakwan

    2016-01-01

    ZAKWAN. The Catalyzed Enzymatic Glycerolysis Process of Refined Bleached Deodorized Palm Oil for the Mono-diglyceride Synthesis. Supervised Elisa Julianti and Zulkifli Lubis. Indonesia is one of the largest palm oil producing countries in the world and the production is still increasing; therefore, product diversifications should be done to obtain higher added value to Indonesia. One of the potential products is palm based emulsifier. Mono-diglyceride (MDG) is the mostly used emulsifier in...

  18. Synthesis of Yttrium and Aluminum Complexes Supported by a Mono-Substituted Ferrocene Ligand

    OpenAIRE

    Gao, Jun

    2015-01-01

    Ferrocene chelating ligands provide good stability of the resulting metal complexes and redox-switchable control in chemical processes catalyzed by those complexes. In comparison to traditional di-substituted ferrocene tetradentate ligands, mono-substituted tridentate ferrocene ligands may form metal complexes with a more open coordination sphere around the metal center that may allow an increased preference for substrate coordination. In addition, a mono-substituted ferrocene ligand allows t...

  19. Good quality blastocyst from non-/mono-pronuclear zygote may be used for transfer during IVF.

    Science.gov (United States)

    Yin, Bao-Li; Hao, Hao-Ying; Zhang, Ya-Nan; Wei, Duo; Zhang, Cui-Lian

    2016-04-01

    Although healthy infants have developed from non- and mono-pronuclear zygotes, the transfer of embryos from non- and mono-pronuclear zygotes is not recommended because there are no proper selection criteria. In the present study, we discuss how to select non- and mono-pronuclear embryos with the highest developmental potential at 19-20 hours post-insemination. We found that the percentage of blastocysts with normal chromosome constitution in non-pronuclear zygotes was slightly higher than in mono-pronuclear zygotes. Non- and mono-pronuclear embryos that were at the 4-cell stage on D2 and/or at the 6- to 8-cell stage on D3 had higher incidence rates of blastocysts with normal chromosome constitutions. We also found higher incidences of blastocysts with normal chromosome constitution on D6 than on D5. The results suggest that if high quality non- and mono-pronuclear zygotes develop to the 4-cell stage on D2 and the 6-to 8- cell stages on D3, along with high quality D6 blastocysts, the incidence of blastocysts with normal chromosome constitution is higher. PMID:26901373

  20. Mono- and multistatic polarimetric sparse aperture 3D SAR imaging

    Science.gov (United States)

    DeGraaf, Stuart; Twigg, Charles; Phillips, Louis

    2008-04-01

    SAR imaging at low center frequencies (UHF and L-band) offers advantages over imaging at more conventional (X-band) frequencies, including foliage penetration for target detection and scene segmentation based on polarimetric coherency. However, bandwidths typically available at these center frequencies are small, affording poor resolution. By exploiting extreme spatial diversity (partial hemispheric k-space coverage) and nonlinear bandwidth extrapolation/interpolation methods such as Least-Squares SuperResolution (LSSR) and Least-Squares CLEAN (LSCLEAN), one can achieve resolutions that are commensurate with the carrier frequency (λ/4) rather than the bandwidth (c/2B). Furthermore, extreme angle diversity affords complete coverage of a target's backscatter, and a correspondingly more literal image. To realize these benefits, however, one must image the scene in 3-D; otherwise layover-induced misregistration compromises the coherent summation that yields improved resolution. Practically, one is limited to very sparse elevation apertures, i.e. a small number of circular passes. Here we demonstrate that both LSSR and LSCLEAN can reduce considerably the sidelobe and alias artifacts caused by these sparse elevation apertures. Further, we illustrate how a hypothetical multi-static geometry consisting of six vertical real-aperture receive apertures, combined with a single circular transmit aperture provide effective, though sparse and unusual, 3-D k-space support. Forward scattering captured by this geometry reveals horizontal scattering surfaces that are missed in monostatic backscattering geometries. This paper illustrates results based on LucernHammer UHF and L-band mono- and multi-static simulations of a backhoe.

  1. OVERVIEW OF MONO-ENERGETIC GAMMA-RAY SOURCES & APPLICATIONS

    Energy Technology Data Exchange (ETDEWEB)

    Hartemann, F V; Albert, F; Anderson, G G; Anderson, S G; Bayramian, A J; Betts, S M; Chu, T S; Cross, R R; Ebbers, C A; Fisher, S E; Gibson, D J; Ladran, A S; Marsh, R A; Messerly, M J; O' Neill, K L; Semenov, V A; Shverdin, M Y; Siders, C W; McNabb, D P; Barty, C P; Vlieks, A E; Jongewaard, E N; Tantawi, S G; Raubenheimer, T O

    2010-05-18

    Recent progress in accelerator physics and laser technology have enabled the development of a new class of tunable gamma-ray light sources based on Compton scattering between a high-brightness, relativistic electron beam and a high intensity laser pulse produced via chirped-pulse amplification (CPA). A precision, tunable Mono-Energetic Gamma-ray (MEGa-ray) source driven by a compact, high-gradient X-band linac is currently under development and construction at LLNL. High-brightness, relativistic electron bunches produced by an X-band linac designed in collaboration with SLAC NAL will interact with a Joule-class, 10 ps, diode-pumped CPA laser pulse to generate tunable {gamma}-rays in the 0.5-2.5 MeV photon energy range via Compton scattering. This MEGa-ray source will be used to excite nuclear resonance fluorescence in various isotopes. Applications include homeland security, stockpile science and surveillance, nuclear fuel assay, and waste imaging and assay. The source design, key parameters, and current status are presented, along with important applications, including nuclear resonance fluorescence. In conclusion, we have optimized the design of a high brightness Compton scattering gamma-ray source, specifically designed for NRF applications. Two different parameters sets have been considered: one where the number of photons scattered in a single shot reaches approximately 7.5 x 10{sup 8}, with a focal spot size around 8 {micro}m; in the second set, the spectral brightness is optimized by using a 20 {micro}m spot size, with 0.2% relative bandwidth.

  2. Synthetic biology, inspired by synthetic chemistry

    OpenAIRE

    Malinova, V; Nallani, M.; Meier, W. P.; Sinner, E. K.

    2012-01-01

    The topic synthetic biology appears still as an 'empty basket to be filled'. However, there is already plenty of claims and visions, as well as convincing research strategies about the theme of synthetic biology. First of all, synthetic biology seems to be about the engineering of biology -about bottom-up and top-down approaches, compromising complexity versus stability of artificial architectures, relevant in biology. Synthetic biology accounts for heterogeneous approaches towards minimal an...

  3. MIND AND RELEVANCE

    Directory of Open Access Journals (Sweden)

    MIGUEL ÁNGEL PÉREZ JIMÉNEZ

    2006-05-01

    Full Text Available The paper is an introduction to some problems of the contemporary Philosophy of Mind. The thesis isthat a conceptual study of the psychological expressions in ordinary language could be relevant in ourscientific-oriented times. The scientific point of view in psychology could lead us to forget the value ofunderstanding the mental for every person in his or her daily life, beside the scientific explanations that atheorist could provide. The first part of the paper is an exposition of some epistemological and ontologicaldebates in the Philosophy of Psychology in which we offer many quotations and references to introducethe reader directly, by him or herself, into the study of the issues. The second part exposes an interpretationof Wittgenstein’s philosophy of mind. In the third part, we raise the question about the value of theWittgenstein’s ideas in the context of theoretical psychology debates.

  4. Vygotsky's Crisis: Argument, context, relevance.

    Science.gov (United States)

    Hyman, Ludmila

    2012-06-01

    Vygotsky's The Historical Significance of the Crisis in Psychology (1926-1927) is an important text in the history and philosophy of psychology that has only become available to scholars in 1982 in Russian, and in 1997 in English. The goal of this paper is to introduce Vygotsky's conception of psychology to a wider audience. I argue that Vygotsky's argument about the "crisis" in psychology and its resolution can be fully understood only in the context of his social and political thinking. Vygotsky shared the enthusiasm, widespread among Russian leftist intelligentsia in the 1920s, that Soviet society had launched an unprecedented social experiment: The socialist revolution opened the way for establishing social conditions that would let the individual flourish. For Vygotsky, this meant that "a new man" of the future would become "the first and only species in biology that would create itself." He envisioned psychology as a science that would serve this humanist teleology. I propose that The Crisis is relevant today insofar as it helps us define a fundamental problem: How can we systematically account for the development of knowledge in psychology? I evaluate how Vygotsky addresses this problem as a historian of the crisis. PMID:22520196

  5. Microbiome analysis – from technical advances to biological relevance

    OpenAIRE

    Smith, Michelle I.; Turpin, Williams; Tyler, Andrea D.; Silverberg, Mark S; Croitoru, Kenneth

    2014-01-01

    The development of culture-independent techniques and next-generation sequencing has led to a staggering rise in the number of microbiome studies over the last decade. Although it remains important to identify the taxa of microbes present in a variety of environmental samples, including the gut microbiomes of healthy and diseased individuals, the next stage of microbiome research will need to focus on uncovering the role of the microbiome rather than its mere composition. Here, we introduce t...

  6. Lipid-sugar interaction: Relevance to anhydrous biology

    OpenAIRE

    Caffrey, Martin

    1988-01-01

    PUBLISHED The ability of seeds and other anhydrous plant forms to survive the withdrawal of water must involve a mechanism for protecting the integrity of cellular membranes. Evidence from animal systems implicates sugars as protective components, and we have tested the changes in mesomorphic phase state of phospholipid model membranes upon hydration and dehydration in the presence of sucrose and/or sucrose plus raffinose. X-ray diffraction studies of dry dimyristoylphosphatidylcholine (DM...

  7. Tailor-Made Fluorescent Trilobolide To Study Its Biological Relevance

    Czech Academy of Sciences Publication Activity Database

    Jurášek, M.; Rimpelová, S.; Kmoníčková, Eva; Drašar, P.; Ruml, T.

    2014-01-01

    Roč. 57, č. 19 (2014), s. 7947-7954. ISSN 0022-2623 Grant ostatní: GA ČR(CZ) GA14-28334S; GA MŠMT(CZ) 20/2014 Institutional support: RVO:68378041 Keywords : trilobolide * nitric oxide * endoplasmic reticulum Subject RIV: FR - Pharmacology ; Medidal Chemistry Impact factor: 5.447, year: 2014

  8. Classifying transcription factor targets and discovering relevant biological features

    OpenAIRE

    DeLisi Charles; Kon Mark; Holloway Dustin T

    2008-01-01

    Abstract Background An important goal in post-genomic research is discovering the network of interactions between transcription factors (TFs) and the genes they regulate. We have previously reported the development of a supervised-learning approach to TF target identification, and used it to predict targets of 104 transcription factors in yeast. We now include a new sequence conservation measure, expand our predictions to include 59 new TFs, introduce a web-server, and implement an improved r...

  9. Categorization of biologically relevant chemical signals in the medial amygdala

    OpenAIRE

    Samuelsen, Chad L.; Meredith, Michael

    2009-01-01

    Many species employ chemical signals to convey messages between members of the same species (conspecific), but chemosignals may also provide information to another species (heterospecific). Here, we found that conspecific chemosignals (male, female mouse urine) increased immediate early gene-protein (IEG) expression in both anterior and posterior medial amygdala of male mice, whereas most heterospecific chemosignals (e.g.: hamster vaginal fluid, steer urine) increased expression only in anter...

  10. Annexin A2: biology and relevance to the antiphospholipid syndrome

    OpenAIRE

    Cockrell, E; Espinola, RG; McCrae, KR

    2008-01-01

    Antiphospholipid antibodies (aPL), the majority of which are directed against β2-glycoprotein I (β2GPI), are associated with an increased incidence of venous and arterial thrombosis. The pathogenesis of antiphospholipid/anti-β2GPI-associated thrombosis has not been defined, and is likely multifactorial. However, accumulating evidence suggests an important role for endothelial cell activation with the acquisition of a procoagulant phenotype by the activated endothelial cell. Previous work demo...

  11. Annexin A2: biology and relevance to the antiphospholipid syndrome

    Science.gov (United States)

    Cockrell, E; Espinola, RG; McCrae, KR

    2012-01-01

    Antiphospholipid antibodies (aPL), the majority of which are directed against β2-glycoprotein I (β2GPI), are associated with an increased incidence of venous and arterial thrombosis. The pathogenesis of antiphospholipid/anti-β2GPI-associated thrombosis has not been defined, and is likely multifactorial. However, accumulating evidence suggests an important role for endothelial cell activation with the acquisition of a procoagulant phenotype by the activated endothelial cell. Previous work demonstrated that endothelial activation by antiphospholipid/anti-β2GPI antibodies is β2GPI-dependent. We extended these observations by defining annexin A2 as an endothelial β2GPI binding site. We also observed that annexin A2 plays a critical role in endothelial cell activation induced by anti-β2GPI antibodies, and others have described direct endothelial activation by anti-annexin A2 antibodies in patients with aPL. Similar findings have been reported using human monocytes, which also express annexin A2. Because annexin A2 is not a transmembrane protein, how binding of β2GPI/anti-β2GPI antibodies, or anti-annexin A2 antibodies, to endothelial annexin A2 causes cellular activation is unknown. Recent studies, however, suggest an important role for the Toll-like receptor family, particularly TLR4. In this article, we review the role of these interactions in the activation of endothelial cells by aPL. The influence of these antibodies on the ability of annexin A2 to enhance t-PA-mediated plasminogen activation is also discussed. PMID:18827060

  12. Cooperativity in noncovalent interactions of biologically relevant molecules.

    Science.gov (United States)

    Antony, Jens; Brüske, Björn; Grimme, Stefan

    2009-10-14

    Using a recently published benchmark MP2 database of nucleic acid base trimers, the three-body contribution to the interaction energy (TBE, also termed (non)cooperativity) as a function of base composition and complex geometry is studied. In 28 out of 141 cases (or 20%), the counterpoise-corrected MP2/TZV(2df,2pd) TBE exceeds 1 kcal mol(-1). The TBE is below 1 kcal mol(-1) for all trimers in the benchmark set consisting of U, T, and A, irrespective of the geometrical arrangement in the database. The largest MP2/TZV(2df,2pd) cooperativity of -9 kcal mol(-1) is obtained for a hydrogen-bonded guanine trimer. The largest anti-cooperativity occurs for a protonated cytosine-guanine-cytosine trimer (6 kcal mol(-1)). Generally, the many-body non-additivity term is an order of magnitude smaller than the interaction energies (on average -33 kcal mol(-1)). Employing various density functionals (GGA, meta-GGA, and hybrid) and wave function methods up to third order perturbation theory, and using atomic-orbital basis sets of double-, triple-, and quadruple-zeta quality, we find that the non-additivity effects are almost independent of one particle basis set and method. To enable an interpretation of the TBE, the intermolecular interaction energy is subjected to an energy decomposition analysis (EDA) with a similar definition of the energy terms as the Morokuma decomposition scheme. We find that nonadditive effects are mainly due to the induction, while exchange repulsion, electrostatic, and dispersion contributions are essentially additive, the latter also beyond second order at the MP3/SV(d,p) level. The performance of dispersion-corrected density functional theory for the prediction of structures and binding energies is assessed. While an accurate reproduction of the MP2-optimized reference structures of the trimers can already be accomplished with modern density functionals, only the inclusion of the long-range (London) dispersion interaction provides a consistent picture for both structures and binding energies. PMID:19774274

  13. The Importance of Biologically Relevant Microclimates in Habitat Suitability Assessments

    OpenAIRE

    Johanna Varner; M Denise Dearing

    2014-01-01

    Predicting habitat suitability under climate change is vital to conserving biodiversity. However, current species distribution models rely on coarse scale climate data, whereas fine scale microclimate data may be necessary to assess habitat suitability and generate predictive models. Here, we evaluate disparities between temperature data at the coarse scale from weather stations versus fine-scale data measured in microhabitats required for a climate-sensitive mammal, the American pika (Ochoto...

  14. Kinetics of the phthalate metabolites mono-2-ethylhexyl phthalate (MEHP) and mono-n-butyl phthalate (MnBP) in male subjects after a single oral dose.

    Science.gov (United States)

    Mittermeier, Astrid; Völkel, Wolfgang; Fromme, Hermann

    2016-06-11

    Humans have been exposed to dialkyl ortho-phthalates for decades. Due to degradation the phthalate monoesters, responsible for the toxic effects, are additionally found in environmental media as well as food samples. Nevertheless, the toxicokinetic properties of the monoesters are not known. Therefore, metabolism of the phthalate monoesters mono-2-ethylhexyl phthalate (MEHP) and mono-n-butyl phthalate (MnBP) was studied in four male volunteers (23-58 years of age) after ingestion of a single dose of 50μg/kg bw D4-MEHP or 10μg/kg bw D4-MnBP. The main metabolites in urine were determined up to 46h after administration. In the MEHP-study, more than 90% of each metabolite appeared in the urine within the first 22h, and the average excreted amount of D4-MEHP and its four secondary metabolites was 62% of the administered dose. The highest value of 15% was observed for mono-2-ethyl-5-carboxy-pentyl phthalate (D4-5cx-MEPP). The mean elimination half-life of D4-MEHP was estimated to be 3.5±1.4h. In the MnBP-study, the total recovered values of D4-MnBP and its secondary metabolites ranged from 52% to 130%. The monoester itself, with a half-life of 1.9±0.5h, accounted for the majority of the ingested dose (92%), while the secondary metabolites D4-mono-3-hydroxy-n-butyl phthalate (D4-3OH-MnBP) and D4-3-carboxy-mono-propyl phthalate (D4-3cx-MPP) represented only 7.1% and 1.0% of the ingested dose, respectively. Overall, this study determined that the kinetics of the phthalate monoesters MEHP and MnBP after oral dosage are comparable to the properties of their diesters. PMID:27091076

  15. Homoleptic mono- and dinuclear cationic alkoxydiphosphazane derivatives of rhodium

    International Nuclear Information System (INIS)

    Treatment of the solvento species [Rh(C8H12)(solvent)2][SbF6] (solvent = methanol, ethanol, or tetrahydrofuran) with a twice-molar amount of the diphosphazane ligands (RO)2PN(R') P(OR)2 (R' = Me or Et; R = Me, Et, or Pri) in the appropriate solvent leads to the ready formation of monocationic [Rh{(RO)2PN(R')P(OR)2}2]+ and/or dicationic [Rh2{μ-(RO)2PN(R')P(OR)2}2{(RO)2PN(R')P(OR)2}2]2+ hexafluoroantimonate salts, with the tendency to afford dinuclear derivatives decreasing along the series Me>Et>Pri. Carbon monoxide readily forms addition products with these ionic species, giving rise to five-coordinate derivatives of the type [Rh(CO){(RO)2PN(R')P (OR)2}2][SbF6] in the case of the mononuclear derivatives, and inserting across the two rhodium atoms to afford [Rh2(μ-CO){μ-(MeO)2PN(Et)P(OMe)2}2{(MeO)2PN(Et)P(OMe)2}2][SbF6]2 in the case of [Rh2{μ-(MeO)2PN (Et)P(OMe)2}2{(MeO)2PN(Et)P(OMe)2}2][SbF6]2. These mono- and dicationic derivatives also react readily with iodine affording [RhI2{(RO)2PN(R')P(OR)2}2][SbF6] and [Rh2(μ-I){μ-(MeO)2PN(Et)P(OMe)2}2{(MeO)2 PN(Et)P(OMe)2}2][SbF6]n (n = 2 or 3) respectively. The coordination behaviour of the diphosphorus ligands (MeO)2PCH2P(OMe)2 and Me2PCH2PMe2 towards [Rh(C8 H12)(solvent)2][SbF6] has also been investigated. 1 fig., 1 tab., 19 refs

  16. Enhanced degradation of mono aromatic hydrocarbons in sandy aquifer materials

    Energy Technology Data Exchange (ETDEWEB)

    Corseuil, Henry X. [Santa Catarina Univ., Florianopolis, SC (Brazil). Dept. de Engenharia Sanitaria; Weber Junior, W.J. [Michigan Univ., Ann Arbor, MI (United States). Dept. of Civil and Environmental Engineering

    1993-12-31

    The use of an inoculation technique to enhance rates of in-situ biodegradation of toxic organic contaminants by increasing subsurface populations of specific microorganisms is described. An external biologically active carbon (BAC) adsorber is demonstrated to be an efficient reactor system for collection, acclimation and enrichment of microorganisms for the inoculation process (author). 15 refs., 3 figs.

  17. Mono and Multivalency In Tethered Protein-Carbohydrate Bonds

    Energy Technology Data Exchange (ETDEWEB)

    Ratto, T V; Langry, K C; Rudd, R E; Balhorn, R L; McElfresh, M W

    2004-01-29

    Molecular recognition in biological systems typically involves large numbers of interactions simultaneously. By using a multivalent approach, weak interactions with fairly low specificity can become strong highly specific interactions. Additionally, this allows an organism to control the strength and specificity of an interaction simply by controlling the number of binding molecules (or binding sites), which in turn can be controlled through transcriptional regulation.

  18. Microscopic diagnostics of DNA molecules on mono-crystalline diamond

    Czech Academy of Sciences Publication Activity Database

    Rezek, Bohuslav; Shin, D.; Uetsuka, H.; Nebel, C.E.

    2007-01-01

    Roč. 204, č. 9 (2007), s. 2888-2897. ISSN 0031-8965 Institutional research plan: CEZ:AV0Z10100521 Keywords : atomic force microscopy (AFM) * Lungmuir - Blodgett films on solids * nucleus acid s * biomaterials and biological interfaces Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 1.214, year: 2007

  19. Diazoalkane addition reaction on the fullerene dimer C120O and characterization of the resulting mono-adduct.

    Directory of Open Access Journals (Sweden)

    Uwe Ritter

    2008-06-01

    Full Text Available A mono-adduct of the fullerene dimer C120O was prepared via a diazoalkane addition reaction to obtain rod-like analogue of[60]PCBM opening the possibility to make photovoltaic and photosensitive layers of supra-molecular and anisotropic order.The mono-adduct was obtained as a mixture containing five isomers. The structure of the mono-adduct was verified bymass-, IR-, and 1H-NMR-spectroscopies. The mono-adduct is readily soluble in common fullerene solvents and shows abroader and stronger optical absorption than [60]PCBM. The mono-adduct features a similar acceptor strength as [60]PCBMand [70]PCBM, is stable in air below 150 °C and in nitrogen below 500 °C. The mono-adduct is expected to be a valuablematerial for photovoltaic and photosensitive applications.

  20. Mesoscopic models of biological membranes

    DEFF Research Database (Denmark)

    Venturoli, M.; Sperotto, Maria Maddalena; Kranenburg, M.;

    2006-01-01

    Phospholipids are the main components of biological membranes and dissolved in water these molecules self-assemble into closed structures, of which bilayers are the most relevant from a biological point of view. Lipid bilayers are often used, both in experimental and by theoretical investigations...

  1. Biochemical Properties of a New Cold-Active Mono- and Diacylglycerol Lipase from Marine Member Janibacter sp. Strain HTCC2649

    OpenAIRE

    Dongjuan Yuan; Dongming Lan; Ruipu Xin; Bo Yang; Yonghua Wang

    2014-01-01

    Mono- and di-acylglycerol lipase has been applied to industrial usage in oil modification for its special substrate selectivity. Until now, the reported mono- and di-acylglycerol lipases from microorganism are limited, and there is no report on the mono- and di-acylglycerol lipase from bacteria. A predicted lipase (named MAJ1) from marine Janibacter sp. strain HTCC2649 was purified and biochemical characterized. MAJ1 was clustered in the family I.7 of esterase/lipase. The optimum activity ...

  2. Selective mono-radioiodination and characterization of a cell-penetrating peptide. L-Tyr-maurocalcine

    International Nuclear Information System (INIS)

    Mono-and poly-iodinated peptides form frequently during radioiodination procedures. However, the formation of a single species in its mono-iodinated form is essential for quantitative studies such as determination of tissue concentration or image quantification. Therefore, the aim of the present study was to define the optimal experimental conditions in order to exclusively obtain the mono-iodinated form of L-maurocalcine (L-MCa). L-MCa is an animal venom toxin which was shown to act as a cell-penetrating peptide. In order to apply the current direct radioiodination technique using oxidative agents including chloramine T, Iodo-Gen registered or lactoperoxidase, an analogue of this peptide containing a tyrosine residue (Tyr-L-MCa) was synthesized and was shown to fold/oxidize properly. The enzymatic approach using lactoperoxidase/H2O2 was found to be the best method for radioiodination of Tyr-L-MCa. MALDI-TOF mass spectrometry analyses were then used for identification of the chromatographic eluting components of the reaction mixtures. We observed that the production of different radioiodinated species depended upon the reaction conditions. Our results successfully described the experimental conditions of peptide radioiodination allowing the exclusive production of the mono-iodinated form with high radiochemical purity and without the need for a purification step. Mono-radioiodination of L-Tyr-MCa will be crucial for future quantitative studies, investigating the mechanism of cell penetration and in vivo biodistribution.

  3. MAGNESIUM MONO POTASSIUM PHOSPHATE GROUT FOR P-REACTOR VESSEL IN-SITU DECOMISSIONING

    Energy Technology Data Exchange (ETDEWEB)

    Langton, C.; Stefanko, D.

    2011-01-05

    The objective of this report is to document laboratory testing of magnesium mono potassium phosphate grouts for P-Reactor vessel in-situ decommissioning. Magnesium mono potassium phosphate cement-based grout was identified as candidate material for filling (physically stabilizing) the 105-P Reactor vessel (RV) because it is less alkaline than portland cement-based grout (pH of about 12.4). A less alkaline material ({<=} 10.5) was desired to address a potential materials compatibility issue caused by corrosion of aluminum metal in highly alkaline environments such as that encountered in portland cement grouts. Information concerning access points into the P-Reactor vessel and amount of aluminum metal in the vessel is provided elsewhere. Fresh and cured properties were measured for: (1) commercially blended magnesium mono potassium phosphate packaged grouts, (2) commercially available binders blended with inert fillers at SRNL, (3) grouts prepared from technical grade MgO and KH{sub 2}PO{sub 4} and inert fillers (quartz sands, Class F fly ash), and (4) Ceramicrete{reg_sign} magnesium mono potassium phosphate-based grouts prepared at Argonne National Laboratory. Boric acid was evaluated as a set retarder in the magnesium mono potassium phosphate mixes.

  4. High resolution seismic reflection profiles of Holocene volcanic and tectonic features, Mono Lake, California

    Science.gov (United States)

    Jayko, A. S.; Hart, P. E.; Bursik, M. I.; McClain, J. S.; Moore, J. C.; Boyle, M.; Childs, J. R.; Novick, M.; Hill, D. P.; Mangan, M.; Roeske, S.

    2009-12-01

    The Inyo-Mono Craters of Long Valley and Mono Basin, California are the youngest eruptive vents of the Great Basin, USA and the second youngest in California. They are one of two seismically active volcanic centers with geothermal power production in the Walker Lane, western Great Basin, the other being the Coso Volcanic Field to the south. High resolution seismic reflection data collected from the northern tip of the Mono Craters eruptive centers in Mono Lake delinates two structural zones proximal to the active volcanic centers in Mono Lake. A growth structure drapped by ~30 m or more of bedded sediment shows increasing deformation and offset of clastic deposits on the northwest margin of the basin. Coherent thin-bedded stratigraphic sections with strong reflectors to 30-100m depth are preserved on the western and northern margins of the basin. The southern and southeastern areas of the lake are generally seismically opaque, due to extensive ash and tephra deposits as well as widespread methane. Thin pockets of well-bedded, poorly consolidated sediment of probable Holocene and last glacial age are present within intrabasin depressions providing some local age constraints on surfaces adjacent to volcanic vents and volcanically modified features.

  5. Review of the recording and age of the Mono Lake Excursion

    Science.gov (United States)

    Coe, R.; Liddicoat, J.

    2009-04-01

    Among the brief departures from gradual, long-term behaviour of the palaeomagnetic field in the Brunhes Normal Chron that reached opposite polarity or have a Virtual Geomagnetic Pole deep in the southern hemisphere, the first to be reported is the Laschamp Excursion (LE) in volcanic rocks in the Massif Central in France (Bonhommet and Zahringer, 1969). They originally believed it occurred between about 9,000 to 20,000 years before present, but it is now assigned an age of about 40,000 years B.P. (Guillou et al., 2004). Denham and Cox (1971) unsuccessfully sought the LE in exposed lake sediments that seemed to span that interval in the Mono Basin in the western Great Basin of the U.S., but instead encountered anomalous field behaviour that is called the Mono Lake Excursion (MLE)(Liddicoat and Coe, 1979). As a tribute to Norbert Bonhommet, who assisted us in our initial field work in the Mono Basin and shared a long-standing interest in the LE and MLE, we will review the palaeomagnetic behaviour and age of the MLE in the Mono Basin and elsewhere, for which there are nearly 20 reports of its occurrence globally, and evaluate the recent suggestion that the excursion at Mono Lake and the LE are the same.

  6. Magnesium Mono Potassium Phosphate Grout For P-Reactor Vessel In-Situ Decomissioning

    International Nuclear Information System (INIS)

    The objective of this report is to document laboratory testing of magnesium mono potassium phosphate grouts for P-Reactor vessel in-situ decommissioning. Magnesium mono potassium phosphate cement-based grout was identified as candidate material for filling (physically stabilizing) the 105-P Reactor vessel (RV) because it is less alkaline than portland cement-based grout (pH of about 12.4). A less alkaline material (≤ 10.5) was desired to address a potential materials compatibility issue caused by corrosion of aluminum metal in highly alkaline environments such as that encountered in portland cement grouts. Information concerning access points into the P-Reactor vessel and amount of aluminum metal in the vessel is provided elsewhere. Fresh and cured properties were measured for: (1) commercially blended magnesium mono potassium phosphate packaged grouts, (2) commercially available binders blended with inert fillers at SRNL, (3) grouts prepared from technical grade MgO and KH2PO4 and inert fillers (quartz sands, Class F fly ash), and (4) Ceramicrete(regsign) magnesium mono potassium phosphate-based grouts prepared at Argonne National Laboratory. Boric acid was evaluated as a set retarder in the magnesium mono potassium phosphate mixes.

  7. Selective mono-radioiodination and characterization of a cell-penetrating peptide. L-Tyr-maurocalcine

    Energy Technology Data Exchange (ETDEWEB)

    Ahmadi, Mitra; Bacot, Sandrine; Perret, Pascale; Riou, Laurent; Ghezzi, Catherine [Universite Joseph Fourier, Grenoble (France); INSERM U1039, Grenoble (France). Radiopharmaceutiques Biocliniques; Poillot, Cathy; Cestele, Sandrine [INSERM U836, Grenoble (France). Grenoble Inst. of Neuroscience; Universite Joseph Fourier, Grenoble (France); Desruet, Marie-Dominique [INSERM U1039, Grenoble (France). Radiopharmaceutiques Biocliniques; Couvet, Morgane; Bourgoin, Sandrine; Seve, Michel [CRI-INSERM U823, Grenoble (France). Inst. of Albert Bonniot; Universite Joseph Fourier, Grenoble (France); Waard, Michel de [INSERM U836, Grenoble (France). Grenoble Inst. of Neuroscience; Universite Joseph Fourier, Grenoble (France); Smartox Biotechnologies, Grenoble (France)

    2014-07-01

    Mono-and poly-iodinated peptides form frequently during radioiodination procedures. However, the formation of a single species in its mono-iodinated form is essential for quantitative studies such as determination of tissue concentration or image quantification. Therefore, the aim of the present study was to define the optimal experimental conditions in order to exclusively obtain the mono-iodinated form of L-maurocalcine (L-MCa). L-MCa is an animal venom toxin which was shown to act as a cell-penetrating peptide. In order to apply the current direct radioiodination technique using oxidative agents including chloramine T, Iodo-Gen {sup registered} or lactoperoxidase, an analogue of this peptide containing a tyrosine residue (Tyr-L-MCa) was synthesized and was shown to fold/oxidize properly. The enzymatic approach using lactoperoxidase/H{sub 2}O{sub 2} was found to be the best method for radioiodination of Tyr-L-MCa. MALDI-TOF mass spectrometry analyses were then used for identification of the chromatographic eluting components of the reaction mixtures. We observed that the production of different radioiodinated species depended upon the reaction conditions. Our results successfully described the experimental conditions of peptide radioiodination allowing the exclusive production of the mono-iodinated form with high radiochemical purity and without the need for a purification step. Mono-radioiodination of L-Tyr-MCa will be crucial for future quantitative studies, investigating the mechanism of cell penetration and in vivo biodistribution.

  8. User perspectives on relevance criteria

    DEFF Research Database (Denmark)

    Maglaughlin, Kelly L.; Sonnenwald, Diane H.

    2002-01-01

    , partially relevant, or not relevant to their information need; and explained their decisions in an interview. Analysis revealed 29 criteria, discussed positively and negatively, that were used by the participants when selecting passages that contributed or detracted from a document's relevance. These...... criteria can be grouped into six categories: abstract (e.g., citability, informativeness), author (e.g., novelty, discipline, affiliation, perceived status), content (e.g., accuracy/validity, background, novelty, contrast, depth/scope, domain, citations, links, relevant to other interests, rarity, subject...... relevant, and not-relevant judgments, and that most criteria can have either a positive or negative contribution to the relevance of a document. The criteria most frequently mentioned by study participants were content, followed by criteria characterizing the full text document. These findings may have...

  9. Patterns of volcanism, weathering, and climate history from high-resolution geochemistry of the BINGO core, Mono Lake, California, USA

    Science.gov (United States)

    Zimmerman, S. R.; Starratt, S.; Hemming, S. R.

    2012-12-01

    Mono Lake, California is a closed-basin lake on the east side of the Sierra Nevada, and inflow from snowmelt dominates the modern hydrology. Changes in wetness during the last glacial period (>12,000 years ago) and over the last 2,000 years have been extensively described, but are poorly known for the intervening period. We have recovered a 6.25 m-long core from ~3 m of water in the western embayment of Mono Lake, which is shown by initial radiocarbon dates to cover at least the last 10,000 years. The sediments of the core are variable, ranging from black to gray silts near the base, laminated olive-green silt through the center, to layers of peach-colored carbonate nodules interbedded with gray and olive silts and pea-green organic ooze. Volcanic tephras from lake level and chemistry. Titanium (Ti) is chemically and biologically unreactive, and records the dominant input, from weathering of Sierra Nevada granite to the west and Miocene and Pliocene volcanic rocks of the Bodie and Adobe Hills to the north, east, and south. The rhyolitic tephras of the Mono-Inyo Craters are much lower in TiO2 than the bedrock (lake during periods of regression. The lowermost 1.5 m of the BINGO core contains the highest proportion of detrital input to Mono Lake over the last ~12,000 years, recorded by high Si, Ti, K, and Fe, in black to dark-gray, fine-grained silts above 10 cm of pure light gray silt. Based on radiocarbon dates of >10,000 calibrated years before present (cal yr BP) higher in the core, and significant disruption of the fine layers, this interval likely indicates a relatively deep lake persisting into the early Holocene, after the initial dramatic regression from late Pleistocene levels. The finely laminated olive-green silt of the period ~10,700 to ~7500 cal yr BP is very homogenous chemically, probably indicating a stable, stratified lake and a relatively wet climate. This section merits mm-scale scanning and petrographic examination in the future. The upper

  10. Geochemical fingerprinting of Wilson Creek formation tephra layers (Mono Basin, California) using titanomagnetite compositions

    Science.gov (United States)

    Marcaida, Mae; Mangan, Margaret T.; Vazquez, Jorge A.; Bursik, Marcus; Lidzbarski, Marsha I.

    2014-03-01

    Nineteen tephra layers within the Wilson Creek formation near Mono Lake provide a record of late Pleistocene to early Holocene volcanic activity from the nearby Mono Craters and are important chronostratigraphic markers for paleomagnetic, paleoclimatic, and paleoecologic studies. These stratigraphically important tephra deposits can be geochemically identified using compositions of their titanomagnetite phenocrysts. Titanomagnetite compositions display a broad range (XUsp 0.26-0.39), which allow the tephra layers to be distinguished despite the indistinguishable major-element glass compositions (76-77 wt% SiO2) of their hosts. The concentrations of Ti and Fe in titanomagnetite display geochemical and stratigraphic groupings that allow clear discrimination between older (> 57 ka) and younger (Mono Craters-sourced titanomagnetites also allows the discrimination of two tephra layers apparently sourced from nearby Mammoth Mountain volcano in Long Valley.

  11. Anaerobic Halo-Alkaliphilic Baterial Community of Athalassic, Hypersaline Mono Lake in California

    Science.gov (United States)

    Pikuta, Elena V.; Hoover, Richard B.; Marsic, Damien; Ng, Joseph D.; Six, N. Frank (Technical Monitor)

    2002-01-01

    The microorganisms of soda Mono Lake and other similar athalassic hypersaline alkaline soda lakes are of significance to Astrobiology. The microorganisms of these regimes represent the best known terrestrial analogs for microbial life that might have inhabited the hypersaline alkaline lakes and evaporites confined within closed volcanic basins and impact craters during the late Noachian and early Hesperian epochs (3.6 - 4.2 Gya) of ancient Mars. We have investigated the anaerobic microbiota of soda Mono Lake in northern California. In this paper we discuss the astrobiological significance of these ecosystems and describe several interesting features of two novel new species of anaerobic halo-alkaliphilic bacteria (Spirochaeta americana, sp. nov. and Desulfonatronum paiuteum, sp. nov) that we have isolated from Mono Lake.

  12. Horseradish peroxidase-catalyzed polymerization of L-DOPA for mono-/bi-enzyme immobilization and amperometric biosensing of H2O2 and uric acid.

    Science.gov (United States)

    Dai, Mengzhen; Huang, Ting; Chao, Long; Xie, Qingji; Tan, Yueming; Chen, Chao; Meng, Wenhua

    2016-03-01

    Horseradish peroxidase (HRP)-catalyzed polymerization of L-DOPA (vs. dopamine) in the presence of H2O2 (and uricase (UOx)) was exploited to immobilize mono-/bi-enzymes for hydroquinone-mediated amperometric biosensing of H2O2 and uric acid (UA). The relevant polymeric biocomposites (PBCs) were prepared in phosphate buffer solution containing HRP and L-DOPA (or plus UOx) after adding H2O2. The mono-/bi-enzyme amperometric biosensors were prepared simply by casting some of the PBCs on Au-plated Au (Au(plate)/Au) electrodes, followed by coating with an outer-layer chitosan (CS) film for each. UV-vis spectrophotometry, scanning electron microscopy, cyclic voltammetry and electrochemical impedance spectroscopy were used for film characterization and/or process monitoring. The HRP immobilized by enzyme catalysis well preserved its bioactivity, as confirmed by UV-vis spectrophotometry. Under optimized conditions, the monoenzyme CS/HRP-poly(L-DOPA) (PD)/Au(plate)/Au electrode potentiostated at -0.1V responded linearly to H2O2 concentration from 0.001 to 1.25mM with a sensitivity of 700μA mM(-1)cm(-2) and a limit of detection (LOD) of 0.1μM, and the bienzyme CS/UOx-HRP-PD/Au(plate)/Au electrode at -0.1V responded linearly to UA concentration from 0.001 to 0.4mM with a sensitivity of 349μA mM(-1)cm(-2) and a LOD of 0.1μM. The mono-/bi-enzyme biosensors based on biosynthesized PD performed better than many reported analogues and those based on similarly biosynthesized polydopamine. PMID:26717822

  13. Vibrations, Quanta and Biology

    CERN Document Server

    Huelga, S F

    2013-01-01

    Quantum biology is an emerging field of research that concerns itself with the experimental and theoretical exploration of non-trivial quantum phenomena in biological systems. In this tutorial overview we aim to bring out fundamental assumptions and questions in the field, identify basic design principles and develop a key underlying theme -- the dynamics of quantum dynamical networks in the presence of an environment and the fruitful interplay that the two may enter. At the hand of three biological phenomena whose understanding is held to require quantum mechanical processes, namely excitation and charge transfer in photosynthetic complexes, magneto-reception in birds and the olfactory sense, we demonstrate that this underlying theme encompasses them all, thus suggesting its wider relevance as an archetypical framework for quantum biology.

  14. Ontologies for molecular biology.

    Science.gov (United States)

    Schulze-Kremer, S

    1998-01-01

    Molecular biology has a communication problem. There are many databases using their own labels and categories for storing data objects and some using identical labels and categories but with a different meaning. A prominent example is the concept "gene" which is used with different semantics by major international genomic databases. Ontologies are one means to provide a semantic repository to systematically order relevant concepts in molecular biology and to bridge the different notions in various databases by explicitly specifying the meaning of and relation between the fundamental concepts in an application domain. Here, the upper level and a database branch of a prospective ontology for molecular biology (OMB) is presented and compared to other ontologies with respect to suitability for molecular biology (http:/(/)igd.rz-berlin.mpg.de/approximately www/oe/mbo.html). PMID:9697223

  15. Bacteriophage lambda: Early pioneer and still relevant.

    Science.gov (United States)

    Casjens, Sherwood R; Hendrix, Roger W

    2015-05-01

    Molecular genetic research on bacteriophage lambda carried out during its golden age from the mid-1950s to mid-1980s was critically important in the attainment of our current understanding of the sophisticated and complex mechanisms by which the expression of genes is controlled, of DNA virus assembly and of the molecular nature of lysogeny. The development of molecular cloning techniques, ironically instigated largely by phage lambda researchers, allowed many phage workers to switch their efforts to other biological systems. Nonetheless, since that time the ongoing study of lambda and its relatives has continued to give important new insights. In this review we give some relevant early history and describe recent developments in understanding the molecular biology of lambda's life cycle. PMID:25742714

  16. Communication: Linking the dielectric Debye process in mono-alcohols to density fluctuations.

    Science.gov (United States)

    Hecksher, Tina

    2016-04-28

    This work provides the first direct evidence that the puzzling dielectric Debye process observed in mono-alcohols is coupled to density fluctuations. The results open up for an explanation of the Debye process within the framework of conventional liquid-state theory. The spectral shape of the dynamical bulk modulus of the two studied mono-alcohols, 2-ethyl-1-hexanol and 4-methyl-3-heptanol, is nearly identical to that of their corresponding shear modulus, and thus the supramolecular structures believed to be responsible for the slow dielectric Debye process are manifested in the bulk modulus in the same way as in the shear modulus. PMID:27131521

  17. Mono- or bis-ligand complexes are better for chelation therapy? Theoretical approaches

    Science.gov (United States)

    Jakusch, Tamás; Kiss, Tamás

    2014-10-01

    In our theorethical approach we would like to point out that the dissociation constant (Kd value) of the complexes itself not enough parameter to describe the metal ion binding ability of the MPACS. The ligand concentration dependence of the free metal ion concentration is stronger is bis- or tris complexes are also formed (second or third order), than just mono complex (first order) exists, the theoretical therapeutic window should be more wide for tetra- penta- or hexadentate ligands (only mono complexes formed) than for bi- or tridentate chelators (bis- and tris complex formation is possible).

  18. A study of the growth of Pseudomonas putida CP1 on mono-chlorophenols

    OpenAIRE

    Fakhruddin, A. N. M.

    2003-01-01

    Pseudomonas putida CPI grew on all three mono-chlorophenol isomers when supplied as the sole source of carbon and energy. The biodegradability of the mono-chlorophenols followed the order: 4-chlorophenol > 2-chlorophenol > 3-chlorophenol. P. putida CPI was able to degrade 300 ppm 4-chlorophenol, 250 ppm 2-chlorophenol and 200 ppm of 3-chlorophenol. In the presence of fructose (1%, w/v) the organism could degrade 400 ppm 4-chlorophenol, 500 ppm 2-chlorophenol and 300 ppm 3-chlorophenol. Ch...

  19. HMM and IOHMM for the Recognition of Mono- and Bi-Manual 3D Hand Gestures

    OpenAIRE

    Just, Agnès; Bernier, O.; Marcel, Sébastien

    2004-01-01

    In this paper, we address the problem of the recognition of isolated complex mono- and bi-manual hand gestures. In the proposed system, hand gestures are represented by the 3D trajectories of blobs obtained by tracking colored body parts. In this paper, we study the results obtained on a complex database of mono- and bi-manual gestures. These results are obtained by using Input/Output Hidden Markov Model (IOHMM), implemented within the framework of an open source machine learning library, and...

  20. Recognition of Isolated Complex Mono- and Bi-Manual 3D Hand Gestures

    OpenAIRE

    Just, Agnès; Bernier, O.; Marcel, Sébastien

    2004-01-01

    In this paper, we address the problem of the recognition of isolated complex mono- and bi-manual hand gestures. In the proposed system, hand gestures are represented by the 3D trajectories of blobs. Blobs are obtained by tracking colored body parts in real-time using the EM algorithm. In most of the studies on hand gestures, only small vocabularies have been used. In this paper, we study the results obtained on a more complex database of mono- and bi-manual gestures. These results are obtaine...

  1. A study on synthesis and oxidation mechanism of mono-alkyl phosphate

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Oxidation of white phosphorus by peroxides to produce mono-alkyl phosphate in the alcoholic solution has been studied under non-and catalytic conditions. In this paper,the mechanism of the oxidation process was analyzed. The content of mono-alkyl phosphate in the product is affected by different types of alcoholic solution and peroxide solvent. The result shows the availability of the following order for the activity of the peroxide solvent and alcoholic solutions-tert-butyl hydroperoxide>(di) benzoyl perox...

  2. Systemic Cytokine and Interferon Responsiveness Patterns in HIV and HCV Mono and Co-Infections

    OpenAIRE

    Fernandez-Botran, Rafael; Joshi-Barve, Swati; Ghare, Smita; Barve, Shirish; Young, Mary; Plankey, Michael; Bordon, Jose

    2014-01-01

    The role of host response-related factors in the fast progression of liver disease in individuals co-infected with HIV and HCV viruses remains poorly understood. This study compared patterns of cytokines, caspase-1 activation, endotoxin exposure in plasma as well as interferon signaling in peripheral blood mononuclear cells from HIV/HCV co-infected (HIV+/HCV+), HCV mono-infected (HIV−/HCV+), HIV mono-infected (HIV+/HCV−) female patients and HIV- and HCV-uninfected women (HIV−/HCV−) who had en...

  3. Preparation of mono- and diacetyl 4,4′-dimethylbiphenyl and their corresponding carboxylic acids

    DEFF Research Database (Denmark)

    Titinchi, Salam J.J.; Kamounah, Fadhil S.; Abbo, Hanna S.

    2007-01-01

    Shape selective acetylation of 4,4′-dimethylbiphenyl using anhydrous aluminum chloride as catalyst is an effective route for the production of mono- and di-acetyl-4,4′-dimethylbiphenyl. Preparations, characterization and a catalytic study of the Friedel-Crafts acetylation of 4,4′-dimethylbiphenyl...... dimethylbiphenyls. In chloroalkane or carbon disulfide solvent, the yields of isomers were in the order: 2 -> 3-; in nitromethane 3-isomer predominated. On the other hand diacetylation of the hydrocarbon gave only the 2,3′-diacetyl isomer. The mono- and di-ketones are converted to the corresponding carboxylic acids...

  4. Self-assembled and electrochemically deposited mono/multilayers for molecular electronics applications

    International Nuclear Information System (INIS)

    For the development of molecular electronics, it is desirable to investigate characteristics of organic molecules with electronic device functionalities. In near future, such molecular devices could be integrated with silicon to prepare hybrid nanoelectronic devices. In this paper, we review work done in our laboratory on study of characteristics of some functional molecules. For these studies molecular mono and multilayers have been deposited on silicon surface by self-assembly and electrochemical deposition techniques. Both commercially available and specially designed and synthesized molecules have been utilized for these investigations. We demonstrate dielectric layers, memory, switching, rectifier and negative differential resistance devices based on molecular mono and multilayers.

  5. Communication: Linking the dielectric Debye process in mono-alcohols to density fluctuations

    Science.gov (United States)

    Hecksher, Tina

    2016-04-01

    This work provides the first direct evidence that the puzzling dielectric Debye process observed in mono-alcohols is coupled to density fluctuations. The results open up for an explanation of the Debye process within the framework of conventional liquid-state theory. The spectral shape of the dynamical bulk modulus of the two studied mono-alcohols, 2-ethyl-1-hexanol and 4-methyl-3-heptanol, is nearly identical to that of their corresponding shear modulus, and thus the supramolecular structures believed to be responsible for the slow dielectric Debye process are manifested in the bulk modulus in the same way as in the shear modulus.

  6. Comparative structure analysis of non-polar organic ferrofluids stabilized by saturated mono-carboxylic acids.

    Science.gov (United States)

    Avdeev, M V; Bica, D; Vékás, L; Aksenov, V L; Feoktystov, A V; Marinica, O; Rosta, L; Garamus, V M; Willumeit, R

    2009-06-01

    The structure of ferrofluids (magnetite in decahydronaphtalene) stabilized with saturated mono-carboxylic acids of different chain lengths (lauric, myristic, palmitic and stearic acids) is studied by means of magnetization analysis and small-angle neutron scattering. It is shown that in case of saturated acid surfactants, magnetite nanoparticles are dispersed in the carrier approximately with the same size distribution whose mean value and width are significantly less as compared to the classical stabilization with non-saturated oleic acid. The found thickness of the surfactant shell around magnetite is analyzed with respect to stabilizing properties of mono-carboxylic acids. PMID:19376524

  7. p-Type Quasi-Mono Silicon Solar Cell Fabricated by Ion Implantation

    OpenAIRE

    Chien-Ming Lee; Sheng-Po Chang; Shoou-Jinn Chang; Ching-In Wu

    2013-01-01

    The p-type quasi-mono wafer is a novel type of silicon material that is processed using a seed directional solidification technique. This material is a promising alternative to traditional high-cost Czochralski (CZ) and float-zone (FZ) material. Here, we evaluate the application of an advanced solar cell process featuring a novel method of ion implantation on p-type quasi-mono silicon wafer. The ion implantation process has simplified the normal industrial process flow by eliminating two proc...

  8. Relevance in the science classroom: A multidimensional analysis

    Science.gov (United States)

    Hartwell, Matthew F.

    While perceived relevance is considered a fundamental component of adaptive learning, the experience of relevance and its conceptual definition have not been well described. The mixed-methods research presented in this dissertation aimed to clarify the conceptual meaning of relevance by focusing on its phenomenological experience from the students' perspective. Following a critical literature review, I propose an identity-based model of perceived relevance that includes three components: a contextual target, an identity target, and a connection type, or lens. An empirical investigation of this model that consisted of two general phases was implemented in four 9th grade-biology classrooms. Participants in Phase 1 (N = 118) completed a series of four open-ended writing activities focused on eliciting perceived personal connections to academic content. Exploratory qualitative content analysis of a 25% random sample of the student responses was used to identify the main meaning-units of the proposed model as well as different dimensions of student relevance perceptions. These meaning-units and dimensions provided the basis for the construction of a conceptual mapping sentence capturing students' perceived relevance, which was then applied in a confirmatory analysis to all other student responses. Participants in Phase 2 (N = 139) completed a closed survey designed based on the mapping sentence to assess their perceived relevance of a biology unit. The survey also included scales assessing other domain-level motivational processes. Exploratory factor analysis and non-metric multidimensional scaling indicated a coherent conceptual structure, which included a primary interpretive relevance dimension. Comparison of the conceptual structure across various groups (randomly-split sample, gender, academic level, domain-general motivational profiles) provided support for its ubiquity and insight into variation in the experience of perceived relevance among students of different

  9. Understanding the Constitutive and Induced Biosynthesis of Mono- and Sesquiterpenes in Grapes (Vitis vinifera): A Key to Unlocking the Biochemical Secrets of Unique Grape Aroma Profiles.

    Science.gov (United States)

    Schwab, Wilfried; Wüst, Matthias

    2015-12-16

    The present review integrates current knowledge on mono- and sesquiterpenes in grapes with a special focus on biochemical and physiological aspects. Recent research has impressively shown the prominence of terpenoid metabolism in grapevine (Vitis sp). The 69 putatively functional mono- and sesquiterpene synthases that were identified by the analysis of the updated 12-fold sequencing and assembly of the grapevine genome deliver the scaffolds for structural diversity and display a surprising expansion of the terpene synthase (TPS) gene family in grapevine when compared to other plants like Arabidopsis thaliana (32 TPS). While monoterpenes occur as highly functionalized compounds and are stored as their corresponding glycoconjugates in berry tissues, sesquiterpenes are mainly present as unsaturated hydrocarbons and accumulate in the epicuticular wax layer of intact berries. Interestingly, both groups of terpenes appear to be involved as volatile organic compounds in plant defense and their biosynthesis is enhanced via the jasmonic acid signaling pathway. These novel aspects will help to understand how environmental cues affect the genes and enzymes of various metabolic pathways of relevant wine aroma compounds with numerous links to enology and wine flavor chemistry. PMID:26592256

  10. Biological and Chemical Security

    Energy Technology Data Exchange (ETDEWEB)

    Fitch, P J

    2002-12-19

    The LLNL Chemical & Biological National Security Program (CBNP) provides science, technology and integrated systems for chemical and biological security. Our approach is to develop and field advanced strategies that dramatically improve the nation's capabilities to prevent, prepare for, detect, and respond to terrorist use of chemical or biological weapons. Recent events show the importance of civilian defense against terrorism. The 1995 nerve gas attack in Tokyo's subway served to catalyze and focus the early LLNL program on civilian counter terrorism. In the same year, LLNL began CBNP using Laboratory-Directed R&D investments and a focus on biodetection. The Nunn-Lugar-Domenici Defense Against Weapons of Mass Destruction Act, passed in 1996, initiated a number of U.S. nonproliferation and counter-terrorism programs including the DOE (now NNSA) Chemical and Biological Nonproliferation Program (also known as CBNP). In 2002, the Department of Homeland Security was formed. The NNSA CBNP and many of the LLNL CBNP activities are being transferred as the new Department becomes operational. LLNL has a long history in national security including nonproliferation of weapons of mass destruction. In biology, LLNL had a key role in starting and implementing the Human Genome Project and, more recently, the Microbial Genome Program. LLNL has over 1,000 scientists and engineers with relevant expertise in biology, chemistry, decontamination, instrumentation, microtechnologies, atmospheric modeling, and field experimentation. Over 150 LLNL scientists and engineers work full time on chemical and biological national security projects.

  11. Stepwise Reduction of Immobilized Mono layer Graphene Oxides

    DEFF Research Database (Denmark)

    Petersen, Søren; He, Yudong; Lang, Jiang;

    2013-01-01

    -ray photoelectron spectroscopy (XPS) along with electrical characterization. XPS measurements confirmed a full conversion into virtually oxygen-free chemically converted graphene. The electrical characterization revealed large variations in the conductivity for single sheets in the diluted LB films, with an average......Chemically converted graphene is highly relevant for transparent conducting film applications such as display and photovoltaic uses. So far, the major obstacle for realizing the potential has been to fully reduce/deoxygenate the graphene oxide (GO), which is challenging in part due to the...... pronounced aggregation that accompanies deoxygenation of GO in solution. Surface immobilization of monolayered graphene oxide (mGO) in Langmuir-Blodgett (LB) films was investigated as a method to circumvent this problem. Two types of LB films with different density of mGO flakes were prepared, i.e., diluted...

  12. 40 CFR 721.3130 - Sulfuric acid, mono-C9-11-alkyl esters, sodium salts.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 30 2010-07-01 2010-07-01 false Sulfuric acid, mono-C9-11-alkyl esters... Specific Chemical Substances § 721.3130 Sulfuric acid, mono-C9-11-alkyl esters, sodium salts. (a) Chemical substance and significant new uses subject to reporting. (1) The chemical substance identified as...

  13. 76 FR 36349 - Diethylene Glycol MonoEthyl Ether (DEGEE); Exemption From the Requirement of a Tolerance

    Science.gov (United States)

    2011-06-22

    ... AGENCY 40 CFR Part 180 Diethylene Glycol MonoEthyl Ether (DEGEE); Exemption From the Requirement of a... establishes an exemption from the requirement of a tolerance for residues of Diethylene Glycol MonoEthyl Ether...) 305-5805. II. Petition for Exemption In the Federal Register of July 9, 2008 (73 FR 39291)...

  14. Three-Dimensional Analysis of dike/fault interaction at Mono Basin (California) using the Finite Element Method

    Science.gov (United States)

    La Marra, D.; Battaglia, M.

    2013-12-01

    Mono Basin is a north-trending graben that extends from the northern edge of Long Valley caldera towards the Bodie Hills and is bounded by the Cowtrack Mountains on the east and the Sierra Nevada on the west. The Mono-Inyo Craters volcanic chain forms a north-trending zone of volcanic vents extending from the west moat of the Long Valley caldera to Mono Lake. The Hartley Springs fault transects the southern Mono Craters-Inyo Domes area between the western part of the Long Valley caldera and June Lake. Stratigraphic data suggest that a series of strong earthquakes occurred during the North Mono-Inyo eruption sequence of ~1350 A.D. The spatial and temporal proximity between Hartley Springs Fault motion and the North Mono-Inyo eruption sequence suggests a possible relation between seismic events and eruptions. We investigate the interactions between slip along the Hartley Springs fault and dike intrusion beneath the Mono-Inyo craters using a three-dimensional finite element model of the Mono Basin. We employ a realistic representation of the Basin that includes topography, vertical and lateral heterogeneities of the crust, contact relations between fault planes, and a physical model of the pressure required to propagate the dike. We estimate (a) the distribution of Coulomb stress changes to study the influence of dike intrusion on Hartley Springs fault, and (b) the local stress and volumetric dilatation changes to understand how fault slip may influence the propagation of a dike towards the surface.

  15. The effect of trace element addition to mono-digestion of grass silage at high organic loading rates.

    Science.gov (United States)

    Wall, David M; Allen, Eoin; Straccialini, Barbara; O'Kiely, Padraig; Murphy, Jerry D

    2014-11-01

    This study investigated the effect of trace element addition to mono-digestion of grass silage at high organic loading rates. Two continuous reactors were compared. The first mono-digested grass silage whilst the second operated in co-digestion, 80% grass silage with 20% dairy slurry (VS basis). The reactors were run for 65weeks with a further 5weeks taken for trace element supplementation for the mono-digestion of grass silage. The co-digestion reactor reported a higher biomethane efficiency (1.01) than mono-digestion (0.90) at an OLR of 4.0kgVSm(-3)d(-1) prior to addition of trace elements. Addition of cobalt, iron and nickel, led to an increase in the SMY in mono-digestion of grass silage by 12% to 404LCH4kg(-1)VS and attained a biomethane efficiency of 1.01. PMID:25280042

  16. Synthesis of lanthanum tris (mono-i-octyl phthalate)and its thermal stability for polyvinyl chloride

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A novel type of thermal stabilizer-lanthanum tris (mono-i-octyl phthalate) (LTMP) was synthesized by double-decomposition reaction of sodium mono-i-octyl phthalate with lanthanum chloride at 60℃.Sodium mono-i-octyl phthalate was prepared by sodium hydrate and mono-i-octyl phthalate prepared by reaction of isooctyl alcohol and phthalic anhydride in the presence of sulfuric acid catalyst at 110 ℃. The yield of lanthanum tris (mono-i-octyl phthalate) is about 84.5%. Its thermal stabilities were measured by heat-ageing oven test when incorporated into PVC. The experimental results show that the heat stability time is about 40min at 190 ℃ when adding 3phr (per hundred resin) to PVC. The thermal stability of this product is better than that of Ca-Zn complex and basic lead salt stabilizers, and equal to that of dibutyltin dilaurate.

  17. Chromatographic separation and characterization of mono-, di- and triaromatic hydrocarbons in gas oil

    Energy Technology Data Exchange (ETDEWEB)

    Rashid, H.A.; Fakhri, N.A.; Dekran, S.B.; Abdulla, N.I.

    1989-04-01

    A simple procedure is described for separation of aromatic hydrocarbons into mono-, di- and trinuclear types in Iraqi gas oil. This is accomplished by elution through an alumina adsorption column under standardized conditions. Characterization is performed by UV-absorption and ratio matching method. The method can be used also for investigating aromatic hydrocarbon structures of other petroleum fractions.

  18. A study on synthesis and oxidation mechanism of mono-alkyl phosphate

    Institute of Scientific and Technical Information of China (English)

    Sheng Wang; Shu-yun Yan; Qing-guo Ye

    2009-01-01

    Oxidation of white phosphor, us by peroxides to produce mono-alkyl phosphate in the alcoholic solution has been studied under non-and catalytic conditions. In this paper, the mechanism of the oxidation process was analyzed. The content of mono-alkyl phosphalte in the product is affected by different types of alcoholic solution and peroxide solvent. The result shows the availabulity of the following order for the activity of the peroxide solvent and alcoholic solutions-tert-butyl hydroperoxide>(di) benzoyl peroxide>hydroperoxide; methanol> n-butyl alcohol> phenol. Under optimized reaction conditions: n (a white phosphorus) : n( tert-butyl hydroperoxide) : n (methanol)= 1:10:12, reaction temperature 80 ℃, reaction time 2.5 h, products of 80.0% mono-alkyl phosphonates can be provided when white phosphorus undergoes oxidation by tert-butyl hydroperoxide in the methanol solutions. When Cu (I), and Cn(Ⅱ) complexes are used as catalysts, it is possible to significantly enhance the oxidation of white phosphorus with the increase in the reaction rate. Th'e order for activity of catalysts is Cu(acac)2>Cu (CH3COO)2>Cu (C3 H7COO)2:>CuI>CuCI2. Noticeably, with Cu(acac)2 as catalyst, the selectivity for mono-alkyl phusphonates can reach 95% under adequate reaction conditions.

  19. One-step selection of Vaccinia virus-binding DNA aptamers by MonoLEX

    Directory of Open Access Journals (Sweden)

    Stöcklein Walter

    2007-08-01

    Full Text Available Abstract Background As a new class of therapeutic and diagnostic reagents, more than fifteen years ago RNA and DNA aptamers were identified as binding molecules to numerous small compounds, proteins and rarely even to complete pathogen particles. Most aptamers were isolated from complex libraries of synthetic nucleic acids by a process termed SELEX based on several selection and amplification steps. Here we report the application of a new one-step selection method (MonoLEX to acquire high-affinity DNA aptamers binding Vaccinia virus used as a model organism for complex target structures. Results The selection against complete Vaccinia virus particles resulted in a 64-base DNA aptamer specifically binding to orthopoxviruses as validated by dot blot analysis, Surface Plasmon Resonance, Fluorescence Correlation Spectroscopy and real-time PCR, following an aptamer blotting assay. The same oligonucleotide showed the ability to inhibit in vitro infection of Vaccinia virus and other orthopoxviruses in a concentration-dependent manner. Conclusion The MonoLEX method is a straightforward procedure as demonstrated here for the identification of a high-affinity DNA aptamer binding Vaccinia virus. MonoLEX comprises a single affinity chromatography step, followed by subsequent physical segmentation of the affinity resin and a single final PCR amplification step of bound aptamers. Therefore, this procedure improves the selection of high affinity aptamers by reducing the competition between aptamers of different affinities during the PCR step, indicating an advantage for the single-round MonoLEX method.

  20. The acute effects of mono(2-ethylhexyl)phthalate (MEHP) on testes of prepubertal Wistar rats

    DEFF Research Database (Denmark)

    Dalgaard, M.; Nellemann, Christine Lydia; Lam, Henrik Rye; Sørensen, Ilona Kryspin; Ladefoged, Ole

    2001-01-01

    A single oral dose of 400 mg/kg body weight of mono(2-ethylhexyl)phthalate (MEHP), the testis toxic metabolite of di(2-ethylhexyl)phthalate. was given to 28-day-old male Wistar rats and the testis toxic effects were investigated 3, 6. and 12 h after exposure. Detachment and sloughing of germ cells...

  1. Synthesis and photochromic behavior of mono-,and biphotochromic system linked by p-phenylene bridge

    Institute of Scientific and Technical Information of China (English)

    N.O.Mahmoodi; K.Tabatabaeian; A.Ghavidast

    2010-01-01

    The synthesis of mono- and bis-1,3-diazabicyclo[3.1.0]hex-3-ene derivatives with indole ring and p-phenylene spacer,which behave as photochromic materials,is reported.The structure-photochromic behavior relationship (SPBR) of the synthesized compounds has been analyzed.

  2. Endotoxin testing of proteins for parenteral administration using the Mono Mac 6 assay

    DEFF Research Database (Denmark)

    Moesby, Lise; Hansen, E W; Christensen, J D

    2000-01-01

    Pharmaceutical products containing proteins cause problems in testing for endotoxin and pyrogens. Many proteins interfere with the LAL test and the proteins are immunogenic in rabbits. The monocytic cell line Mono Mac 6 is an alternative assay for detection of endotoxin and other pyrogens....

  3. DEVELOPMENTAL NEUOTOXICITY EVALUATION OF MIXTURES OF MONO- AND DIMETHYL TIN IN DRINKING WATER OF RATS.

    Science.gov (United States)

    Developmental Neurotoxicity Evaluation of Mixtures of Mono- and Dimethyl Tin in Drinking Water of RatsV.C. Moser, K.L. McDaniel, P.M. PhillipsNeurotoxicology Division, NHEERL, ORD, US EPA, RTP, NC, USAOrganotins, especially monomethyl (MMT) and dimethyl (D...

  4. Synthesis of hierarchical zeolites using an inexpensive mono-quaternary ammonium surfactant as mesoporogen.

    Science.gov (United States)

    Zhu, Xiaochun; Rohling, Roderigh; Filonenko, Georgy; Mezari, Brahim; Hofmann, Jan P; Asahina, Shunsuke; Hensen, Emiel J M

    2014-12-01

    A simple amphiphilic surfactant containing a mono-quaternary ammonium head group (N-methylpiperidine) is effective in imparting substantial mesoporosity during synthesis of SSZ-13 and ZSM-5 zeolites. Highly mesoporous SSZ-13 prepared in this manner shows greatly improved catalytic performance in the methanol-to-olefins reaction compared to bulk SSZ-13. PMID:25316609

  5. Maillard reaction products of rice protein hydrolysates with mono-, oligo- and polysaccharides

    Science.gov (United States)

    Rice protein, a byproduct of rice syrup production, is abundant but, its lack of functionality prevents its wide use as a food ingredient. Maillard reaction products of (MRPs) hydrolysates from the limited hydrolysis of rice protein (LHRP) and various mono-, oligo- and polysaccharides were evaluat...

  6. Emotions in freely varying and mono-pitched vowels, acoustic and EGG analyses.

    Science.gov (United States)

    Waaramaa, Teija; Palo, Pertti; Kankare, Elina

    2015-12-01

    Vocal emotions are expressed either by speech or singing. The difference is that in singing the pitch is predetermined while in speech it may vary freely. It was of interest to study whether there were voice quality differences between freely varying and mono-pitched vowels expressed by professional actors. Given their profession, actors have to be able to express emotions both by speech and singing. Electroglottogram and acoustic analyses of emotional utterances embedded in expressions of freely varying vowels [a:], [i:], [u:] (96 samples) and mono-pitched protracted vowels (96 samples) were studied. Contact quotient (CQEGG) was calculated using 35%, 55%, and 80% threshold levels. Three different threshold levels were used in order to evaluate their effects on emotions. Genders were studied separately. The results suggested significant gender differences for CQEGG 80% threshold level. SPL, CQEGG, and F4 were used to convey emotions, but to a lesser degree, when F0 was predetermined. Moreover, females showed fewer significant variations than males. Both genders used more hypofunctional phonation type in mono-pitched utterances than in the expressions with freely varying pitch. The present material warrants further study of the interplay between CQEGG threshold levels and formant frequencies, and listening tests to investigate the perceptual value of the mono-pitched vowels in the communication of emotions. PMID:24998780

  7. Mono- and bis(pyrrolo)tetrathiafulvalene derivatives tethered to C60

    DEFF Research Database (Denmark)

    Vico Solano, Marta; Della Pia, Eduardo Antonio; Jevric, Martyn; Schubert, Christina; Wang, Xintai; van der Pol, Cornelia; Kadziola, Anders; Nørgaard, Kasper; Guldi, Dirk M.; Nielsen, Mogens Brøndsted; Jeppesen, Jan Oskar

    2014-01-01

    A series of mono- (MPTTF) and bis(pyrrolo) tetrathiafulvalene (BPTTF) derivatives tethered to one or two C-60 moieties was synthesized and characterized. The synthetic strategy for these dumbbell-shaped compounds was based on a 1,3-dipolar cycloaddition reaction between aldehyde-functionalized MP...

  8. The Effects of Operational Parameters on a Mono-wire Cutting System: Efficiency in Marble Processing

    Science.gov (United States)

    Yilmazkaya, Emre; Ozcelik, Yilmaz

    2016-02-01

    Mono-wire block cutting machines that cut with a diamond wire can be used for squaring natural stone blocks and the slab-cutting process. The efficient use of these machines reduces operating costs by ensuring less diamond wire wear and longer wire life at high speeds. The high investment costs of these machines will lead to their efficient use and reduce production costs by increasing plant efficiency. Therefore, there is a need to investigate the cutting performance parameters of mono-wire cutting machines in terms of rock properties and operating parameters. This study aims to investigate the effects of the wire rotational speed (peripheral speed) and wire descending speed (cutting speed), which are the operating parameters of a mono-wire cutting machine, on unit wear and unit energy, which are the performance parameters in mono-wire cutting. By using the obtained results, cuttability charts for each natural stone were created on the basis of unit wear and unit energy values, cutting optimizations were performed, and the relationships between some physical and mechanical properties of rocks and the optimum cutting parameters obtained as a result of the optimization were investigated.

  9. Production of pulse in mono-cropped rice system in the coastal region of Eastern India

    International Nuclear Information System (INIS)

    This experiment was undertaken with an objective to increase the yield of black-gram leguminous pulse crop through optimal doses of phosphatic fertilizer with supplemental irrigation in mono-cropped rice-fallow regions of India. Irrigation and phosphorus fertilizer application were introduced for enhancing productivity of black-gram to provide better returns to available water resources

  10. Assessment of SRTM for studies of deformed lake terraces, Mono Basin, CA, USA

    Science.gov (United States)

    Breier, P.; Bursik, M.; Webb, F.

    2003-04-01

    Mono Lake lies east of the Sierra Nevada, central California, USA. Late Quaternary transgressions and regressions of Mono Lake have produced well-defined terraces within the active and relict shorelands of Mono Basin, as well as on the islands within the lake, including the largest, Paoha Island. To assess the ability of SRTM data to resolve the terraces, we compared the SRTM data to TOPSAR data along topographic profiles. The accuracy of the profiles was assessed by visual and statistical comparison. Information was then extracted from the profiles to determine whether the terraces showed any evidence of warping or offset. Perhaps the most prominent terraces within the basin lie on the eastern and western sides of Paoha Island. When compared with the TOPSAR profiles across these terraces, SRTM profiles are systematically smoother and higher. Comparison of a running average of the TOPSAR data as well as TOPSAR data decimated to 30 m with the SRTM data suggests that much of the SRTM smoothness is the result of the 30 m spacing of the SRTM data as opposed to the 5 m spacing of the TOPSAR data. There is however a mean vertical difference observed between the SRTM and TOPSAR datasets that averages approximately 5 m over a large part of the basin. Near the tops of hills and ridges, the difference between the datasets is less than it is over depressions or areas of low relief. We are investigating the potential causes of the systematic difference. We are exploring the SRTM and TOPSAR data to understand their suitability for determination of deformation of shoreline features. In particular, we are interested in whether magmatic activity beneath the Mono Craters, a volcanic chain on the southern margin of Mono Lake, may be responsible for deformation of a latest Pleistocene(?) terrace at a nominal elevation of 1990 m. The elevation of the bluff-berm break in slope for this terrace was estimated to be at the point of maximum curvature in topographic profiles crossing the

  11. Finite Element Analysis Of Structural And Magmatic Interactions At Mono Basin (California)

    Science.gov (United States)

    La Marra, D.; Manconi, A.; Battaglia, M.

    2010-12-01

    Mono Basin is a northward trending graben situated east of the Sierra Nevada and west of Cowtrack Mountains, extending from the northern edge of Long Valley Caldera towards the Bodie Hills. From a hydrographic perspective, the Mono Basin is defined by all streams that drain into Mono Lake. The Mono-Inyo Craters forms a prominent 25-km-long volcanic complex from the NW corner of Long Valley caldera to the southern edge of Mono Lake. The late Quaternary Hartley Springs fault occurs along the Sierran range front between June Lake and the northern border of Long Valley Caldera. Recently it has been proposed that the manifestation of the volcanic and of the tectonic activity in this area is likely interrelated. According to Bursik et al (2003), stratigraphic data suggest that during the North Mono-Inyo eruption sequence of ~1350 A.D., a series of strong earthquakes occurred across the end of the North Mono explosive phase and the beginning of the Inyo explosive phase. Moreover, geological and geomorphic features of the Hartley Springs fault are consistent with rupture of the fault during the eruption sequence. We use the Finite Element Method (FEM) to simulate a three-dimensional model and investigate the feedback mechanism between dike intrusion and slip along the Hartley Springs fault. We first validate our numerical model against the Okada (1985) analytical solution for a homogeneous and elastic flat half-space. Subsequently, we evaluate the distribution of local stress changes to study the influence of the Inyo Dike intrusion in ~1350 A.D. on Hartley Springs fault, and how the fault slip may encourage the propagation of dikes towards the surface. To this end, we considered the standard Coulomb stress change as failure criterion. Finally, we analyze the effects of the topography and of vertical and lateral heterogeneities of the crust on the distribution of local and regional stress changes. In this presentation, we highlight the preliminary results of our analysis

  12. High-resolution aeromagnetic survey of the Mono Basin-Long Valley Caldera region, California

    Science.gov (United States)

    Ponce, D. A.; Mangan, M.; McPhee, D.

    2013-12-01

    A new high-resolution aeromagnetic survey of the Mono Basin-Long Valley Caldera region greatly enhances previous magnetic interpretations that were based on older, low-resolution, and regional aeromagnetic data sets and provides new insights into volcano-tectonic processes. The surveyed area covers a 8,750 km2 NNW-trending swath situated between the Sierra Nevada to the west and the Basin and Range Province to the east. The surveyed area includes the volcanic centers of Mono Lake, Mono-Inyo Craters, Mammoth Mountain, Devils Postpile, and Long Valley Caldera. The NW-trending eastern Sierra frontal fault zone crosses through the study area, including the active Mono Lake, Silver Lake, Hartley Springs, Laurel Creek, and Hilton Creek faults. Over 6,000 line-kilometers of aeromagnetic data were collected at a constant terrain clearance of 150 m, a flight-line spacing of 400 m, and a tie-line spacing of 4 km. Data were collected via helicopter with an attached stinger housing a magnetic sensor using a Scintrex CS-3 cesium magnetometer. In the northern part of the survey area, data improve the magnetic resolution of the individual domes and coulees along Mono Craters and a circular shaped magnetic anomaly that coincides with a poorly defined ring fracture mapped by Kistler (1966). Here, aeromagnetic data combined with other geophysical data suggests that Mono Craters may have preferentially followed a pre-existing plutonic basement feature that may have controlled the sickle shape of the volcanic chain. In the northeastern part of the survey, aeromagnetic data reveal a linear magnetic anomaly that correlates with and extends a mapped fault. In the southern part of the survey, in the Sierra Nevada block just south of Long Valley Caldera, aeromagnetic anomalies correlate with NNW-trending Sierran frontal faults rather than to linear NNE-trends observed in recent seismicity over the last 30 years. These data provide an important framework for the further analysis of the

  13. Surfactant-assisted synthesis of mono-dispersed cubic BaTiO3 nanoparticles

    International Nuclear Information System (INIS)

    Mono-dispersed BaTiO3 nanoparticles have been prepared via the assistance of capping agent poly(vinylpyrrolidone) (PVP). - Highlights: • BaTiO3 nanoparticles with single cubic crystal structure. • Poor dispersibility of nanoparticles has been overcome by in situ modification way. • Growth competition between BaTiO3 core and polymer shell. - Abstract: In this study, poly(vinylpyrrolidone)-assisted synthesis of mono-dispersed BaTiO3 nanoparticles have been reported. The various processing parameters, namely, refluxing temperature, KOH concentration, and poly(vinylpyrrolidone) concentration, have been varied, and the effects on the growth of BaTiO3 particles have been analyzed systematically. X-ray diffraction studies indicated that poly(vinylpyrrolidone) did not affect the crystal structure, but rather influenced the crystal lattice structure. In addition, the use of surfactant poly(vinylpyrrolidone) hindered the agglomeration of the nanoparticles, and facilitated the formation of mono-dispersed core–shell organic/inorganic hybrid nanocomposite. Furthermore, the mineralizer KOH promoted the dissolution of reactants and promoted the crystallization of BaTiO3 particles. Accordingly, the dissolution-precipitation scheme was believed to be the mechanism underlying the formation of BaTiO3 particles. This was further substantiated by the experimental observations, which indicated that the nucleation and crystallization of the particles was affected by the KOH concentration in the reaction system. Finally, the formation of mono-dispersed core–shell nanocomposites proceeded via reaction limited cluster aggregation. We believe that the method proposed in this study could be extended for the synthesis of mono-dispersed nanoparticles for industrial applications

  14. A new approach to modelling and designing mono-block dental implants

    Directory of Open Access Journals (Sweden)

    R. Hunter

    2007-05-01

    Full Text Available Purpose: of this paper is present a new approach to modelling and design the low cost mono-block dental implants based on the integration of the computer aided techniques. This approach provides the automation of the design process of the mono-block dental implants.Design/methodology/approach: The approach used to develop the modelling and design of the mono-block dental implants are based on the parametrization of the main geometric features of the implants. This approach allows to generate several designs of the implant with different configurations respect to the dimensions, forms and tolerances.Findings: The findings are focused on two main topics. The first one is the minimization of the manufacturing cost and time based on the manufacture process automation. The second one is the integration, in the same informatics platform, of the design, analysis and manufacturing environment.Research limitations/implications: The implications are focused on the development of a new design of mono-block dental implants. One of the main features of this design is associated to the reduction of the surgical stage and their simplification respect to other commercial implants.Practical implications: The main outcomes and implications of this research is the design of a low cost dental implant. This solution is implemented to assist the social programs of oral health.Originality/value: The originality of this research is the design of a new model of mono-block dental implant. The structure of this implant improves the mechanical properties; reduce the manufacturing cost and the surgical complications.

  15. X-ray and vibrational spectroscopy of manganese complexes relevant to the oxygen-evolving complex of photosynthesis

    International Nuclear Information System (INIS)

    Manganese model complexes, relevant to the oxygen-evolving complex (OEC) in photosynthesis, were studied with Mn K-edge X-ray absorption near-edge spectroscopy (XANES), Mn Kb X-ray emission spectroscopy (XES), and vibrational spectroscopy. A more detailed understanding was obtained of the influence of nuclearity, overall structure, oxidation state, and ligand environment of the Mn atoms on the spectra from these methods. This refined understanding is necessary for improving the interpretation of spectra of the OEC. Mn XANES and Kb XES were used to study a di-(mu)-oxo and a mono-(mu)-oxo di-nuclear Mn compound in the (III,III), (III,IV), and (IV,IV) oxidation states. XANES spectra show energy shifts of 0.8 - 2.2 eV for 1-electron oxidation-state changes and 0.4 - 1.8 eV for ligand-environment changes. The shifts observed for Mn XES spectra were approximately 0.21 eV for oxidation state-changes and only approximately 0.04 eV for ligand-environment changes. This indicates that Mn Kb XES i s more sensitive to the oxidation state and less sensitive to the ligand environment of the Mn atoms than XANES. These complimentary methods provide information about the oxidation state and the ligand environment of Mn atoms in model compounds and biological systems. A versatile spectroelectrochemical apparatus was designed to aid the interpretation of IR spectra of Mn compounds in different oxidation states. The design, based on an attenuated total reflection device, permits the study of a wide spectral range: 16,700 (600 nm) - 225

  16. X-ray and vibrational spectroscopy of manganese complexes relevant to the oxygen-evolving complex of photosynthesis

    Energy Technology Data Exchange (ETDEWEB)

    Visser, Hendrik

    2001-05-16

    Manganese model complexes, relevant to the oxygen-evolving complex (OEC) in photosynthesis, were studied with Mn K-edge X-ray absorption near-edge spectroscopy (XANES), Mn Kb X-ray emission spectroscopy (XES), and vibrational spectroscopy. A more detailed understanding was obtained of the influence of nuclearity, overall structure, oxidation state, and ligand environment of the Mn atoms on the spectra from these methods. This refined understanding is necessary for improving the interpretation of spectra of the OEC. Mn XANES and Kb XES were used to study a di-(mu)-oxo and a mono-(mu)-oxo di-nuclear Mn compound in the (III,III), (III,IV), and (IV,IV) oxidation states. XANES spectra show energy shifts of 0.8 - 2.2 eV for 1-electron oxidation-state changes and 0.4 - 1.8 eV for ligand-environment changes. The shifts observed for Mn XES spectra were approximately 0.21 eV for oxidation state-changes and only approximately 0.04 eV for ligand-environment changes. This indicates that Mn Kb XES i s more sensitive to the oxidation state and less sensitive to the ligand environment of the Mn atoms than XANES. These complimentary methods provide information about the oxidation state and the ligand environment of Mn atoms in model compounds and biological systems. A versatile spectroelectrochemical apparatus was designed to aid the interpretation of IR spectra of Mn compounds in different oxidation states. The design, based on an attenuated total reflection device, permits the study of a wide spectral range: 16,700 (600 nm) - 225

  17. Humanos salvajes y monos altruistas. Reflexiones sobre Darwin

    Directory of Open Access Journals (Sweden)

    Martinez Contreras Jorge

    2009-12-01

    .0pt; mso-footer-margin:36.0pt; mso-paper-source:0;} div.Section1 {page:Section1;} -->

    RESUMEN

     

    Darwin propuso en 1871 que preferiría descender de un mono que de los “salvajes”. El mono es un babuino hamadryas que, en un relato de Brehm, salva a un infante de una jauría. Los “salvajes” son los fueguinos a los que visitó en los años 1830. ¿Por qué Darwin fue tan buen observador del comportamiento animal y por qué no dudo discernir en qué consistía la sociedad de cazadores-recolectores de los cuatro grupos de Tierra del Fuego?. Esto es lo que tratamos de dilucidar en este trabajo.

     

  18. Relevance theory: pragmatics and cognition.

    Science.gov (United States)

    Wearing, Catherine J

    2015-01-01

    Relevance Theory is a cognitively oriented theory of pragmatics, i.e., a theory of language use. It builds on the seminal work of H.P. Grice(1) to develop a pragmatic theory which is at once philosophically sensitive and empirically plausible (in both psychological and evolutionary terms). This entry reviews the central commitments and chief contributions of Relevance Theory, including its Gricean commitment to the centrality of intention-reading and inference in communication; the cognitively grounded notion of relevance which provides the mechanism for explaining pragmatic interpretation as an intention-driven, inferential process; and several key applications of the theory (lexical pragmatics, metaphor and irony, procedural meaning). Relevance Theory is an important contribution to our understanding of the pragmatics of communication. PMID:26263065

  19. Clinical relevance in anesthesia journals

    DEFF Research Database (Denmark)

    Lauritsen, Jakob; Møller, Ann M

    2006-01-01

    The purpose of this review is to present the latest knowledge and research on the definition and distribution of clinically relevant articles in anesthesia journals. It will also discuss the importance of the chosen methodology and outcome of articles.......The purpose of this review is to present the latest knowledge and research on the definition and distribution of clinically relevant articles in anesthesia journals. It will also discuss the importance of the chosen methodology and outcome of articles....

  20. Relevance for SAT(ID)

    OpenAIRE

    Jansen, Joachim; Bogaerts, Bart; Devriendt, Jo; Janssens, Gerda; Denecker, Marc

    2016-01-01

    Inductive definitions and justifications are well-studied concepts. Solvers that support inductive definitions have been developed, but several of their computationally nice properties have never been exploited to improve these solvers. In this paper, we present a new notion called relevance. We determine a class of literals that are relevant for a given definition and partial interpretation, and show that choices on irrelevant atoms can never benefit the search for a model. We pr...

  1. Geographic relevance in mobile services

    OpenAIRE

    Reichenbacher, T

    2009-01-01

    In this position paper we describe the concept of geographic relevance and its potential for mobile location-based services employing the mobile Internet. We argue that existing LBS have a too limited concept of location and its application for filtering geographic content. We propose an approach for geographic relevance that extends LBS and location-aware web applications and aims at better supporting mobile users’ decision-making based on geographic information. After a short description of...

  2. The relevance of education today

    OpenAIRE

    Živoder, Andreja

    2014-01-01

    The article interprets the results of qualitative research within the GOETE project. It discusses how 9th grade students relate to the relevance of education today by analysing their educational decisions within the framework of the ideology of choice in contemporary Slovenian society. It attempts to categorise reasons for the relevance of education and provide two typical strategies students employ in order to be able to make educational choices in a socio-economic environment which does not...

  3. Annonacin, a mono-tetrahydrofuran acetogenin, arrests cancer cells at the G1 phase and causes cytotoxicity in a Bax- and caspase-3-related pathway.

    Science.gov (United States)

    Yuan, Shyng-Shiou F; Chang, Hsueh-Ling; Chen, Hsiao-Wen; Yeh, Yao-Tsung; Kao, Ying-Hsien; Lin, Kuei-Hsiang; Wu, Yang-Chang; Su, Jinu-Huang

    2003-05-01

    Annonaceous acetogenins are a group of potential anti-neoplastic agents isolated from Annonaceae plants. In this study, we purified annonacin, a cytotoxic mono-tetrahydrofuran acetogenin, from the seeds of Annona reticulata and analyzed its biological effects. Herein, we have shown that annonacin caused significant cell death in various cancer cell lines. T24 bladder cancer cells at the S phase were more vulnerable to the cytotoxicity of annonacin. Furthermore, annonacin activated p21 in a p53-independent manner and arrested T24 cells at the G1 phase. It also induced Bax expression, enhanced caspase-3 activity, and caused apoptotic cell death in T24 cells. In summary, these results suggest that annonacin is potentially a promising anti-cancer compound. PMID:12697268

  4. Radiocarbon constraints on fossil thinolite tufa formation in the Mono Basin, CA, USA

    Science.gov (United States)

    Leroy, S. L.; Zimmerman, S. R.; Hemming, S. R.; Stine, S.; Guilderson, T. P.

    2009-12-01

    Mono Lake is a terminal lake located at the western edge of the Great Basin, and is famous for its tufa towers. Thinolite, which is thought to be a CaCO3 pseudomorph of ikaite, is found around the Mono Basin in many fossil tufa towers, particularly at elevations above 2000 meters. The subaqueous parent mineral ikaite forms at low temperatures (Mono Basin has yielded a rather small range of ages for the highest elevation towers, between 11.8 and 14.1 14C kyr BP (no corrections for reservoir effects have been made). A thinolite fan collected from outcrops in Mill Creek, just north of the current Mono Lake yielded an age of 10,690 ± 45 14C yr BP (12,750 ± 80 cal yr BP), consistent with a ca. 1000 year reservoir age and coincidence with thinolite crystals found in a core from the northwestern embayment of Mono Lake (Davis, 1999, QR), and thus correlating with the Younger Dryas cooling event as exhibited in the GISP2 δ18O record. While most of the thinolite textures are found at high elevations, we sampled a mound at 1955 meters (near the current shoreline, north of the lake and just east of Black Point) that has many concentric layers, some containing thinolite textures. Although tufa mounds can form very rapidly, the location at low elevation and the presence of at least 19 distinct layers led us to consider that this mound might represent a long term record of Mono Lake’s chemistry. The new data confirm that the mound formed over a long period within the last glacial cycle, with ages ranging beyond the current limits of measurement (>34 kyr) to as young as 15.5 14C kyr BP. In general there is a consistent stratigraphic trend of ages within the mound, but the thinolite ages are anomalously young and one thinolite sample shows a large age reversal. The best estimate of the age of the precipitation of this tufa mound is given by the non-thinolite textures. More work is needed to determine the best sampling and sample preparation strategies in order to get a

  5. Prospective memory research: why is it relevant?

    OpenAIRE

    Kliegel, M; Martin, Mike

    2003-01-01

    Points out that there are at least three reasons why research in prospective memory is highly relevant. Relevance of prospective memory for everyday life; Clinical relevance of prospective memory; Theoretical relevance of prospective memory.

  6. 1. Mono([8]annulene)Uranium(4) half-sandwich complexes, 2. Novel syntheses of symmetrically substituted cyclooctatetetraenes

    International Nuclear Information System (INIS)

    A reproducible, high-yield synthesis of mono([8]annulene)uranium(4)dichloride (1) is reported, along with the X-ray crystal structural of the bis(pyridine) adduct. Metathesis reactions of the half-sandwich complex 1 with a variety of simple alkyl and alkoxy reagents failed to generate any isolable mono-ring complexes. Reactions of 1 with polydentate, delocalized anions did produce stable derivatives, including mono([8]annulene)uranium(4)bis(acetylacetonate) (4). An X-ray crystal structure of 4 is reported

  7. 1. Mono([8]annulene)Uranium(4) half-sandwich complexes, 2. Novel syntheses of symmetrically substituted cyclooctatetetraenes

    Energy Technology Data Exchange (ETDEWEB)

    Boussie, T.R.

    1991-10-01

    A reproducible, high-yield synthesis of mono([8]annulene)uranium(4)dichloride (1) is reported, along with the X-ray crystal structural of the bis(pyridine) adduct. Metathesis reactions of the half-sandwich complex 1 with a variety of simple alkyl and alkoxy reagents failed to generate any isolable mono-ring complexes. Reactions of 1 with polydentate, delocalized anions did produce stable derivatives, including mono([8]annulene)uranium(4)bis(acetylacetonate) (4). An X-ray crystal structure of 4 is reported.

  8. 1. Mono((8)annulene)Uranium(4) half-sandwich complexes, 2. Novel syntheses of symmetrically substituted cyclooctatetetraenes

    Energy Technology Data Exchange (ETDEWEB)

    Boussie, T.R.

    1991-10-01

    A reproducible, high-yield synthesis of mono((8)annulene)uranium(4)dichloride (1) is reported, along with the X-ray crystal structural of the bis(pyridine) adduct. Metathesis reactions of the half-sandwich complex 1 with a variety of simple alkyl and alkoxy reagents failed to generate any isolable mono-ring complexes. Reactions of 1 with polydentate, delocalized anions did produce stable derivatives, including mono((8)annulene)uranium(4)bis(acetylacetonate) (4). An X-ray crystal structure of 4 is reported.

  9. Theoretical principles for biology: organization

    OpenAIRE

    Mossio, Matteo; Montévil, Maël; Longo, Giuseppe

    2016-01-01

    International audience In the search of a theory of biological organisms, we propose to adopt organization as a theoretical principle. Organization constitutes an overarching hypothesis that frames the intelligibility of biological objects, by characterizing their relevant aspects. After a succinct historical survey on the understanding of organization in the organicist tradition, we offer a specific characterization in terms of closure of constraints. We then discuss some implications of ...

  10. Anaerobic biological treatment

    International Nuclear Information System (INIS)

    The Enso-Fenox process has been very successfully used to remove chlorinated phenolic compounds from pulp bleaching effluents. It is a two-stage anaerobic/aerobic process consisting of a nonmethanogenic anaerobic fluidized bed followed by a trickling filter. Studies have been conducted on reductive dechlorination of chlorinated aromatic compounds under anaerobic conditions with chlorinated phenols as the sole carbon and energy source. Approximately 40% of the added chlorophenols was converted to CH4 and CO2. Substrate loading rates were 20 mg/L/d at hydraulic detention times of 2-4 days with 90% substrate conversion efficiency. Reductive dechlorination of mono, di-, tri-, and pentachlorophenols has been demonstrated in anaerobic sewage sludge. The following constituents were tested in the laboratory at their approximate concentrations in coal conversion wastewater (CCWW) and were anaerobically degraded in serum bottles: 1,000 mg/L phenol; 500 mg/L resorcinol; 1,000 mg/L benzoic acid; 500 mg/L p-cresol; 200 mg/L pyridine; 2,000 mg/L benzoic acid; 250 mg/L 40 methylcatechol; 500 mg/L 4-ethylpyridine; and 2,000 mg/L hexanoic acid. A petrochemical may initially exhibit toxicity to an unacclimated population of methane-fermenting bacteria, but with acclimation the toxicity may be greatly reduced or disappear. In addition, the microorganisms may develop the capacity to actually degrade compounds which showed initial toxicity. Since biomass digestion requires a complete consortium of bacteria, it is relevant to study the effect of a given process as well as to individual steps within the process. A toxicant can inhibit the rate-limiting step and/or change the step that is rate-limiting. Both manifestations of toxicity can severely affect the overall process

  11. The Concept of Relevance in IR.

    Science.gov (United States)

    Borlund, Pia

    2003-01-01

    Introduces the concept of relevance as viewed and applied in the context of IR (information retrieval) evaluation by presenting an overview of the multidimensionality and dynamic nature of the concept. Topics include classes and types of relevance; relevance criteria; degrees of relevance; levels of relevance; situational relevance; and…

  12. Biology Notes.

    Science.gov (United States)

    School Science Review, 1982

    1982-01-01

    Presents procedures, exercises, demonstrations, and information on a variety of biology topics including labeling systems, biological indicators of stream pollution, growth of lichens, reproductive capacity of bulbous buttercups, a straw balance to measure transpiration, interaction of fungi, osmosis, and nitrogen fixation and crop production. (DC)

  13. Angular Distributions of U238 Fission Fragments Produced by Mono-Energetic Gamma Rays

    International Nuclear Information System (INIS)

    The angular distribution of U238 fission fragments has been measured using mica plates as detectors. The fission process was induced by mono-energetic gamma rays of the following discrete energies: 6.07, 6.75, 6.80, 7.38, 7.64, 7.73 and 9.00 MeV. The sources of mono-energetic gamma-rays were (n, γ ) reactions on seven different target elements in the SAPHIR reactor of the E.T.H. in Zurich. The gamma-ray line absolute intensities were of the order of 106 photons/cm2s. The neutron and gamma-ray backgrounds were estimated with a bismuth target. (author)

  14. Stochastic resonance in a mono-stable system subject to frequency mixing periodic force and noise

    International Nuclear Information System (INIS)

    The phenomenon of stochastic resonance (SR) in a biased mono-stable system driven by multiplicative and additive white noise and two periodic fields is investigated. Analytic expressions of the signal-to-noise ratio (SNR) for fundamental harmonics and higher harmonics are derived by using the two-state theory. It is shown that the SNR is a non-monotonic function of the intensities of the multiplicative and additive noises, as well as the bias of the mono-stable system and SR appears at both fundamental harmonics and higher harmonics. Moreover, the higher the order of mixed harmonics is, the smaller the SNR values are, that is, the suppression exists for higher harmonics.

  15. Genetic Algorithm and Tabu Search Attack on the Mono-Alphabetic Subsitution Cipher in Adhoc Networks

    Directory of Open Access Journals (Sweden)

    A. K. Verma

    2007-01-01

    Full Text Available With exponential growth of networked system and application such as e-Commerce, the demand for effective Internet security is increasing. Cryptology is the science and study of systems for secret communication. In consists of two complementary fields of study: cryptography and cryptanalysis. This study presents a cryptanalysis method based on Genetic Algorithm and Tabu Search to break a Mono-Alphabetic Substitution Cipher in Adhoc networks. We have also compared and analyzed the performance of these algorithms in automated attacks on Mono-alphabetic Substitution Cipher. The use of Tabu search is largely an unexplored area in the field of Cryptanalysis. A generalized version of these algorithms can be used for attacking other ciphers as well.

  16. Application of k0-based internal mono-standard PGNAA for compositional characterization of cement samples

    International Nuclear Information System (INIS)

    The k0-based internal mono-standard prompt gamma-ray neutron activation analysis (IM-PGNAA) method was used for compositional analysis of a cement standard provided by the International Atomic Energy Agency as a part of inter-laboratory comparison exercise. The PGNAA was also applied to a local cement sample for comparison purpose. The concentration ratios of elements with respect Ca were determined using the internal mono-standard method. The concentration ratios were then converted to the absolute concentrations by determining concentration of Ca in the cement using relative method. Concentrations of 11 elements were determined in both sample and standard of cement. The results of cement standard are found to be in good agreement with the certified values. The uncertainties on the elemental concentrations were in the range of 5-10 %. (author)

  17. Couple Control Model Implementation on Antagonistic Mono- and Bi-Articular Actuators

    CERN Document Server

    Prattico, Flavio; Yamamoto, Shin-ichiroh

    2014-01-01

    Recently, robot assisted therapy devices are increasingly used for spinal cord injury (SCI) rehabilitation in assisting handicapped patients to regain their impaired movements. Assistive robotic systems may not be able to cure or fully compensate impairments, but it should be able to assist certain impaired functions and ease movements. In this study, a couple control model for lower-limb orthosis of a body weight support gait training system is proposed. The developed leg orthosis implements the use of pneumatic artificial muscle as an actuation system. The pneumatic muscle was arranged antagonistically to form two pair of mono-articular muscles (i.e., hip and knee joints), and a pair of bi-articular actuators (i.e., rectus femoris and hamstring). The results of the proposed couple control model showed that, it was able to simultaneously control the antagonistic mono- and bi-articular actuators and sufficiently performed walking motion of the leg orthosis.

  18. Detection and Quantification of Crack in Composite Mono Leaf Spring by Vibration Parameters

    Science.gov (United States)

    Jamadar, Nagendra Iranna; Kivade, Sangshetty Bheemanna; Pedada, Sudhakara Rao

    2016-06-01

    Automobile industries focus for the components alternative to conventional materials with composites. There is high demand for enhanced performance and light weight. The emphasis is given for composite mono leaf spring as potential item as it is made up of glass fibre reinforced plastics despite they are sensitive to damages such as crack, delamination, de-bonding etc., occurred during either manufacturing or in service condition. These damages grow in progression and results in catastrophic failure. This work aims to deal with structural health monitoring to study and analyse the damage levels in composite mono leaf spring such as detection, location and quantification of damage. An experimental investigation has been carried out to evaluate presence and severity of damage by vibration parameters and validated with simulation.

  19. Endospores of B subtilis are pyrogenic and activate Mono Mac 6 cells

    DEFF Research Database (Denmark)

    Moesby, Lise; Hansen, Erik W; Christensen, Jens D;

    2003-01-01

    The monocytic cell line Mono Mac 6 is sensitive to pyrogens and interleukin-6 secretion is induced after exposure to pyrogens. The aim of this study is to examine the pyrogenic activity and the interleukin-6-inducing capacity of the Gram-positive B. subtilis bacteria, endospores and isolated cell...... wall components. Furthermore the involvement of CD14 in activation of interleukin-6 release is investigated. All test substances are pyrogenic in the rabbit pyrogen test. The test substance is incubated with monocytic cells (Mono Mac 6) for 24 h and the secreted interleukin-6 is determined in a...... sandwich immunoassay. B. subtilis bacteria and endospores induce interleukin-6 in a dose-dependent manner. Endospores are less potent than bacteria. Lipoteichoic acid (LTA) isolated from B. subtilis induces interleukin-6 in a dose-dependent manner, whereas muramyl dipeptide (MDP) is unable to induce...

  20. Resurrecting an unsalvageable lower incisor with a mono-block approach

    Directory of Open Access Journals (Sweden)

    Rachit Jain

    2015-01-01

    Full Text Available Contemporary techniques, as well as the availability of bioactive and adhesive materials in endodontics, have helped revivifying teeth that were deemed hopeless. These newer materials and techniques would enable the clinician: (a to predictably stop microbial activity (b to achieve a total corono-apical fluid tight seal and (c to strengthen mutilated teeth by obtaining intra-radicular reinforcement through mono-block effect. This case report demonstrates the successful treatment of a mutilated anterior tooth with the use of bioactive and adhesive materials to obtain a total seal and mono-block effect. This article also shows the use of a simple method in the placement of root filling cement into the root canal.

  1. Chemostat modeling of Escherichia coli persistence in conventionalized mono-associated and streptomycin-treated mice

    DEFF Research Database (Denmark)

    Rang, C.; Midtvedt, T.; Molin, Søren;

    2001-01-01

    the decrease in colony counts, we analyzed our previous results by a chemostat model. The analysis shows that the increasing doubling time alone is sufficient to explain the decrease in colony counts in mono- associated mice, but not in the streptomycin-treated mice. The observed decreasing rate in colony...... counts in streptomycin- treated mice is slower than predicted. Furthermore, whereas the model predicted a decrease to extinction in both mice, the E. coli persist at a frequency 10-80 times higher in streptomycin- treated mice than in mono-associated mice. Thus, while a chemostat model is able to explain...... some of the population dynamics of intestinal bacteria in mice, additional factors not included in the model are stabilizing the system. Because we find that E. coli declines more slowly and to a higher stabilization frequency in streptomycin-treated mice, which have a more diverse flora before...

  2. Absorption of THz electromagnetic wave in two mono-layers of graphene

    Science.gov (United States)

    Reynolds, Cole B.; Shoufie Ukhtary, M.; Saito, Riichiro

    2016-05-01

    Nearly 100% absorption of an electromagnetic (EM) wave in terahertz (THz) frequency is proposed for a system consisting of two mono-layers of graphene. Here, we demonstrate that the system can almost perfectly absorb an EM wave with frequency of 2 THz, even though we have a low electron mobility of roughly 1000 cm2  Vs‑1. The absorption probability is calculated by using the transfer matrix method. We show that the two mono-layers of the graphene system is needed to obtain nearly 100% absorption when the graphene has a relatively low Fermi energy. The absorption dependence on the distance between the graphene layers is also discussed.

  3. Secondary isotope effects in intramolecular catalysis. Mono-p-bromophenyl succinate hydrolysis

    Energy Technology Data Exchange (ETDEWEB)

    Gandour, R.D.; Stella, V.J.; Coyne, M.; Schowen, R.L.; Icaza, E.A.

    1978-04-28

    Kinetic isotope effects have been measured for the intramolecular nucleophilic carboxylate-catalyzed hydrolysis, k/sub s/, of mono-p-bromophenyl succinate and mono-p-bromophenyl succinate-d/sub 4/. The resulting isotope effect, k/sub s//sup h/sub 4///k/sub s//sup d/sub 4//, equals 1.035, a normal effect. This is contrary to what is expected for acyl transfer reactions where the transition-state structure resembles a tetrahedral intermediate. However, the direction of the isotope effect is in agreement with a transition-state structure resembling succinic anhydride. Combining this result with previous kinetic and structural studies, a detailed transition-state structure for the hydrolysis reaction is proposed. 31 references, 2 tables.

  4. Nuclear Research with Mono-Energetic Neutrons at the JRC Monnet Facility

    International Nuclear Information System (INIS)

    The MONNET (MONo energetic NEutron Tower) facility is used for research on neutron-induced reactions with mono-energetic neutrons. MONNET is based on a 7 MV Van-de-Graaff-accelerator, where the accelerated ions, mainly protons and deuterons, are used to produce the neutrons by means of reactions on 7Li, tritium and deuterium-containing targets. Neutrons with energies between practically 0 keV up 10 MeV and between 12.5 and 24 MeV can be produced. However, between En = 7 and 10 MeV and above 19 MeV secondary neutron-producing reactions have to be taken care of. The measurement program focuses on fission research and neutron-induced reaction cross-sections. The MONNET facility also contributes to the nuclear science education and hosts PhD students and post-doc fellows on a regular basis. (author)

  5. Dark Matter searches with Mono-X signatures at the ATLAS experiment

    CERN Document Server

    Tolley, Emma; The ATLAS collaboration

    2016-01-01

    At the LHC dark matter particles can be produced in association with Standard Model particles coming from initial state radiation. Searches for such processes using events with jets, photons or massive gauge bosons recoiling against large missing transverse momentum in ATLAS at 13 TeV are presented. These ``mono-X'' signatures provide powerful probes to dark matter production at the LHC, allowing for the interpretation of results in terms of simplified models with pair production of WIMPs.

  6. Mono-(2-Ethylhexyl) Phthalate (MEHP) Promotes Invasion and Migration of Human Testicular Embryonal Carcinoma Cells1

    OpenAIRE

    Yao, Pei-Li; Lin, Yi-Chen; Richburg, John H.

    2012-01-01

    Testicular dysgenesis syndrome refers to a collection of diseases in men, including testicular cancer, that arise as a result of abnormal testicular development. Phthalates are a class of chemicals used widely in the production of plastic products and other consumer goods. Unfortunately, phthalate exposure has been linked to reproductive dysfunction and has been shown to adversely affect normal germ cell development. In this study, we show that mono-(2-ethylhexyl) phthalate (MEHP) induces mat...

  7. The endocrine disruptor mono-(2-ethylhexyl)phthalate promotes adipocyte differentiation and induces obesity in mice

    OpenAIRE

    Chanjuan Hao; Xuejia Cheng; Hongfei Xia; Xu Ma

    2013-01-01

    The environmental obesogen hypothesis proposes that exposure to endocrine disruptors during developmental ‘window’ contributes to adipogenesis and the development of obesity. MEHP [mono-(2-ethylhexyl) phthalate], a metabolite of the widespread plasticizer DEHP [di-(2-ethylhexyl) phthalate], has been found in exposed organisms and identified as a selective PPARγ (peroxisome-proliferator-activated receptor γ) modulator. However, implication of MEHP on adipose tissue ...

  8. Thyroid Endocrine Disruption in Zebrafish Larvae after Exposure to Mono-(2-Ethylhexyl) Phthalate (MEHP)

    OpenAIRE

    Zhai, Wenhui; Huang, Zhigang; Chen, Li; Feng, Cong; Li, Bei; Li, Tanshi

    2014-01-01

    Phthalates are extensively used as plasticizers in a variety of daily-life products, resulting in widespread distribution in aquatic environments. However, limited information is available on the endocrine disrupting effects of phthalates in aquatic organisms. The aim of the present study was to examine whether exposure to mono-(2-ethylhexyl) phthalate (MEHP), the hydrolytic metabolite of di-(2-ethylhexyl) phthalate (DEHP) disrupts thyroid endocrine system in fish. In this study, zebrafish (D...

  9. MonoStream: A Minimal-Hardware High Accuracy Device-free WLAN Localization System

    OpenAIRE

    Sabek, Ibrahim; Youssef, Moustafa

    2013-01-01

    Device-free (DF) localization is an emerging technology that allows the detection and tracking of entities that do not carry any devices nor participate actively in the localization process. Typically, DF systems require a large number of transmitters and receivers to achieve acceptable accuracy, which is not available in many scenarios such as homes and small businesses. In this paper, we introduce MonoStream as an accurate single-stream DF localization system that leverages the rich Channel...

  10. New concept research on mono-hull compounded ship form with high seakeeping performance

    Institute of Scientific and Technical Information of China (English)

    LIU Ya-dong; LI Ji-de; WANG Qing

    2003-01-01

    The seakeeping performance of a certain ship equipped with semi-submerged bow (SSB) and bow-fins is discussed. The numerical calculations are carried out on a 600t deep-V compound archetypal ship. The results show that the compounded ship form has excellent seakeeping performance and thus it establishes the theoretical foundations for the development of mono-hull compounded ship form with high seakeeping performance.

  11. Mono-(2-Ethylhexyl) Phthalate Induces Oxidative Stress and Inhibits Growth of Mouse Ovarian Antral Follicles1

    OpenAIRE

    Wang, Wei; Craig, Zelieann R.; Basavarajappa, Mallikarjuna S.; Hafner, Katlyn S.; Flaws, Jodi A.

    2012-01-01

    Mono-(2-ethylhexyl) phthalate (MEHP) is the active metabolite of the most commonly used plasticizer, di-(2-ethylhexyl) phthalate, and is considered to be a reproductive toxicant. However, little is known about the effects of MEHP on ovarian antral follicles. Thus, the present study tested the hypothesis that MEHP inhibits follicle growth via oxidative stress pathways. The data indicate that MEHP increases reactive oxygen species (ROS) levels and inhibits follicle growth in antral follicles, w...

  12. Inhibition of respiratory syncytial virus-host cell interactions by mono- and diamidines.

    OpenAIRE

    Dubovi, E. J.; Geratz, J. D.; Shaver, S R; Tidwell, R. R.

    1981-01-01

    Several aromatic mono- and diamidines were found to block cell fusion induced by respiratory syncytial virus. The best inhibitors were able to achieve complete suppression of syncytium formation at a concentration of 1.0 microM. Inhibition occurred in respiratory syncytial virus-infected HEp-2 and CV-1 cells, but the same inhibitors were ineffective in preventing fusion induced by parainfluenza virus type 3. The fusion inhibitors did not reduce single-cycle virus yields, but did reduce multip...

  13. Study of vanadium(4) and (5) complexes with mono- and triethanolamine by infrared spectroscopy

    International Nuclear Information System (INIS)

    IR-absorption spectra of crystalline complexes of vanadium with mono- and triethanolamine have been studied. Analysis of the absorption bands, permits an assumption as to the coordination configuration of the complexes has been done. These complexes are assumed to belong to chelate amino alcoholates with coordination N → V. For compound VOVO2(OC2H4NH2)3, structure with bridge V(IV)-O-V(V) and three pentatomic cycles is proposed

  14. Anomalous Lattice Dynamics of Mono-, Bi-, and Tri-layer WTe2

    OpenAIRE

    Kim, YoungHee; Jhon, Young In; Park, June; Kim, Jae Hun; Lee, Seok; Jhon, Young Min

    2015-01-01

    Tungsten ditelluride (WTe2) is a layered material that exhibits excellent magnetoresistance and thermoelectric behaviors, which are deeply related with its distorted orthorhombic phase that may critically affect the lattice dynamics. Here, for the first time, we present comprehensive characterization of the Raman spectroscopic behavior of WTe2 from bulk to monolayer using experimental and computational methods. We discover that mono and bi-layer WTe2 can be easily identified by Raman spectros...

  15. Systematic Behavior of the Non-dipole Magnetic Field during the 32 ka Mono Lake Excursion

    Science.gov (United States)

    Negrini, R. M.; McCuan, D.; Cassata, W. S.; Channell, J. E.; Verosub, K. L.; Liddicoat, J. C.; Knott, J. R.; Coe, R. S.; Benson, L. V.; Sarna-Wojcicki, A.; Lund, S.; Horton, R.; Lopez, J.

    2012-12-01

    Paleomagnetic excursions are enigmatic phenomena that reveal geodynamo behavior in its transitional state and provide important refinements in age control for the late Pleistocene, a critical time period for the study of paleoclimate and human evolution. We report here on two widely separated, unusually detailed records of the Mono Lake excursion (MLE) from sedimentary sequences dated at 32 ka. One of the records is from Summer Lake, Oregon. The vector components of this new record faithfully reproduce the principle features of the MLE as recorded at the type localities around Mono Lake, CA, though with greater detail and higher amplitude. Radiocarbon dates on bulk organics in the Summer Lake record confirm the 32 ka age of the MLE. The other record is from the marine Irminger Basin off of eastern Greenland and is based on the measurement of discrete samples rather than u-channels. The associated VGP paths of the two records strongly suggest systematic field behavior that includes three loci of nondipole flux whose relative dominance oscillates through time. The staggered sequence followed by the two paths through each flux locus further suggests that both the demise and return of the main field floods zonally during the excursion. The composite path is also compatible with the VGPs of a 32 ka set of lavas from New Zealand and, notably, it does not include VGPs associated with the 40 ka Laschamp excursion. This confirms that these two excursions are distinct events and, more specifically, shows that it is the 32 ka Mono Lake excursion that is recorded in the sediments surrounding Mono Lake rather than the ~40 ka Laschamp excursion.

  16. Strength and nature of hydrogen bonding interactions in mono- and di-hydrated formamide complexes.

    Science.gov (United States)

    Angelina, Emilio L; Peruchena, Nélida M

    2011-05-12

    In this work, mono- and di-hydrated complexes of the formamide were studied. The calculations were performed at the MP2/6-311++G(d,p) level of approximation. The atoms in molecules theory (AIM), based on the topological properties of the electronic density distribution, was used to characterize the different types of bonds. The analysis of the hydrogen bonds (H-bonds) in the most stable mono- and di-hydrated formamide complexes shows a mutual reinforcement of the interactions, and some of these complexes can be considered as "bifunctional hydrogen bonding hydration complexes". In addition, we analyzed how the strength and the nature of the interactions, in mono-hydrated complexes, are modified by the presence of a second water molecule in di-hydrated formamide complexes. Structural changes, cooperativity, and electron density redistributions demonstrate that the H-bonds are stronger in the di-hydrated complexes than in the corresponding mono-hydrated complexes, wherein the σ- and π-electron delocalization were found. To explain the nature of such interactions, we carried out the atoms in molecules theory in conjunction with reduced variational space self-consistent field (RVS) decomposition analysis. On the basis of the local Virial theorem, the characteristics of the local electron energy density components at the bond critical points (BCPs) (the 1/4∇ (2)ρ(b) component of electron energy density and the kinetic energy density) were analyzed. These parameters were used in conjunction with the electron density and the Laplacian of the electron density to analyze the characteristics of the interactions. The analysis of the interaction energy components for the systems considered indicates that the strengthening of the hydrogen bonds is manifested by an increased contribution of the electrostatic energy component represented by the kinetic energy density at the BCP. PMID:21506592

  17. Disturbing law of Intel 80C51 mono-computer system under UWB-EMP field

    International Nuclear Information System (INIS)

    Disturbing law of mono-computer system consisted of Intel80C51, 74LS373, 2764, DAC0832 and μA741 was introduced in UWB-EMP field. In order to find out which circuits among the system, result disturbing time as long as more than ten microseconds, in UWB-EMP field of sustained time only ten nanoseconds over. We respectively researched disturbing law of digital circuits, digital/analog transform circuits and operation amplifier circuits

  18. Mono-ethylhexyl phthalate stimulates prostaglandin secretion in human placental macrophages and THP-1 cells

    OpenAIRE

    Tetz, Lauren M; David M. Aronoff; Loch-Caruso, Rita

    2015-01-01

    Background Diethylhexyl phthalate (DEHP) is widely used as a plasticizer in polyvinyl chloride products. DEHP exposure, which is widespread in the US, increases preterm birth risk; however, the mechanisms driving this relationship are unclear. Because cyclooxygenase-2 (COX-2) dependent prostaglandin synthesis is implicated in preterm birth, we evaluated effects of mono-2-ethylhexyl phthalate (MEHP), the active metabolite of DEHP, on prostaglandin E2 (PGE2) synthesis and COX expression in huma...

  19. Evaluation of a Language Identification System for Mono- and Multi-lingual Text Documents

    OpenAIRE

    Artemenko, Olga; Mandl, Thomas; Shramko, Margaryta; Womser-Hacker, Christa

    2006-01-01

    Language identification an important task for web information retrieval. This paper presents the implementation of a tool for language identification in mono- and multilingual documents. The tool implements four algorithms for language identification. Furthermore, we present a n-gram approach for the identification of languages in multi-lingual documents. An evaluation for monolingual texts of varied length is presented. Results for eight languages including U...

  20. SIMAC - A phosphoproteomic strategy for the rapid separation of mono-phosphorylated from multiply phosphorylated peptides

    DEFF Research Database (Denmark)

    Thingholm, Tine E; Jensen, Ole N; Robinson, Phillip J;

    2008-01-01

    spectrometric analysis, such as immobilized metal affinity chromatography or titanium dioxide the coverage of the phosphoproteome of a given sample is limited. Here we report a simple and rapid strategy - SIMAC - for sequential separation of mono-phosphorylated peptides and multiply phosphorylated peptides from...... and an optimized titanium dioxide chromatographic method. More than double the total number of identified phosphorylation sites was obtained with SIMAC, primarily from a three-fold increase in recovery of multiply phosphorylated peptides....

  1. Priority-Based-Budgeting: A Debacle in a Mono – Cultural Economy

    OpenAIRE

    Omah I.; Okolie J.U.; Aforbunor S. A. N.

    2013-01-01

    The contention of this paper is to highlight the difficulties in implementation of priority-based-budgeting in a mono-cultural economies of the third world countries. To device a means by which the budgetary system could be applied meaningfully and advantageously, linking the conventional/traditional methodology to the neo-supra system. To highlight outstanding advantages of priority-based-budgeting, when cautiously applied and strictly adhered by its norms. It is a neolithic advent of budget...

  2. Biogas production from mono-digestion of maize silage-long-term process stability and requirements.

    Science.gov (United States)

    Lebuhn, M; Liu, F; Heuwinkel, H; Gronauer, A

    2008-01-01

    Biogas production from mono-digestion of maize silage was studied for more than one year in six continuously stirred, daily fed 36 L fermenters. Chemical and microbiological parameters were analysed concomitantly. The reactors acidified already after 8 months of operation at a low organic loading rate (OLR) of 2 g VS*(L*d)(-1). The TVA/TAC ratio was the most reliable parameter to indicate early process instabilities leading to acidification. A TVA/TAC threshold of 0.5 should not be exceeded. After acidification and recovery of the fermenters, propionic acid was no reliable parameter anymore to indicate process failure, since values far below the threshold of 1 g*L(-1) were obtained although the process had collapsed.The acidified reactors recovered better, showed greatly improved stability and allowed a higher OLR when a trace element (TE) cocktail was supplemented. Hydrolysis was obviously not process-limiting, results indicated that methanogens were affected. The most limiting element in long-term mono-digestion of maize silage turned out to be cobalt, but data obtained suggest that molybdenum and selenium should also be provided. TE supplementation should be designed specifically in order to meet the actual needs. TE availability for the biocenosis appears to be a key issue in biogas production, not only in mono-but also in co-digestion processes. PMID:19001720

  3. Unique Intramolecular Electronic Communications in Mono-ferrocenylpyrimidine Derivatives: Correlation between Redox Properties and Structural Nature

    International Nuclear Information System (INIS)

    Highlights: • Unique intramolecular electronic communications (electron withdrawing and π-bond delocalization effects) exist in the mono-ferrocenylpyrimidine derivatives. • The redox potential shift correlates the pyrimidine ring torsion angle with the extent of electron delocalization. • The correlation between redox properties and structural nature in mono-ferrocenylpyrimidine derivatives is evident. - Abstract: The correlation between redox properties and structural nature in a complete set of mono-ferrocenylpyrimidine derivatives (2-ferrocenylpyrimidine, 2-FcPy; 4-ferrocenylpyrimidine, 4-FcPy; 5-ferrocenylpyrimidine, 5-FcPy) was evaluated by investigating the intramolecular electronic communications. Both conventional electrochemical measurements in organic solvents and thin-film voltammetric studies of these compounds were carried out. It was discovered that their formal potentials are significantly different from each other, and shift negatively in the order of 4-FcPy > 5-FcPy > 2-FcPy. This result suggests that the intramolecular electronic communication is dictated by the delocalization effect of the π-bonding systems in 2-FcPy, and that the electron-withdrawing effect of the nitrogen atoms in the pyrimidine ring plays the key role in 4-FcPy and 5-FcPy. The single crystal X-ray structure analyis and Density Functional Theory (DFT) calculation provided additional evidence (e.g., different torsion angles between the cyclopentadienyl and pyrimidine rings) to support the observed correlation between the redox properties and structural nature

  4. Controlled modification of mono- and bilayer graphene in O2, H2 and CF4 plasmas

    International Nuclear Information System (INIS)

    In this work, covalent modification of mono- and bilayer graphene is achieved using tetrafluoromethane (CF4), oxygen and hydrogen RF plasma. Controlled modification of graphene is usually difficult to achieve, in particular with oxygen plasma, which is rather aggressive and usually leads to etching of graphene. Here we use x-ray photoelectron spectroscopy and Raman spectroscopy to show that mild plasma conditions and fine tuning of the number of functional groups can be obtained in all plasmas by varying parameters such as exposure time and sample position inside the chamber. We found that even for the usual harsh oxygen treatment the defect density could be lowered, down to one defect for 3.5 × 104 carbon atoms. Furthermore, we show that CF4 plasma leads to functionalization without etching and that graphene becomes an insulator at saturation coverage. In addition, the reactivity of mono- and bilayer graphene was studied revealing faster modification of monolayer in oxygen and CF4 plasma, in agreement with previous works. In contrast, similar modification rates were observed for both mono- and bilayer during hydrogenation. We attribute this discrepancy to the presence of more energetic species in the hydrogen plasma such as positive ions that could play a role in the functionalization process. (paper)

  5. Simulation of gas hydrogen diffusion through partially water saturated mono-modal materials

    International Nuclear Information System (INIS)

    Concerning the disposal of nuclear wastes, it is important to design concrete envelopes with pore networks that allow the diffusion of hydrogen towards the outside. This work documents the relationship between geo-polymers, which are materials with a quasi mono-modal pore network, and their gaseous diffusivity capacities. Using a mono-modal material allows studying a specific pore size contribution to gaseous diffusion. The pore network is characterized by mercury porosimetry. These experimental results are used as data in a model named MOHYCAN. The modeling work consists of creating a virtual pore network. Then, water layers are deposited in this network to simulate variable water saturation levels. Finally hydrogen is transported through the virtual network using a combination of ordinary diffusion and Knudsen diffusion. MOHYCAN calculates the hydrogen diffusion coefficient for water saturation degree from 0% to 100%. The impacts of the pore network arrangement or the pore network discretization have been studied. The results are, for a quasi mono-modal material: -) the diffusion coefficient is not sensitive to different virtual pore network arrangement; -) the diffusion coefficient values have a sharp drop at specific water saturation (this is due to the water saturation of the main and unique pore family); -) a 2 pores family based model is sufficient to represent the pore network. Theses observations will not be valid if we consider a material with a large pore size distribution, like cementitious materials

  6. Arsenic speciation in Mono Lake, California: Response to seasonal stratification and anoxia

    Science.gov (United States)

    Hollibaugh, James T.; Carini, Steve; Gürleyük, Hakan; Jellison, Robert; Joye, Samantha B.; LeCleir, Gary; Meile, Christof; Vasquez, Lydia; Wallschläger, Dirk

    2005-04-01

    Mono Lake is a closed-basin, alkaline, hypersaline lake located at the western edge of the Great Basin in eastern California. We studied the distribution of arsenic (As) species in the water column of Mono Lake between February and November, 2002. This period captured the seasonal progression from winter mixing, through summer thermal stratification, to autumn overturn. Arsenic speciation was determined by ion chromatography-inductively coupled-plasma-mass spectrometry of samples preserved in the field by flash-freezing in liquid nitrogen. We found that arsenic speciation was dominated (>90%) by arsenate when oxygen was detectable. Once levels fell below 6 μmol/L O 2, arsenic speciation shifted to dominance by reduced species. Arsenate and arsenite co-occurred in a transition zone immediately below the base of the oxycline and low but significant concentrations of arsenate were occasionally detected in sulfidic hypolimnion samples. Thio-arsenic species were the dominant form of As found in sulfidic waters. Maxima of thio-arsenic species with stoichiometries consistent with mono-, di- and trithio-arsenic occurred in succession as sulfide concentration increased. A compound with a stoichiometry consistent with trithio-arsenic was the dominant As species (˜50% of total As) in high sulfide (2 mmol/L) bottom water. Lower concentrations of total As in bottom water relative to surface water suggest precipitation of As/S mineral phases in response to sulfide accumulation during prolonged anoxia.

  7. Electrochemical and spectroelectrochemical properties of novel lutetium(III) mono- and bis-phthalocyanines

    International Nuclear Information System (INIS)

    Highlights: • Lu(III) mono- and bis-phthalocyanines were synthesized. • Electrochemical properties of the complexes were investigated. • Electron donating sulfur on complexes improved the wavelength of Q-band. • Electrochemical effects of the substituents’ position were investigated. • Complexes have distinct color changes during redox reactions. -- Abstract: Peripherally and non-peripherally substituted mono and sandwich lutetium(III) phthalocyanines bearing 3,4-(dimethoxyphenylthio) substituents have been synthesized and characterized by elemental analysis, FT-IR, UV–vis spectroscopy and mass spectroscopy. Voltammetric, in-situ spectroelectrochemical, and in-situ electrocolorimetric characterization of the newly synthesized phthalocyanines were performed in solution. Changing the number and the position the substituents altered the reversibility of the electron transfer processes and affected the easy of electron transfer reactions. While the mono phthalocyanines had an oxidation–reduction peak separation (ΔE1/2) higher that 1.50 V, this value decreased up to 0.36 V due to the π–π interaction of phthalocyanine rings around the lutetium core. Solvent of the electrolytic system also affected the redox behaviors of the complexes considerably. In-situ electrocolorimetric method was applied to investigate the color of the electrogenerated anionic and cationic forms of the complexes for their possible electrochromic applications

  8. Cation coordination in mono-urethanesil hybrids doped with sodium triflate

    International Nuclear Information System (INIS)

    Infrared and Raman spectroscopies were used to elucidate the cation/polyether, cation/urethane, cation/anion and hydrogen bonding interactions occurring in poly(oxyethylene), POE/siloxane materials doped with sodium triflate (NaCF3SO3). The hybrid host matrix of these xerogels (mono-urethanesils) is composed of methyl terminated POE chains (with about 17 repeat units) grafted through urethane groups to the siliceous framework. Samples with n≥3 (where n is the molar ratio of oxyethylene moieties per Na+ ion) were examined. The results obtained demonstrate that the POE chains of the host framework participate actively in the complexation of the alkali ions in the mono-urethanesils with n≤10. In the more dilute compounds, while a few cations coordinate to the carbonyl oxygen atoms of the urethane linkages, the great majority will bond to the oxygen atoms of the triflate ions, producing ion contact pairs, negatively charged triplets and an ionic aggregate. In the xerogels with n=6 and 3, these ionic species coexist with positively charged triplets and another aggregate. The crystalline POE1.1NaCF3SO3 compound is formed in the latter materials. This study provides conclusive evidence that the nature of the cations incorporated in the mono-urethanesil-type structure plays a major role in the properties of these composites

  9. Validation of the calculation of the clearance rate constant (k{sub mono}) of [{sup 11}C]acetate using parametric k{sub mono} image for myocardial oxidative metabolism

    Energy Technology Data Exchange (ETDEWEB)

    Hussain, Raihan [Biomedical Imaging Research Center, University of Fukui, Fukui (Japan)], E-mail: raihan_h@yahoo.com; Kudo, Takashi [Biomedical Imaging Research Center, University of Fukui, Fukui (Japan)], E-mail: tkudo@u-fukui.ac.jp; Tsujikawa, Testuya; Kobayashi, Masato; Fujibayashi, Yasuhisa; Okazawa, Hidehiko [Biomedical Imaging Research Center, University of Fukui, Fukui (Japan)

    2009-11-15

    Introduction: The purpose of this study was to validate the calculation of myocardial oxidative metabolism rate using a parametric clearance rate constant (k{sub mono}) image. Methods: Fifteen subjects (seven volunteers, eight patients) were studied. Dynamic PET was acquired after intravenous injection of 700 MBq of [{sup 11}C]acetate. The clearance rate constant of [{sup 11}C]acetate (k{sub mono}) was calculated pixel by pixel to generate the parametric k{sub mono} image. The k{sub mono} values from this image and those calculated from the dynamic image were compared in the same regions of interest (ROIs). Results: Two different methods showed an excellent correlation except in the very low range. Regression equations were y=0.99x+0.0034 (r{sup 2}=0.86, P<.001) and y=1.16x-0.0077 (r{sup 2}=0.87, P<.001) in normal volunteer and patient groups, respectively, and y=1.07x-0.0019 (r{sup 2}=0.87, P<.001) when combined. Conclusions: Both methods exhibited similar values of k{sub mono}. Parametric k{sub mono} image may result in better visual understanding of regional myocardial oxidative metabolism.

  10. The synthesis of mono-6-thio-β-cyclodextrin capped CdTe QDs and its interaction with neutral red

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    This paper presents a novel method for the synthesis of CdTe quantum dots (QDs) capped with β-cyclodextrin in aqueous solution using both TGA and mono-6-thio-β-CD as stabilizers.The interaction between mono-6-thio-β-CD-CdTe QDs and neutral red (NR) was studied with fluorescence,UV-absorption and the resonance Rayleigh scattering spectrum.When its concentration was over 7.5 × 10-6 mol/L,the neutral red began to aggregate on the surface of the mono-6-thio-β-CD-CdTe QDs,which resulted in the mono-6-thio-β-CD-CdTe QDs particle size increasing,the sharply quenched fluorescence,and the marked increase of RRS intensity.

  11. Symptoms and Immune Markers in Plasmodium/Dengue Virus Co-infection Compared with Mono-infection with Either in Peru

    Science.gov (United States)

    Halsey, Eric S.; Baldeviano, G. Christian; Edgel, Kimberly A.; Vilcarromero, Stalin; Sihuincha, Moises; Lescano, Andres G.

    2016-01-01

    Background Malaria and dengue are two of the most common vector-borne diseases in the world, but co-infection is rarely described, and immunologic comparisons of co-infection with mono-infection are lacking. Methodology and Principal Findings We collected symptom histories and blood specimens from subjects in a febrile illness surveillance study conducted in Iquitos and Puerto Maldonado, Peru, between 2002–2011. Nineteen symptoms and 18 immune markers at presentation were compared among those with co-infection with Plasmodium/dengue virus (DENV), Plasmodium mono-infection, and DENV mono-infection. Seventeen subjects were identified as having Plasmodium/DENV co-infection and were retrospectively matched with 51 DENV mono-infected and 44 Plasmodium mono-infected subjects. Those with Plasmodium mono-infection had higher levels of IL-4, IL-6, IL-10, IL-12, IL-13, IL-17A, IFN-γ, and MIP1-α/CCL3 compared with DENV mono-infection or co-infection; those with Plasmodium mono-infection had more cough than those with DENV mono-infection. Subjects with DENV mono-infection had higher levels of TGF-β1 and more myalgia than those with Plasmodium mono-infection. No symptom was more common and no immune marker level was higher in the co-infected group, which had similar findings to the DENV mono-infected subjects. Conclusions/Significance Compared with mono-infection with either pathogen, Plasmodium/DENV co-infection was not associated with worse disease and resembled DENV mono-infection in both symptom frequency and immune marker level. PMID:27128316

  12. Quantum Biology

    Directory of Open Access Journals (Sweden)

    Alessandro Sergi

    2009-06-01

    Full Text Available A critical assessment of the recent developmentsof molecular biology is presented.The thesis that they do not lead to a conceptualunderstanding of life and biological systems is defended.Maturana and Varela's concept of autopoiesis is briefly sketchedand its logical circularity avoided by postulatingthe existence of underlying living processes,entailing amplification from the microscopic to the macroscopic scale,with increasing complexity in the passage from one scale to the other.Following such a line of thought, the currently accepted model of condensed matter, which is based on electrostatics and short-ranged forces,is criticized. It is suggested that the correct interpretationof quantum dispersion forces (van der Waals, hydrogen bonding, and so onas quantum coherence effects hints at the necessity of includinglong-ranged forces (or mechanisms for them incondensed matter theories of biological processes.Some quantum effects in biology are reviewedand quantum mechanics is acknowledged as conceptually important to biology since withoutit most (if not all of the biological structuresand signalling processes would not even exist. Moreover, it is suggested that long-rangequantum coherent dynamics, including electron polarization,may be invoked to explain signal amplificationprocess in biological systems in general.

  13. Anomalous Raman scattering and lattice dynamics in mono- and few-layer WTe2

    Science.gov (United States)

    Kim, Younghee; Jhon, Young In; Park, June; Kim, Jae Hun; Lee, Seok; Jhon, Young Min

    2016-01-01

    Tungsten ditelluride (WTe2) is a layered material that exhibits excellent magnetoresistance and thermoelectric behaviors, which are deeply related with its distorted orthorhombic phase that may critically affect the lattice dynamics of this material. Here, we report comprehensive characterization of Raman spectra of WTe2 from bulk to monolayer using experimental and computational methods. We find that mono and bi-layer WTe2 are easily identified by Raman spectroscopy since two or one Raman modes that are observed in higher-layer WTe2 are greatly suppressed below the noise level in the mono- and bi-layer WTe2, respectively. In addition, the frequency of in-plane A17 mode of WTe2 remains almost constant as the layer number decreases, while all the other Raman modes consistently blueshift, which is completely different from the vibrational behavior of hexagonal metal dichalcogenides. First-principles calculation validates experimental results and reveals that anomalous lattice vibrations in WTe2 are attributed to the formation of tungsten chains that make WTe2 structurally one-dimensional.Tungsten ditelluride (WTe2) is a layered material that exhibits excellent magnetoresistance and thermoelectric behaviors, which are deeply related with its distorted orthorhombic phase that may critically affect the lattice dynamics of this material. Here, we report comprehensive characterization of Raman spectra of WTe2 from bulk to monolayer using experimental and computational methods. We find that mono and bi-layer WTe2 are easily identified by Raman spectroscopy since two or one Raman modes that are observed in higher-layer WTe2 are greatly suppressed below the noise level in the mono- and bi-layer WTe2, respectively. In addition, the frequency of in-plane A17 mode of WTe2 remains almost constant as the layer number decreases, while all the other Raman modes consistently blueshift, which is completely different from the vibrational behavior of hexagonal metal dichalcogenides

  14. Mono Lake Excursion in Cored Sediment from the Eastern Tyrrhenian Sea

    Science.gov (United States)

    Liddicoat, Joseph; Iorio, Marina; Sagnotti, Leonardo; Incoronato, Alberto

    2013-04-01

    A search for the Laschamp and Mono Lake excursions in cored marine and lacustrine sediment younger than 50,000 years resulted in the discovery of both excursions in the Greenland Sea (73.3˚ N, 351.0˚ E, Nowaczyk and Antanow, 1997), in the North Atlantic Ocean (62.7˚ N, 222.5˚ E, Channell, 2006), in Pyramid Lake in the Lahontan Basin, NV, USA (40.1˚ N, 240.2˚ E, Benson et al., 2008), and in the Black Sea (43.2˚ N, 36.5˚ E, Nowaczyk et al., 2012). The inclination, declination, and relative field intensity during the Mono Lake Excursion (MLE) in the Black Sea sediment matches well the behaviour of the excursion in the Mono Basin, CA, in that a reduction in inclination during westerly declination is soon followed by steep positive inclination when declination is easterly, and relative field intensity increases after a low at the commencement of the excursion (Liddicoat and Coe, 1979). A large clockwise loop of Virtual Geomagnetic Poles (VGPs) at the Black Sea when followed from old to young patterns very well the VGP loop formed by the older portion of the MLE in the Mono Basin (Liddicoat and Coe, 1979). We also searched for the MLE in cored sediment from the eastern Tyrrhenian Sea (40.1˚ N, 14.7˚ E) where the age of the sediment is believed to be about 32,000 years when comparing the susceptibility in the core with the susceptibility in a nearby one that is dated by palaeomagnetic secular variation records, Carbon-14, and numerous tephra layers in the Tyrrhenian Sea sediment (Iorio et al., 2011). In the Tyrrhenian Sea core, called C1067, closely spaced samples demagnetized in an alternating field to100 mT record a shallowing of positive inclination to 48˚ that is followed by steep positive inclination of 82˚ when declination moves rapidly to the southeast. The old to young path of the VGPs in C1067 forms a narrow counter-clockwise loop that reaches 30.3˚ N, 30.8˚ E and that is centered at about 55˚ N, 15˚ E. Although descending to a latitude that is

  15. Possible Recording of the Hilina Pali Excursion in the Mono Basin, California

    Science.gov (United States)

    Coe, R.; Liddicoat, J.

    2012-04-01

    Inclination of about negative 40˚ in basalt from Kilauea volcano, Hawaii (Teanby et al., 2002), that is assigned an age of about 18,000 radiocarbon years (uncorrected)(Coe et al., 1978, after Rubin and Berthold, 1961) and an excursion in northeastern China at Changbaishan Volcano of similar age from Ar40/Ar39 dates (Singer et al., 2011) that was interpreted to be the Blake Subchron (Zhu et al., 2000) using K/Ar (Liu, 1987) and Ar40/39 dates (Lin, 1999), might be recorded as shallow positive inclination in lacustrine siltstone in the bank of Wilson Creek in the Mono Basin, CA. The siltstone was deposited in Pleistocene Lake Russell, of which Mono Lake is the remnant, and was exposed when Wilson Creek was incised as the shoreline of Mono Lake receded (Lajoie, 1968). Basaltic and rhyolitic volcanic ash layers exposed in the bank of the creek are stratigraphic markers that have been important for studies of the Mono Lake Excursion (Denham and Cox, 1971; Liddicoat and Coe, 1979; Liddicoat, 1992; Coe and Liddicoat, 1994) and Pleistocene climate in the U.S. Great Basin (Zimmerman et al., 2006). Those ash layers likewise are useful for locating paleomagnetic directions along strike that might be the negative inclination in Hawaii named the Hilina Pali Excursion (Teanby et al., 2002). The portion of the lacustine section exposed along Wilson Creek that is of interest records waveform Delta in Lund et al. (1988) in Subunit E of Lajoie (1993) that is bracketed by ash layers 12 and 13; in Lajoie (1968), those ash layers are numbered 8 and 7, respectively. About midway in Subunit E, which has a thickness of 1.1 m, the inclination is about 15˚ in four back-to-back horizons that span 8 cm. The subsamples, each 2 cm thick, were treated by either alternating field or thermal demagnetization. The Virtual Geomagnetic Pole (VGP) for the horizon with the shallowest inclination (14.9˚) is 53.8˚ N, 22.7˚ E (n = 6, Alpha-95 = 2.3˚), and the VGPs within waveform Delta when followed

  16. Culturally and Linguistically Relevant Readalouds

    Science.gov (United States)

    May, Laura A.; Bingham, Gary E.; Pendergast, Meghan L.

    2014-01-01

    The teacher readaloud is an instructional tool established in its ability to foster children's language and literacy development. Increasing cultural and linguistic diversity and changing standards place pressure on teachers to provide literacy and language instruction relevant to children's everyday lives and learning. This article…

  17. Quantum Biology

    CERN Document Server

    Sergi, Alessandro

    2009-01-01

    A critical assessment of the recent developments of molecular biology is presented. The thesis that they do not lead to a conceptual understanding of life and biological systems is defended. Maturana and Varela's concept of autopoiesis is briefly sketched and its logical circularity avoided by postulating the existence of underlying {\\it living processes}, entailing amplification from the microscopic to the macroscopic scale, with increasing complexity in the passage from one scale to the other. Following such a line of thought, the currently accepted model of condensed matter, which is based on electrostatics and short-ranged forces, is criticized. It is suggested that the correct interpretation of quantum dispersion forces (van der Waals, hydrogen bonding, and so on) as quantum coherence effects hints at the necessity of including long-ranged forces (or mechanisms for them) in condensed matter theories of biological processes. Some quantum effects in biology are reviewed and quantum mechanics is acknowledge...

  18. Validation of the prognostic Heidelberg re-irradiation score in an independent mono-institutional patient cohort

    International Nuclear Information System (INIS)

    Re-irradiation has been shown to be a valid option with proven efficacy for recurrent high-grade glioma patients. Overall, up to now it is unclear which patients might be optimal candidates for a second course of irradiation. A recently reported prognostic score developed by Combs et al. may guide treatment decisions and thus, our mono-institutional cohort served as validation set to test its relevance for clinical practice. The prognostic score is built upon histology, age (< 50 vs. ≥ 50 years) and the time between initial radiotherapy and re-irradiation (≤ 12 vs. > 12 months). This score was initially introduced to distinguish patients with excellent (0 points), good (1 point), moderate (2 points) and poor (3–4 points) post-recurrence survival (PRS) after re-irradiation. Median prescribed radiation dose during re-treatment of recurrent malignant glioma was 36 Gy in 2 Gy single fractions. A substantial part of the patients was additionally treated with bevacizumab (10 mg/kg intravenously at d1 and d15 during re-irradiation). 88 patients (initially 61 WHO IV, 20 WHO III, 7 WHO II) re-irradiated in a single institution were retrospectively analyzed. Median follow-up was 30 months and median PRS of the entire patient cohort 7 months. Seventy-one patients (80.7%) received bevacizumab. PRS was significantly increased in patients receiving bevacizumab (8 vs. 6 months, p = 0.027, log-rank test). KPS, age, MGMT methylation status, sex, WHO grade and the Heidelberg score showed no statistically significant influence on neither PR-PFS nor PRS. In our cohort which was mainly treated with bevacizumab the usefulness of the Heidelberg score could not be confirmed probably due to treatment heterogeneity; it can be speculated that larger multicentric data collections are needed to derive a more reliable score

  19. Mono Lake Excursion as a Chronologic Marker in the U.S. Great Basin

    Science.gov (United States)

    Liddicoat, J. C.; Coe, R. S.; Knott, J. R.

    2008-05-01

    Nevada, Utah, and California east of the Sierra Nevada are in the Great Basin physiographic province of western North America. During periods of the Pleistocene, Lake Bonneville and Lake Lahontan covered valleys in Utah and Nevada, respectively, and other lakes such as Lake Russell in east-central California did likewise (Feth, 1964). Now dry except for its remnant, Mono Lake, Lake Russell provides an opportunity to study behavior of Earth's past magnetic field in lacustrine sediments that are exposed in natural outcrops. The sediments record at least 30,000 years of paleomagnetic secular variation (Liddicoat, 1976; Zimmerman et al., 2006) and have been of particular interest since the discovery of the Mono Lake Excursion (MLE) by Denham and Cox (1971) because the field behavior can be documented at numerous sites around Mono Lake (Liddicoat and Coe, 1979, Liddicoat, 1992; Coe and Liddicoat, 1994) and on Paoha Island in the lake. Moreover, there have been recent attempts to date the excursion (Kent et al., 2002, Benson et al., 2003) more accurately and use the age and relative field intensity in paleoclimate research (Zimmerman et al., 2006). It has been proposed that the excursion in the Mono Basin might be older than originally believed (Denham and Cox, 1971; Liddicoat and Coe, 1979) and instead be the Laschamp Excursion (LE), ~ 40,000 yrs B.P. (Guillou et al., 2004), on the basis of 14C and 40Ar/39Ar dates (Kent et al., 2002) and the relative paleointensity record (Zimmerman et al., 2006) for the excursion in the Mono Basin. On the contrary, we favor a younger age for the excursion, ~ 32,000 yrs B.P., using the relative paleointensity at the Mono and Lahontan basins and 14C dates from the Lahontan Basin (Benson et al., 2003). The age of ~ 32,000 yrs B.P. is in accord with the age (32,000-34,000 yrs B.P.) reported by Channell (2006) for the MLE at Ocean Drilling Program (ODP) Site 919 in the Irminger Basin in the North Atlantic Ocean, which contains as well an

  20. Biology Attitude Scale

    OpenAIRE

    YEŞİLYURT, Selami; GÜL, Şeyda

    2009-01-01

    The aim of this study is to develop a scale determining secondary school stu- dent’s attitude towards biology. For this aim, at first, totally 92 scale items were prepared by reviewing relevant literature. 88 items in this scale were a five-point Likert type scale. 4 of 92 items consisted of demographic variables. The scale was applied to a sample of 109 students randomly selected from two secondary schools in Erzurum. At the end of this application, SPSS 12.0 Statistical Program was used to ...

  1. "Concept and Relevance of Income"

    OpenAIRE

    Takashi Obinata

    2002-01-01

    Recently, many people criticize the traditionally accepted principles of realization, matching, and allocation. In addition, the reporting performance project in the International Accounting Standards Board (IASB) is willing to substitute the extant concept of net income for the unexperienced concept of comprehensive income with prohibition of recycling of other comprehensive income. On the other hand, the usefulness or relevance of net income has been repeatedly ascertained in empirical stud...

  2. Epistemic Logic with Relevant Agents

    Czech Academy of Sciences Publication Activity Database

    Peliš, Michal

    London : College Publications, 2009 - (Peliš, M.), s. 123-135 ISBN 978-1-904987-46-8. [ Logica 2008. Hejnice (CZ), 16.06.2008-20.06.2008] R&D Projects: GA AV ČR(CZ) IAA900090703; GA ČR(CZ) GA401/07/0904 Institutional research plan: CEZ:AV0Z90090514 Keywords : relevant logic * epistemic logic * modal logic Subject RIV: AA - Philosophy ; Religion

  3. Relevant Explanations: Allowing Disjunctive Assignments

    OpenAIRE

    Shimony, Solomon Eyal

    2013-01-01

    Relevance-based explanation is a scheme in which partial assignments to Bayesian belief network variables are explanations (abductive conclusions). We allow variables to remain unassigned in explanations as long as they are irrelevant to the explanation, where irrelevance is defined in terms of statistical independence. When multiple-valued variables exist in the system, especially when subsets of values correspond to natural types of events, the over specification problem, alleviated by inde...

  4. Crossing Boundaries in Undergraduate Biology Education

    Science.gov (United States)

    Vanderklein, Dirk; Munakata, Mika; McManus, Jason

    2016-01-01

    In an effort to make mathematics relevant to biology students, the authors developed two modules that sought to integrate mathematics and ecology instruction to differing degrees. The modules were developed by a team of biology and mathematics educators and were implemented in an ecology course using three different instructional methods for three…

  5. Brief Review on the Relevance Theory

    Institute of Scientific and Technical Information of China (English)

    龚腾龙; 阿勒腾

    2015-01-01

    Relevance theory has had an impact on the study in various disciplines including linguistics,literature and so on. This paper gives a brief review of the relevance theory and two principles of relevance.

  6. Relevance of rhodopsin studies for GPCR activation.

    Science.gov (United States)

    Deupi, Xavier

    2014-05-01

    GPCRs, or the most detailed analysis of cellular GPCR signal transduction networks using a systems biology approach, have been carried out in rhodopsin. Finally, due again to its unique properties among GPCRs, rhodopsin will likely play an important role in the application of X-ray free electron laser crystallography to time-resolved structural biology in membrane proteins. Rhodopsin, thus, still remains relevant as a model system to study the molecular mechanisms of GPCR activation. This article is part of a Special Issue entitled: Retinal Proteins-You can teach an old dog new tricks. PMID:24041646

  7. Biological Oceanography

    Science.gov (United States)

    Abbott, M. R.

    1984-01-01

    Within the framework of global biogeochemical cycles and ocean productivity, there are two areas that will be of particular interest to biological oceanography in the 1990s. The first is the mapping in space time of the biomass and productivity of phytoplankton in the world ocean. The second area is the coupling of biological and physical processes as it affects the distribution and growth rate of phytoplankton biomass. Certainly other areas will be of interest to biological oceanographers, but these two areas are amenable to observations from satellites. Temporal and spatial variability is a regular feature of marine ecosystems. The temporal and spatial variability of phytoplankton biomass and productivity which is ubiquitous at all time and space scales in the ocean must be characterized. Remote sensing from satellites addresses these problems with global observations of mesocale (2 to 20 days, 10 to 200 km) features over a long period of time.

  8. Biological preconcentrator

    Science.gov (United States)

    Manginell, Ronald P.; Bunker, Bruce C.; Huber, Dale L.

    2008-09-09

    A biological preconcentrator comprises a stimulus-responsive active film on a stimulus-producing microfabricated platform. The active film can comprise a thermally switchable polymer film that can be used to selectively absorb and desorb proteins from a protein mixture. The biological microfabricated platform can comprise a thin membrane suspended on a substrate with an integral resistive heater and/or thermoelectric cooler for thermal switching of the active polymer film disposed on the membrane. The active polymer film can comprise hydrogel-like polymers, such as poly(ethylene oxide) or poly(n-isopropylacrylamide), that are tethered to the membrane. The biological preconcentrator can be fabricated with semiconductor materials and technologies.

  9. Seed mediated synthesis of highly mono-dispersed gold nanoparticles in the presence of hydroquinone

    Science.gov (United States)

    Kumar, Dhiraj; Mutreja, Isha; Sykes, Peter

    2016-09-01

    Gold nanoparticles (AuNPs) are being studied for several biomedical applications, including drug delivery, biomedical imaging, contrast agents and tumor targeting. The synthesis of nanoparticles with a narrow size distribution is critical for these applications. We report the synthesis of highly mono-dispersed AuNPs by a seed mediated approach, in the presence of tri-sodium citrate and hydroquinone (HQ). AuNPs with an average size of 18 nm were used for the synthesis of highly mono-dispersed nanocrystals of an average size 40 nm, 60 nm, 80 nm and ∼100 nm; but the protocol is not limited to these sizes. The colloidal gold was subjected to UV–vis absorbance spectroscopy, showing a red shift in lambda max wavelength, peaks at 518.47 nm, 526.37 nm, 535.73 nm, 546.03 nm and 556.50 nm for AuNPs seed (18 nm), 40 nm, 60 nm, 80 nm and ∼100 nm respectively. The analysis was consistent with dynamic light scattering and electron microscopy. Hydrodynamic diameters measured were 17.6 nm, 40.8 nm, 59.8 nm, 74.1 nm, and 91.4 nm (size by dynamic light scattering—volume %); with an average poly dispersity index value of 0.088, suggesting mono-dispersity in the size distribution, which was also confirmed by transmission electron microscopy analysis. The advantage of a seed mediated approach is a multi-step growth of nanoparticle size that enables us to control the number of nanoparticles in the suspension, for size ranging from 24.5 nm to 95.8 nm. In addition, the HQ-based synthesis of colloidal nanocrystals allowed control of the particle size and size distribution by tailoring either the number of seeds, amount of gold precursor or reducing agent (HQ) in the final reaction mixture.

  10. Escitalopram tolerability as mono- versus augmentative therapy in patients with affective disorders: a naturalistic study

    Directory of Open Access Journals (Sweden)

    Dell'Osso B

    2013-02-01

    Full Text Available Bernardo Dell’Osso, Chiara Arici, Cristina Dobrea, Giulia Camuri, Beatrice Benatti, A Carlo AltamuraUniversity of Milan, Department of Psychiatry, Fondazione IRCSS Ca’ Granda, Ospedale Maggiore Policlinico, Milano, ItalyBackground: Escitalopram is a selective serotonin reuptake inhibitor, widely used in the treatment of affective disorders. The purpose of this study was to examine its safety and tolerability, as mono- versus augmentative therapy, in a group of patients with affective disorders.Materials and methods: The sample consisted of 131 patients suffering from different affective disorders, including major depressive disorder, bipolar disorder, and generalized anxiety disorder, who received escitalopram for at least 4 weeks. Data were analyzed on the basis of mono- versus augmentative therapy, as well as age, gender, mean daily dosage, and patterns of combination therapy.Results: Sixty-seven (51.1% patients were treated with monotherapy (mean dose of 11.76 mg/day and 64 (48.9% with augmentative escitalopram (mean dose of 12.81 mg/day. The mean duration of escitalopram treatment was 14 months. The most frequently combined compounds were: other antidepressants (36.5%, mood stabilizers (33.4%, and atypical antipsychotics (30.1%. Side effects were reported in 5.3% of the total sample and the most common were insomnia (2.3%, nausea (2.3%, and dizziness (0.8%. No significant difference, in terms of tolerability, in mono- versus augmentative therapy groups was found. In addition, neither age nor gender was significantly correlated with a greater presence of side effects. Finally, no significant correlation between dosage and side effects was observed.Conclusion: Over a 14-month observation period, escitalopram, either as monotherapy or an augmentative treatment, was found to be well tolerated in a large sample of patients with affective disorders, with an overall low rate of side effects.Keywords: affective disorders, escitalopram

  11. Systemic cytokine and interferon responsiveness Patterns in HIV and HCV mono and co-infections.

    Science.gov (United States)

    Fernandez-Botran, Rafael; Joshi-Barve, Swati; Ghare, Smita; Barve, Shirish; Young, Mary; Plankey, Michael; Bordon, Jose

    2014-11-01

    The role of host response-related factors in the fast progression of liver disease in individuals co-infected with HIV and HCV viruses remains poorly understood. This study compared patterns of cytokines, caspase-1 activation, endotoxin exposure in plasma as well as interferon signaling in peripheral blood mononuclear cells from HIV/HCV co-infected (HIV(+)/HCV(+)), HCV mono-infected (HIV(-)/HCV(+)), HIV mono-infected (HIV(+)/HCV(-)) female patients and HIV- and HCV-uninfected women (HIV(-)/HCV(-)) who had enrolled in the Women's Interagency HIV Study (WIHS). HIV(+)/HCV(+) women had higher plasma levels of pro-inflammatory cytokines as well as caspase-1 compared with other groups. Both HIV(+)/HCV(+) and HIV(+)/HCV(-) women had significantly higher sCD14 levels compared with other groups. Peripheral blood mononuclear cells from HCV mono-infected patients had reduced levels of phosphorylation of STAT1 compared with other groups as well as lower basal levels of expression of the IFN-stimulated genes, OAS1, ISG15, and USP18 (UBP43). Basal expression of USP18, a functional antagonist of ISG15, as well as USP18/ISG15 ratios were increased in the HIV(+)/HCV(+) group compared with HIV(-)/HCV(+) and HIV(+)/HCV(-) groups. A more pronounced systemic inflammatory profile as well as increased expression ratios of USP18 to ISG15 may contribute to the more rapid progression of liver disease in HIV(+)/HCV(+) individuals. PMID:24955730

  12. Compartmentation of mono- and sesqui-terpene biosynthesis of the essential oil in poncirus trifoliata

    International Nuclear Information System (INIS)

    The fruit of Poncirus trifoliata shows glandular cells complexes in the exocarp, which produce a volatile oil rich in monoterpenes but poor in sesquiterpenes and oxigenated compounds. The juice vesicles of the endocarp possess similar cell complexes mainly containing sesquiterpenes and oxigenated compounds, whereas monoterpenes only occur in small amounts. By the use of combined gas chromatography-mass spectrometry 19 components of the rind oil and 15 compounds of the endocarp oil could be identified. As demonstrated by electron microscopy the terpenes most probably are synthesized predominantly, if not exclusively in plastids. As shown by gasradiochromatography radioactive precursors (14Co2 and 14C-leucine) are incorporated into mono- and sesqui-terpenes to a different extent. This is due to two gland types producing essential oils of different composition with regard to their mono- and sesqui-terpene percentage. In fruit development the exocarp glands differentiate earlier than the endocarp glands do. The activity of exogenously applied 14Co2 first reaches the peripheral glands and later on appears in the interior glands. Depending upon the growth season, labelled leucine transported by the conducting tissues from lower plant parts leads to a high specific activity of the sesqui-terpenes and oxigenated compounds. It could be argued that in this instance the glands of the pulp are better provided with precursors than the exocarp glands. The successive maxima of essential oil production in both glandular complexes, and the changes in the concentration of individual oil constituents during the ontogeny of the fruit also contribute to different incorporation ratios of radioactive precursors into mono- and sesqui-terpenes. (author)

  13. Upgrading of the Mono Media Filters in Water Treatment Plants by Changing Filter Media

    OpenAIRE

    L Rezaei; V Alipour

    2011-01-01

    "n "n "nBackground and Objectives:Dual media filters have two different layer beds consist of sand and Anthracite. Advantage of dual media filters is longer run duration and more filtration rate. The purpose of this study was to achieve a performable model to improve single media Filters in water treatment plants."nMaterials and Methods: in this cross-sectional study, two pilots; mono and dual media were made and in a 5 month period samples taking were done. Total samples taken from input and...

  14. New ruthenium nitrosyl pincer complexes bearing an O2 ligand. Mono-oxygen transfer.

    Science.gov (United States)

    Fogler, Eran; Efremenko, Irena; Gargir, Moti; Leitus, Gregory; Diskin-Posner, Yael; Ben-David, Yehoshoa; Martin, Jan M L; Milstein, David

    2015-03-01

    We report on Ru((II))(μ(2)-O2) nitrosyl pincer complexes that can return to their original Ru(0) state by reaction with mono-oxygen scavengers. Potential intermediates were calculated by density functional theory (DFT) and a mechanism is proposed, revealing a new type of metal-ligand cooperation consisting of activation of the O2 moiety by both the metal center and the NO ligand. Reaction of the Ru(0) nitrosyl complex 1 with O2 quantitatively yielded the crystallographically characterized Ru((II)) (μ(2)-O2) nitrosyl complex 2. Reaction of 2 with the mono-oxygen scavengers phosphines or CO gave the Ru(0) complex 1 and phosphine oxides, or the carbonyl complex 3 (1 trapped by CO) and CO2, respectively. Reaction of 2 with 1 equiv of phosphine at room temperature or -40 °C resulted in immediate formation of half an equivalent of 1 and 1 equiv of phosphine oxide, while half an equivalent of 2 remained unchanged. Overnight reaction at room temperature of 2 with excess CO (≥3 equiv) resulted in 3 and CO2 gas as the only products. Reaction of 1 with 1 equiv of mono-oxygen source (dioxirane) at -78 °C yielded the Ru((II))(μ(2)-O2) complex 2. Similarly, reaction of the Ru(0) dearomatized complex 4 with O2 led to the crystallographicaly characterized Ru((II))(μ(2)-O2) complex 5. Further reaction of 5 with mono-oxygen scavengers (phosphines or CO) led to the Ru(0) complex 4 and phosphine oxides or complex 6 (4 trapped by CO) and CO2. When instead only 1 equiv of 5 was reacted with 1 equiv of phosphine at room temperature, immediate formation of half an equivalent of 4 and 1 equiv of phosphine oxide took place, while half an equivalent of 5 remained unchanged. When 5 reacted with an excess of CO (≥3 equiv), complex 6 and CO2 gas were the only products obtained. DFT studies indicate a new mode of metal-ligand cooperation involving the nitrosyl ligand in the oxygen transfer process. PMID:25695626

  15. Efeito da mono-semi-carbazona do adrenocromo sobre o metabolismo de frangos de corte

    OpenAIRE

    Andriguetto, Jose Luciano

    2012-01-01

    Este estudo foi planejado com o objetivo de verificar o efeito da mono-semi-carbazona do adrenocromo (MSCA), um derivado estável do adrenocromo, sobre o metabolismo de frangos de corte, machos e fêmeas. A MSCA foi pouco pesquisada em termos de sua atividade sobre o organismo animal, inexistindo estudos da ação de substância em frangos de corte. Os efeitos da MSCA sobre o metabolismo de frangos de corte foram avaliados através da performance produtiva das aves e por acompanhamento da atividade...

  16. Direct measurement of super-paramagnetic fluctuations in mono-domain Fe particles

    Energy Technology Data Exchange (ETDEWEB)

    Casalta, H.; Schleger, P.; Ehlers, G.; Farago, B. [Institut Max von Laue - Paul Langevin (ILL), 38 - Grenoble (France); Bellouard, C. [Lab. Metal Physique, Nancy (France); Hennion, M.; Mirebeau, I. [Laboratoire Leon Brillouin (LLB) - Centre d`Etudes de Saclay, 91 - Gif-sur-Yvette (France); Dormann, J.L. [LMO, Versailles (France); Kelsch, M.; Linde, M.; Philip, F. [Max-Planck-Institut fuer Metallforschung, Stuttgart (Germany)

    1999-11-01

    By combining measurements on two spin-echo spectrometers IN15, we have measured the super-parametric relaxation of nano-scale, magnetic mono-domain iron particles over a very wide time range (0.01 to 160 nsec). Taking into account the effect of particle size distribution, we fit the line-shape of the intermediate scattering function and determine the temperature T and Q dependence of the longitudinal super-spin relaxation time. It is found that below 40 K, inter-particle correlations affect the longitudinal super-spin fluctuations. (authors) 6 refs., 2 figs.

  17. Direct measurement of super-paramagnetic fluctuations in mono-domain Fe particles

    International Nuclear Information System (INIS)

    By combining measurements on two spin-echo spectrometers IN15, we have measured the super-parametric relaxation of nano-scale, magnetic mono-domain iron particles over a very wide time range (0.01 to 160 nsec). Taking into account the effect of particle size distribution, we fit the line-shape of the intermediate scattering function and determine the temperature T and Q dependence of the longitudinal super-spin relaxation time. It is found that below 40 K, inter-particle correlations affect the longitudinal super-spin fluctuations. (authors)

  18. Effects of spin-orbit interaction on the electronic structure of mono-layer quantum wires

    Science.gov (United States)

    Vaseghi, B.; Ghaffari, A.

    2016-07-01

    Simultaneous effects of spin-orbit interaction, external electric and magnetic fields and dimension on the electronic structure of a mono-layer quantum wire are investigated in this paper. Due to the direct effects of external electric field on the structure's symmetries and spin-orbit interaction, energy eigenvalues and functions of the system are calculated with axial or in-plane electric field. It is shown that spin-orbit interaction modifies energy eigenvalues and functions of the system with regard to external factors.

  19. Effects of methotrexate on rat P-450 cytochrome mono-oxygenases

    International Nuclear Information System (INIS)

    Methotrexate, an anti-cancerous agent, acts as an anti-metabolite of the nucleic acids which synthesis is then inhibited. Using aminopyrine breath test after methotrexate processing, the effects of the molecule on activities of the hepatocyte P-450 cytochrome mono-oxygenases, are studied. Breath micro-tests with carbon 13-labelled aminopyrine have been carried out to observe the metabolism evolution. Micro-test results have been compared to microsomal enzymatic activities for various substrates, and also to P-450 cytochrome ratio. Results show that methotrexate induces a reduction in the P-450 cytochrome ratio, and thus reduce the hepatic biotransformation process. 1 fig., 30 refs

  20. Transient heating and evaporation of moving mono-component liquid fuel droplets

    DEFF Research Database (Denmark)

    Yin, Chungen

    2016-01-01

    This paper presents a complete description of a model for transient heating and evaporation of moving mono-component liquid fuel droplets. The model mainly consists of gas phase heat and mass transfer analysis, liquid phase analysis, and droplet dynamics analysis, which address the interaction...... experimental or modelling results of heating and evaporation of n-Heptane and n-Decane droplets in literature), so that the model can be readily and reliably extended to more generic applications (e.g., heating and evaporation of multi-component liquid fuel droplets, thermochemical conversion of commercially...

  1. Thorium Mono- and Bis(imido) Complexes Made by Reprotonation of cyclo-Metalated Amides

    OpenAIRE

    Bell, Nicola L.; Maron, Laurent; Arnold, Polly L

    2015-01-01

    Molecules containing actinide–nitrogen multiple bonds are of current interest as simple models for new actinide nitride nuclear fuels, and for their potential for the catalytic activation of inert hydrocarbon C–H bonds. Complexes with up to three uranium–nitrogen double bonds are now being widely studied, yet those with one thorium–nitrogen double bond are rare, and those with two are unknown. A new, simple mono(imido) thorium complex and the first bis(imido) thorium complex, K[Th(═NAr)N″3] a...

  2. Search for Dark Matter in Mono-Photon Events at 13 TeV with ATLAS

    CERN Document Server

    Ratti, Maria Giulia; The ATLAS collaboration

    2016-01-01

    A search for Dark Matter in events with an energetic photon and large missing transverse momentum with the ATLAS experiment is presented. The analysis is performed on the data collected from proton-proton collisions delivered by the LHC at a center-of-mass energy of 13 TeV, corresponding to an integrated luminosity of 3.2 fb−1. A solid estimation of the amount of mono-photon events that are due to Standard Model processes is the key ingredient for this search. The techniques developed at this aim are presented. Results are interpreted in terms of direct production of Dark Matter particles.

  3. Asociaciones palinológicas en las formaciones Los Monos (Devónico) e Itacua (Carbonífero Inferior) en Balapuca (Cuenca Tarija), sur de Bolivia: Parte 1. Formación Los Monos Palynological assemblages present in Los Monos (Devonian) and Itacua (Lower Carboniferous) formations at Balapuca (Tarija basin), southern Bolivia: Part One. Los Monos Formation

    OpenAIRE

    Mercedes di Pasquo

    2007-01-01

    Se caracterizan cuali-cuantitativamente dos asociaciones palinológicas recuperadas de ocho muestras fértiles de la Formación Los Monos (Eifeliano tardío-Frasniano temprano), expuesta en la localidad de Balapuca, ubicada en la margen boliviana del río Bermejo en la sierra de San Telmo. Esta unidad depositada en la Cuenca Tarija, sobreyace a la Formación Pescado (o Huamampampa, Emsiano-Eifeliano), y subyace, cuando está preservada, a la Formación Iquirí (Frasniano-Famenniano). La sección litoló...

  4. Leachable Li and Mg Evidence for Hydrological Changes in the Mono Basin, CA, USA

    Science.gov (United States)

    Sahajpal, R.; Hemming, N.; Zimmerman, S. R.; Hemming, S. R.

    2007-12-01

    Hydrology in closed basin lakes, such as Mono Lake of the US western Great Basin, is sensitive to regional climate changes. Lake level history of the Mono Basin has been put into a precise age framework using the paleomagnetic intensity of the Wilson Creek Formation sediments to North Atlantic records, and accordingly Greenland's GISP2 oxygen isotope record (Zimmerman et al., 2006, EPSL, v. 252, pp. 94- 106). This allows correlation of the lake level indicators and Greenland climate at high resolution. The physical evidence for lake level, based on the association of strata in near shore terraces, can be confidently correlated to proxies of lake chemistry preserved in the strata. We have tested the application of leachable Li, following the procedure developed by Bischoff et al. (1997, Quaternary Research, v. 48, pp. 313-325) for Owens Lake. At Owens Lake there is a positive correlation between salinity based on diatoms with leachable Li concentrations. In contrast, at Mono Lake the leachable Li concentration follows the bulk carbonate concentration, generally correlating low lake levels (high salinity) with low leachable Li concentrations. Our preferred explanation for both the carbonate and leachable Li concentrations is based on the fact that the Mono Basin rarely overflows, and therefore precipitation of minerals during evaporation leads to chemical divides (Garrels and Mackenzie., 1967, in "Equilibrium Concepts in Natural Water Systems", W. Stumm, Ed., pp. 222-242). As Li behaves conservatively compared to elements like Ca2+ and Mg2+, it might be expected that the leachable Li would be higher when lake level is lower. However, the host for the Li appears to be Mg-smectite. Therefore, the concentration of leachable Li in the sediment is controlled by the concentration of Mg-smectite, as well as the Li/Mg of the water from which the Mg- smectite precipitated and the Kd of the Li into the Mg-smectite. We are studying the Li and Mg systematics of these samples in

  5. High-resolution seismic imaging, Mono Lake fault zone, eastern Sierra region, Walker Lane, California

    Science.gov (United States)

    Jayko, A. S.; Childs, J. R.; Hart, P. E.; Bursik, M. I.; McClain, J. S.

    2012-12-01

    Multiple strands of the Mono Lake fault zone (MLfz), a segment of the Sierra Nevada frontal fault zone, have been imaged on several high-resolution seismic reflection profiles collected during 2009 and 2011 at Mono Lake. The profiles show coherent reflectors to about 30-40 ms depth below the lake bottom (~30 m thick section) in nearshore areas north of the Lee Vining delta. The MLfz is well imaged on 8 lines including 4 lines ~normal to the trend of the fault zone. The fault zone is ~ 0.75 km wide. Deep reflection horizons appear gently tilted and rotated into the fault zone with a prominent clastic wedge overlying the west-tilted horizons. Shallow reflectors above the clastic wedge are generally east-sloping, but noticeably less inclined above the fault zone. At least two ruptures offset Holocene deposits, with ~0.5-1.8 m dip-slip offset around 2.5 ka and ~3.6-6.13 m dip-slip offset around 4.7 to 6.25 ka. The ages of reflection horizons are estimated using published Holocene and late Pleistocene sedimentation rates, as well as correlation with a published nearby shallow core. The short term fault slip rate based on the timing of the most recent event and multiple events in the profile lines suggests fault slip rates of about 0.26 to 0.55 m/ka using ages based only on sedimentation rate and of about 0.31 to 0.34 m/ka using correlation ages from nearby shallow core. This offshore dip-slip rate is significantly lower than previous published 1.0-2.0 m/ka dip-slip rates estimated using cosmogenic dating of Tioga glacial moraines in Lundy Canyon and offset older moraines. The offset on the large scarp in Lundy Canyon (~20 m) decreases both north and south of the canyon and flanking lateral moraines where the scarp is on the order of only ~4-7 m high. A possible explanation for the apparent difference in MLfz slip rates onshore and offshore in this part of Mono Basin may be soft sediment deformation of saturated glacial-deltaic sediment within Lundy Canyon that causes

  6. Correlation of lacustrine paleoclimate records from Mono Lake with the North Atlantic using paleomagnetic intensity

    Science.gov (United States)

    Zimmerman, S. R. H.; Hemming, S. R.; Kent, D. V.

    2003-04-01

    The Wilson Creek Formation of Mono Lake, CA is a Late Pleistocene lacustrine sequence that records major shifts in the paleoenvironment of the lake. It has also been shown to be an excellent recorder of the past variations of the Earth’s magnetic field, and is important as the type section of the Mono Lake Excursion (MLE). As with many terrestrial records, however, it has proven to be very challenging to date the Wilson Creek Fm. at high resolution. Radiocarbon dating has been shown to be vulnerable to contamination with modern carbon, while 40Ar/39Ar dating of the rhyolitic ashes is complicated by inclusion of older xenocrysts. Benson et al. (1998; QR, v. 49, 1-10 ) suggested a correlation to North Atlantic records using paleomagnetic inclination and intensity combined with radiocarbon ages. They argued that δ18O of the Wilson Creek sediments represents variations in lake level, with prominent dry periods (high δ18O) correlating to the North Atlantic Heinrich events. We generated a relative paleointensity record for the Wilson Creek section and propose an alternative correlation to the North Atlantic Paleomagnetic Intensity Stack (NAPIS-75; Laj et al. 2000, Phil. Trans. R. Soc., v. 358, 1009-1025) and the GISP2 age model. It was recently demonstrated by Stoner et al. (2002, QSR v. 21, 1141-1151) that variations in the Earth’s paleomagnetic field intensity are correlative both at high-resolution (10^3 yr) and over long distances (10^4 km). Assuming that the MLE is equivalent to the Laschamp Excursion and that the lake expanded early in Marine Isotope Stage 4, a simple correlation of the major features of the NAPIS-75 and Mono records places the Wilson Creek Fm. on the GISP2 age model, and allows correlation of that paleoclimate record to other records also on that time scale. We also interpret the major δ18O excursions as Heinrich correlatives; however, our correlation equates the three older excursions to H4, H5, and H6 (rather than H3, no correl., and H4

  7. Geochemical fingerprinting of Wilson Creek Formation tephra layers (Mono Basin, CA) using titanomagnetite compositions

    Science.gov (United States)

    Marcaida, M.; Mangan, M.; Vazquez, J. A.; Bursik, M. I.

    2012-12-01

    The Wilson Creek Formation (WCF) near Mono Lake in eastern California is a 6-15 m thick sequence of lake sediments interbedded with 18 rhyolitic tephra layers attributed to eruptions from nearby Mono Craters, and 2 basaltic tephra layers erupted from Black Point and June Lake (not included in study). These tephra layers are numbered 1 to 19 (June Lake tephra designated as Ash 13*) from top to bottom (Lajoie, 1968), and range in age from ~14 to 67 ka (Zimmerman et al., 2006). The WCF tephras are important to understanding volcanism in the Long Valley region, and they provide age constraints for paleomagnetic, paleoclimatic, and paleoecologic studies. Major-oxide compositions of glass for the rhyolitic tephras are similar, with no reported compositional variations between layers. In this study, we show that titanomagnetite compositions can be used to fingerprint specific WCF tephra layers, thus enhancing their use as time-stratigraphic markers. We performed electron microprobe analyses of >700 titanomagnetite crystals and minor ilmenite. Compositional ranges of titanomagnetite are ~83-89 wt% FeO, and ~8-14 wt% TiO2, with MgO+MnO+Al2O3 12 wt%), although Ash 8 has the lowest FeO/TiO2 (~6). Titanomagnetite crystals in the other WCF tephra layers are not as compositionally distinct (FeO/TiO2 = ~7.5-8), although the youngest tephras (Ashes 1- 4) can be distinguished on the basis of MgO content. Ash 15 is unique and exhibits a bimodal population. The composition of Ash 18 titanomagnetites are completely off-trend, with MgO+MnO+Al2O3 ~6 wt% (a factor of 2 difference). Results show that (1) the WCF tephras are compositionally related, but some individual tephras can be distinguished using titanomagnetite compositions. The oldest WCF tephra (Ash 19) had an eruption temperature of ~715°C (Fe-Ti oxide geothermometry of Ghiorso and Evans, 2008), and the general trend of decreasing FeO/TiO2 suggests magmatic temperatures increased for successively erupted Mono Craters rhyolites

  8. Control and estimation algorithms for the stabilization of VTOL UAVS from mono-camera measurements.

    OpenAIRE

    De Plinval, H.; Eudes, A.; Morin, P.

    2014-01-01

    This paper concerns the control of Vertical Take-Off and Landing (VTOL) Unmanned Aerial Vehicles (UAVs) based on exteroceptive measurements obtained from a mono-camera vision system. By assuming the existence of a locally planar structure in the field of view of the UAV’s videocamera, the so-called homography matrix can be used to represent the vehicle’s motion between two views of the structure. In this paper we report recent results on both the problem of homography estimation from the fusi...

  9. Third order nonlinear optical response exhibited by mono- and few-layers of WS2

    Science.gov (United States)

    Torres-Torres, Carlos; Perea-López, Néstor; Elías, Ana Laura; Gutiérrez, Humberto R.; Cullen, David A.; Berkdemir, Ayse; López-Urías, Florentino; Terrones, Humberto; Terrones, Mauricio

    2016-06-01

    In this work, strong third order nonlinear optical properties exhibited by WS2 layers are presented. Optical Kerr effect was identified as the dominant physical mechanism responsible for these third order optical nonlinearities. An extraordinary nonlinear refractive index together with an important contribution of a saturated absorptive response was observed to depend on the atomic layer stacking. Comparative experiments performed in mono- and few-layer samples of WS2 revealed that this material is potentially capable of modulating nonlinear optical processes by selective near resonant induced birefringence. We envision applications for developing all-optical bidimensional nonlinear optical devices.

  10. Mixtures of mono-, di- and tri-glycerides as energy supplements to broilers’ diets

    OpenAIRE

    Sara Minieri; Clara Sargentini; Francesco Petacchi,; Mauro Antongiovanni; Arianna Buccioni

    2010-01-01

    Mixtures of mono-, di- and tri-glycerides from olive oil (MDT) were added to: palm oil (PO), olive oil (OO), soybean oil (SO), free fatty acids from palm oil (PFA), free fatty acids from olive oil (OFA). The compound mixtures were used as energy supplements in the diets of broiler chickens in comparison with plain SO and plain animal fat (AF). Two hundred and ten birds were randomly allotted to 7 dietary treatments with the diverse oil sources: 6 birds per cage, 5 cages per treatment. The eff...

  11. Electron impact single ionization of mono- and di-positive ions

    Indian Academy of Sciences (India)

    M Alfaz Uddin; A K F Haque; M S Mahbub; K R Karim; A K Basak

    2006-06-01

    The electron impact ionization cross-sections of mono- and di-positive ionic targets are calculated using a second version of the modified binary-encounter-dipole (MBED) model, previously reported [M A Uddin et al, J. Phys. B37, 1909 (2004)]. The present version differs from the previous one in the scale factor of the Burgess denominator and is applicable to targets with charges = 1 and 2. The MBED in the present form is found to work well for 11 ionic targets ranging from Be+ to K+ and complements its previous version valid for targets with > 2.

  12. Degradation of a mono sulfonated azo dye by an integrated bio sorption and anaerobic system

    International Nuclear Information System (INIS)

    A simulated textile effluent containing a mono sulphonated azo dye was fed to an anaerobic bioreactor in which a natural adsorbent, spent brewery grains (SBG), was incorporated. SABG is a by-product of the brewing industry and could act as adsorbent as well an electron shuttle (lignin fraction) in the dye degradation mechanism. Furthermore, it can also work as a conditioner for the anaerobic biomass. The influence of the dye (Acid Orange 7, AO7) concentration (60 and 150 mg/L) and the presence of SBG in the performance of upflow anaerobic sludge blanket reactor (UASB) was evaluated. (Author)

  13. Rheology Of MonoSodium Titanate (MST) And Modified Mst (mMST) Mixtures Relevant To The Salt Waste Processing Facility

    Energy Technology Data Exchange (ETDEWEB)

    Koopman, D. C.; Martino, C. J.; Shehee, T. C.; Poirier, M. R.

    2013-07-31

    The Savannah River National Laboratory performed measurements of the rheology of suspensions and settled layers of treated material applicable to the Savannah River Site Salt Waste Processing Facility. Suspended solids mixtures included monosodium titanate (MST) or modified MST (mMST) at various solid concentrations and soluble ion concentrations with and without the inclusion of kaolin clay or simulated sludge. Layers of settled solids were MST/sludge or mMST/sludge mixtures, either with or without sorbed strontium, over a range of initial solids concentrations, soluble ion concentrations, and settling times.

  14. Biomedically relevant chemical and physical properties of coal combustion products.

    OpenAIRE

    Fisher, G L

    1983-01-01

    The evaluation of the potential public and occupational health hazards of developing and existing combustion processes requires a detailed understanding of the physical and chemical properties of effluents available for human and environmental exposures. These processes produce complex mixtures of gases and aerosols which may interact synergistically or antagonistically with biological systems. Because of the physicochemical complexity of the effluents, the biomedically relevant properties of...

  15. Relevance of nutrient media composition for hydrogen production in Chlamydomonas.

    Science.gov (United States)

    Gonzalez-Ballester, David; Jurado-Oller, Jose Luis; Fernandez, Emilio

    2015-09-01

    Microalgae are capable of biological H2 photoproduction from water, solar energy, and a variety of organic substrates. Acclimation responses to different nutrient regimes finely control photosynthetic activity and can influence H2 production. Hence, nutrient stresses are an interesting scenario to study H2 production in photosynthetic organisms. In this review, we mainly focus on the H2-production mechanisms in Chlamydomonas reinhardtii and the physiological relevance of the nutrient media composition when producing H2. PMID:25952745

  16. Literature relevant to remote sensing of water quality

    Science.gov (United States)

    Middleton, E. M.; Marcell, R. F.

    1983-01-01

    References relevant to remote sensing of water quality were compiled, organized, and cross-referenced. The following general categories were included: (1) optical properties and measurement of water characteristics; (2) interpretation of water characteristics by remote sensing, including color, transparency, suspended or dissolved inorganic matter, biological materials, and temperature; (3) application of remote sensing for water quality monitoring; (4) application of remote sensing according to water body type; and (5) manipulation, processing and interpretation of remote sensing digital water data.

  17. Industrial systems biology and its impact on synthetic biology of yeast cell factories

    DEFF Research Database (Denmark)

    Fletcher, Eugene; Krivoruchko, Anastasia; Nielsen, Jens

    2016-01-01

    Engineering industrial cell factories to effectively yield a desired product while dealing with industrially relevant stresses is usually the most challenging step in the development of industrial production of chemicals using microbial fermentation processes. Using synthetic biology tools, micro...

  18. Marine Biology

    Science.gov (United States)

    Dewees, Christopher M.; Hooper, Jon K.

    1976-01-01

    A variety of informational material for a course in marine biology or oceanology at the secondary level is presented. Among the topics discussed are: food webs and pyramids, planktonic blooms, marine life, plankton nets, food chains, phytoplankton, zooplankton, larval plankton and filter feeders. (BT)

  19. Biology Notes.

    Science.gov (United States)

    School Science Review, 1983

    1983-01-01

    Describes laboratory procedures, demonstrations, and classroom activities/materials, including water relation exercise on auxin-treated artichoke tuber tissue; aerobic respiration in yeast; an improved potometer; use of mobiles in biological classification, and experiments on powdery mildews and banana polyphenol oxidase. Includes reading lists…

  20. The self-relevance system?

    Science.gov (United States)

    Conway, Martin A; Pothos, Emmanuel M; Turk, David J

    2016-01-01

    We suggest that the Self Attention Network (SAN) maybe part of a larger self-regulatory system, which we term the Self-Relevance System (SRS) of which the "core" or default network is a major part. It is within the core network that memories are generated and the future imagined. Such memories and imaginings are the basis of preoccupations. Within the SRS then preoccupations drive the emergence of attentional biases (ABs). ABs in turn are modulated by the SAN activating and inhibiting circuits that shape behavior. We consider briefly how this might function in dysfunctional appetitive behaviors, e.g., substance abuse. PMID:26305290

  1. Ecological principles relevant to nuclear war

    International Nuclear Information System (INIS)

    The ecological principles outlined are very basic ones; the authors anticipate a readership trained in a broad range of disciplines, including those unfamiliar with the academic discipline of ecology. The authors include substantial discussion on ecophysiology (i.e., the responses of organisms to their environment) because this is relevant to the new understanding of the potential climatic consequences of nuclear war. In particular, the physiological sensitivity of organisms to reduced levels of light and temperature are a key part of the analysis of the potential ecological effects and agricultural effects of nuclear war. Much of the ecological analysis has been organized around major biological units called biomes. The authors describe the biome concept and discuss some of the environmental-climatic factors that are believed to control biome distribution. Emphasis is given to plants because of their controlling influence on ecosystem functions through their role as primary producers. Future reports are needed to address more fully the potential effects on animals. Much more research needs to be done on both plant and animal responses to the types of perturbations possible for the aftermath of a nuclear war. Another important element for analysis of the potential ecological consequences of nuclear war concerns recovery processes. As the post-nuclear war environmental extremes ameliorate, ecological communities in devastated regions would begin to reorganize. It is not possible to predict the course of such a succession precisely, but some principles concerning post-perturbation replacement (such as seed banks and germination), relevant successional patterns, and organism strategies are discussed

  2. Biochemical Properties of a New Cold-Active Mono- and Diacylglycerol Lipase from Marine Member Janibacter sp. Strain HTCC2649

    Directory of Open Access Journals (Sweden)

    Dongjuan Yuan

    2014-06-01

    Full Text Available Mono- and di-acylglycerol lipase has been applied to industrial usage in oil modification for its special substrate selectivity. Until now, the reported mono- and di-acylglycerol lipases from microorganism are limited, and there is no report on the mono- and di-acylglycerol lipase from bacteria. A predicted lipase (named MAJ1 from marine Janibacter sp. strain HTCC2649 was purified and biochemical characterized. MAJ1 was clustered in the family I.7 of esterase/lipase. The optimum activity of the purified MAJ1 occurred at pH 7.0 and 30 °C. The enzyme retained 50% of the optimum activity at 5 °C, indicating that MAJ1 is a cold-active lipase. The enzyme activity was stable in the presence of various metal ions, and inhibited in EDTA. MAJ1 was resistant to detergents. MAJ1 preferentially hydrolyzed mono- and di-acylglycerols, but did not show activity to triacylglycerols of camellia oil substrates. Further, MAJ1 is low homologous to that of the reported fungal diacylglycerol lipases, including Malassezia globosa lipase 1 (SMG1, Penicillium camembertii lipase U-150 (PCL, and Aspergillus oryzae lipase (AOL. Thus, we identified a novel cold-active bacterial lipase with a sn-1/3 preference towards mono- and di-acylglycerides for the first time. Moreover, it has the potential, in oil modification, for special substrate selectivity.

  3. Biochemical properties of a new cold-active mono- and diacylglycerol lipase from marine member Janibacter sp. strain HTCC2649.

    Science.gov (United States)

    Yuan, Dongjuan; Lan, Dongming; Xin, Ruipu; Yang, Bo; Wang, Yonghua

    2014-01-01

    Mono- and di-acylglycerol lipase has been applied to industrial usage in oil modification for its special substrate selectivity. Until now, the reported mono- and di-acylglycerol lipases from microorganism are limited, and there is no report on the mono- and di-acylglycerol lipase from bacteria. A predicted lipase (named MAJ1) from marine Janibacter sp. strain HTCC2649 was purified and biochemical characterized. MAJ1 was clustered in the family I.7 of esterase/lipase. The optimum activity of the purified MAJ1 occurred at pH 7.0 and 30 °C. The enzyme retained 50% of the optimum activity at 5 °C, indicating that MAJ1 is a cold-active lipase. The enzyme activity was stable in the presence of various metal ions, and inhibited in EDTA. MAJ1 was resistant to detergents. MAJ1 preferentially hydrolyzed mono- and di-acylglycerols, but did not show activity to triacylglycerols of camellia oil substrates. Further, MAJ1 is low homologous to that of the reported fungal diacylglycerol lipases, including Malassezia globosa lipase 1 (SMG1), Penicillium camembertii lipase U-150 (PCL), and Aspergillus oryzae lipase (AOL). Thus, we identified a novel cold-active bacterial lipase with a sn-1/3 preference towards mono- and di-acylglycerides for the first time. Moreover, it has the potential, in oil modification, for special substrate selectivity. PMID:24927145

  4. [Study on biodegradation of 2,4-DCP by anaerobic sludge acclimated by mixed mono-chlorphenols].

    Science.gov (United States)

    Zhang, Wen; Chen, Ling; Ji, Jun-Ping; Xia, Si-Qing

    2007-06-01

    Purpose of this study was to determine the treatability of 2,4-dichlorophenol (2,4-DCP) by anaerobic granular sludge which was acclimated by mixed mono-chlorphenols (2-CP, 4-MCP). The characteristic of degradation of 2,4-DCP by anaerobic sludge acclimated by mixed mono-chlorphenols was investigated through shake flask study and performance of continuous flow anaerobic bioreactors. The difference of degradation of 2,4-DCP by acclimated and unacclimated sludge was also compared. 2,4-DCP was degraded at 50 h and 180 h respectively for acclimated and unacclimated sludge, which testified that acclimated sludge could more effectively degrade 2,4-DCP. Although the intermediate product 4-MCP was present in both reaction system, 4-MCP could be degraded completely after 400 h in the acclimated sludge but accumulated in the unacclimated sludge. Therefore, acclimation by the mixed mono-chlorphenols (2-CP, 4-MCP) could enhance the ability of para- and meta-dechlorination for anaerobic sludge and increase the treatability of 2,4-DCP. The results of continuous anaerobic sludge-suspended carrier bioreactor (ASSCB) indicate that inoculation of the acclimated sludge by mixed mono-chlorphenols can degrade two mono-chlorphenols simultaneously, shorten the setup period, and increase the efficiency of degrading 2,4-DCP. 2-CP was easily degraded with removal rate of over 80% . While the removal rate of 4-MCP was fluctuating within 30% - 80% with changes of its influent concentration. PMID:17674731

  5. Biological trade and markets.

    Science.gov (United States)

    Hammerstein, Peter; Noë, Ronald

    2016-02-01

    Cooperation between organisms can often be understood, like trade between merchants, as a mutually beneficial exchange of services, resources or other 'commodities'. Mutual benefits alone, however, are not sufficient to explain the evolution of trade-based cooperation. First, organisms may reject a particular trade if another partner offers a better deal. Second, while human trade often entails binding contracts, non-human trade requires unwritten 'terms of contract' that 'self-stabilize' trade and prevent cheating even if all traders strive to maximize fitness. Whenever trading partners can be chosen, market-like situations arise in nature that biologists studying cooperation need to account for. The mere possibility of exerting partner choice stabilizes many forms of otherwise cheatable trade, induces competition, facilitates the evolution of specialization and often leads to intricate forms of cooperation. We discuss selected examples to illustrate these general points and review basic conceptual approaches that are important in the theory of biological trade and markets. Comparing these approaches with theory in economics, it turns out that conventional models-often called 'Walrasian' markets-are of limited relevance to biology. In contrast, early approaches to trade and markets, as found in the works of Ricardo and Cournot, contain elements of thought that have inspired useful models in biology. For example, the concept of comparative advantage has biological applications in trade, signalling and ecological competition. We also see convergence between post-Walrasian economics and biological markets. For example, both economists and biologists are studying 'principal-agent' problems with principals offering jobs to agents without being sure that the agents will do a proper job. Finally, we show that mating markets have many peculiarities not shared with conventional economic markets. Ideas from economics are useful for biologists studying cooperation but need

  6. Biological trade and markets

    Science.gov (United States)

    2016-01-01

    Cooperation between organisms can often be understood, like trade between merchants, as a mutually beneficial exchange of services, resources or other ‘commodities’. Mutual benefits alone, however, are not sufficient to explain the evolution of trade-based cooperation. First, organisms may reject a particular trade if another partner offers a better deal. Second, while human trade often entails binding contracts, non-human trade requires unwritten ‘terms of contract’ that ‘self-stabilize’ trade and prevent cheating even if all traders strive to maximize fitness. Whenever trading partners can be chosen, market-like situations arise in nature that biologists studying cooperation need to account for. The mere possibility of exerting partner choice stabilizes many forms of otherwise cheatable trade, induces competition, facilitates the evolution of specialization and often leads to intricate forms of cooperation. We discuss selected examples to illustrate these general points and review basic conceptual approaches that are important in the theory of biological trade and markets. Comparing these approaches with theory in economics, it turns out that conventional models—often called ‘Walrasian’ markets—are of limited relevance to biology. In contrast, early approaches to trade and markets, as found in the works of Ricardo and Cournot, contain elements of thought that have inspired useful models in biology. For example, the concept of comparative advantage has biological applications in trade, signalling and ecological competition. We also see convergence between post-Walrasian economics and biological markets. For example, both economists and biologists are studying ‘principal–agent’ problems with principals offering jobs to agents without being sure that the agents will do a proper job. Finally, we show that mating markets have many peculiarities not shared with conventional economic markets. Ideas from economics are useful for biologists

  7. Interactive Effects of Working Memory Self-Regulatory Ability and Relevance Instructions on Text Processing

    Science.gov (United States)

    Hamilton, Nancy Jo

    2012-01-01

    Reading is a process that requires the enactment of many cognitive processes. Each of these processes uses a certain amount of working memory resources, which are severely constrained by biology. More efficiency in the function of working memory may mediate the biological limits of same. Reading relevancy instructions may be one such method to…

  8. Hematological toxicity of Zevalin1-90Y used in mono-therapy or in consolidation among 39 patients suffering of B non Hodgkin lymphomas (B-N.H.L.)

    International Nuclear Information System (INIS)

    Purpose: an important heterogeneity of hematological toxicity of Zevalin -90Y was observed in patients treated in mono-therapy or consolidation. In a context of ambulatory follow-up, it seems interesting to look for predicting this toxicity according to the clinico biological characteristics of patients. This would allow to select and follow in an optimum way the candidates to this treatment. A bi-centric retrospective study was lead for which objective was to enlighten the factors associated to this toxicity. Conclusions: a comprehensive study of clinico biological history and compliance with warnings of product characteristics summary will allow to select at the best the candidates to radioimmunotherapy by Zevalin-90Y. this treatment represents an interesting option in some patients (particularly aged patients), stays efficient and well tolerated. (N.C.)

  9. Ash production and dispersal from sustained low-intensity Mono-Inyo eruptions

    Science.gov (United States)

    Black, Benjamin A.; Manga, Michael; Andrews, Benjamin

    2016-08-01

    Recent rhyolitic volcanism has demonstrated that prolonged low-intensity ash venting may accompany effusive dome formation. We examine the possibility and some consequences of episodes of extended, weak ash venting at the rhyolitic Mono-Inyo chain in Eastern California. We describe ash-filled cracks within one of the youngest domes, Panum Crater, which provide a textural record of ash venting during dome effusion. We use synchrotron-based X-ray computed tomography to characterize the particles in these tuffisites. Particle sizes in well-sorted tuffisite layers agree well with grain size distributions observed during weak ash venting at Soufrière Hills Volcano, Montserrat, and yield approximate upper and lower bounds on gas velocity and mass flux during the formation of those layers. We simulate ash dispersal with Ash3d to assess the consequences of long-lived Mono-Inyo ash venting for ash deposition and the accompanying volcanic hazards. Our results highlight the sensitivity of large-scale outcomes of volcanic eruptions to small-scale processes.

  10. Dissecting simulated disk galaxies I: the structure of mono-age populations

    CERN Document Server

    Martig, Marie; Flynn, Chris

    2014-01-01

    We study seven simulated disk galaxies, three with a quiescent merger history, and four with mergers in their last 9 Gyr of evolution. We compare their structure at z=0 by decomposing them into "mono-age populations" (MAPs) of stars within 500 Myr age bins. All studied galaxies undergo a phase of merging activity at high redshift, so that stars older than 9 Gyr are found in a centrally concentrated component, while younger stars are mostly found in disks. We find that most MAPs have simple exponential radial and vertical density profiles, with a scale-height that typically increases with age. Because a large range of merger histories can create populations with simple structures, this suggests that the simplicity of the structure of mono-abundance populations observed in the Milky Way by Bovy et al. (2012b,c) is not necessarily a direct indicator of a quiescent history for the Milky Way. Similarly, the anti-correlation between scale-length and scale-height does not necessarily imply a merger-free history. How...

  11. Mono-dispersed cross-linked polystyrene micro-spheres prepared by seed swelling polymerization method

    Institute of Scientific and Technical Information of China (English)

    Dongsha WANG; Yanjun LIU

    2008-01-01

    A two-step swelling procedure was adopted to synthesize mono-dispersed and highly cross-linked poly (St-divinylbenzene) particles with PSt micro-spheres (1.80 μmin diameter). The PSt micro-spheres were prepared by a dispersion polymerization method and used as seeds. The effects of monomer concentration, ratio of ethanol to water, swelling reagents, crosslinking reagents, swelling temper-ature and agitation speed on particle size were investigated in detail. The morphologies and size distributions of these micro-spheres were examined by SEM and particle size analysis (PSA). The Tg of the micro-spheres was measured by DSC. The results indicate that the particles (6.20 μm in diameter) exhibit excellent mono dispersed property and high crosslinking degree when the concentration of the swelling reagent was 25%, the concentration of the cross-linking reagents was 23%, the swelling temperature was 30℃ and the stirring speed was 150 r/min.

  12. Facile Synthesis of Mono-Dispersed Polystyrene (PS/Ag Composite Microspheres via Modified Chemical Reduction

    Directory of Open Access Journals (Sweden)

    Wen Zhu

    2013-12-01

    Full Text Available A modified method based on in situ chemical reduction was developed to prepare mono-dispersed polystyrene/silver (PS/Ag composite microspheres. In this approach; mono-dispersed PS microspheres were synthesized through dispersion polymerization using poly-vinylpyrrolidone (PVP as a dispersant at first. Then, poly-dopamine (PDA was fabricated to functionally modify the surfaces of PS microspheres. With the addition of [Ag(NH32]+ to the PS dispersion, [Ag(NH32]+ complex ions were absorbed and reduced to silver nanoparticles on the surfaces of PS-PDA microspheres to form PS/Ag composite microspheres. PVP acted both as a solvent of the metallic precursor and as a reducing agent. PDA also acted both as a chemical protocol to immobilize the silver nanoparticles at the PS surface and as a reducing agent. Therefore, no additional reducing agents were needed. The resulting composite microspheres were characterized by TEM, field emission scanning electron microscopy (FESEM, energy-dispersive X-ray spectroscopy (EDS, XRD, UV-Vis and surface-enhanced Raman spectroscopy (SERS. The results showed that Ag nanoparticles (NPs were homogeneously immobilized onto the PS microspheres’ surface in the presence of PDA and PVP. PS/Ag composite microspheres were well formed with a uniform and compact shell layer and were adjustable in terms of their optical property.

  13. Potassium-argon ages of recent rhyolites of the Mono and Inyo craters, California

    Science.gov (United States)

    Brent, Dalrymple G.

    1967-01-01

    Twenty-two KAr ages were determined for sanidine samples from 10 rhyolite domes of the Mono and Inyo Craters to test the applicability of KAr dating to volcanic rocks of Recent age. Comparison of the results with 'blank' and dosed analyses shows that radiogenic 40Ar was detected and was measured to within a factor of two or better. The estimated standard deviation of precision is 12% for analyses containing 5% or more radiogenic 40Ar. A statistical analysis suggests that real differences in apparent age were detected between three of the analyzed domes. The ages, which range from 6400 to 10,200 years for experiments with 5% or more radiogenic 40Ar, are, in general, consistent with ionium ages on 5 of the same samples and with glacial and 14C evidence of age. They suggest that most of the Mono Craters volcanos are on the order of 10,000 years old or less. The results also suggest that the problem of excess 40Ar may not be severe for KAr dating of volcanic rocks. ?? 1967.

  14. Wetting of mono- and polycrystalline tungsten with Ni-Fe-W alloys

    Energy Technology Data Exchange (ETDEWEB)

    Yupko, V.L.; Monastyreva, N.I.; Verkhovodov, P.A.; Minakova, R.V.; Lotsko, D.V.; Nedolyaeva, L.P.; Vojtenko, V.L. (AN Ukrainskoj SSR, Kiev. Inst. Problem Materialovedeniya)

    1984-09-01

    Wetting mono- and polycrystalline tungsten on (111) and (110) faces with Ni-Fe-W alloys is studied in vacuum of 5-10 MPa and hydrogen atmosphere (P/sub H2/) approximately 19 rPa) in the 1760-1920 K range of temperatures during combined and separate heating of substrate and liquid phase. Surface tension and alloy density are measured within 1720-1890 K in helium atmosphere under pressure of 4 MPa. It is shown that difference in wetting of mono- and polycrystalline tungsten on (110) and (111) faces during separate heating in vacuum (1760 K) is in the limits of the experiment error: finite values of Ni-Fe-W alloy contact angles are equal to 1-3 deg independent of composition. Rates of coating of different types of tungsten with alloys of the composition given are also similar and fall with an increase of its content in a liquid phase. It is found that q=1-3 deg during polycrystalline tungsten wetting in the hydrogen atmosphere (1760 K) as well as in vacuum, however coating rates of all alloys are higher. Experiments on joint heating at temperatures 1760, 1820, 1870, 1920 K also confirm identity of wetting of monocrystalline tungsten of (111) and (110) faces and polycrystalline tungsten at all temperatures on all types of substrates q=1-3 deg.

  15. Mono-top Signature from Supersymmetric $t \\bar t H$ Channel

    CERN Document Server

    Gonçalves, Dorival; Takeuchi, Michihisa

    2016-01-01

    We point out that a distinctive mono-top signature is present in Natural SUSY scenarios when a scalar top-quark and higgsinos are almost mass degenerate. This signature originates from a supersymmetric counter part of the $t \\bar t H$ process, i.e. $pp \\to \\tilde t t \\tilde h$. Unlike mono-jet signatures exploiting initial state radiation, this channel can be regarded as a smoking gun signature of a light stop and higgsinos, allowing a direct probe of the stop and neutralino sectors. The production rate of this channel largely depends on the up-type higgsino components in the neutralinos while the stop sector is sensitive to angular distributions of top-quark's decay products. We develop an optimal search strategy to capture the supersymmetric $t \\bar t H$ process and find that a high luminosity LHC can probe the stop and higgsino sectors with $m_{\\tilde t_1} \\lesssim 380$ GeV and $m_{\\tilde t_1} - m_{\\tilde \\chi_1^0} \\lesssim m_W$. Additionally, we propose a kinematic variable with which one can measure the ...

  16. Enhanced cooling in mono-crystalline ultra-thin silicon by embedded micro-air channels

    Directory of Open Access Journals (Sweden)

    Mohamed T. Ghoneim

    2015-12-01

    Full Text Available In today’s digital world, complementary metal oxide semiconductor (CMOS technology enabled scaling of bulk mono-crystalline silicon (100 based electronics has resulted in their higher performance but with increased dynamic and off-state power consumption. Such trade-off has caused excessive heat generation which eventually drains the charge of battery in portable devices. The traditional solution utilizing off-chip fans and heat sinks used for heat management make the whole system bulky and less mobile. Here we show, an enhanced cooling phenomenon in ultra-thin (>10 μm mono-crystalline (100 silicon (detached from bulk substrate by utilizing deterministic pattern of porous network of vertical “through silicon” micro-air channels that offer remarkable heat and weight management for ultra-mobile electronics, in a cost effective way with 20× reduction in substrate weight and a 12% lower maximum temperature at sustained loads. We also show the effectiveness of this event in functional MOS field effect transistors (MOSFETs with high-κ/metal gate stacks.

  17. Enhanced cooling in mono-crystalline ultra-thin silicon by embedded micro-air channels

    Science.gov (United States)

    Ghoneim, Mohamed T.; Fahad, Hossain M.; Hussain, Aftab M.; Rojas, Jhonathan P.; Torres Sevilla, Galo A.; Alfaraj, Nasir; Lizardo, Ernesto B.; Hussain, Muhammad M.

    2015-12-01

    In today's digital world, complementary metal oxide semiconductor (CMOS) technology enabled scaling of bulk mono-crystalline silicon (100) based electronics has resulted in their higher performance but with increased dynamic and off-state power consumption. Such trade-off has caused excessive heat generation which eventually drains the charge of battery in portable devices. The traditional solution utilizing off-chip fans and heat sinks used for heat management make the whole system bulky and less mobile. Here we show, an enhanced cooling phenomenon in ultra-thin (>10 μm) mono-crystalline (100) silicon (detached from bulk substrate) by utilizing deterministic pattern of porous network of vertical "through silicon" micro-air channels that offer remarkable heat and weight management for ultra-mobile electronics, in a cost effective way with 20× reduction in substrate weight and a 12% lower maximum temperature at sustained loads. We also show the effectiveness of this event in functional MOS field effect transistors (MOSFETs) with high-κ/metal gate stacks.

  18. Synthesis and pharmacological evaluation of mono-arylimidamides as antileishmanial agents

    Science.gov (United States)

    Zhu, Xiaohua; Farahat, Abdelbasset A.; Mattamana, Meena; Joice, April; Pandharkar, Trupti; Holt, Elizabeth; Banerjee, Moloy; Gragg, Jamie L.; Hu, Laixing; Kumar, Arvind; Yang, Sihyung; Wang, Michael Zhuo; Boykin, David W.; Werbovetz, Karl A.

    2016-01-01

    Arylimidamide (AIA) compounds containing two pyridylimidamide terminal groups (bis-AIAs) possess outstanding in vitro antileishmanial activity, and the frontrunner bis-AIA DB766 (2,5-bis[2-(2-isopropoxy)-4-(2-pyridylimino)aminophenyl]furan) is active in visceral leishmaniasis models when given orally. Eighteen compounds containing a single pyridylimidamide terminal group (mono-AIAs) were synthesized and evaluated for their antileishmanial potential. Six of these compounds exhibited sub-micromolar potency against both intracellular Leishmania donovani and Leishmania amazonensis amastigotes, and three of these compounds also displayed selectivity indexes of 25 or greater for the parasites compared to a J774 macrophage cell line. When given orally at a dose of 100 mg/kg/day for five days, compound 1b (N-(3-isopropoxy-4-(5-phenylfuran-2-yl)phenyl)picolinimidamide methanesulfonate) reduced liver parasitemia by 46% in L. donovani-infected mice. Mono-AIAs are thus a new class of candidate molecules for antileishmanial drug development. PMID:27048943

  19. Propellant Grade Hydrazine in Mono/Bi-propellant Thrusters: Preparation and Performance Evaluation

    Directory of Open Access Journals (Sweden)

    S. Krishnamachary

    2015-03-01

    Full Text Available Propellant grade hydrazine was prepared with 64 per cent yield and 95.5 per cent purity. Purity of the propellant grade hydrazine was determined using wet chemical, gas chromatographic (GC and eudiometric methods. It was observed that the compositions containing blends of hydrazine-methyl alcohol-ammonium nitrate and hydrazine-methyl alcohol-ammonium perchlorate were not found to be frozen even after cooling to -65 °C for 30 minutes. Mono and bi-propellant thrusters were designed and developed to demonstrate the performance of prepared propellant grade hydrazine as a promising rocket fuel. Five static tests with 22 N thruster and one static test with 1 N thruster were performed successfully in mono-propellant mode. The hurdles of chamber pressure oscillations were overcome by compact packing of the catalyst. The desired decomposition and chamber pressure were achieved. One static test was performed successfully with 60 N bi-propellant thruster. The desired chamber pressure and thrust were achieved. The combustion was smooth and C* achieved was higher than that of UH-25, N2O4 combination. The performance of prepared propellant grade hydrazine shows it as a promising rocket fuels.Defence Science Journal, Vol. 65, No. 1, January 2015, pp.31-38, DOI:http://dx.doi.org/10.14429/dsj.65.7986

  20. Evaluation of mono or mixed cultures of lactic acid bacteria in type II sourdough system.

    Science.gov (United States)

    Ekinci, Raci; Şimşek, Ömer; Küçükçuban, Ayca; Nas, Sebahattin

    2016-04-01

    The aim of this study was to evaluate the use of mono and mixed lactic acid bacteria (LAB) cultures to determine suitable LAB combinations for a type II sourdough system. In this context, previously isolated sourdough LAB strains with antimicrobial activity, which included Lactobacillus plantarum PFC22, Lactobacillus brevis PFC31, Pediococcus acidilactici PFC38, and Lactobacillus sanfranciscensis PFC80, were used as mono or mixed culture combinations in a fermentation system to produce type II sourdough, and subsequently in bread dough production. Compared to the monoculture fermentation of dough, the use of mixed cultures shortened the adaptation period by half. In addition, the use of mixed cultures ensured higher microbial viability, and enhanced the fruity flavor during bread dough production. It was determined that the combination of L. plantarum PFC22 + P. acidilactici PFC38 + L. sanfranciscensis PFC80 is a promising culture mixture that can be used in the production of type II sourdough systems, and that may also contribute to an increase in metabolic activity during bread production process. PMID:25807196

  1. Enhanced cooling in mono-crystalline ultra-thin silicon by embedded micro-air channels

    KAUST Repository

    Ghoneim, Mohamed T.

    2015-12-11

    In today’s digital world, complementary metal oxide semiconductor (CMOS) technology enabled scaling of bulk mono-crystalline silicon (100) based electronics has resulted in their higher performance but with increased dynamic and off-state power consumption. Such trade-off has caused excessive heat generation which eventually drains the charge of battery in portable devices. The traditional solution utilizing off-chip fans and heat sinks used for heat management make the whole system bulky and less mobile. Here we show, an enhanced cooling phenomenon in ultra-thin (>10 μm) mono-crystalline (100) silicon (detached from bulk substrate) by utilizing deterministic pattern of porous network of vertical “through silicon” micro-air channels that offer remarkable heat and weight management for ultra-mobile electronics, in a cost effective way with 20× reduction in substrate weight and a 12% lower maximum temperature at sustained loads. We also show the effectiveness of this event in functional MOS field effect transistors (MOSFETs) with high-κ/metal gate stacks.

  2. Interaction of dermatologically relevant nanoparticles with skin cells and skin

    Science.gov (United States)

    Rancan, Fiorenza; Ahlberg, Sebastian; Nazemi, Berouz; Choe, Chun Sik; Darvin, Maxim E; Hadam, Sabrina; Blume-Peytavi, Ulrike; Loza, Kateryna; Diendorf, Jörg; Epple, Matthias; Graf, Christina; Rühl, Eckart; Meinke, Martina C; Lademann, Jürgen

    2014-01-01

    Summary The investigation of nanoparticle interactions with tissues is complex. High levels of standardization, ideally testing of different material types in the same biological model, and combinations of sensitive imaging and detection methods are required. Here, we present our studies on nanoparticle interactions with skin, skin cells, and biological media. Silica, titanium dioxide and silver particles were chosen as representative examples for different types of skin exposure to nanomaterials, e.g., unintended environmental exposure (silica) versus intended exposure through application of sunscreen (titanium dioxide) or antiseptics (silver). Because each particle type exhibits specific physicochemical properties, we were able to apply different combinations of methods to examine skin penetration and cellular uptake, including optical microscopy, electron microscopy, X-ray microscopy on cells and tissue sections, flow cytometry of isolated skin cells as well as Raman microscopy on whole tissue blocks. In order to assess the biological relevance of such findings, cell viability and free radical production were monitored on cells and in whole tissue samples. The combination of technologies and the joint discussion of results enabled us to look at nanoparticle–skin interactions and the biological relevance of our findings from different angles. PMID:25551064

  3. Interaction of dermatologically relevant nanoparticles with skin cells and skin

    Directory of Open Access Journals (Sweden)

    Annika Vogt

    2014-12-01

    Full Text Available The investigation of nanoparticle interactions with tissues is complex. High levels of standardization, ideally testing of different material types in the same biological model, and combinations of sensitive imaging and detection methods are required. Here, we present our studies on nanoparticle interactions with skin, skin cells, and biological media. Silica, titanium dioxide and silver particles were chosen as representative examples for different types of skin exposure to nanomaterials, e.g., unintended environmental exposure (silica versus intended exposure through application of sunscreen (titanium dioxide or antiseptics (silver. Because each particle type exhibits specific physicochemical properties, we were able to apply different combinations of methods to examine skin penetration and cellular uptake, including optical microscopy, electron microscopy, X-ray microscopy on cells and tissue sections, flow cytometry of isolated skin cells as well as Raman microscopy on whole tissue blocks. In order to assess the biological relevance of such findings, cell viability and free radical production were monitored on cells and in whole tissue samples. The combination of technologies and the joint discussion of results enabled us to look at nanoparticle–skin interactions and the biological relevance of our findings from different angles.

  4. Ca isotope fractionation in a high-alkalinity lake system: Mono Lake, California

    Science.gov (United States)

    Nielsen, Laura C.; DePaolo, Donald J.

    2013-10-01

    Precipitation of calcium carbonate minerals from aqueous solutions causes surface-controlled kinetic stable Ca isotope fractionation. The magnitude of fractionation depends on the relative rates of ion attachment to and detachment from the mineral surface, which in turn is predicted to depend on both the saturation state and the solution stoichiometry or the Ca:CO32- activity ratio. Experimental studies have not directly investigated the effects of varying solution stoichiometry on calcium isotope partitioning during calcite or aragonite growth, but natural alkaline lake systems such as Mono Lake, California provide a test bed for the hypothesized stoichiometry dependence. Mono Lake has a Ca:CO32- activity ratio of about 0.0001, seven orders of magnitude lower than ocean water and typical terrestrial freshwater. We present chemical and isotopic measurements of streams, springs, lake water, and precipitated carbonates from the Mono Basin that yield evidence of stoichiometry-dependent Ca isotope fractionation during calcite, aragonite and Mg-calcite precipitation from the alkaline lake water. To estimate the Ca isotope fractionation factors, it is necessary to characterize the lake Ca balance and constrain the variability of lake water chemistry both spatially and temporally. Streams and springs supply Ca to the lake, and a substantial fraction of this supply is precipitated along the lake shore to form tufa towers. Lake water is significantly supersaturated with respect to carbonate minerals, so CaCO3 also precipitates directly from the water column to form carbonate-rich bottom sediments. Growth rate inhibition by orthophosphate likely preserves the high degree of supersaturation in the lake. Strontium isotope ratios are used to estimate the proportions of fresh and alkaline lake water from which each solid carbonate sample precipitated. Carbonate minerals that precipitate directly from lake water (low Ca:CO32-) experience relatively large Ca isotope fractionation

  5. Possible recording of the Mono Lake Excursion in cored sediment from Clear Lake, California

    Science.gov (United States)

    Liddicoat, Joseph; Verosub, Kenneth

    2010-05-01

    We report the possible recording of the Mono Lake Excursion (MLE) in cored sediment from Clear Lake, CA. The locality (39.0˚N, 237.3˚E) is about 120 km north of San Francisco, CA, and 320 km northwest of the Mono Basin, CA, where the MLE first was discovered in North America (Denham and Cox, 1971). The field behaviour at Clear Lake that might be the MLE is recorded in clay and peaty clay about 50 cm below the top of the lowermost 80-cm core slug of a 21.6-m core. The coring was done by the wire-line method (Sims and Rymer, 1975) and the samples (rectangular solids 21 mm on a side and 15 mm high) were measured in a cryogenic magnetometer after demagnetization in an alternating field to 35 milliTesla (Verosub, 1977). The continuously-spaced samples record negative inclination of nearly 20˚ and northerly declination when unnormalized relative field intensity was reduced by an order of magnitude from the mean value. Those palaeomagnetic directions are followed immediately by positive inclination to about 50˚ and easterly declination of about 60˚ when the field intensity is at a relative high. That pattern of behaviour is recorded at three localities (Wilson Creek, Mill Creek, and Warm Springs) in the Mono Basin at the MLE (Liddicoat and Coe, 1979; Liddicoat, 1992). A path of the Virtual Geomagnetic Poles (VGPs) at Clear Lake form a clockwise-trending loop that is centered at 65˚N, 20˚E in the hemisphere away from the locality. The VGP that is farthest from the North Geographic Pole is at 29.3˚N, 337.1˚E, which is close to the path formed by the VGPs in the older portion of the MLE (Liddicoat and Coe, 1979; Liddicoat, 1992). The age of the sediment recording the anomalous palaeomagnetic directions in Clear Lake is about 30,000 years B.P. (Verosub, 1977). That age was determined from six (uncalibrated) radiocarbon dates, three of which are from near the base of the core (Sims and Rymer, 1975) where there are the anomalous palaeomagnetic directions, and linear

  6. Mesoscopic biology

    Indian Academy of Sciences (India)

    G V Shivashankar

    2002-02-01

    In this paper we present a qualitative outlook of mesoscopic biology where the typical length scale is of the order of nanometers and the energy scales comparable to thermal energy. Novel biomolecular machines, governed by coded information at the level of DNA and proteins, operate at these length scales in biological systems. In recent years advances in technology have led to the study of some of the design principles of these machines; in particular at the level of an individual molecule. For example, the forces that operate in molecular interactions, the stochasticity involved in these interactions and their spatio-temporal dynamics are beginning to be explored. Understanding such design principles is opening new possibilities in mesoscopic physics with potential applications.

  7. Biological programming

    OpenAIRE

    Ramsden, Jeremy J.; Bándi, Gergely

    2010-01-01

    Biology offers a tremendous set of concepts that are potentially very powerfully usable for the software engineer, but they have been barely exploited hitherto. In this position paper we propose a fresh attempt to create the building blocks of a programming technology that could be as successful as life. A key guiding principle is to develop and make use of unambiguous definitions of the essential features of life.

  8. Biological radioprotector

    International Nuclear Information System (INIS)

    According to the patent description, the biological radioprotector is deuterium depleted water, DDW, produced by vacuum distillation with an isotopic content lower than natural value. It appears as such or in a mixture with natural water and carbon dioxide. It can be used for preventing and reducing the ionizing radiation effects upon humans or animal organisms, exposed therapeutically, professionally or accidentally to radiation. The most significant advantage of using DDW as biological radioprotector results from its way of administration. Indeed no one of the radioprotectors currently used today can be orally administrated, what reduces the patients' compliance to prophylactic administrations. The biological radioprotector is an unnoxious product obtained from natural water, which can be administrated as food additive instead of drinking water. Dose modification factor is according to initial estimates around 1.9, what is a remarkable feature when one takes into account that the product is toxicity-free and side effect-free and can be administrated prophylactically as a food additive. A net radioprotective action of the deuterium depletion was evidenced experimentally in laboratory animals (rats) hydrated with DDW of 30 ppm D/(D+H) concentration as compared with normally hydrated control animals. Knowing the effects of irradiation and mechanisms of the acute radiation disease as well as the effects of administration of radiomimetic chemicals upon cellular lines of fast cell division, it appears that the effects of administrating DDW result from stimulation of the immunity system. In conclusion, the biological radioprotector DDW presents the following advantages: - it is obtained from natural products without toxicity; - it is easy to be administrated as a food additive, replacing the drinking water; - besides radioprotective effects, the product has also immunostimulative and antitumoral effects

  9. Missing particle associated with two bottom quarks at the LHC: Mono-$b$ versus 2$b$ with razor variables

    CERN Document Server

    Chen, Ning; Li, Jinmian

    2016-01-01

    The extended Higgs sector such as by a second Higgs doublet of type-II provides portals to dark sector which contains missing particles at the LHC, e.g., dark matter (DM) particle. In this paper, working in the simplified model and taking into consideration the vital wide width effect of the mediator, we analyze the characteristic signatures of mono-$b$+MET and 2$b$+MET at the LHC. The latter signature was believed to be ineffective, but we found that, with the aid of razor shape analysis, it should be as important as the mono-$b$ signature. In the region of relatively low mediator mass (below a few hundred GeV), the 2$b$-tagged razor analysis has comparable sensitivity with the mono-$b$ search when the systematic uncertainty is at percent level; it is even better for mediator lighter than $\\sim 200$ GeV.

  10. Study of the dissolution of three synthetic minerals: zirconolite, Y-britholite and mono-silicate fluor-apatite

    International Nuclear Information System (INIS)

    In this study, we were interested in the synthesis by natural sintering of three minerals analogue of natural rocks: zirconolite, Y-britholite and mono-silicated fluor-apatite. Cerium was used as an actinide surrogate. A simple physical characterization of the materials was made by X-ray diffraction and by measuring both densities and hardnesses. A static leaching test allowed determining the cerium immobilization capacity of the minerals. The most stable mineral was mono-silicated fluor-apatite, with a maximum amount of released cerium less than 2 %. For zirconolite and Y-britholite, this amount reached 15 and 18 % of the total cerium in the minerals, respectively. For the latter compounds, the cerium content in the materials was too weak, and the chosen synthesis method gave less satisfactory physicochemical mineral properties compared to those obtained for mono-silicated fluor-apatite. (authors)

  11. Benchmarking of the mono-energetic transport coefficients-results from the International Collaboration on Neoclassical Transport in Stellarators (ICNTS)

    International Nuclear Information System (INIS)

    Numerical results for the three mono-energetic transport coefficients required for a complete neoclassical description of stellarator plasmas have been benchmarked within an international collaboration. These transport coefficients are flux-surface-averaged moments of solutions to the linearized drift kinetic equation which have been determined using field-line-integration techniques, Monte Carlo simulations, a variational method employing Fourier-Legendre test functions and a finite-difference scheme. The benchmarking has been successfully carried out for past, present and future devices which represent different optimization strategies within the extensive configuration space available to stellarators. A qualitative comparison of the results with theoretical expectations for simple model fields is provided. The behaviour of the results for the mono-energetic radial and parallel transport coefficients can be largely understood from such theoretical considerations but the mono-energetic bootstrap current coefficient exhibits characteristics which have not been predicted. (special topic)

  12. Prediction of gas chromatographic retention times of polychlorinated biphenyls by mono-dimensional molecular descriptors and multivariate techniques

    Energy Technology Data Exchange (ETDEWEB)

    Mecozzi, M.; Amici, M. [Istituto Centrale per la Ricerca Scientifica e Technological Applicata al Mare, Rome (Italy); Acquistucci, R. [Istituto Nazionale per la Nutrizione e gli Alimenti, Rome (Italy)

    2003-07-01

    We report a procedure for describing the gas chromatographic retention time of polychlorinated biphenyls (PCBs) as a function of simple mono-dimensional molecular descriptors such as the number and position of chlorine atoms on the aromatic rings. The mathematical relationships between relative retention time (RRT) of all 209 possible congeners of PCBs and the mono-dimensional molecular descriptors (MDDs) were obtained by the multivariate techniques principal component regression (PCR) and partial least squares (PLS) used as modelling tools. The good agreement found between experimental and predicted retention times of PCBs shows that a well established mathematical model relating retention time to specific mono-dimensional molecular descriptors can be a useful tool to enhance identification of these pollutants in real samples. (orig.)

  13. Marine biology

    International Nuclear Information System (INIS)

    This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the nature of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index

  14. Marine biology

    Energy Technology Data Exchange (ETDEWEB)

    Thurman, H.V.; Webber, H.H.

    1984-01-01

    This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the nature of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index.

  15. The Improved Relevance Voxel Machine

    DEFF Research Database (Denmark)

    Ganz, Melanie; Sabuncu, Mert; Van Leemput, Koen

    The concept of sparse Bayesian learning has received much attention in the machine learning literature as a means of achieving parsimonious representations of features used in regression and classification. It is an important family of algorithms for sparse signal recovery and compressed sensing...... Vector Machine (RVM) [4] in 2001. While the concept of RVM was intriguing, problems with the approach were the run time which is approximately cubic in the number of basis functions as well as the greedy optimization. Hence, different approaches to overcome these shortcomings were developed, e.g. [5] or...... [6] as well as Tipping himself in [7] (FastRVM). Recently, Sabuncu and Van Leemput [8, 9] extended the relevance vector machine by incorporating an additional spatial regularization term in the Gaussian prior on the regression weights or classification features (RVoxM). RVoxM encourages spatial...

  16. Long-term thermophilic mono-digestion of rendering wastes and co-digestion with potato pulp

    Energy Technology Data Exchange (ETDEWEB)

    Bayr, S., E-mail: suvi.bayr@jyu.fi; Ojanperä, M.; Kaparaju, P.; Rintala, J.

    2014-10-15

    Highlights: • Rendering wastes’ mono-digestion and co-digestion with potato pulp were studied. • CSTR process with OLR of 1.5 kg VS/m{sup 3} d, HRT of 50 d was unstable in mono-digestion. • Free NH{sub 3} inhibited mono-digestion of rendering wastes. • CSTR process with OLR of 1.5 kg VS/m{sup 3} d, HRT of 50 d was stable in co-digestion. • Co-digestion increased methane yield somewhat compared to mono-digestion. - Abstract: In this study, mono-digestion of rendering wastes and co-digestion of rendering wastes with potato pulp were studied for the first time in continuous stirred tank reactor (CSTR) experiments at 55 °C. Rendering wastes have high protein and lipid contents and are considered good substrates for methane production. However, accumulation of digestion intermediate products viz., volatile fatty acids (VFAs), long chain fatty acids (LCFAs) and ammonia nitrogen (NH{sub 4}-N and/or free NH{sub 3}) can cause process imbalance during the digestion. Mono-digestion of rendering wastes at an organic loading rate (OLR) of 1.5 kg volatile solids (VS)/m{sup 3} d and hydraulic retention time (HRT) of 50 d was unstable and resulted in methane yields of 450 dm{sup 3}/kg VS{sub fed}. On the other hand, co-digestion of rendering wastes with potato pulp (60% wet weight, WW) at the same OLR and HRT improved the process stability and increased methane yields (500–680 dm{sup 3}/kg VS{sub fed}). Thus, it can be concluded that co-digestion of rendering wastes with potato pulp could improve the process stability and methane yields from these difficult to treat industrial waste materials.

  17. Magmatic gas emissions at Holocene volcanic features near Mono Lake, California, and their relation to regional magmatism

    Science.gov (United States)

    Bergfeld, Deborah; Evans, William C.; Howle, James F.; Hunt, Andrew G.

    2015-02-01

    Silicic lavas have erupted repeatedly in the Mono Basin over the past few thousand years, forming the massive domes and coulees of the Mono Craters chain and the smaller island vents in Mono Lake. We report here on the first systematic study of magmatic CO2 emissions from these features, conducted during 2007-2010. Most notably, a known locus of weak steam venting on the summit of North Coulee is actually enclosed in a large area (~ 0.25 km2) of diffuse gas discharge that emits 10-14 t/d of CO2, mostly at ambient temperature. Subsurface gases sampled here are heavily air-contaminated, but after standard corrections are applied, show average δ13C-CO2 of - 4.72‰, 3He/4He of 5.89RA, and CO2/3He of 0.77 × 1010, very similar to the values in fumarolic gas from Mammoth Mountain and the Long Valley Caldera immediately to the south of the basin. If these values also characterize the magmatic gas source at Mono Lake, where CO2 is captured by the alkaline lake water, a magmatic CO2 upflow beneath the lake of ~ 4 t/d can be inferred. Groundwater discharge from the Mono Craters area transports ~ 13 t/d of 14C-dead CO2 as free gas and dissolved carbonate species, and adding in this component brings the estimated total magmatic CO2 output to 29 t/d for the two silicic systems in the Mono Basin. If these emissions reflect intrusion and degassing of underlying basalt with 0.5 wt.% CO2, a modest intrusion rate of 0.00075 km3/yr is indicated. Much higher intrusion rates are required to account for CO2 emissions from Mammoth Mountain and the West Moat of the Long Valley Caldera.

  18. Mono-colonization with Lactobacillus acidophilus NCFM affects the intestinal metabolome as compared to germ-free mice

    DEFF Research Database (Denmark)

    Roager, Henrik Munch; Sulek, Karolina; Skov, Kasper; Frandsen, Henrik Lauritz; Smedsgaard, Jørn; Wilcks, Andrea; Hjort Skov, Thomas; Granato Villas-Boas, Silas; Licht, Tine Rask

    colonizing bacteria. In this study the effect of the Lactobacillus acidophilus NCFM strain was investigated by comparing the metabolome of mono-colonized and germ-free mice in several compartments. By liquid-chromatography coupled to mass spectrometry, we were able to show that the metabolome differed...... between the mono-colonized and germ-free mice, not only in ileum, caecum and colon, but also in plasma and liver. These observations suggest that L. acidophilus NCFM highly influence the metabolism in multiple compartments, underlying that the gut microbiota metabolism affects the host systemic metabolism....

  19. The ankyrin repeats of G9a and GLP histone methyltransferases are mono- and dimethyllysine binding modules

    OpenAIRE

    Collins, Robert E.; Northrop, Jeffrey P.; Horton, John R.; David Y. Lee; Zhang, Xing; Stallcup, Michael R.; Cheng, Xiaodong

    2008-01-01

    Histone modifications have important roles in transcriptional control, mitosis and heterochromatin formation. G9a and G9a-like protein (GLP) are euchromatin-associated methyltransferases that repress transcription by mono- and dimethylating histone H3 at Lys9 (H3K9). Here we demonstrate that the ankyrin repeat domains of G9a and GLP bind with strong preference to N-terminal H3 peptides containing mono- or dimethyl K9. X-ray crystallography revealed the basis for recognition of the methylated ...

  20. Assessing Li and other leachable geochemical proxies for paleo-salinity in lake sediments from the Mono Basin, CA (USA)

    Science.gov (United States)

    Sahajpal, Rahul; Zimmerman, Susan R. H.; Datta, Saugata; Hemming, N. Gary; Hemming, Sidney R.

    2011-12-01

    Regional climate-driven hydrological changes are accompanied by salinity changes in closed basin lakes. We have investigated acid leachable Li, along with other leachable ions including Mg, Ca and Sr, as geochemical proxies of salinity in lake sediments in the Mono Basin, California. All the elements in the acid leachable suite show a strong correlation with paleo-lake level estimates based on physical and stratigraphic evidence. The CaCO 3 content of lake sediments, which has been shown to be a reliable proxy for lake level changes in the Mono basin and the adjoining Owens Lake basin, corresponds well with our acid-leachable proxy data.