WorldWideScience

Sample records for benthic worm neanthes

  1. Frequencies of chromosomal aberrations and sister chromatid exchanges in the benthic worm Neanthes arenaceodentata exposed to ionizing radiation

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, F.L.; Rice, D.W. Jr., Moore, D.H.

    1984-07-01

    Traditional bioassays are unsuitable for assessing sublethal effects from ocean disposal of low-level radioactive waste because mortality and phenotypic responses are not anticipated. We compared the usefulness of chromosomal aberration and sister chromatid exchange (SCE) induction as measures of low-level radiation effects in a sediment-dwelling marine worm, Neanthes arenaceodentata. The SCEs, in contrast to chromosomal aberrations, do not alter the overall chromosome morphology and in mammalian cells appear to be a more sensitive indicator of DNA alterations caused by environmental mutagens. Newly hatched larvae were exposed to two radiation-exposure regimes of either x rays at a high dose rate of 0.7 Gy (70 rad)/min for as long as 5.5 min or to /sup 60/Co gamma rays at a low dose rate of from 4.8 x 10/sup -5/ to 1.2 x 10/sup -1/ Gy (0.0048 to 12 rad)/h for 24 h. After irradiation, the larvae were exposed to 3 x 10/sup -5/M bromodeoxyuridine (BrdUrd) for 28 h (x-ray-irradiated larvae) or for 54 h (/sup 60/Co-irradiated larvae). Larval cells were examined for the proportion of cells in first, second, and third or greater division. Frequencies of chromosomal aberrations and SCEs were determined in first and second division cells, respectively. Results from x-ray irradiation indicated that dose-related increases occur in chromosome and chromatid deletions, but a dose of equal or greater 2 Gy (equal to or greater than 200 rad) was required to observe a significant increase. Worm larvae receiving /sup 60/Co irradiation showed elevated SCE frequencies with a significant increase of 0.6 Gy (60 rad). We suggest that both SCEs and chromosomal aberrations may be useful for measuring effects on genetic material induced by radiation. 56 references, 7 figures, 9 tables.

  2. The effects of chronic radiation on reproductive success of the polychaete worm Neanthes arenaceodentata

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, F.L.; Anderson, S.L.

    1988-12-01

    The effects of lifetime exposure to chronic irradiation on reproductive success were assessed for laboratory populations of the polychaete worm Neanthes arenaceodentata. Lifetime exposure was initiated upon the spawning of the P1 female and was terminated upon spawning of the F1 female. Groups of experimental worms received either no radiation (controls) or 0.19, 2.1, or 17 mGy/h. The total dose received by the worms was either background or approximately 0.55, 6.5, or 54 Gy, respectively. The broods from the F1 mated pairs were sacrificed before hatching occurred, and information was obtained on brood size, on the number of normal and abnormal embryos, and on the number of embryos that were living, dying, and dead. The mean number of embryos in the broods from the F1 females exposed to lifetime radiation of 0.19 and 2.1 mGy/h was not significantly different from the mean number of embryos from control females; however, the mean number of embryos was different from those F1 females exposed to 17 mGy/h. There was a significant reduction in the number of live embryos in the broods from the F1 mated pairs that were exposed to the lowest dose rate given, 0.19 mGy/h, as well as those exposed to 2.1 and 17 mGy/h. Also, increased percentages of abnormal embryos were determined in the broods of all the radiation-exposed groups. 39 refs., 10 figs., 15 tabs.

  3. Proteomic Changes between Male and Female Worms of the Polychaetous Annelid Neanthes arenaceodentata before and after Spawning

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2013-08-30

    The Neanthes acuminata species complex (Polychaeta) are cosmopolitan in distribution. Neanthes arenaceodentata, complex, has been widely used as toxicological test animal in the marine environment. Method of reproduction is unique in this polychaete complex. Same sexes fight and opposite sexes lie side by side until egg laying. Females lose about 75% of their weight and die after laying eggs. The male, capable of reproducing up to nine times, fertilizes the eggs and incubates the embryos for 3-4 weeks. The objective of this study was to determine if there is any set of proteins that influences this unique pattern of reproduction. Gel-based two-dimensional electrophoresis (2-DE) and gel-free quantitative proteomics methods were used to identify differential protein expression patterns before and after spawning in both male and female N. arenaceodentata. Males showed a higher degree of similarity in protein expression patterns but females showed large changes in phosphoproteme before and after spawning. There was a decrease (about 70%) in the number of detected phosphoproteins in spent females. The proteins involved in muscular development, cell signaling, structure and integrity, and translation were differentially expressed. This study provides proteomic insights of the male and female worms that may serve as a foundation for better understanding of unusual reproductive patterns in polychaete worms. © 2013 Chandramouli et al.

  4. Proteomic changes between male and female worms of the polychaetous annelid Neanthes arenaceodentata before and after spawning.

    Directory of Open Access Journals (Sweden)

    Kondethimmanahalli H Chandramouli

    Full Text Available The Neanthesacuminata species complex (Polychaeta are cosmopolitan in distribution. Neanthesarenaceodentata, Southern California member of the N. acuminata complex, has been widely used as toxicological test animal in the marine environment. Method of reproduction is unique in this polychaete complex. Same sexes fight and opposite sexes lie side by side until egg laying. Females lose about 75% of their weight and die after laying eggs. The male, capable of reproducing up to nine times, fertilizes the eggs and incubates the embryos for 3-4 weeks. The objective of this study was to determine if there is any set of proteins that influences this unique pattern of reproduction. Gel-based two-dimensional electrophoresis (2-DE and gel-free quantitative proteomics methods were used to identify differential protein expression patterns before and after spawning in both male and female N. arenaceodentata. Males showed a higher degree of similarity in protein expression patterns but females showed large changes in phosphoproteme before and after spawning. There was a decrease (about 70% in the number of detected phosphoproteins in spent females. The proteins involved in muscular development, cell signaling, structure and integrity, and translation were differentially expressed. This study provides proteomic insights of the male and female worms that may serve as a foundation for better understanding of unusual reproductive patterns in polychaete worms.

  5. Worm

    CERN Document Server

    Bowden, Mark

    2012-01-01

    Worm is the gripping story of the 'Conficker' computer virus- which, since its introduction in November 2008, has infected millions of computers around the world - and the cyber security elites who have joined forces in a high-tech game of cops and robbers to find its creators and defeat them. This dramatic cybercrime story travels from the Ukraine to the United States (and all parts in between) to explore the next frontier in terrorism. It is the story of a dazzling battle of wits over the future of the Internet. In Worm, Mark Bowden delivers an unputdownable account of the ongoing and large

  6. Programmed Worms.

    Science.gov (United States)

    Piele, Donald T.

    1982-01-01

    A hungry worm is looking for something to eat according to very specific rules, and the path he takes is a graph. The problem is detailed in Applesoft BASIC using low resolution graphics for worms that turn 90 degrees and high resolution for worms that can turn 45 degrees. (MP)

  7. Survival and Growth of the Marine Polychaete, Neanthes arenaceodentata, Following Laboratory Exposure to Copper-Spiked Sediment.

    Science.gov (United States)

    Ward, Timothy J; Gaertner, Karin E; Gorsuch, Joseph W; Call, Daniel J

    2015-10-01

    Juvenile marine polychaetes, Neanthes arenaceodentata, were exposed for 28 days to copper (Cu)-spiked sediment at six concentrations ranging from 48.3 to 2380 mg Cu/kg dry sediment, plus control. Survival was reduced (p ≤ 0.05) at concentrations ≥1190 mg Cu/kg. Growth was inhibited at Cu concentrations ≥506 mg Cu/kg. Dose-response relationships yielded LC10 and LC50 estimates of 514 and 1230 mg Cu/kg, respectively. The growth effect EC50 estimate was 409 mg Cu/kg. Ranges for the no observable effect concentration and lowest observable effect concentration were 506-1190 mg Cu/kg for survival, and 230-506 mg Cu/kg for growth. Pore water concentrations of Cu were 38.7-65.8 µg Cu/L in exposures where toxic effects were observed, compared to a range of 15.1-22.4 µg Cu/L in exposures where significant effects were not evident. The results of the study were compared with empirical and mechanistic sediment quality guidelines for the protection of benthic organisms.

  8. Living with Worms

    DEFF Research Database (Denmark)

    Bertoni, Filippo

    2016-01-01

    The thesis explores what living together can offer in rethinking political theory and in creating a space in which "politics" is not just a matter between people, but also with nature. These lessons about living together emerge from fieldwork around practices in which worms are central. Thus......, the work focuses on ecologists who, in turn, examine worms; and worms amateurs who learn to collect and identify them in the field. Composting, and the waste-eating of earthworms are also experimented with. The "living together " that worms unearth is about eating and being eaten - a set of relations...

  9. WormBase

    Data.gov (United States)

    U.S. Department of Health & Human Services — WormBase is an international consortium of biologists and computer scientists dedicated to providing the research community with accurate, current, accessible...

  10. Immunity Based Worm Detection System

    Institute of Scientific and Technical Information of China (English)

    HONG Zheng; WU Li-fa; WANG Yuan-yuan

    2007-01-01

    Current worm detection methods are unable to detect multi-vector polymorphic worms effectively.Based on negative selection mechanism of the immune system,a local network worm detection system that detects worms was proposed.Normal network service requests were represented by self-strings,and the detection system used self-strings to monitor the network for anomaly.According to the properties of worm propagation,a control center correlated the anomalies detected in the form of binary trees to ensure the accuracy of worm detection.Experiments show the system to be effective in detecting the traditional as well as multi-vector polymorphic worms.

  11. Benthic Cover

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic cover (habitat) maps are derived from aerial imagery, underwater photos, acoustic surveys, and data gathered from sediment samples. Shallow to moderate-depth...

  12. Benthic foraminifera

    Digital Repository Service at National Institute of Oceanography (India)

    Saraswat, R.; Nigam, R.

    (Nolet and Corliss, 1990). Differences in the abundance of oxygen-sensitive and dissolution-prone benthic foraminiferal species between the Last Glacial Maximum (LGM) and the Holocene in the abyssal waters of the southwestern Gulf of Mexico were used... (2009) Deep-sea benthic diversity linked to seasonality of pelagic productivity. Deep Sea Research Part I: Oceanographic Research Papers 56: 835-841. Culver S (1988) New foraminiferal depth zonation of the northwestern Gulf of Mexico. Palaios 3: 69...

  13. Worms, Worms, and Even More Worms: A Vermicomposting Guide for Teachers.

    Science.gov (United States)

    California Integrated Waste Management Board, Sacramento.

    This guide is designed to help teachers gain a better understanding of how to get a worm vermicomposting system started. It provides reference curricula materials for using worms in the classroom. Chapters include: (1) "Why Worm Vermicomposting;" (2) "Basics of Vermicomposting;" (3) "Worm Facts;" (4) "Classroom Activities;" (5) "Lab Activities;"…

  14. Proteomic Changes Associated with Successive Reproductive Periods in Male Polychaetous Neanthes arenaceodentata

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2015-09-04

    The polychaetous annelid Neanthes acuminata complex has a widespread distribution, with the California population referred to as N. arenaceodentata. The reproductive pattern in this complex is unique, in that the female reproduces once and then dies, whereas the male can reproduce up to nine times. The male incubates the embryos until the larvae leave the male’s tube 21–28 days later and commences feeding. Reproductive success and protein expression patterns were measured over the nine reproductive periods. The percent success of the male in producing juveniles increased during the first three reproductive periods and then decreased, but the number of juveniles produced was similar through all nine periods. iTRAQ based quantitative proteomics were used to analyze the dynamics of protein expression patterns. The expression patterns of several proteins were found to be altered. The abundant expression of muscular and contractile proteins may have affected body weight and reproductive success. Sperm have never been observed; fertilization occurs within the parent’s tube. Proteins associated with sperm maturation and fertilization were identified, including ATPase, clathrin, peroxiredoxins and enolase, which may provide clues to the molecular mechanisms enabling males to reproduce multiple times.

  15. Worm Infections in Children.

    Science.gov (United States)

    Weatherhead, Jill E; Hotez, Peter J

    2015-08-01

    • On the basis of research evidence, worm infections are important global child health conditions causing chronic disability that lasts from childhood into adulthood (Table 1). (2)(3) Evidence Quality: B • On the basis of research evidence, the major worm infections found in developing countries include ascariasis, trichuriasis, hookworm infection, and schistosomiasis; toxocariasis, enterobiasis, and cysticercosis are also found in poor regions of North America and Europe. (4)(9)(13) Evidence Quality: B • On the basis of expert consensus, children and adolescents are often vulnerable to acquiring large numbers of worms, ie, high-intensity infections (Fig 1)(21)(22)(23) Evidence Quality: D • On the basis of expert consensus and research evidence, moderate and heavy worm burdens cause increased morbidity because of growth and intellectual stunting in children and adolescents. Many of these effects may result from helminth-induced malnutrition. (21)(22)(23) Evidence Quality: C • On the basis of expert consensus and research evidence, worm infections are also commonly associated with eosinophilia. (48) (49) Evidence Quality: B • On the basis of research evidence as well as consensus, helminthes can cause inflammation in the lung (asthma), gastrointestinal tract (enteritis and colitis), liver (hepatitis and fibrosis), and urogenital tract. (7)(21)(22)(23)(27)(28)(40)(41)(43) Evidence Quality: B • On the basis of research evidence, microscopy techniques for diagnosis of worm infections in children often exhibit suboptimal sensitivities and specificities, necessitating new or improved diagnostic modalities such as polymerase chain reaction. (54)(55) Evidence Quality: A • On the basis of research evidence and expert consensus, mass drug administration (“preventive chemotherapy”) has becomea standard practice for ministries of health in low- and middle-income countries to control intestinal helminth infections and schistosomiasis. (67)(68) Evidence

  16. A Can of Sea Worms

    Science.gov (United States)

    Zinn, Donald J.

    1977-01-01

    A comprehensive discussion of the free-living worms that inhabit the beaches and subtidal bottoms of the Cape Cod shoreline is presented. Methods for the location, collection, preservation, and identification of sea worms are identified. (BT)

  17. Weird and wonderful worms

    NARCIS (Netherlands)

    Wassink, J.

    2015-01-01

    In the WaterLab, biotechnologist Steef de Valk is carrying out experiments with tubifex worms. These threadlike creatures are capable of reducing by half the quantity of sewage sludge from water treatment. No-one really understands how this works.

  18. Intelligent System for Worm Detection

    Directory of Open Access Journals (Sweden)

    Tarek S. Sobh

    2009-01-01

    Full Text Available Worms are on the top of malware threats attacking computer system although of the evolution of worms detectiontechniques. Early detection of unknown worms is still a problem. This paper produce a method for detecting unknown wormsbased on local victim information. The proposed system uses Artificial Neural Network (ANN for classifying worm/ nonwormtraffic and predicting the percentage of infection in the infected network. This prediction can be used to support decisionmaking process for network administrator to respond quickly to worm propagation in an accurate procedure.

  19. Worm attack detection and response

    Institute of Scientific and Technical Information of China (English)

    CHEN Bo; YU Xiangzhan; FANG Binxing; YUN Xiaochun

    2007-01-01

    There appear many Internet-scale worm incidents in recent years,which have caused severe damage to the society.It is clear that a simple self-propagation worm can quickly spread across the Internet.Therefore,it is necessary to implement automatic mitigation which can detect worm and drop its packet.In this paper,the worm's framework was first analyzed and its two characteristies were detected.Based on the two characteristics,a defending algorithm was presented to protect network.Experimental results verify that our algorithm is very effective to constrain the worm propagation and meanwhile it almost does not interfere in normal activity.

  20. How algae influence sessile marine organisms: The tube worms case of study

    Science.gov (United States)

    Casoli, Edoardo; Bonifazi, Andrea; Ardizzone, Giandomenico; Gravina, Maria Flavia

    2016-09-01

    Tube worms and phytobenthic assemblages in three infralittoral and shallow circalittoral Mediterranean benthic communities developed between 5 and 35 m depth at Punta del Lazzaretto (Giglio Island, Central Thyrrenian sea) were investigated. Despite being three algae-dominated habitats, these displayed different covering both in terms of algal layers and algal morphologies, reflecting different structural organizations. Twenty-eight serpulid taxa have been reported, increasing both diversity and density values from most photophilic to most sciaphilous habitats. Multivariate analyses showed how algal thalli and tube worm assemblages were strongly correlated; substrata are influenced both physically and biologically, providing different conditions for tube worm settlement.

  1. Galactic worms. I - Catalog of worm candidates

    Science.gov (United States)

    Koo, Bon-Chul; Heiles, Carl; Reach, William T.

    1992-01-01

    A catalog of candidates for the Galactic worms that are possibly the walls surrounding the superbubbles is compiled; 118 isolated structures that appear both in H I and in IR (60 and 100 microns). Fifty-two are possibly associated with H II regions. It is found that the 100-micron emissivity increases systematically toward the Galactic interior, which is consistent with the increase of the general interstellar radiation field. The 100-micron emissivity of the structures associated with the H II regions is larger than that of the structures without associated H II regions. The 60-100-micron ratio is large, 0.28 +/- 0.03, which may indicate that the grains associated with the atomic gas have a relatively large population of small grains. Thirty-five structures appear in the 408-MHz continuum. The IR and the radio continuum properties suggest that the 408-MHz continuum emission in those structures is very likely thermal. The implications of these results on the ionization of gas far from the Galactic plane are discussed.

  2. Modal Analysis of Worm and Worm Gear Based on ANSYS Workbench

    Directory of Open Access Journals (Sweden)

    Liu Yichang

    2015-01-01

    Full Text Available To establish the three-dimensional model of the worm and worm gear by using SolidWorks. On the worm and worm gear modal analysis is carried out by using finite element analysis software ANSYS Workbench. Obtain the first 6 order natural frequency and vibration mode characteristics of worm and worm gear. Modal analysis laid the foundation for further study on dynamics analysis, Also for the worm and worm gear structure optimization design provides a reference.

  3. Characterizing Internet Worm Infection Structure

    CERN Document Server

    Wang, Qian; Chen, Chao

    2010-01-01

    Internet worm infection continues to be one of top security threats. Moreover, worm infection has been widely used by botnets to recruit new bots and construct P2P-based botnets. In this work, we attempt to characterize the network structure of Internet worm infection and shed light on the micro-level information of "who infects whom." Our work quantifies the infection ability of individual hosts and reveals the key characteristics of the underlying topologies formed by worm infection, i.e., the number of children and the generation of the Internet worm infection family tree. Specifically, we first analyze the infection tree of a wide class of worms, for which a new victim is compromised by each existing infected host with equal probability. We find that the number of children has asymptotically a geometric distribution with parameter 0.5. We also discover that the generation follows closely a Poisson distribution and the average path length of the worm infection family tree increases approximately logarithmi...

  4. Worms by number.

    Science.gov (United States)

    Glasby, C J; Glasby, S P; Pleijel, F

    2008-09-22

    This paper investigates alternation patterns in length, shape and orientation of dorsal cirri (fleshy segmental appendages) of phyllodocidans, a large group of polychaete worms (Annelida). We document the alternation patterns in several families of Phyllodocida (Syllidae, Hesionidae, Sigalionidae, Polynoidae, Aphroditidae and Acoetidae) and identify the simple mathematical rule bases that describe the progression of these sequences. Two fundamentally different binary alternation patterns were found on the first four segments: 1011 for nereidiform families and 1010 for aphroditiform families. The alternation pattern in all aphroditiform families matches a simple one-dimensional cellular automaton and that for Syllidae (nereidiform) matches the Fibonacci string sequence. Hesionidae (nereidiform) showed the greatest variation in alternation patterns, but all corresponded to various known substitution rules. Comparison of binary patterns of the first 22 segments using a distance measure supports the current ideas on phylogeny within Phyllodocida. These results suggest that gene(s) involved in post-larval segmental growth employ a switching sequence that corresponds to simple mathematical substitution rules.

  5. Internet worm early detection and response mechanism

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    In recent years, fast spreading worm has become one of the major threats to the security of the Internet and has an increasingly fierce tendency.In view of the insufficiency that based on Kalman filter worm detection algorithm is sensitive to interval, this article presents a new data collection plan and an improved worm early detection method which has some deferent intervals according to the epidemic worm propagation model, then proposes a worm response mechanism for slowing the wide and fast worm propagation effectively.Simulation results show that our methods are able to detect worms accurately and early.

  6. Encounter-based worms: Analysis and Defense

    CERN Document Server

    Tanachaiwiwat, Sapon

    2007-01-01

    Encounter-based network is a frequently-disconnected wireless ad-hoc network requiring immediate neighbors to store and forward aggregated data for information disseminations. Using traditional approaches such as gateways or firewalls for deterring worm propagation in encounter-based networks is inappropriate. We propose the worm interaction approach that relies upon automated beneficial worm generation aiming to alleviate problems of worm propagations in such networks. To understand the dynamic of worm interactions and its performance, we mathematically model worm interactions based on major worm interaction factors including worm interaction types, network characteristics, and node characteristics using ordinary differential equations and analyze their effects on our proposed metrics. We validate our proposed model using extensive synthetic and trace-driven simulations. We find that, all worm interaction factors significantly affect the pattern of worm propagations. For example, immunization linearly decrea...

  7. LUBRICATION BASIS THEORY OF WORM PAIR AND TEMPERATURE DISTRIBUTION ON WORM GEAR SURFACE

    Institute of Scientific and Technical Information of China (English)

    1998-01-01

    The lubrication basis theory of worm pair is given. The lubrication state of worm gear is analyzed. It is found that the temperature distribution on the tooth surface of worm gear is closely related with the lubrication state and that the temperature on the tooth surface of worm gear is consistent with the characteristic term of mesh and motion of worm pair.

  8. New Multi-step Worm Attack Model

    OpenAIRE

    Robiah, Y.; Rahayu, S. Siti; Shahrin , S.; M. FAIZAL A.; Zaki, M. Mohd; Marliza, R.

    2010-01-01

    The traditional worms such as Blaster, Code Red, Slammer and Sasser, are still infecting vulnerable machines on the internet. They will remain as significant threats due to their fast spreading nature on the internet. Various traditional worms attack pattern has been analyzed from various logs at different OSI layers such as victim logs, attacker logs and IDS alert log. These worms attack pattern can be abstracted to form worms' attack model which describes the process of worms' infection. Fo...

  9. Brocade SilkWorm 3250

    Institute of Scientific and Technical Information of China (English)

    张越

    2004-01-01

    Brocade SilkWorm 3250是一款8端口的入门级光纤交换机产品。它采用1U设计,主要被设计用来简化SAN存储系统的部署和监控管理。作为基于Brocade第三代通信技术的产品之一.SilkWorm 3250能够提供2Gbps的光纤通道吞吐量.可大幅度改善交换机的运行状况。

  10. Metabolism of polychaete Neanthes japonica Izuka: relations to temperature, salinity and body weight

    Institute of Scientific and Technical Information of China (English)

    LIU Yong; XIAN Weiwei; SUN Shichun

    2009-01-01

    Polychaete Neanthesjaponica is a species geographically specific in China and Japan with important scientific implication and commercial value. In this study, the relations of body weight, salinity and temperature to oxygen consumption and ammonia excretion of N. japonica were determined. Threedifferent groups in body weight (large: 2.34±0.36 g, middle: 1.50±0.21 g and small: 0.62±0.12 g) were set for all experiments. Results show that the body weight is negatively related to the rates of oxygen consumption and ammonia excretion; and the relationship is significant. The oxygen consumption and ammonia excretion at 24℃ decreased at salinity from 5 to 30 and increased above 30, indicating that both lower and higher salinity are adverse and certain degree of salinity stress is necessary for enhancing the energy demand. At salinity 30, rising temperature from 18℃ to 30℃, the oxygen consumption increased before 27℃ and then decreased. However, the relation of ammonia excretion and temperature seems more complex. Two-way ANOVA shows that salinity, temperature and body weight all have a significant effect on the oxygen consumption and ammonia excretion of the worm. Moreover, interaction between salinity/temperature and body weight is also significant. O:N (oxygen/nitrogen) ratio varies greatly in this case from 5.97 to 463.22, indicating that N. japonica can regulate the type of metabolic substrate against environment changes.

  11. Guinea Worm in a Frog

    Centers for Disease Control (CDC) Podcasts

    2017-03-09

    Dr. Mark Eberhard, a retired parasitologist and CDC guest researcher, discusses Guinea worm infection in a wild-caught frog.  Created: 3/9/2017 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 3/9/2017.

  12. Defense and detection strategies against Internet worms

    CERN Document Server

    Nazario, José

    2004-01-01

    This is the first book focused exclusively on Internet worms, offering you solid worm detection and mitigation strategies for your work in the field. This ground-breaking volume enables you to put rising worm trends into perspective with practical information in detection and defense techniques utilizing data from live networks, real IP addresses, and commercial tools. The book helps you understand the classifications and groupings of worms, and offers a deeper understanding of how they threaten network and system security.

  13. New Multi-step Worm Attack Model

    CERN Document Server

    Robiah, Y; Shahrin, S; Faizal, M A; Zaki, M Mohd; Marliza, R

    2010-01-01

    The traditional worms such as Blaster, Code Red, Slammer and Sasser, are still infecting vulnerable machines on the internet. They will remain as significant threats due to their fast spreading nature on the internet. Various traditional worms attack pattern has been analyzed from various logs at different OSI layers such as victim logs, attacker logs and IDS alert log. These worms attack pattern can be abstracted to form worms' attack model which describes the process of worms' infection. For the purpose of this paper, only Blaster variants were used during the experiment. This paper proposes a multi-step worm attack model which can be extended into research areas in alert correlation and computer forensic investigation.

  14. Low dimensional worm-holes

    Science.gov (United States)

    Samardzija, Nikola

    1995-01-01

    A simple three dimensional physical model is proposed to qualitatively address a particular type of dynamics evolving on toroidal structures. In the phase space this dynamics creates appearance of a worm-hole through which a chaotic, quasiperiodic and periodic behaviors are formed. An intriguing topological property of such a system is that it possesses no steady state solutions. As such, it opens some interesting questions in the bifurcation theory. The model also offers a novel qualitative tool for explaining some recently reported experimental and simulation results observed in physics, chemistry and biology.

  15. Worms--a "license to kill".

    Science.gov (United States)

    Kaminsky, Ronald; Rufener, Lucien; Bouvier, Jacques; Lizundia, Regina; Schorderet Weber, Sandra; Sager, Heinz

    2013-08-01

    Worm infections can cause severe harm and death to both humans and numerous domestic and wild animals. Despite the fact that there are many beneficial worm species, veterinarians, physicians and parasitologists have multiple reasons to combat parasitic worms. The pros and cons of various approaches for the discovery of new control methods are discussed, including novel anthelmintics, vaccines and genetic approaches to identify novel drug and vaccine targets. Currently, the mainstay of worm control remains chemotherapy and prophylaxis. The importance of knowledgeable and wise use of the available anthelmintics is highlighted.

  16. From Flowers to Worms: Understanding Nature's Cycle.

    Science.gov (United States)

    Texas Child Care, 1995

    1995-01-01

    Gardening helps children learn how plants sprout, grow, bloom, and then wither away, leaving seeds behind. Participating in this natural process allows children to experience the stages of life. Suggested gardening activities include studying dandelions, focusing on culture for garden plant selection, and constructing a worm box or worm terrarium…

  17. Intraocular live male filarial Loa loa worm.

    Science.gov (United States)

    Eballe, André Omgbwa; Epée, Emillienne; Koki, Godefroy; Owono, Didier; Mvogo, Côme Ebana; Bella, Assumpta Lucienne

    2008-12-01

    We report a case of Loa loa filariasis in an 8-month-old child who presented with a 3-month history of irritated acute red eye and insomnia. Examination revealed a living and active adult Loa loa worm in the anterior chamber of the left eye. The worm was extracted under general anesthetic.

  18. Method of accurate grinding for single enveloping TI worm

    Institute of Scientific and Technical Information of China (English)

    SUN; Yuehai; ZHENG; Huijiang; BI; Qingzhen; WANG; Shuren

    2005-01-01

    TI worm drive consists of involute helical gear and its enveloping Hourglass worm. Accurate grinding for TI worm is the key manufacture technology for TI worm gearing being popularized and applied. According to the theory of gear mesh, the equations of tooth surface of worm drive are gained, and the equation of the axial section profile of grinding wheel that can accurately grind TI worm is extracted. Simultaneously,the relation of position and motion between TI worm and grinding wheel are expounded.The method for precisely grinding single enveloping TI worm is obtained.

  19. An introduction to worm lab: from culturing worms to mutagenesis.

    Science.gov (United States)

    Chaudhuri, Jyotiska; Parihar, Manish; Pires-daSilva, Andre

    2011-01-11

    This protocol describes procedures to maintain nematodes in the laboratory and how to mutagenize them using two alternative methods: ethyl methane sulfonate (EMS) and 4, 5', 8-trimethylpsoralen combined with ultraviolet light (TMP/UV). Nematodes are powerful biological systems for genetics studies because of their simple body plan and mating system, which is composed of self-fertilizing hermaphrodites and males that can generate hundreds of progeny per animal. Nematodes are maintained in agar plates containing a lawn of bacteria and can be easily transferred from one plate to another using a pick. EMS is an alkylating agent commonly used to induce point mutations and small deletions, while TMP/UV mainly induces deletions. Depending on the species of nematode being used, concentrations of EMS and TMP will have to be optimized. To isolate recessive mutations of the nematode Pristionchus pacificus, animals of the F2 generation were visually screened for phenotypes. To illustrate these methods, we mutagenized worms and looked for Uncoordinated (Unc), Dumpy (Dpy) and Transformer (Tra) mutants.

  20. Biodiversity in Benthic Ecology

    DEFF Research Database (Denmark)

    Friberg, Nikolai; Carl, J. D.

    Foreword: This proceeding is based on a set of papers presented at the second Nordic Benthological Meeting held in Silkeborg, November 13-14, 1997. The main theme of the meeting was biodiversity in benthic ecology and the majority of contributions touch on this subject. In addition, the proceeding...

  1. WDDD: Worm Developmental Dynamics Database

    Science.gov (United States)

    Kyoda, Koji; Adachi, Eru; Masuda, Eriko; Nagai, Yoko; Suzuki, Yoko; Oguro, Taeko; Urai, Mitsuru; Arai, Ryoko; Furukawa, Mari; Shimada, Kumiko; Kuramochi, Junko; Nagai, Eriko; Onami, Shuichi

    2013-01-01

    During animal development, cells undergo dynamic changes in position and gene expression. A collection of quantitative information about morphological dynamics under a wide variety of gene perturbations would provide a rich resource for understanding the molecular mechanisms of development. Here, we created a database, the Worm Developmental Dynamics Database (http://so.qbic.riken.jp/wddd/), which stores a collection of quantitative information about cell division dynamics in early Caenorhabditis elegans embryos with single genes silenced by RNA-mediated interference. The information contains the three-dimensional coordinate values of the outlines of nuclear regions and the dynamics of the outlines over time. The database provides free access to 50 sets of quantitative data for wild-type embryos and 136 sets of quantitative data for RNA-mediated interference embryos corresponding to 72 of the 97 essential embryonic genes on chromosome III. The database also provides sets of four-dimensional differential interference contrast microscopy images on which the quantitative data were based. The database will provide a novel opportunity for the development of computational methods to obtain fresh insights into the mechanisms of development. The quantitative information and microscopy images can be synchronously viewed through a web browser, which is designed for easy access by experimental biologists. PMID:23172286

  2. Detecting Internet Worms Using Data Mining Techniques

    Directory of Open Access Journals (Sweden)

    Muazzam Siddiqui

    2008-12-01

    Full Text Available Internet worms pose a serious threat to computer security. Traditional approaches using signatures to detect worms pose little danger to the zero day attacks. The focus of malware research is shifting from using signature patterns to identifying the malicious behavior displayed by the malwares. This paper presents a novel idea of extracting variable length instruction sequences that can identify worms from clean programs using data mining techniques. The analysis is facilitated by the program control flow information contained in the instruction sequences. Based upon general statistics gathered from these instruction sequences we formulated the problem as a binary classification problem and built tree based classifiers including decision tree, bagging and random forest. Our approach showed 95.6% detection rate on novel worms whose data was not used in the model building process.

  3. The self-organizing worm algorithm

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A new multi-modal optimization algorithm called the self-organizing worm algorithm (SOWA) is presented for optimization of multi-modal functions.The main idea of this algorithm can be described as follows:disperse some worms equably in the domain;the worms exchange the information each other and creep toward the nearest high point;at last they will stop on the nearest high point.All peaks of multi-modal function can be found rapidly through studying and chasing among the worms.In contrast with the classical multi-modal optimization algorithms,SOWA is provided with a simple calculation,strong convergence,high precision,and does not need any prior knowledge.Several simulation experiments for SOWA are performed,and the complexity of SOWA is analyzed amply.The results show that SOWA is very effective in optimization of multi-modal functions.

  4. Do 'Early Birds' Get the Healthier Worm?

    Science.gov (United States)

    ... medlineplus.gov/news/fullstory_163902.html Do 'Early Birds' Get the Healthier Worm? Late-to-bed types ... 2017 FRIDAY, March 3, 2017 (HealthDay News) -- Early birds may have a leg up over night owls ...

  5. Scenario Based Worm Trace Pattern Identification Technique

    CERN Document Server

    Rahayu, S Siti; Shahrin, S; Zaki, Mohd M; Irda, R; Faizal, M A

    2010-01-01

    The number of malware variants is growing tremendously and the study of malware attacks on the Internet is still a demanding research domain. In this research, various logs from different OSI layer are explore to identify the traces leave on the attacker and victim logs, and the attack worm trace pattern are establish in order to reveal true attacker or victim. For the purpose of this paper, it will only concentrate on cybercrime that caused by malware network intrusion and used the traditional worm namely blaster worm variants. This research creates the concept of trace pattern by fusing the attackers and victims perspective. Therefore, the objective of this paper is to propose on attackers, victims and multistep, attacker or victim, trace patterns by combining both perspectives. These three proposed worm trace patterns can be extended into research areas in alert correlation and computer forensic investigation.

  6. Optimal design for an end face engagement worm gear with multiple worm-wheel meshing

    Science.gov (United States)

    Deng, Xingqiao; Zhu, Weibing; Chen, Yonghong; Chen, Shouan; Wang, Jinge

    2017-01-01

    To solve the problem for lacking a special mechanical transmission that could provide multiple outputs with high transmission efficiency and good lubrication in the modern industrial, a novel worm gear, named end face engagement worm gear, with multiple worm-wheel meshing is proposed for the first time. The essential parameters for the worm gear are optimized to enhance lubrication and meshing properties. Moreover, analysis of variance(ANOVA) is applied to determine the optimum levels and to determine the influence of parameters. The ANOVA results show that the novel end face engagement worm gear with multiple worm wheels provides high lubrication(the lubrication angle is more than 89°) and meshing performance(the induce normal curvature is less than 0.0002 mm-1). The interaction between center distance and roller slant distance most strongly influences the lubrication angle(contributed 51.6%), followed by the parameters of center distance(contributed 25.0%), roller slant distance(contributed 16.4%), tooth angle of gear, gear ratio, and roller radius. In addition, roller radius most strongly influences the induced normal curvature(contributed 39.4%), followed by roller slant distance(contributed 15.2%), tooth angle of the gear(contributed 9.0%), center distance, and gear ratio. The proposed worm gear helps to enrich the no-backlash high precision worm drive and the optimal design method can provide a useful reference on performance improvement of other worm gear.

  7. Design parameters for sludge reduction in an aquatic worm reactor

    NARCIS (Netherlands)

    Hendrickx, T.L.G.; Temmink, B.G.; Elissen, H.J.H.; Buisman, C.J.N.

    2010-01-01

    Reduction and compaction of biological waste sludge from waste water treatment plants (WWTPs) can be achieved with the aquatic worm Lumbriculus variegatus. In our reactor concept for a worm reactor, the worms are immobilised in a carrier material. The size of a worm reactor will therefore mainly be

  8. Research of internet worm warning system based on system identification

    Institute of Scientific and Technical Information of China (English)

    Tao ZHOU; Guanzhong DAI; Huimin YE

    2006-01-01

    The frequent explosion of Internet worms has been one of the most serious problems in cyberspace security.In this paper, by analyzing the worm's propagation model, we propose a new worm warning system based on the method of system identification, and use recursive least squares algorithm to estimate the worm's infection rate. The simulation result shows the method we adopted is an efficient way to conduct Internet worm warning.

  9. Modeling and Detection of Camouflaging Worm using IP Traceback

    Directory of Open Access Journals (Sweden)

    S Preetha

    2012-04-01

    Full Text Available Active worms pose major security threats to the Internet. This is due to the ability of active worms to propagate in an automated fashion as they continuously compromise computers on the Internet. Active worms evolve during their propagation, and thus, pose great challenges to defend against them. A new class of active worms, referred to as Camouflaging Worm (C-Worm in short. The C-Worm is different from traditional worms because of its ability to intelligently manipulate its scan traffic volume over time. Thereby, the C-Worm camouflages its propagation from existing worm detection systems based on analyzing the propagation traffic generated by worms. The characteristics of the C-Worm and conduct a comprehensive comparison between its traffic and non-worm traffic (background traffic. The two types of traffic are barely distinguishable in the time domain. However, their distinction is clear in the frequency domain, due to the recurring manipulative nature of the C-Worm. Motivated by observations, designed a novel spectrum-based scheme to detect the C-Worm. The Power Spectral Density (PSD distribution of the scan traffic volume and its corresponding Spectral Flatness Measure (SFM to distinguish the C-Worm traffic from background traffic. Using a comprehensive set of detection metrics and real-world traces as background traffic, the extensive performance evaluations on proposed spectrum-based detection scheme. The performance data clearly demonstrates that our scheme can effectively detect the C-Worm propagation. Furthermore, show the generality of spectrum-based scheme in effectively detecting not only y the C-Worm, but traditional worms as well

  10. P2P worm detection based on application identification

    Institute of Scientific and Technical Information of China (English)

    XIA Chunhe; SHI Yunping; LI Xiaojian; GAO Wei

    2007-01-01

    P2P worm exploits common vulnerabilities and spreads through peer-to-peer networks.Despite being recognized as a potential and deadly threat to the Internet recently,few relevant countermeasures are found in extant literature.Once it breaks out,a P2P worm could result in unpredictable losses.Based on propagation characteristics of the worm,this paper presents a detection method called PWD (P2P Worm Detection),which is designed based on application identification and unknown worm detection.Simulation result and LAN-environment experiment result both indicate that PWD is an effective method to detect and block P2P worms.

  11. Detection and location algorithm against local-worm

    Institute of Scientific and Technical Information of China (English)

    YANG XinYu; SHI Yi; ZHU Huidun

    2008-01-01

    The spread of the worm causes great harm to the computer network. It has recently become the focus of the network security research. This paper presents a local-worm detection algorithm by analyzing the characteristics of traffic generated by the TCP-based worm. Moreover, we adjust the worm location algorithm, aiming at the differences between the high-speed and the low-speed worm scanning methods. This adjustment can make the location algorithm detect and locate the worm based on different scanning rate. Finally, we verified the validity and efficiency of the proposed algorithm by simulating it under NS-2,

  12. Live Worms Found Amid STS-107 Debris

    Science.gov (United States)

    2003-01-01

    NASA Project Manager Fred Ahmay holds a Biological Research in Canisters (BRIC) container in which C. elegans nemotodes (round worms) were found. The container was part of a middeck experiment that was among Columbia's debris recovered in East Texas. The worms were found alive after flying on Columbia's last mission, STS-107. The experiment was designed to verify a new synthetic nutrient solution for an International Space Station 'model' specimen planned to be used extensively for ISS gene expression studies and was sponsored by the NASA Ames Research Center. For more information on STS-107, please see GRIN Columbia General Explanation

  13. Filarial worms reduce Plasmodium infectivity in mosquitoes.

    Directory of Open Access Journals (Sweden)

    Matthew T Aliota

    Full Text Available BACKGROUND: Co-occurrence of malaria and filarial worm parasites has been reported, but little is known about the interaction between filarial worm and malaria parasites with the same Anopheles vector. Herein, we present data evaluating the interaction between Wuchereria bancrofti and Anopheles punctulatus in Papua New Guinea (PNG. Our field studies in PNG demonstrated that An. punctulatus utilizes the melanization immune response as a natural mechanism of filarial worm resistance against invading W. bancrofti microfilariae. We then conducted laboratory studies utilizing the mosquitoes Armigeres subalbatus and Aedes aegypti and the parasites Brugia malayi, Brugia pahangi, Dirofilaria immitis, and Plasmodium gallinaceum to evaluate the hypothesis that immune activation and/or development by filarial worms negatively impact Plasmodium development in co-infected mosquitoes. Ar. subalbatus used in this study are natural vectors of P. gallinaceum and B. pahangi and they are naturally refractory to B. malayi (melanization-based refractoriness. METHODOLOGY/PRINCIPAL FINDINGS: Mosquitoes were dissected and Plasmodium development was analyzed six days after blood feeding on either P. gallinaceum alone or after taking a bloodmeal containing both P. gallinaceum and B. malayi or a bloodmeal containing both P. gallinaceum and B. pahangi. There was a significant reduction in the prevalence and mean intensity of Plasmodium infections in two species of mosquito that had dual infections as compared to those mosquitoes that were infected with Plasmodium alone, and was independent of whether the mosquito had a melanization immune response to the filarial worm or not. However, there was no reduction in Plasmodium development when filarial worms were present in the bloodmeal (D. immitis but midgut penetration was absent, suggesting that factors associated with penetration of the midgut by filarial worms likely are responsible for the observed reduction in malaria

  14. Modeling and analyzing of the interaction between worms and antiworms during network worm propagation

    Institute of Scientific and Technical Information of China (English)

    YANG Feng; DUAN Haixin; LI Xing

    2005-01-01

    Interaction of antiworms with a worm population of e.g. hosts of worm infected and hosts of antiworm infected must be considered as a dynamic process. This study is an attempt for the first time to understand how introduction of antiworm affects the dynamic of network worm propagation. In this paper, we create a mathematical model (SIAR model) using ordinary differential equations to describe the interaction of worms and antiworms. Although idealized, the model demonstrates how the combination of a few proposed nonlinear interaction rules between antiworms and worms is able to generate a considerable variety of different kinds of responses. Taking the Blaster and Nachi worms as an example, we give a brief analysis for designing a practical antiworm system. To the best of our knowledge, there is no model for the spread of an antiworm that employs the passive scan and the finite lifetime and we believe that this is the first attempt on understanding the interaction between worms and antiworms.

  15. Elastic mesh braided worm robot for locomotive endoscopy.

    Science.gov (United States)

    Manwell, Thomas; Vítek, Tomáš; Ranzani, Tommaso; Menciassi, Arianna; Althoefer, Kaspar; Liu, Hongbin

    2014-01-01

    This paper presents a new design of worm robot whose body is constructed using a novel crimped elastic mesh braid inspired by the earthworm. The proposed worm robot is intended for inspection within the human body via natural orifices. The design and fabrication procedure of the worm robot are given in the paper. The imitation of peristalsis, used by natural worms, is used to control the worm robot for the purpose of producing motion while causing minimal trauma to biological tissue. The forward locomotive function of the worm robot has been tested on both a flat surface and in a rubber tube. It is shown that the worm robot is capable of propagating forwards for both test conditions in a form similar to the earthworm. The test results indicate the proposed worm robot design has promising application for natural tube inspection, like the colon and the esophagus.

  16. Darknet-Based Inference of Internet Worm Temporal Characteristics

    CERN Document Server

    Wang, Qian; Chen, Chao

    2010-01-01

    Internet worm attacks pose a significant threat to network security and management. In this work, we coin the term Internet worm tomography as inferring the characteristics of Internet worms from the observations of Darknet or network telescopes that monitor a routable but unused IP address space. Under the framework of Internet worm tomography, we attempt to infer Internet worm temporal behaviors, i.e., the host infection time and the worm infection sequence, and thus pinpoint patient zero or initially infected hosts. Specifically, we introduce statistical estimation techniques and propose method of moments, maximum likelihood, and linear regression estimators. We show analytically and empirically that our proposed estimators can better infer worm temporal characteristics than a naive estimator that has been used in the previous work. We also demonstrate that our estimators can be applied to worms using different scanning strategies such as random scanning and localized scanning.

  17. Facing Two Rapidly Spreading Internet Worms

    CERN Multimedia

    IT Department

    2009-01-01

    The Internet is currently facing a growing number of computer infections due to two rapidly spreading worms. The "Conficker" and "Downadup" worms have infected an estimated 1.1 million PCs in a 24-hour period, bringing the total number of infected computers to 3.5 million [1]. Via a single USB stick, these worms were also responsible for the infection of about 40 laptops at the last EGEE conference in Istanbul. In order to reduce the impact of these worms on CERN Windows computers, the Computer Security Team has suggested several preventive measures described here. Disabling the Windows AutoRun and AutoPlay Features The Computer Security Team and the IT/IS group have decided to disable the "AutoRun" and "AutoPlay" functionality on all centrally-managed Windows computers at CERN. When inserting CDs, DVDs or USB sticks into a PC, "AutoRun" and "AutoPlay" are responsible for automatically playing music or films stored on these media, or ...

  18. Sampling of general correlators in worm-algorithm based simulations

    Science.gov (United States)

    Rindlisbacher, Tobias; Åkerlund, Oscar; de Forcrand, Philippe

    2016-08-01

    Using the complex ϕ4-model as a prototype for a system which is simulated by a worm algorithm, we show that not only the charged correlator , but also more general correlators such as or , as well as condensates like , can be measured at every step of the Monte Carlo evolution of the worm instead of on closed-worm configurations only. The method generalizes straightforwardly to other systems simulated by worms, such as spin or sigma models.

  19. Sampling of General Correlators in Worm Algorithm-based Simulations

    CERN Document Server

    Rindlisbacher, Tobias; de Forcrand, Philippe

    2016-01-01

    Using the complex $\\phi^4$-model as a prototype for a system which is simulated by a (bosonic) worm algorithm, we show that not only the charged correlator $$, but also more general correlators such as $$ or $$ as well as condensates like $$ can be measured at every step of the Monte Carlo evolution of the worm instead of on closed-worm configurations only. The method generalizes straightforwardly to other systems simulated by (bosonic) worms, such as spin or sigma models.

  20. Ascariasis: challenges in the diagnosis of single worm disease.

    Science.gov (United States)

    Lakshmi, S Poongodi Alias; Palaniappan, N; Arunagiri, A

    2013-09-01

    One of the most common parasitic infections in humans is ascariasis. While most infectionsare asymptomatic, mild to moderate symptoms may occur due to migration of adult worms. The frequency of single worm infection seems to be increasing. Ascaris eggs are not found in the faeces of most cases infected with a single worm because it is an immature male or female. Diagnosis of such single worm infection is challenging.

  1. A novel extracellular gut symbiont in the marine worm Priapulus caudatus (Priapulida) reveals an alphaproteobacterial symbiont clade of the Ecdysozoa

    DEFF Research Database (Denmark)

    Kroer, Paul; Kjeldsen, Kasper Urup; Nyengaard, Jens Randel;

    2016-01-01

    Priapulus caudatus (phylum Priapulida) is a benthic marine predatory worm with a cosmopolitan distribution. In its digestive tract we detected symbiotic bacteria that were consistently present in specimens collected over eight years from three sites at the Swedish west coast. Based on their 16S r...... Tenuibacter priapulorum’. Within Rickettsiales, they form a phylogenetically well-defined, family-level clade with uncultured symbionts of marine, terrestrial, and freshwater arthropods. Cand. Tenuibacter priapulorum expands the host range of this candidate family from Arthropoda to the entire Ecdysozoa...

  2. American Samoa ESI: BENTHIC (Benthic Marine Habitat Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for benthic habitats in American Samoa. Vector polygons in this data set represent the distribution of...

  3. NEPR Benthic Habitat Map 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This benthic habitat map was created from a semi-automated habitat mapping process, using a combination of bathymetry, satellite imagery, aerial imagery and...

  4. National Benthic Infaunal Database (NBID)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NBID is a quantitative database on abundances of individual benthic species by sample and study region, along with other synoptically measured environmental...

  5. Benthic fauna of mangrove environment

    Digital Repository Service at National Institute of Oceanography (India)

    Parulekar, A.H.

    The distribution, abundance and importance of benthic fauna in a mangrove environment has been discussed. This ecosystem is enriched with terrestrial, aquatic, marshy and mudflat species mangrove environment. Qualitative and quantitative...

  6. Intraocular live male filarial Loa loa worm

    Directory of Open Access Journals (Sweden)

    André Omgbwa Eballe

    2009-02-01

    Full Text Available André Omgbwa Eballe1, Emillienne Epée2, Godefroy Koki2, Didier Owono2, Côme Ebana Mvogo2, Assumpta Lucienne Bella21Gynaeco Obstetric and Paediatric Hospital of Yaoundé, Yaoundé, Cameroon; 2Faculty of Medicine and Biomedical Sciences, University of Yaoundé, Yaoundé, CameroonAbstract: We report a case of Loa loa filariasis in an 8-month-old child who presented with a 3-month history of irritated acute red eye and insomnia. Examination revealed a living and active adult Loa loa worm in the anterior chamber of the left eye. The worm was extracted under general anesthetic.Keywords: Loa loa, red eye, Cameroon

  7. Worms,Your Unlikely Allies etc

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    Back in the Stone Age,humans had to put up with all sorts of creepy crawlies.Parasites - organisms that live on or in another organism - lingered inside our bodies,living off of our blood.Because internal parasites go mostly unnoticed,they were able to keep living with humans.People can survive a long time with tiny parasitic worms in their intestines.

  8. Parametric Analysis of the End Face Engagement Worm Gear

    Institute of Scientific and Technical Information of China (English)

    DENG Xingqiao; WANG Jueling; WANG Jinge; CHEN Shouan; YANG Jie

    2015-01-01

    A novel specific type of worm drive, so-called end face engagement worm gear(EFEWD), is originally presented to minimize or overcome the gear backlash. Different factors, including the three different types, contact curves, tooth profile, lubrication angle and the induced normal curvature are taken into account to investigate the meshing characteristics and create the profile of a novel specific type of worm drive through mathematical models and theoretical analysis. The tooth of the worm wheel is very specific with the sine-shaped tooth which is located at the alveolus of the worm and the tooth profile of a worm is generated by the meshing movement of the worm wheel with the sine-shaped tooth, but just the end face of the worm(with three different typical meshing types) is adapted to meshing, and therefore an extraordinary manufacturing methods is used to generate the profile of the end face engagement worm. The research results indicates that the bearing contacts of the generated conjugate hourglass worm gear set are in line contacts, with certain advantages of no-backlash, high precision and high operating efficiency over other gears and gear systems besides the end face engagement worm gear drive may improve bearing contact, reduce the level of transmission errors and lessen the sensitivity to errors of alignment. Also, the end face engagement worm can be easily made with superior meshing and lubrication performance compared with the conventional techniques. In particular, the meshing and lubrication performance of the end face engagement worm gear by using the end face to meshing can be increased over 10% and 7%, respectively. This investigate is expect to provide a new insight on the design of the future no-backlash worm drive for industry.

  9. WormBook: the online review of Caenorhabditis elegans biology.

    Science.gov (United States)

    Girard, Lisa R; Fiedler, Tristan J; Harris, Todd W; Carvalho, Felicia; Antoshechkin, Igor; Han, Michael; Sternberg, Paul W; Stein, Lincoln D; Chalfie, Martin

    2007-01-01

    WormBook (www.wormbook.org) is an open-access, online collection of original, peer-reviewed chapters on the biology of Caenorhabditis elegans and related nematodes. Since WormBook was launched in June 2005 with 12 chapters, it has grown to over 100 chapters, covering nearly every aspect of C.elegans research, from Cell Biology and Neurobiology to Evolution and Ecology. WormBook also serves as the text companion to WormBase, the C.elegans model organism database. Objects such as genes, proteins and cells are linked to the relevant pages in WormBase, providing easily accessible background information. Additionally, WormBook chapters contain links to other relevant topics in WormBook, and the in-text citations are linked to their abstracts in PubMed and full-text references, if available. Since WormBook is online, its chapters are able to contain movies and complex images that would not be possible in a print version. WormBook is designed to keep up with the rapid pace of discovery in the field of C.elegans research and continues to grow. WormBook represents a generic publishing infrastructure that is easily adaptable to other research communities to facilitate the dissemination of knowledge in the field.

  10. Bioaccumulation of isocarbophos enantiomers from laboratory-contaminated aquatic environment by tubificid worms.

    Science.gov (United States)

    Liu, Tiantian; Diao, Jinling; Di, Shanshan; Zhou, Zhiqiang

    2015-04-01

    The benthic fauna is of great importance to assess the environmental fate of contaminations in aquatic ecosystem. In this study, tubificids were exposed to both laboratory-contaminated aqueous phases and spiked sediment to study the bioaccumulation of isocarbophos (ICP). Two types of spiked sediments were used in the spiked sediment experiment. During the exposure period, an enantioselective bioaccumulation was found in spiked water treatment, with concentrations of the (-)-ICP higher than that of the (+)-ICP, but no enantioselectivity was detected in the spiked sediment treatments. However, different bioaccumulation patterns were observed in the two spiked sediment treatments. Results showed that for spiked forest field sediment (FF sediment) incubation, bioaccumulation was governed by the concentrations in soil. Whereas ICP was bioaccumulated dominantly from overlying water in spiked Chagan Lake sediment (CG sediment) test. The dissipation rates were proved different in the two sediments and ICP dissipated much faster in CG sediment than that in FF sediment. Significant difference in ICP's half-life was also observed between worm-present and worm-free treatments in FF sediment. The detections of concentrations in overlying water indicated that much more ICP diffused to aquatic phase with the present of tubificids.

  11. Antarctic Porifera database from the Spanish benthic expeditions

    Directory of Open Access Journals (Sweden)

    Pilar Rios

    2014-04-01

    Full Text Available The information about the sponges in this dataset is derived from the samples collected during five Spanish Antarctic expeditions: Bentart 94, Bentart 95, Gebrap 96, Ciemar 99/00 and Bentart 2003. Samples were collected in the Antarctic Peninsula and Bellingshausen Sea at depths ranging from 4 to 2044 m using va­rious sampling gears.The Antarctic Porifera database from the Spanish benthic expeditions is unique as it provides in­formation for an under-explored region of the Southern Ocean (Bellingshausen Sea. It fills an information gap on Antarctic deep-sea sponges, for which there were previously very few data.This phylum is an important part of the Antarctic biota and plays a key role in the structure of the Antarctic marine benthic community due to its considerable diversity and predominance in different areas. It is often a dominant component of Southern Ocean benthic communities.The quality of the data was controlled very thoroughly with GPS systems onboard the R/V Hesperides and by checking the data against the World Porifera Database (which is part of the World Register of Marine Species, WoRMS. The data are therefore fit for completing checklists, inclusion in biodivers­ity pattern analysis and niche modelling. The authors can be contacted if any additional information is needed before carrying out detailed biodiversity or biogeographic studies.The dataset currently contains 767 occurrence data items that have been checked for systematic reliability. This database is not yet complete and the collection is growing. Specimens are stored in the author’s collection at the Spanish Institute of Oceanography (IEO in the city of Gijón (Spain. The data are available in GBIF.

  12. Running worms: C. elegans self-sorting by electrotaxis.

    Directory of Open Access Journals (Sweden)

    Xavier Manière

    Full Text Available The nematode C. elegans displays complex dynamical behaviors that are commonly used to identify relevant phenotypes. Although its maintenance is straightforward, sorting large populations of worms when looking for a behavioral phenotype is difficult, time consuming and hardly quantitative when done manually. Interestingly, when submitted to a moderate electric field, worms move steadily along straight trajectories. Here, we report an inexpensive method to measure worms crawling velocities and sort them within a few minutes by taking advantage of their electrotactic skills. This method allows to quantitatively measure the effect of mutations and aging on worm's crawling velocity. We also show that worms with different locomotory phenotypes can be spatially sorted, fast worms traveling away from slow ones. Group of nematodes with comparable locomotory fitness could then be isolated for further analysis. C. elegans is a growing model for neurodegenerative diseases and using electrotaxis for self-sorting can improve the high-throughput search of therapeutic bio-molecules.

  13. NSME: a framework for network worm modeling and simulation

    OpenAIRE

    Lin, Siming; Cheng, Xueqi

    2006-01-01

    Various worms have a devastating impact on Internet. Packet level network modeling and simulation has become an approach to find effective countermeasures against worm threat. However, current alternatives are not fit enough for this purpose. For instance, they mostly focus on the details of lower layers of the network so that the abstraction of application layer is very coarse. In our work, we propose a formal description of network and worm models, and define network virtualization level...

  14. Worms Eat My Garbage. How To Set Up and Maintain a Worm Composting System. First Edition.

    Science.gov (United States)

    Appelhof, Mary

    This book is a resource for parents and teachers who want to teach about recycling and composting by setting up and maintaining a worm composting system. It is designed to be a detailed yet simple manual of vermicomposting. The manual covers the basics of vermicomposting and answers such questions as where to store a composting container, what…

  15. Viability of microcomputed tomography to study tropical marine worm galleries in humid muddy sediments

    Energy Technology Data Exchange (ETDEWEB)

    Pennafirme, Simone F., E-mail: sipennafirme@gmail.com [Universidade Federal Fluminense (UFF), Niteroi, RJ (Brazil). Inst. de Biologia. Dept. de Biologia Marinha; Machado, Alessandra S.; Lima, Inaya; Suzuki, Katia N.; Lopes, Ricardo T., E-mail: machado@lin.ufrj.br, E-mail: inaya@lin.ufrj.br, E-mail: norisuzuki6@yahoo.com.br, E-mail: ricardo@lin.ufj.br [Coordenacao dos Programas de Pos-Graduacao em Engenharia (COPPE/UFRJ), RJ (Brazil). Lab. de Instrumentacao Nuclear

    2013-07-01

    Bioturbation is an ecological process driven by organisms, which transports nutrients and gases from air/water to sediment through their galleries, by the time they feed, burrow and/or construct galleries. This exchange is vital to the maintenance of micro and macrobenthic organisms, mainly in muddy flat environments. Species with distinct galleries could create levels of bioturbation, affecting the benthic interactions. In this sense, it is fundamental developing a non-destructive method that permits identifying/quantifying the properties of these galleries. The recent advances in micro-computed tomography are allowing the high resolution 3D images generation. However, once muddy sediments are rich in organic matter and interstitial water, these would lead to motion artifacts which could, in turn, decrease the accuracy of galleries identification/quantification. In this context, the aim of this study was to develop a protocol which combines laboratory experiments and microtomography analysis in order to generate accurate 3D images of the small marine worm's galleries within humid muddy sediments. The sediment was collected at both muddy flats of Surui's and Itaipu lagoon's mangroves (RJ-Brazil), sieved (0.5mm mesh) and introduced with one individual of the marine worm Laeonereis acuta (Nereididae, Polychaeta) in each acrylic corer holders (4.4cm of internal diameter). High energy microtomography scanner was used to obtain 3D images and the setup calibration was 130 kV and 61 mA. Each acquisition image time was among 4h and 6h. Several procedures of drying remained water inside the cores were performed aiming obtaining images without movement artifacts due to circulating water, and this issue was one of the main studied parameter. In order to investigate possible chemical effects, 2ml of formalin (35%) with menthol were added to the surface of the cores. The results show that although the drying time was appropriated, the chemicals created bubbles

  16. Sampling of general correlators in worm-algorithm based simulations

    Directory of Open Access Journals (Sweden)

    Tobias Rindlisbacher

    2016-08-01

    Full Text Available Using the complex ϕ4-model as a prototype for a system which is simulated by a worm algorithm, we show that not only the charged correlator 〈ϕ⁎(xϕ(y〉, but also more general correlators such as 〈|ϕ(x||ϕ(y|〉 or 〈arg⁡(ϕ(xarg⁡(ϕ(y〉, as well as condensates like 〈|ϕ|〉, can be measured at every step of the Monte Carlo evolution of the worm instead of on closed-worm configurations only. The method generalizes straightforwardly to other systems simulated by worms, such as spin or sigma models.

  17. PCB-induced changes of a benthic community and expected ecosystem recovery following in situ sorbent amendment

    Science.gov (United States)

    Janssen, Elisabeth M.-L.; Thompson, Janet K.; Luoma, Samuel N.; Luthy, Richard G.

    2011-01-01

    The benthic community was analyzed to evaluate pollution-induced changes for the polychlorinated biphenyl (PCB)-contaminated site at Hunters Point (HP) relative to 30 reference sites in San Francisco Bay, California, USA. An analysis based on functional traits of feeding, reproduction, and position in the sediment shows that HP is depauperate in deposit feeders, subsurface carnivores, and species with no protective barrier. Sediment chemistry analysis shows that PCBs are the major risk drivers at HP (1,570 ppb) and that the reference sites contain very low levels of PCB contamination (9 ppb). Different feeding traits support the existence of direct pathways of exposure, which can be mechanistically linked to PCB bioaccumulation by biodynamic modeling. The model shows that the deposit feeder Neanthes arenaceodentata accumulates approximately 20 times more PCBs in its lipids than the facultative deposit feeder Macoma balthica and up to 130 times more than the filter feeder Mytilus edulis. The comparison of different exposure scenarios suggests that PCB tissue concentrations at HP are two orders of magnitude higher than at the reference sites. At full scale, in situ sorbent amendment with activated carbon may reduce PCB bioaccumulation at HP by up to 85 to 90% under favorable field and treatment conditions. The modeling framework further demonstrates that such expected remedial success corresponds to exposure conditions suggested as the cleanup goal for HP. However, concentrations remain slightly higher than at the reference sites. The present study demonstrates how the remedial success of a sorbent amendment, which lowers the PCB availability, can be compared to reference conditions and traditional cleanup goals, which are commonly based on bulk sediment concentrations.

  18. Characterization of benthic communities and physical habitat in the Stanislaus, Tuolumne, and Merced Rivers, California.

    Science.gov (United States)

    Hall, Lenwood W; Killen, William D; Anderson, Ronald D

    2006-04-01

    The primary goal of this study was to characterize physical habitat and benthic communities (macroinvertebrates) in the Stanislaus, Tuolumne and Merced Rivers in California's San Joaquin Valley in 2003. These rivers have been listed as impaired water bodies (303 (d) list) by the State of California due to the presence of organophosphate (OP) insecticides chlorpyrifos and diazinon, Group A pesticides (i.e., organochlorine pesticides), mercury, or unknown toxicity. Based on 10 instream and riparian physical habitat metrics, total physical habitat scores in the Stanislaus River ranged from 124 to 188 (maximum possible total score is 200). The highest total habitat score was reported at the upstream site. Tuolumne River physical habitat scores ranged from 86 to 167. Various Tuolumne River physical habitat metrics, including total habitat score, increased from downstream to upstream in this river. Merced River physical habitat scores ranged from 121 to 170 with a significant increase in various physical habitat metrics, including total habitat score, reported from downstream to upstream. Channel flow (an instream metric) and bank stability (a riparian metric) were the most important physical habitat metrics influencing the various benthic metrics for all three rivers. Abundance measures of benthic macroinvertebrates (5,100 to 5,400 individuals) were similar among the three rivers in the San Joaquin watershed. Benthic communities in all three rivers were generally dominated by: (1) Baetidae species (mayflies) which are a component of EPT taxa generally considered sensitive to environmental degradation; (2) Chironomidae (midges) which can be either tolerant or sensitive to environmental stressors depending on the species; (3) Ephemerellidae (mayflies) which are considered sensitive to pollution stress; and (4) Naididae (aquatic worms) which are generally considered tolerant to environmental stressors. The presence of 117 taxa in the Stanislaus River, 114 taxa in the

  19. Worm plot to diagnose fit in quantile regression

    NARCIS (Netherlands)

    Buuren, S. van

    2007-01-01

    The worm plot is a series of detrended Q-Q plots, split by covariate levels. The worm plot is a diagnostic tool for visualizing how well a statistical model fits the data, for finding locations at which the fit can be improved, and for comparing the fit of different models. This paper shows how the

  20. Local structure of numerically generated worm hole spacetime.

    Science.gov (United States)

    Siino, M.

    The author investigates the evolution of the apparent horizons in a numerically gererated worm hole spacetime. The behavior of the apparent horizons is affected by the dynamics of the matter field. By using the local mass of the system, he interprets the evolution of the worm hole structure.

  1. Local Structure of Numerically Generated Worm Hole Spacetime

    CERN Document Server

    Nambu, Y; Nambu, Yasusada; Siino, Masaru

    1993-01-01

    We investigate the evolution of the apparent horizons in a numerically gererated worm hole spacetime. The behavior of the apparent horizons is affected by the dynamics of the matter field. By using the local mass of the system, we interpret the evolution of the worm hole structure. Figures are available by mail to author.

  2. Network protection against worms and cascading failures using modularity partitioning

    NARCIS (Netherlands)

    Omic, J.; Hernandez, J.M.; Van Mieghem, P.

    2010-01-01

    Communication networks are prone to virus and worms spreading and cascading failures. Recently, a number of social networking worms have spread over public Web sites. Another example is error propagation in routing tables, such as in BGP tables. The immunization and error curing applied to these sce

  3. Ole Worm-Liv og videnskabTidstavle

    DEFF Research Database (Denmark)

    2006-01-01

    hæftet indeholder syv artikler om Ole Worms liv, videnskab, museum, slægtsportrætter, antikvariske arbejder og om installationen Room One......hæftet indeholder syv artikler om Ole Worms liv, videnskab, museum, slægtsportrætter, antikvariske arbejder og om installationen Room One...

  4. Dual-worm screw compressors; Compresseurs bi-vis

    Energy Technology Data Exchange (ETDEWEB)

    Baleydier, J.P. [Bitzer France, 69 - Lyon (France)

    1997-12-31

    Low power worm-screw moto-compressors are used in any king of refrigerating machineries and more and more in air conditioning systems. This paper presents the principle of dual-screw moto-compressors: worm-screw technology, role of oil (lubrication, tightness, cooling), compression, internal pressure, power reduction, lubrication, economizer, operation, model selection and accessories. (J.S.)

  5. Can aquatic worms enhance methane production from waste activated sludge?

    Science.gov (United States)

    Serrano, Antonio; Hendrickx, Tim L G; Elissen, Hellen H J; Laarhoven, Bob; Buisman, Cees J N; Temmink, Hardy

    2016-07-01

    Although literature suggests that aquatic worms can help to enhance the methane production from excess activated sludge, clear evidence for this is missing. Therefore, anaerobic digestion tests were performed at 20 and at 30°C with sludge from a high-loaded membrane bioreactor, the aquatic worm Lumbriculus variegatus, feces from these worms and with mixtures of these substrates. A significant synergistic effect of the worms or their feces on methane production from the high-loaded sludge or on its digestion rate was not observed. However, a positive effect on low-loaded activated sludge, which generally has a lower anaerobic biodegradability, cannot be excluded. The results furthermore showed that the high-loaded sludge provides an excellent feed for L. variegatus, which is promising for concepts where worm biomass is considered a resource for technical grade products such as coatings and glues.

  6. Research and Development of P2P Worms

    Institute of Scientific and Technical Information of China (English)

    Li You; Zhi-Guang Qin

    2011-01-01

    With the development and the application of many popular peer-to-peer (P2P) systems such as eMule and BitTorrent,worms probably employ the features of these P2P networks to put them at risk.Some features,such as the local routing table and the application routing mechanism,are helpful to quickly distribute the P2P worms into the networks.This paper aims to give a comprehensive survey of P2P worms.The definition and the classification of P2P worms are discussed firstly.Then,the research and development of P2P worms, including experimental analysis,propagation modeling,and defensive approaches,are addressed and analyzed in detail.

  7. Early Cambrian sipunculan worms from southwest China.

    Science.gov (United States)

    Huang, Di-Ying; Chen, Jun-Yuan; Vannier, Jean; Saiz Salinas, J I

    2004-08-22

    We report the discovery of sipunculan worms from the Lower Cambrian Maotianshan Shale, near Kunming (southwest China). Their sipunculan identity is evidenced by the general morphology of the animals (sausage-shaped body with a slender retractable introvert and a wider trunk) and by other features, both external (e.g. perioral crown of tentacles, and hooks, papillae and wrinkle rings on the body surface) and internal (U-shaped gut, and the anus opening near the introvert-trunk junction). The three fossil forms (Archaeogolfingia caudata gen. et sp. nov., Cambrosipunculus tentaculatus gen. et sp. nov. and Cambrosipunculus sp.) have striking similarities to modern sipunculans, especially the Golfingiidae to which their evolutionary relationships are discussed. This study suggests that most typical features of extant sipunculans have undergone only limited changes since the Early Cambrian, thus indicating a possible evolutionary stasis over the past 520 Myr.

  8. How the velvet worm squirts slime

    CERN Document Server

    Concha, Andrés; Morera-Brenes, Bernal; Costa, Cristiano Sampaio; Mahadevan, L; Monge-Nájera, Julián

    2014-01-01

    The rapid squirt of a proteinaceous slime jet endows the ancient velvet worms (Onychophora) with a unique mechanism for defense from predators and for capturing prey by entangling them in a disordered web that immobilizes their target. However, to date neither qualitative nor quantitative descriptions have been provided for this unique adaptation. Here we investigate the fast oscillatory motion of the oral papillae and the exiting liquid jet that oscillates with frequencies $f\\sim 30-60$ Hz. Using anatomical images, high speed videography, theoretical analysis and a physical simulacrum we show that this fast oscillatory motion is the result of an elastohydrodynamic instability driven by the interplay between the elasticity of oral papillae and the fast unsteady flow during squirting. Our results demonstrate how passive strategies can be cleverly harnessed by organisms, while suggesting future oscillating micro-fluidic devices as well as novel ways for micro and nano fiber production using bioinspired strategi...

  9. De-worming school children and hygiene intervention.

    Science.gov (United States)

    Luong, T V

    2003-06-01

    Helminths or worm infestations refer to worms that live as parasites in the human body and are a fundamental cause of disease associated with health and nutrition problems beyond gastrointestinal tract disturbances. Globally, over 3.5 billion people are infected with intestinal worms, of which 1.47 billion are with roundworm, 1.3 billion people with hookworm and 1.05 billion with whipworm. School children aged 5 - 15 years suffer the highest infection rate and worm burden that attributes to poor sanitation and hygiene. About 400 million school-age children are infected with roundworm, whipworm and hookworm worldwide, a large proportion of whom are found in the East Asia region (Cambodia, China, Lao PDR, Thailand and Vietnam). These parasites consume nutrients from children they infect, thus retarding their physical development. They destroy tissues and organs, cause abdominal pain, diarrhoea, intestinal obstruction, anaemia, ulcers and other health problems. All of these consequences of infection can slow cognitive development and thus impair learning. De-worming school children by anthelmintic drug treatment is a curative approach for expelling the heavy worm load. However, drug therapy alone is only a short-term measure of reducing worm infection and re-infection is frequent. Control measures through improved sanitation, hygiene and de-worming are needed to prevent infection and re-infection. UNICEF has supported many governments in this (and other) regions to assist in the provision of water supply and sanitary facilities and intensive hygiene education in many schools through the Water, Environment and Sanitation (WES) programme. The UNICEF supported school sanitation and hygiene education (SSHE) programme, and other programmes, could effectively enhance behaviour change in children to break the routes of worm transmission and other waterborne diseases.

  10. The theory and practice of worm gear drives

    CERN Document Server

    Dudás, Ilés

    2005-01-01

    Worm gears are special gears that resemble screws, and can be used to drive other gears. Worm gears, enable two non-touching shafts in a machine to mesh (join) together. This publication, unique in that it combines both theoretical and practical design aspects, including the latest results of research and development, provides detailed treatment of the theory and production of worm drives, as well as the overarching subject of production geometry of helicoidal surfaces.Included are mathematical models for a number of practical applications; a description of dressing equipment r

  11. Metagenomic Analysis of Microbial Symbionts in a Gutless Worm

    Energy Technology Data Exchange (ETDEWEB)

    Woyke, Tanja; Teeling, Hanno; Ivanova, Natalia N.; Hunteman, Marcel; Richter, Michael; Gloeckner, Frank Oliver; Boeffelli, Dario; Barry, Kerrie W.; Shapiro, Harris J.; Anderson, Iain J.; Szeto, Ernest; Kyrpides, Nikos C.; Mussmann, Marc; Amann, Rudolf; Bergin, Claudia; Ruehland, Caroline; Rubin, Edward M.; Dubilier, Nicole

    2006-05-01

    Symbioses between bacteria and eukaryotes are ubiquitous, yet our understanding of the interactions driving these associations is hampered by our inability to cultivate most host-associated microbes. Here we use a metagenomic approach to describe four co-occurring symbionts from the marine oligochaete Olavius algarvensis, a worm lacking a mouth, gut and nephridia. Shotgun sequencing and metabolic pathway reconstruction revealed that the symbionts are sulphur-oxidizing and sulphate-reducing bacteria, all of which are capable of carbon fixation, thus providing the host with multiple sources of nutrition. Molecular evidence for the uptake and recycling of worm waste products by the symbionts suggests how the worm could eliminate its excretory system, an adaptation unique among annelid worms. We propose a model that describes how the versatile metabolism within this symbiotic consortium provides the host with an optimal energy supply as it shuttles between the upper oxic and lower anoxic coastal sediments that it inhabits.

  12. Basic definitions for discrete modeling of computer worms epidemics

    Directory of Open Access Journals (Sweden)

    P. Guevara

    2015-04-01

    Full Text Available The information technologies have evolved in such a way that communication between computers or hosts has become common, so much that the worldwide organization (governments and corporations depends on it; what could happen if these computers stop working for a long time is catastrophic. Unfortunately, networks are attacked by malware such as viruses and worms that could collapse the system. This has served as motivation for the formal study of computer worms and epidemics to develop strategies for prevention and protection; this is why in this paper, before analyzing epidemiological models, a set of formal definitions based on set theory and functions is proposed for describing 21 concepts used in the study of worms. These definitions provide a basis for future qualitative research on the behavior of computer worms, and quantitative for the study of their epidemiological models.

  13. Shrimp aquaculture in low salinity water feeded with worm flavor

    Directory of Open Access Journals (Sweden)

    Wenceslao Valenzuela Quiñónez

    2012-09-01

    Full Text Available Shrimp aquaculture in Sinaloa is one of the top economic enterprises, generating many jobs and earns significant incomes every year. Shrimp feed is an essential part of maintaining healthy production. In this initial approach of shrimp growth in low salinity water, were tested two formulas of animal protein composed of 40% (APL1 and 20% (APL2 worm protein, a commercial diet, and no supplementary feed. Physicochemical parameters did not have a direct influence in shrimpbehavior. After six weeks of experimentation, shrimp fed with commercial diet had a weight gain 20% higher than those feed with worm protein. There were no significantly differences between sizes with respect to 40% animal protein and 20% animal protein with the commercial diet (P  0.05. However, shrimp fed worm protein had lower mortality. The use of worm protein could be an option to maintain a high quantity of shrimp reared in low salinity waters.

  14. Social behaviour and collective motion in plant-animal worms

    OpenAIRE

    Franks, N. R.; Worley, A.; Grant, K. A. G.; A. R. Gorman; Vizard, V.; Plackett, H.; Doran, C.; Gamble, M. L.; Stumpe, M.; Sendova-Franks, A. B.

    2016-01-01

    Social behaviour may enable organisms to occupy ecological niches that would otherwise be unavailable to them. Here we test this major evolutionary principle by demonstrating self-organizing social behaviour in the plant-animal, Symsagittifera roscoffensis. These marine aceol flat worms rely for all of their nutrition on the algae within their bodies: hence their common name. We show that individual worms interact with one another to co-ordinate their movements so that even at low densities t...

  15. Discrete Modeling of the Worm Spread with Random Scanning

    Science.gov (United States)

    Uchida, Masato

    In this paper, we derive a set of discrete time difference equations that models the spreading process of computer worms such as Code-Red and Slammer, which uses a common strategy called “random scanning” to spread through the Internet. We show that the derived set of discrete time difference equations has an exact relationship with the Kermack and McKendrick susceptible-infectious-removed (SIR) model, which is known as a standard continuous time model for worm spreading.

  16. WormBase: new content and better access

    OpenAIRE

    Bieri, Tamberlyn; Blasiar, Darin; Ozersky, Philip; Antoshechkin, Igor; Bastiani, Carol; Canaran, Payan; Chan, Juancarlos; Chen, Nansheng; Chen, Wen J.; Davis, Paul; Fiedler, Tristan J.; Girard, Lisa; Han, Michael; Harris, Todd W.; Kishore, Ranjana

    2006-01-01

    WormBase (http://wormbase.org), a model organism database for Caenorhabditis elegans and other related nematodes, continues to evolve and expand. Over the past year WormBase has added new data on C.elegans, including data on classical genetics, cell biology and functional genomics; expanded the annotation of closely related nematodes with a new genome browser for Caenorhabditis remanei; and deployed new hardware for stronger performance. Several existing datasets including phenotype descripti...

  17. Contaminants, benthic communities, and bioturbation: potential for PAH mobilisation in Arctic sediments

    Energy Technology Data Exchange (ETDEWEB)

    Konovalov, D.; Renaud, P.E.; Berge, J.; Voronkov, A.Y.; Cochrane, S.K.J. [Polar Environmental Center, Tromso (Norway)

    2010-07-01

    Marine benthic fauna and biological mixing were studied in relation to sediment organic enrichment and polyaromatic hydrocarbons (PAHs) in bottom sediments of Svalbard. We investigated how organic enrichment may affect the fate and chemical composition of deposited contaminants by impacting biological reworking by faunal communities. Samples were collected near active coal mines at Barentsburg and at the mouth of Groenfjord. PAH sources in both areas were coal particles and pyrolytic compounds from coal-driven power stations. The results from a bioturbation experiment were consistent with the hypothesis that fauna enhance the vertical transport of PAHs within the sediment. Faunal community composition was similar at the two sites, with polychaete worms comprising 85% of the fauna. Abundances and taxon richness were eight and ten times higher in the organically enriched sediments near Barentsburg, and total PAH concentrations were up to three times higher in Barentsburg. Unlike expectations derived from models developed for temperate regions, organic enrichment in oligotrophic areas, such as this Arctic site, enhanced the biomass and bioturbation potential of benthic communities. Hence, new insights into the relationships among enrichment, benthic communities and the fate of contaminants must be considered in management and regulatory efforts in these areas.

  18. Development of a WormCAD using Parametric Design Approach

    Directory of Open Access Journals (Sweden)

    Olayinka Oluwole Agboola

    2016-10-01

    Full Text Available Gears as power transmission devices are capable of changing the speed, torque, and direction of a power source and are considered to be one of the most important devices used in many types of machinery owing to their durability and higher power transmission efficiency. Worm gears as a type of gear are widely used for transmitting power at high velocity ratios between non-intersecting shafts. Worm gears are very useful in machine design but its design requires a lot of design assumptions and calculations. To achieve a rapid design devoid of errors, there is need to have a customized computer program capable of designing worm gears using standardized design equations; and that is what WormCAD stands for. The software was designed using JavaScript programming language and the Node.js platform. The WormCAD was tested to be accurate, faster and convenient hence it will be a viable software to be used by worm gear designers.

  19. Social behaviour and collective motion in plant-animal worms.

    Science.gov (United States)

    Franks, Nigel R; Worley, Alan; Grant, Katherine A J; Gorman, Alice R; Vizard, Victoria; Plackett, Harriet; Doran, Carolina; Gamble, Margaret L; Stumpe, Martin C; Sendova-Franks, Ana B

    2016-02-24

    Social behaviour may enable organisms to occupy ecological niches that would otherwise be unavailable to them. Here, we test this major evolutionary principle by demonstrating self-organizing social behaviour in the plant-animal, Symsagittifera roscoffensis. These marine aceol flat worms rely for all of their nutrition on the algae within their bodies: hence their common name. We show that individual worms interact with one another to coordinate their movements so that even at low densities they begin to swim in small polarized groups and at increasing densities such flotillas turn into circular mills. We use computer simulations to: (i) determine if real worms interact socially by comparing them with virtual worms that do not interact and (ii) show that the social phase transitions of the real worms can occur based only on local interactions between and among them. We hypothesize that such social behaviour helps the worms to form the dense biofilms or mats observed on certain sun-exposed sandy beaches in the upper intertidal of the East Atlantic and to become in effect a super-organismic seaweed in a habitat where macro-algal seaweeds cannot anchor themselves. Symsagittifera roscoffensis, a model organism in many other areas in biology (including stem cell regeneration), also seems to be an ideal model for understanding how individual behaviours can lead, through collective movement, to social assemblages.

  20. Searching WormBase for information about Caenorhabditis elegans.

    Science.gov (United States)

    Schwarz, Erich M; Sternberg, Paul W

    2006-07-01

    WormBase is the major public biological database for the nematode Caenorhabditis elegans. It is meant to be useful to any biologist who wants to use C. elegans, whatever his or her specialty. WormBase contains information about the genomic sequence of C. elegans, its genes and their products, and its higher-level traits such as gene expression patterns and neuronal connectivity. WormBase also contains genomic sequences and gene structures of C. briggsae and C. remanei, two closely related worms. These data are interconnected, so that a search beginning with one object (such as a gene) can be directed to related objects of a different type (e.g., the DNA sequence of the gene or the cells in which the gene is active). One can also perform searches for complex data sets. The WormBase developers group actively invites suggestions for improvements from the database users. WormBase's source code and underlying database are freely available for local installation and modification.

  1. Bacterial Microbiota Associated with the Glacier Ice Worm Is Dominated by Both Worm-Specific and Glacier-Derived Facultative Lineages

    Science.gov (United States)

    Murakami, Takumi; Segawa, Takahiro; Dial, Roman; Takeuchi, Nozomu; Kohshima, Shiro; Hongoh, Yuichi

    2017-01-01

    The community structure of bacteria associated with the glacier ice worm Mesenchytraeus solifugus was analyzed by amplicon sequencing of 16S rRNA genes and their transcripts. Ice worms were collected from two distinct glaciers in Alaska, Harding Icefield and Byron Glacier, and glacier surfaces were also sampled for comparison. Marked differences were observed in bacterial community structures between the ice worm and glacier surface samples. Several bacterial phylotypes were detected almost exclusively in the ice worms, and these bacteria were phylogenetically affiliated with either animal-associated lineages or, interestingly, clades mostly consisting of glacier-indigenous species. The former included bacteria that belong to Mollicutes, Chlamydiae, Rickettsiales, and Lachnospiraceae, while the latter included Arcicella and Herminiimonas phylotypes. Among these bacteria enriched in ice worm samples, Mollicutes, Arcicella, and Herminiimonas phylotypes were abundantly and consistently detected in the ice worm samples; these phylotypes constituted the core microbiota associated with the ice worm. A fluorescence in situ hybridization analysis showed that Arcicella cells specifically colonized the epidermis of the ice worms. Other bacterial phylotypes detected in the ice worm samples were also abundantly recovered from the respective habitat glaciers; these bacteria may be food for ice worms to digest or temporary residents. Nevertheless, some were overrepresented in the ice worm RNA samples; they may also function as facultative gut bacteria. Our results indicate that the community structure of bacteria associated with ice worms is distinct from that in the associated glacier and includes worm-specific and facultative, glacier-indigenous lineages. PMID:28302989

  2. New Geometry of Worm Face Gear Drives with Conical and Cylindrical Worms: Generation, Simulation of Meshing, and Stress Analysis

    Science.gov (United States)

    Litvin, Faydor L.; Nava, Alessandro; Fan, Qi; Fuentes, Alfonso

    2002-01-01

    New geometry of face worm gear drives with conical and cylindrical worms is proposed. The generation of the face worm-gear is based on application of a tilted head-cutter (grinding tool) instead of application of a hob applied at present. The generation of a conjugated worm is based on application of a tilted head-cutter (grinding tool) as well. The bearing contact of the gear drive is localized and is oriented longitudinally. A predesigned parabolic function of transmission errors for reduction of noise and vibration is provided. The stress analysis of the gear drive is performed using a three-dimensional finite element analysis. The contacting model is automatically generated. The developed theory is illustrated with numerical examples.

  3. Mosquito infection responses to developing filarial worms.

    Directory of Open Access Journals (Sweden)

    Sara M Erickson

    Full Text Available Human lymphatic filariasis is a mosquito-vectored disease caused by the nematode parasites Wuchereria bancrofti, Brugia malayi and Brugia timori. These are relatively large roundworms that can cause considerable damage in compatible mosquito vectors. In order to assess how mosquitoes respond to infection in compatible mosquito-filarial worm associations, microarray analysis was used to evaluate transcriptome changes in Aedes aegypti at various times during B. malayi development. Changes in transcript abundance in response to the different stages of B. malayi infection were diverse. At the early stages of midgut and thoracic muscle cell penetration, a greater number of genes were repressed compared to those that were induced (20 vs. 8. The non-feeding, intracellular first-stage larvae elicited few differences, with 4 transcripts showing an increased and 9 a decreased abundance relative to controls. Several cecropin transcripts increased in abundance after parasites molted to second-stage larvae. However, the greatest number of transcripts changed in abundance after larvae molted to third-stage larvae and migrated to the head and proboscis (120 induced, 38 repressed, including a large number of putative, immunity-related genes (approximately 13% of genes with predicted functions. To test whether the innate immune system of mosquitoes was capable of modulating permissiveness to the parasite, we activated the Toll and Imd pathway controlled rel family transcription factors Rel1 and Rel2 (by RNA interference knockdown of the pathway's negative regulators Cactus and Caspar during the early stages of infection with B. malayi. The activation of either of these immune signaling pathways, or knockdown of the Toll pathway, did not affect B. malayi in Ae. aegypti. The possibility of LF parasites evading mosquito immune responses during successful development is discussed.

  4. Mechanisms of temporary adhesion in benthic animals

    NARCIS (Netherlands)

    Dodou, D.; Breedveld, P.; Winter, J.C.F.; Dankelman, J.; Leeuwen, van J.L.

    2011-01-01

    Adhesive systems are ubiquitous in benthic animals and play a key role in diverse functions such as locomotion, food capture, mating, burrow building, and defence. For benthic animals that release adhesives, surface and material properties and external morphology have received little attention compa

  5. MULTI-AGENT SYSTEM FOR WORM DETECTION AND CONTAINMENT IN METROPOLITAN AREA NETWORKS

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Active worms can cause widespread damages at so high a speed that effectively precludes human-directed reaction, and patches for the worms are always available after the damages have been caused, whichhas elevated them selfto a first-class security threat to Metropolitan Area Networks (MAN). Multi-agent sys-tem for Worm Detection and Containment in MAN (MWDCM) is presented to provide a first-class auto-matic reaction mechanism that automatically applies containment strategies to block the propagation of theworms and to protect MAN against worm scan that wastes a lot of network bandwidth and crashes therouters. Its user agent is used to detect the known worms. Worm detection agent and worm detection correla-tion agent use two-stage based decision method to detect unknown worms. They adaptively study the access-ing in the whole network and dynamically change the working parameters to detect the unknown worms.MWDCM confines worm infection within a macro-cell or a micro-cell of the metropolitan area networks, therest of the accesses and hosts continue functioning without disruption. MWDCM integrates Worm DetectionSystem (WDS) and network management system. Reaction measures can be taken by using Simple NetworkManagement Protocol (SNMP) interface to control broadband access server as soon as the WDS detect theactive worm. MWDCM is very effective in blocking random scanning worms. Simulation results indicatethat high worm infection rate of epidemics can be avoided to a degree by MWDCM blocking the propagationof the worms.

  6. Refleksion - Worms kabinet og renæssancen

    DEFF Research Database (Denmark)

    Teglhus, Hanne

    2006-01-01

    Udstilling om Ole Worms liv og videnskab. Ole Worm var læge og videnskabsmand i renæssancen. Ud over at være medicinsk professor ved Københavns Universitet interesserede han sig indgående for Danmarks fortidsminder og runeskrift. Ole Worm skabte sit eget museum, det såkaldte  Museum Wormianum, som...... alt indhold. Ikke med originale genstande, men med dyr, sten, metal og artefakter, der kom så tæt på det originale som muligt.  Denne installation samt portrætgalleriet af Ole Worms forfædre og efterkommere udgør udstillingens hovedelementer. Dertil kommer eksempler på de naturobjekter, der indgik i hans...... medicinske behandlinger og et udvalg af Ole Worms originale videnskabelige publikationer. Til udstillingen er opbygget et moderne "skab dit eget museum" til brug for de besøgendes egne medbragte genstande, som de opfordres til at forsøge at systematisere og udstille efter behag....

  7. Research on the Propagation Models and Defense Techniques of Internet Worms

    Institute of Scientific and Technical Information of China (English)

    Tian-Yun Huang

    2008-01-01

    Internet worm is harmful to network security, and it has become a research hotspot in recent years. A thorough survey on the propagation models and defense techniques of Internet worm is made in this paper. We first give its strict definition and discuss the working mechanism. We then analyze and compare some repre sentative worm propagation models proposed in recent years, such as K-M model, two-factor model, worm-anti worm model (WAW), firewall-based model, quarantine based model and hybrid benign worm-based model, etc. Some typical defense techniques such as virtual honeypot, active worm prevention and agent-oriented worm defense, etc, are also discussed. The future direction of the worm defense system is pointed out.

  8. Continuous-time quantum Monte Carlo using worm sampling

    Science.gov (United States)

    Gunacker, P.; Wallerberger, M.; Gull, E.; Hausoel, A.; Sangiovanni, G.; Held, K.

    2015-10-01

    We present a worm sampling method for calculating one- and two-particle Green's functions using continuous-time quantum Monte Carlo simulations in the hybridization expansion (CT-HYB). Instead of measuring Green's functions by removing hybridization lines from partition function configurations, as in conventional CT-HYB, the worm algorithm directly samples the Green's function. We show that worm sampling is necessary to obtain general two-particle Green's functions which are not of density-density type and that it improves the sampling efficiency when approaching the atomic limit. Such two-particle Green's functions are needed to compute off-diagonal elements of susceptibilities and occur in diagrammatic extensions of the dynamical mean-field theory and in efficient estimators for the single-particle self-energy.

  9. Logistics of Guinea worm disease eradication in South Sudan.

    Science.gov (United States)

    Jones, Alexander H; Becknell, Steven; Withers, P Craig; Ruiz-Tiben, Ernesto; Hopkins, Donald R; Stobbelaar, David; Makoy, Samuel Yibi

    2014-03-01

    From 2006 to 2012, the South Sudan Guinea Worm Eradication Program reduced new Guinea worm disease (dracunculiasis) cases by over 90%, despite substantial programmatic challenges. Program logistics have played a key role in program achievements to date. The program uses disease surveillance and program performance data and integrated technical-logistical staffing to maintain flexible and effective logistical support for active community-based surveillance and intervention delivery in thousands of remote communities. Lessons learned from logistical design and management can resonate across similar complex surveillance and public health intervention delivery programs, such as mass drug administration for the control of neglected tropical diseases and other disease eradication programs. Logistical challenges in various public health scenarios and the pivotal contribution of logistics to Guinea worm case reductions in South Sudan underscore the need for additional inquiry into the role of logistics in public health programming in low-income countries.

  10. Ascaris lumbricoides: reinfection in children bearing an established worm burden

    Directory of Open Access Journals (Sweden)

    Fausto E. Lima Pereira

    1991-12-01

    Full Text Available To clarify the existance of reinfection in children bearing an established Ascaris lumbricoides infection, the authors evaluated the weight and the length of worms collected from ten cases of ascaridiasis. The worm burden was greater than 27 worms in nine cases. In seven cases the weight and the length of worms showed little variation, with unimodal distribution of values, suggesting that all the worms in each case belong to the same population, originated from a single brood infection or from successive infections over small time intervals. In three cases there was great variation in worm size indicated by the different values for the means and medians and by the high values for the standard deviation and coefficient of variation. In these three cases there was a bimodal distribution of worm's size suggesting the coexistance of two distinct populations: one, less numerous, composed of mature worms and the other, more numerous, composed ofimmature worms, in two cases, and two distinct populations of immature worms in one case. The existance of worms in different stages of maturation indicates that the less mature population was acquired when the mature worms were established in the gut. These results indicate that the reinfection with Ascaris in children bearing an established infection is not rare and resistance induced by a preexisting infection is not the rule.Para tentar esclarecer a existência de reinfecção em crianças portadoras de ascaridíase já estabelecida, foram avaliados o peso e o comprimento dos vermes colhidos em 10 casosde ascaridíase, em nove dos quais a carga parasitária foi maior do que 27 vermes. Em sete casos o peso e o comprimento dos vermes apresentaram pouca variação, com distribuição unimodal dos valores, sugerindo assim pertencerem todos a uma mesma população originada de uma única infecção ou de infecções repetidas com intervalos muito curtos. Em três casos, o peso e o comprimento dos vermes

  11. Commwarrior worm propagation model for smart phone networks

    Institute of Scientific and Technical Information of China (English)

    XIA Wei; LI Zhao-hui; CHEN Zeng-qiang; YUAN Zhu-zhi

    2008-01-01

    Commwarrior worm is capable of spreading through both Bluetooth and multimedia messaging service (MMS) in smart phone networks. According to the propagation characteristics of Bluetooth and MMS, we built the susceptible- exposed-infected-recovered-dormancy (SEIRD) model for the Bluetooth and MMS hybrid spread mode and performed the stability analysis. The simulation results show good correlation with our theoretical analysis and demonstrate the effectiveness of this dynamic propagation model. On the basis of the SEIRD model, we further discuss at length the influence of the propagation parameters such as user gather density in groups, moving velocity of smart phone, the time for worm to replicate itself, and other interrelated parameters on the propagation of the virus. On the basis of these analytical and simulation results, some feasible control strategies will be proposed to restrain the spread of mobile worm such as commwarrior on smart phone network.

  12. Preparation of Pickering double emulsions using block copolymer worms.

    Science.gov (United States)

    Thompson, Kate L; Mable, Charlotte J; Lane, Jacob A; Derry, Mathew J; Fielding, Lee A; Armes, Steven P

    2015-04-14

    The rational formulation of Pickering double emulsions is described using a judicious combination of hydrophilic and hydrophobic block copolymer worms as highly anisotropic emulsifiers. More specifically, RAFT dispersion polymerization was utilized to prepare poly(lauryl methacrylate)-poly(benzyl methacrylate) worms at 20% w/w solids in n-dodecane and poly(glycerol monomethacrylate)-poly(2-hydroxypropyl methacrylate)-poly(benzyl methacrylate) worms at 13% w/w solids in water by polymerization-induced self-assembly (PISA). Water-in-oil-in-water (w/o/w) double emulsions can be readily prepared with mean droplet diameters ranging from 30 to 80 μm using a two-stage approach. First, a w/o precursor emulsion comprising 25 μm aqueous droplets is prepared using the hydrophobic worms, followed by encapsulation within oil droplets stabilized by the hydrophilic worms. The double emulsion droplet diameter and number of encapsulated water droplets can be readily varied by adjusting the stirring rate employed during the second stage. For each stage, the droplet volume fraction is relatively high at 0.50. The double emulsion nature of the final formulation was confirmed by optical and fluorescence microscopy studies. Such double emulsions are highly stable to coalescence, with little or no change in droplet diameter being detected over storage at 20 °C for 10 weeks as judged by laser diffraction. Preliminary experiments indicate that the complementary o/w/o emulsions can also be prepared using the same pair of worms by changing the order of homogenization, although somewhat lower droplet volume fractions were required in this case. Finally, we demonstrate that triple and even quadruple emulsions can be formulated using these new highly anisotropic Pickering emulsifiers.

  13. [Common tropical infections with protozoans, worms and ectoparasites].

    Science.gov (United States)

    Schliemann, S

    2014-10-01

    Infectious diseases of the skin have become rarer in industrialized nations, but they still affect a considerable part of the population in tropical regions. Skin diseases induced by protozoa, worms and ectoparasites are among the 17 "neglected tropical diseases" defined by the WHO (leishmaniasis, dracunculiasis, lymphatic filariasis, onchocerciasis). Skin symptoms in travellers returning from the tropics may challenge dermatologists in Germany regarding differential diagnostic assessment and therapy. Among the 12 most frequent skin diseases in travellers are cutaneous larva migrans, leishmaniasis and myiasis. In this review, diagnosis, treatment and prevention of some the most relevant tropical dermatoses due to protozoa, worms and ectoparasites are discussed.

  14. Ascariasis-associated worm encephalopathy in a young child.

    Science.gov (United States)

    Jat, Kana Ram; Marwaha, R K; Panigrahi, Inusha; Gupta, Kunal

    2009-04-01

    Infestation with Ascaris lumbricoides in children has a varied manifestation, but encephalopathy is a very rare presentation. This report describes a case of ascariasis-associated encephalopathy in a child. An 18-month-old boy was admitted with altered sensorium. He had a history of vomiting and was passing Ascaris worms in the vomitus. The cerebrospinal fluid analysis did not reveal any abnormality. The patient was treated with an antihelminthic drug and he recovered completely. Worm encephalopathy should be considered as a differential diagnosis for unexplained encephalopathy in tropical areas.

  15. Feasibility of remote sensing benthic microalgae

    Science.gov (United States)

    Zingmark, R. G.

    1979-01-01

    Results of data analyses from multispectral scanning data are presented. The data was collected in July 1977 for concentration of chlorophyll in benthic microalgae (mainly diatoms) on an estuary mudflat.

  16. Benthic Habitats of the Florida Keys

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The benthic habitats of the Florida Keys were mapped from a series of 450 aerial photographs. Ecologists outlined the boundaries of specific habitat types by...

  17. BENTHIC MACROFAUNAL ALIENS IN WILLAPA BAY

    Science.gov (United States)

    Benthic macrofaunal samples were collected at random stations in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Z...

  18. Coastal Benthic Boundary Layer (CBBL) Research Program

    Science.gov (United States)

    1998-09-01

    Ecologic Atlas of Benthic Foraminifera of the Gulf of Mexico . Marine Science International, Woods Hole, MA, 174 p. Shiller, Alan, M., Brunner, Charlotte A...implications for the preservation of skeletal carbonates. Sedimentology, 45:39-51. Poag, C. Wylie, 1981. Ecologic Atlas of Benthic Foraminifera of the Gulf of...of the inner continental shelf. The shelf of the northeastern Gulf of Mexico is currently sediment-starved with most material deposited by the

  19. Age-related worm load and worm fecundity patterns in human populations, as indicated by schistosome circulating antigens

    Directory of Open Access Journals (Sweden)

    Polman Katja

    1998-01-01

    Full Text Available Recently, our group determined the relationship between serum CAA levels and fecal egg counts in two foci with very intense Schistosoma mansoni transmission: Maniema (Zaire, an area endemic for S. mansoni since several decades, and Ndombo (Senegal, where transmission has only been established since a few years. The objective was to study and compare age-related worm load and worm fecundity patterns in these two different endemic settings. Here, we will summarize the most important findings and conclusions of this study.

  20. Theoretical study on real tooth surface of novel toroidal worm by the forming method

    Directory of Open Access Journals (Sweden)

    Zhang Xiaoping

    2012-08-01

    Full Text Available The novel toroidal worm-gearing is a kind of worm transmission with spherical meshing elements, which is made up of worm, steel balls and worm gear, and its loading capacity and adaptability to errors can be improved by the mismatched technology applied to the meshing pair. Based on the directrix of worm surface, the mathematic model of worm surface is established, and the directrix-based forming method for machining worm surface is proposed. Further, the principle error in the machining process is analyzed, and the theoretic and real tooth surfaces of worm are fitted and compared on OpenGL platform. The results show that the tooth profile error can be controlled at the range of 0~1×10-5mm, and it is always 0 at the pressure angle.

  1. The Worm Guide: A Vericomposting Guide for Teachers.

    Science.gov (United States)

    California Integrated Waste Management Board, Sacramento.

    This guide focuses on vermicomposting of food waste. Contents include: (1) "Integrated Waste Management"; (2) "Basics of Vermicomposting"; (3) "Other Worm Bin Residents"; (4) "The Garden Connection"; (5) "Closing the Food Loop at Your School"; (6) "Fundraising"; (7) "Activities for Classroom"; and (8) "Case Studies". Appendices include educational…

  2. Making sense of genomes of parasitic worms: Tackling bioinformatic challenges.

    Science.gov (United States)

    Korhonen, Pasi K; Young, Neil D; Gasser, Robin B

    2016-01-01

    Billions of people and animals are infected with parasitic worms (helminths). Many of these worms cause diseases that have a major socioeconomic impact worldwide, and are challenging to control because existing treatment methods are often inadequate. There is, therefore, a need to work toward developing new intervention methods, built on a sound understanding of parasitic worms at molecular level, the relationships that they have with their animal hosts and/or the diseases that they cause. Decoding the genomes and transcriptomes of these parasites brings us a step closer to this goal. The key focus of this article is to critically review and discuss bioinformatic tools used for the assembly and annotation of these genomes and transcriptomes, as well as various post-genomic analyses of transcription profiles, biological pathways, synteny, phylogeny, biogeography and the prediction and prioritisation of drug target candidates. Bioinformatic pipelines implemented and established recently provide practical and efficient tools for the assembly and annotation of genomes of parasitic worms, and will be applicable to a wide range of other parasites and eukaryotic organisms. Future research will need to assess the utility of long-read sequence data sets for enhanced genomic assemblies, and develop improved algorithms for gene prediction and post-genomic analyses, to enable comprehensive systems biology explorations of parasitic organisms.

  3. A new reactor concept for sludge reduction using aquatic worms

    NARCIS (Netherlands)

    Elissen, H.J.H.; Hendrickx, T.L.G.; Temmink, B.G.; Buisman, C.J.N.

    2006-01-01

    Biological waste water treatment results in the production of waste sludge. The final treatment option in The Netherlands for this waste sludge is usually incineration. A biological approach to reduce the amount of waste sludge is through predation by aquatic worms. In this paper we test the applica

  4. The Vicious Worm - A One Health cysticercosis advocacy information tool

    DEFF Research Database (Denmark)

    Saarnak, Christopher; Trevisan, Chiara; Mejer, Helena

    The Vicious Worm: A computer-based program advocating for prevention and control of Taenia solium cysticercosis – a zoonotic tapeworm disease - widespread and emerging in many low income countries due to increased pork production and bad hygiene. Available at www.theviciousworm.org + Google Play...

  5. Structure and flexibility of worm-like micelles

    DEFF Research Database (Denmark)

    Jerke, G.; Pedersen, J.S.; Egelhaaf, S.U.

    1997-01-01

    Small-angle neutron scattering and static light scattering experiments have been performed on worm-like micelles formed by soybean lecithin and trace amounts of water in deuterated iso-octane. The structure and flexibility of the aggregates have been investigated as a function of solution...

  6. Round worm in the ear: A clinical rarity

    Directory of Open Access Journals (Sweden)

    Vidya Bhushan Rangappa

    2014-01-01

    Full Text Available Foreign body in otolaryngology practice is a common scenario. There have been very few documentations of a worm entering the ear through the Eustachian tube. We hereby report a very interesting such case and also discuss the possible cause postulated for such events.

  7. Opinion dynamics driven by leaders, media, viruses and worms

    OpenAIRE

    Tuncay, Caglar

    2006-01-01

    A model on the effects of leader, media, viruses, and worms and other agents on the opinion of individuals is developed and utilized to simulate the formation of consensus in society and price in market via excess between supply and demand. Effects of some time varying drives, (harmonic and hyperbolic) are also investigated. Key words: Opinion; Leader; Media; Market; Buyers; Sellers; Excess

  8. The Worm Process for the Ising Model is Rapidly Mixing

    Science.gov (United States)

    Collevecchio, Andrea; Garoni, Timothy M.; Hyndman, Timothy; Tokarev, Daniel

    2016-09-01

    We prove rapid mixing of the worm process for the zero-field ferromagnetic Ising model, on all finite connected graphs, and at all temperatures. As a corollary, we obtain a fully-polynomial randomized approximation scheme for the Ising susceptibility, and for a certain restriction of the two-point correlation function.

  9. Metagenomics of the Methane Ice Worm, Hesiocaeca methanicola

    Science.gov (United States)

    Goodwin, K. D.; Edsall, L.; Xin, W.; Head, S. R.; Gelbart, T.; Wood, A. M.; Gaasterland, T.

    2012-12-01

    The methane ice worm (Hesiocaeca methanicola) is a polychaete found on methane hydrate deposits for which there appears to be no publically available genomic or metagenomic data. Methane ice worms were collected in 2009 by the Johnson-Sea-Link submersible (543m depth; N 27:44.7526 W 91:13.3168). Next-generation sequencing (HiSeq2000) was applied to samples of tissue and gut contents. A subset of the assembled data (40M reads, randomly selected) was run through MG-RAST. Preliminary results for the gut content (1,269,153 sequences, average length 202 bp) indicated that 0.1% of the sequences contained ribosomal RNA genes with the majority (67%) classified as Bacteria, a relatively small per cent (1.4%) as Archae, and 31% as Eukaryota. Campylobacterales was the predominant order (14%), with unclassified (7.5%) and Desulfobacterales (4%) being the next dominant. Preliminary results for the worm tissue (2,716,461 sequences, average length 241 bp) indicated that the majority of sequences were Eukaryota (73%), with 256 sequences classified as phylum Annelida and 58% of those belonging to class Polychaeta. For the bacterial sequences obtained from the tissue samples, the predominant order was Actinomycetales (2.7%). For both the tissue and gut content samples, the majority of proteins were classified as clustering-based subsystems. This preliminary analysis will be compared to an assembly consisting of 40M of the highest quality reads.; methane ice worms on methane hydrate

  10. 蜗轮蜗杆参数化设计及运动仿真%Parametric Design and Computer Simulation of Worm Gear and Worm

    Institute of Scientific and Technical Information of China (English)

    刘其兵; 严红

    2012-01-01

    在Pro/E环境下,以蜗轮蜗杆零件的三维建模为基础,将变参设计巧妙融入到零件三维实体的创建过程中,通过生成的可视化变参对话框,实现蜗轮蜗杆的快速建模,在此基础上,对快速建模的蜗轮蜗杆进行了虚拟装配和运动仿真.%In Pro/E environment, based on the worm gear and worm 3D solid model, putting the changeable parameters design were put in the part 3D model creating procedure. The rapid modeling of worm gear and worm were realized by generating visual variable parameters dialog box. On this basis,the virtual assembly and motion simulation were made for rapid modeling of worm gear and worm.

  11. The influence of oceanographic processes on pelagic-benthic coupling in polar regions: A benthic perspective

    Science.gov (United States)

    Grebmeier, Jacqueline M.; Barry, James P.

    1991-08-01

    Benthic community abundance and biomass in polar marine systems is directly influenced by food supply from the overlying water column. Variability in hydrographic regimes, ice coverage, light, water column temperature and pelagic food web structure limit the amount of organic carbon reaching the benthos. Data from the high Arctic and Antarctic indicate that a large percentage of surface-produced organic matter is consumed by both macro- and micro-zooplankton as well as recycled in the water column via the microbial loop. This results in food-limited regimes for the underlying benthos. The few exceptions are nearshore continental shelf systems, such as in the Bering and Chukchi Seas in the western Arctic and portions of the Canadian Archipelago and Barents Sea in the eastern Arctic, where high benthic abundance and biomass occurs due to a tight coupling between water column primary production and benthic secondary production. A major difference between the Antarctic and Arctic is that the nearshore deep Antarctic is characterized by relatively high benthic abundance and biomass despite low water column production, suggesting that stability, low disturbance levels and cold temperatures enable benthic organisms to grow larger than in the Arctic. Both physical and biological disturbance levels are high in the marginal seas of the Arctic may directly influence benthic productivity. The relationship between primary production and sedimentation of organic material to the benthos is nonlinear due to its dependence on the role of the pelagic food web. Therefore, in this review we will only discuss the pelagic system with respect to how it impacts the net food supply reachig the benthos. A major objective of this review paper is demonstrate the influence of oceanographic processes on pelagic-benthic coupling in polar regions from a "bottom-up" perspective, using benthic studies from various regions in both the Arctic and Antarctic. Similarities and differences in

  12. QuantWorm: a comprehensive software package for Caenorhabditis elegans phenotypic assays.

    Directory of Open Access Journals (Sweden)

    Sang-Kyu Jung

    Full Text Available Phenotypic assays are crucial in genetics; however, traditional methods that rely on human observation are unsuitable for quantitative, large-scale experiments. Furthermore, there is an increasing need for comprehensive analyses of multiple phenotypes to provide multidimensional information. Here we developed an automated, high-throughput computer imaging system for quantifying multiple Caenorhabditis elegans phenotypes. Our imaging system is composed of a microscope equipped with a digital camera and a motorized stage connected to a computer running the QuantWorm software package. Currently, the software package contains one data acquisition module and four image analysis programs: WormLifespan, WormLocomotion, WormLength, and WormEgg. The data acquisition module collects images and videos. The WormLifespan software counts the number of moving worms by using two time-lapse images; the WormLocomotion software computes the velocity of moving worms; the WormLength software measures worm body size; and the WormEgg software counts the number of eggs. To evaluate the performance of our software, we compared the results of our software with manual measurements. We then demonstrated the application of the QuantWorm software in a drug assay and a genetic assay. Overall, the QuantWorm software provided accurate measurements at a high speed. Software source code, executable programs, and sample images are available at www.quantworm.org. Our software package has several advantages over current imaging systems for C. elegans. It is an all-in-one package for quantifying multiple phenotypes. The QuantWorm software is written in Java and its source code is freely available, so it does not require use of commercial software or libraries. It can be run on multiple platforms and easily customized to cope with new methods and requirements.

  13. Pre-stressed Modal Analysis of Worm and Worm Gear%蜗杆蜗轮有预应力的模态分析

    Institute of Scientific and Technical Information of China (English)

    刘宜敞; 田春林; 刘涛; 王晓军

    2015-01-01

    This paper takes the ordinary cylindrical worm and worm gear as the research object, which is used for transmission mechanism for automatic clutch in automobile. The three-dimensional model of the worm and worm gear is established by using SolidWorks. First of all on the worm and worm gear is static analysis, get the equivalent nephogram and the displacement nephogram of worm and worm gear. In order to prevent resonance, respectively on the worm and worm gear modal analysis is carried out by using finite element analysis software ANSYS Workbench. By modal analysis, the first 6 order natural frequency and vibration mode characteristics of worm and worm gear is gotten. From the analysis of results, resonance did not occur between the worm and worm gear. This result provides a theoretical basis for the structure improvement and later dynamic analysis of the worm and worm gear.%本文以汽车自动离合器传动机构的蜗杆和蜗轮为研究对象,运用SolidWorks建立蜗杆和蜗轮的三维模型,将模型导入到ANSYS Workbench中,再利用ANSYS Workbench有限元分析软件分别对蜗杆和蜗轮进行静力学分析,得到蜗杆和蜗轮的等效应力云图和位移云图;然后再利用ANSYS Workbench有限元分析软件分别对蜗杆和蜗轮进行模态分析,通过对模型进行模态分析,获得了蜗杆和蜗轮的前6阶固有频率和振型特征,通过结果分析,发现蜗杆和蜗轮之间不会发生共振,该结果为蜗杆和蜗轮的结构改进设计以及以后的动力学分析提供了理论依据。

  14. Hop-by-HopWorm Propagation with Carryover Epidemic Model in Mobile Sensor Networks

    Directory of Open Access Journals (Sweden)

    Jun-Won Ho

    2015-10-01

    Full Text Available In the internet, a worm is usually propagated in a random multi-hop contact manner. However, the attacker will not likely select this random multi-hop propagation approach in a mobile sensor network. This is because multi-hop worm route paths to random vulnerable targets can be often breached due to node mobility, leading to failure of fast worm spread under this strategy. Therefore, an appropriate propagation strategy is needed for mobile sensor worms. To meet this need, we discuss a hop-by-hop worm propagation model in mobile sensor networks. In a hop-by-hop worm propagation model, benign nodes are infected by worm in neighbor-to-neighbor spread manner. Since worm infection occurs in hop-by-hop contact, it is not substantially affected by a route breach incurred by node mobility. We also propose the carryover epidemic model to deal with the worm infection quota deficiency that might occur when employing an epidemic model in a mobile sensor network. We analyze worm infection capability under the carryover epidemic model. Moreover, we simulate hop-by-hop worm propagation with carryover epidemic model by using an ns-2 simulator. The simulation results demonstrate that infection quota carryovers are seldom observed where a node’s maximum speed is no less than 20 m/s.

  15. Achievements of Study Concerning Worm Face Gear Made in Romania

    Directory of Open Access Journals (Sweden)

    Vasile Boloş

    2010-12-01

    Full Text Available Worm face gears are a relatively new category of gear failure in 50 years in the USA. They are composed of a conical or cylindrical worm to engage the front wheel of a conical or flat. Geometric configuration to ensure a great contact ratio and lubrication between the flanks favorable conditions which allow their implementation of hardened steel, gray iron, bronze. Also they will produce big rapport of transmission in a single stage. Originally conceived by Illinois Tool Works Company Chicago they were taken and developed at the Institute of Mechanical Izhevsk (Russia. Experimental and theoretical developments were made in Britain, Germany, Hungary, Poland, Bulgaria and Romania. In the present paper is highlighted the concerns and the achievements of researchers from Romania in the period 1980-2009.

  16. The Opportunistic Transmission of Wireless Worms between Mobile Devices

    CERN Document Server

    Rhodes, C J

    2008-01-01

    The ubiquity of portable wireless-enabled computing and communications devices has stimulated the emergence of malicious codes (wireless worms) that are capable of spreading between spatially proximal devices. The potential exists for worms to be opportunistically transmitted between devices as they move around, so human mobility patterns will have an impact on epidemic spread. The scenario we address in this paper is proximity attacks from fleetingly in-contact wireless devices with short-range communication range, such as Bluetooth-enabled smart phones. An individual-based model of mobile devices is introduced and the effect of population characteristics and device behaviour on the outbreak dynamics is investigated. We show through extensive simulations that in the above scenario the resulting mass-action epidemic models remain applicable provided the contact rate is derived consistently from the underlying mobility model. The model gives useful analytical expressions against which more refined simulations ...

  17. Paragonimus worm from a New Guinea native in 1926

    Institute of Scientific and Technical Information of China (English)

    Wenlin Wang; David Blair; Tian Min; Fang Li; Dianhua Wang

    2011-01-01

    Objective: To reobserve and research the specimen of Paragonimus worm found in the left lung of a New Guinea native in 1926, which was previously identified as Paragonimuswestermani Kerbert or Paragonimus ringeri Cobbold. Methods: Using reconstructive software and microscopy to observe some organs of the worm, and compared with other species of paragonimus. Results: The three dimensional (3D) views of ovary and two testes of New Guinea specimen showed that the ovary was clearly divided into six lobes. These two testes were situated oppositely in the body. One teste was divided into four branches, while another was divided into five. The cuticular spines were arranged in groups over the entire skin covered in a slide, each group was consisted of two to four single spine. Conclusions: Based on 3D views and measurements, we reclassified it as Paragonimus siamensis. This was also the first report of human case infected by Paragonimus siamensis.

  18. Taxonomy Icon Data: hemichordates (Acorn worm) [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available hemichordates (Acorn worm) Glandiceps hacksi Hemichordata Glandiceps_hacksi_L.png G...landiceps_hacksi_NL.png Glandiceps_hacksi_S.png Glandiceps_hacksi_NS.png http://biosciencedbc.jp/taxonomy_icon/ico...n.cgi?i=Glandiceps+hacksi&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Glandiceps+hacksi&t=NL ...http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Glandiceps+hacksi&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Glandiceps+hacksi&t=NS ...

  19. An Improved Lower Bound for Moser's Worm Problem

    OpenAIRE

    Khandhawit, Tirasan; Sriswasdi, Sira

    2007-01-01

    We show that any convex region which contains a unit segment, an equilateral triangle of sides 1/2, and a square of side 1/3 always has area at least 0.227498. Using grid-search algorithm, we attempt to find a configuration of these three objects with minimal convex hull area. Consequently, we improve a lower bound for Moser's worm problem from 0.2194 to 0.227498.

  20. Multi-worm tracking using superposition of merit functions

    Science.gov (United States)

    Rivera, Linda Ivonne; Potsaid, Benjamin; Wen, John Ting-Yung

    2008-11-01

    Traditional solutions for long term imaging of living small biological specimens and microorganisms lack efficiency due to computationally expensive algorithms, and field of view limitations in optical microscopes. This paper describes a new algorithm that allows for real time tracking of multiple 1mm nematodes called Caenorhabditis elegans with a novel optical microscope design called the Adaptive Scanning Optical Microscope (ASOM), developed at the Center for Automation Technologies and Systems (CATS). Based on the real time experimentation, an improved algorithm to track multiple worms in the presence of entanglements is generated. The stages of this development start with an enhanced digital motion controller for the ASOM high speed scanning mirror to suppress undesired vibrations that limit the system capacity to track multiple organisms. The second phase is the integration of the ASOM apparatus, the high speed motion control, and a base tracking algorithm, all which allows for rapid image acquisition to track multiple C. elegans in real time. The base algorithm was developed at CATS and has been proven to track a single C. elegans in real time. Results demonstrating the efficacy of the complete system are presented. Lastly, an enhanced tracking algorithm is described that shows improved accuracy and robustness in tracking worms even when they become entangled. Taking into account the unique ASOM design, individual segments of the worm are tracked throughout an image sequence, and a mosaic pattern covering the entire worm is subsequently created. The algorithm takes advantage of geometric and dynamic knowledge of the C. elegans such as size, and movement patterns. The enhanced algorithm is tested on previously recorded footage. Simulated tracking experiments also illustrate the effectiveness of the enhanced algorithm and are presented.

  1. Pond aquaculture mode based lation system with Neanthes tenuistipitata on the water quality manipuglandicincta and Gracilaria%基于腺带刺沙蚕和细基江蓠调控水环境的池塘养殖模式研究

    Institute of Scientific and Technical Information of China (English)

    林更铭; 项鹏; 杨清良

    2011-01-01

    A pond ecological aquaculture mode and a water quality manipulation system were established and studied. Based on the water quality manipulation with Neanthes glandicincta and Gracilaria tenuistipitata, the healthy ecological aquaculture pond mode could be maintained. Not only did the aquaculture mode arrive at self-repairment of aquaculture environment, but also economic benefits increased notably. The concentrations of NH3-N, TN, PO43- -P, and COD in the experimental pond were much lower than that of the control pond (absent of Neanthes glandicincta and Gracilaria tenuistipitata), and decreases of 51.57%, 31.69%, 43.33% and 15.65% were seen, respectively. However, feed efficiency and the ratio of input to output were significantly reduced from 1.52 to 1.47 and from 0.57 to 0.50, respectively.%本研究构建了生态位互补的凡纳滨对虾(Litopenaeus vannamei)、黄鳍鲷(Sparus latus)、鲻鱼(Mugil cephalus)、腺带刺沙蚕(Neanthes glandicincta)和细基江蓠(Gracilaria tenuistipitata)的生态养殖模式。结果表明,腺带刺沙蚕和细基江蓠不仅能对虾池污染环境起生物修复作用,而且经济效益显著增加。实验池的营养盐和化学需氧量均明显低于未套养腺带刺沙蚕和细基江蓠的对照池,铵盐、总氮、活性磷酸盐和化学需氧量分别下降了51.57%、31.69%、43.33%和15.65%,与对照池存在极显著差异(P〈0.01);饵料系数从1.52下降到1.47,投入产出比从0.57下降到0.50。

  2. Worm Algorithm for CP(N-1) Model

    CERN Document Server

    Rindlisbacher, Tobias

    2017-01-01

    The CP(N-1) model in 2D is an interesting toy model for 4D QCD as it possesses confinement, asymptotic freedom and a non-trivial vacuum structure. Due to the lower dimensionality and the absence of fermions, the computational cost for simulating 2D CP(N-1) on the lattice is much lower than that for simulating 4D QCD. However, to our knowledge, no efficient algorithm for simulating the lattice CP(N-1) model has been tested so far, which also works at finite density. To this end we propose a new type of worm algorithm which is appropriate to simulate the lattice CP(N-1) model in a dual, flux-variables based representation, in which the introduction of a chemical potential does not give rise to any complications. In addition to the usual worm moves where a defect is just moved from one lattice site to the next, our algorithm additionally allows for worm-type moves in the internal variable space of single links, which accelerates the Monte Carlo evolution. We use our algorithm to compare the two popular CP(N-1) l...

  3. 蜗轮蜗杆参数化设计及运动仿真%Parametric Design and Simulation of Worm Gear and Worm

    Institute of Scientific and Technical Information of China (English)

    刘其兵; 严红

    2012-01-01

    In Pro/E environment, based on the worm gear and worm 3D solid molding, putting the changeable parameter design in the part 3D model creating procedure. By generating visual variable parameters dialog box, realize the rapid modeling of worm gear and worm. On this basis, finished rapid modeling of worm gear and worm of virtual assembly and motion simulation, laid the foundation for the follow - up study of the worm and worm gear.%在Pro/E环境下,以蜗轮蜗杆零件的三维建模为基础,将变参设计巧妙融入到零件三维实体的创建过程中,通过生成的可视化变参对话框,实现蜗轮蜗杆的快速建模,在此基础上,对快速建模的蜗轮蜗杆进行了虚拟装配和运动仿真,为蜗轮蜗杆机构的后续研究奠定了基础.

  4. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: South Florida: BENTHIC (Benthic Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains benthic habitats, including coral reef and hardbottom, seagrass, algae, and others in [for] South Florida. Vector polygons in the data set...

  5. Routes of uptake of diclofenac, fluoxetine, and triclosan into sediment-dwelling worms.

    Science.gov (United States)

    Karlsson, Maja V; Marshall, Stuart; Gouin, Todd; Boxall, Alistair B A

    2016-04-01

    The present study investigated the route and degree of uptake of 2 ionizable pharmaceuticals (diclofenac and fluoxetine) and 1 ionizable compound used in personal care products (triclosan) into the sediment-dwelling worm Lumbriculus variegatus. Studies were done on complete worms ("feeding") and worms where the head was absent ("nonfeeding") using (14) C-labeled ingredients. Biota sediment accumulation factors (BSAF), based on uptake of (14) C, for feeding worms increased in the order fluoxetine (0.3) triclosan (9), which is correlated with a corresponding increase in log octanol-water partition coefficient. Biota sediment accumulation factor estimates are representative of maximum values because the degree of biotransformation in the worms was not quantified. Although no significant differences were seen between the uptake of diclofenac and that of fluoxetine in feeding and nonfeeding worms, uptake of the more hydrophobic antimicrobial, triclosan, into the feeding worms was significantly greater than that in the nonfeeding worms, with the 48-h BSAF for feeding worms being 36% higher than that for the nonfeeding worms. The results imply that dietary uptake contributes to the uptake of triclosan, which may be a result of the high hydrophobicity of the compound. Models that estimate exposure of ionizable substances may need to consider uptake from both the water column and food, particularly when assessing risks from dynamic exposures to organic contaminants.

  6. Long term cultivation of larger benthic Foraminifera

    Science.gov (United States)

    Wöger, Julia; Eder, Wolfgang; Kinoshita, Shunichi; Antonino, Briguglio; Carles, Ferrandes-Cañadell; Hohenegger, Johann

    2015-04-01

    Benthic Foraminifera are used in a variety of applications employing numerous different methods, i.e. ecological monitoring, studying the effects of ocean acidification, reconstructing palaeo-bathymetry or investigating palaeo-salinity and palaeo-temperature to name only a few. To refine our understanding of ecological influences on larger benthic foraminiferal biology and to review inferences from field observations, culture experiments have become an indispensable tool. While culture experiments on smaller benthic foraminifera have become increasingly frequent in the past century, reports of the cultivation of symbiont bearing larger Foraminifera are rare. Generally, cultivation experiments can be divided into two groups: Culturing of populations and cultivation of single specimens allowing individual investigation. The latter differ form the former by several restrictions resulting from the need to limit individual motility without abridging microenvironmental conditions in the Foraminiferans artificial habitat, necessary to enable the individual to development as unfettered as possible. In this study we present first experiences and preliminary results of the long-term cultivation of larger benthic Foraminifera conducted at the 'Tropical Biosphere Research Station Sesoko Island, University of the Ryukyus', Japan, trying to reproduce natural conditions as closely as possible. Individuals of three species of larger benthic Foraminifera (Heterostegina depressa, Palaeonummulites venosus and Operculina complanata) have been cultured since April 2014. At the time of the general assembly the cultivation experiments will have been going on for more than one year, with the aim to investigate growth rates, longevities and reproduction strategies for comparison with results statistically inferred from application of the of the 'natural laboratory' method. The most important factor influencing foraminiferal health and development was found to be light intensity and light

  7. A NOVEL METHOD FOR NETWORK WORM DETECTION BASED ON WAVELET PACKET ANALYSIS

    Institute of Scientific and Technical Information of China (English)

    Liao Mingtao; Zhang Deyun; Hou Lin

    2006-01-01

    Objective To detect unknown network worm at its early propagation stage. Methods On the basis of characteristics of network worm attack, the concept of failed connection flow (FCT) was defined. Based on wavelet packet analysis of FCT time series, this method computed the energy associated with each wavelet packet of FCT time series, transformed the FCT time series into a series of energy distribution vector on frequency domain, then a trained K-nearest neighbor (KNN) classifier was applied to identify the worm. Results The experiment showed that the method could identify network worm when the worm started to scan. Compared to theoretic value, the identification error ratio was 5.69%. Conclusion The method can detect unknown network worm at its early propagation stage effectively.

  8. Isolation and Characterization of 44.6 kDa Protein from Schistosoma japonicum Male Worm

    Institute of Scientific and Technical Information of China (English)

    陈欲晓; 易新元; 曾宪芳; 袁仕善; 张顺科; LarryMCREYNOLDS

    2004-01-01

    Soluble male worm antigen of Schistosoma japonicurn (Sj) was investigated for development of new vaccine candidate. SDS--PAGE and Western blotting were performed to compare the difference between soluble antigens from worms of different sex. Mice vaccination with the testing purified protein was followed by Sj cereariae challenge to detect the protective effect against Sj. Sixteen bands were seen for the soluble male worm antigen and 12 for the female worm. In addition, a distinct band of 44.6 kDa from the male worm antigen was observed, and its antigenicity was demonstrated by Western blotting. This 44.6 kDa protein could induce significant worm and egg reduction rate in mice (39.31%, 41.98%, P < 0.001). Inthis study a 44.6 kDa protein was isolated and partially characterized. Its antigenicity, immunogenicity and the partial immune protection suggest its potential vaccine candidte against Sj.

  9. Electro-worming: The Behaviors of Caenorhabditis (C.) elegans in DC and AC Electric Fields

    CERN Document Server

    Chuang, Han-Sheng; Dabbish, Nooreen; Bau, Haim

    2010-01-01

    The video showcases how C. elegans worms respond to DC and AC electrical stimulations. Gabel et al (2007) demonstrated that in the presence of DC and low frequency AC fields, worms of stage L2 and larger propel themselves towards the cathode. Rezai et al (2010) have demonstrated that this phenomenon, dubbed electrotaxis, can be used to control the motion of worms. In the video, we reproduce Rezai's experimental results. Furthermore, we show, for the first time, that worms can be trapped with high frequency, nonuniform electric fields. We studied the effect of the electric field on the nematode as a function of field intensity and frequency and identified a range of electric field intensities and frequencies that trap worms without apparent adverse effect on their viability. Worms tethered by dielectrophoresis (DEP) avoid blue light, indicating that at least some of the nervous system functions remain unimpaired in the presence of the electric field. DEP is useful to dynamically confine nematodes for observati...

  10. A shore-based preliminary survey of marine ribbon worms (Nemertea) from the Caribbean coast of Colombia.

    Science.gov (United States)

    Gonzalez-Cueto, Jaime; Quiroga, Sigmer; Norenburg, Jon

    2014-01-01

    A checklist of benthic ribbon worm species from the Caribbean coast of Colombia is presented, including synonyms, distributions, a photographic record, and the main morphologic characters of each species for a rapid identification. This is the first research focused broadly on nemerteans in Colombia. 54 specimens of nemerteans were hand-collected from the rocky littoral of two different localities, and identified according to personal experience and specialist literature. 13 species were found; of which 11 represent new records for the country. These species belong to eight different traditionally used families: Tubulanidae, Valenciniidae, Lineidae, Amphiporidae, Cratenemertidae, Emplectonematidae, Drepanophoridae and Ototyphlonemertidae. The most common and abundant species was Dushia atra. The biodiversity of nemerteans in Colombia seems to overlap with the nemertean fauna from Florida and Brazil, explained by the convergence of the North Brazil Current, Guiana Current, Caribbean Currents and the Panama-Colombia Contracurrent in the sampled region. The results of this work suggest that the Caribbean coast of Colombia is a region with a high diversity of nemerteans, and provide important taxonomic data for environmental assessments and future biological research.

  11. The role of benthic foraminifera in the benthic nitrogen cycle of the Peruvian oxygen minimum zone

    Directory of Open Access Journals (Sweden)

    N. Glock

    2012-12-01

    Full Text Available The discovery that foraminifera are able to use nitrate instead of oxygen as energy source for their metabolism has challenged our understanding of nitrogen cycling in the ocean. It was evident before that only prokaryotes and fungi are able to denitrify. Rate estimates of foraminiferal denitrification were very sparse on a regional scale. Here, we present estimates of benthic foraminiferal denitrification rates from six stations at intermediate water depths in and below the Peruvian oxygen minimum zone (OMZ. Foraminiferal denitrification rates were calculated from abundance and assemblage composition of the total living fauna in both, surface and subsurface sediments, as well as from individual species specific denitrification rates. A comparison with total benthic denitrification rates as inferred by biogeochemical models revealed that benthic foraminifera account for the total denitrification on the shelf between 80 and 250 m water depth. They are still important denitrifiers in the centre of the OMZ around 320 m (29–56% of the benthic denitrification but play only a minor role at the lower OMZ boundary and below the OMZ between 465 and 700 m (3–7% of total benthic denitrification. Furthermore, foraminiferal denitrification was compared to the total benthic nitrate loss measured during benthic chamber experiments. Foraminiferal denitrification contributes 1 to 50% to the total nitrate loss across a depth transect from 80 to 700 m, respectively. Flux rate estimates ranged from 0.01 to 1.3 mmol m−2 d−1. Furthermore we show that the amount of nitrate stored in living benthic foraminifera (3 to 705 µmol L−1 can be higher by three orders of magnitude as compared to the ambient pore waters in near surface sediments sustaining an important nitrate reservoir in Peruvian OMZ sediments. The substantial contribution of foraminiferal nitrate respiration to total benthic nitrate loss at the Peruvian margin

  12. The role of benthic foraminifera in the benthic nitrogen cycle of the Peruvian oxygen minimum zone

    Directory of Open Access Journals (Sweden)

    N. Glock

    2013-07-01

    Full Text Available The discovery that foraminifera are able to use nitrate instead of oxygen as an electron acceptor for respiration has challenged our understanding of nitrogen cycling in the ocean. It was thought before that only prokaryotes and some fungi are able to denitrify. Rate estimates of foraminiferal denitrification have been very sparse and limited to specific regions in the oceans, not comparing stations along a transect of a certain region. Here, we present estimates of benthic foraminiferal denitrification rates from six stations at intermediate water depths in and below the Peruvian oxygen minimum zone (OMZ. Foraminiferal denitrification rates were calculated from abundance and assemblage composition of the total living fauna in both surface and subsurface sediments, as well as from individual species specific denitrification rates. A comparison with total benthic denitrification rates as inferred by biogeochemical models revealed that benthic foraminifera probably account for the total denitrification in shelf sediments between 80 and 250 m water depth. The estimations also imply that foraminifera are still important denitrifiers in the centre of the OMZ around 320 m (29–50% of the benthic denitrification, but play only a minor role at the lower OMZ boundary and below the OMZ between 465 and 700 m (2–6% of total benthic denitrification. Furthermore, foraminiferal denitrification has been compared to the total benthic nitrate loss measured during benthic chamber experiments. The estimated foraminiferal denitrification rates contribute 2 to 46% to the total nitrate loss across a depth transect from 80 to 700 m, respectively. Flux rate estimates range from 0.01 to 1.3 mmol m−2 d−1. Furthermore we show that the amount of nitrate stored in living benthic foraminifera (3 to 3955 μmol L−1 can be higher by three orders of magnitude as compared to the ambient pore waters in near-surface sediments sustaining an important nitrate reservoir in

  13. THE WORMS COMPOST - EFFECTIVE FERTILIZER FOR IMPROVING DEGRADED SOILS

    Directory of Open Access Journals (Sweden)

    Larisa CREMENEAC

    2013-01-01

    Full Text Available Management of organic waste is a difficult, complex and intractable in Moldova, according to international standards. Acute problem of organic matter from livestock sector waste is generated by storing them in unauthorized areas. Organic waste management strategies require different methods. One of them is organic waste bio conversion technology by worm’s cultivation. As the main natural wealth of the Republic of Moldova, soil requires a special care. Agriculture, in particular, should pay attention to the soil’s humus and nutrient status – and restore losses of humus and the nutrients used by crops. This requires measures to improve soil fertility. Land use provides, first of all return losses of humus and nutrients used by plants. Therefore measures required to improve soil fertility. The essence of the research was to highlight the role of worms compost improve the soil. To this end, in ETS "Maximovca" was organized an experiment that included three groups (two - experimental, to fund worms compost and one - control the natural background. Observations on soil fertility have been conducted over three years. The soil samples were collected by usual methods determined values of organic matter and humus. The results of the investigations, to determine the values of organic matter and humus samples collected from surface and depth 15 cm exceeded that of the sample control group to 29,7%; 11,4% and 34,3%; 37,1% in experimental group I and 9,3%; 11,6% and 45,5%; 45,5% in experimental group II. Therefore, worms compost embedded in a dose of 3-4 tons / ha during three years, has improved the fertility of the soil

  14. Comparative study on presentation of biliary ascariasis with dead and living worms

    Directory of Open Access Journals (Sweden)

    Alam Shahinul

    2010-01-01

    Full Text Available Background/Aim: Ascariasis is a common parasitic infestation in Asia and Latin America. The most serious presentation is biliary and pancreatic ascariasis (BPA. The aim of the present study was to compare the clinical presentation of BPA with dead worms with that with living worms. Materials and Methods: We included 138 consecutive cases of BPA that occured during the period January 2005 to July 2009. All the patients had endoscopically proven BPA consisting of living or dead worms. Comparison was done by chi-square and independent t tests. Results: The age (mean ± SD of the patients was 36.8 ± 16.1 years. Prevalence ratio between male and female patients was 1:5. Ninety eight patients contained living worms and 40 had dead worms. Males were more prone to develop dead worm BPA. The commonest presentation was biliary colic (131; 94.9%; others were acute cholangitis (30; 21.7%, obstructive jaundice (19; 13.8%, choledocholithiasis (20; 14.5%, acute pancreatitis (10; 7.2%, acute cholecystitis (6; 4.3%, liver abscess (2; 1.4%, hepatolithiasis (3; 2.2%, stricture of common bile duct (2; 1.4%, pancreatic abscess (1; 0.7% and cirrhosis of liver (1; 0.7%. Choledocholithiasis, hepatolithiasis, liver abscess and cirrhosis were associated only with dead worms. We could successfully remove all the worms with endoscopic interventions, but 5 patients required surgical intervention as there were strictures and stones within the biliary tree or Ascaris were in gallbladder. Recurrences of stone and cholangitis occurred only in those with dead worms. Conclusion: Biliary ascariasis with dead worms is more dangerous than that with living worms. Endoscopic or surgical intervention may be required repeatedly in those with dead worms.

  15. Fast Multicast on Multistage Interconnection Networks Using Multi-Head Worms

    Institute of Scientific and Technical Information of China (English)

    WANG Xiaodong; XU Ming; ZHOU Xingming

    1999-01-01

    Abstract This paper proposes a new approach forimplementing fast multicast on multistage interconnection networks (MINs)with multi-head worms. For an MIN with n stages of k×k switches,a singlemulti-head worm can cover an arbitrary set of destinations with asingle communication start-up. Compared with schemes using unicastmessages, this approach reduces multicast latency significantly andperforms better than multi-destination worms.

  16. Free-Living Tube Worm Endosymbionts Found at Deep-Sea Vents▿ †

    Science.gov (United States)

    Harmer, Tara L.; Rotjan, Randi D.; Nussbaumer, Andrea D.; Bright, Monika; Ng, Andrew W.; DeChaine, Eric G.; Cavanaugh, Colleen M.

    2008-01-01

    Recent evidence suggests that deep-sea vestimentiferan tube worms acquire their endosymbiotic bacteria from the environment each generation; thus, free-living symbionts should exist. Here, free-living tube worm symbiont phylotypes were detected in vent seawater and in biofilms at multiple deep-sea vent habitats by PCR amplification, DNA sequence analysis, and fluorescence in situ hybridization. These findings support environmental transmission as a means of symbiont acquisition for deep-sea tube worms. PMID:18408062

  17. VizieR Online Data Catalog: Galactic Worms (Koo+, 1992)

    Science.gov (United States)

    Koo, B.-C.; Heiles, C.; Reach, W. T.

    2016-02-01

    118 structures catalogued as "worm candidates" are found on the basis of the maps in HI-21cm, IRAS 100 and 60μm. The 21cm maps of the Galactic Plane (b < 10°) result from available surveys (Kerr et al. 1986A&AS...66..373K; Weaver & Williams 1973A&AS....8....1W, Cat. VIII/11) and from new observations near the Galactic center during 1989 and 1990 using the Hat Creek 26m telescope. (3 data files).

  18. Pet roundworms and hookworms: A continuing need for global worming

    Directory of Open Access Journals (Sweden)

    Traversa Donato

    2012-05-01

    Full Text Available Abstract Ascarids and ancylostomatids are the most important parasites affecting dogs and cats worldwide, in terms of diffusion and risk for animal and human health. Different misconceptions have led the general public and pet owners to minimize the importance of these intestinal worms. A low grade of interest is also registered among veterinary professions, although there is a significant merit in keeping our guard up against these parasites. This article reviews current knowledge of ascarids and ancylostomatids, with a special focus on pathogenicity, epidemiology and control methods in veterinary and human medicine.

  19. Photonic crystal fiber in the polychaete worm Pherusa sp.

    Science.gov (United States)

    Trzeciak, Tomasz M; Vukusic, Peter

    2009-12-01

    Setae of the polychaete worm Pherusa exhibit remarkably strong photonic effects, which arise from their two-dimensional-periodic internal structure of hexagonally packed cylindrical channels. The hexagonal order is limited to monocrystalline domains of different orientation, which results in an overall polycrystalline effect. A detailed experimental and theoretical investigation of this structure reveals that the internal photonic structure is carefully tuned with respect to its lattice constant in order to provide an optical response coinciding with the visible wavelength rage. A further optimization is observed for the packing fraction of cylindrical channels in order to maximize the width of photonic band gaps, and hence the reflectance of incident visible light.

  20. Cooperative Automated Worm Response and Detection Immune Algorithm

    CERN Document Server

    Kim, Jungwon; Aickelin, Uwe; McLeod, Julie

    2010-01-01

    The role of T-cells within the immune system is to confirm and assess anomalous situations and then either respond to or tolerate the source of the effect. To illustrate how these mechanisms can be harnessed to solve real-world problems, we present the blueprint of a T-cell inspired algorithm for computer security worm detection. We show how the three central T-cell processes, namely T-cell maturation, differentiation and proliferation, naturally map into this domain and further illustrate how such an algorithm fits into a complete immune inspired computer security system and framework.

  1. Complete mitochondrial genome of yellow meal worm(Tenebrio molitor)

    OpenAIRE

    Liu, Li-Na; Wang, Cheng-Ye

    2014-01-01

    The yellow meal worm(Tenebrio molitor L.) is an important resource insect typically used as animal feed additive. It is also widely used for biological research. The first complete mitochondrial genome of T. molitor was determined for the first time by long PCR and conserved primer walking approaches. The results showed that the entire mitogenome of T. molitor was 15 785 bp long, with 72.35% A+T content [deposited in GenBank with accession number KF418153]. The gene order and orientation were...

  2. Self-Propagating Worms in Wireless Sensor Networks

    DEFF Research Database (Denmark)

    Giannetsos, Thanassis; Dimitriou, Tassos; Prasad, Neeli R.

    2009-01-01

    Malicious code is defined as software designed to execute attacks on software systems. This work demonstrates the possibility of executing malware on wireless sensor nodes that are based on the von Neumann architecture. This is achieved by exploiting a buffer overflow vulnerability to smash...... the call stack, intrude a remote node over the radio channel and, eventually, completely take control of it. Then we show how the malware can be crafted to become a self-replicating worm that broadcasts itself and propagates over the network hop-by-hop, infecting all the nodes....

  3. The research on the modeling of dual-cone double enveloping hourglass worm gear pair

    Directory of Open Access Journals (Sweden)

    LI Shaoxiang

    2013-04-01

    Full Text Available Up to now there is no specialized,efficient,general-purpose modeling method of dual-cone double enveloping hourglass worm gear pair.In this paper,based on the spatial meshing theory,a parameterized mathematical model of the dual-cone double enveloping hourglass worm gear pair is established,which is simplified as a digitized modeling method based on six basic parameters of the worm gear pair.Virtual machining modeling plug-in programming is achieved through the solidworks development platform.The results show that this modeling method can make the hourglass worm modeling more convenient,accurate and fast.

  4. Lessons from bloodless worms: heme homeostasis in C. elegans.

    Science.gov (United States)

    Sinclair, Jason; Hamza, Iqbal

    2015-06-01

    Heme is an essential cofactor for proteins involved in diverse biological processes such as oxygen transport, electron transport, and microRNA processing. Free heme is hydrophobic and cytotoxic, implying that specific trafficking pathways must exist for the delivery of heme to target hemoproteins which reside in various subcellular locales. Although heme biosynthesis and catabolism have been well characterized, the pathways for trafficking heme within and between cells remain poorly understood. Caenorhabditis elegans serves as a unique animal model for uncovering these pathways because, unlike vertebrates, the worm lacks enzymes to synthesize heme and therefore is crucially dependent on dietary heme for sustenance. Using C. elegans as a genetic animal model, several novel heme trafficking molecules have been identified. Importantly, these proteins have corresponding homologs in vertebrates underscoring the power of using C. elegans, a bloodless worm, in elucidating pathways in heme homeostasis and hematology in humans. Since iron deficiency and anemia are often exacerbated by parasites such as helminths and protozoa which also rely on host heme for survival, C. elegans will be an ideal model to identify anti-parasitic drugs that target heme transport pathways unique to the parasite.

  5. Bio-inspired microfluidics: The case of the velvet worm

    Science.gov (United States)

    Concha, Andres; Mellado, Paula; Morera-Brenes, Bernal; Sampaio-Costa, Cristiano; Mahadevan, L.; Monge-Najera, Julian

    The rapid squirt of a proteinaceous slime jet endow velvet worms (Onychophora) with a unique mechanism for defense from predators and for capturing prey by entangling them in a disordered web that immobilizes their target. However, to date neither qualitative nor quantitative descriptions have been provided for this unique adaptation. We have investigated the mechanism that allows velvet worms the fast oscillatory motion of their oral papillae and the exiting liquid jet that oscillates with frequencies f ~ 30 - 60 Hz. Using anatomical images and high speed videography, we show that even without fast muscular action of the papilla, a strong contraction of the slime reservoir and the geometry of the reservoir-papilla system suffices to accelerate the slime to speeds up to v ~ 5 m /s in about Δt ~ 60 ms. A theoretical analysis and a physical simulacrum allow us to infer that this fast oscillatory motion is the result of an elastohydrodynamic instability driven by the interplay between the elasticity of oral papillae and the fast unsteady flow during squirting. We propose several applications that can be implemented using this instability, ranging from high-throughput droplet production, printing, and micro-nanofiber production among others. A.C was partially supported by Fondecyt Grant 11130075.

  6. Complete mitochondrial genome of yellow meal worm (Tenebrio molitor).

    Science.gov (United States)

    Liu, Li-Na; Wang, Cheng-Ye

    2014-11-18

    The yellow meal worm (Tenebrio molitor L.) is an important resource insect typically used as animal feed additive. It is also widely used for biological research. The first complete mitochondrial genome of T. molitor was determined for the first time by long PCR and conserved primer walking approaches. The results showed that the entire mitogenome of T. molitor was 15 785 bp long, with 72.35% A+T content [deposited in GenBank with accession number KF418153]. The gene order and orientation were the same as the most common type suggested as ancestral for insects. Two protein-coding genes used atypical start codons (CTA in ND2 and AAT in COX1), and the remaining 11 protein-coding genes started with a typical insect initiation codon ATN. All tRNAs showed standard clover-leaf structure, except for tRNA(Ser) (AGN), which lacked a dihydrouridine (DHU) arm. The newly added T. molitor mitogenome could provide information for future studies on yellow meal worm.

  7. Design and analysis of SEIQR worm propagation model in mobile internet

    Science.gov (United States)

    Xiao, Xi; Fu, Peng; Dou, Changsheng; Li, Qing; Hu, Guangwu; Xia, Shutao

    2017-02-01

    The mobile Internet has considerably facilitated daily life in recent years. However, it has become the breeding ground for lots of new worms, including the Bluetooth-based worm, the SMS/MMS-based worm and the Wi-Fi-based worm. At present, Wi-Fi is widely used for mobile devices to connect to the Internet. But it exposes these devices to the dangerous environment. Most current worm propagation models aim to solve the problems of computer worms. They cannot be used directly in the mobile environment, particularly in the Wi-Fi scenario, because of the differences between computers and mobile devices. In this paper, we propose a worm propagation model in the Wi-Fi environment, called SEIQR (Susceptible-Exposed-Infectious- Quarantined-Recovered). In the model, infected nodes can be quarantined by the Wi-Fi base station, and a new state named the Quarantined state (Q) is established to represent these infected nodes. Based on this model, we present an effective method to inhibit the spread of the Wi-Fi-based worms. Furthermore, related stabilities of the worm-free and endemic equilibriums are studied based on the basic reproduction number R0. The worm-free equilibrium is locally and globally asymptotically stable if R0 < 1, whereas the endemic equilibrium is locally asymptotically stable if R0 < 1. Finally, we evaluate the performance of our model by comprehensive experiments with different infection rates and quarantine rates. The results indicate that our mechanism can combat the worms propagated via Wi-Fi.

  8. Benthic habitat mapping using hyperspectral remote sensing

    Science.gov (United States)

    Vélez-Reyes, Miguel; Goodman, James A.; Castrodad-Carrau, Alexey; Jiménez-Rodriguez, Luis O.; Hunt, Shawn D.; Armstrong, Roy

    2006-09-01

    Benthic habitats are the different bottom environments as defined by distinct physical, geochemical, and biological characteristics. Remote sensing is increasingly being used to map and monitor the complex dynamics associated with estuarine and nearshore benthic habitats. Advantages of remote sensing technology include both the qualitative benefits derived from a visual overview, and more importantly, the quantitative abilities for systematic assessment and monitoring. Advancements in instrument capabilities and analysis methods are continuing to expand the accuracy and level of effectiveness of the resulting data products. Hyperspectral sensors in particular are rapidly emerging as a more complete solution, especially for the analysis of subsurface shallow aquatic systems. The spectral detail offered by hyperspectral instruments facilitates significant improvements in the capacity to differentiate and classify benthic habitats. This paper reviews two techniques for mapping shallow coastal ecosystems that both combine the retrieval of water optical properties with a linear unmixing model to obtain classifications of the seafloor. Example output using AVIRIS hyperspectral imagery of Kaneohe Bay, Hawaii is employed to demonstrate the application potential of the two approaches and compare their respective results.

  9. Benthic and pelagic pathways of methylmercury bioaccumulation in estuarine food webs of the northeast United States.

    Science.gov (United States)

    Chen, Celia Y; Borsuk, Mark E; Bugge, Deenie M; Hollweg, Terill; Balcom, Prentiss H; Ward, Darren M; Williams, Jason; Mason, Robert P

    2014-01-01

    Methylmercury (MeHg) is a contaminant of global concern that bioaccumulates and bioamagnifies in marine food webs. Lower trophic level fauna are important conduits of MeHg from sediment and water to estuarine and coastal fish harvested for human consumption. However, the sources and pathways of MeHg to these coastal fisheries are poorly known particularly the potential for transfer of MeHg from the sediment to biotic compartments. Across a broad gradient of human land impacts, we analyzed MeHg concentrations in food webs at ten estuarine sites in the Northeast US (from the Hackensack Meadowlands, NJ to the Gulf of Maine). MeHg concentrations in water column particulate material, but not in sediments, were predictive of MeHg concentrations in fish (killifish and Atlantic silversides). Moreover, MeHg concentrations were higher in pelagic fauna than in benthic-feeding fauna suggesting that MeHg delivery to the water column from methylation sites from within or outside of the estuary may be an important driver of MeHg bioaccumulation in estuarine pelagic food webs. In contrast, bulk sediment MeHg concentrations were only predictive of concentrations of MeHg in the infaunal worms. Our results across a broad gradient of sites demonstrate that the pathways of MeHg to lower trophic level estuarine organisms are distinctly different between benthic deposit feeders and forage fish. Thus, even in systems with contaminated sediments, transfer of MeHg into estuarine food webs maybe driven more by the efficiency of processes that determine MeHg input and bioavailability in the water column.

  10. Benthic and pelagic pathways of methylmercury bioaccumulation in estuarine food webs of the northeast United States.

    Directory of Open Access Journals (Sweden)

    Celia Y Chen

    Full Text Available Methylmercury (MeHg is a contaminant of global concern that bioaccumulates and bioamagnifies in marine food webs. Lower trophic level fauna are important conduits of MeHg from sediment and water to estuarine and coastal fish harvested for human consumption. However, the sources and pathways of MeHg to these coastal fisheries are poorly known particularly the potential for transfer of MeHg from the sediment to biotic compartments. Across a broad gradient of human land impacts, we analyzed MeHg concentrations in food webs at ten estuarine sites in the Northeast US (from the Hackensack Meadowlands, NJ to the Gulf of Maine. MeHg concentrations in water column particulate material, but not in sediments, were predictive of MeHg concentrations in fish (killifish and Atlantic silversides. Moreover, MeHg concentrations were higher in pelagic fauna than in benthic-feeding fauna suggesting that MeHg delivery to the water column from methylation sites from within or outside of the estuary may be an important driver of MeHg bioaccumulation in estuarine pelagic food webs. In contrast, bulk sediment MeHg concentrations were only predictive of concentrations of MeHg in the infaunal worms. Our results across a broad gradient of sites demonstrate that the pathways of MeHg to lower trophic level estuarine organisms are distinctly different between benthic deposit feeders and forage fish. Thus, even in systems with contaminated sediments, transfer of MeHg into estuarine food webs maybe driven more by the efficiency of processes that determine MeHg input and bioavailability in the water column.

  11. Influence of the enchytraeid worm Buchholzia appendiculata on aggregate formation and organic matter decomposition.

    NARCIS (Netherlands)

    Marinissen, J.C.Y.; Didden, W.A.M.

    1997-01-01

    Enchytraeid worms were kept in <0.3 mm sieved sandy loam subsoil mixed with ground wheat, for 6 weeks at 16°C. Sieved soil with organic matter but without worms was also incubated. The soil was then allowed to air-dry slowly during 6 weeks. Enchytraeid casts were collected from the surface of the so

  12. Performance Analysis of Cell-Phone Worm Spreading in Cellular Networks through Opportunistic Communications

    Directory of Open Access Journals (Sweden)

    YAHUI, W.

    2012-05-01

    Full Text Available Worms spreading directly between cell-phones over short-range radio (Bluetooth, WiFi, etc. are increasing rapidly. Communication by these technologies is opportunistic and has very close relation with the social characteristics of the phone carriers. In this paper, we try to evaluate the impact of different characteristics on the spreading performance of worms. On the other hand, the behaviors of worms may have certain impact, too. For example, worms may make phones be completely dysfunctional and these phones can be seen as killed. We study the impact of the killing speed. Using the Markov model, we propose some theoretical models to evaluate the spreading performance in different cases. Simulation results show the accuracy of our models. Numerical results show that if users do not believe the data coming from others easily, the worms may bring less damage. Surprisingly, if the users are more willing to install the anti-virus software, the worms may bring bigger damage when the software becomes to be outdated with high probability. Though the worms can bring big damage on the network temporarily by killing phones rapidly, numerical results show that this behavior may decrease the total damage in the long time. Therefore, killing nodes more rapidly may be not optimal for worms.

  13. Worms in the College Classroom: More than Just a Composting Demonstration

    Science.gov (United States)

    Kelley, Rebecca L.

    2010-01-01

    Although worm bins have been used by K-12 and nonformal educators for decades, there is little evidence of their use in postsecondary education. The ease of use, maintenance, affordability, portability, and diversity of scientific concepts that can be demonstrated with a worm bin make it a valuable tool in college science classrooms. The purpose…

  14. Valorization of waste streams, "From food by-products to worm biomass"

    NARCIS (Netherlands)

    Laarhoven, B.; Elissen, H.J.H.; Temmink, B.G.; Buisman, C.J.N.

    2013-01-01

    A new technology is investigated to produce a high quality animal feed source by converting safe industrial food wastes into worm biomass. The freshwater worm Lumbriculus variegatus (common name: blackworm) has been selected for this purpose. This species can be used to reduce and concentrate munici

  15. Global dynamics of a novel multi-group model for computer worms

    Institute of Scientific and Technical Information of China (English)

    Gong Yong-Wang; Song Yu-Rong; Jiang Guo-Ping

    2013-01-01

    In this paper,we study worm dynamics in computer networks composed of many autonomous systems.A novel multigroup SIQR (susceptible-infected-quarantined-removed) model is proposed for computer worms by explicitly considering anti-virus measures and the network infrastructure.Then,the basic reproduction number of worm R0 is derived and the global dynamics of the model are established.It is shown that if R0 is less than or equal to 1,the disease-free equilibrium is globally asymptotically stable and the worm dies out eventually,whereas,if R0 is greater than 1,one unique endemic equilibrium exists and it is globally asymptotically stable,thus the worm persists in the network.Finally,numerical simulations are given to illustrate the theoretical results.

  16. A Potential Approach of Internet Worm Propagation Based on P2P

    Institute of Scientific and Technical Information of China (English)

    YAO Yu; LUO Xingrui; GAO Fuxiang; YU Ge

    2006-01-01

    Various kinds of active worms have been plunging into the network flows, which make the Internet security problem more serious. Our research on a potential propagation approach of active worms, P2P-based propagation approach, is given in this paper. To measure the propagating performance of our approach, the SEI (Susceptible-Exposed- Infected) propagation model is presented. It proves that with the idea of pure P2P architecture, worms can be hidden in the early stage of propagation, and then infect most of the hosts in a shorter period. By comparing our SEI propagation model with the Simple Epidemic Model, we observe that the size of a worm is a significant parameter which can affect the propagating performance. When the size of the worm becomes large, our approach can still show an excellent propagating performance.

  17. DIRECT DIGITAL DESIGN AND SIMULATION OF MESHING IN WORM-GEAR DRIVE

    Institute of Scientific and Technical Information of China (English)

    XU Wujiao; QIN Datong; SHI Wankai

    2006-01-01

    A direct digital design method (DDDM) of worm-gear drive is proposed. It is directly based on the simulation of manufacturing process and completely different from the conventional modeling method. The loaded tooth contact analysis (LTCA) method is analyzed, in which the advanced surface to surface searching technique is included. The influence of misalignment errors and contact deformations on contact zone and transmission error (TE) is discussed. Combined modification approach on worm tooth surface is presented. By means of DDDM and LTCA, it is very convenient to verify the effect of worm-gear drive's modification approach. The analysis results show that,the modification in profile direction reduces the sensitivity of worm-gear drive to misalignment errors and the modification in longitudinal direction decreases the TE. Thus the optimization design of worm-gear drive can be achieved prior to the actual manufacturing process.

  18. Worm-like instability of a vibrated sessile drop

    CERN Document Server

    Hemmerle, Arnaud; Bergeron, Vance; Charitat, Thierry; Farago, Jean

    2016-01-01

    We study the effects of vertical sinusoidal vibrations on a liquid droplet with a low surface tension (ethanol) deposited on a solid substrate. In a precise range of amplitudes and frequencies, the drop exhibits a dramatic worm-like shape instability with a strong symmetry breaking, comparable to the one observed by Pucci et al. (Phys. Rev. Lett., 106 (2011) 024503) on a vibrated floating lens. However, the geometry of our system is much simpler since it does not involve the oscillation and deformation of a liquid-liquid-air contact line. We show that the Faraday waves appearing on the surface of the droplet control its shape and we draw a systematic phase diagram of the instability. A simple theoretical model allows us to derive a relation between the elongation of the droplet and the amplitude of the Faraday wave, in good agreement with measurements of both quantities.

  19. Microplastic ingestion decreases energy reserves in marine worms.

    Science.gov (United States)

    Wright, Stephanie L; Rowe, Darren; Thompson, Richard C; Galloway, Tamara S

    2013-12-02

    The indiscriminate disposal of plastic to the environment is of concern. Microscopic plastic litter (microplastic') is increasing in abundance in the marine environment, originating from the fragmentation of plastic items and from industry and personal-care products [1]. On highly impacted beaches, microplastic concentrations (Microplastics are a novel substrate for the adherence of hydrophobic contaminants [1], deposition of eggs [3], and colonization by unique bacterial assemblages [4]. Ingestion by indiscriminate deposit-feeders has been reported, yet physical impacts remain understudied [1]. Here, we show that deposit-feeding marine worms maintained in sediments spiked with microscopic unplasticised polyvinylchloride (UPVC) at concentrations overlapping those in the environment had significantly depleted energy reserves by up to 50% (Figure 1). Our results suggest that depleted energy reserves arise from a combination of reduced feeding activity, longer gut residence times of ingested material and inflammation.

  20. Structure-Property Relationships for Branched Worm-Like Micelles

    Science.gov (United States)

    Beaucage, Gregory; Rai, Durgesh

    2013-03-01

    Micellar solutions can display a wide range of phase structure as a function of counter ion content, surfactant concentration, and the presence of ternary components. Under some conditions, common to consumer products, extended cylindrical structures that display persistence and other chain features of polymers are produced. These worm-like micelles (WLMs) can form branched structures that dynamically change under shear and even in quiescent conditions. The rheology of these branched WLMs is strongly dependent on migration of the branch points, and the dynamics of branch formation and removal. Persistence and other polymer-based descriptions are also of importance. We have recently developed a scattering model for branched polyolefins and other topologically complex materials that can quantify the branching density, branch length, branch functionality and the hyperbranch (branch-on-branch) content of polymers. This work is being extended to study branching in WLMs in work coupled with Ron Larson at UMich to predict rheological properties.

  1. Worms, wisdom, and wealth: why deworming can make economic sense.

    Science.gov (United States)

    Bundy, Donald A P; Walson, Judd L; Watkins, Kristie L

    2013-03-01

    For those of us who have had worms, getting rid of them seems a good idea, and multiple studies demonstrate the simplicity and benefit of deworming children. In the past decade or so, there has been a dramatic increase in efforts to provide inexpensive deworming medications, but at the same time there have been calls to re-evaluate the impact of deworming programs. In this review, we examine the history of deworming and explore the evidence for effects of deworming on health, on child development, and on economic returns. Important policy conclusions include that a paucity of randomized trial data suggesting benefit does not equate to a lack of benefit and that a greater emphasis on documenting such benefit should be pursued.

  2. Graphical method for profiling hob mill that generate cycloid worms

    Science.gov (United States)

    Teodor, V.; Berbinschi, S.; Baroiu, N.; Oancea, N.

    2015-11-01

    The hob mill for generating ordered curls of cycloid surface with non involute profiles may be profiled based on the fundamental theorems of surface enveloping - Olivier - as surface reciprocally enveloping with point like contact. In this paper, is proposed a methodology based on a complementary theorem of the surface enveloping in a graphical expression developed in a graphical design environment - CATIA. The graphical method presented in this paper is developed in two stages: determining of the rack gear model based on the solid model of the surface to be generated, using an original algorithm, following this, based on 3D modelling is determined the solid model of the primary peripheral surface of the hob mill. An application for a cycloid worm is presented - a central screw of helical pumps. In order to prove the quality of method, the analytical and graphical solutions are comparatively presented.

  3. A GENERATIVE CAD MODEL OF A WORM GEAR MESHING

    Directory of Open Access Journals (Sweden)

    Angelika WRONKOWICZ

    2014-03-01

    Full Text Available This article introduces the term of a generative CAD model, its origins and, thus, a need of creating such a type of models. A process of generative model creation as well as specific forms of knowledge recording applied in the implementation phase in various CAD systems are briefly discussed. The example of a worm gear meshing realized by the CATIA software encapsulates the methodology of generative model construction. Sources and types of knowledge for design and construction required for development of the aforementioned model as well as the UML language as a method of formal knowledge recording are presented. The concept of model creation, i.e. assumptions and the structure as well as logic of the model operation are described. Also, the paper addresses selected elements of the project that present the manner in which the model was constructed.

  4. Nonvolatile WORM memory devices based on polymethacrylate with azoanthraquinone group

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    A novel polymethacrylate containing azoanthraquinone chromophore in the side chain(PMAzoaq6) was synthesized and characterized.An electronic memory device having the indium-tin oxide(ITO)/PMAzoaq6/Al sandwich structure was fabricated and its electrical bistability was investigated.The as-fabricated device was initially found to be at the OFF state and the switching threshold voltage was 1.5 V.After undergoing the OFF-to-ON transition,the device maintains the high conducting state(ON state) even after turning off the electrical power and applying a reverse bias.The device exhibits a write-once-read-many-times(WORM) memory effect with a high ON/OFF current ratio of up to 105 and a long retention time in both ON and OFF states,which demonstrated that the synthetic azoanthraquinone-containing polymer possesses a high potential to become polymeric memory devices.

  5. Worm burden-dependent disruption of the porcine colon microbiota by Trichuris suis infection.

    Directory of Open Access Journals (Sweden)

    Sitao Wu

    Full Text Available Helminth infection in pigs serves as an excellent model for the study of the interaction between human malnutrition and parasitic infection and could have important implications in human health. We had observed that pigs infected with Trichuris suis for 21 days showed significant changes in the proximal colon microbiota. In this study, interactions between worm burden and severity of disruptions to the microbial composition and metabolic potentials in the porcine proximal colon microbiota were investigated using metagenomic tools. Pigs were infected by a single dose of T. suis eggs for 53 days. Among infected pigs, two cohorts were differentiated that either had adult worms or were worm-free. Infection resulted in a significant change in the abundance of approximately 13% of genera detected in the proximal colon microbiota regardless of worm status, suggesting a relatively persistent change over time in the microbiota due to the initial infection. A significant reduction in the abundance of Fibrobacter and Ruminococcus indicated a change in the fibrolytic capacity of the colon microbiota in T. suis infected pigs. In addition, ∼10% of identified KEGG pathways were affected by infection, including ABC transporters, peptidoglycan biosynthesis, and lipopolysaccharide biosynthesis as well as α-linolenic acid metabolism. Trichuris suis infection modulated host immunity to Campylobacter because there was a 3-fold increase in the relative abundance in the colon microbiota of infected pigs with worms compared to naïve controls, but a 3-fold reduction in worm-free infected pigs compared to controls. The level of pathology observed in infected pigs with worms compared to worm-free infected pigs may relate to the local host response because expression of several Th2-related genes were enhanced in infected pigs with worms versus those worm-free. Our findings provided insight into the dynamics of the proximal colon microbiota in pigs in response to T

  6. Immunization of mice with cells from juvenile worms of Schistosoma japonicum provides immunoprotection against schistosomiasis

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    To validate the protective efficacy against schistosomiasis by immunization with cells from juvenile Schistosoma japonicum in a murine model and to analyze possible factors related to protection, in this study, two independent repeated vaccination trials were performed. After three subcutaneous vaccinations, in trial one, in the absence of adjuvant, primary juvenile worm cells (pJCs) from S. japonicum induced remarkable average reductions in worm burden (54.3%), liver eggs per gram (LEPG) load (59.8%) as well as egg granulomas size (66.5%) compared to PBS control group (P<0.01), which were significantly higher than those elicited by fractions of juvenile worm cells (JCFs) or fractions of juvenile worms (JWFs) (P<0.05). Non-cell components of worms (WNCs) showed no significant protection. In trial two, compared to PBS control group, significant protective effect was also observed for cultured juvenile worm cells (cJCs) from S. japonicum with 58.4% worm reduction and 68.1% LEPG reduction (P<0.01). However, cultured adult worms cells (cACs) showed significantly higher worm burden (P<0.05) and egg burden (P<0.01) when compared to cJCs. Immunological analysis of trial two revealed that cJCs engendered a Th1-biased mixed Th1/Th2 type of immune response while cACs elicited a Th2-type response. Our data indicated that immunization with both primary and cultured cells from S. japonicum juvenile worms provided high immunoprotection, for which the physical character of immunogens, stage-specific parasite and the type of immune response induced might be responsible, suggesting that vaccination with whole cells from S. japonicum larvae is a promising approach to produce protective immunity against schistosomiasis.

  7. 网络蠕虫的演化%Evolution of Internet Worms

    Institute of Scientific and Technical Information of China (English)

    宋礼鹏

    2011-01-01

    To study the evolutionary selection of intemet worms on the spreading rate under the complex ecological environment, a worms spreading model was presented. Firstly, the model's equilibria and their stability conditions were obtained mathematically and then verified by simulations. Based on the analysis, a random algorithm was used to simulate the spreading of worms at different spreading rates. Simulation results show that the complex ecology favors the worms with low spreading rate. Then, the impacts of anti-worm methods on the worms with low spreading rate were studied. Results show that the worms can be contained by enhancing the detecting ability of anti-worm system or introducing other anti-worm worms.%针对复杂生态环境中网络蠕虫对传播率的演化选择问题,给出了一个蠕虫传播模型.运用动力学分析方法得到了模型的平衡态及其稳定性条件,并进行了仿真验证.在理论分析的基础上,利用随机算法仿真了不同传播率对蠕虫传播的影响.仿真结果表明,复杂生态环境更有利于具有小传播率的蠕虫.对该类蠕虫,进一步仿真了防病毒技术对其影响.结果表明,加强杀毒系统对小传播率蠕虫的查杀能力和引入竞争性蠕虫能有效遏制该类蠕虫的传播.

  8. Two Leucobacter strains exert complementary virulence on Caenorhabditis including death by worm-star formation.

    Science.gov (United States)

    Hodgkin, Jonathan; Félix, Marie-Anne; Clark, Laura C; Stroud, Dave; Gravato-Nobre, Maria J

    2013-11-04

    The nematode Caenorhabditis elegans has been much studied as a host for microbial infection. Some pathogens can infect its intestine, while others attack via its external surface. Cultures of Caenorhabditis isolated from natural environments have yielded new nematode pathogens, such as microsporidia and viruses. We report here a novel mechanism for bacterial attack on worms, discovered during investigation of a diseased and coinfected natural isolate of Caenorhabditis from Cape Verde. Two related coryneform pathogens (genus Leucobacter) were obtained from this isolate, which had complementary effects on C. elegans and related nematodes. One pathogen, Verde1, was able to cause swimming worms to stick together irreversibly by their tails, leading to the rapid formation of aggregated "worm-stars." Adult worms trapped in these aggregates were immobilized and subsequently died, with concomitant growth of bacteria. Trapped larval worms were sometimes able to escape from worm-stars by undergoing autotomy, separating their bodies into two parts. The other pathogen, Verde2, killed worms after rectal invasion, in a more virulent version of a previously studied infection. Resistance to killing by Verde2, by means of alterations in host surface glycosylation, resulted in hypersensitivity to Verde1, revealing a trade-off in bacterial susceptibility. Conversely, a sublethal surface infection of worms with Verde1 conferred partial protection against Verde2. The formation of worm-stars by Verde1 occurred only when worms were swimming in liquid but provides a striking example of asymmetric warfare as well as a bacterial equivalent to the trapping strategies used by nematophagous fungi.

  9. Benthic macroinvertebrates in Italian rice fields

    Directory of Open Access Journals (Sweden)

    Daniela Lupi

    2013-02-01

    Full Text Available Rice fields can be considered man-managed temporary wetlands. Five rice fields handled with different management strategies, their adjacent channels, and a spring were analysed by their benthic macroinvertebrate community to i evaluate the role of rice agroe- cosystem in biodiversity conservation; ii find indicator species which can be used to compare the ecological status of natural wetlands with rice agroecosystems; and iii find the influence of environmental variables on biodiversity. Different methods of data analysis with increasing degree of complexity – from diversity index up to sophisticated multivariate analysis – were used. The investigation provided a picture of benthic macroinvertebrates inhabiting rice agroecosystems where 173 taxa were identified, 89 of which detected in rice paddies. Among them, 4 phyla (Mollusca, Annelida, Nematomorpha, and Arthropoda, 8 classes (Bivalvia, Gastropoda, Oligochaeta, Hirudinea, Gordioida, Insecta, Branchiopoda, and Malacostraca, 24 orders, 68 families, 127 genera and 159 species have been found. Ten threatened and 3 invasive species were detected in the habitats examined. The information obtained by the different methods of data analysis allowed a more comprehensive view on the value of the components of rice agroecosystems. Data analyses highlighted significant differences between habitats (feeding channel and rice field, with higher diversity observed in channels, and emphasised the role of the water chemical-physical parameters. The period of water permanence in rice fields resulted to be only one of the factors influencing the community of benthic macroinvertebrates. The presence of rare/endangered species allowed characterising some stations, but it was less informative about management strategies in rice paddies because most of these species were absent in rice fields.

  10. Benthic carbon mineralization in hadal trenches

    DEFF Research Database (Denmark)

    Wenzhöfer, F.; Oguri, K.; Middelboe, Mathias;

    2016-01-01

    consumption rates and sediment characteristics from the trench axis of two contrasting trench systems in the Pacific Ocean; the Izu-Bonin Trench underlying mesotrophic waters and the Tonga Trench underlying oligotrophic waters. In situ oxygen consumption at the Izu-Bonin Trench axis site (9200 m; 746 +/- 103...... mu mol m(-2) d(-1); n=27) was 3-times higher than at the Tonga Trench axis site (10800 m; 225 +/- 50 pmol m(-2) d(-1); n=7) presumably reflecting the higher surface water productivity in the Northern Pacific. Comparing benthic O-2 consumption rates measured in the central hadal Tonga Trench...

  11. An Integrated Experimental and Modeling Approach to Predict Sediment Mixing from Benthic Burrowing Behavior.

    Science.gov (United States)

    Roche, Kevin R; Aubeneau, Antoine F; Xie, Minwei; Aquino, Tomás; Bolster, Diogo; Packman, Aaron I

    2016-09-20

    Bioturbation is the dominant mode of sediment transport in many aquatic environments and strongly influences both sediment biogeochemistry and contaminant fate. Available bioturbation models rely on highly simplified biodiffusion formulations that inadequately capture the behavior of many benthic organisms. We present a novel experimental and modeling approach that uses time-lapse imagery to directly relate burrow formation to resulting sediment mixing. We paired white-light imaging of burrow formation with fluorescence imaging of tracer particle redistribution by the oligochaete Lumbriculus variegatus. We used the observed burrow formation statistics and organism density to parametrize a parsimonious model for sediment mixing based on fundamental random walk theory. Worms burrowed over a range of times and depths, resulting in homogenization of sediments near the sediment-water interface, rapid nonlocal transport of tracer particles to deep sediments, and large areas of unperturbed sediments. Our fundamental, parsimonious random walk model captures the central features of this highly heterogeneous sediment bioturbation, including evolution of the sediment-water interface coupled with rapid near-surface mixing and anomalous late-time mixing resulting from infrequent, deep burrowing events. This approach provides a general, transferable framework for explicitly linking sediment transport to governing biophysical processes.

  12. Benthic Habitat Variations Over Tidal Ridges, North Sea, The Netherlands

    NARCIS (Netherlands)

    Dijk, T.A.G.P. van; Dalfsen, J.A. van; Lancker, V. van; Overmeeren, R.A. van; Heteren, S. van; Doornenbal, P.J.

    2012-01-01

    Marine ecosystems on continental shelves endure an increasing burden of human activity offshore, and the impacts on benthic habitats are not well known. An improved understanding of how benthic habitats vary in relation to substrate types and seabed features is therefore essential to both scientists

  13. Tolerance of benthic foraminifera (Protista : Sarcodina) to hydrogen sulphide

    NARCIS (Netherlands)

    Moodley, L.; Schaub, B.; Van der Zwaan, G.J.; Herman, P.M.J.

    1998-01-01

    Benthic foraminifera are dominant members of tb meiofauna, commonly occurring below the anoxic-oxic interface in marine sediments. The absence of oxygen in marine coastal sediments is often correlated with the formation of hydrogen sulphide. In this study the tolerance of benthic foraminifera (from

  14. Quantifying tidally driven benthic oxygen exchange across permeable sediments

    DEFF Research Database (Denmark)

    McGinnis, Daniel F.; Sommer, Stefan; Lorke, Andreas

    2014-01-01

    of permeable sediments and has been identified as increasingly at risk for developing hypoxia. Therefore, we investigate the benthic O-2 exchange across the permeable North Sea sediments using a combination of in situ microprofiles, a benthic chamber, and aquatic eddy correlation. Tidal bottom currents drive...

  15. Mesh theory of angle modified dual tori double-enveloping toroidal worm drive

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    In this paper, the meshing theory of the angle modified hourglass worm drive is enriched and developed. The ordinary condition of the angle modification is derived and the physical significance of the modification is interpreted. A normal section methodology is proposed for meshing analysis, which can be used to compute the normal distance near a singular meshing point of a conjugate surface couple. By means of the method and after analyzing the normal transversals, it is specified that the worm helicoid, the nominal former contact zone and the new contact zone intersect each other along the locus of singular points of the instantaneous contact lines of an angle-modified worm pair. As a result, it is explained clearly that those three osculate each other but the osculations are different in degree. Moreover, the mechanism of removing the twice-contacted zone from the worm gear tooth surface is clarified and the reason of shortening the worm working length is also elucidated. With the help of the theory described in the present paper and the thorough and systematic research on the relevant meshing characteristics, the angle modified dual tori double-enveloping toroidal worm drive has been shown to be an excellent new-fashioned hourglass worm set.

  16. Curcumin Generates Oxidative Stress and Induces Apoptosis in Adult Schistosoma mansoni Worms

    Science.gov (United States)

    de Paula Aguiar, Daniela; Brunetto Moreira Moscardini, Mayara; Rezende Morais, Enyara; Graciano de Paula, Renato; Ferreira, Pedro Manuel; Afonso, Ana; Belo, Silvana; Tomie Ouchida, Amanda; Curti, Carlos; Cunha, Wilson Roberto; Rodrigues, Vanderlei

    2016-01-01

    Inducing apoptosis is an interesting therapeutic approach to develop drugs that act against helminthic parasites. Researchers have investigated how curcumin (CUR), a biologically active compound extracted from rhizomes of Curcuma longa, affects Schistosoma mansoni and several cancer cell lines. This study evaluates how CUR influences the induction of apoptosis and oxidative stress in couples of adult S. mansoni worms. CUR decreased the viability of adult worms and killed them. The tegument of the parasite suffered morphological changes, the mitochondria underwent alterations, and chromatin condensed. Different apoptotic parameters were determined in an attempt to understand how CUR affected adult S. mansoni worms. CUR induced DNA damage and fragmentation and increased the expression of SmCASP3/7 transcripts and the activity of Caspase 3 in female and male worms. However, CUR did not intensify the activity of Caspase 8 in female or male worms. Evaluation of the superoxide anion and different antioxidant enzymes helped to explore the mechanism of parasite death further. The level of superoxide anion and the activity of Superoxide Dismutase (SOD) increased, whereas the activity of Glutathione-S-Transferase (GST), Glutathione reductase (GR), and Glutathione peroxidase (GPX) decreased, which culminated in the oxidation of proteins in adult female and male worms incubated with CUR. In conclusion, CUR generated oxidative stress followed by apoptotic-like-events in both adult female and male S. mansoni worms, ultimately killing them. PMID:27875592

  17. Bioassessment of Choghakhor Wetland using Benthic Macroinvertebrates

    Directory of Open Access Journals (Sweden)

    P. Fathi

    2016-05-01

    Full Text Available In present study, besides investigating benthic communities and their demographics in Choghakhor wetland, the water quality has been evaluated and classified. Then, 10 stations were selected and sampling of benthos was done every 45 days since April 2010 to March 2011, with 3 replications at each station. Samples were obtained by Ekman grab Sampler (surface 400 cm2. The collected samples were separated and fixed by formalin (4%. The Macroinvertebrates samples were identified and counted in laboratory. Generally 25 families of benthic macroinvertebrates belonging to 5 classes and 12 orders were identified. The results were calculated as community measures, including total richness, Shannon - Wiener diversity index and Hilsenhoff Biological index at family level. The results obtained from temporal and spatial changes of data (Statgeraphics software and water qualitative classification using Shannon diversity index conformed to biological Hilsenhoff index. And finally, water quality of wetland was assessed to be polluted in average to high level. According to this study findings, it seems that, these indicators could be used as useful tools for evaluating water supplies quality.

  18. Benthic Macroinvertebrate Communities in Agriculturally Impaired Streams

    Directory of Open Access Journals (Sweden)

    Virginija Pliuraite

    2009-10-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE This work presents research into the taxonomic composition of macroinvertebrate communities in streams that are under the influence of agricultural pollution A total of 67 macroinvertebrate taxa (including 61 identified species belonging to 40 families have been identified in the explored streams. The greatest species richness is recorded for the Trichoptera (18 species/1 taxa and Mollusca (12 species. The molluscs Gyraulus albus, amphipods Gammarus pulex, caddisflies Hydropsyche pellucidula and oligochaetes are detected in all examined streams. There, the number of total benthic macroinvertebrate taxa is highly variable, ranging from 16 to 40. Results show that the examined streams depending on the benthic macroinvertebrate taxonomic composition and predominance of seperate macroinvertebrate groups undergo different pollution. Intolerant to pollution taxa such as Plecoptera, which are the most sensitive to pollution insects, have been found only in 5 of 12 examined streams and in low abundances. The richness and diversity of macrozoobenthos in some streams appear to respond to the water quality deterioration. The present study has found out that in the stream where the total macroinvertebrate taxa, EPT taxa richness are the lowest and a relative abundance of gatherers is the highest, the values of NH4-N, NO3-N, total N, PO4-P and total P in the stream water are the highest, too.

  19. Viability of developmental stages of Schistosoma mansoni quantified with xCELLigence worm real-time motility assay (xWORM).

    Science.gov (United States)

    Rinaldi, Gabriel; Loukas, Alex; Brindley, Paul J; Irelan, Jeff T; Smout, Michael J

    2015-12-01

    Infection with helminth parasites causes morbidity and mortality in billions of people and livestock worldwide. Where anthelmintic drugs are available, drug resistance is a major problem in livestock parasites, and a looming threat to public health. Monitoring the efficacy of these medicines and screening for new drugs has been hindered by the lack of objective, high-throughput approaches. Several cell monitoring technologies have been adapted for parasitic worms, including video-, fluorescence-, metabolism enzyme- and impedance-based tools that minimize the screening bottleneck. Using the xCELLigence impedance-based system we previously developed a motility-viability assay that is applicable for a range of helminth parasites. Here we have improved substantially the assay by using diverse frequency settings, and have named it the xCELLigence worm real-time motility assay (xWORM). By utilizing strictly standardized mean difference analysis we compared the xWORM output measured with 10, 25 and 50 kHz frequencies to quantify the motility of schistosome adults (human blood flukes) and hatching of schistosome eggs. Furthermore, we have described a novel application of xWORM to monitor movement of schistosome cercariae, the developmental stage that is infectious to humans. For all three stages, 25 kHz was either optimal or near-optimal for monitoring and quantifying schistosome motility. These improvements in methodology sensitivity should enhance the capacity to screen small compound libraries for new drugs both for schistosomes and other helminth pathogens at large.

  20. Automatic defense against zero-day polymorphic worms in communication networks

    CERN Document Server

    Mohammed, Mohssen

    2013-01-01

    Able to propagate quickly and change their payload with each infection, polymorphic worms have been able to evade even the most advanced intrusion detection systems (IDS). And, because zero-day worms require only seconds to launch flooding attacks on your servers, using traditional methods such as manually creating and storing signatures to defend against these threats is just too slow. Bringing together critical knowledge and research on the subject, Automatic Defense Against Zero-day Polymorphic Worms in Communication Networks details a new approach for generating automated signatures for un

  1. Discussion on the systematic position of the Early Cambrian priapulomorph worms

    Institute of Scientific and Technical Information of China (English)

    HUANG Diying; CHEN Junyuan; J. VANNIER

    2006-01-01

    @@ Priapulid worms form a small marine phylum in present-day environments with only 18 described species, but they were the most abundant animals in the endobenthic communities of the Cambrian. They are particularly well represented in the Lower Cambrian Maotianshan Shale of China [1-3] and the Middle Cambrian Burgess Shale of Canada [4]. The priapulid worms from the 530 Ma old Maotianshan Shale 5 be placed within 6 basic groups: selkirkiid, corynetid, anningid, palaeoscolecidan, tylotitid and priapuliid [5]. In addition, another important endobenthic worm phylum, the Sipuncula has been also reported from the Maotianshan Shale [6].

  2. Gallbladder ascariasis with uneventful worm migration back to the duodenum: A case report.

    Science.gov (United States)

    Mushtaque, Majid; Khan, Parwez Sajad; Mir, Mohammad Farooq; Khanday, Samina Ali

    2012-04-01

    Ascariasis, a worldwide parasitic disease, is regarded by some authorities as the most common parasitic infection in humans. The causative organism is Ascaris lumbricoides, which normally lives in the lumen of the small intestine. From the intestine, the worm can invade the bile duct or pancreatic duct, but invasion into the gallbladder is quite rare because of the anatomical features of the cystic duct, which is narrow and tortuous. Once it enters the gallbladder, it is exceedingly rare for the worm to migrate back to the intestine. We report a case of gallbladder ascariasis with worm migration back into the intestine, in view of its rare presentation.

  3. Phagocytes: A Holistic Defense and Protection Against Active P2P Worms

    OpenAIRE

    Chen, Ruichuan; Lua, Eng Keong; Crowcroft, Jon; Tang, Liyong; Chen, Zhong

    2011-01-01

    Active Peer-to-Peer (P2P) worms present serious threats to the global Internet by exploiting popular P2P applications to perform rapid topological self-propagation. Active P2P worms pose more deadly threats than normal scanning worms because they do not exhibit easily detectable anomalies, thus many existing defenses are no longer effective. We propose an immunity system with Phagocytes --- a small subset of elected P2P hosts that are immune with high probability and specialized in finding an...

  4. 14C as a tracer of labile organic matter in Antarctic benthic food webs

    Science.gov (United States)

    Purinton, Brett L.; DeMaster, David J.; Thomas, Carrie J.; Smith, Craig R.

    2008-11-01

    14C measurements were made on surface plankton, particle-trap material, surface sediment, benthic invertebrate gut contents, and body tissue samples to assess the effectiveness of this radioisotope as a tracer of labile organic carbon in Antarctic benthic food webs. Samples were collected on five cruises to the West Antarctic Peninsula (WAP) shelf between November 1999 and March 2001 as part of the Food for Benthos on the ANtarctic Continental-Shelf (FOODBANCS) Project. The 14C contents of the body tissues from a variety of deposit feeders (-126±13 per mil) were substantially enriched relative to the surface sediment (-234±13 per mil) and statistically similar to the organic matter collected in plankton tows (-135±10 per mil), indicating that recently produced marine plankton are the primary source of nutrition for these deposit feeders on the West Antarctic shelf. Selective ingestion was the primary feeding strategy used by echiuran worms and certain holothurians (i.e. Peniagone vignoni) for incorporating labile organic carbon into their tissues as demonstrated by the large differences (105±13 per mil) between surface sediment and gut content 14C activities. In contrast, digestive and/or assimilatory selection was the predominant strategy used by an irregular urchin ( Amphipneustes lorioli) and several other holothurians ( Protelpidia murrayi, Bathyplotes fuscivinculum and the head-down conveyor belt feeder, Molpadia musculus), as demonstrated by large differences (42±7 per mil) between the 14C activities of their foregut or whole-gut organic contents and their body tissues. Despite large fluctuations in carbon export from the euphotic zone, benthic feeding strategies remained essentially constant over the 15-month sampling period. No seasonal variation was evident in either the 14C abundance of the deposit-feeder body tissues, or in the 14C abundance of their gut contents. The mean 14C abundance in the body tissues of the two sub-surface deposit feeders ( A

  5. Benthic processes affecting contaminant transport in Upper Klamath Lake, Oregon

    Science.gov (United States)

    Kuwabara, James S.; Topping, Brent R.; Carter, James L.; Carlson, Rick A; Parchaso, Francis; Fend, Steven V.; Stauffer-Olsen, Natalie; Manning, Andrew J.; Land, Jennie M.

    2016-09-30

    Executive SummaryMultiple sampling trips during calendar years 2013 through 2015 were coordinated to provide measurements of interdependent benthic processes that potentially affect contaminant transport in Upper Klamath Lake (UKL), Oregon. The measurements were motivated by recognition that such internal processes (for example, solute benthic flux, bioturbation and solute efflux by benthic invertebrates, and physical groundwater-surface water interactions) were not integrated into existing management models for UKL. Up until 2013, all of the benthic-flux studies generally had been limited spatially to a number of sites in the northern part of UKL and limited temporally to 2–3 samplings per year. All of the benthic invertebrate studies also had been limited to the northern part of the lake; however, intensive temporal (weekly) studies had previously been completed independent of benthic-flux studies. Therefore, knowledge of both the spatial and temporal variability in benthic flux and benthic invertebrate distributions for the entire lake was lacking. To address these limitations, we completed a lakewide spatial study during 2013 and a coordinated temporal study with weekly sampling of benthic flux and benthic invertebrates during 2014. Field design of the spatially focused study in 2013 involved 21 sites sampled three times as the summer cyanobacterial bloom developed (that is, May 23, June 13, and July 3, 2013). Results of the 27-week, temporally focused study of one site in 2014 were summarized and partitioned into three periods (referred to herein as pre-bloom, bloom and post-bloom periods), each period involving 9 weeks of profiler deployments, water column and benthic sampling. Partitioning of the pre-bloom, bloom, and post-bloom periods were based on water-column chlorophyll concentrations and involved the following date intervals, respectively: April 15 through June 10, June 17 through August 13, and August 20 through October 16, 2014. To examine

  6. Bioaccumulation of As, Cd, Cr, Hg(II), and MeHg in killifish (Fundulus heteroclitus) from amphipod and worm prey.

    Science.gov (United States)

    Dutton, Jessica; Fisher, Nicholas S

    2011-08-15

    Elevated metal levels in fish are a concern for the fish themselves, their predators, and possibly humans who consume contaminated seafood. Metal bioaccumulation models often rely on assimilation efficiencies (AEs) of ingested metals and loss rate constants after dietary exposure (k(ef)s). These models can be used to better understand processes regulating metal accumulation and can be used to make site-specific predictions of metal concentrations in animal tissues. Fish often consume a varied diet, and prey choice can influence these two parameters. We investigated the trophic transfer of As, Cd, Cr, Hg(II), and methylmercury (MeHg) from a benthic amphipod (Leptocheirus plumulosus) and an oligochaete (Lumbriculus variegatus) to killifish (Fundulus heteroclitus) using gamma-emitting radioisotopes. Except for MeHg, AEs varied between prey type. AEs were highest for MeHg (92%) and lowest for Cd (2.9-4.5%) and Cr (0.2-4%). Hg(II) showed the largest AE difference between prey type (14% amphipods, 24% worms). For Cd and Hg(II) k(ef)s were higher after consuming amphipods than consuming worms. Tissue distribution data shows that Cd and Hg(II) were mainly associated with the intestine, whereas As and MeHg were transported throughout the body. Calculated trophic transfer factors (TTFs) suggest that MeHg is likely to biomagnify at this trophic step at all ingestion rates, whereas As, Cd, Cr, and Hg(II) will not. Data collected in this study and others indicate that using one prey item to calculate AE and k(ef) could lead to an over- or underestimation of these parameters.

  7. Serological screening of the Schistosoma mansoni adult worm proteome.

    Directory of Open Access Journals (Sweden)

    Fernanda Ludolf

    2014-03-01

    Full Text Available BACKGROUND: New interventions tools are a priority for schistosomiasis control and elimination, as the disease is still highly prevalent. The identification of proteins associated with active infection and protective immune response may constitute the basis for the development of a successful vaccine and could also indicate new diagnostic candidates. In this context, post-genomic technologies have been progressing, resulting in a more rational discovery of new biomarkers of resistance and antigens for diagnosis. METHODOLOGY/PRINCIPAL FINDINGS: Two-dimensional electrophoresed Schistosoma mansoni adult worm protein extracts were probed with pooled sera of infected and non-infected (naturally resistant individuals from a S. mansoni endemic area. A total of 47 different immunoreactive proteins were identified by mass spectrometry. Although the different pooled sera shared most of the immunoreactive protein spots, nine protein spots reacted exclusively with the serum pool of infected individuals, which correspond to annexin, major egg antigen, troponin T, filamin, disulphide-isomerase ER-60 precursor, actin and reticulocalbin. One protein spot, corresponding to eukaryotic translation elongation factor, reacted exclusively with the pooled sera of non-infected individuals living in the endemic area. Western blotting of two selected recombinant proteins, major egg antigen and hemoglobinase, showed a similar recognition pattern of that of the native protein. CONCLUDING/SIGNIFICANCE: Using a serological proteome analysis, a group of antigens related to the different infection status of the endemic area residents was identified and may be related to susceptibility or resistance to infection.

  8. Worm control practices on sheep farms in the Slovak Republic.

    Science.gov (United States)

    Cernanská, Dana; Várady, Marián; Cudeková, Patrícia; Corba, Július

    2008-07-04

    A questionnaire to obtain information on worm control practices and sheep management was performed on 49 sheep farms in 2003 and 2004. The majority of Slovak farms kept native breeds Tsigai (22 farms) and Improved Valachian (14 farms). Farms were divided according to their altitude to lowland, upland and lower highland farms. Sizes of pastures and stocking rates for lowland, upland and lower highland farms were 81.5, 269.2, and 316.7 ha and 6.3, 2.6, and 2.9 sheep/ha, respectively. One third of farmers (33.3%) used permanent pastures and two thirds of breeders (66.7%) rotated sheep between pastures. Mean drenching rate for lambs and yearlings/adults was 1.76 and 1.70, respectively. The most frequently used drugs during period from 1999 to 2004 were albendazole and ivermectin. On 13 farms benzimidazole drugs were applied in spring before turn out and macrocyclic lactones in autumn before turn in. Benzimidazoles and macrocyclic lactones were used almost exclusively on 7 and 9 farms, respectively. Visual appraisal was the most common practice to determine weight of animals (87.8% of farmers). Weights of the heaviest animals were used for determination of anthelmintic doses only on 16.7% of farms. Coprological examinations were performed on 47.9% of farms, usually in frequency once per year (75%).

  9. Bioaccumulation and biological effects of cigarette litter in marine worms

    Science.gov (United States)

    Wright, Stephanie L.; Rowe, Darren; Reid, Malcolm J.; Thomas, Kevin V.; Galloway, Tamara S.

    2015-01-01

    Marine debris is a global environmental issue. Smoked cigarette filters are the predominant coastal litter item; 4.5 trillion are littered annually, presenting a source of bioplastic microfibres (cellulose acetate) and harmful toxicants to marine environments. Despite the human health risks associated with smoking, little is known of the hazards cigarette filters present to marine life. Here we studied the impacts of smoked cigarette filter toxicants and microfibres on the polychaete worm Hediste diversicolor (ragworm), a widespread inhabitant of coastal sediments. Ragworms exposed to smoked cigarette filter toxicants in seawater at concentrations 60 fold lower than those reported for urban run-off exhibited significantly longer burrowing times, >30% weight loss, and >2-fold increase in DNA damage compared to ragworms maintained in control conditions. In contrast, ragworms exposed to smoked cigarette filter microfibres in marine sediment showed no significant effects. Bioconcentration factors for nicotine were 500 fold higher from seawater than from sediment. Our results illustrate the vulnerability of organisms in the water column to smoking debris and associated toxicants, and highlight the risks posed by smoked cigarette filter debris to aquatic life. PMID:26369692

  10. A SEM study of the reindeer sinus worm (Linguatula arctica

    Directory of Open Access Journals (Sweden)

    Sven Nikander

    2009-01-01

    Full Text Available Pentastomids are a group of peculiar parasitic arthropods, often referred to as tongue worms due to the resemblance of some species to a tongue. Linguatula arctica is the sinus worm of the reindeer (Rangifer tarandus, being the only pentastomid to have a direct life cycle and an ungulate as a definite host. Here, the surface structures and internal anatomy of adult L. arctica are described as seen by scanning electron microscopy (SEM. Sinus worms were collected in the winter 1991-92 in Finnish Lapland. Paranasal cavities of about 80 reindeer were examined and 30 sinus worms were found. The sinus worms had typical Linguatula sp. morphology, being paddle-shaped, transparent, pale yellow, dorsoventrally flattened and pseudosegmented with a long tapering end. Present at the anteroventral part of the cephalothorax was an oral opening with a large, conspicuous, head-like papillar structure. Bilaterally, on both sides of this opening, was a pair of strong curved hooks. The cephalothorax and abdomen had a segmented appearance, as they showed distinct annulation. There was a small cup-shaped sensory organ present at the lateral margin on each annula. The posterior edge of each annula was roughened by tiny spines projecting backwards. Throughout the cuticular surface, small, circular depressions that represented the apical portion of chloride cells. The genital opening of the male was located medioventrally between the tips of the posterior pair of hooks, and that of the female posteroventrally and subterminally. In both sexes, the genital opening was bilaterally flanked by papillar (in males or leaf-like (in females structures. One copulating couple was present, with the male attached to the posteroventral part of the female with its anteroventral hooks and papillae. Several structures typical of arthropods and other pentastomids were identified. Because SEM allows only surfaces to be studied, the morphology and especially the sense organs of L. arctica

  11. CHRONIC EFFECTS OF THE HERBICIDE DIURON ON FRESHWATER CLADOCERANS,AMPHIPODS,MIDGES,MINNOWS,WORMS, AND SNAILS

    Science.gov (United States)

    The chronic effects of the herbicide diuron on survival and reproduction of Daphnia pulex, and survival and growth of the amphipod Hyalella azteca, the midge Chironomus tentans, juvenile and embro/larval fathead minnows, Pimephales promelas, annelid worms, Lumbriculus variegatus,...

  12. Dynamics of Infected Snails and Mated Schistosoma Worms within the Human Host

    Directory of Open Access Journals (Sweden)

    G. Besigye-Bafaki

    2005-01-01

    Full Text Available Male and female worms are independently distributed within a human host each with a Poisson probability distribution mass function. Mating takes place immediately when partners are available. It was found that the mated worm function is non-linear near the origin and becomes almost linear as the worms increase. They increase with increase in the worm load due to aggregation of worms. This also increases the infection of snails which are secondary hosts. On the analysis of the model, three equilibrium states were found, two of which were stable and one unstable. A stable endemic equilibrium within a community is very much undesirable. So the main objective of the model was to have the point O(0,0 as the only equilibrium point. This is a situation where there are no worms within the human host and the environment is free of infected snails. A critical point, above which the disease would be chronic and below which the disease would be eradicated, was found and analyzed. The parameters indicated that to achieve a disease free environment, the death rate of worms within the human host should be much greater than the cercariae that penetrate the human. Also the death rate of infected snails should be much higher than the contact rate between the miracidia and the snails. It was concluded that de-worming and killing of snails should be emphasized for disease control and educating the masses on the modes of disease transmission is quite necessary for prevention of the disease.

  13. Round worm in common bile duct, a rare pathology: Review of 15 cases

    Directory of Open Access Journals (Sweden)

    Biswaranjan Nayak

    2014-01-01

    Full Text Available Round worm or Ascaris lumbricoides has a worldwide distribution but is more prevalent in the developing countries like India and other South Asian countries. In human beings, round worms are commonly found in the small intestine, particularly the jejunum. If the pathogen load is very high, it may migrate to other sites and manifest different symptoms. In this paper, we share our experience of biliary ascariasis with regards to its clinical presentation, diagnosis, conservative and surgical management.

  14. Red worm behavior (Eisenia spp. in vermicomposting systems of organic residues

    Directory of Open Access Journals (Sweden)

    Mamani-Mamani Gladys

    2012-08-01

    Full Text Available This work evaluates the behavior of the vermicomposting red worm (Eisenia spp. in two environments (greenhouse and unsheltered and with two solid organic substrates (cow manure=CM and kitchen waste=KW in the zone of Carmen Pampa, Nor Yungas Province, Department of La Paz – Bolivia, using a factorial design with two factors and three repetitions (ANOVA analysis. The largest number of cocoons was found in the greenhouse treatment, with 64 in CM and 41 in KW. Cocoon viability was also greatest in the greenhouse treatment, at 100% for CM and 96% for KW. Similarly, the greatest number of worms hatched from cocoons was in the greenhouse treatment, with 2 immature worms for CM and 3.5 for KW, and the greatest number of immature worms was registered in the greenhouse treatment with 123 individuals in CM and 16 in KW. The lowest mortality rate due to environment was in the greenhouse treatment, with 3.90% mortality with CM and 88.64% with KW. The greatest number of mature worms (with clitella was in the unsheltered treatment, with 15 in CM and 21 in KW. The greatest biomass of immature worms was found in the greenhouse treatment, with 1.41 g of worms for CM and 0.185 g for KW; however, the greatest biomass of mature worms was in the KW treatment, with 7.98 g for the greenhouse treatment and 6.93 g for the unsheltered treatment. The phytotoxicity from CM vermicompost in the two environments was lowest, exhibiting a 66.6% rate of germination, and the opposite was true for KW, which was the most toxic in both environments. Macronutrient content in vermicompost obtained was: nitrogen at 2.45% and 2.31%, phosphorus at 500 mg kg-1 and 220 mg kg-1 and potassium at 27.43 and 2.76 cmol(+ kg-1 of dry substrate in KW and CM respectively.

  15. Spatial distribution maps for benthic communities

    DEFF Research Database (Denmark)

    Sørensen, Per S.

    1999-01-01

    amount of missing pixel data is a contribution to statistical image analysis. Furthermore, the estimation method developed for non-stationary Boolean models that combines scale-space kernel smoothing with the so-called method-of-moments applied to stationary Boolean models is a contribution to stochastic...... of the distribution maps and to be combined with biogeochemical models describing spatiotemporal population dynamics. Finally, the use of side-scan sonar data is illustrated in a data fusion exercise combining side-scan sonar data with the results based on echo sounder measurements. The feasible use of side......-scan sonar for mapping of benthic communities remains an open task to be studied in the future. The data processing methodology developed is a contribution to the emerging field of hydroacoustic marine biology. The method of penalised maximum pseudo-likelihood for estimation of the Ising model under a huge...

  16. 基于刚柔耦合的蜗轮蜗杆疲劳寿命分析%Fatigue Life Analysis of Worm and Worm Wheel Based on FAMFAT

    Institute of Scientific and Technical Information of China (English)

    史亮; 范久臣; 冯增铭; 乔晗

    2016-01-01

    Focus on the mechanical transmission mechanism of worm and worm wheel in the load fatigue failure under the action of the problem , by Recurdyn the coupled analysis of worm gear and worm, obtained the worm gear and worm in the load stress distribution. Based on the coupling analysis results, through FAMFAT analysis the fatigue life of the worm gear and worm, obtained the worm gear and worm fatigue life and the safety factor, determines the load stress concentration is the main cause of fatigue damage, the results of the analysis have important significance for further structural optimization.%针对机械传动机构中蜗轮蜗杆在正常载荷作用下发生疲劳破坏的问题,通过Recurdyn对蜗轮蜗杆进行刚柔耦合分析,得出了蜗轮蜗杆的载荷应力应变云图。基于耦合分析结果,通过FAMFAT对蜗轮蜗杆的疲劳寿命分析,得出了蜗轮蜗杆疲劳寿命与安全系数,确定了载荷应力集中是引起疲劳破坏的主要原因,分析结果为进一步结构优化有重要意义。

  17. Flavonoids and Sesquiterpene Lactones from Artemisia absinthium and Tanacetum parthenium against Schistosoma mansoni Worms

    Directory of Open Access Journals (Sweden)

    Luísa Maria Silveira de Almeida

    2016-01-01

    Full Text Available Human schistosomiasis, caused by trematode worms of the genus Schistosoma, is one of the most significant neglected tropical diseases, affecting more than 200 million individuals worldwide and praziquantel is the only available drug to treat this disease. Artemisia absinthium L. and Tanacetum parthenium L. are species popularly used as anthelmintics. We investigated the in vitro schistosomicidal activity of crude extracts of A. absinthium (AA and T. parthenium (TP and their isolated compounds. AA and TP, at 200 μg/mL, were active, causing 100% mortality of all adult worms. Chromatographic fractionation of AA leads to isolation of artemetin and hydroxypelenolide, while santin, apigenin, and parthenolide were isolated from TP. Artemetin, hydroxypelenolide, santin, and apigenin, at 100 μM, were inactive against adult worms. Parthenolide (12.5 to 100 μM caused 100% mortality, tegumental alterations, and reduction of motor activity of all adult worms of S. mansoni, without affecting mammalian cells. Confocal laser scanning microscopy showed tegumental morphological alterations and changes on the numbers of tubercles of S. mansoni worms. This report provides the first evidence for the in vitro activity of parthenolide against adult worms of S. mansoni, opening the route to further schistosomicidal studies with this compound.

  18. Durability Characteristics Analysis of Plastic Worm Wheel with Glass Fiber Reinforced Polyamide

    Directory of Open Access Journals (Sweden)

    Tae-Il Seo

    2013-05-01

    Full Text Available Plastic worm wheel is widely used in the vehicle manufacturing field because it is favorable for weight lightening, vibration and noise reduction, as well as corrosion resistance. However, it is very difficult for general plastics to secure the mechanical properties that are required for vehicle gears. If the plastic resin is reinforced by glass fiber in the fabrication process of plastic worm wheel, it is possible to achieve the mechanical properties of metallic material levels. In this study, the mechanical characteristic analysis of the glass-reinforced plastic worm wheel, according to the contents of glass fiber, is performed by analytic and experimental methods. In the case of the glass fiber-reinforced resin, the orientation and contents of glass fibers can influence the mechanical properties. For the characteristic prediction of plastic worm wheel, computer-aided engineering (CAE analysis processes such as structural and injection molding analysis were executed with the polyamide resin reinforcement glass fiber (25 wt %, 50 wt %. The injection mold for fabricating the prototype plastic worm wheel was designed and made to reflect the CAE analysis results. Finally, the durability of prototype plastic worm wheel fabricated by the injection molding process was evaluated by the experimental method and the characteristics according to the glass fiber contents.

  19. Propagation Modeling and Defending of a Mobile Sensor Worm in Wireless Sensor and Actuator Networks

    Science.gov (United States)

    Wang, Tian; Wu, Qun; Wen, Sheng; Cai, Yiqiao; Tian, Hui; Chen, Yonghong; Wang, Baowei

    2017-01-01

    WSANs (Wireless Sensor and Actuator Networks) are derived from traditional wireless sensor networks by introducing mobile actuator elements. Previous studies indicated that mobile actuators can improve network performance in terms of data collection, energy supplementation, etc. However, according to our experimental simulations, the actuator’s mobility also causes the sensor worm to spread faster if an attacker launches worm attacks on an actuator and compromises it successfully. Traditional worm propagation models and defense strategies did not consider the diffusion with a mobile worm carrier. To address this new problem, we first propose a microscopic mathematical model to describe the propagation dynamics of the sensor worm. Then, a two-step local defending strategy (LDS) with a mobile patcher (a mobile element which can distribute patches) is designed to recover the network. In LDS, all recovering operations are only taken in a restricted region to minimize the cost. Extensive experimental results demonstrate that our model estimations are rather accurate and consistent with the actual spreading scenario of the mobile sensor worm. Moreover, on average, the LDS outperforms other algorithms by approximately 50% in terms of the cost. PMID:28098748

  20. Propagation Modeling and Defending of a Mobile Sensor Worm in Wireless Sensor and Actuator Networks.

    Science.gov (United States)

    Wang, Tian; Wu, Qun; Wen, Sheng; Cai, Yiqiao; Tian, Hui; Chen, Yonghong; Wang, Baowei

    2017-01-13

    WSANs (Wireless Sensor and Actuator Networks) are derived from traditional wireless sensor networks by introducing mobile actuator elements. Previous studies indicated that mobile actuators can improve network performance in terms of data collection, energy supplementation, etc. However, according to our experimental simulations, the actuator's mobility also causes the sensor worm to spread faster if an attacker launches worm attacks on an actuator and compromises it successfully. Traditional worm propagation models and defense strategies did not consider the diffusion with a mobile worm carrier. To address this new problem, we first propose a microscopic mathematical model to describe the propagation dynamics of the sensor worm. Then, a two-step local defending strategy (LDS) with a mobile patcher (a mobile element which can distribute patches) is designed to recover the network. In LDS, all recovering operations are only taken in a restricted region to minimize the cost. Extensive experimental results demonstrate that our model estimations are rather accurate and consistent with the actual spreading scenario of the mobile sensor worm. Moreover, on average, the LDS outperforms other algorithms by approximately 50% in terms of the cost.

  1. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  2. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  3. Organic enrichment and benthic fauna–Some ecological consideration.

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Ingole, B.S.; Abidi, S.A.H.

    and quantity, could act as a food source or as a stress source for the benthic community. Present study further demonstrated the general trend of modeled hypothesis with some variation in tropical condition....

  4. Coastal Bend Texas Benthic Habitat - Lower Laguna Madre 2004 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  5. Coastal Bend Texas Benthic Habitat - Lower Laguna Madre 2004 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  6. Shallow-water Benthic Habitats in Jobos Bay

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of Jobos Bay, Puerto Rico were mapped and characterized using visual interpretation...

  7. Coastal Bend Texas Benthic Habitat Mapping Patchy Shapefile Map

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  8. Coastal Bend Texas Benthic Habitat - San Antonio Bay 2007 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  9. Coastal Bend Texas Benthic Habitat - Lower Laguna Madre 2004 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  10. Northeast Puerto Rico and Culebra Island - Benthic Habitat Map 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This benthic habitat map was created from a semi-automated habitat mapping process, using a combination of bathymetry, satellite imagery, aerial imagery and...

  11. Puerto Rico Land-Based Threat to Benthic Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set describes the potential threat of sediment delivery and land-based sources of pollution to benthic habitats. This dataset is derived from NOAA's...

  12. St. John Benthic Habitat Mapping - Moderate Depth Ground Validation Sites

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats of the moderate-depth marine environment in and around the Virgin Islands Coral Reef National Monument were mapped using a combination of...

  13. Atlantic Deep-Water Canyons (Benthic Landers) 2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Each benthic lander contains a programmable sediment trap which can take 12 monthly samples, plus instruments to record temperature, salinity, dissolved oxygen,...

  14. Coastal Bend Texas Benthic Habitat - Lower Laguna Madre 2004 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  15. Coastal Bend Texas Benthic Habitat Mapping Aransas Bay 2004 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  16. Benthic grab data from October 1999 in Apalachicola Bay, Florida

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Apalachicola Bay National Estuarine Research Reserve and the NOAA Office for Coastal Management worked together to map benthic habitats within Apalachicola Bay,...

  17. Puerto Rico Land-Based Threat to Benthic Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set describes the potential threat of sediment delivery and land-based sources of pollution to benthic habitats. This dataset is derived from NOAA's study,...

  18. Coastal Bend Texas Benthic Habitat Mapping Redfish Bay 2004 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  19. Vieques, Puerto Rico Benthic Habitat Map - Accuracy Assessment Sites

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitat maps of the nearshore marine environment of Vieques, Puerto Rico were created by visual interpretation of remotely sensed imagery. The objective of...

  20. Shallow-Water Benthic Habitats of Southwest Puerto Rico

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  1. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  2. USVI Land-Based Threat to Benthic Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set describes the potential threat of sediment delivery and land-based sources of pollution to benthic habitats. This dataset is derived from NOAA's...

  3. Coastal Bend Texas Benthic Habitat - San Antonio Bay 2007 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  4. Coastal Bend Texas Benthic Habitat - San Antonio Bay 2007 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  5. Coastal Bend Texas Benthic Habitat - San Antonio Bay 2007 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  6. NEFSC Benthic Habitat Survey (AL0304, EK60)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This survey will collect benthic samples using acoustics, nets, and grab samplers. The survey will monitor and map the geological, physical, and biological habitats...

  7. Effects of Lumbriculus variegatus (Annelida, Oligochaete) bioturbation on zinc sediment chemistry and toxicity to the epi-benthic invertebrate Chironomus tepperi (Diptera: Chironomidae).

    Science.gov (United States)

    Colombo, Valentina; Pettigrove, Vincent J; Hoffmann, Ary A; Golding, Lisa A

    2016-09-01

    Classical laboratory-based single-species sediment bioassays do not account for modifications to toxicity from bioturbation by benthic organisms which may impact predictions of contaminated sediment risk to biota in the field. This study aims to determine the effects of bioturbation on the toxicity of zinc measured in a standard laboratory bioassay conducted with chironomid larvae (Chironomus tepperi). The epi-benthic chironomid larvae were exposed to two different levels of sediment contamination (1600 and 1980 mg/kg of dry weight zinc) in the presence or absence of annelid worms (Lumbriculus variegatus) which are known to be tolerant to metal and to have a large impact on sediment properties through bioturbation. Chironomids had 5-6x higher survival in the presence of L. variegatus which shows that bioturbation had a beneficial effect on the chironomid larvae. Chemical analyses showed that bioturbation induced a flux of zinc from the pore water into the water column, thereby reducing the bioavailability of zinc in pore water to the chironomid larvae. This also suggested that pore water was the major exposure path for the chironomids to metals in sediment. During the study, annelid worms (Oligochaetes) produced a thin layer of faecal pellets at the sediment surface, a process known to: (i) create additional adsorption sites for zinc, thus reducing its availability, (ii) increase the microbial abundance that in turn could represent an additional food source for opportunistic C. tepperi larvae, and (iii) modify the microbial community's structure and alter the biogeochemical processes it governs thus indirectly impact zinc toxicity. This study represents a contribution in recognising bioturbating organisms as "ecological engineers" as they directly and indirectly influence metal bioavailability and impact other sediment-inhabiting species. This is significant and should be considered in risk assessment of zinc levels (and other metals) in contaminated sediment

  8. Predicting the bioaccumulation of polyaromatic hydrocarbons and polychlorinated biphenyls in benthic animals in sediments

    Energy Technology Data Exchange (ETDEWEB)

    Tuikka, A.I., E-mail: anitat@student.uef.fi [University of Eastern Finland, Department of Environmental and Biological Sciences, P.O. Box 111, FI-80101 Joensuu (Finland); Leppänen, M.T., E-mail: Matti.T.Leppanen@ymparisto.fi [Finnish Environment Institute, Laboratories/Research and Innovation Laboratory, P.O. Box 35, University of Jyväskylä, FI-40014 Jyväskylä (Finland); Akkanen, J., E-mail: jarkko.akkanen@uef.fi [University of Eastern Finland, Department of Environmental and Biological Sciences, P.O. Box 111, FI-80101 Joensuu (Finland); Sormunen, A.J., E-mail: Arto.Sormunen@mamk.fi [University of Eastern Finland, Department of Environmental and Biological Sciences, P.O. Box 111, FI-80101 Joensuu (Finland); Leonards, P.E.G., E-mail: pim.leonards@vu.nl [Institute for Environmental Studies, Vrije Universiteit Amsterdam, De Boelelaan 1087, 1081 HV Amsterdam (Netherlands); Hattum, B. van, E-mail: bert.vanhattum@deltares.nl [Institute for Environmental Studies, Vrije Universiteit Amsterdam, De Boelelaan 1087, 1081 HV Amsterdam (Netherlands); Vliet, L.A. van, E-mail: lavanvliet@hotmail.com [Ministry of Transport, Public Works and Water Management, National Institute for Coastal and Marine Management/RIKZ, P.O. Box 207, 9750 AE Haren (Netherlands); Brack, W., E-mail: werner.brack@ufz.de [Helmholtz Centre for Environmental Research - UFZ, Department of Effect-Directed Analysis, Permoserstraße 15, 04318 Leipzig (Germany); Smedes, F., E-mail: smedes@recetox.muni.cz [Ministry of Transport, Public Works and Water Management, National Institute for Coastal and Marine Management/RIKZ, P.O. Box 207, 9750 AE Haren (Netherlands); and others

    2016-09-01

    There were two main objectives in this study. The first was to compare the accuracy of different prediction methods for the chemical concentrations of polyaromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) in the organism, based on the measured chemical concentrations existing in sediment dry matter or pore water. The predicted tissue concentrations were compared to the measured ones after 28-day laboratory test using oligochaeta worms (Lumbriculus variegatus). The second objective was to compare the bioaccumulation of PAHs and PCBs in the laboratory test with the in situ bioaccumulation of these compounds. Using the traditional organic carbon-water partitioning model, tissue concentrations were greatly overestimated, based on the concentrations in the sediment dry matter. Use of an additional correction factor for black carbon with a two-carbon model, significantly improved the bioaccumulation predictions, thus confirming that black carbon was important in binding the chemicals and reducing their accumulation. The predicted PAH tissue concentrations were, however, high compared to the observed values. The chemical concentrations were most accurately predicted from their freely dissolved pore water concentrations, determined using equilibrium passive sampling. The patterns of PCB and PAH accumulation in sediments for laboratory-exposed L. variegatus were similar to those in field-collected Lumbriculidae worms. Field-collected benthic invertebrates and L. variegatus accumulated less PAHs than PCBs with similar lipophilicity. The biota to sediment accumulation factors of PAHs tended to decrease with increasing sediment organic carbon normalized concentrations. The presented data yields bioconcentration factors (BCF) describing the chemical water-lipid partition, which were found to be higher than the octanol-water partition coefficients, but on a similar level with BCFs drawn from relevant literature. In conclusion, using the two-carbon model method

  9. Mopane worm allergy in a 36-year-old woman: a case report

    Directory of Open Access Journals (Sweden)

    Letswiti Mavis M

    2010-02-01

    Full Text Available Abstract Introduction The increasing incidence of new diseases as well as changing features of known diseases has partly been attributed to the impact of environmental changes. As a result, there have been calls from health experts for proper surveillance and monitoring of these changes. This is a report of mopane worm allergy in a 36 year old female from the Tswana tribe in Botswana. Mopane worm, the caterpillar stage of Gonimbrasia belina moths, is a seasonal delicacy to people in many communities in southern Africa. As a result, by adulthood, many residents of these communities have had substantial exposure to the worm. Gonimbrasia belina moths belong to the Lepidoptera order of insects. Though some members of this order are known to induce contact allergy, there is no reported incidence of ingestion allergy from mopane worm. Therefore, it is important to track this case for its epidemiological significance and to alert both clinicians and the vulnerable public on the incidence of mopane worm allergy in this region. Case presentation This is a case of a 36 year old woman from the Tswana ethnic group in Botswana, who was diagnosed with food allergy. She presented with itchy skin rash, facial swelling, and mild hypotension after eating mopane worm. She had no previous history of allergic reaction following contact or ingestion of mopane worm and had no atopic illness in the past. She was treated and her symptoms resolved after 4 days. Conclusion The proper management of allergy involves patients' avoidance and clinicians' predictability. Though hypothetical, this report is expected to sensitize clinicians to anticipate and properly manage subsequent occurrence, as well as educate the public in these communities. In addition, tracking new disease patterns, with relationship to environmental changes, will compliment existing evidence in validating the importance of proper environmental surveillance and management.

  10. In vitro and in vivo effects of hesperidin treatment on adult worms of Schistosoma mansoni.

    Science.gov (United States)

    Allam, G; Abuelsaad, A S A

    2014-09-01

    Hesperidin has been reported to exert a wide range of pharmacological effects, including antifungal, antiviral, antioxidant, anti-inflammatory and anticarcinogenic activities. Herein, the schistosomicidal activity of this compound was evaluated in vitro and in vivo. Using an in vitro assay, a concentration of 200 μg/ml of hesperidin resulted in the mortality of 100% adult worms of Schistosoma (S.) mansoni within 72 h and a partial tegumental alteration in 10% of worms. However, after 144 h incubation, 50 and 100 μg/ml concentrations showed 0% and 10% mortality in adult worms, respectively, without any changes to the tegument. Sublethal doses did not influence egg output nor the development of eggs deposited by pairs of adult worms. In an in vivo study, mice infected with S. mansoni and treated with 600 mg hesperidin/kg body weight showed a respective reduction of 50, 45.2, 50 and 47.5% of males, females, worm pairs and total worm burden. In addition, a respective reduction, based on the number of eggs/g tissue, of 41.5, 63.7 and 58.6% was observed in the liver, intestine and liver/intestinal tissue combined. Furthermore, S. mansoni-specific IgG level significantly increased with hesperidin treatment, whereas IgA and IgE levels were not significantly changed. IgM levels decreased in response to cercarial antigen preparation but were not altered in response to soluble worm or soluble egg antigen. As in hesperidin-treated mice, praziquantel-treated mice showed a similar pattern of specific antibody response to S. mansoni antigens. The present study represents the first report on the effects of the schistosomicidal activity of hesperidin.

  11. Modelling benthic biophysical drivers of ecosystem structure and biogeochemical response

    Science.gov (United States)

    Stephens, Nicholas; Bruggeman, Jorn; Lessin, Gennadi; Allen, Icarus

    2016-04-01

    The fate of carbon deposited at the sea floor is ultimately decided by biophysical drivers that control the efficiency of remineralisation and timescale of carbon burial in sediments. Specifically, these drivers include bioturbation through ingestion and movement, burrow-flushing and sediment reworking, which enhance vertical particulate transport and solute diffusion. Unfortunately, these processes are rarely satisfactorily resolved in models. To address this, a benthic model that explicitly describes the vertical position of biology (e.g., habitats) and biogeochemical processes is presented that includes biological functionality and biogeochemical response capturing changes in ecosystem structure, benthic-pelagic fluxes and biodiversity on inter-annual timescales. This is demonstrated by the model's ability to reproduce temporal variability in benthic infauna, vertical pore water nutrients and pelagic-benthic solute fluxes compared to in-situ data. A key advance is the replacement of bulk parameterisation of bioturbation by explicit description of the bio-physical processes responsible. This permits direct comparison with observations and determination of key parameters in experiments. Crucially, the model resolves the two-way interaction between sediment biogeochemistry and ecology, allowing exploration of the benthic response to changing environmental conditions, the importance of infaunal functional traits in shaping benthic ecological structure and the feedback the resulting bio-physical processes exert on pore water nutrient profiles. The model is actively being used to understand shelf sea carbon cycling, the response of the benthos to climatic change, food provision and other societal benefits.

  12. mkk_benthic_habitats - Benthic habitat of the coral reef ecosystem on the south shore of Molokai Hawaii.

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A benthic habitat polygon coverage has been created of the coral reef ecosystem on the south shore of Moloka'i. Polygons were hand-digitized from visual...

  13. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: BENTHIC (Benthic habitat polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains known locations of patchy and continuous seagrass and oyster reef habitat for the Upper Coast of Texas benthic habitat data. This data set...

  14. A shore-based preliminary survey of marine ribbon worms (Nemertea from the Caribbean coast of Colombia

    Directory of Open Access Journals (Sweden)

    Jaime Gonzalez

    2014-09-01

    Full Text Available A checklist of benthic ribbon worm species from the Caribbean coast of Colombia is presented, including synonyms, distributions, a photographic record, and the main morphologic characters of each species for a rapid identification. This is the first research focused broadly on nemerteans in Colombia. 54 specimens of nemerteans were hand-collected from the rocky littoral of two different localities, and identified according to personal experience and specialist literature. 13 species were found; of which 11 represent new records for the country. These species belong to eight different traditionally used families: Tubulanidae, Valenciniidae, Lineidae, Amphiporidae, Cratenemertidae, Emplectonematidae, Drepanophoridae and Ototyphlonemertidae. The most common and abundant species was Dushia atra. The biodiversity of nemerteans in Colombia seems to overlap with the nemertean fauna from Florida and Brazil, explained by the convergence of the North Brazil Current, Guiana Current, Caribbean Currents and the Panama-Colombia Contracurrent in the sampled region. The results of this work suggest that the Caribbean coast of Colombia is a region with a high diversity of nemerteans, and provide important taxonomic data for environmental assessments and future biological research.

  15. The effect of a biologically produced structure on the benthic copepods of a deep-sea site

    Science.gov (United States)

    Thistle, David; Eckman, James E.

    1990-04-01

    In deep-sea soft bottoms, a variety of organisms produce structures that persist for long periods, even after the structures are vacated. It has been hypothesized that these structures are a major source of patchiness in these communities and are important in maintaining the high diversities that characterize the deep sea. Although several studies have shown species' abundances to be correlated with structures, the mechanisms underlying the associations are not known. We attempted to discover these mechanisms, focusing on the responses of benthic copepods to mudballs made by the polychaete Tharyx luticastellus at a site at 1050 m depth in San Diego Trough (32° 52.4'N, 117°45.5'W). It was found that seven out of 40 species responded. Four were more abundant around the structure only when the worm was in residence. These species apparently benefit from some consequences of the worm's presence. Given that bacterial abundance is higher about occupied Tharyx mudballs than nearby controls, it may be that the attractiveness occupied Tharyx mudballs arises from the provision of food. Three species responded to unoccupied mudballs. We measured responses to various types of mudball mimics to determine whether responses were to a habitat provided by the mudball, to a refuge from predation in its vicinity, or to hydrodynamically mediated increases in local food availability. Two of the species appeared to use the mudball as a habitat, the third as a refuge from infaunal predators. The results indicate that biologically produced structures can persist long enough to be viewed as habitat heterogeneity by other species in the community and that this source of patchiness is important to deep-sea species.

  16. Mathematical Model and Geometrical Model of Double Pitch ZN-type Worm Gear Set Based on Generation Mechanism

    Institute of Scientific and Technical Information of China (English)

    SHU Linsen; CAO Huajun; LI Xianchong; ZHANG Chenglong; LI Yuxia

    2015-01-01

    The current researches on the tooth surface mathematical equations and the theory of gearing malnly pay attention to the ordinary type worm gear set (e.g., ZN, ZA, or ZK). The research of forming mechanism and three-dimensional modeling method for the double pitch worm gear set is not enough. So there are some difficulties in mathematical model deducing and geometry modeling of double pitch ZN-type worm gear set based on generation mechanism. In order to establish the mathematical model and the precise geometric model of double pitch ZN-type worm gear set, the structural characteristics and generation mechanism of the double pitch ZN-type worm gear set are investigated. Mathematical model of the ZN-type worm gear set is derived based on its generation mechanism and the theory of gearing. According to the mathematical model of the worm gear set which has been developed, a geometry modeling method of the double pitch ZN-type worm and worm gear is presented. Furthermore, a geometrical precision calculate method is proposed to evaluate the geometrical quality of the double pitch worm gear set. As a result, the maximum error is less than 6´10–4 mm in magnitude, thus the model of the double pitch ZN-type worm gear set is avallable to meet the requirements of finite element analysis and engineering application. The derived mathematical model and the proposed geometrical modeling method are helpful to guiding the design, manufacture and contact analysis of the worm gear set.

  17. Aspects of Benthic Biology in Support of HEBBLE (High Energy Benthic Boundary Layer Experiment).

    Science.gov (United States)

    1985-01-08

    Banis in the Gulf of Mexico (Yingst and Rhoads, in press), and at the Deep station in 40 m of water in Long Island Sound (Aller and Yingst, 1980...community structure in the vicinity of the Texas Flower Gardens, Gulf of Mexico . Estuarine, Coastal, and Shelf 9cience. Young, R.N. and J.B. Southard...tubes of benthic agglutinated foraminifera . Physical properties The vane shear strength is very uniform at 0.4 kPa through the soft brown mud but

  18. WormGender - Open-Source Software for Automatic Caenorhabditis elegans Sex Ratio Measurement.

    Directory of Open Access Journals (Sweden)

    Marta K Labocha

    Full Text Available Fast and quantitative analysis of animal phenotypes is one of the major challenges of current biology. Here we report the WormGender open-source software, which is designed for accurate quantification of sex ratio in Caenorhabditis elegans. The software functions include, i automatic recognition and counting of adult hermaphrodites and males, ii a manual inspection feature that enables manual correction of errors, and iii flexibility to use new training images to optimize the software for different imaging conditions. We evaluated the performance of our software by comparing manual and automated assessment of sex ratio. Our data showed that the WormGender software provided overall accurate sex ratio measurements. We further demonstrated the usage of WormGender by quantifying the high incidence of male (him phenotype in 27 mutant strains. Mutants of nine genes (brc-1, C30G12.6, cep-1, coh-3, him-3, him-5, him-8, skr-1, unc-86 showed significant him phenotype. The WormGender is written in Java and can be installed and run on both Windows and Mac platforms. The source code is freely available together with a user manual and sample data at http://www.QuantWorm.org/. The source code and sample data are also available at http://dx.doi.org/10.6084/m9.figshare.1541248.

  19. Phagocytes: A Holistic Defense and Protection Against Active P2P Worms

    CERN Document Server

    Chen, Ruichuan; Crowcroft, Jon; Tang, Liyong; Chen, Zhong

    2011-01-01

    Active Peer-to-Peer (P2P) worms present serious threats to the global Internet by exploiting popular P2P applications to perform rapid topological self-propagation. Active P2P worms pose more deadly threats than normal scanning worms because they do not exhibit easily detectable anomalies, thus many existing defenses are no longer effective. We propose an immunity system with Phagocytes --- a small subset of elected P2P hosts that are immune with high probability and specialized in finding and "eating" worms in the P2P overlay. The Phagocytes will monitor their managed P2P hosts' connection patterns and traffic volume in an attempt to detect active P2P worm attacks. Once detected, local isolation, alert propagation and software patching will take place for containment. The Phagocytes further provide the access control and filtering mechanisms for communication establishment between the internal P2P overlay and the external hosts. We design a novel adaptive and interaction-based computational puzzle scheme at ...

  20. WormQTL--public archive and analysis web portal for natural variation data in Caenorhabditis spp.

    Science.gov (United States)

    Snoek, L Basten; Van der Velde, K Joeri; Arends, Danny; Li, Yang; Beyer, Antje; Elvin, Mark; Fisher, Jasmin; Hajnal, Alex; Hengartner, Michael O; Poulin, Gino B; Rodriguez, Miriam; Schmid, Tobias; Schrimpf, Sabine; Xue, Feng; Jansen, Ritsert C; Kammenga, Jan E; Swertz, Morris A

    2013-01-01

    Here, we present WormQTL (http://www.wormqtl.org), an easily accessible database enabling search, comparative analysis and meta-analysis of all data on variation in Caenorhabditis spp. Over the past decade, Caenorhabditis elegans has become instrumental for molecular quantitative genetics and the systems biology of natural variation. These efforts have resulted in a valuable amount of phenotypic, high-throughput molecular and genotypic data across different developmental worm stages and environments in hundreds of C. elegans strains. WormQTL provides a workbench of analysis tools for genotype-phenotype linkage and association mapping based on but not limited to R/qtl (http://www.rqtl.org). All data can be uploaded and downloaded using simple delimited text or Excel formats and are accessible via a public web user interface for biologists and R statistic and web service interfaces for bioinformaticians, based on open source MOLGENIS and xQTL workbench software. WormQTL welcomes data submissions from other worm researchers.

  1. Associations among habitat characteristics and meningeal worm prevalence in eastern South Dakota, USA

    Science.gov (United States)

    Jacques, Christopher N.; Jenks, Jonathan A.; Klaver, Robert W.; Dubay, Shelli A.

    2017-01-01

    Few studies have evaluated how wetland and forest characteristics influence the prevalence of meningeal worm (Parelaphostrongylus tenuis) infection of deer throughout the grassland biome of central North America. We used previously collected, county-level prevalence data to evaluate associations between habitat characteristics and probability of meningeal worm infection in white-tailed deer (Odocoileus virginianus) across eastern South Dakota, US. The highest-ranked binomial regression model for detecting probability of meningeal worm infection was spring temperature + summer precipitation + percent wetland; weight of evidence (wi=0.71) favored this model over alternative models, though predictive capability was low (Receiver operating characteristic=0.62). Probability of meningeal worm infection increased by 1.3- and 1.6-fold for each 1-cm and 1-C increase in summer precipitation and spring temperature, respectively. Similarly, probability of infection increased 1.2-fold for each 1% increase in wetland habitat. Our findings highlight the importance of wetland habitat in predicting meningeal worm infection across eastern South Dakota. Future research is warranted to evaluate the relationships between climatic conditions (e.g., drought, wet cycles) and deer habitat selection in maintaining P. tenuis along the western boundary of the parasite.

  2. Benthic algal vegetation in Isfjorden, Svalbard

    Directory of Open Access Journals (Sweden)

    Stein Fredriksen

    2015-08-01

    Full Text Available Benthic algal vegetation was investigated at 10 sites in Isfjorden, Svalbard. Five sites were visited during summer 2010 and five during summer 2012. Both the littoral and sublittoral vegetation were sampled, the littoral by hand-picking and use of a throwable rake and the sublittoral using a triangular dredge. A total of 88 different taxa were registered, comprising 17 Chlorophyta, 40 Ochrophyta, 30 Rhodophyta and the Xantophyceae Vaucheria sp. The green algae Ulvaria splendens (Ruprecht Vinogradova was recorded in Svalbard for the first time. Most of the sites consisted of hard bottom substrate, but one site, Kapp Wijk, consisted of loose-lying calcareous red algae (rhodoliths and had species not recorded elsewhere. The sublittoral at the other sites was dominated by kelp. Molecular analysis confirmed the presence of the red alga Ceramium virgatum and a dwarf form of the brown alga Fucus vesiculosus. This study provides a baseline for future studies investigating changes in the vegetation due to environmental changes.

  3. Morphological characterization of the asexual reproduction in the acorn worm Balanoglossus simodensis.

    Science.gov (United States)

    Miyamoto, Norio; Saito, Yasunori

    2010-09-01

    The acorn worm Balanoglossus simodensis reproduces asexually by fragmentation and subsequent regeneration from the body fragments. We examined the morphogenesis of its asexual reproduction. At first, we collected asexually reproducing specimens and observed their morphogenesis. Then, we succeeded in inducing the asexual reproduction artificially by cutting the worm at the end of the genital region. The process of morphogenesis is completely the same between naturally collected and artificially induced specimens. The stages during morphogenesis were established on the basis of the external features of the asexually reproducing fragments. The internal features of the fragments were also examined at each stage. In a separate phase of the study, the capacity for regeneration of some body parts was also examined by dividing intact worms into about 10 fragments. Although the capacity for regeneration varied among the different body parts, some fragments regenerated into complete individuals in 1 month. The process of regeneration was the same as that in the asexually produced fragments.

  4. Ectopic Human Fasciola hepatica Infection by an Adult Worm in the Mesocolon.

    Science.gov (United States)

    Kim, Ah Jin; Choi, Chang Hwan; Choi, Sun Keun; Shin, Yong Woon; Park, Yun-Kyu; Kim, Lucia; Choi, Suk Jin; Han, Jee Young; Kim, Joon Mee; Chu, Young Chae; Park, In Suh

    2015-12-01

    We report here an ectopic case of Fasciola hepatica infection confirmed by recovery of an adult worm in the mesocolon. A 56-year-old female was admitted to our hospital with discomfort and pain in the left lower quadrant of the abdomen. Abdominal CT showed 3 abscesses in the left upper quadrant, mesentery, and pelvic cavity. On surgical exploration, abscess pockets were found in the mesocolon of the sigmoid colon and transverse colon. A leaf-like worm found in the abscess pocket of the mesocolon of the left colon was diagnosed as an adult fluke of F. hepatica. Histologically, numerous eggs of F. hepatica were noted with acute and chronic granulomatous inflammations in the subserosa and pericolic adipose tissues. Conclusively, a rare case of ectopic fascioliasis has been confirmed in this study by the adult worm recovery of F. hepatica in the mesocolon.

  5. Highly Toxic Ribbon Worm Cephalothrix simula Containing Tetrodotoxin in Hiroshima Bay, Hiroshima Prefecture, Japan

    Directory of Open Access Journals (Sweden)

    Manabu Asakawa

    2013-02-01

    Full Text Available In 1998, during a toxicological surveillance of various marine fouling organisms in Hiroshima Bay, Japan, specimens of the ribbon worm, Cephalothrix simula (Nemertea: Palaeonemertea were found. These ribbon worms contained toxins with extremely strong paralytic activity. The maximum toxicity in terms of tetrodotoxin (TTX was 25,590 mouse units (MU per gram for the whole worm throughout the monitoring period. The main toxic component was isolated and recrystallized from an acidified methanolic solution. The crystalline with a specific toxicity of 3520 MU/mg was obtained and identified as TTX by high performance liquid chromatography (HPLC-fluorescent detection (FLD (HPLC-FLD, electrospray ionization-mass spectrometry (ESI-MS, infrared (IR, nuclear magnetic resonance (NMR and gas chromatography–mass spectrometry (GC-MS. The highest toxicity of C. simula exceeded the human lethal dose per a single worm. A toxicological surveillance of C. simula from 1998 to 2005 indicated approximately 80% of the individuals were ranked as “strongly toxic” (≥1000 MU/g. Forty-eight percent of the specimens possessed toxicity scores of more than 2000 MU/g. Seasonal variations were observed in the lethal potency of C. simula. Specimens collected on January 13, 2000 to December 26, 2000 showed mean toxicities of 665–5300 MU/g (n = 10. These data prompted a toxicological surveillance of ribbon worms from other localities with different habitats in Japan, including Akkeshi Bay (Hokkaido under stones on rocky intertidal beaches, as well as Otsuchi (Iwate among calcareous tubes of serpulid polychaetes on rocky shores. Within twelve species of ribbon worms examined, only C. simula possessed extremely high toxicity. Therefore, C. simula appears to show generally high toxicity irrespective of their locality and habitat.

  6. Eradicating guinea worm without wells: unrealized hopes of the Water Decade.

    Science.gov (United States)

    Brieger, W R; Otusanya, S; Adeniyi, J D; Tijani, J; Banjoko, M

    1997-12-01

    At the start of the United Nations International Drinking Water Supply and Sanitation Decade in the 1980s, guinea worm disease was targeted as the major indicator of the success of the Decade's efforts to promote safe water. By the late 1980s, most of the guinea worm endemic countries in Africa and South Asia had established guinea worm eradication programmes that included water supply as one of their main technical strategies. By surveying the water supply situation in Ifeloju Local Government Area (LGA) in Oyo State, Nigeria, in June 1996, as a case study, it was possible to determine the role that water supply has played in the eradication effort. Although two major agencies, the former Directorate for Food, Roads and Rural Infrastructure and UNICEF, provided hand dug and bore-hole wells respectively in many parts of the LGA, coverage of the smaller farm hamlets has been minor compared to efforts in the larger towns. This is ironic because the farm hamlets served as a reservoir for the disease in the 1980s, such that when the piped water system in the towns broke down, guinea worm was easily reintroduced into the towns. The survey of 188 ever-endemic hamlets with an estimated population of 23,556 found that 74.3% of the people still drink only pond water. Another 11.3% have wells that have become dysfunctional. Only 14.4% of this rural population has access' to functioning wells. Guinea worm was eliminated from 107 of the hamlets mainly by the use of cloth filters and chemical treatment of ponds. While this proves that it is possible to eradicate guinea worm, it fails to leave behind the legacy of reliable, safe water supplies that was the hope of the Water Decade.

  7. Evaluation of existing EPRI and INEL test data to determine the worm to worm gear coefficient of friction in Limitorque actuators

    Energy Technology Data Exchange (ETDEWEB)

    Garza, I.A.

    1996-12-01

    About the last sizing parameter for motor operated valves which has not been determined by utility or NRC sponsored testing is actuator efficiency. A by-product of EPRI testing for valve factors is the measurement of the actuator efficiencies. Motor sizing in this testing provides efficiency testing for motors running near synchronous speed. INEL testing, sponsored by the NRC, for stem factors and rate of loading provides complimentary data for motors loaded down to zero speed. This paper analyzes the data from these two test programs to determine the coefficient of friction for the worm to worm gear interface. This allowed the development of an algorithm for determining the efficiency of actuators which have not been tested. This paper compares the results of this algorithm to the test data to provide a measure of the accuracy of this method for calculating actuator efficiency.

  8. Quo vadis NW Black Sea benthic ecosystems?

    Science.gov (United States)

    Traian Gomoiu, Marian

    2016-04-01

    The author briefly presents a general review on the evolution trends of benthic ecosystems at the Romanian Black Sea coast, referring to some recent data from the literature. The Black Sea represents a "unicum hydrobiologicum" by some of its basic characteristics, such as: 1. a large semi-enclosed basin with an intense exchange of waters; 2. a sea receiving a large amount of fresh water, especially in its northwestern sector, brought by the Danube, Dnieper and Dniester Rivers; 3. a large meromictic sea - euxinic-azoic below depths of 150 - 200 m; 4. around the sea there is a large filter-holding belt consisting of bivalves (Mytilus galloprovincialis and Modiolula phaseolina); 5. a sea having in its northwestern sector a large area covered by red algae of the genus Phyllophora; 6. a sea undergoing, in the last 50 years, intense environmental pressures (pollution by large rivers and direct discharges of wastewater from urban areas, the development of maritime traffic, overfishing by bottom trawling, coastal facilities and especially by many defense works of the new port); 7. a sea registering in the last decades of the past century many events of eutrophication; 8. a sea enriching its biodiversity by alien species. After the political and socio-economic changes triggered by the events of 1989 and especially after Romania's accession to EU, the state of the northwestern Black Sea coastal ecosystems, has recorded positive changes: • Decrease in environmental pressures; • Decreasing pollutant / fertilizing discharges into the Danube; • Reduction of domestic sewage quantities from coastal settlements; • Improvement in the quality of the wastewater discharged into the sea; • Reduction of active fishing by bottom trawling; • Adopting and implementing a national / international set of guidelines concerning marine environment; • Adopting regulations on the protection of the marine environment against pollution in marine economy: transport / shipping, tourism

  9. Evaluation of Echinostoma liei worm, metacercaria and redia antigens for schistosomiasis control.

    Science.gov (United States)

    Abdel-Monaem, G; Farid, A; Rabia, I; El-Amir, A

    2015-10-01

    While chemotherepeutic drugs, such as praziquantel, oxamniquine and metrifonate, are currently considered safe and effective drugs for schistosomiasis treatment, reinfection occurs frequently after drug treatment. Thus, a vaccine is sought to provide long-term treatment. Antigens from worm, metacercaria and redia of Echinostoma liei (E. liei) were purified using CNBr-activated Sepharose column, then used for immunization of mice prior to infection with Schistosomiasis mansoni. Worm burden, hepatic and intestinal eggs and oogram count was significantly reduced and that was reflected in normalization of liver architecture. This referred to a significant increase in the tested immunoglobulin level (IgM, IgG1 and IgG2).

  10. Shells, holes, worms, high-velocity gas and the z-distribution of gas in galaxies.

    Science.gov (United States)

    Rand, R. J.

    The author gives an overview of the current observational understanding of vertically extended gas components in spiral galaxies and the various phenomena which come under such names as shells, holes, worms, and high-velocity gas. For the most part, the focus is on recent high-resolution interferometric studies. The author concentrates on cold gas, and briefly on warm ionized gas, in the Milky Way and a few nearby spirals. Along the way, it is seen how phenomena such as worms and shells may be related to the formation and maintenance of the vertically extended components.

  11. Filament theory based WORM memory devices using aluminum/poly(9-vinylcarbazole)/aluminum structures.

    Science.gov (United States)

    Suresh, Aswin; Krishnakumar, Govind; Namboothiry, Manoj A G

    2014-07-14

    Spin coated poly(N-vinylcarbazole) (PVK) sandwiched between thermally evaporated aluminum (Al) electrodes on a glass substrate showed unipolar Write Once Read Many times (WORM) characteristics. The pristine devices were in the low resistance ON state exhibiting ohmic behavior and at a voltage near -2 V, they switched abruptly to the high resistance OFF state showing space charge limited current (SCLC). We suggest that the rupturing of metallic filaments due to Joule heating may explain the effect. The WORM devices exhibited an ON/OFF ratio of 10(8), a retention of 1000 s and an endurance of ∼10(6) cycles in both ON and OFF states.

  12. In vitro antifilarial effects of three plant species against adult worms of subperiodic Brugia malayi.

    Science.gov (United States)

    Zaridah, M Z; Idid, S Z; Omar, A W; Khozirah, S

    2001-11-01

    Five aqueous extracts from three plant species, i.e., dried husks (HX), dried seeds (SX) and dried leaves (LX) of Xylocarpus granatum (Meliaceae), dried stems (ST) of Tinospora crispa (Menispermaceae) and dried leaves (LA) of Andrographis paniculata (Acanthaceae) were tested in vitro against adult worms of subperiodic Brugia malayi. The relative movability (RM) value of the adult worms over the 24-h observation period was used as a measure of the antifilarial activity of the aqueous extracts. SX extract of X. granatum demonstrated the strongest activity, followed by the LA extract of A. paniculata, ST extract of T. crispa, HX extract and LX extract of X. granatum.

  13. SQL/JavaScript Hybrid Worms As Two-stage Quines

    CERN Document Server

    Orlicki, José I

    2009-01-01

    Delving into present trends and anticipating future malware trends, a hybrid, SQL on the server-side, JavaScript on the client-side, self-replicating worm based on two-stage quines was designed and implemented on an ad-hoc scenario instantiating a very common software pattern. The proof of concept code combines techniques seen in the wild, in the form of SQL injections leading to cross-site scripting JavaScript inclusion, and seen in the laboratory, in the form of SQL quines propa- gated via RFIDs, resulting in a hybrid code injection. General features of hybrid worms are also discussed.

  14. THE EXPERIMENTAL INFECTION OF NECATOR AMERICANUS (HOOK WORM IN GOLDEN HAMSTER, MESOCRICETUS AURATUS

    Directory of Open Access Journals (Sweden)

    H. Khazan

    1996-12-01

    Full Text Available Hook worm (Necator americanus is one of the major pathogenic parasites in the north of Iran. Neonatal hamsters 1-3 days old showed a high degree of susceptibility to Necator americanus infection and the parasite reached to sexually mature stages in six weeks following skin exposure. This method could be used for production of egg, larvae and adult worms. In this study neonatal hamsters were infected each with 70 third – stage larvae percutaneously and 50% of larvae were developed to sexual maturity.

  15. Schistosoma mansoni: effects of anesthetics and antimonial drugs on worm shift in the mouse

    Directory of Open Access Journals (Sweden)

    José Renan da Cunha-Melo

    1986-08-01

    Full Text Available Mice experimentally infected with Schistosoma mansoni were injected with sodium thiopental or sodium antimonyl gluconate (Triostib R, or submitted to halothane inhalation, with or without a previous injection of thiopental. Data obtained showed that halothane and thiopental induce worm shift to the liver (99 and 76%, respectively. Sodium gluconate and antimonium (Triostib R shifted 52% of worms towards the liver. These results seem to indicate that the use of antimonium would be unnecessary, when surgical removal of schistosomules is carried out through the extracorporeal filtration technique, in patients with portal hypertension.

  16. Naturally Ocurring Polyphosphate-accumulating Bacteria in Benthic Biofilms

    Science.gov (United States)

    Locke, N. A.; Saia, S. M.; Walter, M. T.; Carrick, H. J.; Buda, A. R.; Regan, J. M.

    2014-12-01

    Polyphosphate accumulating organisms (PAOs), known to store excess phosphorus (P) as polyphosphate (poly-P), influence P transport in the environment. Enhanced biological phosphorus removal (EBPR) from wastewater has long served as a basis to study bacterial PAOs, yet little research has genetically identified similar organisms in natural settings. Aerobic/anaerobic cycles, used to select for PAOs in EBPR, can result from changing environmental conditions such as night/day cycles for benthic biofilms. Benthic biofilms from eight Pennsylvanian streams were studied for naturally-occurring bacterial PAOs similar to those typically found in EBPR systems. PAOs were confirmed in the benthic biofilms by a characteristic yellow fluorescent emission from DAPI staining. Cells containing yellow fluorescence were separated from the rest of the sample using a flow cytometer, resulting in a physically enriched culture of PAOs from the benthic biofilms. Amplicon-based metagenomic sequencing will reveal the phylogeny of bacteria responsible for poly-P accumulation in these benthic biofilms. Sequencing data will be used to develop fluorescent in-situ hybridization (FISH) probes, and hybridizations will be performed on DAPI-stained cells to confirm poly-P accumulation by targeted phylotypes. Identifying PAOs in natural settings is a critical step towards studying environments that support high concentrations of PAOs, serving as significant factors in the P cycle. PAOs can then be connected to P transport models to help understand and mitigate P pollution in agricultural watersheds.

  17. Biology and ecology of the ``Pompeii worm'' (Alvinella pompejana Desbruyères and Laubier), a normal dweller of an extreme deep-sea environment: A synthesis of current knowledge and recent developments

    Science.gov (United States)

    Desbruyères, D.; Chevaldonné, P.; Alayse, A.-M.; Jollivet, D.; Lallier, F. H.; Jouin-Toulmond, C.; Zal, F.; Sarradin, P.-M.; Cosson, R.; Caprais, J.-C.; Arndt, C.; O'Brien, J.; Guezennec, J.; Hourdez, S.; Riso, R.; Gaill, F.; Laubier, L.; Toulmond, A.

    1998-01-01

    Alvinella pompejana, the "Pompeii worm" lives on active hydrothermal edifices at deep-sea vents of the East Pacific Rise. The physical and chemical patterns of its microhabitat were determined from temperature probe measurements, temperature time series, and on-board and shore-based chemical analyses based on discrete sampling (pH, H 2S, CO 2, CH 4, S 2O 2-3, Ca, Mg, Cu, Cd, Zn). The microhabitat is characterised by high temporal and microscale spatial variability, with temperature values in the range of 20°-45°C at the immediate periphery of tubes but reaching higher, still undetermined, values inside the tubes. The difference observed between in vitro temperature limits for the stability of biomolecules and metabolic rates, and suggested in situ conditions seems to indicate a significant protective role of biological interfaces (tubes and cuticle). Temporal instability possibly also plays an important role in the ability for these worms to colonise such an extreme habitat. The functional role of dominant epibiotic bacteria is discussed in the light of recent biochemical and molecular data: the tube-worm-bacteria system can be considered as a symbiotic entity where carbon is probably metabolised and recycled. Sulphide detoxification occurs by oxidation at the gill level and possibly at the intracellular haemoglobin level. Heavy metals, ingested or absorbed, are trapped in spherocrystals and bound to metallothionein-like proteins. Anatomical, physiological and molecular adaptations to hypoxia allow the worm to successfully colonise the chimneys. A. pompejana lives in an ephemeral environment and must reproduce and disperse accordingly. It is a gonochoric species that displays a pseucopulatory behaviour allowing transfer of sperm to female spermathecae, thus avoiding dispersion of the gametes. The size of the oocytes suggests a lecithotrophic or benthic development. The population size structure is polymodal, indicating discontinuous recruitment. Population

  18. Immediate response of meio and macrobenthos to disturbance caused by a benthic disturber

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Ansari, Z.A.; Matondkar, S.G.P.; Rodrigues, N.

    The probable impact of nodule mining on benthic biota was studied by creating a benthic disturbance. During the predisturbance study in the Central Indian Basin, box core samples were analyzed for the distribution, composition and abundance...

  19. Linkages between reef fish demographics and benthic habitat characteristics in Tutuila, American Samoa

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats play vital roles in the distribution and abundances of marine resources. Understanding how fish populations respond to variability of benthic...

  20. Agar Sediment Test for Assessing the Suitability of Organic Waste Streams for Recovering Nutrients by the Aquatic Worm Lumbriculus variegatus

    NARCIS (Netherlands)

    Laarhoven, Bob; Elissen, H.J.H.; Temmink, H.; Buisman, C.J.N.

    2016-01-01

    An agar sediment test was developed to evaluate the suitability of organic waste streams from the food industry for recovering nutrients by the aquatic worm Lumbriculus variegatus (Lv). The effects of agar gel, sand, and food quantities in the sediment test on worm growth, reproduction, and water qu

  1. Identification of threshold body burdens of metals for the protection of the aquatic ecological status using two benthic invertebrates.

    Science.gov (United States)

    Bervoets, Lieven; De Jonge, Maarten; Blust, Ronny

    2016-03-01

    In this study accumulated concentrations of As, Cd, Cr, Cu, Ni, Pb and Zn in two benthic invertebrate taxa, Chironomus sp. and Tubificidae are related to ecological responses expressed as changes in macro invertebrate communities. In addition critical body burdens were estimated above which ecological quality was always lower than a certain threshold. Data from existing studies on bioaccumulation of the metals in both taxa were combined with different biological water quality indices. For all metal-endpoint combinations threshold values could be calculated above which ecological quality was always low. Safe threshold body burdens could be estimated for both species for all metals although the data set was more extended for Chrionomus sp. with estimated threshold values being 65, 3.2, 10, 57, 6.5, 73 and 490 μg/g dw for As, Cd, Cr, Cu, Ni, Pb and Zn. This study demonstrated that metal accumulation in resistant species such as chironomids and tubificid worms have the potential to be used as predictors of ecological effects in aquatic ecosystems. However, the estimated threshold values have to be validated and supported by more lines of evidence before they can be used by regulators.

  2. Fish stomach contents in benthic macroinvertebrate assemblage assessments

    Directory of Open Access Journals (Sweden)

    TH. Tupinambás

    Full Text Available The choice of sampling gears to assess benthic macroinvertebrate communities depends on environmental characteristics, study objectives, and cost effectiveness. Because of the high foraging capacity and diverse habitats and behaviors of benthophagous fishes, their stomach contents may offer a useful sampling tool in studies of benthic macroinvertebrates, especially in large, deep, fast rivers that are difficult to sample with traditional sediment sampling gear. Our objective was to compare the benthic macroinvertebrate communities sampled from sediments with those sampled from fish stomachs. We collected benthic macroinvertebrates and fish from three different habitat types (backwater, beach, riffle in the wet season, drying season, and dry season along a single reach of the Grande River (Paraná River Basin, southeast Brazil. We sampled sediments through use of a Petersen dredge (total of 216 grabs and used gill nets to sample fish (total of 36 samples. We analyzed the stomach contents of three commonly occurring benthophagous fish species (Eigenmannia virescens, Iheringichthys labrosus, Leporinus amblyrhynchus. Chironomids dominated in both sampling methods. Macroinvertebrate taxonomic composition and abundances from fish stomachs differed from those from sediment samples, but less so from riffles than from backwater and beach habitats. Macroinvertebrate taxa from E. virescens stomachs were more strongly correlated with sediment samples from all three habitats than were those from the other two species. The species accumulation curves and higher mean dispersion values, compared with with sediment samples suggest that E. virescens is more efficient than sediment samples and the other fish studied at collecting benthic taxa. We conclude that by analyzing the stomach contents of benthophagous fishes it is possible to assess important characteristics of benthic communities (dispersion, taxonomic composition and diversity. This is especially true

  3. Benthic Flux of Dissolved Nickel into the Water Column of South San Francisco Bay

    Science.gov (United States)

    2001-01-01

    Phosphorous (N:P) Benthic Flux Ratio Fig. 9 – Incubation Core Design Fig. 10 – Macroinvertebrate Taxonomy Fig. 11 – Benthic Chlorophyll Analyses Fig...l a r F l u x R a t i o Redfield Ratio Incubation Core Design Fig. 9 Benthic Macroinvertebrate Taxonomy Fig. 10 Benthic Chlorophyll...98 25-May-99 08-Apr-98 15-Sep-98 25-May-99 Phylum Mollusca Class Bivalvia Potamocorbula amurensis 520 303 195 Musculista senhousia 43 130 Mya

  4. Preliminary results from a shallow water benthic grazing study

    Science.gov (United States)

    Jones, N.L.; Monismith, Stephen G.; Thompson, Janet K.

    2005-01-01

    The nutrient-rich, shallow waters of San Francisco Bay support high rates of primary production, limited not by nutrients but by light availability and benthic grazing (Alpine and others 1992; Cloern 1982). Phytoplankton blooms are an important food source for upper trophic levels. Consequently animal populations, such as fish, may suffer under conditions of high benthic bivalve grazing. It has been hypothesized that several species of fish are suffering as a result of severe decreases in available phytoplankton since the introduction of Potamocorbula amurensis into San Francisco Bay (Feyrer 2003).

  5. Controlling benthic release of phosphorus in different Baltic Sea scales

    DEFF Research Database (Denmark)

    Pitkänen, Heikki; Bendtsen, Jørgen; Hansen, Jørgen L. S.;

    to counteract anoxia and benthic release of nutrients in coastal marine conditions in the Baltic Sea. The project undertook monitoring of the pilot tests, modelling of effects at different scales, risk management, cost effectiveness and cost benefit analysis.......The general aim of the PROPPEN project was to study whether it is possible to counteract near-bottom anoxia and excess benthic nutrient release ("internal loading") in the Baltic Sea by artificial oxygenation in cost-efficient and socio-economically beneficial ways. Two pilot sites were selected...

  6. Production by intertidal benthic animals and limits to their predation by shorebirds : a heuristic model

    NARCIS (Netherlands)

    Piersma, Theunis

    1987-01-01

    This review examines the question whether the cumulative amount of benthic biomass removed by feeding shorebirds on a certain intertidal area is limited by the renewal rate of benthic food stocks. Limitations of current methods to estimate both predatory impact by shorebirds and harvestable benthic

  7. In-vitro antihelmintic effects of two Kenyan plant extracts against Heamonchus contortus adult worms

    Directory of Open Access Journals (Sweden)

    Patrick Gachoki Kareru

    2012-10-01

    Full Text Available This study was on evidence based information that Entada leptostachya Harms and Rapanea rhododendroides (Gil Mez were used by the herbalists in Mbeere County, Kenya, for the treatment of gastrointestinal worms. The plants’ aqueous and solvent extracts were tested for their in-vitro antihelmintic activity against Haemonchus contortus adult worms. Of the eight plant extracts investigated, four extracts exhibited adult worm mortality greater than 50% while the other four afforded mortality ranging between 60-77%. E. leptostachya methanol extract was the most active (77%. Albendazole was used as a positive control drug while Goodwin’s physiological solution was used as negative control. Methanol extracts for both plants exhibited the highest anthelmintic activity at the test concentrations of 25mg/ml. Although R. rhododendroides was ranked third in general usage by the herbalists, E. leptostachya was solely used for the treatment of intestinal worms. The present results demonstrated that E. leptostachya and R. rhododendroides plant extracts had antihelmintic agents, and justified their traditional use as alternative drugs for the treatment of heamonchosis in ruminants.

  8. Dracunculiasis (guinea worm disease) in the Bume (Nyangaton) people of South Omo, Ethiopia.

    Science.gov (United States)

    Jemaneh, L; Taticheff, S

    1993-07-01

    A village-to-village search for active dracunculiasis cases was carried out in an endemic area of the Bume (Nyangaton) tribe of South Omo Region, Ethiopia. A total of 21 cases, of which 6, 5, and 10 had pre-emergent, emergent and complicated Guinea worm disease, respectively, were identified. Twenty-two worms, ranging from 1-3 per patient, were removed mainly from the lower limbs; worm appearance seems to be associated more with the right limb. Adults between the ages of 20-30 years are highly affected and infection appears to be sex-related as 14/21 (66.7%) of the cases are females. Water procured from water-holes drug in dry river beds provides an ideal situation for the transmission of dracunculiasis amongst the tribesmen. The knowledge, attitudes and perceptions of the Bume people towards the disease and the public health significance of dracunculiasis are discussed in relation to the current goal of the national and global Guinea worm eradication programme.

  9. Worm Algorithm simulations of the hole dynamics in the t-J model

    Science.gov (United States)

    Prokof'ev, Nikolai; Ruebenacker, Oliver

    2001-03-01

    In the limit of small J 0.4t there is an ongoing argument that at smaller J spin-charge separation is still possible. Worm algorithm Monte Carlo simulations of the hole Green function for 0.1 hole spectral function in the thermodynamic limit.

  10. Bore holes and the vanishing of guinea worm disease in Ghana's upper region.

    Science.gov (United States)

    Hunter, J M

    1997-07-01

    Ghana's Upper Region provides an excellent example of the beneficial effects of improved water security provided by hand-pump tube wells. Following a Ghana-Canada bilateral development project that installed some 2500 pumps, protection rates against guinea worm disease may be estimated as 88% in the west, and 96% in the east. Survey comparisons between ca 1960 and 1990 show that dracunculiasis declined in 32 of a total of 38 areas. The shadow of guinea worm has been lifted from the land and, in many areas, a true "vanishing" has occurred. The few areas of disease increase are characterized by the lowest population densities, pioneer settlement for cotton farming, and an absence of bore holes. Vagaries of development have inadvertently produced disease transformations or "metamorphoses" from dracunculiasis to elephantiasis (lymphatic filariasis) in one area, and to red water disease (schistosomiasis hematobium) in other areas. Correlative associations between pump densities and guinea worm disease are weakened by the large size of areas for which disease is reported in 1990. One preliminary finding is that geographical distance to the pump is a stronger influence than demographic pressure on pumps, regarding dracunculiasis. Diminishing returns on higher pump densities in many areas support the idea of making fuller, safer use of supplementary non-pump water. Despite crises of fee payment and pump maintenance, the rural bore hole project has struck a mortal blow against guinea worm, and permanently raised the quality of life in the Upper Region.

  11. A New Method for Machining Concave Profile of the Worms' Thread

    Directory of Open Access Journals (Sweden)

    Tareq Abu Shreehah

    2010-09-01

    Full Text Available Research and development of wormgear drives have significantly focused on their geometrical accuracy, loadability tests, and their wear resistance and efficiency. The research has been going on in several directions. Individual method of problem solving is development new worm-gear sets and tools for their manufacturing. In the present study, worms with concave profile of their thread have been considered. To avoid the technological difficulties relevant to the application of special cutting tools for machining such gear sets, a rigid incongruent generating pair consisting of a standard hob and toroidal tool has been developed for processing the concave worm profile. The generating surface of the developed toroidal tool, which is essential for the tool manufacturing, was modeled on the basis of hob-toroidal tool interaction. The proposed method of modeling w as divided into three steps: first, the common surface for both hobbing and toroidal tools has been found in terms of hyperboloid of revolution of one sheet, then, the matrix method of transforming the coordinates, from the hob-axis reference frame to the toroidal tool-axis reference frame, has been utilized, and finally, an equation described the generating surface of the toroidal tool has been derived and presented. By using the proposed model and the obtained final equation the worm thread surface machined by the mentioned tool can be defined and experimented.

  12. Isoforms of Hsp70-binding human LDL in adult Schistosoma mansoni worms.

    Science.gov (United States)

    Pereira, Adriana S A; Cavalcanti, Marília G S; Zingali, Russolina B; Lima-Filho, José L; Chaves, Maria E C

    2015-03-01

    Schistosoma mansoni is one of the most common parasites infecting humans. They are well adapted to the host, and this parasite's longevity is a consequence of effective escape from the host immune system. In the blood circulation, lipoproteins not only help to conceal the worm from attack by host antibodies but also act as a source of lipids for S. mansoni. Previous SEM studies showed that the low-density lipoprotein (LDL) particles present on the surface of adult S. mansoni worms decreased in size when the incubation time increased. In this study, immunocytochemical and proteomic analyses were used to locate and identify S. mansoni binding proteins to human plasma LDL. Ultrathin sections of adult worms were cut transversely from the anterior, medial and posterior regions of the parasite. Immunocytochemical experiments revealed particles of gold in the tegument, muscle region and spine in male worms and around vitelline cells in females. Immunoblotting and 2D-electrophoresis using incubations with human serum, anti-LDL antibodies and anti-chicken IgG peroxidase conjugate were performed to identify LDL-binding proteins in S. mansoni. Analysis of the binding proteins using LC-MS identified two isoforms of the Hsp70 chaperone in S. mansoni. Hsp70 is involved in the interaction with apoB in the cytoplasm and its transport to the endoplasmic reticulum. However, further studies are needed to clarify the functional role of Hsp70 in S. mansoni, mainly related to the interaction with human LDL.

  13. "Kill the Army Worms! Let Them Live!:" Facing an Ecological Dilemma in a Democratic Classroom Community.

    Science.gov (United States)

    Wister, Pam; Beaton, Kathy; Nason, Pam

    2000-01-01

    Describes how a primary teacher handled an argument among her students over what to do about army worms defoliating an apple tree, thereby illustrating how she cultivates a classroom community that nurtures democracy. Such stories of morally coherent practices counter the bureaucratic insistence on a narrowly construed outcomes-based education.…

  14. Integrated CD-ROM and WORM Optical Disk Systems on the Navy's Paperless Ship.

    Science.gov (United States)

    Thiel, Thomas J.

    1992-01-01

    The integration of optical disk systems employing WORM (Write Once Read Many) technology with CD-ROM systems can enhance information management. Two integrated system applications are the Paperless Ship Project of the U.S. Navy and the FEDLOG (Federal Logistics Data on CD-ROM) of the Defense Logistics Agency. These initiatives are described and…

  15. Impact of worm predation on pseudo-steady-state of the circulating fluidized bed biofilm reactor.

    Science.gov (United States)

    Li, Ming; Nakhla, George; Zhu, Jesse

    2013-01-01

    This paper studies integrated simultaneous carbon and nitrogen removal as well as worm predation, in a circulating fluidized bed biofilm reactor (CFBBR) operated with an anoxic-aerobic bioparticle recirculation. A lab-scale CFBBR with a 8.5-liter reaction zone comprising 2L anoxic and 6.5L aerobic compartments was designed to evaluate the aquatic Oligochaete worm effect. Long-term (200 days) performance showed that stable and high-rate chemical oxygen demand (COD) with sodium acetate as the carbon source and total nitrogen (NH(4)Cl as nitrogen source) conversions were achieved simultaneously, with low sludge production of 0.082 g VSS (volatile suspended solids) g COD(-1) at pseudo-steady-state. Worm predation, which causes considerable sludge reduction of the bioparticle process, was studied. The results proved that the worm predation has a significant impact on the pseudo-steady-state performance of the CFBBR, decreasing biomass yield, decreasing oxygen concentration and increasing expanded bed height.

  16. Bar-tailed Godwits Limosa l. lapponica eat polychaete worms wherever they winter in Europe

    NARCIS (Netherlands)

    Duijns, Sjoerd; Hidayati, Nur Annis; Piersma, Theunis

    2013-01-01

    Capsule: Across the European wintering range Bar-tailed Godwits Limosa lapponica lapponica selected polychaete worms and especially Ragworms Hediste diversicolor, with differences between areas due to variations in prey availability. Aims: To determine the diet of Bar-tailed Godwits across their win

  17. Persistent corneal edema secondary to presumed dead adult filarial worm in the anterior chamber

    Directory of Open Access Journals (Sweden)

    Basak Samar

    2007-01-01

    Full Text Available We present three cases of persistent corneal edema secondary to presumed dead adult filarial worms lying in the anterior chamber with their attachment to the endothelium. Two of them were initially diagnosed as descemet′s fold with corneal edema. Two patients underwent penetrating keratoplasty and in one case, surgical removal was partly possible with clearing of cornea.

  18. Glycogen metabolism in Schistosoma mansoni worms after their isolation from the host

    NARCIS (Netherlands)

    Tiolens, A.G.M.; Bergh, S.G. van den

    1987-01-01

    Adult Schistosoma mansoni worms rapidly degrade their endogenous glycogen stores immediately after isolation from the host. In NCTC 109 or in a diphasic culture medium the glycogen levels slowly recovered again after the initial decrease. The rapid degradation of glycogen could be prevented, even in

  19. WormQTL—public archive and analysis web portal for natural variation data in Caenorhabditis spp

    NARCIS (Netherlands)

    Snoek, L.B.; Velde, van der K.J.; Arends, D.; Li, Y.; Beyer, A.; Elvin, M.; Fisher, J.; Hajnal, A.; Hengartner, M.; Poulin, G.; Rodriguez Sanchez, M.; Schmid, T.; Schrimpf, S.; Xue, F.; Jansen, R.C.; Kammenga, J.E.; Swertz, M.A.

    2013-01-01

    Here, we present WormQTL (http://www.wormqtl.org), an easily accessible database enabling search, comparative analysis and meta-analysis of all data on variation in Caenorhabditis spp. Over the past decade, Caenorhabditis elegans has become instrumental for molecular quantitative genetics and the sy

  20. WormQTL-public archive and analysis web portal for natural variation data in Caenorhabditis spp

    NARCIS (Netherlands)

    Snoek, L. Basten; Van der Velde, K. Joeri; Arends, Danny; Li, Yang; Beyer, Antje; Elvin, Mark; Fisher, Jasmin; Hajnal, Alex; Hengartner, Michael O.; Poulin, Gino B.; Rodriguez, Miriam; Schmid, Tobias; Schrimpf, Sabine; Xue, Feng; Jansen, Ritsert C.; Kammenga, Jan E.; Swertz, Morris A.

    2013-01-01

    Here, we present WormQTL (http://www.wormqtl.org), an easily accessible database enabling search, comparative analysis and meta-analysis of all data on variation in Caenorhabditis spp. Over the past decade, Caenorhabditis elegans has become instrumental for molecular quantitative genetics and the sy

  1. Host-induced morphological changes of Schistosoma mansoni Sambon, 1907 male worms

    Directory of Open Access Journals (Sweden)

    José Roberto Machado-Silva

    1994-09-01

    Full Text Available In order to evaluate the permissiveness of Nectomys squamipes to Schistosoma mansoni and the influence of the albino mice on the morphological aspects of adult worms derived from a population isolated from N. squamipes, the morphology of adult S. mansoni Sambon, 1907 male worms was studied using a digital image analyser (MOP VIDEOPLAN and light microscopy. Their sources were as follows: (1 recovered from the wild rodent N. squamipes Brants naturally infected from Sumidouro, RJ, Brazil; (2 recovered from albino mice experimentally infected with the strain derived from N. squamipes; (3 recovered after the isolation of a strain derived from aboriginal human infections in Sumidouro. Worms recovered from N. squamipes (group 1 showed body lenght and distance between suckers significantly bigger than those of the specimens maintained in mice (groups 2 and 3. The number of tests in group 1 was statistically less than of groups 2 and 3. Group 2 strains which were maintained in mice, presented the lenght of the worms as the only significant different character. Data show that: (1 N. squamipes is a more suitable host for the development of S. mansoni when compared to the albino mice; (2 a strain of S. mansoni isolated from a natural host undergoes morphological changes after its passage in the white mouse.

  2. Morphometric study of Schistosoma mansoni adult worms recovered from undernourished infected mice

    Directory of Open Access Journals (Sweden)

    Sheilla A Oliveira

    2003-07-01

    Full Text Available Some unfavourable effects of malnutrition of the host on Schistosoma mansoni worm biology and structure have been reported based upon brigthfield microscopy. This paper aims to study by morphometric techniques, some morphological parameters in male and female adult worms recovered from undernourished albino mice in comparison with parasites recovered from well-fed infected mice. Undernourished animals were fed a multideficient and essentially low protein diet (RBD diet and compared to well-fed control mice fed with the commercial diet NUVILAB. Seventy-five days post-infection with 80 cercarie (BL strain animals were sacrificed. All adult worms were fixed in 10% formalin and stained with carmine chloride. One hundred male and 60 female specimens from each group (undernourished and control were examined using an image system analysis Leica Quantimet 500C and the Sigma Scan Measurement System. The following morphometrical parameters were studied: body length and width, oral and ventral suckers, number and area of testicular lobes, length and width of ovary and uterine egg. For statistical analysis, the Student's t test for unpaired samples was applied. Significant differences (p < 0.05 were detected in body length and width, in parameters of suckers, uterine egg width, ovary length and area of testicular lobes, with lower values for specimens from undernourished mice. The nutritional status of the host has negative influence on S. mansoni adult worms, probably through unavailability of essential nutrients to the parasites.

  3. Development of Schistosoma mansoni worms in mice analyzed by bright field and confocal microscopy

    Directory of Open Access Journals (Sweden)

    Carla de Lamare Biolchini

    2006-10-01

    Full Text Available The blood flukes of mammals (Digenea: Schistosomatidae are among trematodes unique whose adult worms have separeted sexes which are dissimilar in appearance. The developmental features, growth and organogenesis of Schistosoma mansoni were studied in Swiss Webster mice by a digital system for image analysis and confocal microscopy. Data so far obtained showed two phases with significative morphological changes at 3-4 weeks post-infection, and a gradual similar development onwards in the reproductive system and tegument. Our male-dependent phase demonstrated that mating occurs before sexual maturing. At week three, the majority of male worms (59% had formed the gynaecophoric canal although testicular lobes and tegumental tubercles were absent. By this time, 33% females had an incipient ovary (without cellular differentiation. At week four, 77.2% males presented testicular lobes with few germinative cells while 26% had developing tegumental tubercles. The immature ovary was observed in 69% females. Suckers followed different pattern of growth between male and females. The size of oral and ventral suckers from six-week-old male worms grew abruptly (3.0 fold more than that of three-week-old. In female worms, maximum growth was attained at week four, reducing in size thereafter. From sixth week onwards, all specimens showed the fully developed reproductive system. Probably, these features are morphological traits which schistosome has experienced from hermaphrodite to dioecy.

  4. Molecular phylogeny of echiuran worms (Phylum: Annelida reveals evolutionary pattern of feeding mode and sexual dimorphism.

    Directory of Open Access Journals (Sweden)

    Ryutaro Goto

    Full Text Available The Echiura, or spoon worms, are a group of marine worms, most of which live in burrows in soft sediments. This annelid-like animal group was once considered as a separate phylum because of the absence of segmentation, although recent molecular analyses have placed it within the annelids. In this study, we elucidate the interfamily relationships of echiuran worms and their evolutionary pattern of feeding mode and sexual dimorphism, by performing molecular phylogenetic analyses using four genes (18S, 28S, H3, and COI of representatives of all extant echiuran families. Our results suggest that Echiura is monophyletic and comprises two unexpected groups: [Echiuridae+Urechidae+Thalassematidae] and [Bonelliidae+Ikedidae]. This grouping agrees with the presence/absence of marked sexual dimorphism involving dwarf males and the paired/non-paired configuration of the gonoducts (genital sacs. Furthermore, the data supports the sister group relationship of Echiuridae and Urechidae. These two families share the character of having anal chaetae rings around the posterior trunk as a synapomorphy. The analyses also suggest that deposit feeding is a basal feeding mode in echiurans and that filter feeding originated once in the common ancestor of Urechidae. Overall, our results contradict the currently accepted order-level classification, especially in that Echiuroinea is polyphyletic, and provide novel insights into the evolution of echiuran worms.

  5. A case of Fasciola hepatica infection mimicking cholangiocarcinoma and ITS-1 sequencing of the worm.

    Science.gov (United States)

    Kang, Bong Kyun; Jung, Bong-Kwang; Lee, Yoon Suk; Hwang, In Kyeom; Lim, Hyemi; Cho, Jaeeun; Hwang, Jin-Hyeok; Chai, Jong-Yil

    2014-04-01

    Fascioliasis is a zoonotic infection caused by Fasciola hepatica or Fasciola gigantica. We report an 87-year-old Korean male patient with postprandial abdominal pain and discomfort due to F. hepatica infection who was diagnosed and managed by endoscopic retrograde cholangiopancreatography (ERCP) with extraction of 2 worms. At his first visit to the hospital, a gallbladder stone was suspected. CT and magnetic retrograde cholangiopancreatography (MRCP) showed an intraductal mass in the common bile duct (CBD) without proximal duct dilatation. Based on radiological findings, the presumed diagnosis was intraductal cholangiocarcinoma. However, in ERCP which was performed for biliary decompression and tissue diagnosis, movable materials were detected in the CBD. Using a basket, 2 living leaf-like parasites were removed. The worms were morphologically compatible with F. hepatica. To rule out the possibility of the worms to be another morphologically close species, in particular F. gigantica, 1 specimen was processed for genetic analysis of its ITS-1 region. The results showed that the present worms were genetically identical (100%) with F. hepatica but different from F. gigantica.

  6. WormBase: network access to the genome and biology of Caenorhabditis elegans.

    Science.gov (United States)

    Stein, L; Sternberg, P; Durbin, R; Thierry-Mieg, J; Spieth, J

    2001-01-01

    WormBase (http://www.wormbase.org) is a web-based resource for the Caenorhabditis elegans genome and its biology. It builds upon the existing ACeDB database of the C.elegans genome by providing data curation services, a significantly expanded range of subject areas and a user-friendly front end.

  7. Correlates of Anaemia and Worm Infestation among Rural Pregnant Women: A Cross Sectional Study from Bengal

    Directory of Open Access Journals (Sweden)

    Sinjita Dutta, Sita Chatterjee, Debasish Sinha, Bobby Pal, Mausumi Basu, Aparajita Dasgupta

    2013-01-01

    Objectives: To find out the preva-lence of worm infestation and anaemia among pregnant women along with their socio-demographic characteristics, dietary habits and state of personal hygiene and elicit the association, if any, with anemia and worm infestation Materials and methods: A cross-sectional study was carried out among pregnant mothers attending the antenatal clinic at Nasibpur Union Health Center. All antenatal mothers who came for antenatal checkup for the first time to the health centre on two prefixed days of the week during the study period were interviewed. The reports of their stool and haemoglobin examination were followed up. Results: 82% of the pregnant women were suffering from anemia.25% of the study population had worm infestation. Age at marriage, green leafy vegetable, fruit and flesh food intake of at least 4 days a week, use of lemon with food most of the time, avoiding the practice of eating last in the family, handwashing with soap and water before eating and use of footwear outside the house were statically significant with hemoglobin concentration. Only religion and handwashing practice with soap and water before eating had statistically significant association with worm infestation. Conclusion: The study showed that certain protective factors like diet and personal hygiene if addressed at the time of antenatal checkup can reduce the number of cases of anemia significantly.

  8. Intestinal epithelial cell secretion of RELM-beta protects against gastrointestinal worm infection

    Science.gov (United States)

    IL-4 and IL-13 protect against parasitic helminths, but little is known about the mechanism of host protection. We show that IL-4/IL-13 confer immunity against worms by inducing intestinal epithelial cells (IEC) to differentiate into goblet cells that secrete resistin-like molecule beta (RELMB). R...

  9. The impact of the Cyanamid Canada Co. discharges to benthic invertebrates in the Welland River in Niagara falls, Canada.

    Science.gov (United States)

    Dickman, M; Rygiel, G

    1993-06-01

    : In 1986, the International Joint Commission (IJC) recommended that the Niagara River watershed should be declared an Area of Concern (AOC). This IJC recommendation was ratified by the 4 signatories of the Great Lakes Water Quality Agreement. In order to delist an AOC, it is necessary to locate any areas of impairment within the watershed and carry out remediation projects that permit uses that were previously impaired. To this end we attempted to determine whether or not the sediments at 7 study sites near the Cyanamid Canada (Chemical) Co. were contaminated at levels that would result in the impairment of the natural biota which inhabit the watershed.The Cyanamid Canada (Chemical) Co. discharges ammonia wastes, cyanide, arsenic and a variety of heavy metals into treatment systems which ultimately discharge to the Welland River, the major Canadian tributary to the Niagara River. This portion of the Welland River near the factory was designated a Provincially significant (Class one) wetlands by the Ontario Ministry of Natural Resources. In 1986, the mean discharge to a creek from Cyanamid Canada Co. was 27,342 m(3) per day (MOE, 1987). Similar discharge volumes occurred in 1989. In 1991, the total discharge was 25,000 m(3) per day (MOE, 1991).The majority of the benthic invertebrates collected from the study area were pollution tolerant taxa (e.g., sludge worms constituted 68% of all the organisms collected). The lowest chironomid densities were observed at stations 1, 2, and 4, which were the only stations situated close to Cyanamid's discharge pipes. The absence, of clams and mayflies which burrow to greater depths than do chironomids and sludge worms, probably reflects the inability of the deeper dwelling burrowers to tolerate the contaminants which we recorded at these 3 stations. The absence of all crustaceans from these same 3 stations (stations 1, 2 and 4) when coupled with their low biotic diversity and the elevated heavy metal concentrations in the

  10. The further application of MTT-formazan colorimetry to studies on filarial worm viability.

    Science.gov (United States)

    Comley, J C; Townson, S; Rees, M J; Dobinson, A

    1989-09-01

    Experiments have confirmed that MTT-formazan colorimetry in its simplest form (incubation of intact worms with MTT and direct visualisation of any formazan formed) can be readily applied to several species of filariae including Onchocerca volvulus. Data is presented which will assist the development of quantitative MTT reduction viability tests for a selection of the smaller filarial species. Assays of pieces of Onchocerca gutturosa and O. volvulus females have led us to tentatively conclude that the tips of filariae, particularly the anterior ends, may well be metabolically the most active part of the worm. Selective sampling of these regions for Onchocerca might therefore be a useful indicator for the viability of the parasite. An example of how MTT-formazan colorimetry has been applied to yield additional data to support motility observations on the in vitro survival of male O. gutturosa is also given. The in vitro timecourse of worm death caused by 10 microM CGP 20376 on Acanthocheilonema viteae females has been examined by MTT reduction and compared with 6 other non-subjective parameters. The results suggests that the parameters examined could be divided into two groups according to the time taken for CGP 20376 to cause 50% inhibition (t50) of the parameter. Fast response parameters had t50's between 1 and 6 h (motility indices, 14CO2 evolution, adenine uptake and leucine uptake), they are more sensitive measures of viability and indicate possible worm damage which may or may not be reversible. Slow response parameters had t50's between 34 and 48.5 h (lactate output, MTT reduction and adenine leakage), and are probably linked with severe degenerative changes and are indicative of worm death.(ABSTRACT TRUNCATED AT 250 WORDS)

  11. Here, There and Everywhere: The Radiolar Eyes of Fan Worms (Annelida, Sabellidae).

    Science.gov (United States)

    Bok, Michael J; Capa, María; Nilsson, Dan-Eric

    2016-11-01

    Fan worms (Annelida: Sabellidae) possess some of the strangest eyes in nature. Their eponymous fans are composed of two sets of radiolar tentacles that project from the head up out of the worm's protective tube into the water column. Primarily used for respiration and feeding, these radioles are also often involved in photoreception. They display a surprising diversity of eyes of varying levels of sophistication, ranging from scattered single ocelli to compound eyes with up to hundreds of facets. These photoreceptors could represent a relatively recent evolutionary development to cope with a sessile, tube-dwelling lifestyle, and the primary cerebral eyes (haplessly positioned within the tube most of the time) amount to little more than minute pigment cups with scant visual potential. The radiolar eyes on the other hand, appear to function as visual burglar alarms for detecting looming predators and eliciting a startle response for the worm to rapidly retreat within its fortified tube. Despite sometimes resembling arthropod compound eyes, the radiolar photoreceptors have many canonically vertebrate-like physiological characteristics. Considering the unusual and apparently recently evolved nature of the fan worm radiolar photoreceptors, these animals are an excellent case for examining the emergence of novel visual systems, the development of rudimentary visually guided behaviors, and the function of distributed sensory systems. Here, we review over 100 years of investigations into the anatomical diversity of sabellid radiolar photoreceptors and eyes in an evolutionary and functional context. We provide new information on radiolar eye structure in several species of fan worms, and we attempt to organize the various eye types and ocellar structures into meaningful hierarchies. We discuss the developmental, evolutionary, and functional significance of the radiolar eyes and highlight areas of future interest in deciphering their unique nature.

  12. Relationship between pulmonary arterial pressure and pulmonary thromboembolism associated with dead worms in canine heartworm disease.

    Science.gov (United States)

    Hirano, Y; Kitagawa, H; Sasaki, Y

    1992-10-01

    To examine effects of thromboemboli due to dead worms on pulmonary arterial pressure (PAP), 20 to 50 dead heartworms were inserted into the pulmonary arteries of 4 heartworm uninfected dogs (uninfected group) and 11 dogs infected with heartworms (infected group). In the uninfected group, the mean PAP rose 1 week after worm insertion (10.9 to 166. mmHg), but it recovered by the 4th week. Clinical signs, hemodynamics and blood gas findings also deteriorated at the 1st week, but recovered at the 4th week. Angiographic and pathological findings indicated that blood flow recovered through the spaces between thromboemboli and vessel walls at the 4th week. The infected dogs were divided into three groups. In the infected-I group (5 dogs), the intimal lesions of the pulmonary arteries were slight, and clinical and laboratory findings showed changes similar to those of the uninfected group. In the infected-II group (4 dogs), the pulmonary arterial lesions were severe and the mean PAP was higher (25.7 mmHg) than in the uninfected group before worm insertion. An increase in PAP (34.1 mmHg) and worsening of clinical and laboratory findings were noticed till the 4th week. Thromboemboli adhered extensively to the vessel walls. Two dogs in the infected-III group died of severe dyspnea on the 9th and 10th day, and the mean PAP rose remarkably at the 1st week (from 19.4 to 28.2 mmHg). Severe pulmonary parenchymal lesions with edema or perforation were observed. From the above results, it was clarified that effects of dead worms on PAP and clinical signs depended on the severity of pulmonary arterial lesions before worm insertion.(ABSTRACT TRUNCATED AT 250 WORDS)

  13. WormSizer: high-throughput analysis of nematode size and shape.

    Directory of Open Access Journals (Sweden)

    Brad T Moore

    Full Text Available The fundamental phenotypes of growth rate, size and morphology are the result of complex interactions between genotype and environment. We developed a high-throughput software application, WormSizer, which computes size and shape of nematodes from brightfield images. Existing methods for estimating volume either coarsely model the nematode as a cylinder or assume the worm shape or opacity is invariant. Our estimate is more robust to changes in morphology or optical density as it only assumes radial symmetry. This open source software is written as a plugin for the well-known image-processing framework Fiji/ImageJ. It may therefore be extended easily. We evaluated the technical performance of this framework, and we used it to analyze growth and shape of several canonical Caenorhabditis elegans mutants in a developmental time series. We confirm quantitatively that a Dumpy (Dpy mutant is short and fat and that a Long (Lon mutant is long and thin. We show that daf-2 insulin-like receptor mutants are larger than wild-type upon hatching but grow slow, and WormSizer can distinguish dauer larvae from normal larvae. We also show that a Small (Sma mutant is actually smaller than wild-type at all stages of larval development. WormSizer works with Uncoordinated (Unc and Roller (Rol mutants as well, indicating that it can be used with mutants despite behavioral phenotypes. We used our complete data set to perform a power analysis, giving users a sense of how many images are needed to detect different effect sizes. Our analysis confirms and extends on existing phenotypic characterization of well-characterized mutants, demonstrating the utility and robustness of WormSizer.

  14. Benthic processes affecting contaminant transport in Upper Klamath Lake, Oregon

    Science.gov (United States)

    Kuwabara, James S.; Topping, Brent R.; Carter, James L.; Carlson, Rick A; Parchaso, Francis; Fend, Steven V.; Stauffer-Olsen, Natalie; Manning, Andrew J.; Land, Jennie M.

    2016-09-30

    Executive SummaryMultiple sampling trips during calendar years 2013 through 2015 were coordinated to provide measurements of interdependent benthic processes that potentially affect contaminant transport in Upper Klamath Lake (UKL), Oregon. The measurements were motivated by recognition that such internal processes (for example, solute benthic flux, bioturbation and solute efflux by benthic invertebrates, and physical groundwater-surface water interactions) were not integrated into existing management models for UKL. Up until 2013, all of the benthic-flux studies generally had been limited spatially to a number of sites in the northern part of UKL and limited temporally to 2–3 samplings per year. All of the benthic invertebrate studies also had been limited to the northern part of the lake; however, intensive temporal (weekly) studies had previously been completed independent of benthic-flux studies. Therefore, knowledge of both the spatial and temporal variability in benthic flux and benthic invertebrate distributions for the entire lake was lacking. To address these limitations, we completed a lakewide spatial study during 2013 and a coordinated temporal study with weekly sampling of benthic flux and benthic invertebrates during 2014. Field design of the spatially focused study in 2013 involved 21 sites sampled three times as the summer cyanobacterial bloom developed (that is, May 23, June 13, and July 3, 2013). Results of the 27-week, temporally focused study of one site in 2014 were summarized and partitioned into three periods (referred to herein as pre-bloom, bloom and post-bloom periods), each period involving 9 weeks of profiler deployments, water column and benthic sampling. Partitioning of the pre-bloom, bloom, and post-bloom periods were based on water-column chlorophyll concentrations and involved the following date intervals, respectively: April 15 through June 10, June 17 through August 13, and August 20 through October 16, 2014. To examine

  15. Benthic Species Richness of U.S. Pacific Estuaries

    Science.gov (United States)

    Understanding the spatial distribution of biodiversity is of paramount importance due to the potential consequences of its loss on human welfare. We demonstrate that biodiversity of soft-bottomed estuarine benthic organisms can be predicted with relatively high accuracy at multi...

  16. Benthic primary production and mineralization in a High Arctic Fjord

    DEFF Research Database (Denmark)

    Attard, Karl M.; Hancke, Kasper; Sejr, Mikael K.;

    2016-01-01

    Coastal and shelf systems likely exert major influence on Arctic Ocean functioning, yet key ecosystem processes remain poorly quantified. We employed the aquatic eddy covariance (AEC) oxygen (O2) flux method to estimate benthic primary production and mineralization in a High Arctic Greenland fjord...

  17. BENTHIC MACROFAUNA-HABITAT RELATIONSHIPS IN TWO PACIFIC NORTHWEST ESTUARIES

    Science.gov (United States)

    Habitat-based ecological risk assessments rely, in part, on estimates of the ecological value of the habitats at risk. As part of a larger programmatic effort to estimate estuarine habitat values, we determined benthic macrofauna-habitat relationships for 8 intertidal habitats i...

  18. Benthic fauna around Mauritius island, southwest Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Ansari, Z.A; Parulekar, A

    was concentrated in the top 4 cm depth of the sediment. Benthic biomass showed a general decline with an increase of water depth, and correlated positively with the chl-a of the surface water. The macro:meiofaunal biomass ratio indicated dominance of meiofauna...

  19. Synthesis of benthic flux components in the Patos Lagooncoastal zone, Rio Grande do Sul, Brazil

    Science.gov (United States)

    King, Jeffrey N.

    2012-01-01

    The primary objective of this work is to synthesize components of benthic flux in the Patos Lagoon coastal zone, Rio Grande do Sul, Brazil. Specifically, the component of benthic discharge flux forced by the terrestrial hydraulic gradient is 0.8 m3 d-1; components of benthic discharge and recharge flux associated with the groundwater tidal prism are both 2.1 m3 d-1; components of benthic discharge and recharge flux forced by surface-gravity wave setup are both 6.3 m3 d-1; the component of benthic discharge flux that transports radium-228 is 350 m3 d-1; and components of benthic discharge and recharge flux forced by surface-gravity waves propagating over a porous medium are both 1400 m3 d-1. (All models are normalized per meter shoreline.) Benthic flux is a function of components forced by individual mechanisms and nonlinear interactions that exist between components. Constructive and destructive interference may enhance or diminish the contribution of benthic flux components. It may not be possible to model benthic flux by summing component magnitudes. Geochemical tracer techniques may not accurately model benthic discharge flux or submarine groundwater discharge (SGD). A conceptual model provides a framework on which to quantitatively characterize benthic discharge flux and SGD with a multifaceted approach.

  20. Orbital forcing of deep-sea benthic species diversity

    Science.gov (United States)

    Cronin, T. M.; Raymo, M.E.

    1997-01-01

    Explanations for the temporal and spatial patterns of species biodiversity focus on stability-time, disturbance-mosaic (biogenic microhabitat heterogeneity) and competition-predation (biotic interactions) hypotheses. The stability-time hypothesis holds that high species diversity in the deep sea and in the tropics reflects long-term climatic stability. But the influence of climate change on deep-sea diversity has not been studied and recent evidence suggests that deep-sea environments undergo changes in climatically driven temperature and flux of nutrients and organic-carbon during glacial-interglacial cycles. Here we show that Pliocene (2.85-2.40 Myr) deep-sea North Atlantic benthic ostracod (Crustacea) species diversity is related to solar insolation changes caused by 41,000-yr cycles of Earth's obliquity (tilt). Temporal changes in diversity, as measured by the Shannon- Weiner index, H(S), correlate with independent climate indicators of benthic foraminiferal oxygen-isotope ratios (mainly ice volume) and ostracod Mg:Ca ratios (bottomwater temperature). During glacial periods, H(S) = 0.2-0.6, whereas during interglacials, H(S) = 1.2-1.6, which is three to four times as high. The control of deep-sea benthic diversity by cyclic climate change at timescales of 103-104 yr does not support the stability-time hypothesis because it shows that the deep sea is a temporally dynamic environment. Diversity oscillations reflect large-scale response of the benthic community to climatically driven changes in either thermohaline circulation, bottom temperature (or temperature-related factors) and food, and a coupling of benthic diversity to surface productivity.

  1. A Robust Cross-Linking Strategy for Block Copolymer Worms Prepared via Polymerization-Induced Self-Assembly

    Science.gov (United States)

    2016-01-01

    A poly(glycerol monomethacrylate) (PGMA) chain transfer agent is chain-extended by reversible addition–fragmentation chain transfer (RAFT) statistical copolymerization of 2-hydroxypropyl methacrylate (HPMA) with glycidyl methacrylate (GlyMA) in concentrated aqueous solution via polymerization-induced self-assembly (PISA). A series of five free-standing worm gels is prepared by fixing the overall degree of polymerization of the core-forming block at 144 while varying its GlyMA content from 0 to 20 mol %. 1H NMR kinetics indicated that GlyMA is consumed much faster than HPMA, producing a GlyMA-rich sequence close to the PGMA stabilizer block. Temperature-dependent oscillatory rheological studies indicate that increasing the GlyMA content leads to progressively less thermoresponsive worm gels, with no degelation on cooling being observed for worms containing 20 mol % GlyMA. The epoxy groups in the GlyMA residues can be ring-opened using 3-aminopropyltriethoxysilane (APTES) in order to prepare core cross-linked worms via hydrolysis-condensation with the siloxane groups and/or hydroxyl groups on the HPMA residues. Perhaps surprisingly, 1H NMR analysis indicates that the epoxy–amine reaction and the intermolecular cross-linking occur on similar time scales. Cross-linking leads to stiffer worm gels that do not undergo degelation upon cooling. Dynamic light scattering studies and TEM analyses conducted on linear worms exposed to either methanol (a good solvent for both blocks) or anionic surfactant result in immediate worm dissociation. In contrast, cross-linked worms remain intact under such conditions, provided that the worm cores comprise at least 10 mol % GlyMA. PMID:27134311

  2. Phototoxicity of TiO2 nanoparticles to a freshwater benthic amphipod: are benthic systems at risk?

    Science.gov (United States)

    This study investigated phototoxicity of TiO2 nanoparticles (nano-TiO2) to a freshwater benthic amphipod (Hyalella azteca) using 48-h and 96-h bioassays. Thorough monitoring of particle interactions with exposure media (Lake Superior water, LSW) and the surface of organisms was p...

  3. From the worm to the pill, the parasitic worm product ES-62 raises new horizons in the treatment of rheumatoid arthritis.

    Science.gov (United States)

    Pineda, M A; Eason, R J; Harnett, M M; Harnett, W

    2015-04-01

    Evidence from human studies suggests that parasitic worm infection can protect humans against rheumatoid arthritis (RA) and this idea is strengthened by data generated in model systems. Although therapeutic use of parasitic worms is currently being explored, there are obvious benefits in pursuing drug development through identification and isolation of the 'active ingredients'. ES-62 is a secreted glycoprotein of the filarial nematode Acanthocheilonema viteae, which we have found to protect against the development of collagen-induced arthritis (CIA) in mice. ES-62 activity is dependent on the inflammatory phenotype of the local environment and protection arises via inhibition of Th17- and γδT cell-dependent IL-17 production. At the same time, NK and NK T cell IL-17 production is left intact, and such selectivity suggests that ES-62 might make a particularly attractive therapeutic for RA. However, as a potentially immunogenic protein, ES-62 is unsuitable for development as a drug. Nevertheless, ES-62 activity is dependent on covalently attached phosphorylcholine (PC) residues and we have therefore produced a library of PC-based drug-like ES-62 small-molecule analogues (SMAs) as an alternative therapeutic strategy. Screening this library, we have found an ES-62 SMA that mirrors ES-62 in protecting against CIA and by the same IL-17-dependent mechanism of action.

  4. Acute phase proteins in dogs naturally infected with the Giant Kidney Worm (Dioctophyme renale)

    DEFF Research Database (Denmark)

    Schmidt, Elizabeth M. S.; Kjelgaard-Hansen, Mads; Thomas, Funmilola

    2016-01-01

    Background: Dioctophyme renale is a nematode parasite of dogs, usually found in the right kidney, causing severe damage to the renal parenchyma. Objectives: The objective was to evaluate the acute phase response in dogs naturally infected with this Giant Kidney Worm and the possible effects...... of parasites and APP concentrations. Conclusion: There is a particular acute phase response profile in dogs with kidney worm infection. Nephrectomy induced a short-term inflammatory process....... and Friedman test were used for multiple comparisons; the Wilcoxon-signed rank test was used to compare variables, and Spearman’s rho rank test was used to assess the correlation between the number of parasites recovered from the dogs and the APP concentration. Results: Forty-five parasites were recovered from...

  5. Effects of Boundary Condition and Helix Angle On Meshing Performance of TI Worm Gearing

    Institute of Scientific and Technical Information of China (English)

    SUN Yue-hai; DUAN Lu-qian; WANG Shu-ren; ZHANG Ce

    2006-01-01

    To exactly describe the contact state and contact area oftooth surface oftoroidalinvolute(TI) worm gearing.the authors introduced boundary condition into contact line analysis.With helix angle chosen as parameter,the criterion for the existence of meshing boundary line on the surface of TI worm gearing is derived.Results show that there can be four situations for meshing boundary line on the tooth surface of gear.namely,inexistence of meshing boundary line.a unique line,two lines,and two coincident lines.If the helix angle is equal to or slightly smaller than the bigger angle,which makes two meshing boundary lines superpose,a preferable meshing performance is obtained.Computer simulation proves the validity Of the above conclusion.

  6. Hooking some stem-group "worms": fossil lophotrochozoans in the Burgess Shale.

    Science.gov (United States)

    Butterfield, Nicholas J

    2006-12-01

    The fossil record plays a key role in reconstructing deep evolutionary relationships through its documentation of the early diverging stem groups leading to extant phyla. In the middle Cambrian Burgess Shale, two famously problematic worms, Odontogriphus and Wiwaxia, have recently been reinterpreted as stem-group molluscs based on their shared expression of a putative radula and putative ctenidia in Odontogriphus. More detailed analysis of these fossil structures, however, reveals pronounced anatomical and histological discrepancies with molluscan analogues, such that they are more reliably interpreted as primitive features of the superphylum Lophotrochozoa. In the absence of any obviously derived characters, Odontogriphus could be placed in the stem group of the Lophotrochozoa or on the stem of any of its constituent phyla, whereas the dorsal covering of chaetae in Wiwaxia identifies it as a stem-group polychaete. Despite their close relationship, these two jawed, segmented worms could conceivably represent the early stages of two separate phyla.

  7. Chordodes ferox, a new record of horsehair worms (Nematomorpha, Gordiida) from South Africa

    Science.gov (United States)

    Schmidt-Rhaesa, Andreas; Perissinotto, Renzo

    2016-01-01

    Abstract Three females and one male specimen of a previously unconfirmed species of horsehair worms (Nematomorpha) from South Africa are described using Scanning Electron Microscopy. The females correspond to the description of Chordodes ferox Camerano, 1897, a species previously described from the Democratic Republic of the Congo (Congo-Kinshasa) and an adjacent, not further specified region of the Republic of Congo (Congo-Brazzaville). Characteristic is the presence of enlarged and elevated simple areoles around the base of a thorn areole, in combination with further cuticular characters. This is the latest of a total of six species of horsehair worms reported from South Africa so far. Two species of praying mantids, Polyspilota aeruginosa (Goeze, 1778) and Sphodromantis gastrica Stål, 1858, have been identified as hosts of Chordodes ferox, while its distribution range in the region and the period of adult emergence from the host remain largely unknown. PMID:27047243

  8. Effects of sediment-spiked lufenuron on benthic macroinvertebrates in outdoor microcosms and single-species toxicity tests

    Energy Technology Data Exchange (ETDEWEB)

    Brock, T.C.M., E-mail: theo.brock@wur.nl [Alterra, Wageningen University and Research Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands); Bas, D.A. [Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam (Netherlands); Belgers, J.D.M. [Alterra, Wageningen University and Research Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands); Bibbe, L. [Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam (Netherlands); Boerwinkel, M-C.; Crum, S.J.H. [Alterra, Wageningen University and Research Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands); Diepens, N.J. [Department of Aquatic Ecology and Water Quality Management, Wageningen University, P.O. Box 47, 6700 AA Wageningen (Netherlands); Kraak, M.H.S.; Vonk, J.A. [Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam (Netherlands); Roessink, I. [Alterra, Wageningen University and Research Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands)

    2016-08-15

    Highlights: • In outdoor microcosms constructed with lufenuron-spiked sediment we observed that this insecticide persistent in the sediment compartment. • Sediment exposure to lufenuron caused population-level declines (insects and crustaceans) and increases (mainly oligochaete worms) of benthic invertebrates. • The direct and indirect effects observed in the microcosms were supported by results of sediment-spiked single species tests with Chironomus riparius, Hyalella azteca and Lumbriculus variegatus. • The tier-1 effect assessment procedure for sediment organisms recommended by the European Food Safety Authority is protective for the treatment-related responses observed in the microcosm test. - Abstract: Sediment ecotoxicity studies were conducted with lufenuron to (i) complement the results of a water-spiked mesocosm experiment with this lipophilic benzoylurea insecticide, (ii) to explore the predictive value of laboratory single-species tests for population and community-level responses of benthic macroinvertebrates, and (iii) to calibrate the tier-1 effect assessment procedure for sediment organisms. For this purpose the concentration-response relationships for macroinvertebrates between sediment-spiked microcosms and those of 28-d sediment-spiked single-species toxicity tests with Chironomus riparius, Hyalella azteca and Lumbriculus variegatus were compared. Lufenuron persisted in the sediment of the microcosms. On average, 87.7% of the initial lufenuron concentration could still be detected in the sediment after 12 weeks. Overall, benthic insects and crustaceans showed treatment-related declines and oligochaetes treatment-related increases. The lowest population-level NOEC in the microcosms was 0.79 μg lufenuron/g organic carbon in dry sediment (μg a.s./g OC) for Tanytarsini, Chironomini and Dero sp. Multivariate analysis of the responses of benthic macroinvertebrates revealed a community-level NOEC of 0.79 μg a.s./g OC. The treatment

  9. Proteome adaptation to high temperatures in the ectothermic hydrothermal vent Pompeii worm.

    Directory of Open Access Journals (Sweden)

    Didier Jollivet

    Full Text Available Taking advantage of the massive genome sequencing effort made on thermophilic prokaryotes, thermal adaptation has been extensively studied by analysing amino acid replacements and codon usage in these unicellular organisms. In most cases, adaptation to thermophily is associated with greater residue hydrophobicity and more charged residues. Both of these characteristics are positively correlated with the optimal growth temperature of prokaryotes. In contrast, little information has been collected on the molecular 'adaptive' strategy of thermophilic eukaryotes. The Pompeii worm A. pompejana, whose transcriptome has recently been sequenced, is currently considered as the most thermotolerant eukaryote on Earth, withstanding the greatest thermal and chemical ranges known. We investigated the amino-acid composition bias of ribosomal proteins in the Pompeii worm when compared to other lophotrochozoans and checked for putative adaptive changes during the course of evolution using codon-based Maximum likelihood analyses. We then provided a comparative analysis of codon usage and amino-acid replacements from a greater set of orthologous genes between the Pompeii worm and Paralvinella grasslei, one of its closest relatives living in a much cooler habitat. Analyses reveal that both species display the same high GC-biased codon usage and amino-acid patterns favoring both positively-charged residues and protein hydrophobicity. These patterns may be indicative of an ancestral adaptation to the deep sea and/or thermophily. In addition, the Pompeii worm displays a set of amino-acid change patterns that may explain its greater thermotolerance, with a significant increase in Tyr, Lys and Ala against Val, Met and Gly. Present results indicate that, together with a high content in charged residues, greater proportion of smaller aliphatic residues, and especially alanine, may be a different path for metazoans to face relatively 'high' temperatures and thus a novelty

  10. Proteome adaptation to high temperatures in the ectothermic hydrothermal vent Pompeii worm.

    Science.gov (United States)

    Jollivet, Didier; Mary, Jean; Gagnière, Nicolas; Tanguy, Arnaud; Fontanillas, Eric; Boutet, Isabelle; Hourdez, Stéphane; Segurens, Béatrice; Weissenbach, Jean; Poch, Olivier; Lecompte, Odile

    2012-01-01

    Taking advantage of the massive genome sequencing effort made on thermophilic prokaryotes, thermal adaptation has been extensively studied by analysing amino acid replacements and codon usage in these unicellular organisms. In most cases, adaptation to thermophily is associated with greater residue hydrophobicity and more charged residues. Both of these characteristics are positively correlated with the optimal growth temperature of prokaryotes. In contrast, little information has been collected on the molecular 'adaptive' strategy of thermophilic eukaryotes. The Pompeii worm A. pompejana, whose transcriptome has recently been sequenced, is currently considered as the most thermotolerant eukaryote on Earth, withstanding the greatest thermal and chemical ranges known. We investigated the amino-acid composition bias of ribosomal proteins in the Pompeii worm when compared to other lophotrochozoans and checked for putative adaptive changes during the course of evolution using codon-based Maximum likelihood analyses. We then provided a comparative analysis of codon usage and amino-acid replacements from a greater set of orthologous genes between the Pompeii worm and Paralvinella grasslei, one of its closest relatives living in a much cooler habitat. Analyses reveal that both species display the same high GC-biased codon usage and amino-acid patterns favoring both positively-charged residues and protein hydrophobicity. These patterns may be indicative of an ancestral adaptation to the deep sea and/or thermophily. In addition, the Pompeii worm displays a set of amino-acid change patterns that may explain its greater thermotolerance, with a significant increase in Tyr, Lys and Ala against Val, Met and Gly. Present results indicate that, together with a high content in charged residues, greater proportion of smaller aliphatic residues, and especially alanine, may be a different path for metazoans to face relatively 'high' temperatures and thus a novelty in thermophilic

  11. On accretion of dark energy onto black- and worm-holes

    OpenAIRE

    Madrid, José A. Jiménez; Martín-Moruno, Prado

    2010-01-01

    We review some of the possible models that are able to describe the current Universe which point out the future singularities that could appear. We show that the study of the dark energy accretion onto black- and worm-holes phenomena in these models could lead to unexpected consequences, allowing even the avoidance of the considered singularities. We also review the debate about the approach used to study the accretion phenomenon which has appeared in literature to demonstrate the advantages ...

  12. Synergy of Omeprazole and Praziquantel In Vitro Treatment against Schistosoma mansoni Adult Worms

    Science.gov (United States)

    Anderson, Leticia; Venancio, Thiago M.; Nakaya, Helder I.; Miyasato, Patrícia A.; Rofatto, Henrique K.; Zerlotini, Adhemar; Nakano, Eliana; Oliveira, Guilherme; Verjovski-Almeida, Sergio

    2015-01-01

    Background Treatment and morbidity control of schistosomiasis relies on a single drug, praziquantel (PZQ), and the selection of resistant worms under repeated treatment is a concern. Therefore, there is a pressing need to understand the molecular effects of PZQ on schistosomes and to investigate alternative or synergistic drugs against schistosomiasis. Methodology We used a custom-designed Schistosoma mansoni expression microarray to explore the effects of sublethal doses of PZQ on large-scale gene expression of adult paired males and females and unpaired mature females. We also assessed the efficacy of PZQ, omeprazole (OMP) or their combination against S. mansoni adult worms with a survival in vitro assay. Principal Findings We identified sets of genes that were affected by PZQ in paired and unpaired mature females, however with opposite gene expression patterns (up-regulated in paired and down-regulated in unpaired mature females), indicating that PZQ effects are heavily influenced by the mating status. We also identified genes that were similarly affected by PZQ in males and females. Functional analyses of gene interaction networks were performed with parasite genes that were differentially expressed upon PZQ treatment, searching for proteins encoded by these genes whose human homologs are targets of different drugs used for other diseases. Based on these results, OMP, a widely prescribed proton pump inhibitor known to target the ATP1A2 gene product, was chosen and tested. Sublethal doses of PZQ combined with OMP significantly increased worm mortality in vitro when compared with PZQ or OMP alone, thus evidencing a synergistic effect. Conclusions Functional analysis of gene interaction networks is an important approach that can point to possible novel synergistic drug candidates. We demonstrated the potential of this strategy by showing that PZQ in combination with OMP displayed increased efficiency against S. mansoni adult worms in vitro when compared with

  13. Response to "Discussion on the systematic position of the Early Cambrian priapulomorph worms"

    Institute of Scientific and Technical Information of China (English)

    HAN Jian; HU Shixue

    2006-01-01

    @@ Due to the combination of complex states of preservation and taphonomies in Chengjiang fossils, Huang et al.[1] expressed different opinions to those of Han et al.[2] on the morphology and systematic position of the fossil priapulomorph worms (Priapulomorpha) based on their additional materials. These diverse opinions are critical in any investigation of the diversity of the Introverta in the Cambrian explosion. However, some of their ideas need to be discussed in further detail.

  14. Anthelmintic activity in vivo of epiisopiloturine against juvenile and adult worms of Schistosoma mansoni.

    Science.gov (United States)

    Guimarães, Maria A; de Oliveira, Rosimeire N; Véras, Leiz M C; Lima, David F; Campelo, Yuri D M; Campos, Stefano Augusto; Kuckelhaus, Selma A S; Pinto, Pedro L S; Eaton, Peter; Mafud, Ana C; Mascarenhas, Yvonne P; Allegretti, Silmara M; de Moraes, Josué; Lolić, Aleksandar; Verbić, Tatjana; Leite, José Roberto S A

    2015-03-01

    Schistosomiasis is a serious disease currently estimated to affect more that 207 million people worldwide. Due to the intensive use of praziquantel, there is increasing concern about the development of drug-resistant strains. Therefore, it is necessary to search for and investigate new potential schistosomicidal compounds. This work reports the in vivo effect of the alkaloid epiisopiloturine (EPI) against adults and juvenile worms of Schistosoma mansoni. EPI was first purified its thermal behavior and theoretical solubility parameters charaterised. In the experiment, mice were treated with EPI over the 21 days post-infection with the doses of 40 and 200 mg/kg, and 45 days post-infection with single doses of 40, 100 and 300 mg/kg. The treatment with EPI at 40 mg/kg was more effective in adult worms when compared with doses of 100 and 300 mg/kg. The treatment with 40 mg/kg in adult worms reduced parasite burden significantly, lead to reduction in hepatosplenomegaly, reduced the egg burden in faeces, and decreased granuloma diameter. Scanning electron microscopy revealed morphological changes to the parasite tegument after treatment, including the loss of important features. Additionally, the in vivo treatment against juvenile with 40 mg/kg showed a reduction of the total worm burden of 50.2%. Histopathological studies were performed on liver, spleen, lung, kidney and brain and EPI was shown to have a DL50 of 8000 mg/kg. Therefore EPI shows potential to be used in schistosomiasis treatment. This is the first time that schistosomicidal in vivo activity of EPI has been reported.

  15. Composting Organic Kitchen Waste with Worms for Sustainable Kitchen Waste Management

    Directory of Open Access Journals (Sweden)

    Mehali J. Mehta

    2014-03-01

    Full Text Available India produces around 3000 million tons of organic waste annually. This huge volume of waste(s comes from agriculture, urban and industrial sources and also from domestic activities. Utilization of this waste material for productivity process is important for both economical and environmental reasons. In the present study an effort has been made to assess the efficacy of E. foetida (red tiger worm in utilizing the kitchen waste material, to analyse the waste decomposition process assessed with earthworm activity.

  16. The Vicious Worm: a computer-based Taenia solium education tool.

    Science.gov (United States)

    Johansen, Maria Vang; Trevisan, Chiara; Braae, Uffe Christian; Magnussen, Pascal; Ertel, Rebekka Lund; Mejer, Helena; Saarnak, Christopher F L

    2014-08-01

    Ignorance is a major obstacle for the effective control of diseases. To provide evidence-based knowledge about prevention and control of Taenia solium cysticercosis, we have developed a computer-based education tool: 'The Vicious Worm'. The tool targets policy makers, professionals, and laypeople, and comprises educational materials including illustrated short stories, videos, and scientific texts designed for the different target groups. We suggest that evidence-based health education is included as a specific control measure in any control programme.

  17. The barber's pole worm CAP protein superfamily--A basis for fundamental discovery and biotechnology advances.

    Science.gov (United States)

    Mohandas, Namitha; Young, Neil D; Jabbar, Abdul; Korhonen, Pasi K; Koehler, Anson V; Amani, Parisa; Hall, Ross S; Sternberg, Paul W; Jex, Aaron R; Hofmann, Andreas; Gasser, Robin B

    2015-12-01

    Parasitic worm proteins that belong to the cysteine-rich secretory proteins, antigen 5 and pathogenesis-related 1 (CAP) superfamily are proposed to play key roles in the infection process and the modulation of immune responses in host animals. However, there is limited information on these proteins for most socio-economically important worms. Here, we review the CAP protein superfamily of Haemonchus contortus (barber's pole worm), a highly significant parasitic roundworm (order Strongylida) of small ruminants. To do this, we mined genome and transcriptomic datasets, predicted and curated full-length amino acid sequences (n=45), undertook systematic phylogenetic analyses of these data and investigated transcription throughout the life cycle of H. contortus. We inferred functions for selected Caenorhabditis elegans orthologs (including vap-1, vap-2, scl-5 and lon-1) based on genetic networking and by integrating data and published information, and were able to infer that a subset of orthologs and their interaction partners play pivotal roles in growth and development via the insulin-like and/or the TGF-beta signalling pathways. The identification of the important and conserved growth regulator LON-1 led us to appraise the three-dimensional structure of this CAP protein by comparative modelling. This model revealed the presence of different topological moieties on the canonical fold of the CAP domain, which coincide with an overall charge separation as indicated by the electrostatic surface potential map. These observations suggest the existence of separate sites for effector binding and receptor interactions, and thus support the proposal that these worm molecules act in similar ways as venoms act as ligands for chemokine receptors or G protein-coupled receptor effectors. In conclusion, this review should guide future molecular studies of these molecules, and could support the development of novel interventions against haemonchosis.

  18. Anthelmintic activity in vivo of epiisopiloturine against juvenile and adult worms of Schistosoma mansoni.

    Directory of Open Access Journals (Sweden)

    Maria A Guimarães

    2015-03-01

    Full Text Available Schistosomiasis is a serious disease currently estimated to affect more that 207 million people worldwide. Due to the intensive use of praziquantel, there is increasing concern about the development of drug-resistant strains. Therefore, it is necessary to search for and investigate new potential schistosomicidal compounds. This work reports the in vivo effect of the alkaloid epiisopiloturine (EPI against adults and juvenile worms of Schistosoma mansoni. EPI was first purified its thermal behavior and theoretical solubility parameters charaterised. In the experiment, mice were treated with EPI over the 21 days post-infection with the doses of 40 and 200 mg/kg, and 45 days post-infection with single doses of 40, 100 and 300 mg/kg. The treatment with EPI at 40 mg/kg was more effective in adult worms when compared with doses of 100 and 300 mg/kg. The treatment with 40 mg/kg in adult worms reduced parasite burden significantly, lead to reduction in hepatosplenomegaly, reduced the egg burden in faeces, and decreased granuloma diameter. Scanning electron microscopy revealed morphological changes to the parasite tegument after treatment, including the loss of important features. Additionally, the in vivo treatment against juvenile with 40 mg/kg showed a reduction of the total worm burden of 50.2%. Histopathological studies were performed on liver, spleen, lung, kidney and brain and EPI was shown to have a DL50 of 8000 mg/kg. Therefore EPI shows potential to be used in schistosomiasis treatment. This is the first time that schistosomicidal in vivo activity of EPI has been reported.

  19. Anthelmintic Activity In Vivo of Epiisopiloturine against Juvenile and Adult Worms of Schistosoma mansoni

    Science.gov (United States)

    Guimarães, Maria A.; de Oliveira, Rosimeire N.; Véras, Leiz M. C.; Lima, David F.; Campelo, Yuri D. M.; Campos, Stefano Augusto; Kuckelhaus, Selma A. S.; Pinto, Pedro L. S.; Eaton, Peter; Mafud, Ana C.; Mascarenhas, Yvonne P.; Allegretti, Silmara M.; de Moraes, Josué; Lolić, Aleksandar; Verbić, Tatjana; Leite, José Roberto S. A.

    2015-01-01

    Schistosomiasis is a serious disease currently estimated to affect more that 207 million people worldwide. Due to the intensive use of praziquantel, there is increasing concern about the development of drug-resistant strains. Therefore, it is necessary to search for and investigate new potential schistosomicidal compounds. This work reports the in vivo effect of the alkaloid epiisopiloturine (EPI) against adults and juvenile worms of Schistosoma mansoni. EPI was first purified its thermal behavior and theoretical solubility parameters charaterised. In the experiment, mice were treated with EPI over the 21 days post-infection with the doses of 40 and 200 mg/kg, and 45 days post-infection with single doses of 40, 100 and 300 mg/kg. The treatment with EPI at 40 mg/kg was more effective in adult worms when compared with doses of 100 and 300 mg/kg. The treatment with 40 mg/kg in adult worms reduced parasite burden significantly, lead to reduction in hepatosplenomegaly, reduced the egg burden in faeces, and decreased granuloma diameter. Scanning electron microscopy revealed morphological changes to the parasite tegument after treatment, including the loss of important features. Additionally, the in vivo treatment against juvenile with 40 mg/kg showed a reduction of the total worm burden of 50.2%. Histopathological studies were performed on liver, spleen, lung, kidney and brain and EPI was shown to have a DL50 of 8000 mg/kg. Therefore EPI shows potential to be used in schistosomiasis treatment. This is the first time that schistosomicidal in vivo activity of EPI has been reported. PMID:25816129

  20. Temporal variation and lack of host specificity among bacterial endosymbionts of Osedax bone worms (Polychaeta: Siboglinidae

    Directory of Open Access Journals (Sweden)

    Salathé Rahel M

    2012-09-01

    Full Text Available Abstract Background Osedax worms use a proliferative root system to extract nutrients from the bones of sunken vertebrate carcasses. The roots contain bacterial endosymbionts that contribute to the nutrition of these mouthless and gutless worms. The worms acquire these essential endosymbionts locally from the environment in which their larvae settle. Here we report on the temporal dynamics of endosymbiont diversity hosted by nine Osedax species sampled during a three-year investigation of an experimental whale fall at 1820-m depth in the Monterey Bay, California. The host species were identified by their unique mitochondrial COI haplotypes. The endosymbionts were identified by ribotyping with PCR primers specifically designed to target Oceanospirillales. Results Thirty-two endosymbiont ribotypes associated with these worms clustered into two distinct bacterial ribospecies that together comprise a monophyletic group, mostly restricted to deep waters (>1000 m. Statistical analyses confirmed significant changes in the relative abundances of host species and the two dominant endosymbiont ribospecies during the three-year sampling period. Bone type (whale vs. cow also had a significant effect on host species, but not on the two dominant symbiont ribospecies. No statistically significant association existed between the host species and endosymbiont ribospecies. Conclusions Standard PCR and direct sequencing proved to be an efficient method for ribotyping the numerically dominant endosymbiont strains infecting a large sample of host individuals; however, this method did not adequately represent the frequency of mixed infections, which appears to be the rule rather than an exception for Osedax individuals. Through cloning and the use of experimental dilution series, we determined that minority ribotypes constituting less than 30% of a mixture would not likely be detected, leading to underestimates of the frequency of multiple infections in host

  1. Worm-like thrombus in left main coronary artery after cytostatic treatment.

    Science.gov (United States)

    Karavelioglu, Yusuf; Ekicibasi, Erkan; Tanalp, Ali C; Karapinar, Hekim; Aung, Soe M

    2010-07-01

    This paper reports a 43-year-old patient who had a large, mobile, worm-like thrombus in the left main coronary artery after receiving a chemotherapy regimen containing cisplatin, bleomycin and etoposide for a nonseminomatous testes tumor. The patient was successfully treated with thrombolytic therapy. Physicians should be aware that thrombotic events may be observed after the administration of certain chemotherapeutic agents, particularly cisplatin.

  2. AFSC/RACE/FBEP/Laurel: Effects of natural and anthropogenic disturbance on polychaete worm tubes and age-0 flatfish distribution

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is from a field experiment that examined how juvenile flatfish distribution changed with worm tube heterogeneity, i.e. density and patchiness.

  3. The larval nervous system of the penis worm Priapulus caudatus (Ecdysozoa).

    Science.gov (United States)

    Martín-Durán, José M; Wolff, Gabriella H; Strausfeld, Nicholas J; Hejnol, Andreas

    2016-01-05

    The origin and extreme diversification of the animal nervous system is a central question in biology. While most of the attention has traditionally been paid to those lineages with highly elaborated nervous systems (e.g. arthropods, vertebrates, annelids), only the study of the vast animal diversity can deliver a comprehensive view of the evolutionary history of this organ system. In this regard, the phylogenetic position and apparently conservative molecular, morphological and embryological features of priapulid worms (Priapulida) place this animal lineage as a key to understanding the evolution of the Ecdysozoa (i.e. arthropods and nematodes). In this study, we characterize the nervous system of the hatching larva and first lorica larva of the priapulid worm Priapulus caudatus by immunolabelling against acetylated and tyrosinated tubulin, pCaMKII, serotonin and FMRFamide. Our results show that a circumoral brain and an unpaired ventral nerve with a caudal ganglion characterize the central nervous system of hatching embryos. After the first moult, the larva attains some adult features: a neck ganglion, an introvert plexus, and conspicuous secondary longitudinal neurites. Our study delivers a neuroanatomical framework for future embryological studies in priapulid worms, and helps illuminate the course of nervous system evolution in the Ecdysozoa.

  4. Self-avoiding worm-like chain model for dsDNA loop formation

    CERN Document Server

    Pollak, Yaroslav; Amit, Roee

    2014-01-01

    We compute for the first time the effects of excluded volume on the probability for double-stranded DNA to form a loop. We utilize a Monte-Carlo algorithm for generation of large ensembles of self- avoiding worm-like chains, which are used to compute the J-factor for varying lengthscales. In the entropic regime, we confirm the scaling-theory prediction of a power-law drop off of -1.92, which is significantly stronger than the -1.5 power-law predicted by the non-self-avoiding worm-like chain model. In the elastic regime, we find that the angle-independent end-to-end chain distribution is highly anisotropic. This anisotropy, combined with the excluded volume constraints, lead to an increase in the J-factor of the self-avoiding worm-like chain by about half an order of magnitude relative to its non-self-avoiding counterpart. This increase could partially explain the anomalous results of recent cyclization experiments, in which short dsDNA molecules were found to have an increased propensity to form a loop.

  5. Packet Payload Monitoring for Internet Worm Content Detection Using Deterministic Finite Automaton with Delayed Dictionary Compression

    Directory of Open Access Journals (Sweden)

    Divya Selvaraj

    2014-01-01

    Full Text Available Packet content scanning is one of the crucial threats to network security and network monitoring applications. In monitoring applications, payload of packets in a network is matched against the set of patterns in order to detect attacks like worms, viruses, and protocol definitions. During network transfer, incoming and outgoing packets are monitored in depth to inspect the packet payload. In this paper, the regular expressions that are basically string patterns are analyzed for packet payloads in detecting worms. Then the grouping scheme for regular expression matching is rewritten using Deterministic Finite Automaton (DFA. DFA achieves better processing speed during regular expression matching. DFA requires more memory space for each state. In order to reduce memory utilization, decompression technique is used. Delayed Dictionary Compression (DDC is applied for achieving better speeds in the communication links. DDC achieves decoding latency during compression of payload packets in the network. Experimental results show that the proposed approach provides better time consumption and memory utilization during detection of Internet worm attacks.

  6. Worm Monte Carlo study of the honeycomb-lattice loop model

    Energy Technology Data Exchange (ETDEWEB)

    Liu Qingquan, E-mail: liuqq@mail.ustc.edu.c [Hefei National Laboratory for Physical Sciences at Microscale, Department of Modern Physics, University of Science and Technology of China, Hefei, 230027 (China); Deng Youjin, E-mail: yjdeng@ustc.edu.c [Hefei National Laboratory for Physical Sciences at Microscale, Department of Modern Physics, University of Science and Technology of China, Hefei, 230027 (China); Garoni, Timothy M., E-mail: t.garoni@ms.unimelb.edu.a [ARC Centre of Excellence for Mathematics and Statistics of Complex Systems, Department of Mathematics and Statistics, University of Melbourne, Victoria 3010 (Australia)

    2011-05-11

    We present a Markov-chain Monte Carlo algorithm of worm type that correctly simulates the O(n) loop model on any (finite and connected) bipartite cubic graph, for any real n>0, and any edge weight, including the fully-packed limit of infinite edge weight. Furthermore, we prove rigorously that the algorithm is ergodic and has the correct stationary distribution. We emphasize that by using known exact mappings when n=2, this algorithm can be used to simulate a number of zero-temperature Potts antiferromagnets for which the Wang-Swendsen-Kotecky cluster algorithm is non-ergodic, including the 3-state model on the kagome lattice and the 4-state model on the triangular lattice. We then use this worm algorithm to perform a systematic study of the honeycomb-lattice loop model as a function of n{<=}2, on the critical line and in the densely-packed and fully-packed phases. By comparing our numerical results with Coulomb gas theory, we identify a set of exact expressions for scaling exponents governing some fundamental geometric and dynamic observables. In particular, we show that for all n{<=}2, the scaling of a certain return time in the worm dynamics is governed by the magnetic dimension of the loop model, thus providing a concrete dynamical interpretation of this exponent. The case n>2 is also considered, and we confirm the existence of a phase transition in the 3-state Potts universality class that was recently observed via numerical transfer matrix calculations.

  7. Effects of conspecifics and heterospecifics on individual worm mass in four helminth species parasitic in fish.

    Science.gov (United States)

    Poulin, R; Giari, L; Simoni, E; Dezfuli, B S

    2003-06-01

    Intraspecific and interspecific effects on the growth and body size of helminths are rarely studied in natural situations, yet knowing what determines helminth sizes and thus fecundity is crucial to our understanding of helminth ecology and epidemiology. The determinants of average individual worm mass were investigated in four common species of helminths parasitic in trout, Salmo trutta. In the acanthocephalan Echinorhynchus truttae, there was a negative relationship between the intensity of infection by conspecifics and average individual worm size. However, in the acanthocephalans Pomphorhynchus laevis and Acanthocephalus anguillae and in the cestode Cyathocephalus truncatus, the relationship was positive: individual worms were larger on average when co-occurring with many conspecifics than when co-occurring with very few. In addition, the average mass of individual C. truncatus in a host decreased as the total mass of other helminth species in the same host increased. This interspecific effect involves the whole helminth community, as the combined effect of all other helminth species is a better predictor of reduced mass in C. truncatus than the mass of any other species taken on its own. These results illustrate the importance of considering helminth interactions and helminth growth in a natural setting.

  8. Zinc and mechanical prowess in the jaws of Nereis, a marine worm.

    Science.gov (United States)

    Lichtenegger, Helga C; Schöberl, Thomas; Ruokolainen, Janne T; Cross, Julie O; Heald, Steve M; Birkedal, Henrik; Waite, J Herbert; Stucky, Galen D

    2003-08-05

    Higher animals typically rely on calcification to harden certain tissues such as bones and teeth. Some notable exceptions can be found in invertebrates: The fangs, teeth, and mandibles of diverse arthropod species have been reported to contain high levels of zinc. Considerable quantities of zinc also occur in the jaws of the marine polychaete worm Nereis sp. High copper levels in the polychaete worm Glycera dibranchiata recently were attributed to a copper-based biomineral reinforcing the jaws. In the present article, we attempt to unravel the role of zinc in Nereis limbata jaws, using a combination of position-resolved state-of-the-art techniques. It is shown that the local hardness and stiffness of the jaws correlate with the local zinc concentration, pointing toward a structural role for zinc. Zinc always is detected in tight correlation with chlorine, suggesting the presence of a zinc-chlorine compound. No crystalline inorganic phase was found, however, and results from x-ray absorption spectroscopy further exclude the presence of simple inorganic zinc-chlorine compounds in amorphous form. The correlation of local histidine levels in the protein matrix and zinc concentration leads us to hypothesize a direct coordination of zinc and chlorine to the protein. A comparison of the role of the transition metals zinc and copper in the jaws of two polychaete worm species Nereis and Glycera, respectively, is presented.

  9. Cell death and the immune responses of the sipunculan worm Themiste petricola

    Directory of Open Access Journals (Sweden)

    GA Blanco

    2010-10-01

    Full Text Available We have recently studied the role of cell death in the immune system of the sipunculan worm Themiste petricola. Typical biochemical and morphological changes of apoptosis were induced in celomocytes of these marine worms after in vitro exposure of cells to hydrogen peroxide. Apoptosis was time and dose dependent, and required several hours to become apparent. Surprisingly, in unexposed samples a subtype of granulocyte was observed to undergo homotypic aggregation, extensive cytoskeletal changes, and degranulation followed by cell death. This spontaneous response ending in cell death occurred in a divalent cation-dependent manner, served to entrap foreign particles, and was blocked by EDTA-containing saline solutions. Even though the mode of granulocyte cell death shares some features with apoptosis, it appears to be a different form of programmed cell death since it occurs within minutes and does not produce single cell-derived apoptotic bodies but transforms itself into one or several syncytial masses with haemostatic and immune purposes. Since numerous granulocyte types and multicellular masses involved in cellular immunity have been described in sipunculan worms, the review also discusses the potential influence of activation of granulocytes by sea water in expanding the variety of morphological types and multicellular structures identified through morphological studies among sipunculan species.

  10. Dual geometric worm algorithm for two-dimensional discrete classical lattice models

    Science.gov (United States)

    Hitchcock, Peter; Sørensen, Erik S.; Alet, Fabien

    2004-07-01

    We present a dual geometrical worm algorithm for two-dimensional Ising models. The existence of such dual algorithms was first pointed out by Prokof’ev and Svistunov [N. Prokof’ev and B. Svistunov, Phys. Rev. Lett. 87, 160601 (2001)]. The algorithm is defined on the dual lattice and is formulated in terms of bond variables and can therefore be generalized to other two-dimensional models that can be formulated in terms of bond variables. We also discuss two related algorithms formulated on the direct lattice, applicable in any dimension. These latter algorithms turn out to be less efficient but of considerable intrinsic interest. We show how such algorithms quite generally can be “directed” by minimizing the probability for the worms to erase themselves. Explicit proofs of detailed balance are given for all the algorithms. In terms of computational efficiency the dual geometrical worm algorithm is comparable to well known cluster algorithms such as the Swendsen-Wang and Wolff algorithms, however, it is quite different in structure and allows for a very simple and efficient implementation. The dual algorithm also allows for a very elegant way of calculating the domain wall free energy.

  11. Chemical Composition and Nutrient Digestibility of Super Worm Meal in Red Tilapia Juvenile

    Directory of Open Access Journals (Sweden)

    M. D. Abd Rahman Jabir*, S. A. Razak and S. Vikineswary

    2012-10-01

    Full Text Available The chemical composition and nutrient digestibility of super worm (Zophobas morio meal were determined for fish feed formulations. Experiments were conducted to compare super worm meal (SWM with fish meal (FM as main protein sources for fish diets. Super worm had lower protein content (42.83% compared to fish meal (52.64%. SWM contained high percentage (40.01% of lipids along with quality protein and this made it a suitable replacement for FM. SWM contained seventeen amino acids including the essential amino acids. All eight essential amino acids present were similar in values except for methionine which showed a large difference with 5.75 (mg/g crude protein and 21.17 (mg/g crude protein for SWM and FM respectively. SWM contained higher percentage of arginine and glutamic acid while the rest of the essential amino acids were lower than those present in FM. The fatty acid profile of SWM also showed a good polyunsaturated to saturated fatty acid ratio (0.87. Apparent digestibility coefficients (ADC of protein in SWM diet was lowest (50.53±6.08% and significantly different (P<0.05 from that of FM diet (77.48±0.53%. Lipid digestibility of SWM based diet was significantly lower (69.76±3.72% than that of FM value (91.51±0.21%. However, SWM-based diets fulfilled the requirements of fish recommended by FAO.

  12. Underwater microscopy for in situ studies of benthic ecosystems

    Science.gov (United States)

    Mullen, Andrew D.; Treibitz, Tali; Roberts, Paul L. D.; Kelly, Emily L. A.; Horwitz, Rael; Smith, Jennifer E.; Jaffe, Jules S.

    2016-07-01

    Microscopic-scale processes significantly influence benthic marine ecosystems such as coral reefs and kelp forests. Due to the ocean's complex and dynamic nature, it is most informative to study these processes in the natural environment yet it is inherently difficult. Here we present a system capable of non-invasively imaging seafloor environments and organisms in situ at nearly micrometre resolution. We overcome the challenges of underwater microscopy through the use of a long working distance microscopic objective, an electrically tunable lens and focused reflectance illumination. The diver-deployed instrument permits studies of both spatial and temporal processes such as the algal colonization and overgrowth of bleaching corals, as well as coral polyp behaviour and interspecific competition. By enabling in situ observations at previously unattainable scales, this instrument can provide important new insights into micro-scale processes in benthic ecosystems that shape observed patterns at much larger scales.

  13. Towards an integrated approach to marine benthic monitoring.

    Science.gov (United States)

    Barrio Froján, Christopher R S; Cooper, Keith M; Bolam, Stefan G

    2016-03-15

    In the UK, most marine benthic monitoring is carried out in a piecemeal fashion, funded by different sectors of industry that utilise the marine environment under licence. Monitoring requirements are imposed by licence conditions, which can vary considerably between licences. The UK Government also conducts marine environmental surveys in support of its legislative commitments. The present investigation reviews these different monitoring approaches to highlight whether synergies between them could be developed into an integrated approach to marine benthic monitoring. An integrated approach would have ecological benefits, as greater consistency in sampling and analytical protocols would reduce uncertainty in the predictions of impact, and facilitate the assessment of Good Environmental Status under the Marine Strategy Framework Directive. The same approach would also be of financial benefit, as spatio-temporal duplication in sampling would be reduced, and the value of acquired data would be maximised, resulting in a more efficient and cost-effective approach.

  14. Guinea worm (Dracunculus medinensis) eradication: a pilot study conducted at the Ohaukwu Local Government Areas, Ebonyi State, Nigeria, West Africa.

    Science.gov (United States)

    Ogamdi, S O; Onwe, F

    2001-01-01

    The incidence and the prevalence of Guinea worm disease, a major cause of disability and a frequent cause of serious permanent deformity, were both drastically reduced in Ohaukwu Local Government Communities, with the provision (through bore holes) of a safer form of drinking water. Since 1986, the Carter Center program has been working to eradicate Guinea worm. The bore holes were dug through the Wasatan Project, a Japanese-funded grant awarded to the Enugu State Ministry of Health to help provide safer drinking water in the local communities. Bore holes were dug in several communities in Ohaukwu Local Government Areas between January 1991 and June 1991. The number of Guinea worm cases in the selected communities was ascertained and recorded by health workers. There was more than a 90% reduction in the number of Guinea worm (Dracunculus medinensis) cases after one year. Data collection began in June 1991, shortly after the completion of bore holes in the selected communities. By December 1998, when one of the villages was spot checked for Guinea worm infection, no active case was found. There is a need for post evaluation of all the villages studied to determine the current prevalence of Guinea worm disease.

  15. ULTRASTRUCTURAL CHANGES IN Schistosoma mansoni MALE WORMS AFTER in vitro INCUBATION WITH THE ESSENTIAL OIL OF Mentha x villosa Huds

    Directory of Open Access Journals (Sweden)

    Thiago José MATOS-ROCHA

    2016-01-01

    Full Text Available Introduction: The essential oil Mentha x villosa (MVEO has a wide range of actions, including antibacterial, antifungal, antiprotozoal and schistosomicidal actions. The present study aimed to investigate the ultrastructural changes of MVEO on the tegument of adult Schistosoma mansoni. Materials and Methods: Different concentrations of MVEO were tested on S. mansoni adult worms in vitro. Ultrastructural changes on the tegument of these adult worms were evaluated using scanning electron microscopy (SEM and transmission electron microscopy (TEM. Results: The MVEO caused the death of all worms at 500 μg mL-1 after 24 h. After 24h of 500 μg mL-1 MVEO treatment, bubble lesions were observed over the entire body of worms and they presented loss of tubercles in some regions of the ventral portion. In the evaluation by TEM, S. mansoni adult worms treated with MVEO, 500 μg mL-1, presented changes in the tegument and vacuoles in the syncytial matrix region. Glycogen granules close to the muscle fibers were visible. Conclusion: The ability of MVEO to cause extensive ultrastructural damage to S. mansoni adult worms correlates with its schistosomicidal effects and confirms earlier findings with S. mansoni.

  16. Effects of doxycycline on heartworm embryogenesis, transmission, circulating microfilaria, and adult worms in microfilaremic dogs.

    Science.gov (United States)

    McCall, J W; Kramer, L; Genchi, C; Guerrero, J; Dzimianski, M T; Mansour, A; McCall, S D; Carson, B

    2014-11-15

    Tetracycline treatment of animals or humans infected with filariae that harbor Wolbachia endosymbionts blocks further embryogenesis, and existing microfilariae gradually die. This treatment also kills developing larvae and has a slow-kill effect on adult filariae, all presumably due to elimination of the Wolbachia. Also, Dirofilaria immitis microfilariae in blood collected from dogs up to 25 days after the last dose of doxycycline developed to infective L3 that were normal in appearance and motility in mosquitoes but did not continue to develop or migrate normally after subcutaneous (SC) injection into dogs. The present study was designed to determine whether heartworm microfilariae collected at later times after treatment would regain the ability to continue normal development in a dog. The study also was expected to yield valuable data on the effects of treatment on microfilariae and antigen levels and adult worms. The study was conducted in 16 dogs as two separate replicates at different times. A total of five dogs (two in Replicate A and three in Replicate B) infected either by SC injection of L3 or intravenous transplantation of adult heartworms were given doxycycline orally at 10mg/kg twice daily for 30 days, with three untreated controls. Microfilarial counts in the five treated dogs gradually declined during the 12-13 months after treatment initiation. Two dogs were amicrofilaremic before necropsy and three had 13 or fewer microfilariae/ml. Only one treated dog was negative for heartworm antigen before necropsy. Overall, treated dogs generally had fewer live adult heartworms than controls, and most of their live worms were moribund. All three control dogs remained positive for microfilariae and antigen and had many live worms. L3 from mosquitoes fed on blood collected 73-77 or 161-164 days after initiation of doxycycline treatments were injected SC into five dogs. None of the dogs injected with L3 from mosquitoes fed on blood from doxycycline-treated dogs

  17. Effects of Doxycycline on gene expression in Wolbachia and Brugia malayi adult female worms in vivo

    Directory of Open Access Journals (Sweden)

    Rao Ramakrishna U

    2012-02-01

    Full Text Available Abstract Background Most filarial nematodes contain Wolbachia symbionts. The purpose of this study was to examine the effects of doxycycline on gene expression in Wolbachia and adult female Brugia malayi. Methods Brugia malayi infected gerbils were treated with doxycycline for 6-weeks. This treatment largely cleared Wolbachia and arrested worm reproduction. RNA recovered from treated and control female worms was labeled by random priming and hybridized to the Version 2- filarial microarray to obtain expression profiles. Results and discussion Results showed significant changes in expression for 200 Wolbachia (29% of Wolbachia genes with expression signals in untreated worms and 546 B. malayi array elements after treatment. These elements correspond to known genes and also to novel genes with unknown biological functions. Most differentially expressed Wolbachia genes were down-regulated after treatment (98.5%. In contrast, doxycycline had a mixed effect on B. malayi gene expression with many more genes being significantly up-regulated after treatment (85% of differentially expressed genes. Genes and processes involved in reproduction (gender-regulated genes, collagen, amino acid metabolism, ribosomal processes, and cytoskeleton were down-regulated after doxycycline while up-regulated genes and pathways suggest adaptations for survival in response to stress (energy metabolism, electron transport, anti-oxidants, nutrient transport, bacterial signaling pathways, and immune evasion. Conclusions Doxycycline reduced Wolbachia and significantly decreased bacterial gene expression. Wolbachia ribosomes are believed to be the primary biological target for doxycycline in filarial worms. B. malayi genes essential for reproduction, growth and development were also down-regulated; these changes are consistent with doxycycline effects on embryo development and reproduction. On the other hand, many B. malayi genes involved in energy production, electron

  18. Proceedings of the Coastal Benthic Boundary Layer Key West Workshop

    Science.gov (United States)

    1997-06-24

    plates of aragonitic green algae (Halimeda, Penicillus, and Udeota), molluscan shells, benthic and planktonic foraminifera , echinoid spines, sponge...Florida Shelf ( Gulf of Mexico waters) to the north, and the Florida Straits to the south. Seismic data from the shelf surrounding the Dry Tortugas...the west Florida carbonate platform. It is bordered to the north by the Gulf of Mexico and to the south by the Straits of Florida. The site is well

  19. Interactive Effects of Metals and PAHs on Benthic Food Webs

    Science.gov (United States)

    2016-06-14

    In particular, we are interested in how contaminants influence foodweb interactions among these groups of organisms. OBJECTIVES Our research examines...merely by monitoring the abundance of various groups of organisms, but by determining their physiological responses and trophic interactions (i.e... Interactive Effects of Metals and PAHs on Benthic Food Webs Kevin R. Carman (PI) Dept. of Biological Sciences Louisiana State University Baton Rouge

  20. Benthic processes in fresh water fluffy sediments undergoing resuspension

    OpenAIRE

    Daniele Longhi; Marco Bartoli; Daniele Nizzoli; Pierluigi Viaroli

    2013-01-01

    In the Po river plain relict freshwater wetlands are characterised by a low free water to emergent macrophyte surface ratio, rapid infilling and fluffy sediments, undergoing frequent resuspension. Particle mixing should alter the steep gradients of dissolved gas, nutrient and organic matter quality that generally characterise sediments, with implications for benthic processes. Sediment features and solute fluxes were studied from December 2003 to February 2005 within the Busatello swamp compl...

  1. Abyssal hills: Influence of topography on benthic foraminiferal assemblages

    Science.gov (United States)

    Stefanoudis, Paris V.; Bett, Brian J.; Gooday, Andrew J.

    2016-11-01

    Abyssal plains, often thought of as vast flat areas, encompass a variety of terrains including abyssal hills, features that constitute the single largest landscape type on Earth. The potential influence on deep-sea benthic faunas of mesoscale habitat complexity arising from the presence of abyssal hills is still poorly understood. To address this issue we focus on benthic foraminifera (testate protists) in the >150-μm fraction of Megacorer samples (0-1 cm layer) collected at five different sites in the area of the Porcupine Abyssal Plain Sustained Observatory (NE Atlantic, 4850 m water depth). Three sites are located on the tops of small abyssal hills (200-500 m elevation) and two on the adjacent abyssal plain. We examined benthic foraminiferal assemblage characteristics (standing stock, diversity, composition) in relation to seafloor topography (hills vs. plain). Density and rarefied diversity were not significantly different between the hills and the plain. Nevertheless, hills do support a higher species density (i.e. species per unit area), a distinct fauna, and act to increase the regional species pool. Topographically enhanced bottom-water flows that influence food availability and sediment type are suggested as the most likely mechanisms responsible for these differences. Our findings highlight the potential importance of mesoscale heterogeneity introduced by relatively modest topography in regulating abyssal foraminiferal diversity. Given the predominance of abyssal hill terrain in the global ocean, we suggest the need to include faunal data from abyssal hills in assessments of abyssal ecology.

  2. Modern benthic foraminifer distribution in the Amerasian Basin, Arctic Ocean

    Science.gov (United States)

    Ishman, S.E.; Foley, K.M.

    1996-01-01

    A total of 38 box cores were collected from the Amerasian Basin, Arctic Ocean during the U.S. Geological Survey 1992 (PI92-AR) and 1993 (PI93-AR) Arctic Cruises aboard the U.S. Coast Guard Icebreaker Polar Star. In addition, the cruises collected geophysical data, piston cores and hydrographic data to address the geologic and oceanographic history of the western Arctic Ocean. This paper reports the results of the quantitative analyses of benthic foraminifer distribution data of the total (live + dead) assemblages derived from 22 box core-top samples. The results show that a distinct depth distribution of three dominant benthic foraminifer assemblages, the Textularia spp. - Spiroplectammina biformis, Cassidulina teretis and Oridorsalis tener - Eponides tumidulus Biofacies are strongly controlled by the dominant water masses within the Canada Basin: the Arctic Surface Water, Arctic Intermediate Water and Canada Basin Deep Water. The faunal distributions and their oceanographic associations in the Canada Basin are consistent with observations of benthic foraminifer distributions from other regions within the Arctic Ocean.

  3. Effects of an oil spill on benthic community production and respiration on subtropical intertidal sandflats.

    Science.gov (United States)

    Lee, Li-Hua; Lin, Hsing-Juh

    2013-08-15

    This study determined effects of an oil spill on subtropical benthic community production and respiration by monitoring CO2 fluxes in benthic chambers on intertidal sandflats during emersion before and after an accidental spill. The oil spill decreased sediment chlorophyll a concentrations, altered benthic macrofaunal community, and affected ecological functioning by suppressing or even stopping microalgal production, increasing bacterial respiration, and causing a shift from an autotrophic system to a heterotrophic system. Effects of the oil spill on the macrofauna were more severe than on benthic microalgae, and affected sedentary infauna more than motile epifauna. Despite the oil spill's impact on the benthic community and carbon metabolism, the affected area appeared to return to normal in about 23 days. Our results suggest that the prompt response of benthic metabolism to exposure to petroleum hydrocarbons can serve as a useful indicator of the impact of an oil spill.

  4. In vitro effects of amodiaquine on paired Schistosoma mansoni adult worms at concentrations of less than 5 µg/mL

    Directory of Open Access Journals (Sweden)

    Kentaro Kato

    2013-04-01

    Full Text Available In this study, the in vitro effects of amodiaquine (AQ monotherapy on the egg output of paired adult Schistosoma mansoni worms and their survival during in vitro culture were assessed. In addition, the gross morphological alterations of male and female worms caused by AQ were visually observed under a dissecting microscope. AQ significantly reduced the daily egg output of paired adult S. mansoni worms following incubation for 14 days at 1-5 µg/mL, but not at 0.5 µg/mL, compared with the control group. AQ also reduced the survival of male and female worms at concentrations of 2 and 5 µg/mL, respectively. Moreover, exposure to 5 µg/mL AQ caused severe swelling and/or localisation of black content in the body of all male and female worms within one or two days of incubation; subsequently, shrinkage in the male worms and elongation in the female worms were observed. The initial morphological alterations caused by AQ occurred along the intestinal tract of the male and female worms. To our knowledge, this is the first study to report not only the efficacy of AQ at concentrations lower than 5 µg/mL on paired adult S. mansoni worms, but also the effects of AQ on the intestinal tracts of worms in in vitro culture.

  5. Do benthic biofilters contribute to sustainability and restoration of the benthic environment impacted by offshore cage finfish aquaculture?

    Science.gov (United States)

    Aguado-Giménez, F; Piedecausa, M A; Carrasco, C; Gutiérrez, J M; Aliaga, V; García-García, B

    2011-08-01

    Benthic biofilters were deployed under a cage fish farm and in two reference locations to assess the influence of the farm on the biofilters and the surroundings, as well as to verify the usefulness of this technology as a mitigation tool. The biofilters underneath the farm recruited a fouling community practically identical to that of the control biofilters, which included a variety of trophic strategies. The former showed a higher 15N enrichment, indicating that fouling beneath the farm was benefiting from the farm waste. The waste retention efficiency was low (0.02 g N m(-2) month(-1)) beneath the farm. Benthic biofilters aggregated demersal wild fish around and within them. Pelagic wild fish also frequently used the biofilters beneath the farm, forming compact shoals around them. The increased complexity of the habitat below the fish farm enhanced biodiversity, but this improvement did not lead to the recovery of the sediments around the biofilters.

  6. Benthic Ecology from Space: Optics and Net Primary Production in Seagrass and Benthic Algae Across the Great Bahama Bank

    Science.gov (United States)

    2010-01-01

    representing the differ- ent habitats: turtle grass leaves of all ages present within a shoot were analyzed with epiphytes from Stns WS12, WS13, WS16, and WS20...the larger autotrophic community consisting of phyto- plankton, epiphytic algae, and benthic macro- and microalgae. In these clear waters, mean...Falkowski 1997), an insignificant contribution. Seagrass system- wide productivity may also be altered by epiphytic growth on the seagrass leaves

  7. USGS-NPS Servicewide Benthic Mapping Program (SBMP) workshop report

    Science.gov (United States)

    Moses, Christopher S.; Nayagandhi, Amar; Brock, John; Beavers, Rebecca

    2010-01-01

    The National Park Service (NPS) Inventory and Monitoring (I&M) Program recently allocated funds to initiate a benthic mapping program in ocean and Great Lakes parks in alignment with the NPS Ocean Park Stewardship 2007-2008 Action Plan. Seventy-four (ocean and Great Lakes) parks, spanning more than 5,000 miles of coastline, many affected by increasing coastal storms and other natural and anthropogenic processes, make the development of a Servicewide Benthic Mapping Program (SBMP) timely. The resulting maps and associated reports will be provided to NPS managers in a consistent servicewide format to help park managers protect and manage the 3 million acres of submerged National Park System natural and cultural resources. Of the 74 ocean and Great Lakes park units, the 40 parks with submerged acreage will be the focus in the early years of the SBMP. The NPS and U.S. Geological Survey (USGS) convened a workshop (June 3-5, 2008) in Lakewood, CO. The assembly of experts from the NPS and other Federal and non-Federal agencies clarified the needs and goals of the NPS SBMP and was one of the key first steps in designing the benthic mapping program. The central needs for individual parks, park networks, and regions identified by workshop participants were maps including bathymetry, bottom type, geology, and biology. This workshop, although not an exhaustive survey of data-acquisition technologies, highlighted the more promising technologies being used, existing sources of data, and the need for partnerships to leverage resources. Workshop products include recommended classification schemes and management approaches for consistent application and products similar to other long-term NPS benthic mapping efforts. As part of the SBMP, recommendations from this workshop, including application of an improved version of the Coastal and Marine Ecological Classification Standard (CMECS), will be tested in several pilot parks. In 2008, in conjunction with the findings of this workshop

  8. Parasiticidal and brine shrimp cytotoxicity potential of crude methanolic extract of rind of Punica granatum Linn against round worms and tape worms.

    Science.gov (United States)

    Ali, Niaz; Jamil, Ayesha; Shah, Syed Wadood Ali; Shah, Ismail; Ahmed, Ghayour; Junaid, Muhammad; Ahmed, Zahoor

    2015-05-01

    Rind of Punica granatum is traditionally used for anthelmintic purposes. The current work describes the possible anthelmintic activity of crude methanolic extract of Punica granatum (Pg. Cr) against round worms (Ascaridia galli) and the tape worms (Raillietina spiralis). Brine shrimp cytotoxicity is also performed. Brine shrimp cytotoxic activity was tested using different concentrations (1000 μg/mL, 100 μg/mL and 10 μg/mL) of Pg.Cr. In vitro anthelmintic activity of Pg. Cr was determined against the parasites using albendazole and piperazine citrate as standard anthelmintic drugs in concentration 10 mg/ml. LC50 value for Brine shrimp cytotoxicity was 189.44 ±28 μg/mL. In test concentration of 40mg/ml of the Pg. Cr, Raillietina spiralis was paralyzed in 23 minutes. However, for parasiticidal activity (death of the parasite), it took less time (40 minutes) as compared to standard Albendazole. Time taken for death of the parasite Raillietina spiralis, in concentration 40 mg /ml, is 40 min. While standard drugs took more time to kill the Raillietina spiralis. Pg. Cr took 19 minutes to paralyze the Ascaridia galli at concentration 40 mg/ml whereas; it took 48 minutes for to kill the parasite Ascaridia galli. The current work confirms the traditional use of rind of Punica granatum as anthelmintic against Raillietina spiralis and Ascaridia galli. Results of brine shrimp cytotoxicity assay warrant for the isolation of cytotoxic compounds. List of abbreviation- Pg. Cr = Crude methanolic extract of Punica granatum.

  9. Mapping of marine benthic invertebrates in the Oslofjord and the Skagerrak: sampling data of museum collections from 1950-1955 and from recent investigations

    Directory of Open Access Journals (Sweden)

    Eivind Oug

    2015-12-01

    Full Text Available Data from large sampling programmes for the mapping of marine invertebrates in the Oslofjord, Norway, and the Skagerrak, spanning more than six decades, are compiled and digitized to provide easy access in modern data repositories. Two sampling programmes undertaken in the period 1950–55 are still the most extensive mapping of marine benthic fauna in the area. Information from a total of more than 900 localities, or sampling events, covering all benthic habitats in the Oslofjord and coastal waters to Kvitsøy in Rogaland county, have been carefully digitized from field notes, original sea charts, and primary observations from sample handling in the field. Geographical coordinates referred to WGS84 chart datum have been fixed with a general accuracy of 20 m in the Oslofjord and 100–250 m in coastal areas, based on precise map sketches with cross-bearings to land objects and chart annotations. Most samples were collected using triangular, Agassiz and lightweight dredges. The collected material has been deposited in the collections of the Natural History Museum, University of Oslo. Two recent projects, ‘Polyskag’ and ‘Bioskag’ (2006–2014, are briefly described. The projects focused on the diversity of marine bristle worms (Polychaeta, inter alia providing material for molecular genetic analyses. Type localities for early described species and generally understudied biotopes were visited. The data from the 1950s, together with recent studies, constitute a considerable resource for studies of biodiversity, facilitated through the sharing of species records from the museum collections in modern data repositories. The accurate positioning of sampling localities in the 1950s is of particular value for documenting species distributions over long time spans, thus providing a reference base for studying present and future species changes and assessing the effects of human influence and environmental changes in the Oslofjord and the Skagerrak.

  10. More rapid shift to a benthic niche in larger Gadus morhua juveniles.

    Science.gov (United States)

    Ólafsdóttir, G Á; Gunnarsson, G S; Karlsson, H

    2015-08-01

    Trophic use by Atlantic cod Gadus morhua juveniles was examined early and late in the shift from pelagic to benthic habitats. Changes in the proportion of pelagic copepods, estimates of benthic prey indicated by isotope mixing models and stable-isotope values between sample periods suggested a gradual shift towards a benthic niche. Values of the trophic proxies, however, changed most markedly in the largest juvenile group, suggesting a more rapid trophic niche shift, and in turn competitive advantage, of larger juveniles.

  11. Benthic habitat characterisation of soft-bottom continental shelves: Integration of acoustic surveys, benthic samples and trawling disturbance intensity

    Science.gov (United States)

    de Juan, S.; Lo Iacono, C.; Demestre, M.

    2013-01-01

    Eleven sites were located on Mediterranean continental shelves to explore the link between the physical characteristics and epibenthic fauna from soft-sediment habitats. These sites, at 32-82 m in depth, were associated with fishing grounds and the trawling intensity was estimated at the site scale to assess the effects of trawling on benthic communities. Each site was surveyed with Multi-Beam (bathymetry and backscatter), side-scan sonar, benthic grabs and a surface dredge. The sites were clustered in three habitat types. Habitat 1, with moderate trawling disturbance, was characterised by homogeneous mud and associated epifauna that was also highly homogeneous across sites. Habitat 2, with sandy mud and scattered gravel and rocks, had a high abundance of sessile suspension feeders that probably attach to the coarser substratum and benefit from the low fishing disturbance in these sites. Habitat 3 included sites with heterogeneous sediments with maërl as the prevailing biocenosis and having the highest species richness, despite being subjected to variable trawling intensity. Statistical models were used to relate environmental parameters and the species abundance. More than 3 physical variables were necessary to explain the epifaunal patterns across sites, including the percentage of mud, sediment heterogeneity and fishing effort. These analyses are an essential step for extrapolating information from benthic samples to the larger scale of habitats, mapped through acoustic surveys. Despite this, a good integration is required between the mapping of physical habitat distribution and the ecological knowledge of communities.

  12. A Servicewide Benthic Mapping Program for National Parks

    Science.gov (United States)

    Moses, Christopher S.; Nayegandhi, Amar; Beavers, Rebecca; Brock, John

    2010-01-01

    In 2007, the National Park Service (NPS) Inventory and Monitoring Program directed the initiation of a benthic habitat mapping program in ocean and coastal parks in alignment with the NPS Ocean Park Stewardship 2007-2008 Action Plan. With 74 ocean and Great Lakes parks stretching over more than 5,000 miles of coastline across 26 States and territories, this Servicewide Benthic Mapping Program (SBMP) is essential. This program will deliver benthic habitat maps and their associated inventory reports to NPS managers in a consistent, servicewide format to support informed management and protection of 3 million acres of submerged National Park System natural and cultural resources. The NPS and the U.S. Geological Survey (USGS) convened a workshop June 3-5, 2008, in Lakewood, Colo., to discuss the goals and develop the design of the NPS SBMP with an assembly of experts (Moses and others, 2010) who identified park needs and suggested best practices for inventory and mapping of bathymetry, benthic cover, geology, geomorphology, and some water-column properties. The recommended SBMP protocols include servicewide standards (such as gap analysis, minimum accuracy, final products) as well as standards that can be adapted to fit network and park unit needs (for example, minimum mapping unit, mapping priorities). SBMP Mapping Process. The SBMP calls for a multi-step mapping process for each park, beginning with a gap assessment and data mining to determine data resources and needs. An interagency announcement of intent to acquire new data will provide opportunities to leverage partnerships. Prior to new data acquisition, all involved parties should be included in a scoping meeting held at network scale. Data collection will be followed by processing and interpretation, and finally expert review and publication. After publication, all digital materials will be archived in a common format. SBMP Classification Scheme. The SBMP will map using the Coastal and Marine Ecological

  13. Track-a-worm, an open-source system for quantitative assessment of C. elegans locomotory and bending behavior.

    Directory of Open Access Journals (Sweden)

    Sijie Jason Wang

    Full Text Available A major challenge of neuroscience is to understand the circuit and gene bases of behavior. C. elegans is commonly used as a model system to investigate how various gene products function at specific tissue, cellular, and synaptic foci to produce complicated locomotory and bending behavior. The investigation generally requires quantitative behavioral analyses using an automated single-worm tracker, which constantly records and analyzes the position and body shape of a freely moving worm at a high magnification. Many single-worm trackers have been developed to meet lab-specific needs, but none has been widely implemented for various reasons, such as hardware difficult to assemble, and software lacking sufficient functionality, having closed source code, or using a programming language that is not broadly accessible. The lack of a versatile system convenient for wide implementation makes data comparisons difficult and compels other labs to develop new worm trackers. Here we describe Track-A-Worm, a system rich in functionality, open in source code, and easy to use. The system includes plug-and-play hardware (a stereomicroscope, a digital camera and a motorized stage, custom software written to run with Matlab in Windows 7, and a detailed user manual. Grayscale images are automatically converted to binary images followed by head identification and placement of 13 markers along a deduced spline. The software can extract and quantify a variety of parameters, including distance traveled, average speed, distance/time/speed of forward and backward locomotion, frequency and amplitude of dominant bends, overall bending activities measured as root mean square, and sum of all bends. It also plots worm travel path, bend trace, and bend frequency spectrum. All functionality is performed through graphical user interfaces and data is exported to clearly-annotated and documented Excel files. These features make Track-A-Worm a good candidate for implementation in

  14. Track-a-worm, an open-source system for quantitative assessment of C. elegans locomotory and bending behavior.

    Science.gov (United States)

    Wang, Sijie Jason; Wang, Zhao-Wen

    2013-01-01

    A major challenge of neuroscience is to understand the circuit and gene bases of behavior. C. elegans is commonly used as a model system to investigate how various gene products function at specific tissue, cellular, and synaptic foci to produce complicated locomotory and bending behavior. The investigation generally requires quantitative behavioral analyses using an automated single-worm tracker, which constantly records and analyzes the position and body shape of a freely moving worm at a high magnification. Many single-worm trackers have been developed to meet lab-specific needs, but none has been widely implemented for various reasons, such as hardware difficult to assemble, and software lacking sufficient functionality, having closed source code, or using a programming language that is not broadly accessible. The lack of a versatile system convenient for wide implementation makes data comparisons difficult and compels other labs to develop new worm trackers. Here we describe Track-A-Worm, a system rich in functionality, open in source code, and easy to use. The system includes plug-and-play hardware (a stereomicroscope, a digital camera and a motorized stage), custom software written to run with Matlab in Windows 7, and a detailed user manual. Grayscale images are automatically converted to binary images followed by head identification and placement of 13 markers along a deduced spline. The software can extract and quantify a variety of parameters, including distance traveled, average speed, distance/time/speed of forward and backward locomotion, frequency and amplitude of dominant bends, overall bending activities measured as root mean square, and sum of all bends. It also plots worm travel path, bend trace, and bend frequency spectrum. All functionality is performed through graphical user interfaces and data is exported to clearly-annotated and documented Excel files. These features make Track-A-Worm a good candidate for implementation in other labs.

  15. Worm peptidomics

    Directory of Open Access Journals (Sweden)

    Steven J. Husson

    2014-06-01

    Full Text Available Bioactive peptides are present in all metazoan species where they orchestrate diverse functions. In the last decade, high-throughput approaches based on mass spectrometry helped the identification of endogenously occurring peptides in different species. We here review biochemical strategies to obtain sequence information of natural (non-tryptic peptides in Caenorhabditis elegans and in the related nematodes Caenorhabditis briggsae and Ascaris suum with particular attention for sample preparation and methodology. In addition, we describe seven new C. elegans neuropeptides that we recently discovered by sequencing additional peptides. Finally, we explain how differential peptidomics approaches were used to characterize key neuropeptide processing enzymes.

  16. Monitoring of the process of composting of kitchen waste in an institutional scale worm farm.

    Science.gov (United States)

    Kristiana, R; Nair, J; Anda, M; Mathew, K

    2005-01-01

    Vermicomposting provides an alternative method of managing waste that is ecofriendly and cost-effective. The Environmental Technology Centre (ETC) at Murdoch University and St. John of God Hospital (SJOG) signed a Memorandum of Understanding (MOU) to install a vermiculture system in SJOG to treat some of the organic waste generated by the on site kitchen facility. This is an effort made by SJOG to reduce the amount of organic waste sent to landfill each year and to treat the waste on site as part of a recycling/reuse program. The study is aimed at scientifically monitoring vermicomposting process and to understand the optimum management requirements to improve the operation of an institutional scale worm farm. In addition, an experiment was conducted to investigate the suitability of bedding materials: horse manure, cow manure, peat coir, and natural bedding (vermicast). The species of earthworms used in this experiment were Red (Lumbricus rubellus), Tiger (Eisenia fetida), and Blue (Lumbricus excavatus). The pH, temperature, worm population and quality of castings were tested in different beds. Results indicated that vermicast was the best bedding for vermicomposting, and there were no significant difference between the performances of the other three beds. However, it can be concluded that the bedding material of horse manure, cow manure, and peat coir were successfully established well within the experimental period of eight weeks, and cow manure with the lowest C:N ratio produced the best quality bedding. As using vermicast for the initial bedding creates a very high capital cost these organic substrates provide cost-effective alternative. Therefore they would be quite appropriate to initiate an institutional scale worm farm.

  17. Characterization of the N-glycans of female Angiostrongylus cantonensis worms.

    Science.gov (United States)

    Veríssimo, Carolina M; Morassutti, Alessandra L; von Itzstein, Mark; Sutov, Grigorij; Hartley-Tassell, Lauren; McAtamney, Sarah; Dell, Anne; Haslam, Stuart M; Graeff-Teixeira, Carlos

    2016-07-01

    Glycoconjugates play a crucial role in the host-parasite relationships of helminthic infections, including angiostrongyliasis. It has previously been shown that the antigenicity of proteins from female Angiostrongylus cantonensis worms may depend on their associated glycan moieties. Here, an N-glycan profile of A. cantonensis is reported. A total soluble extract (TE) was prepared from female A. cantonensis worms and was tested by western blot before and after glycan oxidation or N- and O-glycosidase treatment. The importance of N-glycans for the immunogenicity of A. cantonensis was demonstrated when deglycosylation of the TE with PNGase F completely abrogated IgG recognition. The TE was also fractionated using various lectin columns [Ulex europaeus (UEA), concanavalin A (Con A), Arachis hypogaea (PNA), Triticum vulgaris (WGA) and Lycopersicon esculentum (LEA)], and then each fraction was digested with PNGase F. Released N-glycans were analyzed with matrix-assisted laser desorption ionization (MALDI)-time-of-flight (TOF)-mass spectrometry (MS) and MALDI-TOF/TOF-MS/MS. Complex-type, high mannose, and truncated glycan structures were identified in all five fractions. Sequential MALDI-TOF-TOF analysis of the major MS peaks identified complex-type structures, with a α1-6 fucosylated core and truncated antennas. Glycoproteins in the TE were labeled with BodipyAF558-SE dye for a lectin microarray analysis. Fluorescent images were analyzed with ProScanArray imaging software followed by statistical analysis. A total of 29 lectins showed positive binding to the TE. Of these, Bandeiraea simplicifolia (BS-I), PNA, and Wisteria floribunda (WFA), which recognize galactose (Gal) and N-acetylgalactosamine (GalNAc), exhibited high affinity binding. Taken together, our findings demonstrate that female A. cantonensis worms have characteristic helminth N-glycans.

  18. Animal-sediment interactions: the effect of ingestion and excretion by worms on mineralogy

    Directory of Open Access Journals (Sweden)

    D. McIlroy

    2004-09-01

    Full Text Available By controlled experiments that simulate marine depositional environments, it is shown that accelerated weathering and clay mineral authigenesis occur during the combined process of ingestion, digestion and excretion of fine-grained sediment by two species of annelid worms. Previously characterized synthetic mud was created using finely ground, low-grade metamorphic slate (temperature approximately 300°C containing highly crystalline chlorite and muscovite. This was added to experiment and control tanks along with clean, wind-blown sand. Faecal casts were collected at regular intervals from the experimental tanks and, less frequently, from the control tanks. Over a period of many months the synthetic mud (slate proved to be unchanged in the control tanks, but was significantly different in faecal casts from the experimental tanks that contained the worms Arenicola marina and Lumbricus terrestris. Chlorite was preferentially destroyed during digestion in the gut of A. marina. Both chlorite and muscovite underwent XRD peak broadening with a skew developing towards higher lattice spacing, characteristic of smectite formation. A neoformed Fe-Mg-rich clay mineral (possibly berthierine and as-yet undefined clay minerals with very high d-spacing were detected in both A. marina and L. terrestris cast samples. We postulate that a combination of the low pH and bacteria-rich microenvironment in the guts of annelid worms may radically accelerate mineral dissolution and clay mineral precipitation processes during digestion. These results show that macrobiotic activity significantly accelerates weathering and mineral degradation as well as mineral authigenesis. The combined processes of sediment ingestion and digestion thus lead to early diagenetic growth of clay minerals in clastic sediments.

  19. Animal-sediment interactions: the effect of ingestion and excretion by worms on mineralogy

    Directory of Open Access Journals (Sweden)

    S. J. Needham

    2004-01-01

    Full Text Available By controlled experiments that simulate marine depositional environments, it is shown that accelerated weathering and clay mineral authigenesis occur during the combined process of ingestion, digestion and excretion of fine-grained sediment by two species of annelid worms. Previously characterized synthetic mud was created using finely ground, low-grade metamorphic slate (temperature approximately 300°C containing highly crystalline chlorite and muscovite. This was added to experiment and control tanks along with clean, wind-blown sand. Faecal casts were collected at regular intervals from the experimental tanks and, less frequently, from the control tanks. Over a period of many months the synthetic mud (slate proved to be unchanged in the control tanks, but was significantly different in faecal casts from the experimental tanks that contained the worms Arenicola marina and Lumbricus terrestris. Chlorite was preferentially destroyed during digestion in the gut of A. marina. Both chlorite and muscovite underwent XRD peak broadening with a skew developing towards higher lattice spacing, characteristic of smectite formation. A neoformed Fe-Mg-rich clay mineral (possibly berthierine and as-yet undefined clay minerals with very high d-spacing were detected in both A. marina and L. terrestris cast samples. We postulate that a combination of the low pH and bacteria-rich microenvironment in the guts of annelid worms may radically accelerate mineral dissolution and clay mineral precipitation processes during digestion. These results show that macrobiotic activity significantly accelerates weathering and mineral degradation as well as mineral authigenesis. The combined processes of sediment ingestion and digestion thus lead to early diagenetic growth of clay minerals in clastic sediments.

  20. WormScan: a technique for high-throughput phenotypic analysis of Caenorhabditis elegans.

    Directory of Open Access Journals (Sweden)

    Mark D Mathew

    Full Text Available BACKGROUND: There are four main phenotypes that are assessed in whole organism studies of Caenorhabditis elegans; mortality, movement, fecundity and size. Procedures have been developed that focus on the digital analysis of some, but not all of these phenotypes and may be limited by expense and limited throughput. We have developed WormScan, an automated image acquisition system that allows quantitative analysis of each of these four phenotypes on standard NGM plates seeded with E. coli. This system is very easy to implement and has the capacity to be used in high-throughput analysis. METHODOLOGY/PRINCIPAL FINDINGS: Our system employs a readily available consumer grade flatbed scanner. The method uses light stimulus from the scanner rather than physical stimulus to induce movement. With two sequential scans it is possible to quantify the induced phototactic response. To demonstrate the utility of the method, we measured the phenotypic response of C. elegans to phosphine gas exposure. We found that stimulation of movement by the light of the scanner was equivalent to physical stimulation for the determination of mortality. WormScan also provided a quantitative assessment of health for the survivors. Habituation from light stimulation of continuous scans was similar to habituation caused by physical stimulus. CONCLUSIONS/SIGNIFICANCE: There are existing systems for the automated phenotypic data collection of C. elegans. The specific advantages of our method over existing systems are high-throughput assessment of a greater range of phenotypic endpoints including determination of mortality and quantification of the mobility of survivors. Our system is also inexpensive and very easy to implement. Even though we have focused on demonstrating the usefulness of WormScan in toxicology, it can be used in a wide range of additional C. elegans studies including lifespan determination, development, pathology and behavior. Moreover, we have even adapted the

  1. A New Platy-armored Worm from the Early Cambrian Chengjiang Lagerstatte, South China

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    The Lower Cambrian Chengjiang Lagerstatte provides a good window to explore the origin and radiation of early bilaterians. Here we describe a netted sclerite-bearing worm Tabelliscolex hexagonus gen. et sp. nov., and tentatively assign it to palaeoscolecidans of priapulids. The cuticle of the animal is covered with two kinds of platy sclerites which are constructed by hexagonally arranged tubercles. Similar structures of the sclerites can be seen on some Cambrian palaeoscolecidans and lobopods, so, this new species is critical for understanding the relationships between lobopods and palaeoscolecidans.

  2. Expression of five acetylcholine receptor subunit genes in Brugia malayi adult worms.

    Science.gov (United States)

    Li, Ben-Wen; Rush, Amy C; Weil, Gary J

    2015-12-01

    Acetylcholine receptors (AChRs) are required for body movement in parasitic nematodes and are targets of "classical" anthelmintic drugs such as levamisole and pyrantel and of newer drugs such as tribendimidine and derquantel. While neurotransmission explains the effects of these drugs on nematode movement, their effects on parasite reproduction are unexplained. The levamisole AChR type (L-AChRs) in Caenorhabditis elegans is comprised of five subunits: Cel-UNC-29, Cel-UNC-38, Cel-UNC-63, Cel-LEV-1 and Cel-LEV-8. The genome of the filarial parasite Brugia malayi contains nine AChRs subunits including orthologues of Cel-unc-29, Cel-unc-38, and Cel-unc-63. We performed in situ hybridization with RNA probes to localize the expression of five AChR genes (Bm1_35890-Bma-unc-29, Bm1_20330-Bma-unc-38, Bm1_38195-Bma-unc-63, Bm1_48815-Bma-acr-26 and Bm1_40515-Bma-acr-12) in B. malayi adult worms. Four of these genes had similar expression patterns with signals in body muscle, developing embryos, spermatogonia, uterine wall adjacent to stretched microfilariae, wall of V as deferens, and lateral cord. Three L-AChR subunit genes (Bma-unc-29, Bma-unc-38 and Bma-unc-63) were expressed in body muscle, which is a known target of levamisole. Bma-acr-12 was co-expressed with these levamisole subunit genes in muscle, and this suggests that its protein product may form receptors with other alpha subunits. Bma-acr-26 was expressed in male muscle but not in female muscle. Strong expression signals of these genes in early embryos and gametes in uterus and testis suggest that AChRs may have a role in nervous system development of embryogenesis and spermatogenesis. This would be consistent with embryotoxic effects of drugs that target these receptors in filarial worms. Our data show that the expression of these receptor genes is tightly regulated with regard to localization in adult worms and developmental stage in embryos and gametes. These results may help to explain the broad effects of

  3. Ultrastructural investigation of spermatogenesis in the nemerine worm Procephalothrix sp. (Palaeonemertini, Anopla)

    Science.gov (United States)

    Reunov, A. A.; Klepal, W.

    1997-08-01

    Spermatogenesis and sperm structure of the nemertine worm Procephalothrix sp. were studied by transmission electron microscopy. It is shown that a flagellum and proacrosomal vesicles are common in spermatogonia and spermatocytes as in spermatogenesis of a number of marine invertebrates with external fertilization. Originally, the animals were collected as Procephalothrix spiralis but they were found to have a type of spermatozoon different from that of P. spiralis as described by Turbeville & Ruppert (1985). The re-identification of the material collected in the Japan Sea has shown that the features are characteristic, of P. spiralis (Coe, 1930). This finding suggests that P. spiralis shows variations in different parts of the world.

  4. First record of the sipunculan worm Phascolion (Phascolion caupo Hendrix, 1975 in the Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    L.M. FERRERO-VICENTE

    2012-12-01

    Full Text Available Specimens of the sipunculan worm Phascolion (Phascolion caupo Hendrix, 1975 have been collected for the first time in the Mediterranean Sea, thus increasing the number of known sipunculan species of up to 36 in this area. They were encountered on soft bottoms from the coast of San Pedro del Pinatar (Western Mediterranean. Thirty specimens were collected at a depth ranging from 32.6 to 37.2 m, mainly in sandy substrata with high load of silt and clays. 80% of the individuals were found inhabiting empty shells of gastropods or empty tubes of serpulid polychaetes.

  5. The versatile worm: genetic and genomic resources for Caenorhabditis elegans research.

    Science.gov (United States)

    Antoshechkin, Igor; Sternberg, Paul W

    2007-07-01

    Since its establishment as a model organism, Caenorhabditis elegans has been an invaluable tool for biological research. An immense spectrum of questions can be addressed using this small nematode, making it one of the most versatile and exciting model organisms. Although the many tools and resources developed by the C. elegans community greatly facilitate new discoveries, they can also overwhelm newcomers to the field. This Review aims to familiarize new worm researchers with the main resources, and help them to select the tools that are best suited for their needs. We also hope that it will be helpful in identifying new research opportunities and will promote the development of additional resources.

  6. A Decline in Benthic Foraminifera following the Deepwater Horizon Event in the Northeastern Gulf of Mexico

    Science.gov (United States)

    Schwing, Patrick T.; Romero, Isabel C.; Brooks, Gregg R.; Hastings, David W.; Larson, Rebekka A.; Hollander, David J.

    2015-01-01

    Sediment cores were collected from three sites (1000–1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (210Pb, 234Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80–93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) in the surface 10 mm relative to the down-core mean in all benthic foraminifera, including the dominant genera (Bulimina spp., Uvigerina spp., and Cibicidoides spp.). Cores collected in February 2011 documented a site-specific response. There was evidence of a recovery in the benthic foraminiferal density and BFAR at the site closest to the wellhead (45 NM, NE). However, the site farther afield (60 NM, NE) recorded a continued decline in benthic foraminiferal density and BFAR down to near-zero values. This decline in benthic foraminiferal density occurred simultaneously with abrupt increases in sedimentary accumulation rates, polycyclic aromatic hydrocarbon (PAH) concentrations, and changes in redox conditions. Persistent reducing conditions (as many as 10 months after the event) in the surface of these core records were a possible cause of the decline. Another possible cause was the increase (2–3 times background) in PAH’s, which are known to cause benthic foraminifera mortality and inhibit reproduction. Records of benthic foraminiferal density coupled with short-lived radionuclide geochronology and organic geochemistry were effective in quantifying the benthic response and will continue to be a valuable tool in determining the long

  7. A decline in benthic foraminifera following the deepwater horizon event in the northeastern Gulf of Mexico.

    Science.gov (United States)

    Schwing, Patrick T; Romero, Isabel C; Brooks, Gregg R; Hastings, David W; Larson, Rebekka A; Hollander, David J

    2015-01-01

    Sediment cores were collected from three sites (1000-1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (²¹⁰Pb, ²³⁴Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80-93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) in the surface 10 mm relative to the down-core mean in all benthic foraminifera, including the dominant genera (Bulimina spp., Uvigerina spp., and Cibicidoides spp.). Cores collected in February 2011 documented a site-specific response. There was evidence of a recovery in the benthic foraminiferal density and BFAR at the site closest to the wellhead (45 NM, NE). However, the site farther afield (60 NM, NE) recorded a continued decline in benthic foraminiferal density and BFAR down to near-zero values. This decline in benthic foraminiferal density occurred simultaneously with abrupt increases in sedimentary accumulation rates, polycyclic aromatic hydrocarbon (PAH) concentrations, and changes in redox conditions. Persistent reducing conditions (as many as 10 months after the event) in the surface of these core records were a possible cause of the decline. Another possible cause was the increase (2-3 times background) in PAH's, which are known to cause benthic foraminifera mortality and inhibit reproduction. Records of benthic foraminiferal density coupled with short-lived radionuclide geochronology and organic geochemistry were effective in quantifying the benthic response and will continue to be a valuable tool in determining the long

  8. A decline in benthic foraminifera following the deepwater horizon event in the northeastern Gulf of Mexico.

    Directory of Open Access Journals (Sweden)

    Patrick T Schwing

    Full Text Available Sediment cores were collected from three sites (1000-1200 m water depth in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH event (April-July 2010, 1500 m water depth. Short-lived radioisotope geochronologies (²¹⁰Pb, ²³⁴Th, organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80-93%. This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR in the surface 10 mm relative to the down-core mean in all benthic foraminifera, including the dominant genera (Bulimina spp., Uvigerina spp., and Cibicidoides spp.. Cores collected in February 2011 documented a site-specific response. There was evidence of a recovery in the benthic foraminiferal density and BFAR at the site closest to the wellhead (45 NM, NE. However, the site farther afield (60 NM, NE recorded a continued decline in benthic foraminiferal density and BFAR down to near-zero values. This decline in benthic foraminiferal density occurred simultaneously with abrupt increases in sedimentary accumulation rates, polycyclic aromatic hydrocarbon (PAH concentrations, and changes in redox conditions. Persistent reducing conditions (as many as 10 months after the event in the surface of these core records were a possible cause of the decline. Another possible cause was the increase (2-3 times background in PAH's, which are known to cause benthic foraminifera mortality and inhibit reproduction. Records of benthic foraminiferal density coupled with short-lived radionuclide geochronology and organic geochemistry were effective in quantifying the benthic response and will continue to be a valuable tool in determining

  9. WormClassroom.org: An Inquiry-rich Educational Web Portal for Research Resources of Caenorhabditis elegans

    Science.gov (United States)

    Lu, Fong-Mei; Stewart, James; White, John G.

    2007-01-01

    The utilization of biology research resources, coupled with a “learning by inquiry” approach, has great potential to aid students in gaining an understanding of fundamental biological principles. To help realize this potential, we have developed a Web portal for undergraduate biology education, WormClassroom.org, based on current research resources of a model research organism, Caenorhabditis elegans. This portal is intended to serve as a resource gateway for students to learn biological concepts using C. elegans research material. The driving forces behind the WormClassroom website were the strengths of C. elegans as a teaching organism, getting researchers and educators to work together to develop instructional materials, and the 3 P's (problem posing, problem solving, and peer persuasion) approach for inquiry learning. Iterative assessment is an important aspect of the WormClassroom site development because it not only ensures that content is up-to-date and accurate, but also verifies that it does, in fact, aid student learning. A primary assessment was performed to refine the WormClassroom website utilizing undergraduate biology students and nonstudent experts such as C. elegans researchers; results and comments were used for site improvement. We are actively encouraging continued resource contributions from the C. elegans research and education community for the further development of WormClassroom. PMID:17548872

  10. The effects of worms, clay and biochar on CO2 emissions during production and soil application of co-composts

    Science.gov (United States)

    Barthod, Justine; Rumpel, Cornélia; Paradelo, Remigio; Dignac, Marie-France

    2016-12-01

    In this study we evaluated CO2 emissions during composting of green wastes with clay and/or biochar in the presence and absence of worms (species of the genus Eisenia), as well as the effect of those amendments on carbon mineralization after application to soil. We added two different doses of clay, biochar or their mixture to pre-composted green wastes and monitored carbon mineralization over 21 days in the absence or presence of worms. The resulting co-composts and vermicomposts were then added to a loamy Cambisol and the CO2 emissions were monitored over 30 days in a laboratory incubation. Our results indicated that the addition of clay or clay/biochar mixture reduced carbon mineralization during co-composting without worms by up to 44 %. In the presence of worms, CO2 emissions during composting increased for all treatments except for the low clay dose. The effect of the amendments on carbon mineralization after addition to soil was small in the short term. Overall, composts increased OM mineralization, whereas vermicomposts had no effect. The presence of biochar reduced OM mineralization in soil with respect to compost and vermicompost without additives, whereas clay reduced mineralization only in the composts. Our study indicates a significant role of the conditions of composting on mineralization in soil. Therefore, the production of a low CO2 emission amendment requires optimization of feedstocks, co-composting agents and worm species.

  11. Hydrologic controls on basin-scale distribution of benthic macroinvertebrates

    Science.gov (United States)

    Bertuzzo, E.; Ceola, S.; Singer, G. A.; Battin, T. J.; Montanari, A.; Rinaldo, A.

    2013-12-01

    The presentation deals with the role of streamflow variability on basin-scale distributions of benthic macroinvertebrates. Specifically, we present a probabilistic analysis of the impacts of the variability along the river network of relevant hydraulic variables on the density of benthic macroinvertebrate species. The relevance of this work is based on the implications of the predictability of macroinvertebrate patterns within a catchment on fluvial ecosystem health, being macroinvertebrates commonly used as sensitive indicators, and on the effects of anthropogenic activity. The analytical tools presented here outline a novel procedure of general nature aiming at a spatially-explicit quantitative assessment of how near-bed flow variability affects benthic macroinvertebrate abundance. Moving from the analytical characterization of the at-a-site probability distribution functions (pdfs) of streamflow and bottom shear stress, a spatial extension to a whole river network is performed aiming at the definition of spatial maps of streamflow and bottom shear stress. Then, bottom shear stress pdf, coupled with habitat suitability curves (e.g., empirical relations between species density and bottom shear stress) derived from field studies are used to produce maps of macroinvertebrate suitability to shear stress conditions. Thus, moving from measured hydrologic conditions, possible effects of river streamflow alterations on macroinvertebrate densities may be fairly assessed. We apply this framework to an Austrian river network, used as benchmark for the analysis, for which rainfall and streamflow time-series and river network hydraulic properties and macroinvertebrate density data are available. A comparison between observed vs "modeled" species' density in three locations along the examined river network is also presented. Although the proposed approach focuses on a single controlling factor, it shows important implications with water resources management and fluvial

  12. Deep-sea benthic footprint of the deepwater horizon blowout.

    Directory of Open Access Journals (Sweden)

    Paul A Montagna

    Full Text Available The Deepwater Horizon (DWH accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km(2. Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km(2. Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer.

  13. Benthic phosphorus cycling in the Peruvian oxygen minimum zone

    Science.gov (United States)

    Lomnitz, Ulrike; Sommer, Stefan; Dale, Andrew W.; Löscher, Carolin R.; Noffke, Anna; Wallmann, Klaus; Hensen, Christian

    2016-03-01

    Oxygen minimum zones (OMZs) that impinge on continental margins favor the release of phosphorus (P) from the sediments to the water column, enhancing primary productivity and the maintenance or expansion of low-oxygen waters. A comprehensive field program in the Peruvian OMZ was undertaken to identify the sources of benthic P at six stations, including the analysis of particles from the water column, surface sediments, and pore fluids, as well as in situ benthic flux measurements. A major fraction of solid-phase P was bound as particulate inorganic P (PIP) both in the water column and in sediments. Sedimentary PIP increased with depth in the sediment at the expense of particulate organic P (POP). The ratio of particulate organic carbon (POC) to POP exceeded the Redfield ratio both in the water column (202 ± 29) and in surface sediments (303 ± 77). However, the POC to total particulate P (TPP = POP + PIP) ratio was close to Redfield in the water column (103 ± 9) and in sediment samples (102 ± 15). This suggests that the relative burial efficiencies of POC and TPP are similar under low-oxygen conditions and that the sediments underlying the anoxic waters on the Peru margin are not depleted in P compared to Redfield. Benthic fluxes of dissolved P were extremely high (up to 1.04 ± 0.31 mmol m-2 d-1), however, showing that a lack of oxygen promotes the intensified release of dissolved P from sediments, whilst preserving the POC / TPP burial ratio. Benthic dissolved P fluxes were always higher than the TPP rain rate to the seabed, which is proposed to be caused by transient P release by bacterial mats that had stored P during previous periods when bottom waters were less reducing. At one station located at the lower rim of the OMZ, dissolved P was taken up by the sediments, indicating ongoing phosphorite formation. This is further supported by decreasing porewater phosphate concentrations with sediment depth, whereas solid-phase P concentrations were comparatively

  14. Ecologic Atlas of Benthic Foraminifera of the Gulf of Mexico

    Science.gov (United States)

    Tietjen, John H.

    Because of their importance as indicators of petroleum deposits, the benthic foraminifera of the Gulf of Mexico are one of the most intensely studied groups of animals in the world. This is especially true of the foraminifera inhabiting the shallow shelf region of the northern and eastern Gulf; much less is known about the animals of the southern shelf, continental slope, and abyssal plains. The author spent 10 years examining collections from various not well-known areas of the Gulf; this atlas is a synthesis of distributional data from approximately 4500 previously known stations, plus new information from 400 additional stations.

  15. ECOLOGICAL ASPECTS OF BENTHIC COMMUNITIES FROM SOMESUL CALD CATCHMENT AREA

    Directory of Open Access Journals (Sweden)

    Karina Battes

    2001-01-01

    Full Text Available The present paper represents a preliminary study of periphyton and zoobenthos community from the Someşul Cald catchment area. Zoobenthos was sampled seasonally during 2000. Benthic community structure was similar at the five sampling sites. Thus, mayflies and chironomids recorded high numerical percentage abundances and densities. Oligochaetes, water mites and caddisflies were identified to species level. 38 Oligochaeta, 28 water mite and 12 caddis fly species were found in the sampling period. The samplings collected in the year 2001 included 80 algal species belonging to 5 phyla. Diatoms (Bacillariophyta dominated both qualitatively and quantitatively at all sampling sites.

  16. Complexity and simplification in understanding recruitment in benthic populations

    KAUST Repository

    Pineda, Jesús

    2008-11-13

    Research of complex systems and problems, entities with many dependencies, is often reductionist. The reductionist approach splits systems or problems into different components, and then addresses these components one by one. This approach has been used in the study of recruitment and population dynamics of marine benthic (bottom-dwelling) species. Another approach examines benthic population dynamics by looking at a small set of processes. This approach is statistical or model-oriented. Simplified approaches identify "macroecological" patterns or attempt to identify and model the essential, "first-order" elements of the system. The complexity of the recruitment and population dynamics problems stems from the number of processes that can potentially influence benthic populations, including (1) larval pool dynamics, (2) larval transport, (3) settlement, and (4) post-settlement biotic and abiotic processes, and larval production. Moreover, these processes are non-linear, some interact, and they may operate on disparate scales. This contribution discusses reductionist and simplified approaches to study benthic recruitment and population dynamics of bottom-dwelling marine invertebrates. We first address complexity in two processes known to influence recruitment, larval transport, and post-settlement survival to reproduction, and discuss the difficulty in understanding recruitment by looking at relevant processes individually and in isolation. We then address the simplified approach, which reduces the number of processes and makes the problem manageable. We discuss how simplifications and "broad-brush first-order approaches" may muddle our understanding of recruitment. Lack of empirical determination of the fundamental processes often results in mistaken inferences, and processes and parameters used in some models can bias our view of processes influencing recruitment. We conclude with a discussion on how to reconcile complex and simplified approaches. Although it

  17. Bacterial standing stock, meiofauna and sediment-nutrient characteristics: Indicators of benthic disturbance in the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; LokaBharathi, P.A.; Ansari, Z.A.; Nair, S.; Ingole, B.S.; Sheelu, G.; Mohandass, C.; Nath, B.N.; Rodrigues, N.

    As a part of the environmental impact assessment studies for polymetallic nodule mining, the effect of simulated "benthic disturbance" caused by a benthic hydraulic disturber was studied in the Central Indian Basin (CIB). The abundance...

  18. Difference in optimum temperature for growth and reproduction in benthic foraminifer Rosalina globularis: Implications for paleoclimatic studies

    Digital Repository Service at National Institute of Oceanography (India)

    Saraswat, R.; Nigam, R.; Pachkhande, S.

    and reproduction are different. The study shows that the ambient seawater temperature affects the growth, survival and reproduction in benthic foraminifera. The study further indicates that variation in morphology and abundance of benthic foraminifera, might...

  19. KAHO_BenthicHabitats - Benthic habitat of the coral reef ecosystem within and adjacent to Kaloko-Honokohau National Historical Park (KAHO) on the Kona Coast of Hawaii.

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A benthic habitat polygon coverage has been created of the coral reef ecosystem within and adjacent to Kaloko-Honokohau National Historical Park (KAHO) on the Kona...

  20. PUHE_BenthicHabitats - Benthic habitat of the coral reef ecosystem off the coast of Puukohola Heiau (PUHE) National Historic Site on the Kona Coast of Hawaii.

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A benthic habitat polygon coverage has been created of the coral reef ecosystem off the coast of Pu'ukohola Heiau (PUHE) National Historic Site on the Kona Coast of...

  1. PUHO_BenthicHabitats - Benthic habitat of the coral reef ecosystem off the coast of Puuhonua O Honaunau (PUHO) National Historical Park on the Kona Coast of Hawaii.

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A benthic habitat polygon coverage has been created of the coral reef ecosystem off the coast of Pu'uhonua O Honaunau (PUHO) National Historical Park on the Kona...

  2. Benthic Percent Cover Derived from Analysis of Benthic Images Collected during Towed-diver Surveys of the U.S. Pacific Reefs Since 2003

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data products described herein are part of the NOAA Coral Reef Conservation Program (CRCP) funded projects aimed at documenting the status and trends for benthic...

  3. Distribution of benthic foraminifera within oxygen minima zone, off central west coast, India

    Digital Repository Service at National Institute of Oceanography (India)

    Mazumder, A.; Henriques, P.J.; Nigam, R.

    and analyzed to study the effect of oxygen minima zone on benthic foraminiferal habitat. Benthic foraminifera were studied upto specific level of identification. However, to get a better picture, and keeping in mind that oxygen minima zone in the Arabian Sea...

  4. Towards a framework for the quantitative assessment of trawling impact on the seabed and benthic ecosystem

    DEFF Research Database (Denmark)

    Rijnsdorp, A. D.; Bastardie, Francois; Bolam, S.G.

    2016-01-01

    scraping of the seabed, sediment mobilization, and penetration, is a function of the mass, size, and speed of the individual component. The impact of the elements on the benthic community is quantified using a biological-trait approach that considers the vulnerability of the benthic community to trawl...

  5. Modeling food web interactions in benthic deep-sea ecosystems. A practical guide

    NARCIS (Netherlands)

    Soetaert, K.E.R.; Van Oevelen, D.J.

    2009-01-01

    Deep-sea benthic systems are notoriously difficult to sample. Even more than for other benthic systems, many flows among biological groups cannot be directly measured, and data sets remain incomplete and uncertain. In such cases, mathematical models are often used to quantify unmeasured biological i

  6. Carbon flows in the benthic food web at the deep-sea observatory HAUSGARTEN (Fram Strait)

    NARCIS (Netherlands)

    Van Oevelen, D.; Bergmann, M.; Soetaert, K.E.R.; Bauerfeind, E.; Hasemann, C.; Klages, M.; Schewe, I.; Soltwedel, T.; Budaeva, N.E.

    2011-01-01

    The HAUSGARTEN observatory is located in the eastern Fram Strait (Arctic Ocean) and used as long-term monitoring site to follow changes in the Arctic benthic ecosystem. Linear inverse modelling was applied to decipher carbon flows among the compartments of the benthic food web at the central HAUSGAR

  7. Modeling Benthic Sediment Processes to Predict Water Quality and Ecology in Narragansett Bay

    Science.gov (United States)

    The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal ...

  8. Food web flows through a sub-arctic deep-sea benthic community

    NARCIS (Netherlands)

    Gontikaki, E.; Van Oevelen, D.; Soetaert, K.E.R.; Prof. Witte, U.

    2011-01-01

    The benthic food web of the deep Faroe–Shetland Channel (FSC) was modelled by using the linear inverse modelling methodology. The reconstruction of carbon pathways by inverse analysis was based on benthic oxygen uptake rates, biomass data and transfer of labile carbon through the food web as reveale

  9. Thermal limit for metazoan life in question: in vivo heat tolerance of the Pompeii worm.

    Science.gov (United States)

    Ravaux, Juliette; Hamel, Gérard; Zbinden, Magali; Tasiemski, Aurélie A; Boutet, Isabelle; Léger, Nelly; Tanguy, Arnaud; Jollivet, Didier; Shillito, Bruce

    2013-01-01

    The thermal limit for metazoan life, expected to be around 50°C, has been debated since the discovery of the Pompeii worm Alvinella pompejana, which colonizes black smoker chimney walls at deep-sea vents. While indirect evidence predicts body temperatures lower than 50°C, repeated in situ temperature measurements depict an animal thriving at temperatures of 60°C and more. This controversy was to remain as long as this species escaped in vivo investigations, due to irremediable mortalities upon non-isobaric sampling. Here we report from the first heat-exposure experiments with live A. pompejana, following isobaric sampling and subsequent transfer in a laboratory pressurized aquarium. A prolonged (2 hours) exposure in the 50-55°C range was lethal, inducing severe tissue damages, cell mortalities and triggering a heat stress response, therefore showing that Alvinella's upper thermal limit clearly is below 55°C. A comparison with hsp70 stress gene expressions of individuals analysed directly after sampling in situ confirms that Alvinella pompejana does not experience long-term exposures to temperature above 50°C in its natural environment. The thermal optimum is nevertheless beyond 42°C, which confirms that the Pompeii worm ranks among the most thermotolerant metazoans.

  10. Thermal limit for metazoan life in question: in vivo heat tolerance of the Pompeii worm.

    Directory of Open Access Journals (Sweden)

    Juliette Ravaux

    Full Text Available The thermal limit for metazoan life, expected to be around 50°C, has been debated since the discovery of the Pompeii worm Alvinella pompejana, which colonizes black smoker chimney walls at deep-sea vents. While indirect evidence predicts body temperatures lower than 50°C, repeated in situ temperature measurements depict an animal thriving at temperatures of 60°C and more. This controversy was to remain as long as this species escaped in vivo investigations, due to irremediable mortalities upon non-isobaric sampling. Here we report from the first heat-exposure experiments with live A. pompejana, following isobaric sampling and subsequent transfer in a laboratory pressurized aquarium. A prolonged (2 hours exposure in the 50-55°C range was lethal, inducing severe tissue damages, cell mortalities and triggering a heat stress response, therefore showing that Alvinella's upper thermal limit clearly is below 55°C. A comparison with hsp70 stress gene expressions of individuals analysed directly after sampling in situ confirms that Alvinella pompejana does not experience long-term exposures to temperature above 50°C in its natural environment. The thermal optimum is nevertheless beyond 42°C, which confirms that the Pompeii worm ranks among the most thermotolerant metazoans.

  11. Microplastic moves pollutants and additives to worms, reducing functions linked to health and biodiversity.

    Science.gov (United States)

    Browne, Mark Anthony; Niven, Stewart J; Galloway, Tamara S; Rowland, Steve J; Thompson, Richard C

    2013-12-02

    Inadequate products, waste management, and policy are struggling to prevent plastic waste from infiltrating ecosystems [1, 2]. Disintegration into smaller pieces means that the abundance of micrometer-sized plastic (microplastic) in habitats has increased [3] and outnumbers larger debris [2, 4]. When ingested by animals, plastic provides a feasible pathway to transfer attached pollutants and additive chemicals into their tissues [5-15]. Despite positive correlations between concentrations of ingested plastic and pollutants in tissues of animals, few, if any, controlled experiments have examined whether ingested plastic transfers pollutants and additives to animals. We exposed lugworms (Arenicola marina) to sand with 5% microplastic that was presorbed with pollutants (nonylphenol and phenanthrene) and additive chemicals (Triclosan and PBDE-47). Microplastic transferred pollutants and additive chemicals into gut tissues of lugworms, causing some biological effects, although clean sand transferred larger concentrations of pollutants into their tissues. Uptake of nonylphenol from PVC or sand reduced the ability of coelomocytes to remove pathogenic bacteria by >60%. Uptake of Triclosan from PVC diminished the ability of worms to engineer sediments and caused mortality, each by >55%, while PVC alone made worms >30% more susceptible to oxidative stress. As global microplastic contamination accelerates, our findings indicate that large concentrations of microplastic and additives can harm ecophysiological functions performed by organisms.

  12. Antischistosomal activity of a calcium channel antagonist on schistosomula and adult Schistosoma mansoni worms

    Directory of Open Access Journals (Sweden)

    Vanessa Silva-Moraes

    2013-08-01

    Full Text Available Current schistosomiasis control strategies are largely based on chemotherapeutic agents and a limited number of drugs are available today. Praziquantel (PZQ is the only drug currently used in schistosomiasis control programs. Unfortunately, this drug shows poor efficacy in patients during the earliest infection phases. The effects of PZQ appear to operate on the voltage-operated Ca2+channels, which are located on the external Schistosoma mansoni membrane. Because some Ca2+channels have dihydropyridine drug class (a class that includes nifedipine sensitivity, an in vitro analysis using a calcium channel antagonist (clinically used for cardiovascular hypertension was performed to determine the antischistosomal effects of nifedipine on schistosomula and adult worm cultures. Nifedipine demonstrated antischistosomal activity against schistosomula and significantly reduced viability at all of the concentrations used alone or in combination with PZQ. In contrast, PZQ did not show significant efficacy when used alone. Adult worms were also affected by nifedipine after a 24 h incubation and exhibited impaired motility, several lesions on the tegument and intense contractility. These data support the idea of Ca2+channels subunits as drug targets and favour alternative therapeutic schemes when drug resistance has been reported. In this paper, strong arguments encouraging drug research are presented, with a focus on exploring schistosomal Ca2+channels.

  13. Self-Assembly of Amphiphilic Block Copolypeptoids – Micelles, Worms and Polymersomes

    Science.gov (United States)

    Fetsch, Corinna; Gaitzsch, Jens; Messager, Lea; Battaglia, Giuseppe; Luxenhofer, Robert

    2016-01-01

    Polypeptoids are an old but recently rediscovered polymer class with interesting synthetic, physico-chemical and biological characteristics. Here, we introduce new aromatic monomers, N-benzyl glycine N-carboxyanhydride and N-phenethyl glycine N-carboxyanhydride and their block copolymers with the hydrophilic polysarcosine. We compare their self-assembly in water and aqueous buffer with the self-assembly of amphiphilic block copolypeptoids with aliphatic side chains. The aggregates in water were investigated by dynamic light scattering and electron microscopy. We found a variety of morphologies, which were influenced by the polymer structure as well as by the preparation method. Overall, we found polymersomes, worm-like micelles and oligo-lamellar morphologies as well as some less defined aggregates of interconnected worms and vesicles. Such, this contribution may serve as a starting point for a more detailed investigation of the self-assembly behavior of the rich class of polypeptoids and for a better understanding between the differences in the aggregation behavior of non-uniform polypeptoids and uniform peptoids. PMID:27666081

  14. CpG oligodeoxynucleotides with crude parasite antigens reduce worm recovery in Opisthorchis viverrini infected hamsters.

    Science.gov (United States)

    Kaewraemruaen, Chamraj; Sermswan, Rasana W; Wongratanacheewin, Surasakdi

    2016-12-01

    Opisthorchis viverrini, a human liver fluke, is still an endemic parasitic infection in Thailand and nearly all countries in Southeast Asia. O. viverrini induces a chronic stage of infection in hamsters. During the first 2 weeks of infection, Th1 inducing cytokine, IL-12, increased but was down regulated in chronic infection. In this study it was found that unmethylated-CpG ODN (oligodeoxynucleotides) 1826 increased hamster mononuclear cell proliferation and stimulated IFN-γ production in vitro. The IFN-γ levels in hamster sera were significantly increased in hamsters injected with CpG ODN 1826 alone or plus crude somatic antigens (CSAg). Further investigation using the flow cytometer found that CD4(+)T cells and IFN-γ(+) CD4(+)T cells (Th1-like cells) in the hamster blood were significantly increased. The role of these cells in the protective responses in hamsters was evaluated by challenging with 25 metacercaria and observation for 3 months. The number of worms recovered was significantly reduced in the hamsters injected with CpG ODN 1826 with CSAg, but not in CpG ODN 1826 alone groups when compared to PBS control. The percent of reduction in hamsters against this parasite were 32.95% and 21.49% in the CpG ODN 1826 with CSAg and CpG ODN 1826 alone. This study indicates that CpG ODN 1826 plus parasite antigens elicit a Th1-like response that leads to the enhancement of worm reduction.

  15. Localization of the bioadhesive precursors of the sandcastle worm, Phragmatopoma californica (Fewkes).

    Science.gov (United States)

    Wang, Ching Shuen; Stewart, Russell J

    2012-01-15

    The marine sandcastle worm bonds mineral particles together into underwater composite dwellings with a proteinaceous glue. The products of at least four distinct secretory cell types are co-secreted from the building organ to form the glue. Prominent hetereogeneous granules contain dense sub-granules of Mg and the (polyphospho)proteins Pc3A and B, as well as at least two polybasic proteins, Pc1 and Pc4, as revealed by immunolabeling with specific antibodies against synthetic peptides. Equally prominent homogeneous granules comprise at least two polybasic proteins, Pc2 and Pc5, localized by immunolabeling with anti-synthetic peptide antibodies. The components of the sub-micrometer granule types are unknown, though positive staining with a redox-sensitive dye suggests the contents include o-dihydroxy-phenylalanine (dopa). Quantitative PCR and in situ hybridization demonstrated that a tyrosinase-like enzyme with a signal peptide was highly expressed in both the heterogeneous and homogeneous granules. The contents of the granules are poorly mixed in the secreted mixture that forms the glue. Subsequent covalent cross-linking of the glue may be catalyzed by the co-secreted tyrosinase. The first three parapodia of the sandcastle worm also contain at least two distinct secretory tissues. The Pc4 protein was immunolocalized to the anterior secretory cells and the tryosinase-like gene was expressed in the posterior secretory cells, which suggests these proteins may have multiple roles.

  16. Morphological Study of Adult Male Worms of Schistosoma mansoni Sambon, 1907 by Scanning Electron Microscopy

    Directory of Open Access Journals (Sweden)

    José Roberto Machado-Silva

    1997-09-01

    Full Text Available Tubercles, spines and sensory receptors are the most studied structures of adult male worms of Schistosoma mansoni isolated in other countries. The purpose of this investigation was to properly define these structures in Brazilian worms. Specimens 7-8 weeks after infection were recovered from albino SW mice and from a wild rodent (Nectomys squamipes and processed for scanning electron microscopy studies. Photomicrographs of the anterior region with the aspects related to the outer and inner regions of both suckers were considered. The ventral portion of the middle region was represented by the anterior of gynaecophoric canal while the dorsal surface was studied in its ventral and dorsal regions mainly focusing the aspect of the tubercles, spines and sensorial papillae. The outer surface of the oral sucker is spiny and spines are bigger, sharp with sensory receptors in their posterior edge. Tubercles with spines or receptors are more concentrated in the middle region and in one of the margins of the gynaecophoric canal. An excretory pore-like structure in the posterior portion was observed. The gynaecophoric canal has few sensory structures, spines broadned in their mid-region and are sharp pointed at the distal end. It was concluded that the presently studied characters are similar to those previously reported

  17. Schistosoma mansoni Sambon, 1907: morphometric differences between adult worms from sympatric rodent and human isolates

    Directory of Open Access Journals (Sweden)

    Neves Renata Heisler

    1998-01-01

    Full Text Available A computer software for image analysis (IMAGE PRO PLUS, MEDIA CYBERNETICS was utilized in male and females adult worms, aiming the morphological characterization of Schistosoma mansoni samples isolated from a slyvatic rodent, Nectomys squamipes, and humans in Sumidouro, Rio de Janeiro, Brazil and recovered from Mus musculus C3H/He. The following characters for males's testicular lobes were analyzed: number, area, density, larger and smaller diameter, longer and shorter axis and perimeter and extension; for females: area, longer and shorter axis, larger and smaller diameter and perimeter of the eggs and spine; oral and ventral suckers area and distance between them in both sex were determined. By the analysis of variance (one way ANOVA significant differences (p<0.05 were observed in all studied characters, except for the density of testicular lobes. Significant differences (p<0.05 were detected for all characters in the female worms. Data ratify that sympatric isolates present phenotypic differences and the adult female characters are useful for the proper identification of S. mansoni isolates.

  18. Active-site properties of Phrixotrix railroad worm green and red bioluminescence-eliciting luciferases.

    Science.gov (United States)

    Viviani, V R; Arnoldi, F G C; Venkatesh, B; Neto, A J S; Ogawa, F G T; Oehlmeyer, A T L; Ohmiya, Y

    2006-10-01

    The luciferases of the railroad worm Phrixotrix (Coleoptera: Phengodidae) are the only beetle luciferases that naturally produce true red bioluminescence. Previously, we cloned the green- (PxGR) and red-emitting (PxRE) luciferases of railroad worms Phrixotrix viviani and P. hirtus[OLE1]. These luciferases were expressed and purified, and their active-site properties were determined. The red-emitting PxRE luciferase displays flash-like kinetics, whereas PxGR luciferase displays slow-type kinetics. The substrate affinities and catalytic efficiency of PxRE luciferase are also higher than those of PxGR luciferase. Fluorescence studies with 8-anilino-1-naphthalene sulfonic acid and 6-p-toluidino-2-naphthalene sulfonic acid showed that the PxRE luciferase luciferin-binding site is more polar than that of PxGR luciferase, and it is sensitive to guanidine. Mutagenesis and modelling studies suggest that several invariant residues in the putative luciferin-binding site of PxRE luciferase cannot interact with excited oxyluciferin. These results suggest that one portion of the luciferin-binding site of the red-emitting luciferase is tighter than that of PxGR luciferase, whereas the other portion could be more open and polar.

  19. Molecular basis for the blue bioluminescence of the Australian glow-worm Arachnocampa richardsae (Diptera: Keroplatidae).

    Science.gov (United States)

    Trowell, Stephen C; Dacres, Helen; Dumancic, Mira M; Leitch, Virginia; Rickards, Rodney W

    2016-09-16

    Bioluminescence is the emission of visible light by living organisms. Here we describe the isolation and characterisation of a cDNA encoding a MW ≈ 59,000 Da luciferase from the Australian glow-worm, Arachnocampa richardsae. The enzyme is a member of the acyl-CoA ligase superfamily and produces blue light on addition of D-luciferin. These results are contrary to earlier reports (Lee, J., Photochem Photobiol 24, 279-285 (1976), Viviani, V. R., Hastings, J. W. & Wilson, T., Photochem Photobiol 75, 22-27 (2002)), which suggested glow-worm luciferase has MW ≈ 36,000 Da and is unreactive with beetle luciferin. There are more than 2000 species of firefly, which all produce emissions from D-luciferin in the green to red regions of the electromagnetic spectrum. Although blue-emitting luciferases are known from marine organisms, they belong to different structural families and use a different substrate. The observation of blue emission from a D-luciferin-using enzyme is therefore unprecedented.

  20. Directed Dynamic Small-World Network Model for Worm Epidemics in Mobile ad hoc Networks

    Institute of Scientific and Technical Information of China (English)

    ZHU Chen-Ping; WANG Li; LIU Xiao-Ting; YAN Zhi-Jun

    2012-01-01

    We investigate the worm spreading process in mobile ad hoc networks with a susceptible-infected-recovered model on a two-dimensional plane.A medium access control mechanism operates within it,inhibiting transmission and relaying a message by using other nodes inside the node's transmitting circle during speaking.We measure the rewiring probability p with the transmitting range r and the average relative velocity (v) of the moving nodes,and map the problem into a directed dynamic small-world network.A new scaling relation for the recovered portion of the nodes reveals the effect caused by geometric distance,which has been ignored by previous models.%We investigate the worm spreading process in mobile ad hoc networks with a susceptible-infected-recovered model on a two-dimensional plane. A medium access control mechanism operates within it, inhibiting transmission and relaying a message by using other nodes inside the node's transmitting circle during speaking. We measure the rewiring probability p with the transmitting range r and the average relative velocity (v) of the moving nodes, and map the problem into a directed dynamic small-world network. A new scaling relation for the recovered portion of the nodes reveals the effect caused by geometric distance, which has been ignored by previous models.

  1. 网络蠕虫传播模型的分析与仿真研究%Analysis and Simulation Research of Network Worm Propagation Model

    Institute of Scientific and Technical Information of China (English)

    查东辉

    2012-01-01

    研究网络安全问题,网络蠕虫是当前网络安全的重要威胁.网络蠕虫传播途径多样化、隐蔽性强、感染速度快等特点.蠕虫模型以简单传染病模型进行传播,无法准确描述网络蠕虫复杂变化特点,网络蠕虫检测正确率比较低.为了提高网络蠕虫检测正确率,提出一种改进的网络蠕虫传播模型.在网络蠕虫传播模型引入动态隔离策略,有效切断网络蠕虫传播途径,采用自适应的动态感染率和恢复率,降低网络蠕虫造成的不利影响.仿真结果表明,相对于经典网络蠕虫传播模型,改进模型有效地加低了网络蠕虫的传播速度,提高网络蠕虫检测正确率和整个网络安全性,为网络蠕虫传播研究提供重要指导.%Network worm is the main one threat to network security, and worms spread model is the most commonly used method. Because Internet worm transmission way has the characteristics of diversification, strong concealment, and high infection speed, the majority current worm spread models developed from the simple infectious disease model cannot accurately describe the changing rules of network worms and effectively detected network worms. In order to improve the network worm detection rate, this paper put forward an improved network worm's spread model. Dynamic isolation strategy was introduced into the network worms spread model to effectively cut off the spread ways of network worms. Adaptive dynamic infection and recovery rate were used to reduce the adverse impact of the network worms. The results of the simulation experiment show that compared with the classic network worms spread model, the improved model can decrease the network worms of propagation speed and improve the network worm detection rate and the whole network's security, and it provides an important guidance for network worms spread research.

  2. Worm Warning and Optimization of Nonlinear Propagation Model%蠕虫预警及非线性传播模型优化

    Institute of Scientific and Technical Information of China (English)

    佟晓筠; 王翥

    2011-01-01

    At present there are some worm intrusion detection systems which detect network worms only by using worm propagation properties and have high false alarm rate.This paper analyzed worm non-linear propagation models, realized the optimization of worm model, and proposed distributed worm propagation model.Then a distributed worm detection technology was designed according to the distributed worm propagation model.The system uses rule-based detection method to monitor network worms, and the console side manages and coordinates detection work of the client sides.The experimental results show that the technology is a good solution to worm warning and worm detection, which can give an alarm with high detection rate and low false alarm rate.%目前已有一些蠕虫检测系统利用蠕虫传播特性进行检测,误报率高,不能对大范围网络进行检测.为此,首先对蠕虫传播模型进行了分析和优化,提出了新蠕虫分布式传播模型.针对该模型提出了分布式蠕虫检测技术,亦即采用基于规则的检测方法监控网络蠕虫,控制台管理和协调多个检测端的工作.实验结果表明,该方法能够很好地预警蠕虫的传播行为并进行监控和报警,具有高检测率和低误报率.

  3. Ultrastructural features of the benthic dinoflagellate Ostreopsis cf. ovata (Dinophyceae).

    Science.gov (United States)

    Escalera, Laura; Benvenuto, Giovanna; Scalco, Eleonora; Zingone, Adriana; Montresor, Marina

    2014-05-01

    The toxic benthic dinoflagellate Ostreopsis cf. ovata has considerably expanded its distribution range in the last decade, posing risks to human health. Several aspects of this species are still poorly known. We studied ultrastructural features of cultivated and natural populations of Ostreopsis cf. ovata from the Gulf of Naples (Mediterranean Sea) using confocal laser scanning, and scanning and transmission electron microscopy. New information on the morphology and location of several sulcal plates was gained and a new plate designation is suggested that better fits the one applied to other Gonyaulacales. The microtubular component of the cytoskeleton, revealed using an anti-β-tubulin antibody, consisted of a cortical layer of microtubules arranged asymmetrically in the episome and in the hyposome, complemented by a complex inner microtubular system running from the sulcal area towards the internal part of the cell. The conspicuous canal was delimited by two thick, burin-shaped lobes ending in a tubular ventral opening. The canal was surrounded by mucocysts discharging their content into it. A similar structure has been reported in other benthic and planktonic dinoflagellates and may be interpreted as an example of convergent evolution in species producing large amounts of mucus.

  4. Coastal benthic diversity in the Black and Aegean Seas

    Directory of Open Access Journals (Sweden)

    A. ZENETOS

    2012-12-01

    Full Text Available Quantitative data pertaining to the composition of macrobenthic communities of soft bottoms along the coastal zones of the Black and Aegean Seas are reviewed. The study area includes one site in the Russian coastal zone, four sites in Ukraine (at depths 3-125 m, four sites in Bulgaria (at depths 12-83 m, and four sites in Greece (at depths 9-90 m. The species variety, population density and community diversity are compared between Seas, among regions and among stations. The fluctuation of these parameters in connection to anthropogenic impact (ranging from open undisturbed sites to those receiving heavy organic and chemical effluent are discussed. The low species number of benthic fauna in the Black Sea, as opposed to the richness of the Aegean Sea (three times higher a ratio well established for other marine groups, is not reflected in the overall abundance. Thus, the average population density of benthic organisms may reach 12352 ind per m2 in the Black Sea (Cocketrice sandy bank while in the Aegean it did not exceed 4,000 ind per m2 (Saronikos Gulf. Community diversity was always lower in the Black Sea than similar sites in the Aegean Sea. Within the various regions examined, the protected areas exhibited the most complex community structure.

  5. Anabaenolysins, novel cytolytic lipopeptides from benthic Anabaena cyanobacteria.

    Directory of Open Access Journals (Sweden)

    Jouni Jokela

    Full Text Available Two novel cyclic lipopeptides, anabaenolysin A and anabaenolysin B, were isolated from two benthic cyanobacterial strains of the genus Anabaena. This novel class of cyanobacterial lipopeptides has a general structure of a small peptide ring consisting of four amino acids from which two are proteinogenic and two unusual; glycine(1, glycine(2, 2-(3-amino-5-oxytetrahydrofuran-2-yl-2-hydroxyacetic acid(3 and a long unsaturated C(18 β-amino acid(4 with a conjugated triene structure. They are distinguished by the presence of a conjugated dienic structure in the C18 β-amino acid present in anabaenolysin A but not in anabaenolysin B. Conjugated triene structure generates a typical UV spectrum for anabaenolysins for easy recognition. Anabaenolysin A constituted up to 400 ppm of the cyanobacterial dry weight. We found evidence of thirteen variants of anabaenolysins in one cyanobacterial strain. This suggests that the anabaenolysins are an important class of secondary metabolites in benthic Anabaena cyanobacteria. Both anabaenolysin A and B had cytolytic activity on a number of mammalian cell lines.

  6. Resolution of paleobathymetric trends using benthic foraminiferal morphometrics

    Energy Technology Data Exchange (ETDEWEB)

    Gary, A.C.; Healy-Williams, N.

    1986-05-01

    Foraminiferal species exhibit a wide range of morphological characteristics, some of which are a reflection of the environment of their habitat. These ecophenotypic responses may provide a powerful clue to determining past depositional environments. In most morphologic studies of benthic foraminifera, relationships have been shown between test size and water depth and between surface sculpture and water depth. The authors applied an automated imaging system to examine the morphology of three species of Bolivina from the northwestern Gulf of Mexico. Two of the three species analyzed displayed clear relationships with test shape and water depth. Overall test shape appeared to be the most important discriminator of depth, but changes in the periphery (i.e., spinosity) of the foraminifera were also noted in one species. All of these results clearly indicate that the test shape of benthic foraminifera hold the possibility of providing facies information to paleontologists. Importantly, these results indicate that imaging techniques are capable of distinguishing changes in shape with depth. The quantification of these changes offers the possibility of precise and rapid depth determinations with an accuracy and resolution not possible with many other techniques.

  7. Anti-inflammatory activity in selected Antarctic benthic organisms

    Directory of Open Access Journals (Sweden)

    Juan eMoles

    2014-07-01

    Full Text Available Antarctic benthos was prospected in search for anti-inflammatory activity in polar benthic invertebrates, in two different geographical areas: deep-bottoms of the Eastern Weddell Sea and shallow-waters of the South Shetland Islands. A total of 36 benthic algae and invertebrate species were selected to perform solubility tests in order to test them for anti-inflammatory activity. From these, ethanol extracts of ten species from five different phyla resulted suitable to be studied in cell macrophage cultures (RAW 264.7. Cytotoxicity (MTT method and production of inflammatory mediators (prostaglandin E2, leukotriene B4, interleukin-1 were determined at three extract concentrations (50, 125, 250 g/mL. Bioassays resulted in four different species showing anti-inflammatory activity corresponding to three sponges: Mycale (Oxymycale acerata, Isodictya erinacea, and I. toxophila; and one hemichordate: Cephalodiscus sp. These results show that Antarctic sessile invertebrates may have great value as a source of lead compounds with potential pharmaceutical applications.

  8. Measuring coral reef community metabolism using new benthic chamber technology

    Science.gov (United States)

    Yates, K.K.; Halley, R.B.

    2003-01-01

    Accurate measurement of coral reef community metabolism is a necessity for process monitoring and in situ experimentation on coral reef health. Traditional methodologies used for these measurements are effective but limited by location and scale constraints. We present field trial results for a new benthic chamber system called the Submersible Habitat for Analyzing Reef Quality (SHARQ). This large, portable incubation system enables in situ measurement and experimentation on community- scale metabolism. Rates of photosynthesis, respiration, and calcification were measured using the SHARQ for a variety of coral reef substrate types on the reef flat of South Molokai, Hawaii, and in Biscayne National Park, Florida. Values for daily gross production, 24-h respiration, and net calcification ranged from 0.26 to 6.45 g O2 m-2 day-1, 1.96 to 8.10 g O2 m-2 24 h-1, and 0.02 to 2.0 g CaCO3 m -2 day-1, respectively, for all substrate types. Field trials indicate that the SHARQ incubation chamber is an effective tool for in situ isolation of a water mass over a variety of benthic substrate types for process monitoring, experimentation, and other applications.

  9. Predicting the Presence of Large Fish through Benthic Geomorphic Features

    Science.gov (United States)

    Knuth, F.; Sautter, L.; Levine, N. S.; Kracker, L.

    2013-12-01

    Marine Protected Areas are critical in sustaining the resilience of fish populations to commercial fishing operations. Using acoustic data to survey these areas promises efficiency, accuracy, and minimal environmental impact. In July, 2013, the NOAA Ship Pisces collected bathymetric, backscatter and water column data for 10 proposed MPA sites along the U.S. Southeast Atlantic continental shelf. A total of 205 km2 of seafloor were mapped between Mayport, FL and Wilmington, NC, using the SIMRAD ME70 and EK60 echosounder systems. These data were processed in Caris HIPS, QPS FMGT, MATLAB and ArcGIS. The backscatter and bathymetry reveal various benthic geomorphic features, including flat sand, rippled sand, and rugose hard bottom. Water column data directly above highly rugose hardbottom contains the greatest counts for large fish populations. Using spatial statistics, such as a geographically weighted regression model, we aim to identify features of the benthic profile, including rugosity, curvature and slope, that can predict the presence of large fish. The success of this approach will greatly expedite fishery surveys, minimize operational cost and aid in making timely management decisions.

  10. Spatial dynamics of benthic competition on coral reefs.

    Science.gov (United States)

    Sandin, Stuart A; McNamara, Dylan E

    2012-04-01

    The community structure of sedentary organisms is largely controlled by the outcome of direct competition for space. Understanding factors defining competitive outcomes among neighbors is thus critical for predicting large-scale changes, such as transitions to alternate states within coral reefs. Using a spatially explicit model, we explored the importance of variation in two spatial properties in benthic dynamics on coral reefs: (1) patterns of herbivory are spatially distinct between fishes and sea urchins and (2) there is wide variation in the areal extent into which different coral species can expand. We reveal that the size-specific, competitive asymmetry of corals versus fleshy algae highlights the significance of spatial patterning of herbivory and of coral growth. Spatial dynamics that alter the demographic importance of coral recruitment and maturation have profound effects on the emergent structure of the reef benthic community. Spatially constrained herbivory (as by sea urchins) is more effective than spatially unconstrained herbivory (as by many fish) at opening space for the time needed for corals to settle and to recruit to the adult population. Further, spatially unconstrained coral growth (as by many branching coral species) reduces the number of recruitment events needed to fill a habitat with coral relative to more spatially constrained growth (as by many massive species). Our model predicts that widespread mortality of branching corals (e.g., Acropora spp) and herbivorous sea urchins (particularly Diadema antillarum) in the Caribbean has greatly reduced the potential for restoration across the region.

  11. Benthic dinoflagellates from Red Sea, Egypt: Early records

    Directory of Open Access Journals (Sweden)

    Nermin El Semary

    2016-06-01

    Full Text Available Dinoflagellates from Red Sea are hardly studied, in particular the benthic forms. Samples collected from shallow intertidal zone, Ain Sokhna, Egypt were microscopically examined. Three genera with seven species were recorded. The most frequently-encountered was Katodinium sp., a small mushroom-like with epitheca being consistently larger than hypotheca. Light micrographs revealed the presence of a nucleus in the hyposome and descending cingulum. Scanning electromicrographs (SEM confirmed this orientation and revealed the presence of apical pore system. Another species showed similarity to the mushroom-like morphology but with large conical episome and small hyposome. Heterotrophic, naked Gyrodinium cf dominans and Gyrodinium sp. were also observed where in the former, there were conspicuous longitudinal striations. A frequently-observed species had naked Gyrodinium-like morphology but with much smaller size. One photosynthetic species had a characteristic stigma similar to type B eyespot in “dinotoms” and episome being slightly larger than hyposome. Gymnodinium sp. with sulcus extending slightly in the episome but deeply to the end of hyposome was also recorded. This genus is reported to be mostly toxic and its presence should be monitored. Finally, this study presents some early records for benthic dinophytes from rather underexplored locality and raises alerts about genus with reported toxicity.

  12. [The singular story of Doctor Worm -Nicholas Andry de Boisregard- and of his daughters Parasitology and Orthopaedics].

    Science.gov (United States)

    Ledermann, Walter

    2012-10-01

    Homini verminoso or Dr. Worm were the nicknames that Nicholas Aindry won in life for his consecration to the study of intestinal worms and for his bad temper, which led him to fiercely attack the surgeons. The article reassumes the studies and contributions that gave Andry the title of Father of Parasitology and the candidacy to Father of Orthopaedics, and mentions some other candidates to this honor. Quite a man, he had -besides his biological one- two famous daughters, growing till our days; wrote at least three valuable books; and planted the immortal "tree of Andry", the symbol of Orthopaedics.

  13. GROWTH OF POULTRY CHICKS FED ON FORMULATED FEED CONTAINING SILK WORM PUPAE MEAL AS PROTEIN SUPPLEMENT AND COMMERCIAL DIET

    Directory of Open Access Journals (Sweden)

    A. DUTTA

    2012-05-01

    Full Text Available Waste silkworm pupae (SWP generate vast resources of nutrients for livestock and poultry. In the present investigation, three days old chicks of RIR strain were allocated to five dietary treatments of silk worm pupae meal. The energy budget was prepared from calculated proximate analysis and growth performance of broiler chicks fed with different percentages of silk worm pupae. The result showed that the silkworm powder meal (SWPM is the cheapest and has potential to replace the costly and contaminated fish meal, as the protein source, used in poultry industry.

  14. Stable-isotope analysis of a deep-sea benthic-fish assemblage: evidence of an enriched benthic food web.

    Science.gov (United States)

    Boyle, M D; Ebert, D A; Cailliet, G M

    2012-04-01

    In this study, fishes and invertebrates collected from the continental slope (1000 m) of the eastern North Pacific Ocean were analysed using stable-isotope analysis (SIA). Resulting trophic positions (T(P) ) were compared to known diets and habitats from the literature. Dual isotope plots indicated that most species groups (invertebrates and fishes) sorted as expected along the carbon and nitrogen axes, with less intraspecific variability than interspecific variability. Results also indicated an isotopically distinct benthic and pelagic food web, as the benthic food web was more enriched in both nitrogen and carbon isotopes. Trophic positions from SIA supported this finding, resulting in the assignment of fishes to different trophic positions from those expected based on published dietary information. These differences can be explained largely by the habitat of the prey and the percentage of the diet that was scavenged. A mixing model estimated dietary contributions of prey similar to those of the known diet of Bathyraja trachura from stomach-content analysis (SCA). Linear regressions indicated that trophic positions calculated from SIA and SCA, when plotted against B. trachura total length for 32 individuals, exhibited similar variation and patterns. Only the T(P) from SCA yielded significant results (stomach content: P 0·05).

  15. Worm control practice against gastro-intestinal parasites in Norwegian sheep and goat flocks

    Directory of Open Access Journals (Sweden)

    Vatn Synnøve

    2011-05-01

    Full Text Available Abstract Background Anthelmintic treatment is the most common way of controlling nematode infections in ruminants. However, several countries have reported anthelmintic resistance (AR, representing a limitation for sustainable small ruminant production. The knowledge regarding worm control management represents a baseline to develop a guideline for preventing AR. The aim of the present study was therefore to improve our knowledge about the worm control practices in small ruminant flocks in Norway. Methods A questionnaire survey regarding worm control practices was performed in small ruminant flocks in Norway. Flocks were selected from the three main areas of small ruminant farming, i.e. the coastal, inland and northern areas. A total of 825 questionnaires, comprising 587 sheep flocks (return rate of 51.3% and 238 goat flocks (52.6% were included. Results The results indicated that visual appraisal of individual weight was the most common means of estimating the anthelmintic dose used in sheep (78.6% and goat (85.1% flocks. The mean yearly drenching rate in lambs and ewes were 2.5 ± 1.7 and 1.9 ± 1.1, respectively, whereas it was 1.0 (once a year in goats. However, these figures were higher in sheep in the coastal area with a rate of 3.4 and 2.2 in lambs and ewes, respectively. Benzimidazoles were the predominant anthelmintic class used in sheep flocks (64.9% in 2007, whereas benzimidazoles and macrocyclic lactones were both equally used in dairy goat flocks. In the period of 2005-2007, 46.3% of the sheep flocks never changed the anthelmintic class. The dose and move strategy was practiced in 33.2% of the sheep flocks. Conclusions The present study showed that inaccurate weight calculation gives a risk of under-dosing in over 90% of the sheep and goat flocks in Norway. Taken together with a high treatment frequency in lambs, a lack of anthelmintic class rotation and the common use of a dose-and-move strategy, a real danger for development of

  16. Phytoplankton reduction in near-bottom water caused by filter-feeding Nereis diversicolor - Implications for worm growth and population grazing impact

    DEFF Research Database (Denmark)

    Larsen, Poul Scheel; Riisgård, H. U.; Poulsen, L.

    1996-01-01

    reduced specific growth rate of worms at the sea floor (0.2 ± 1.1% d-1), compared to worms elevated just 10 cm above the sediment surface (2.5 ± 0.8% d-1), indicates that extremely meagre food conditions may be prevailing at the bottom. Experimental laboratory data on the development of vertical algal...

  17. Finite element analysis of contact between ZA worm and worm gear based on precise tooth surface model%基于精确齿面建模的ZA蜗杆蜗轮有限元接触分析

    Institute of Scientific and Technical Information of China (English)

    李立新; 江玉刚; 曹谊勃

    2011-01-01

    To make research on contact stress between worm and worm gear under different circumstances, and the relationship between the torsion angle of the worm and the driving torque,solid models with precise tooth surface of a ZA worm and worm gear were established based on tooth surface equations. Using these models, finite element analysis of contact was performed with ANSYS at different meshing locations under the same load and at the same meshing location under different loads, and the contact stress distribution on different meshing teeth and the load distribution among them were studied in a meshing cycle. The analysis results show that the contact stress calculated by the theoretical formula is quite smaller than the actual maximum, and that a power function is discovered between the driving torque and the torsion angle of the worm caused by elastic deformation of contact teeth, which can be used in precise angle control of the worm gear.%为了研究不同情况下蜗杆蜗轮间的接触应力和蜗杆扭转角与驱动力矩之间的关系,根据齿面方程建立具有精确齿面的ZA蜗杆蜗轮实体模型,利用ANSYS对此模型在同一载荷不同啮合位置和同一啮合位置不同载荷条件下进行有限元接触分析,研究在一个轮齿啮合周期内,各啮合齿对的接触应力分布和载荷在不同齿对上的分配情况.分析结果表明:理论接触应力计算公式给出的结果远小于实际的最大接触应力,同时得到由接触齿对弹性变形引起的蜗杆扭转角与驱动力矩之间的幂函数关系,可以用于蜗轮转角的精确控制.

  18. 一种改进的良性蠕虫传播模型%A Kind of Improved Benign Worm Propagation Model

    Institute of Scientific and Technical Information of China (English)

    吴培飞

    2013-01-01

    文章提出了一种改进的良性蠕虫传播模型,并详细分析了不同策略下恶性蠕虫与良性蠕虫的状态转换,传播动力学方程、以及恶性蠕虫和良性蠕虫的传播趋势。%In this paper, we put forward a novel revised benign worm propagation model which based on the law of worm propagation and Two-Factor model, and the analysis of the wrong illustration of the WAW worm propagation model. The detailed analysis of dynamics equation, the state transitions, as well as malicious worm and benign worm propagation trends in the 4 different strategies are given.

  19. Benthic buffers and boosters of ocean acidification on coral reefs

    Directory of Open Access Journals (Sweden)

    K. R. N. Anthony

    2013-02-01

    Full Text Available Ocean acidification is a threat to marine ecosystems globally. In shallow-water systems, however, ocean acidification can be masked by benthic carbon fluxes, depending on community composition, seawater residence time, and the magnitude and balance of net community production (pn and calcification (gn. Here, we examine how six benthic groups from a coral reef environment on Heron Reef (Great Barrier Reef, Australia contribute to changes in seawater aragonite saturation state (Ωa. Results of flume studies showed a hierarchy of responses across groups, depending on CO2 level, time of day and water flow. At low CO2 (350–450 μatm, macroalgae (Chnoospora implexa, turfs and sand elevated Ωa of the flume water by around 0.10 to 1.20 h−1 – normalised to contributions from 1 m2 of benthos to a 1 m deep water column. The rate of Ωa increase in these groups was doubled under acidification (560–700 μatm and high flow (35 compared to 8 cm s−1. In contrast, branching corals (Acropora aspera increased Ωa by 0.25 h−1 at ambient CO2 (350–450 μatm during the day, but reduced Ωa under acidification and high flow. Nighttime changes in Ωa by corals were highly negative (0.6–0.8 h−1 and exacerbated by acidification. Calcifying macroalgae (Halimeda spp. raised Ωa by day (by around 0.13 h−1, but lowered Ωa by a similar or higher amount at night. Analyses of carbon flux contributions from four different benthic compositions to the reef water carbon chemistry across Heron Reef flat and lagoon indicated that the net lowering of Ωa by coral-dominated areas can to some extent be countered by long water residence times in neighbouring areas dominated by turfs, macroalgae and potentially sand.

  20. Benthic buffers and boosters of ocean acidification on coral reefs

    Directory of Open Access Journals (Sweden)

    K. R. N. Anthony

    2013-07-01

    Full Text Available Ocean acidification is a threat to marine ecosystems globally. In shallow-water systems, however, ocean acidification can be masked by benthic carbon fluxes, depending on community composition, seawater residence time, and the magnitude and balance of net community production (NCP and calcification (NCC. Here, we examine how six benthic groups from a coral reef environment on Heron Reef (Great Barrier Reef, Australia contribute to changes in the seawater aragonite saturation state (Ωa. Results of flume studies using intact reef habitats (1.2 m by 0.4 m, showed a hierarchy of responses across groups, depending on CO2 level, time of day and water flow. At low CO2 (350–450 μatm, macroalgae (Chnoospora implexa, turfs and sand elevated Ωa of the flume water by around 0.10 to 1.20 h−1 – normalised to contributions from 1 m2 of benthos to a 1 m deep water column. The rate of Ωa increase in these groups was doubled under acidification (560–700 μatm and high flow (35 compared to 8 cm s−1. In contrast, branching corals (Acropora aspera increased Ωa by 0.25 h−1 at ambient CO2 (350–450 μatm during the day, but reduced Ωa under acidification and high flow. Nighttime changes in Ωa by corals were highly negative (0.6–0.8 h−1 and exacerbated by acidification. Calcifying macroalgae (Halimeda spp. raised Ωa by day (by around 0.13 h−1, but lowered Ωa by a similar or higher amount at night. Analyses of carbon flux contributions from benthic communities with four different compositions to the reef water carbon chemistry across Heron Reef flat and lagoon indicated that the net lowering of Ωa by coral-dominated areas can to some extent be countered by long water-residence times in neighbouring areas dominated by turfs, macroalgae and carbonate sand.

  1. Carbon fate in a large temperate human-impacted river system: Focus on benthic dynamics

    Science.gov (United States)

    Vilmin, Lauriane; Flipo, Nicolas; Escoffier, Nicolas; Rocher, Vincent; Groleau, Alexis

    2016-07-01

    Fluvial networks play an important role in regional and global carbon (C) budgets. The Seine River, from the Paris urban area to the entrance of its estuary (220 km), is studied here as an example of a large human-impacted river system subject to temperate climatic conditions. We assess organic C (OC) budgets upstream and downstream from one of the world's largest wastewater treatment plants and for different hydrological conditions using a hydrobiogeochemical model. The fine representation of sediment accumulation on the river bed allows for the quantification of pelagic and benthic effects on OC export toward the estuary and on river metabolism (i.e., net CO2 production). OC export is significantly affected by benthic dynamics during the driest periods, when 25% of the inputs to the system is transformed or stored in the sediment layer. Benthic processes also substantially affect river metabolism under any hydrological condition. On average, benthic respiration accounts for one third of the total river respiration along the studied stretch (0.27 out of 0.86 g C m-2 d-1). Even though the importance of benthic processes was already acknowledged by the scientific community for headwater streams, these results stress the major influence of benthic dynamics, and thus of physical processes such as sedimentation and resuspension, on C cycling in downstream river systems. It opens the door to new developments in the quantification of C emissions by global models, whereby biogeochemical processing and benthic dynamics should be taken into account.

  2. The Worm-Like Chain Theory And Bending Of Short DNA

    CERN Document Server

    Mazur, Alexey K

    2007-01-01

    The probability distributions for bending angles in double helical DNA obtained in all-atom molecular dynamics simulations are compared with theoretical predictions. The computed distributions remarkably agree with the worm-like chain theory for double helices of one helical turn and longer, and qualitatively differ from predictions of the semi-elastic chain model. The computed data exhibit only small anomalies in the apparent flexibility of short DNA and cannot account for the recently reported AFM data (Wiggins et al, Nature nanotechnology 1, 137 (2006)). It is possible that the current atomistic DNA models miss some essential mechanisms of DNA bending on intermediate length scales. Analysis of bent DNA structures reveals, however, that the bending motion is structurally heterogeneous and directionally anisotropic on the intermediate length scales where the experimental anomalies were detected. These effects are essential for interpretation of the experimental data and they also can be responsible for the a...

  3. On accretion of dark energy onto black- and worm-holes

    CERN Document Server

    Madrid, José A Jiménez

    2010-01-01

    We review some of the possible models that are able to describe the current Universe which point out the future singularities that could appear. We show that the study of the dark energy accretion onto black- and worm-holes phenomena in these models could lead to unexpected consequences, allowing even the avoidance of the considered singularities. We also review the debate about the approach used to study the accretion phenomenon which has appeared in literature to demonstrate the advantages and drawbacks of the different points of view. We finally suggest new lines of research to resolve the shortcomings of the different accretion methods. We then discuss future directions for new possible observations that could help choose the most accurate model.

  4. A Worm Algorithm for the Lattice CP(N-1) Model arXiv

    CERN Document Server

    Rindlisbacher, Tobias

    The CP(N-1) model in 2D is an interesting toy model for 4D QCD as it possesses confinement, asymptotic freedom and a non-trivial vacuum structure. Due to the lower dimensionality and the absence of fermions, the computational cost for simulating 2D CP(N-1) on the lattice is much lower than the one for simulating 4D QCD. However to our knowledge, no efficient algorithm for simulating the lattice CP(N-1) model has been tested so far, which also works at finite density. To this end we propose and test a new type of worm algorithm which is appropriate to simulate the lattice CP(N-1) model in a dual, flux-variables based representation, in which the introduction of a chemical potential does not give rise to any complications.

  5. Parasitic worms and allergies in childhood: insights from population studies 2008-2013.

    Science.gov (United States)

    Amoah, Abena S; Boakye, Daniel A; van Ree, Ronald; Yazdanbakhsh, Maria

    2014-05-01

    The last few decades have seen a marked increase in the global prevalence of allergic diseases particularly among children. Among the factors attributed to this rise has been reduced exposure to pathogens during childhood leading to insufficient maturation of the regulatory arm of developing immune systems. Over the years, a number of epidemiological studies have observed an inverse relationship between parasitic worm (helminth) infections and allergies. The purpose of this review is to highlight insights from population studies conducted among children published between 2008 and 2013 that explore the complex dynamics between helminth infections and allergies. These insights include the effect of anthelmintic treatment on allergic responses, an elucidation of immune mechanisms and an examination of helminth-induced immunoglobulin E cross-reactivity. A better understanding of the relationship between helminths and allergies is imperative as research directions move toward harnessing the therapeutic potential of helminths and their products in the treatment of allergic disorders.

  6. Counter-Rotatable Fan Gas Turbine Engine with Axial Flow Positive Displacement Worm Gas Generator

    Science.gov (United States)

    Giffin, Rollin George (Inventor); Murrow, Kurt David (Inventor); Fakunle, Oladapo (Inventor)

    2014-01-01

    A counter-rotatable fan turbine engine includes a counter-rotatable fan section, a worm gas generator, and a low pressure turbine to power the counter-rotatable fan section. The low pressure turbine maybe counter-rotatable or have a single direction of rotation in which case it powers the counter-rotatable fan section through a gearbox. The gas generator has inner and outer bodies having offset inner and outer axes extending through first, second, and third sections of a core assembly. At least one of the bodies is rotatable about its axis. The inner and outer bodies have intermeshed inner and outer helical blades wound about the inner and outer axes and extending radially outwardly and inwardly respectively. The helical blades have first, second, and third twist slopes in the first, second, and third sections respectively. A combustor section extends through at least a portion of the second section.

  7. Research overview of anti-backlash end face engagement worm gearing

    Directory of Open Access Journals (Sweden)

    Xingqiao DENG

    2015-04-01

    Full Text Available Eliminating the negative effect of gear backlash on transmission precision so as to achieve precise motion transformation remains a problem to be solved in the field of precision transmission. To date, optimization of manufacturing process, new transmission structure and control system are mainly used to solve the above scientific problem, however, the new transmission structure is undoubtedly the best method compared with the methods above based on the analysis of advantages and disadvantages for various methods. In doing so, this paper originally proposes a type of transmission, an anti-backlash end face engagement worm gearing, with certain advantages of no-backlash, high precision and high operating efficiency over other gears and gear systems.

  8. Worm-improved estimators in continuous-time quantum Monte Carlo

    Science.gov (United States)

    Gunacker, P.; Wallerberger, M.; Ribic, T.; Hausoel, A.; Sangiovanni, G.; Held, K.

    2016-09-01

    We derive the improved estimators for general interactions and employ these for the continuous-time quantum Monte Carlo method. Using a worm algorithm we show how measuring higher-ordered correlators leads to an improved high-frequency behavior in irreducible quantities such as the one-particle self-energy or the irreducible two-particle vertex for non-density-density interactions. A good knowledge of the asymptotics of the two-particle vertex is essential for calculating nonlocal electronic correlations using diagrammatic extensions to the dynamical mean field theory as well as for calculating susceptibilities. We test our algorithm against analytic results for the multiorbital atomic limit and the Falicov-Kimball model.

  9. Blood Components Prevent Sulfide Poisoning of Respiration of the Hydrothermal Vent Tube Worm Riftia pachyptila

    Science.gov (United States)

    Powell, Mar A.; Somero, George N.

    1983-01-01

    Respiration of plume tissue of the hydrothermal vent tube worm Riftia pachyptila is insensitive to sulfide poisoning in contrast to tissues of animals that do not inhabit vents. Permeability barriers may not be responsible for this insensitivity since plume homogenates are also resistant to sulfide poisoning. Cytochrome c oxidase of plume, however, is strongly inhibited by sulfide at concentrations less than 10 μ M. Factors present in blood, but not in cytosol, prevent sulfide from inhibiting cytochrome c oxidase. Avoidance of sulfide poisoning of respiration in Riftia pachyptila thus appears to involve a blood-borne factor having a higher sulfide affinity than that of cytochrome c oxidase, with the result that appreciable amounts of free sulfide are prevented from accumulating in the blood and entering the intracellular compartment.

  10. Prevalence of gastrointestinal round worms in calves in Sokoto, northwestern, Nigeria

    Directory of Open Access Journals (Sweden)

    Aliyu Mahmuda

    2012-10-01

    Full Text Available An investigation to determine the prevalence and distribution of gastrointestinal roundworms in calves in Sokoto metropolis was carried out. A total of 216 faecal samples from calves were examined using Modified McMaster technique for morphological egg differentiation and count of worm-egg per gram of faeces of the sampled calves. Positive samples were cultured to differentiate between morphologically indistinguishable nematode genera. An overall prevalence was found to be 133 (61.57%. Eight different nematode genera were identified with Cooperia spp being highest in prevalence (28.78% followed by Haemonchus spp (26.76% and the least was Toxocara spp (0.50%. The prevalence was generally higher in females (56.39% than in males (43.61%.

  11. Lessons from "lower" organisms: what worms, flies, and zebrafish can teach us about human energy metabolism.

    Directory of Open Access Journals (Sweden)

    Amnon Schlegel

    2007-11-01

    Full Text Available A pandemic of metabolic diseases (atherosclerosis, diabetes mellitus, and obesity, unleashed by multiple social and economic factors beyond the control of most individuals, threatens to diminish human life span for the first time in the modern era. Given the redundancy and inherent complexity of processes regulating the uptake, transport, catabolism, and synthesis of nutrients, magic bullets to target these diseases will be hard to find. Recent studies using the worm Caenorhabditis elegans, the fly Drosophila melanogaster, and the zebrafish Danio rerio indicate that these "lower" metazoans possess unique attributes that should help in identifying, investigating, and even validating new pharmaceutical targets for these diseases. We summarize findings in these organisms that shed light on highly conserved pathways of energy homeostasis.

  12. Big ideas for small brains: what can psychiatry learn from worms, flies, bees and fish?

    Science.gov (United States)

    Burne, T; Scott, E; van Swinderen, B; Hilliard, M; Reinhard, J; Claudianos, C; Eyles, D; McGrath, J

    2011-01-01

    While the research community has accepted the value of rodent models as informative research platforms, there is less awareness of the utility of other small vertebrate and invertebrate animal models. Neuroscience is increasingly turning to smaller, non-rodent models to understand mechanisms related to neuropsychiatric disorders. Although they can never replace clinical research, there is much to be learnt from 'small brains'. In particular, these species can offer flexible genetic 'tool kits' that can be used to explore the expression and function of candidate genes in different brain regions. Very small animals also offer efficiencies with respect to high-throughput screening programs. This review provides a concise overview of the utility of models based on worm, fruit fly, honeybee and zebrafish. Although these species may have small brains, they offer the neuropsychiatric research community opportunities to explore some of the most important research questions in our field.

  13. De novo assembly and characterization of the Trichuris trichiura adult worm transcriptome using Ion Torrent sequencing.

    Science.gov (United States)

    Santos, Leonardo N; Silva, Eduardo S; Santos, André S; De Sá, Pablo H; Ramos, Rommel T; Silva, Artur; Cooper, Philip J; Barreto, Maurício L; Loureiro, Sebastião; Pinheiro, Carina S; Alcantara-Neves, Neuza M; Pacheco, Luis G C

    2016-07-01

    Infection with helminthic parasites, including the soil-transmitted helminth Trichuris trichiura (human whipworm), has been shown to modulate host immune responses and, consequently, to have an impact on the development and manifestation of chronic human inflammatory diseases. De novo derivation of helminth proteomes from sequencing of transcriptomes will provide valuable data to aid identification of parasite proteins that could be evaluated as potential immunotherapeutic molecules in near future. Herein, we characterized the transcriptome of the adult stage of the human whipworm T. trichiura, using next-generation sequencing technology and a de novo assembly strategy. Nearly 17.6 million high-quality clean reads were assembled into 6414 contiguous sequences, with an N50 of 1606bp. In total, 5673 protein-encoding sequences were confidentially identified in the T. trichiura adult worm transcriptome; of these, 1013 sequences represent potential newly discovered proteins for the species, most of which presenting orthologs already annotated in the related species T. suis. A number of transcripts representing probable novel non-coding transcripts for the species T. trichiura were also identified. Among the most abundant transcripts, we found sequences that code for proteins involved in lipid transport, such as vitellogenins, and several chitin-binding proteins. Through a cross-species expression analysis of gene orthologs shared by T. trichiura and the closely related parasites T. suis and T. muris it was possible to find twenty-six protein-encoding genes that are consistently highly expressed in the adult stages of the three helminth species. Additionally, twenty transcripts could be identified that code for proteins previously detected by mass spectrometry analysis of protein fractions of the whipworm somatic extract that present immunomodulatory activities. Five of these transcripts were amongst the most highly expressed protein-encoding sequences in the T

  14. Influence of immunoprotection on genetic variability of cysteine proteinases from Haemonchus contortus adult worms.

    Science.gov (United States)

    Martín, S; Molina, J M; Hernández, Y I; Ferrer, O; Muñoz, Ma C; López, A; Ortega, L; Ruiz, A

    2015-11-01

    The limitations associated with the use of anthelmintic drugs in the control of gastrotintestinal nematodosis, such as the emergence of anthelmintic resistance, have stimulated the study of the immunological control of many parasites. In the case of Haemonchus contortus, several vaccination trials using native and recombinant antigens have been conducted. A group of antigens with demonstrated immunoprotective value are cathepsin B - like proteolytic enzymes of the cysteine proteinase type. These enzymes, which have been observed in both excretory-secretory products and somatic extracts of H. contortus, may vary among different geographic isolates and on strains isolated from different hosts, or even from the same host, as has been demonstrated in some comparative studies of genetic variability. In the present study, we evaluated the genetic variability of the worms that fully developed their endogenous cycle in immunised sheep and goat in order to identify the alleles of most immunoprotective value. To address these objectives, groups of sheep and goats were immunised with PBS soluble fractions enriched for cysteine proteinases from adult worms of H. contortus from either a strain of H. contortus isolated from goats of Gran Canaria Island (SP) or a strain isolated from sheep of North America (NA). The results confirmed the immunoprophylactic value of this type of enzyme against haemonchosis in both sheep and goats in association with increased levels of specific IgG. The genetic analysis demonstrated that the immunisation had a genetic selection on proteinase-encoding genes. In all the immunised animals, allelic frequencies were statistically different from those observed in non-immunised control animals in the four analysed genes. The reduction in the allelic frequencies suggests that parasites expressing these proteases are selectively targeted by the vaccine, and hence they should be considered in any subunit vaccine approach to control haemonchosis in small

  15. Accounting for Film-Forming and Damping Properties of Lubricants in Worm Gear Design

    Directory of Open Access Journals (Sweden)

    S. A. Polyakov

    2014-01-01

    Full Text Available The paper offers to use a curve of changing vibration amplitude of the rotating moment on the worm shaft of reducer in the process of growing brake (loading moment as one of criteria of the worm reducer operability. A condition of reducer operability at the nominal moment is lack of vibrations of the rotating moment with a critical value of amplitude.It is shown that vibrations of rotating moment on a shaft of the electric engine, by their nature, are self-vibrations in the system with "negative friction". Values of the brake moment at which there is a sharp increase of vibration amplitude leading to operability loss correspond to the nominal moment for this reducer or to the brake moment, corresponding to the maximum efficiency. It is shown that different lubricants differently influence on the generation of self-vibrations. The most efficient damping occurs when using oil with the additive "Striboil", and the reason of falling efficiency at the excess of the nominal moment is essentially increased energy losses at generation of vibrations with "negative friction", especially when approaching to the resonance area. Thus, taking into account a nature of damping vibrations, with using different lubricants, allows us to increase the permissible tension since the more is a damping value the more is a brake moment corresponding to the maximum efficiency. It is noted that, when using the additives to oils, a growth of the permissible tension is caused by the processes of film formation increasing the real contact area, which increases its share of the nominal contact area determined by the Hertz formula.

  16. Arsenic concentrations and species in three hydrothermal vent worms, Ridgeia piscesae, Paralvinella sulficola and Paralvinella palmiformis

    Science.gov (United States)

    Maher, W. A.; Duncan, E.; Dilly, G.; Foster, S.; Krikowa, F.; Lombi, E.; Scheckel, K.; Girguis, P.

    2016-10-01

    Hydrothermal vents are surficial expressions of subsurface geological and hydrological processes. Fluids emitting from active vents are chemically distinct from bottom seawater, and are enriched in dissolved metals and metalloids, including arsenic. Vent organisms accumulate arsenic but the arsenic speciation in these non-photosynthetic organisms is largely unknown. Here, arsenic concentrations and chemical species were measured in three deep sea hydrothermal vent worms (Ridgeia piscesae, Paralvinella sulfincola and Paralvinella palmiformis) from the Juan de Fuca Ridge in the Northwest pacific. R. piscesae has similar arsenic concentrations (3.8-35 μg g-1) to shallow water polychaetes while P. sulfincola and P. palmiformis have significantly higher arsenic concentrations (420-1417 and 125-321 μg g-1 respectively). R. piscesae contains appreciable quantities of inorganic arsenic (36±14%), monomethyl arsenic (2±2%), dimethyl arsenic (34±21%), an unknown methyl arsenical (7±16%), OSO3-arsenosugar (5±9%), TETRA (4±5%), ThioPO4/ThioDMAE (1±2%) and an unknown thio-arsenical (12±14%). These results suggests that host and symbionts are either involved in the methylation of arsenic, or are bathed in fluids enriched in methylated arsenic as a result of free-living microbial activity. The host carrying out methylation, however, cannot be ruled out. In contrast, 96-97% of the arsenic in P. sulfincola and P. palmiformis is inorganic arsenic, likely the result of arsenic precipitation within and upon the mucus they ingest while feeding. While all worms have oxo- and thio arsenosugars (2-30%), Paralvinella also have small amounts of arsenobetaine (arsenic species in the absence of photosynthesising algae/bacteria indicates that they may be formed by vent animals in the absence of sunlight, but at this time their formation cannot be explained.

  17. Effects of water temperature and substrate type on spore production and release in eastern Tubifex tubifex worms infected with Myxobolus cerebralis

    Science.gov (United States)

    Blazer, V.S.; Waldrop, T.B.; Schill, W.B.; Densmore, Christine L.; Smith, D.

    2003-01-01

    Eastern Tubifex tubifex worms were exposed to Myxobolus cerebralis spores at 9, 13, 17, and 20 C in 1-L jars that contained sand, mud, or leaf litter as substrata. Beginning 60 days after exposure, water from each jar was filtered daily and examined for the presence of waterborne triactinomyxon spores (TAMs). On discovering a single TAM from an experimental jar, 48 T. tubifex worms from that jar were placed individually into 24-well plates. Spores released from individual infected T. tubifex worms were quantified to determine the first day of TAM release from infected worms, the infection rate, the total number of TAMs released per worm, and the duration of release. No TAMs were found in any of the jars incubated at 20 C or in uninfected, control worms at any temperature. The total number of TAMs released by infected worms in mud and sand was highest at 13 C compared with other temperatures. Infection rates among individual worms increased with temperature between 9 and 17 C. Higher temperatures (up to 17 C) induced earlier TAM releases among infected worms, and substratum did not influence this production parameter. The average duration of TAM release decreased as the temperature increased from 9 to 17 C, and there was a significant effect of substratum in the groups maintained at 13 and 17 C. In all temperature treatments between 9 and 17 C, the duration of release was least in the worms maintained in leaf litter, as was the total number of TAMs released during the experimental period and the median number of TAMs per production day.

  18. Knowledge and practice of worm infection among mothers of school going children of Arba VDC, Kaski, Nepal

    Directory of Open Access Journals (Sweden)

    Gnanakshi. Dayanand

    2015-03-01

    Full Text Available Background Parasitic worms (helminths, are serious threat to life. A good knowledge of worm infection among the mothers of child bearing age could help to improve the scenario. The present study aimed to obtain the scenario of the knowledge, and practice of helminth infection in relation to the community’s existing knowledge in a village of western Nepal. Methods The present research work was conducted between 01-07-2014 to 31-07-2014 with a structured questionnaire in Arba VDC, Kaski, Nepal Results Majority of the mothers were in the age group of 26-30 years, followed by 31-35 years and <25 years. Among the 26-30 years age group mothers, knowledge score was relatively good. Brahmins had highest good knowledge score. Among Hindus knowledge score was more comparing with Buddhists. Practice score was good for almost all participants. Conclusion This study has showed a need for more awareness of worm infections for a better health. Governmental policies regarding health education need to increase knowledge of worm infections also important in this context.

  19. Influence of zinc nanoparticles on survival of worms Eisenia fetida and taxonomic diversity of the gut microflora.

    Science.gov (United States)

    Yausheva, Еlena; Sizova, Еlena; Lebedev, Svyatoslav; Skalny, Anatoliy; Miroshnikov, Sergey; Plotnikov, Andrey; Khlopko, Yuri; Gogoleva, Natalia; Cherkasov, Sergey

    2016-07-01

    The study was conducted to examine the effect of zinc nanoparticles on survival of worms Eisenia fetida and composition of the gut microflora. Analysis of the survival data has shown that the introduction of high doses of the nanoparticles causes death of worms in the second group with 35 % mortality rate and activates protective mechanisms realized as mucous film. DNA from the worm guts was extracted and 16S metagenomic sequencing was fulfilled using MiSeq (Illumina). Regarding the gut microflora of worms in the control group, high diversity of microorganisms (303 OTUs) was noted. Most of those belong to the taxa Firmicutes (51.9 % of the total high-quality united reads), Proteobacteria (24.1 % of the total), and Actinobacteria (13.3 % of the total), which were represented by numerous species of gen. Clostridium (C. saccharobutylicum, C. saccharoperbutylacetonicum, C. beijerinckii), gen. Pseudomonas (P. hydrogenovora, P. aeruginosa, and P. putida), gen. Bacillus (B. megaterium, B. silvestris), gen. Cellulomonas (B. megaterium, B. silvestris), and other numerically smaller genera. Adding of zinc nanoparticles to the substrate decreased the diversity of bacteria (78 OTUs) as well as percentage of bacteria belonging to the taxon Firmicutes (-41.6 %) and increased the proportion of Proteobacteria due to growth in abundance of gen. Verminephrobacter (+46 %) and gen. Ochrobactrum (+19.5 %).

  20. Selection of Immunogenic Peptide Mimics of Male Worm Origin of Schistosoma Japonicum using Phage Display Peptide Library

    Institute of Scientific and Technical Information of China (English)

    陈欲晓; 易新元; 曾宪芳; 王林纤; 唐连飞; 章洁; McreynoldsLarry

    2004-01-01

    To select the immunogenic short peptide mimics of male worm origin of Schistosoma japonicum (Sj) and to explore their protection effect against schistosomiasis in mice, the random phage display peptide hbrary of 12 - mer was screened with IgG to soluble male worm antigen of Sj, and the specific positive clones selected through three rounds of screenings were detected by Dot-ELISA, and then injected subcutaneously into mice for vaccination and protection assessment against Sj. It was found that 18 randomly picked phage displayed clones all showed definite antigenicity with various intensities. The pooled phages displayed clones could induce production of specific antibodies and cause 31.72% of worm reduction rate and 51.54 % of egg reduction rate in mice, revealing a significant difference ( P < 0. 001 ) in comparison with those of the controls. It concludes that the short peptide mimics of male worm origin of Sj obtained by affinity screening phage display ptide library can elicit partial protection against this pathogen.

  1. The carbon to nitrogen ratio in isoenergetic wheat based diets controls the growth rate of the aquatic worm Lumbriculus variegatus

    NARCIS (Netherlands)

    Laarhoven, B.; Elissen, H.J.H.; Buisman, C.J.N.; Temmink, H.

    2016-01-01

    The aquatic worm Lumbriculus variegatus (Lv) contains high levels of proteins and can provide an excellent fish food. Large-scale production of Lv on low value organic substrates, such as by-products produced during wheat processing, therefore can be a promising and sustainable concept for the aquac

  2. Accumulation of polycyclic aromatic hydrocarbons from creosote-contaminated soil in selected plants and the oligochaete worm Enchytraeus crypticus

    Energy Technology Data Exchange (ETDEWEB)

    Ann-Sofie Allard; Marianne Malmberg; Alasdair H. Neilson; Mikael Remberger [IVL, Stockholm (Sweden). Swedish Environmental Research Institute

    2005-07-01

    The accumulation of PAHs from a creosote-contaminated soil was examined in laboratory experiments using English ryegrass (Lolium perenne), white clover (Trifolium repens) and radish (Raphanus sativus), and the oligochaete worm Enchytraeus crypticus. Toxicity to the plants and the worms was assessed, and a soil sample mixed with calcined sand was used for accumulation experiments to avoid interference from toxicity in the soil. Accumulation of potentially carcinogenic PAHs varied among the plants, and there was a linear relation between concentrations of PAHs in the soil and in the plants. Correlations between values of the biota-soil accumulation factors and octanol-water partition coefficients, or water solubility varied among the plants and were rather weak, so that lipophilic character or water solubility of the PAHs alone cannot explain PAH accumulation. Accumulation of carcinogenic PAHs from the soil, in the presence of the other PAHs was greatest for Trifolium repens. PAHs were accumulated in the oligochaete worm (Enchytraeus crypticus), and biota-soil accumulation factors exceeded those for the plants. It is suggested that site-specific evaluation of contaminated sites should include not only chemical analysis and evaluation of toxicity but also accumulation of contaminants into biota such as plants and worms.

  3. WormClassroom.org: An Inquiry-Rich Educational Web Portal for Research Resources of "Caenorhabditis elegans"

    Science.gov (United States)

    Lu, Fong-Mei; Eliceiri, Kevin W.; Stewart, James; White, John G.

    2007-01-01

    The utilization of biology research resources, coupled with a "learning by inquiry" approach, has great potential to aid students in gaining an understanding of fundamental biological principles. To help realize this potential, we have developed a Web portal for undergraduate biology education, WormClassroom.org, based on current research…

  4. Worm burdens in outbred and inbred laboratory rats with morphometric data on Syphacia muris (Yamaguti, 1935 Yamaguti, 1941 (Nematoda, Oxyuroidea

    Directory of Open Access Journals (Sweden)

    Roberto Magalhães Pinto

    2001-01-01

    Full Text Available Syphacia muris worm burdens were evaluated in the rat Rattus norvegicus of the strains Wistar (outbred, Low/M and AM/2/Torr (inbred, maintained conventionally in institutional animal houses in Brazil. Morphometrics and illustration data for S. muris recovered from Brazilian laboratory rats are provided for the first time since its proposition in 1935.

  5. Phenotypic plasticity in adult worms of Schistosoma mansoni (Trematoda:Schistosomatidae evidenced by brightfield and confocal laser scanning microscopies

    Directory of Open Access Journals (Sweden)

    Renata Heisler Neves

    2004-03-01

    Full Text Available A comparative morphometric study was performed to identify host-induced morphological alterations in Schistosoma mansoni adult worms. A wild parasite population was obtained from a naturally infected rodent (Nectomys squamipesand then recovered from laboratory infected C3H/He mice. Furthermore, allopatric worm populations maintained for long-term under laboratory conditions in Swiss Webster mice were passed on to N. squamipes. Suckers and genital system (testicular lobes, uterine egg, and egg spine were analyzed by a digital system for image analysis. Confocal laser scanning microscopy (CLSM showed details of the genital system (testicular lobes, vitelline glands, and ovary and the tegument just below the ventral sucker. Significant morphological changes (p < 0.05 were detected in male worms in all experimental conditions, with no significant variability as assessed by CLSM. Significant changes (p < 0.05 were evident in females from the wild population related to their ovaries and vitelline glands, whereas allopatric females presented differences only in this last character. We conclude that S. mansoni worms present the phenotypic plasticity induced by modifications in the parasite's microenvironment, mainly during the first passage under laboratory conditions.

  6. The effect of iron fortification and de-worming on anaemia and iron status of Vietnamese schoolchildren

    NARCIS (Netherlands)

    Thi, Le H.; Brouwer, I.A.; Khan, N.C.; Burema, J.; Kok, F.J.

    2007-01-01

    Previous data from Vietnam show that anaemia is highly prevalent among schoolchildren, who are considered not to be iron deficient. Trichuris infection doubled the risk of anaemia. The present study aimed to evaluate the hypothesis that de-worming is more effective than iron fortification in an anae

  7. Experimental Ascaris suum infection in the pig: protective memory response after three immunizations and effect of intestinal adult worm population

    DEFF Research Database (Denmark)

    Jungersen, Gregers; Eriksen, Lis; Roepstorff, Allan

    1999-01-01

    unreported 10 kDa band, specific to the L2 larval stage and egg hatch fluid, emerged in all pigs after challenge, while the major adult body fluid constituent, ABA-1, remained unrecognized. No significant effect of an intestinal adult worm burden on the larval recovery after a challenge inoculation...

  8. Environmental Drivers of Benthic Flux Variation and Ecosystem Functioning in Salish Sea and Northeast Pacific Sediments.

    Directory of Open Access Journals (Sweden)

    Rénald Belley

    Full Text Available The upwelling of deep waters from the oxygen minimum zone in the Northeast Pacific from the continental slope to the shelf and into the Salish Sea during spring and summer offers a unique opportunity to study ecosystem functioning in the form of benthic fluxes along natural gradients. Using the ROV ROPOS we collected sediment cores from 10 sites in May and July 2011, and September 2013 to perform shipboard incubations and flux measurements. Specifically, we measured benthic fluxes of oxygen and nutrients to evaluate potential environmental drivers of benthic flux variation and ecosystem functioning along natural gradients of temperature and bottom water dissolved oxygen concentrations. The range of temperature and dissolved oxygen encountered across our study sites allowed us to apply a suite of multivariate analyses rarely used in flux studies to identify bottom water temperature as the primary environmental driver of benthic flux variation and organic matter remineralization. Redundancy analysis revealed that bottom water characteristics (temperature and dissolved oxygen, quality of organic matter (chl a:phaeo and C:N ratios and sediment characteristics (mean grain size and porosity explained 51.5% of benthic flux variation. Multivariate analyses identified significant spatial and temporal variation in benthic fluxes, demonstrating key differences between the Northeast Pacific and Salish Sea. Moreover, Northeast Pacific slope fluxes were generally lower than shelf fluxes. Spatial and temporal variation in benthic fluxes in the Salish Sea were driven primarily by differences in temperature and quality of organic matter on the seafloor following phytoplankton blooms. These results demonstrate the utility of multivariate approaches in differentiating among potential drivers of seafloor ecosystem functioning, and indicate that current and future predictive models of organic matter remineralization and ecosystem functioning of soft-muddy shelf and

  9. Global coordination and standardisation in marine biodiversity through the World Register of Marine Species (WoRMS and related databases.

    Directory of Open Access Journals (Sweden)

    Mark J Costello

    Full Text Available The World Register of Marine Species is an over 90% complete open-access inventory of all marine species names. Here we illustrate the scale of the problems with species names, synonyms, and their classification, and describe how WoRMS publishes online quality assured information on marine species. Within WoRMS, over 100 global, 12 regional and 4 thematic species databases are integrated with a common taxonomy. Over 240 editors from 133 institutions and 31 countries manage the content. To avoid duplication of effort, content is exchanged with 10 external databases. At present WoRMS contains 460,000 taxonomic names (from Kingdom to subspecies, 368,000 species level combinations of which 215,000 are currently accepted marine species names, and 26,000 related but non-marine species. Associated information includes 150,000 literature sources, 20,000 images, and locations of 44,000 specimens. Usage has grown linearly since its launch in 2007, with about 600,000 unique visitors to the website in 2011, and at least 90 organisations from 12 countries using WoRMS for their data management. By providing easy access to expert-validated content, WoRMS improves quality control in the use of species names, with consequent benefits to taxonomy, ecology, conservation and marine biodiversity research and management. The service manages information on species names that would otherwise be overly costly for individuals, and thus minimises errors in the application of nomenclature standards. WoRMS' content is expanding to include host-parasite relationships, additional literature sources, locations of specimens, images, distribution range, ecological, and biological data. Species are being categorised as introduced (alien, invasive, of conservation importance, and on other attributes. These developments have a multiplier effect on its potential as a resource for biodiversity research and management. As a consequence of WoRMS, we are witnessing improved

  10. Benthic exchange and biogeochemical cycling in permeable sediments.

    Science.gov (United States)

    Huettel, Markus; Berg, Peter; Kostka, Joel E

    2014-01-01

    The sandy sediments that blanket the inner shelf are situated in a zone where nutrient input from land and strong mixing produce maximum primary production and tight coupling between water column and sedimentary processes. The high permeability of the shelf sands renders them susceptible to pressure gradients generated by hydrodynamic and biological forces that modulate spatial and temporal patterns of water circulation through these sediments. The resulting dynamic three-dimensional patterns of particle and solute distribution generate a broad spectrum of biogeochemical reaction zones that facilitate effective decomposition of the pelagic and benthic primary production products. The intricate coupling between the water column and sediment makes it challenging to quantify the production and decomposition processes and the resultant fluxes in permeable shelf sands. Recent technical developments have led to insights into the high biogeochemical and biological activity of these permeable sediments and their role in the global cycles of matter.

  11. Methods applied in studies of benthic marine debris.

    Science.gov (United States)

    Spengler, Angela; Costa, Monica F

    2008-02-01

    The ocean floor is one of the main accumulation sites of marine debris. The study of this kind of debris still lags behind that of shorelines. It is necessary to identify the methods used to evaluate this debris and how the results are presented and interpreted. From the available literature on benthic marine debris (26 studies), six sampling methods were registered: bottom trawl net, sonar, submersible, snorkeling, scuba diving and manta tow. The most frequent method used was bottom trawl net, followed by the three methods of diving. The majority of the debris was classified according to their former use and the results usually expressed as items per unity of area. To facilitate comparisons of the contamination levels among sites and regions some standardization requirements are suggested.

  12. Molar tooth carbonates and benthic methane fluxes in Proterozoic oceans

    Science.gov (United States)

    Shen, Bing; Dong, Lin; Xiao, Shuhai; Lang, Xianguo; Huang, Kangjun; Peng, Yongbo; Zhou, Chuanming; Ke, Shan; Liu, Pengju

    2016-01-01

    Molar tooth structures are ptygmatically folded and microspar-filled structures common in early- and mid-Proterozoic (~2,500-750 million years ago, Ma) subtidal successions, but extremely rare in rocks isotopes, we show that molar tooth structures may have formed within sediments where microbial sulphate reduction and methanogenesis converged. The convergence was driven by the abundant production of methyl sulphides (dimethyl sulphide and methanethiol) in euxinic or H2S-rich seawaters that were widespread in Proterozoic continental margins. In this convergence zone, methyl sulphides served as a non-competitive substrate supporting methane generation and methanethiol inhibited anaerobic oxidation of methane, resulting in the buildup of CH4, formation of degassing cracks in sediments and an increase in the benthic methane flux from sediments. Precipitation of crack-filling microspar was driven by methanogenesis-related alkalinity accumulation. Deep ocean ventilation and oxygenation around 750 Ma brought molar tooth structures to an end.

  13. Selective responses of benthic foraminifera to thermal pollution.

    Science.gov (United States)

    Titelboim, Danna; Almogi-Labin, Ahuva; Herut, Barak; Kucera, Michal; Schmidt, Christiane; Hyams-Kaphzan, Orit; Ovadia, Ofer; Abramovich, Sigal

    2016-04-15

    Persistent thermohaline pollution at a site along the northern coast of Israel, due to power and desalination plants, is used as a natural laboratory to evaluate the effects of rising temperature and salinity levels on benthic foraminifera living in shallow hard-bottom habitats. Biomonitoring of the disturbed area and a control station shows that elevated temperature is a more significant stressor compared to salinity, thus causing a decrease in abundance and richness. Critical temperature thresholds were observed at 30 and 35°C, the latter representing the most thermally tolerant species in the studied area Pararotalia calcariformata, which is the only symbiont-bearing species observed within the core of the heated area. Common species of the shallow hard-bottom habitats including several Lessepsian invaders are almost absent in the most exposed site indicating that excess warming will likely impede the survival of these species that currently benefit from the ongoing warming of the Eastern Mediterranean.

  14. From Greenland to green lakes: Cultural eutrophication and the loss of benthic pathways in lakes

    DEFF Research Database (Denmark)

    Vadeboncoeur, Y.; Jeppesen, E.; Zanden, M. J. V.

    2003-01-01

    with TP . 100 mg m23, phytoplankton were responsible for nearly 100% of primary production. Benthic contributions ranged from 5 to 80% depending on morphometry and littoral habitat composition in lakes with intermediate phosphorus concentrations. Thus, eutrophication was characterized by a switch from...... benthic to pelagic dominance of primary productivity. Carbon stable isotope analysis showed that the redistribution of primary production entailed a similar shift from periphyton to phytoplankton in the diets of zoobenthos. Benthic and pelagic habitats were energetically linked through food web...

  15. Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

    DEFF Research Database (Denmark)

    Stief, P.

    2013-01-01

    Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal......-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen...... that contributes to global warming. Overall, benthic macrofauna intensifies the coupling between benthos, pelagial, and atmosphere through enhanced turnover and transport of nitrogen....

  16. Novel developments in benthic modelling to address scientific and policy challenges

    Science.gov (United States)

    Lessin, Gennadi; Artioli, Yuri; Bruggeman, Jorn; Aldridge, John; Blackford, Jerry

    2016-04-01

    Understanding the role of benthic systems in supporting, regulating and providing marine ecosystem services requires better understanding of their functioning and their response and resilience to stressors. Novel observational methods for the investigation of dynamics of benthic-pelagic coupling in shelf seas are being developed and new data is being collected. Therefore there is an increasing demand for robust representation of benthic processes in marine biogeochemical and ecosystem models, which would improve our understanding of whole systems and benthic-pelagic coupling, rather than act as mere closure terms for pelagic models. However, for several decades development of benthic models has lagged behind their pelagic counterparts. To address contemporary scientific, policy and societal challenges, the biogeochemical and ecological model ERSEM (European Regional Seas Ecosystem Model), including its benthic sub-model, was recently recoded in a scalable and modular format adopting the approach of FABM (Framework for Aquatic Biogeochemical Models). Within the Shelf Sea Biogeochemistry research programme, a series of additional processes have been included, such as a sedimentary carbonate system, a resuspendable fluff layer, and the simulation of advective sediments. It was shown that the inclusion of these processes changes the dynamics of benthic-pelagic fluxes as well as modifying the benthic food web. Comparison of model results with in-situ data demonstrated a general improvement of model performance and highlighted the importance of the benthic system in overall ecosystem dynamics. As an example, our simulations have shown that inclusion of a resuspendable fluff layer facilitates regeneration of inorganic nutrients in the water column due to degradation of resuspended organic material by pelagic bacteria. Moreover, the composition of fluff was found to be important for trophic interactions, and therefore indirectly affects benthic community composition. Where

  17. Scientometric trends of freshwater benthic invertebrates studies in Brazil

    Directory of Open Access Journals (Sweden)

    Ana Lúcia Brandimarte

    Full Text Available Abstract: Aim The aim of this paper is to analyze trends in the literature concerning benthic invertebrates in Brazil, mainly the number of published papers and approaches used. Methods The Ph.D. database of the Lattes Platform (CNPq was used as the source of information for the period 1970-2014. We searched for the terms “benthos”, “macroinvertebrates”, and “zoobenthos” in the titles and keywords of the papers listed on the platform. Papers were classified into the following categories: Systematics, Life History, Ecology, and Divulgation. These categories were further divided into subcategories. The percentage of papers in every major category and subcategory was calculated. Results The search introduced 1,573 papers, which were mainly related to Ecology and Systematics. From 1970 to 2009, the number of papers published per decade increased exponentially, and the upward trend continues. The number of papers concerning Systematics, especially in Taxonomy, is increasing. Of the papers in Ecology category, those about Structure, Dynamics, and Distribution of the fauna have been increasing since the 1980s, and there has been an evident increase in the production of papers related to environmental damage in the last decade. The rate of production of papers concerning the role of invertebrates in ecosystems and the effects of different Spatial Scales has been increasing since the 2000s. Conclusion There is a clear tendency towards the increased continuity of paper production concerning freshwater benthic invertebrates, and relatively new approaches as Conservation and Exotic Species are becoming relevant.

  18. Effects of triclosan on marine benthic and epibenthic organisms.

    Science.gov (United States)

    Perron, Monique M; Ho, Kay T; Cantwell, Mark G; Burgess, Robert M; Pelletier, Marguerite C

    2012-08-01

    Triclosan is an antimicrobial compound that has been widely used in consumer products such as toothpaste, deodorant, and shampoo. Because of its widespread use, triclosan has been detected in various environmental media, including wastewater, sewage sludge, surface waters, and sediments. Triclosan is acutely toxic to numerous aquatic organisms, but very few studies have been performed on estuarine and marine benthic organisms. For whole sediment toxicity tests, the sediment-dwelling estuarine amphipod, Ampelisca abdita, and the epibenthic mysid shrimp, Americamysis bahia, are commonly used organisms. In the present study, median lethal concentration values (LC50) were obtained for both of these organisms using water-only and whole sediment exposures. Acute 96-h water-only toxicity tests resulted in LC50 values of 73.4 and 74.3 µg/L for the amphipod and mysid, respectively. For the 7-d whole sediment toxicity test, LC50 values were 303 and 257 mg/kg (dry wt) for the amphipod and mysid, respectively. Using equilibrium partitioning theory, these whole sediment values are equivalent to interstitial water LC50 values of 230 and 190 µg/L for the amphipod and mysid, respectively, which are within a threefold difference of the observed 96-h LC50 water-only values. Triclosan was found to accumulate in polychaete tissue in a 28-d bioaccumulation study with a biota-sediment accumulation factor of 0.23 kg organic carbon/kg lipid. These data provide some of the first toxicity data for triclosan with marine benthic and epibenthic species while also indicating a need to better understand the effects of other forms of sediment carbon, triclosan ionization, and organism metabolism of triclosan on the chemical's behavior and toxicity in the aquatic environment.

  19. Phototoxicity of TiO{sub 2} nanoparticles to a freshwater benthic amphipod: Are benthic systems at risk?

    Energy Technology Data Exchange (ETDEWEB)

    Li, Shibin, E-mail: li.shibin@epa.gov [U.S. Environmental Protection Agency, Office of Research and Development, National Health and Environmental Effects Research Laboratory, Mid-Continent Ecology Division, Duluth, MN (United States); Wallis, Lindsay K.; Ma, Hongbo [U.S. Environmental Protection Agency, Office of Research and Development, National Health and Environmental Effects Research Laboratory, Mid-Continent Ecology Division, Duluth, MN (United States); Diamond, Stephen A. [Nanosafe Inc., Blacksburg, VA (United States)

    2014-01-01

    This study investigated phototoxicity of TiO{sub 2} nanoparticles (nano-TiO{sub 2}) to a freshwater benthic amphipod (Hyalella azteca) using 48-h and 96-h bioassays. Thorough monitoring of particle interactions with exposure media (Lake Superior water, LSW) and the surface of organisms was performed using dynamic light scattering, UV/Vis spectroscopy, and Scanning Electron Microscopy. Large agglomeration and sedimentation (> 77%) in LSW was observed after 0.5 h. A simulated solar radiation (SSR)-favored surface attachment of nanoparticles was observed, indicating enhanced phototoxicity with the increased attachment. A 96-h median lethal concentration (LC50) of 29.9 mg/L in H. azteca was calculated, with a daily 4-h UV exposure of 2.2 W/m{sup 2}. Phototoxicity of nano-TiO{sub 2} under SSR had a 21-fold increase as compared to that under ambient laboratory light. This phototoxicity was also dependent on UV dose, with calculated LC50s around 22.9 (95% CI, 20.5–23.3) Wh/m{sup 2} when exposed to 20 mg/L nano-TiO{sub 2}. Also, H. azteca exhibited negative phototaxis in the presence of shelters, indicating that other factors might play a role in environmental systems. Finally, the environmental implications of nano-TiO{sub 2} to benthic organisms were illustrated, emphasizing the importance of various environmental factors in the ultimate phototoxicity. This increased phototoxicity and its complex interactions with various environmental factors suggest further investigations are needed for future risk assessment of photoactive nanomaterials to benthic organisms. - Graphical abstract: Display Omitted - Highlights: •Large aggregation of TiO{sub 2} nanoparticles in Lake Superior water was observed. •Phototoxicity was dependent on the dose of both solar radiation and nanoparticle. •A solar radiation favored surface attachment of nanoparticles was observed. •Hyalella azteca exhibited negative phototaxis in the presence of shelters. •Factors influencing

  20. Multivariate benthic ecosystem functioning in the Arctic – benthic fluxes explained by environmental parameters in the southeastern Beaufort Sea

    Directory of Open Access Journals (Sweden)

    H. Link

    2013-09-01

    Full Text Available The effects of climate change on Arctic marine ecosystems and their biogeochemical cycles are difficult to predict given the complex physical, biological and chemical interactions among the ecosystem components. We studied benthic biogeochemical fluxes in the Arctic and the influence of short-term (seasonal to annual, long-term (annual to decadal and other environmental variability on their spatial distribution to provide a baseline for estimates of the impact of future changes. In summer 2009, we measured fluxes of dissolved oxygen, nitrate, nitrite, ammonia, soluble reactive phosphate and silicic acid at the sediment–water interface at eight sites in the southeastern Beaufort Sea at water depths from 45 to 580 m. The spatial pattern of the measured benthic boundary fluxes was heterogeneous. Multivariate analysis of flux data showed that no single or reduced combination of fluxes could explain the majority of spatial variation, indicating that oxygen flux is not representative of other nutrient sink–source dynamics. We tested the influence of eight environmental parameters on single benthic fluxes. Short-term environmental parameters (sinking flux of particulate organic carbon above the bottom, sediment surface Chl a were most important for explaining oxygen, ammonium and nitrate fluxes. Long-term parameters (porosity, surface manganese and iron concentration, bottom water oxygen concentrations together with δ13Corg signature explained most of the spatial variation in phosphate, nitrate and nitrite fluxes. Variation in pigments at the sediment surface was most important to explain variation in fluxes of silicic acid. In a model including all fluxes synchronously, the overall spatial distribution could be best explained (57% by the combination of sediment Chl a, phaeopigments, δ13Corg, surficial manganese and bottom water oxygen concentration. We conclude that it is necessary to consider long-term environmental variability along with

  1. A reversible bipolar WORM device based on AlOxNy thin film with Al nano phase embedded

    Science.gov (United States)

    Zhu, W.; Li, J.; Zhang, L.; Hu, X. C.

    2017-03-01

    An Al-rich AlOxNy thin film based reversible Write-Once-Read-Many-Times (WORM) memory device with MIS structure could transit from high resistance state (HRS, ∼1011 Ω) to low resistance state (LRS, ∼105 Ω) by sweeping voltage up to ∼20 V. The first switching could be recorded as writing process for WORM device which may relate to conductive path are formed through the thin film. The conductive path should be formed by both Al nano phase and oxygen vacancies. Among of them, Al nano phases are not easy to move, but oxygen vacancies could migrate under high E-field or at high temperature environment. Such conductive path is not sensitive to charging effect after it formed, but it could be broken by heating effect, which may relate to the migration of excess Al ions and oxygen vacancies at high temperature. After baking LRS (ON state) WORM device at 200 °C for 2 min, the conductivity will decrease to HRS which indicates conductive path is broken and device back to HRS (OFF state) again. This phenomenon could be recorded as recovery process. Both writing and recovery process related to migration of oxygen vacancies and could be repeated over 10 times in this study. It also indicates that there is no permanent breakdown occurred in MIS structured WORM device operation. We suggest that this conductive path only can be dissolved by a temperature sensitive electro-chemical action. This WORM device could maintain at LRS over 105 s with on-off ratio over 4 orders.

  2. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  3. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  4. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay (NODC Accession 0070784)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Coastal Services Center purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic habitat...

  5. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  6. CRED Integrated Benthic Habitat Map for Tutuila Island, American Samoa Year 2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is an integrated benthic habitat map system which consists of a number of separate map layers including multibeam bathymetry, digital NOAA nautical charts,...

  7. Effects of hydraulic shellfish harvesting on benthic communities and sediment chemistry 2009-2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The effects of hydraulic shellfish harvesting on the ecology of biological communities and chemistry of benthic sediments were investigated through a series of...

  8. Ecological periodic tables for benthic macrofaunal usage of estuarine habitats in the US Pacific Northwest

    Science.gov (United States)

    Estuary-wide benthic macrofauna─habitat associations were determined for 9 habitats (intertidal eelgrass [Zostera marina], dwarf eelgrass [Zostera japonica], oyster [Crassostrea gigas], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis], shell, sand, mud,...

  9. Baseline assessment of fish and benthic communities of the Flower Garden Banks (NODC Accession 0118358)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The proposed work develop baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys will employ...

  10. St. John, USVI Benthic Composition Assessment and Monitoring Data (2002 - Present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below.The intent of this work is five fold: 1) To spatially characterize...

  11. St. Croix, USVI Benthic Composition Assessment and Monitoring Data (2002 - Present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below. The intent of this work is five fold: 1) To spatially characterize...

  12. Baseline assessment of benthic communities of the Flower Garden Banks (2010 - present): 2011

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The proposed work develop baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys will employ...

  13. Integrated ecosystem assessment of Vieques, Puerto Rico Benthic Composition Assessment and Monitoring Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below.The National Oceanic and Atmospheric Administration's (NOAA)...

  14. Baseline assessment of the benthic communities of the Flower Garden Banks

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The work developed baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys employed diving,...

  15. Benthic foraminifera as proxy for oxygen-depleted conditions off the central west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Nigam, R.; Mazumder, A.; Henriques, P; Saraswat, R.

    species belong to 18 rectilinear bi- and tri-serial benthic foraminifer genera. The RBF abundance remains consistently high (>40%) between 90 m to approx. 1200 m water depth. The intermediate depth zone of increased abundance of RBFs coincides...

  16. A preliminary study of an eastern Mediterranean coastal ecosystem: Summer Resorts and Benthic ecosystems

    Directory of Open Access Journals (Sweden)

    S. REIZOPOULOU

    2012-12-01

    Full Text Available The present study investigates whether coastal benthic communities are affected by tourist activities along the coast, which persist for a limited time period. The analysis of benthic macrofauna is based on the ecological parameters (quantitative analyses as well as on the ecological identity of the species (qualitative analyses. Microbial contamination and some population statistics are correlated with ecological parameters. The disturbance of benthic communities in the vicinity of summer resorts is summarized by a reduction in species number and dominance of opportunistic species characteristic of disturbed and polluted environments. It is found that community diversity and evenness of distribution decrease with the deterioration of water quality, expressed as grade of microbial contamination, which implies that benthic community is also a significant element in assessing the quality of coastal waters. The above parameters were statistically negatively correlated with the number of tourists.

  17. Coastal Bend Texas Benthic Habitat Mapping Upper Laguna Madre Bay 2004 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  18. Coastal Bend Texas Benthic Habitat Mapping Upper Laguna Madre Bay 2004 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  19. Coastal Bend Texas Benthic Habitat Mapping Upper Laguna Madre Bay 2004 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  20. Coastal Bend Texas Benthic Habitat Mapping Upper Laguna Madre Bay (NODC Accession 0070784)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Coastal Services Center purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic habitat...