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Sample records for barley grain based

  1. In situ identification and quantification of starch-hydrolyzing bacteria attached to barley and corn grain in the rumen of cows fed barley-based diets.

    Science.gov (United States)

    Xia, Yun; Kong, Yunhong; Seviour, Robert; Yang, Hee-Eun; Forster, Robert; Vasanthan, Thavaratnam; McAllister, Tim

    2015-08-01

    Cereal grains rich in starch are widely used to meet the energy demands of high-producing beef and dairy cattle. Bacteria are important players in starch digestion in the rumen, and thus play an important role in the hydrolysis and fermentation of cereal grains. However, our understanding of the composition of the rumen starch-hydrolyzing bacteria (SHB) is limited. In this study, BODIPY FL DQ starch staining combined with fluorescence in situ hybridization (FISH) and quantitative FISH were applied to label, identify and quantify SHB possessing active cell-surface-associated (CSA) α-amylase activity in the rumen of heifers fed barley-based diets. When individual cells of SHB with active CSA α-amylase activity were enumerated, they constituted 19-23% of the total bacterial cells attached to particles of four different cultivars of barley grain and corn. Quantitative FISH revealed that up to 70-80% of these SHB were members of Ruminococcaceae in the phylum Firmicutes but were not Streptococcus bovis, Ruminobacter amylophilus, Succinomonas amylolytica, Bifidobacterium spp. or Butyrivibrio fibrisolvens, all of whose amylolytic activities have been demonstrated previously in vitro. The proportion of barley grain in the diet had a large impact on the percentage abundance of total SHB and Ruminococcaceae SHB in these animals. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  2. A roadmap for zinc trafficking in the developing barley grain based on laser capture microdissection and gene expression profiling

    DEFF Research Database (Denmark)

    Tauris, Birgitte; Borg, Søren; Gregersen, Per L

    2009-01-01

    Nutrients destined for the developing cereal grain encounter several restricting barriers on their path towards their final storage sites in the grain. In order to identify transporters and chelating agents that may be involved in transport and deposition of zinc in the barley grain, expression...

  3. Substituting maize grain with barley grain in concentrates fed to ...

    African Journals Online (AJOL)

    The aim of the study was to determine the effect of substituting maize grain with barley grain in the diet of lactating Jersey cows grazing kikuyu-ryegrass pasture. Sixty Jersey cows were blocked in terms of number of days in milk, lactation number, milk yield and live weight and randomly assigned to one of five treatments (n ...

  4. Inhibition of barley grain germination by light

    NARCIS (Netherlands)

    Roth-Bejerano, N.; Meulen, R.M. van der; Wang, M.

    1996-01-01

    Intact grains of barley (Hordeum distichum cv. Triumph) germinated rapidly in the dark or when exposed to brief daily light breaks in the temperature range 15-25°C, although germination proceeded less rapidly at low temperatures. Prolonged illumination (16 h/day) or continuous light inhibited

  5. Barley grain for ruminants: A global treasure or tragedy

    OpenAIRE

    Nikkhah Akbar

    2012-01-01

    Abstract Barley grain (Hordeum vulgare L.) is characterized by a thick fibrous coat, a high level of ß-glucans and simply-arranged starch granules. World production of barley is about 30 % of that of corn. In comparison with corn, barley has more protein, methionine, lysine, cysteine and tryptophan. For ruminants, barley is the third most readily degradable cereal behind oats and wheat. Due to its more rapid starch fermentation rate compared with corn, barley also provides a more synchronous ...

  6. Fermentation characteristics of corn-, triticale-, and wheat-based dried distillers' grains with solubles in barley-based diets determined using continuous and batch culture systems.

    Science.gov (United States)

    Au, Findy; McKeown, Lisa E; McAllister, Tim A; Chaves, Alexandre V

    2010-09-01

    Dried distillers' grains with solubles (DDGS) are becoming increasingly available and popular as an alternative livestock feed. This study used continuous and batch culture techniques to compare the in vitro fermentation characteristics of diets containing corn-, triticale- or wheat-based DDGS at 200 g kg(-1) diet dry matter (DM) against a barley grain-based control diet. In continuous fermentation of wheat DDGS diet, total volatile fatty acid (VFA) concentration was decreased by 15.7% across sampling times and NH(3) concentration was quadrupled compared with control, whereas fermentations of corn- and triticale-DDGS diets were similar to the barley-based control. In batch cultures, corn DDGS differed from control only in increased culture pH. Compared with control diet, triticale DDGS yielded lower total gas production (140.94 versus 148.78 mL g(-1) DM) and in vitro DM digestibility (IVDMD; 0.509 versus 0.535). Wheat DDGS diet yielded decreased total gas production (123.49 mL g(-1) DM) and IVDMD (0.468), as well as total VFA production (105.84 versus 134.20 mmol L(-1)) and substantially increased ammonia concentration (151.61 versus 58.34 mg L(-1)) and acetate:propionate ratio (2.94 versus 1.11). Corn- and triticale- DDGS diets exhibited fermentation characteristics similar to the barley based control diet, consistent with in vivo findings that these diets yielded no adverse effects on production. In vitro ruminal fermentation of wheat DDGS diet differed significantly from control in several aspects including 2.6 to 6X higher ammonia concentrations. Copyright 2010 Society of Chemical Industry.

  7. Lysine metabolism in antisense C-hordein barley grains

    DEFF Research Database (Denmark)

    Schmidt, Daiana; Rizzi, Vanessa; Gaziola, Salete A

    2015-01-01

    The grain proteins of barley are deficient in lysine and threonine due to their low concentrations in the major storage protein class, the hordeins, especially in the C-hordein subgroup. Previously produced antisense C-hordein transgenic barley lines have an improved amino acid composition, with ...

  8. Barley grain for ruminants: A global treasure or tragedy.

    Science.gov (United States)

    Nikkhah, Akbar

    2012-07-09

    Barley grain (Hordeum vulgare L.) is characterized by a thick fibrous coat, a high level of ß-glucans and simply-arranged starch granules. World production of barley is about 30 % of that of corn. In comparison with corn, barley has more protein, methionine, lysine, cysteine and tryptophan. For ruminants, barley is the third most readily degradable cereal behind oats and wheat. Due to its more rapid starch fermentation rate compared with corn, barley also provides a more synchronous release of energy and nitrogen, thereby improving microbial nutrient assimilation. As a result, feeding barley can reduce the need for feeding protected protein sources. However, this benefit is only realized if rumen acidity is maintained within an optimal range (e.g., > 5.8 to 6.0); below this range, microbial maintenance requirements and wastage increase. With a low pH, microbial endotoxines cause pro-inflammatory responses that can weaken immunity and shorten animal longevity. Thus, mismanagement in barley processing and feeding may make a tragedy from this treasure or pearl of cereal grains. Steam-rolling of barley may improve feed efficiency and post-rumen starch digestion. However, it is doubtful if such processing can improve milk production and feed intake. Due to the need to process barley less extensively than other cereals (as long as the pericarp is broken), consistent and global standards for feeding and processing barley could be feasibly established. In high-starch diets, barley feeding reduces the need for capacious small intestinal starch assimilation, subsequently reducing hindgut starch use and fecal nutrient loss. With its nutritional exclusivities underlined, barley use will be a factual art that can either matchlessly profit or harm rumen microbes, cattle production, farm economics and the environment.

  9. Barley grain for ruminants: A global treasure or tragedy

    Directory of Open Access Journals (Sweden)

    Nikkhah Akbar

    2012-07-01

    Full Text Available Abstract Barley grain (Hordeum vulgare L. is characterized by a thick fibrous coat, a high level of ß-glucans and simply-arranged starch granules. World production of barley is about 30 % of that of corn. In comparison with corn, barley has more protein, methionine, lysine, cysteine and tryptophan. For ruminants, barley is the third most readily degradable cereal behind oats and wheat. Due to its more rapid starch fermentation rate compared with corn, barley also provides a more synchronous release of energy and nitrogen, thereby improving microbial nutrient assimilation. As a result, feeding barley can reduce the need for feeding protected protein sources. However, this benefit is only realized if rumen acidity is maintained within an optimal range (e.g., > 5.8 to 6.0; below this range, microbial maintenance requirements and wastage increase. With a low pH, microbial endotoxines cause pro-inflammatory responses that can weaken immunity and shorten animal longevity. Thus, mismanagement in barley processing and feeding may make a tragedy from this treasure or pearl of cereal grains. Steam-rolling of barley may improve feed efficiency and post-rumen starch digestion. However, it is doubtful if such processing can improve milk production and feed intake. Due to the need to process barley less extensively than other cereals (as long as the pericarp is broken, consistent and global standards for feeding and processing barley could be feasibly established. In high-starch diets, barley feeding reduces the need for capacious small intestinal starch assimilation, subsequently reducing hindgut starch use and fecal nutrient loss. With its nutritional exclusivities underlined, barley use will be a factual art that can either matchlessly profit or harm rumen microbes, cattle production, farm economics and the environment.

  10. Expression of lipoxygenase isoenzymes in developing barley grains

    NARCIS (Netherlands)

    Schmitt, N.F.; Mechelen, J.R. van

    1997-01-01

    Expression of lipoxygenase was studied in whole developing barley grains from 5 days after flowering (DAF) to full maturity. Lipoxygenase showed two distinct peaks of activity. The first peak of activity occurred in the early stages of grain development from 5 until 20 DAF, whereas the second peak

  11. Brewing with 100 % unmalted grains: barley, wheat, oat and rye

    DEFF Research Database (Denmark)

    Zhuang, Shiwen; Shetty, Radhakrishna; Hansen, Mikkel

    2017-01-01

    Whilst beers have been produced using various levels of unmalted grains as adjuncts along with malt, brewing with 100 % unmalted grains in combination with added mashing enzymes remains mostly unknown. The aim of this study was to investigate the brewing potential of 100 % unmalted barley, wheat,...

  12. A Genome Wide Association Study of arabinoxylan content in 2-row spring barley grain.

    Directory of Open Access Journals (Sweden)

    Ali Saleh Hassan

    Full Text Available In barley endosperm arabinoxylan (AX is the second most abundant cell wall polysaccharide and in wheat it is the most abundant polysaccharide in the starchy endosperm walls of the grain. AX is one of the main contributors to grain dietary fibre content providing several health benefits including cholesterol and glucose lowering effects, and antioxidant activities. Due to its complex structural features, AX might also affect the downstream applications of barley grain in malting and brewing. Using a high pressure liquid chromatography (HPLC method we quantified AX amounts in mature grain in 128 spring 2-row barley accessions. Amounts ranged from ~ 5.2 μg/g to ~ 9 μg/g. We used this data for a Genome Wide Association Study (GWAS that revealed three significant quantitative trait loci (QTL associated with grain AX levels which passed a false discovery threshold (FDR and are located on two of the seven barley chromosomes. Regions underlying the QTLs were scanned for genes likely to be involved in AX biosynthesis or turnover, and strong candidates, including glycosyltransferases from the GT43 and GT61 families and glycoside hydrolases from the GH10 family, were identified. Phylogenetic trees of selected gene families were built based on protein translations and were used to examine the relationship of the barley candidate genes to those in other species. Our data reaffirms the roles of existing genes thought to contribute to AX content, and identifies novel QTL (and candidate genes associated with them potentially influencing the AX content of barley grain. One potential outcome of this work is the deployment of highly associated single nucleotide polymorphisms markers in breeding programs to guide the modification of AX abundance in barley grain.

  13. Effects of process parameters on the properties of barley containing snacks enriched with brewer's spent grain.

    Science.gov (United States)

    Kirjoranta, Satu; Tenkanen, Maija; Jouppila, Kirsi

    2016-01-01

    Brewer's spent grain (BSG), a by-product of malting of barley in the production of malt extract, was used as an ingredient in extruded barley-based snacks in order to improve the nutritional value of the snacks and widen the applications of this by-product in food sector. The effects of the extrusion parameters on the selected properties of the snacks were studied. Snacks with different ingredients including whole grain barley flour, BSG, whey protein isolate (WPI), barley starch and waxy corn starch were produced in 5 separate trials using a co-rotating twin-screw extruder. Extrusion parameters were water content of the mass (17-23 %), screw speed (200-500 rpm) and temperature of the last section and die (110-150 °C). Expansion, hardness and water content of the snacks were determined. Snacks containing barley flour and BSG (10 % of solids) had small expansion and high hardness. Addition of WPI (20 % of solids) increased expansion only slightly. Snacks with high expansion and small hardness were obtained when part of the barley flour was replaced with starch (barley or waxy corn). Yet, the highest expansion and the smallest hardness were achieved when barley flour was used with barley starch and WPI without BSG. Furthermore, expansion increased by increasing screw speed and decreasing water content of the mass in most of the trials. This study showed that BSG is a suitable material for extruded snacks rich in dietary fiber. Physical properties of the snacks could be improved by using barley or waxy corn starch and WPI.

  14. Water uptake in barley grain: Physiology; genetics and industrial applications.

    Science.gov (United States)

    Cu, Suong; Collins, Helen M; Betts, Natalie S; March, Timothy J; Janusz, Agnieszka; Stewart, Doug C; Skadhauge, Birgitte; Eglinton, Jason; Kyriacou, Bianca; Little, Alan; Burton, Rachel A; Fincher, Geoffrey B

    2016-01-01

    Water uptake by mature barley grains initiates germination and is the first stage in the malting process. Here we have investigated the effects of starchy endosperm cell wall thickness on water uptake, together with the effects of varying amounts of the wall polysaccharide, (1,3;1,4)-β-glucan. In the latter case, we examined mutant barley lines from a mutant library and transgenic barley lines in which the (1,3;1,4)-β-glucan synthase gene, HvCslF6, was down-regulated by RNA interference. Neither cell wall thickness nor the levels of grain (1,3;1,4)-β-glucan were significantly correlated with water uptake but are likely to influence modification during malting. However, when a barley mapping population was phenotyped for rate of water uptake into grain, quantitative trait locus (QTL) analysis identified specific regions of chromosomes 4H, 5H and 7H that accounted for approximately 17%, 18% and 11%, respectively, of the phenotypic variation. These data indicate that variation in water uptake rates by elite malting cultivars of barley is genetically controlled and a number of candidate genes that might control the trait were identified under the QTL. The genomics data raise the possibility that the genetic variation in water uptake rates might be exploited by breeders for the benefit of the malting and brewing industries. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  15. Cadmium translocation and accumulation in developing barley grains

    DEFF Research Database (Denmark)

    Chen, Fei; Wu, Feibo; Dong, Jing

    2007-01-01

     Soil cadmium (Cd) contamination has posed a serious problem for safe food production and become a potential agricultural and environmental hazard worldwide. In order to study the transport of Cd into the developing grains, detached ears of two-rowed barley cv. ZAU 3 were cultured in Cd stressed ...

  16. Replacement of barley grains and dehydrated alfalfa by Sulla Hay ...

    African Journals Online (AJOL)

    Replacement of barley grains and dehydrated alfalfa by Sulla Hay (Hedysarum flexuosum) and common reed leaves (Phragmites australis) in fattening rabbits diet. S.A. Kadi, A. Mouhous, F. Djellal, ... was valuable for fattening rabbit. Keywords: Rabbit, Growth performances, Phragmites australis, Hedysarum flexuosum.

  17. Revisit to Ethiopian traditional barley-based food

    Directory of Open Access Journals (Sweden)

    Jemal Mohammed

    2016-06-01

    Full Text Available Barley is the number one food crop in the highland parts of North Eastern Ethiopia produced by subsistence farmers grown as landraces. Barley producers in Ethiopia have given it the name gebs ye ehil nigus, which means barley is the king of crops, due to its suitability for preparing many of the known Ethiopians traditional dishes. Various barley foods and drinks play an important role in the socioeconomic and cultural life of Ethiopians, but detailed descriptions related to their preparation and their socioeconomic and cultural roles are not well-recorded and documented like most of the Ethiopian cultural foods. Foods such as ingera, kita, dabo, kolo, genfo, beso, chuko, shamet, tihlo, kinch, and shorba are the most commonly known traditional Ethiopian barley-based foods. These products are prepared from either roasted whole grain, raw and roasted-milled grain, or cracked grain as main, side, ceremonial, and recuperating dishes. The various barley-based traditional foods have perceived qualities and health benefits by the consumers. For example, genfo is served to breast-feeding mothers with the belief that it enhances breast milk production and serves as a good substitute for breast milk. Beso is claimed to be a remedy for gastritis, while genfo and kinche are used to heal broken bones and fractures. Considering the Western consumers' trend on functional foods and health benefits of barley, Ethiopian traditional barley-based foods are worth studying as functional foods, which can be appealing to Western consumers.

  18. Barley grain enrichement with essential elements by agronomic biofortification

    Directory of Open Access Journals (Sweden)

    Dragičević Vesna D.

    2016-01-01

    Full Text Available Barley grain is rich in mineral nutrients, but their bioavailability to humans depends on antinutrients that restrain bioavailability and promoters that promote bioavailability. The aim of this study was to examine composition of barley grain, including phytate and phenolics as antinutrients, carotenoids and glutathione as promoters and mineral elements, such as Ca, Mg, Fe, Si, Zn and Mn influenced by various non-standard foliar fertilizers (Zircon, Chitosan, Siliplant, Propikonazole, including some hormonal growth-stimulators (Epin Extra, Benzyladenine, as potential biofortification measure. Chitosan increased glutathione concentration in grain. Unfavorable meteorological conditions were partly mitigated by application of Benzyladenine and Siliplant, reflected through increased potential bioavailability of P, Mg, Ca and Fe. [Projekat Ministarstva nauke Republike Srbije, br. TR-31037

  19. Proteomic profiling of barley spent grains guides enzymatic solubilization of the remaining proteins.

    Science.gov (United States)

    Bi, Xuezhi; Ye, Lijuan; Lau, Ally; Kok, Yee Jiun; Zheng, Lu; Ng, Daniel; Tan, Kelly; Ow, Dave; Ananta, Edwin; Vafiadi, Christina; Muller, Jeroen

    2018-03-17

    Within the brewing industry, malted barley is being increasingly replaced by raw barley supplemented with exogenous enzymes to lessen reliance on the time-consuming, high water and energy cost of malting. Regardless of the initial grain of choice, malted or raw, the resultant bulk spent grains are rich in proteins (up to 25% dry weight). Efficient enzymatic solubilization of these proteins requires knowledge of the protein composition within the spent grains. Therefore, a comprehensive proteomic profiling was performed on spent grains derived from (i) malted barley (spent grain A, SGA) and (ii) enzymatically treated raw barley (spent grain B, SGB); data are available via ProteomeXchange with identifier PXD008090. Results from complementary shotgun proteomics and 2D gel electrophoresis showed that the most abundant proteins in both spent grains were storage proteins (hordeins and embryo globulins); these were present at an average of two fold higher in spent grain B. Quantities of other major proteins were generally consistent in both spent grains A and B. Subsequent in silico protein sequence analysis of the predominant proteins facilitated knowledge-based protease selection to enhance spent grain solubilization. Among tested proteases, Alcalase 2.4 L digestion resulted in the highest remaining protein solubilization with 9.2 and 11.7% net dry weight loss in SGA and SGB respectively within 2 h. Thus, Alcalase alone can significantly reduce spent grain side stream, which makes it a possible solution to increase the value of this low-value side stream from the brewing and malt extract beverage manufacturing industry.

  20. Comparatiave analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination

    NARCIS (Netherlands)

    Witzel, K.; Weidner, A.; Surabhi, G.K.; Varshney, R.K.; Kunze, G.; Buck-Sorlin, G.H.; Börner, A.; Mock, H.P.

    2010-01-01

    In the present paper, we based a search for candidates underlying different levels of salinity tolerance during germination in the Oregon Wolfe Barley mapping population (DOM × REC) by proteomic profiling of the mature grain of lines showing differing levels of salinity tolerance. By contrasting the

  1. Linkage mapping of putative regulator genes of barley grain development characterized by expression profiling

    Directory of Open Access Journals (Sweden)

    Wobus Ulrich

    2009-01-01

    Full Text Available Abstract Background Barley (Hordeum vulgare L. seed development is a highly regulated process with fine-tuned interaction of various tissues controlling distinct physiological events during prestorage, storage and dessication phase. As potential regulators involved within this process we studied 172 transcription factors and 204 kinases for their expression behaviour and anchored a subset of them to the barley linkage map to promote marker-assisted studies on barley grains. Results By a hierachical clustering of the expression profiles of 376 potential regulatory genes expressed in 37 different tissues, we found 50 regulators preferentially expressed in one of the three grain tissue fractions pericarp, endosperm and embryo during seed development. In addition, 27 regulators found to be expressed during both seed development and germination and 32 additional regulators are characteristically expressed in multiple tissues undergoing cell differentiation events during barley plant ontogeny. Another 96 regulators were, beside in the developing seed, ubiquitously expressed among all tissues of germinating seedlings as well as in reproductive tissues. SNP-marker development for those regulators resulted in anchoring 61 markers on the genetic linkage map of barley and the chromosomal assignment of another 12 loci by using wheat-barley addition lines. The SNP frequency ranged from 0.5 to 1.0 SNP/kb in the parents of the various mapping populations and was 2.3 SNP/kb over all eight lines tested. Exploration of macrosynteny to rice revealed that the chromosomal orders of the mapped putative regulatory factors were predominantly conserved during evolution. Conclusion We identified expression patterns of major transcription factors and signaling related genes expressed during barley ontogeny and further assigned possible functions based on likely orthologs functionally well characterized in model plant species. The combined linkage map and reference

  2. Cyclitols in maturing grains of wheat, triticale and barley

    Directory of Open Access Journals (Sweden)

    Lesław B. Lahuta

    2011-01-01

    Full Text Available In the present study, the feeding of stem-flag leaf-ear explants of wheat, triticale and barley with d-chiro-inositol and d-pinitol was used for modification of the composition of soluble carbohydrates in grains without genetic transformation of plants. Maturing grains indicated ability to uptake exogenously applied cyclitols, not occurring naturally in cereal plants, and synthesized their a-d-galactosides. The pattern of changes in soluble carbohydrates during grain maturation and germination was not disturbed by the uptake and accumulation of cyclitols. Both, d-chiro-inositol and d-pinitol as well as their a-d-galactosides can be an additional pool of soluble carbohydrates accumulated by maturing grains, without decreasing seeds viability. This is the first report indicating the possibility of introduction of cyclitols with potentially human health benefits properties into cereal grains.

  3. A proteomics-based study of endogenous and microbial xylanases and xylanase inhibitors associated with barley grains used for liquid feed

    DEFF Research Database (Denmark)

    Sultan, Abida

    The mature barley grain contains a complement of enzymes that are synthesized during seed development for degradation of seed storage reserves during germination. These enzyme activities (first wave enzymes) are considered important for maximizing nutrient digestibility in food and feed. Several...... strategies, such as liquid feed and supplementation of amino acids and microbial exogenous enzymes, are applied to improve protein absorption. A diverse commensal microbial community populates the cereal grains. The colonizing microflora constitute an integrated part of the seeds and interact....../influence the plant and/or competitors via secretion of an array of enzymes and compounds/metabolites. The occurrence of these enzyme activities both of plant and fungal origin present a great potential for improvement of grain nutritional components for feed applications. Knowledge is lacking in the variation...

  4. Effect of Supplemental Dietary Fat and Processed Barley Grain on Performance of Lactating Dairy Cow

    Directory of Open Access Journals (Sweden)

    Y.A Alijoo

    2012-02-01

    Full Text Available The effect of barley grain processing and source of supplemental fat on performance of lactating dairy cows were studied in a replicated 4 × 4 Latin square design with 21-d periods and a 2 × 2 factorial arrangement. Eight Holstein cows with mean body weight (BW of 572 ± 71 kg and 45 ± 10 days in milk were allocated to 4 dietary treatments including 1 ground barley with cottonseed 2 pelleted barley with cottonseed 3 ground barley with canola seed 4 pelleted barley with canola seed. The nitrogen intake and fecal N were higher in cows fed ground barley in comparison with those fed pelleted barley. Source of supplemental fat or barley processing had no effect on milk fat and milk protein contents. Milk SNF yield was higher in cows fed canola as supplemental fat source and ground barley (P < 0.05. Milk yield was affected by method of barley grain processing and was 0.64 to 1.9 kg/d higher in cows fed ground barley compared with those fed pelleted barley (P = 0.04. Plasma concentrations of glucose, NEFA, BHBA, cholesterol, triglycerides and blood urea nitrogen were similar in all treatments. Dry matter intake was affected by barley grain processing. The cows fed ground barley consuming 1.15 to 2.18 kg/d more DM compared with those fed pelleted barley (P = 0.04.Total tract digestibilities of DM, crude fat, ADF, NDF and OM were not affected by the barley grain processing as well as source of oilseed. The results indicated that interactions between barley grain processing and source of supplemental dietary fat can improve the performance of lactating dairy cows, However, more detailed studies are required

  5. The Role of alpha-Glucosidase in Germinating Barley Grains

    DEFF Research Database (Denmark)

    Stanley, Duncan; Rejzek, Martin; Næsted, Henrik

    2011-01-01

    The importance of alpha-glucosidase in the endosperm starch metabolism of barley (Hordeum vulgare) seedlings is poorly understood. The enzyme converts maltose to glucose (Glc), but in vitro studies indicate that it can also attack starch granules. To discover its role in vivo, we took complementary...... chemical-genetic and reverse-genetic approaches. We identified iminosugar inhibitors of a recombinant form of an alpha-glucosidase previously discovered in barley endosperm (ALPHA-GLUCOSIDASE97 [HvAGL97]), and applied four of them to germinating grains. All four decreased the Glc-to-maltose ratio...... in the endosperm 10 d after imbibition, implying inhibition of maltase activity. Three of the four inhibitors also reduced starch degradation and seedling growth, but the fourth did not affect these parameters. Inhibition of starch degradation was apparently not due to inhibition of amylases. Inhibition...

  6. Relationship of carbohydrates and lignin molecular structure spectral profiles to nutrient profile in newly developed oats cultivars and barley grain

    Science.gov (United States)

    Prates, Luciana Louzada; Refat, Basim; Lei, Yaogeng; Louzada-Prates, Mariana; Yu, Peiqiang

    2018-01-01

    The objectives of this study were to quantify the chemical profile and the magnitude of differences in the oat and barley grain varieties developed by Crop Development Centre (CDC) in terms of Cornell Net Carbohydrate Protein System (CNCPS) carbohydrate sub-fractions: CA4 (sugars), CB1 (starch), CB2 (soluble fibre), CB3 (available neutral detergent fibre - NDF), and CC (unavailable carbohydrate); to estimate the energy values; to detect the lignin and carbohydrate (CHO) molecular structure profiles in CDC Nasser and CDC Seabiscuit oat and CDC Meredith barley grains by using Fourier transform infrared attenuated total reflectance (FTIR-ATR); to develop a model to predict nutrient supply based on CHO molecular profile. Results showed that NDF, ADF and CHO were greater (P 0.05) for oat and barley grains as well as non-structural CHO. However, cellulosic compounds peak area and height were greater (P regressions were determined to predict nutrient supply by using lignin and CHO molecular profiles. It was concluded that although there were some differences between oat and barley grains, CDC Nasser and CDC Meredith presented similarities related to chemical and molecular profiles, indicating that CDC Meredith barley could be replaced for CDC Nasser as ruminant feed. The FTIR was able to identify functional groups related to CHO molecular spectral in oat and barley grains and FTIR-ATR results could be used to predict nutrient supply in ruminant livestock systems.

  7. Effects of nitrogen application rate on dry matter redistribution, grain yield, nitrogen use efficiency and photosynthesis in malting barley

    DEFF Research Database (Denmark)

    Cai, J; Jiang, D; Wollenweber, Bernd

    2012-01-01

    The harmonious combination of malting barley yield, quality and nitrogen (N) use-efficiency under nitrogen (N) rates applications was greatly conducive to production in China. The malting barley cultivar Supi 3 was planted during the growing seasons 2005 and 2006 at two contrasting sites in China....... Five nitrogen (N) application rates (0, 75, 150, 225 and 300 kg ha−1) were applied for research of effects of N rates application on grain yield, protein content and N use-efficiency. At both sites and in both years, grain yield increased with increasing N application rates up to 225 kg N ha−1......, and decreased with 300 kg N ha−1. Net photosynthetic rate (P N) and the amount of accumulated dry matter distributed into grains showed the same response to N application as grain yield. Grain protein content increased with increasing N application rates. Moreover, based on further analysis of these results...

  8. High night temperatures during grain number determination reduce wheat and barley grain yield: a field study.

    Science.gov (United States)

    García, Guillermo A; Dreccer, M Fernanda; Miralles, Daniel J; Serrago, Román A

    2015-11-01

    Warm nights are a widespread predicted feature of climate change. This study investigated the impact of high night temperatures during the critical period for grain yield determination in wheat and barley crops under field conditions, assessing the effects on development, growth and partitioning crop-level processes driving grain number per unit area (GN). Experiments combined: (i) two contrasting radiation and temperature environments: late sowing in 2011 and early sowing in 2013, (ii) two well-adapted crops with similar phenology: bread wheat and two-row malting barley and (iii) two temperature regimes: ambient and high night temperatures. The night temperature increase (ca. 3.9 °C in both crops and growing seasons) was achieved using purpose-built heating chambers placed on the crop at 19:000 hours and removed at 7:00 hours every day from the third detectable stem node to 10 days post-flowering. Across growing seasons and crops, the average minimum temperature during the critical period ranged from 11.2 to 17.2 °C. Wheat and barley grain yield were similarly reduced under warm nights (ca. 7% °C(-1) ), due to GN reductions (ca. 6% °C(-1) ) linked to a lower number of spikes per m(2) . An accelerated development under high night temperatures led to a shorter critical period duration, reducing solar radiation capture with negative consequences for biomass production, GN and therefore, grain yield. The information generated could be used as a starting point to design management and/or breeding strategies to improve crop adaptation facing climate change. © 2015 John Wiley & Sons Ltd.

  9. Determinants of barley grain yield in a wide range of Mediterranean environments

    NARCIS (Netherlands)

    Francia, E.; Tondelli, A.; Rizza, F.; Badeck, F.W.; Li Destri Nicosia, O.; Akar, T.; Grando, S.; Al-Yassin, A.; Benkelkacim, A.; Thomas, W.T.B.; Eeuwijk, van F.A.; Romagosa, I.; Stanca, A.M.; Pechionni, N.

    2011-01-01

    Barley grain yield in rainfed Mediterranean regions can be largely influenced by terminal drought events. In this study the ecophysiological performance of the ‘Nure’ (winter) × ‘Tremois’ (spring) barley mapping population (118 Doubled Haploids, DHs) was evaluated in a multi-environment trial of

  10. Malt quality of 4 barley (Hordeum vulgare L.) grain varieties grown ...

    African Journals Online (AJOL)

    user

    2011-01-31

    Jan 31, 2011 ... (TKMWL) was 11 to 13% and is in the range for desirably modified barley grain on malting. The varieties ... Key words: Diastatic tendency, malt extract, FAN, malt barley qualities, net blotch, propiconazole, starch flour pasting. ... phate was applied at the rate of 100 kg/ha (blanket recommen- dation). Weeds ...

  11. Evaluation of grain yield and quality of barley varieties under rainfed ...

    African Journals Online (AJOL)

    This study was carried out in 2002 to 2003 and 2003 to 2004 seasons at the experimental area of Elazıg Agriculture Provincial Directorate in Turkey to investigate the genetic and environmental variation of grain yield and some quality traits of 21 barley cultivars. Grain yield, hectoliter weight (HLW), thousand grain weight ...

  12. Uptake of proline by the scutellum of germinating barley grain

    International Nuclear Information System (INIS)

    Vaeisaenen, E.; Sopanen, T.

    1986-01-01

    Scutella separated from germinating grains of barley (Hordeum vulgare L. cv Himalaya) took up 1 millimolar L-[ 14 C]proline at an initial rate of about 6.5 micromoles gram -1 fresh weight hour -1 (pH 5, 30 0 C). The uptake had a pH optimum at 5. The bulk of the uptake (93%) was via carrier-mediated active transport. All of the 19 L-amino acids tested at 10 millimolar concentration inhibited the mediated uptake of 1 millimolar proline, the inhibitions varying from 18 to 76%. By studying how large a fraction of the mediated uptake was inhibitable by asparagine, alanine, glutamine, and leucine, the mediated uptake was shown to be due to three components. Two of these are most probably attributable to the two nonspecific uptake systems proposed earlier to act in the uptake of glutamine and leucine. The third component was not inhibited by glutamine, asparagine, or alanine, but was inhibited by unlabeled proline and leucine. The uptake by this system was apparently carrier-mediated active transport. D-Proline inhibited this system as strongly as L-proline. Nine of the 16 L-amino tested at 50 millimolar concentrations did not inhibit the uptake of 1 millimolar proline by this system. Valine, leucine, isoleucine, and the basic amino acids were inhibitory, but in spite of this, they did not appear to be taken up by this system. It seems therefore that in addition to two nonspecific amino acid uptake systems the scutella have an uptake system which is specific for proline. It is likely that this proline-specific system accounts for the bulk of proline uptake in a germinating grain

  13. Genotypic and Environmental Influence upon the Nutritional Composition of Barley Grain

    DEFF Research Database (Denmark)

    Torp, J.; Doll, Hans; Haahr, Vagner

    1981-01-01

    The grain yield and contents of the quantitatively predominant nutritional constituents of barley grain were determined in nine adapted spring barley varieties each grown at seven European locations with three or four replications. The largest variation in nutritional composition was due...... to different environmental conditions, but genotypic effects were also present. Interactions between genotype and environment were small. The average protein content at different locations varied from 8.1 to 14.7 per cent of the grain dry matter, and was not simply related to the amount of fertilizer-N applied....... The nutritional composition of the grain was influenced by the grain yield level. The percentage of dietary fiber and protein decreased with increasing grain yield, but some varietal differences which were independent of the grain yield level could be established. The protein quality depended upon the protein...

  14. Effects of dormancy-breaking chemicals on ABA levels in barley grain embryos

    NARCIS (Netherlands)

    Wang, M.; Meulen, R.M. van der; Visser, K.; Schalk, H.P. van; Duijn, B. van; Boer, A.H. de

    1998-01-01

    The endogenous ABA contents of dormant and nondormant barley grains were determined following application of different compounds to break dormancy. The chemicals used for breaking of dormancy in intact dormant grains were weak and strong acids, alcohols,. hydrogen peroxide, cyanide, nitrate,

  15. Differential triazole sensitivity among members of the Fusarium graminearum species complex infecting barley grains in Brazil

    Science.gov (United States)

    Fusarium head blight (FHB) is an important disease of small grains and is caused mainly by members of the Fusarium graminearum species complex (FGSC). Barley growers in Brazil rely on fungicides, especially triazoles, to suppress the disease and limit mycotoxin contamination of grain. Information on...

  16. Modeling moisture absorption kinetics of barley grain using viscoelastic model and neural networks

    Directory of Open Access Journals (Sweden)

    M Kamali

    2015-09-01

    Network (ANN as an important artificial intelligent method comparable to human brain capabilities is applied to train and store data in the form of weighted networks (Dayhoff, 1990. This method has superiority to many ordinary statistical and model making methods. In comparison to linear regression models, ANN does not require placing estimated values around mean values and for this reason it retains actual variations in the data being analyzed. Prediction by using trained ANN enables the researchers to decrease or increase input and output variables.Therefore, it is possible to produce a multivariate model with an output even more than the objectives deemed necessary (Heristev, 1998. The goal of this research was to predict instant moisture content of three barley varieties (Reyhan3, Fajr and MB862 during the soaking process under three temperature levels (10, 20 and 45 ◦C using two conventional ANN methods of multilayer perceptron (MLP and radial basis function (RBF in comparison with viscoelastic mathematical model and reporting the results. Materials and method: Barley varieties were collected from the Isfahan Province Agriculture Organization grain depository and were cleaned and the debris were separated before the experiments. The selected grains were sorted to three groups of small, medium and large grains sizes. To exclude the effect of grain size during moisture absorption, the medium size grains were used. The moisture content of the grains was determined based on the ASAE S352.2 DEC97 (ASAE, 1999 which were %8.23, %8.62 and %8.89 on a dry basis for Reyhan3, Fajr and MB862, respectively with no significant difference at %5 probability level (p>0.05. Experiments were conducted under three temperatures (10, 20 and 45 ◦C in the refrigerator, at room temperature and in the oven, respectively for each variety. In each experiment, 10 medium size grains were selected randomly and weighed with an AND laboratory scale model Gf-400 (made in Japan and placed in foam

  17. Localization to Chromosomes of Structural Genes for the Major Protease Inhibitors of Barley Grains

    DEFF Research Database (Denmark)

    Hejgaard, Jørn; Bjørn, S.E.; Nielsen, Gunnar Gissel

    1984-01-01

    Wheat-barley chromosome addition lines were compared by isoelectric focusing of protein extracts to identify chromosomes carrying loci for the major immunochemically distinct protease inhibitors of barley grains. Structural genes for the following inhibitors were localized: an inhibitor of both...... endogenous α-amylase 2 and subtilisin (ASI) on chromosome 2, two chymotrypsin/subtilisin inhibitors (CI-1 and CI-2) on chromosome 5 (long arm) and the major trypsin inhibitor (TI-1) on chromosome 3....

  18. Feeding barley grain steeped in lactic acid modulates rumen fermentation patterns and increases milk fat content in dairy cows.

    Science.gov (United States)

    Iqbal, S; Zebeli, Q; Mazzolari, A; Bertoni, G; Dunn, S M; Yang, W Z; Ametaj, B N

    2009-12-01

    milk fat content and tended to increase fat:protein ratio in the milk. In conclusion, results demonstrated that treatment of barley grain with LA lowered the risk of subacute rumen acidosis and maintained high milk fat content in late-lactating Holstein cows fed diets based on barley grain.

  19. VARIATION IN GRAIN YIELD, BIOMASS AND GRAIN NUMBER OF BARLEY UNDER DROUGHT

    Directory of Open Access Journals (Sweden)

    Cándido López-Castañeda

    2011-08-01

    Full Text Available Variability in grain yield (GY, aerial biomass (BM and number of grains m-2 (G M-2 in F6 lines and commercial varieties of barley was studied, and the relationship among these characters in full-irrigation (FI, drought (D and rain-fed (RF conditions was determined. Variation in GY, BM and G M-2 among all genotypes, between F6 lines and varieties, and among genotypes of F6 lines and varieties was significant in all the three soil moisture environments. GY, BM and G M-2 in FI were 23, 14 and 21 % greater than the average of the three soil moisture environments; GY, BM and G M-2 in RF were 21, 16 y 24 % lower than this average. F6 lines produced greater GY (380 g m-2, BM (1027 g m-2 and G M-2 (8641 than the commercial varieties (GY=290 g m-2; BM=726 g m-2 y G M-2=7463 in average of the three environments. GY was positive and significantly associated with BM and G M-2; BM and G M-2 were also associated. GY could be improved in either FI, D or RF environments by selecting genotypes with a greater BM and G M-2 or both of them.

  20. The effect of long-term storage on quality of malting barley grain and malt

    Directory of Open Access Journals (Sweden)

    Tomáš KRAJČOVIČ

    2016-12-01

    Full Text Available In the grain samples of five malting barley varieties harvested in 2011, the amount of basic components as well as physiological characteristics of barley were determined. These samples were micromalted and resulting malt was analyzed mainly according to the European Brewery Convention (EBC and the Mitteleuropäische Brautechnische Analysenkommission (MEBAK methodologies. The same samples of malting barley grain and also samples of malt were placed in polyethylene bags, from which the air was exhausted and they were further stored at 4 °C until 2016. In 2016, grain and malt samples were subjected to the same analyses as in 2011. Results were statistically evaluated by t-test of dependent samples. Most of the monitored parameters has remained at the same level as in 2011 or has slightly improved. The exception was statistically very highly significant decrease (P ≤ 0.001 of friability and increase of amount of whole and partly unmodified grains. Under conditions described, long-term storage of malting barley grain has not significantly negatively affected its germination. Long-term storage of malt has had not a significant negative impact on its quality too.

  1. Grain Composition and Functional Ingredients of Barley Varieties Created in Latvia

    Directory of Open Access Journals (Sweden)

    Šterna Vita

    2015-09-01

    Full Text Available Cereals, including barley, have been recognised as functional foods that provide beneficial effect on the health of the consumer and decrease the risk of various diseases. The aim of investigation was to determine the grain composition of barley varieties and perspective breeding lines bred in Latvia and to evaluate its functional ingredients. The results of analysis showed that protein content among varieties ranged from 106.6-146.8 g·kg-1, total dietary fibre 187.4-208.2 g·kg-1, β-glucans 42.8 g-49.4 g·kg-1, and amount of α-tocopherol 6.03-8.93 mg·kg-1. The sum of essential amino acids in barley grain samples was from 32.90 g·kg-1 to 38.71 g·kg-1. All varieties of hulled and hulless barley grain were found to be sources of protein with high biological value. Comparison of barley varieties bred in Latvia suggests that variety ‘Kornelija’ outperforms others in protein, dietary fibre and micronutrient content.

  2. Grain Yield and Economic Benefit of Intercropping Barley and Faba ...

    African Journals Online (AJOL)

    Thus, a study was conducted during 2011 and 2012 years to evaluate the effect of barley (Ba)-faba bean (Fb) intercrop on yield, yield related traits and economic benefit in the highlands of southern Ethiopia. The treatments consisted of planting patterns of one (1Fb), two (2Fb) and three (3Fb) rows of faba bean combined ...

  3. A functional genomics approach to understand the control and regulation of storage protein biosynthesis in barley grain

    DEFF Research Database (Denmark)

    Vincze, É; Hansen, M; Bowra, S

    2008-01-01

    The aim of the study was to obtain an insight into amino acid and storage protein metabolism in the developing barley grain at the molecular level. Our strategy was to analyse the transcriptome of relevant pathways in developing grains of field grown barley using a grain specific microarray assem...... pathways in the barley grain. The study described here could provide a strong complement to existing knowledge assisting further  understanding of seed development and thereby provide a foundation for plant breeding towards storage protein with improved nutritional quality....

  4. Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination.

    Science.gov (United States)

    Witzel, Katja; Weidner, Annette; Surabhi, Giridara-Kumar; Varshney, Rajeev K; Kunze, Gotthard; Buck-Sorlin, Gerhard H; Börner, Andreas; Mock, Hans-Peter

    2010-02-01

    In the present paper, we based a search for candidates underlying different levels of salinity tolerance during germination in the Oregon Wolfe Barley mapping population (DOM x REC) by proteomic profiling of the mature grain of lines showing differing levels of salinity tolerance. By contrasting the parents DOM and REC, displaying divergent stress responses, and two tolerant and two sensitive segregants, six protein spots were identified that showed a differential abundance between the tolerant and the sensitive lines. The tolerant lines expressed a higher level of 6-phosphogluconate dehydrogenase and glucose/ribitol dehydrogenase (Glc/RibDH). Both proteins were heterologously over-expressed in an osmo-sensitive yeast strain and over-expression of Glc/RibDH resulted in an enhanced ability of yeast transformants to grow on salt containing media. A quantitative trait locus (QTL) analysis of the population germinating at different salt concentrations led to the identification of two chromosome regions on 5H and one on 7H associated with salt stress response. A dense barley transcript map was employed to map the genomic region of all identified proteins. Two of these, heat-shock protein 70 and Glc/RibDH, co-localized with the identified QTL on chromosome 5H. The putative functional role of the candidates is discussed.

  5. Zinc blotting assay for detection of zinc binding prolamin in barley (Hordeum vulgare) grain

    DEFF Research Database (Denmark)

    Uddin, Mohammad Nasir; Nielsen, Ane Langkilde-Lauesen; Vincze, Eva

    2014-01-01

    zinc blotting method with a zinc-sensing dye, dithizone. Hordeins were extracted from mature barley grain, separated by SDS-PAGE, blotted on a membrane, renatured, overlaid, and probed with zinc; subsequently, zinc-binding specificity of certain proteins was detected either by autoradiography or color...

  6. The Effect of Feeding Sorghum-Barley Brewer's Spent Grain (Sbbsg ...

    African Journals Online (AJOL)

    The present study shows that SBBSG can effectively be included in laying hen diets up to 20% without any adverse effect on laying performance and egg quality while at the same time reducing egg cholesterol content and being cheaper. Keywords: Sorghum-Barley Brewer's Spent Grain (SBBSG), Layers, Egg Quality ...

  7. Effect of Sorghum -Barley Brewer's Spent Grain as a Feed Ingredient ...

    African Journals Online (AJOL)

    The objective of the study was to determine if the inclusion of Sorghum-Barley Brewer's Spent Grain (SBBSG) in broiler diets will affect growth performance and carcass characteristics. A total of 380 Ross broiler chicks were brooded on a common diet without SBBSG for 28 days after which they were randomly assigned to ...

  8. Production of eicosapentaenoic acid by mortierella spp on barley spent grain

    CSIR Research Space (South Africa)

    Jacobs, A

    2006-02-01

    Full Text Available fermentation, on barley spent grain, a by-product of the brewing industry and a food- grade waste. The substrate has a high protein content and a high fat content (21-25% and 9- 10% respectively on a dry basis). The enzymes used by the fungi to produce ω-3...

  9. Purification, characterization and stability of barley grain peroxidase BP1, a new type of plant peroxidase

    DEFF Research Database (Denmark)

    Rasmussen, Christine B; Henriksen, Anette; Abelskov, A. Katrine

    1997-01-01

    The major peroxidase of barley grain (BP 1) has enzymatic and spectroscopic properties that are very differeant from those of other known plant peroxidases (EC 1.11.1.7) and can therefore contribute to the understanding of the many physiological functions ascribed to these enzymes. To study...

  10. Primary structure of a lipoxygenase from barley grain as deduced from its cDNA sequence

    NARCIS (Netherlands)

    Mechelen, J.R. van; Smits, M.; Douma, A.C.; Rouster, J.; Cameron-Mills, V.; Heidekamp, F.; Valk, B.E.

    1995-01-01

    A full length cDNA sequence for a barley grain lipoxygenase was obtained. It includes a 5' untranslated region of 69 nucleotides, an open reading frame of 2586 nucleotides encoding a protein of 862 amino acid residues and a 3' untranslated region of 142 nucleotides. The molecular mass of the encoded

  11. The Barley Grain Thioredoxin System – an Update

    Directory of Open Access Journals (Sweden)

    Per eHägglund

    2013-05-01

    Full Text Available Thioredoxin reduces disulfide bonds and play numerous important functions in plants. In cereal seeds, cytosolic h-type thioredoxin facilitates the release of energy reserves during the germination process and is recycled by NADPH-dependent thioredoxin reductase. This review presents a summary of the research conducted during the last ten years to elucidate the structure and function of the barley seed thioredoxin system at the molecular level combined with proteomic approaches to identify target proteins.

  12. Differences in grain ultrastructure, phytochemical and proteomic profiles between the two contrasting grain Cd-accumulation barley genotypes.

    Directory of Open Access Journals (Sweden)

    Hongyan Sun

    Full Text Available To reveal grain physio-chemical and proteomic differences between two barley genotypes, Zhenong8 and W6nk2 of high- and low-grain-Cd-accumulation, grain profiles of ultrastructure, amino acid and proteins were compared. Results showed that W6nk2 possesses significantly lower protein content, with hordein depicting the greatest genotypic difference, compared with Zhenong8, and lower amino acid contents with especially lower proportion of Glu, Tyr, Phe and Pro. Both scanning and transmission electron microscopy observation declared that the size of A-type starch molecule in W6nk2 was considerably larger than that of Zhenong8. Grains of Zhenong8 exhibited more protein-rich deposits around starch granules, with some A-type granules having surface pits. Seventeen proteins were identified in grains, using 2-DE coupled with mass spectrometry, with higher expression in Zhenong8 than that in W6nk2; including z-type serpin, serpin-Z7 and alpha-amylase/trypsin inhibitor CM, carbohydrate metabolism, protein synthesis and signal transduction related proteins. Twelve proteins were less expressed in Zhenong8 than that in W6nk2; including barley trypsin inhibitor chloroform/methanol-soluble protein (BTI-CMe2.1, BTI-CMe2.2, trypsin inhibitor, dehydroascorbate reductase (DHAR, pericentrin, dynein heavy chain and some antiviral related proteins. The data extend our understanding of mechanisms underlying Cd accumulation/tolerance and provides possible utilization of elite genetic resources in developing low-grain-Cd barley cultivars.

  13. Synthesis of Salt Soluble Proteins in Barley. Pulse-Labeling Study of Grain Filling in Liquid-Cultured Detached Spikes

    DEFF Research Database (Denmark)

    Giese, Nanna Henriette; Hejgaard, Jørn

    1984-01-01

    The accumulation of salt-soluble proteins in the endosperm of developing barley (Hordeum vulgare L.) grains was examined. Detached spikes of barley were cultured at different levels of nitrogen nutrition and pulse-labeled with [14C] sucrose at specific times after anthesis. Proteins were extracte...

  14. Association mapping of grain hardness, polyphenol oxidase, total phenolics, amylose content, and ß-glucan in US barley breeding germplasm

    Science.gov (United States)

    A renewed interest in breeding barley specifically for food end-uses is being driven by increased consumer interest in healthier foods. We conducted association mapping on physicochemical properties of barley that play a role in food quality and processing including, grain hardness, polyphenol oxid...

  15. Structural Equation Model as a Tool to Assess the Relationship Between Grain Yield Per Plant and Yield Components in Doubled Haploid Spring Barley Lines (Hordeum vulgare L.

    Directory of Open Access Journals (Sweden)

    Mańkowski Dariusz R.

    2016-06-01

    Full Text Available The aim of this study was to describe and characterize the relationships between yielding factors and grain yield per doubled haploid (DH plant of spring barley as well as relation between yield components and duration of each stage of plant development. To describe these relations structure equation modeling was used. The study included plants of doubled haploid spring barley lines (Hordeum vulgare L. derived from two-rowed form of Scarlett cultivar. The SAS® system was used to analyze the model of relationships between grain yield per plant and yield components. Our results indicate that the number of spikes per plant and grain yield per spike had a direct and decisive influence on the grain yield of the investigated DH plants of spring barley. Based on the path model analysis it was found that the most important factor determining grain yield per DH plants of spring barley was the number of spikes per plant and the duration of tillering and shooting stages.

  16. A role for barley CRYPTOCHROME1 in light regulation of grain dormancy and germination.

    Science.gov (United States)

    Barrero, Jose M; Downie, A Bruce; Xu, Qian; Gubler, Frank

    2014-03-01

    It is well known that abscisic acid (ABA) plays a central role in the regulation of seed dormancy and that transcriptional regulation of genes encoding ABA biosynthetic and degradation enzymes is responsible for determining ABA content. However, little is known about the upstream signaling pathways impinging on transcription to ultimately regulate ABA content or how environmental signals (e.g., light and cold) might direct such expression in grains. Our previous studies indicated that light is a key environmental signal inhibiting germination in dormant grains of barley (Hordeum vulgare), wheat (Triticum aestivum), and Brachypodium distachyon and that this effect attenuates as after-ripening progresses further. We found that the blue component of the light spectrum inhibits completion of germination in barley by inducing the expression of the ABA biosynthetic gene 9-cis-epoxycarotenoid dioxygenase and dampening expression of ABA 8'-hydroxylase, thus increasing ABA content in the grain. We have now created barley transgenic lines downregulating the genes encoding the blue light receptors CRYTOCHROME (CRY1) and CRY2. Our results demonstrate that CRY1 is the key receptor perceiving and transducing the blue light signal in dormant grains.

  17. Influence of barley grain particle size and treatment with citric acid on digestibility, ruminal fermentation and microbial protein synthesis in Holstein calves.

    Science.gov (United States)

    Kazemi-Bonchenari, M; Salem, A Z M; López, S

    2017-08-01

    Chemical and physical treatments of barley grain increase ruminally resistant starch and can improve the rumen fermentation pattern. The objective of the present study was to evaluate the effects of chemical (addition of citric acid, CA) and physical (grinding to two different particle sizes, PS) treatment of barley grain on performance, rumen fermentation, microbial protein yield in the rumen and selected blood metabolites in growing calves. In all, 28 male Holstein calves (172±5.1 kg initial BW) were used in a complete randomised design with a factorial arrangement of 2 barley grain particle sizes×2 levels of citric acid. The diets were as follows: (i) small PS (average 1200 µm) barley grain soaked in water (no CA addition); (ii) small PS barley grain soaked in a CA solution (adding 20 g CA/kg barley); (iii) large PS (average 2400 µm) barley grain soaked in water (no citric acid addition) and (iv) large PS barley grain soaked in a citric acid solution (adding 20 g CA/kg barley). Barley grain was then incorporated at 35% in a total mixed ration and fed to the calves for 11 weeks. Feeding small PS barley decreased feed intake (P=0.02) and average daily weight gain (P=0.01). The addition of CA to barley grain did not affect intake but increased weight gain (P0.05). However, the molar proportion of propionate was increased (P=0.03) when barley was more finely ground, and that of acetate was increased (P=0.04) when CA was added to barley grain. The ruminal concentration of ammonia nitrogen was increased (Pcitric acid increased fibre digestibility of total mixed rations, attenuated the decrease in ruminal pH, and improved weight gain and feed efficiency in male Holstein growing calves fed a high-cereal diet (550 g cereal grain/kg diet).

  18. The grain quality losses of wheat and barley caused by stress of simulated game browsing

    Czech Academy of Sciences Publication Activity Database

    Vejražka, K.; Cerkal, R.; Kamler, Jiří; Dvořák, J.; Knotová, D.

    2009-01-01

    Roč. 37, Suppl. 1 (2009), s. 655-658 ISSN 0133-3720. [Alps-Adria Scientific Workshop /8./. Neum, 27.4.2009-02.05.2009] R&D Projects: GA MZe(CZ) QF4192 Institutional research plan: CEZ:AV0Z60930519 Keywords : biotic stress * damage caused by game * defoliation * leaf area reduction * grain quality * barley * wheat Subject RIV: GF - Plant Pathology, Vermin, Weed, Plant Protection Impact factor: 1.190, year: 2007

  19. Glycoproteins and protein glycations identified in barley grain and malt by 2D-HPLC

    Czech Academy of Sciences Publication Activity Database

    Žídková, Jitka; Petry-Podgorska, Inga; Laštovičková, Markéta; Bobálová, Janette

    2013-01-01

    Roč. 20, č. 1 (2013), s. 43 ISSN 1211-5894. [Discussion in Structural Molecular Biology /11./. 14.03.2013-16.03.2013, Nové Hrady] R&D Projects: GA ČR(CZ) GPP503/12/P395 Institutional support: RVO:68081715 Keywords : barley grain * glycoproteins * 2D-HPLC * MS/MS Subject RIV: CB - Analytical Chemistry, Separation

  20. Barley HvPAPhy_a as transgene provides high and stable phytase activities in mature barley straw and in grains

    DEFF Research Database (Denmark)

    Holme, Inger; Dionisio, Giuseppe; Madsen, Claus Krogh

    2017-01-01

    , the green leaves and in the dry mature vegetative plant parts left after harvest of the grains. The T2-generation of HvPAPhy_a transformed barley showed phytase activity increases up to 19-fold (29 000 phytase units (FTU) per kg in mature grains). Moreover, also in green leaves and mature dry straw, phytase...... activities were increased significantly by 110-fold (52 000 FTU/kg) and 57-fold (51 000 FTU/kg), respectively. The HvPAPhy_a-transformed barley plants with high phytase activities possess triple potential utilities for the improvement of phosphate bioavailability. First of all, the utilization of the mature...... grains as feed to increase the release of bio-available phosphate and minerals bound to the phytate of the grains; secondly, the utilization of the powdered straw either directly or phytase extracted hereof as a supplement to high phytate feed or food; and finally, the use of the stubble to be ploughed...

  1. Mycotoxin production of Alternaria strains isolated from Korean barley grains determined by LC-MS/MS.

    Science.gov (United States)

    Nguyen, Thuong T T; Kim, Jueun; Jeon, Sun Jeong; Lee, Chul Won; Magan, Naresh; Lee, Hyang Burm

    2018-03-02

    Twenty-four Alternaria strains were isolated from barley grain samples. These strains were screened for the production of mycotoxins on rice medium using thin layer chromatography. All 24 strains produced at least one of the five mycotoxins (ALT, AOH, ATX-I, AME, and TeA). Three representative strains, namely EML-BLDF1-4, EML-BLDF1-14, and EML-BLDF1-18, were further analyzed using a new LC-MS/MS-based mycotoxin quantification method. This method was used to detect and quantify Alternaria mycotoxins. We used positive ion electrospray mass spectrometry with multiple reaction mode (MRM) for the simultaneous quantification of various Alternaria mycotoxins produced by these strains. Five Alternaria toxins (ALT, ATX-I, AOH, AME, and TeA) were detected and quantified. Sample preparation included methanol extraction, concentration, and injection into LC-MS/MS. Limit of detection ranged from 0.13 to 4μg/mL and limit of quantification ranged from 0.25 to 8μg/mL. Copyright © 2018 Elsevier B.V. All rights reserved.

  2. Free and esterified carotenoids in pigmented wheat, tritordeum and barley grains.

    Science.gov (United States)

    Paznocht, Luboš; Kotíková, Zora; Šulc, Miloslav; Lachman, Jaromír; Orsák, Matyáš; Eliášová, Marie; Martinek, Petr

    2018-02-01

    Carotenoids are important phytonutrients responsible for the yellow endosperm color in cereal grains. Five carotenoids, namely lutein, zeaxanthin, antheraxanthin, α- and β-carotene, were quantified by HPLC-DAD-MS in fourteen genotypes of wheat, barley and tritordeum harvested in Czechia in 2014 and 2015. The highest carotenoid contents were found in yellow-grained tritordeum HT 439 (12.16μg/gDW), followed by blue-grained wheat V1-131-15 (7.46μg/gDW), and yellow-grained wheat TA 4024 (7.04μg/gDW). Comparing carotenoid contents, blue varieties had lower whereas purple ones had the same or higher levels than conventional bread wheat. Lutein was the main carotenoid found in wheat and tritordeum while zeaxanthin dominated in barley. The majority of cereals contained considerable levels of esterified forms (up to 61%) of which lutein esters prevailed. It was assessed that cereal genotype determines the proportion of free and esterified forms. High temperatures and drought during the growing season promoted carotenoid biosynthesis. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Expression of the Arabidopsis vacuolar H+-pyrophosphatase gene (AVP1) improves the shoot biomass of transgenic barley and increases grain yield in a saline field

    KAUST Repository

    Schilling, Rhiannon K.

    2013-11-22

    Cereal varieties with improved salinity tolerance are needed to achieve profitable grain yields in saline soils. The expression of AVP1, an Arabidopsis gene encoding a vacuolar proton pumping pyrophosphatase (H+-PPase), has been shown to improve the salinity tolerance of transgenic plants in greenhouse conditions. However, the potential for this gene to improve the grain yield of cereal crops in a saline field has yet to be evaluated. Recent advances in high-throughput nondestructive phenotyping technologies also offer an opportunity to quantitatively evaluate the growth of transgenic plants under abiotic stress through time. In this study, the growth of transgenic barley expressing AVP1 was evaluated under saline conditions in a pot experiment using nondestructive plant imaging and in a saline field trial. Greenhouse-grown transgenic barley expressing AVP1 produced a larger shoot biomass compared to segregants, as determined by an increase in projected shoot area, when grown in soil with 150 mm NaCl. This increase in shoot biomass of transgenic AVP1 barley occurred from an early growth stage and also in nonsaline conditions. In a saline field, the transgenic barley expressing AVP1 also showed an increase in shoot biomass and, importantly, produced a greater grain yield per plant compared to wild-type plants. Interestingly, the expression of AVP1 did not alter barley leaf sodium concentrations in either greenhouse- or field-grown plants. This study validates our greenhouse-based experiments and indicates that transgenic barley expressing AVP1 is a promising option for increasing cereal crop productivity in saline fields. © 2013 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  4. Barley grain constituents, starch composition, and structure affect starch in vitro enzymatic hydrolysis.

    Science.gov (United States)

    Asare, Eric K; Jaiswal, Sarita; Maley, Jason; Båga, Monica; Sammynaiken, Ramaswami; Rossnagel, Brian G; Chibbar, Ravindra N

    2011-05-11

    The relationship between starch physical properties and enzymatic hydrolysis was determined using ten different hulless barley genotypes with variable carbohydrate composition. The ten barley genotypes included one normal starch (CDC McGwire), three increased amylose starches (SH99250, SH99073, and SB94893), and six waxy starches (CDC Alamo, CDC Fibar, CDC Candle, Waxy Betzes, CDC Rattan, and SB94912). Total starch concentration positively influenced thousand grain weight (TGW) (r(2) = 0.70, p starch concentration (r(2) = -0.80, p hydrolysis of pure starch (r(2) = -0.67, p starch concentration (r(2) = 0.46, p starch (RS) in meal and pure starch samples. The rate of starch hydrolysis was high in pure starch samples as compared to meal samples. Enzymatic hydrolysis rate both in meal and pure starch samples followed the order waxy > normal > increased amylose. Rapidly digestible starch (RDS) increased with a decrease in amylose concentration. Atomic force microscopy (AFM) analysis revealed a higher polydispersity index of amylose in CDC McGwire and increased amylose genotypes which could contribute to their reduced enzymatic hydrolysis, compared to waxy starch genotypes. Increased β-glucan and dietary fiber concentration also reduced the enzymatic hydrolysis of meal samples. An average linkage cluster analysis dendrogram revealed that variation in amylose concentration significantly (p starch concentration in meal and pure starch samples. RS is also associated with B-type granules (5-15 μm) and the amylopectin F-III (19-36 DP) fraction. In conclusion, the results suggest that barley genotype SH99250 with less decrease in grain weight in comparison to that of other increased amylose genotypes (SH99073 and SH94893) could be a promising genotype to develop cultivars with increased amylose grain starch without compromising grain weight and yield.

  5. Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley.

    Science.gov (United States)

    Mascher, Martin; Schuenemann, Verena J; Davidovich, Uri; Marom, Nimrod; Himmelbach, Axel; Hübner, Sariel; Korol, Abraham; David, Michal; Reiter, Ella; Riehl, Simone; Schreiber, Mona; Vohr, Samuel H; Green, Richard E; Dawson, Ian K; Russell, Joanne; Kilian, Benjamin; Muehlbauer, Gary J; Waugh, Robbie; Fahima, Tzion; Krause, Johannes; Weiss, Ehud; Stein, Nils

    2016-09-01

    The cereal grass barley was domesticated about 10,000 years before the present in the Fertile Crescent and became a founder crop of Neolithic agriculture. Here we report the genome sequences of five 6,000-year-old barley grains excavated at a cave in the Judean Desert close to the Dead Sea. Comparison to whole-exome sequence data from a diversity panel of present-day barley accessions showed the close affinity of ancient samples to extant landraces from the Southern Levant and Egypt, consistent with a proposed origin of domesticated barley in the Upper Jordan Valley. Our findings suggest that barley landraces grown in present-day Israel have not experienced major lineage turnover over the past six millennia, although there is evidence for gene flow between cultivated and sympatric wild populations. We demonstrate the usefulness of ancient genomes from desiccated archaeobotanical remains in informing research into the origin, early domestication and subsequent migration of crop species.

  6. Effects of split nitrogen fertilization on post-anthesis photoassimilates, nitrogen use efficiency and grain yield in malting barley

    DEFF Research Database (Denmark)

    Cai, Jian; Jiang, Dong; Liu, Fulai

    2011-01-01

    photosynthesis after anthesis, dry matter accumulation and assimilates remobilization, nitrogen use efficiency and grain yield to fraction of topdressed nitrogen treatments were investigated in malting barley. Net photosynthetic rate of the penultimate leaf, leaf area index and light extinction coefficient...... and agronomic nitrogen use efficiencies. The enhanced nitrogen use efficiency was corresponding to the improved photosynthetic nitrogen-use efficiency in the leaves at fraction of topdressed nitrogen of 30%. In conclusion, appropriate fraction of topdressed nitrogen application on malting barley improved...

  7. [14C]sucrose uptake and labeling of starch in developing grains of normal segl barley

    International Nuclear Information System (INIS)

    Felker, F.C.; Peterson, D.M.; Nelson, O.E.

    1984-01-01

    Previous work showed that the segl mutant of barley (Hordeum vulgare o Betzes) did not differ from normal Betzes in plant growth, photosynthesis, or fertility, but it produced only shrunken seeds regardless of pollen source. To determine whether defects in sucrose uptake or starch synthesis resulted in the shrunken condition, developing grains of Betzes and segl were cultured in [ 14 C]sucrose solutions after slicing transversely to expose the endosperm cavity and free space. In both young grains (before genotypes differed in dry weight) and older grains (17 days after anthesis, when segl grains were smaller than Betzes), sucrose uptake and starch synthesis were similar in both genotypes on a dry weight basis. To determine if sucrose was hydrolyzed during uptake, spikes of Betzes and segl were allowed to take up [fructose-U- 14 C]sucrose 14 days after anthesis and the radioactivity of endosperm sugars was examined during 3 hours of incubation. Whereas less total radioactivity entered the endosperm and the endosperm cavity (free space) of segl, in both genotypes over 96% of the label of endosperm sugars was in sucrose, and there was no apparent initial or progressive randomization of label among hexose moieties of sucrose as compared to the free space sampled after 1 hour of incubation. The authors conclude that segl endosperms are capable of normal sucrose uptake and starch synthesis and that hydrolysis of sucrose is not required for uptake in either genotype. Evidence suggests abnormal development of grain tissue of maternal origin during growth of segl grains

  8. Murciano-Granadina Goat Performance and Methane Emission after Replacing Barley Grain with Fibrous By-Products.

    Directory of Open Access Journals (Sweden)

    Carla Ibáñez

    Full Text Available The aim of this experiment was to study the effects of substituting dietary barley grain with orange pulp or soybean hulls on energy, nitrogen and carbon balance, methane emission and milk performance in dairy goats. Twelve Murciano-Granadina dairy goats in midlactation were selected and divided into three groups based on similar body weight (42.1 ± 1.2 kg and milk yield (2.16 ± 0.060 kg/goat/day. The experiment was conducted in an incomplete crossover design where one group of four goats was fed a mixed ration of barley grain (BRL, another group of four goats replaced barley grain with orange pulp (OP and the last group of four goats with soybean hulls (SH. After adaptation to diets, the goats were allocated to individual metabolism cages and intake, faeces, urine and milk were recorded and analysed. Then, gas exchange measurements were recorded by a mobile open-circuit indirect calorimetry system using a head box. Dry matter intake was similar for all three groups (2.03 kg/d, on average. No influence of the diet was observed for energy balance and the efficiency of use of metabolizable energy for milk production was 0.61. The OP and SH diets showed greater (P < 0.05 fat mobilization (-42.8 kJ/kg of BW0.75, on average than BRL (19.2 kJ/kg of BW0.75. Pentadecanoic acid (15:0 and heptadecanoic acid (17:0 were potential biomarkers of rumen function because the higher contents found in the milk of OP and SH goats than BRL suggest a negative impact of these diets on rumen bacterial metabolism; probably linked to the lower nitrogen supply of diet OP to synthesize microbial protein and greater content of fat in diet SH. Replacement of cereal grain with fibrous by-products did not increased enteric methane emissions (54.7 L/goat per day, on average. Therefore, lactating goats could utilize dry orange pulp and soybean hulls diets with no detrimental effect on milk performance.

  9. Induction of secondary dormancy by hypoxia in barley grains and its hormonal regulation

    Science.gov (United States)

    Hoang, Hai Ha; Bailly, Christophe; Corbineau, Françoise; Leymarie, Juliette

    2013-01-01

    In barley, primary dormant grains did not germinate at 30 °C in air and at 15 °C in an atmosphere containing less than 10% O2, while they germinated easily at 15 °C in air. O2 tension in embryos measured with microsensors was 15.8% at 15 °C but only 0.3% at 30 °C. Incubation of grains at 30 °C is known to induce secondary dormancy in barley, and it was shown here that secondary dormancy was also induced by a 3 d treatment in O2 tensions lower than 10% at 15 °C. After such treatments, the grains lost their ability to germinate subsequently at 15 °C in air. During seed treatment in 5% O2, embryo abscisic acid (ABA) content decreased more slowly than in air and was not altered after transfer into air. Hypoxia did not alter the expression of ABA metabolism genes after 1 d, and induction of HvNCED2 occurred only after 3 d in hypoxia. Embryo sensitivity to ABA was similar in both primary and hypoxia-induced secondary dormant grains. Gibberellic acid (GA) metabolism genes were highly regulated and regulated earlier by the hypoxia treatment, with major changes in HvGA2ox3, HvGA3ox2 and HvGA20ox1 expression after 1 d, resulting in reduced GA signalling. Although a high temperature has an indirect effect on O2 availability, the data showed that it did not affect expression of prolyl-4-hydroxylases and that induction of secondary dormancy by hypoxia at 15 °C or by high temperature in air involved separate signalling pathways. Induction by hypoxia at 15 °C appears to be more regulated by GA and less by ABA than the induction by high temperature. PMID:23519728

  10. Detection and quantification of ochratoxin A and deoxynivalenol in barley grains by GC-MS and electronic nose.

    Science.gov (United States)

    Olsson, J; Börjesson, T; Lundstedt, T; Schnürer, J

    2002-02-05

    Mycotoxin contamination of cereal grains can be detected and quantified using complex extraction procedures and analytical techniques. Normally, the grain odour, i.e. the presence of non-grain volatile metabolites, is used for quality classification of grain. We have investigated the possibility of using fungal volatile metabolites as indicators of mycotoxins in grain. Ten barley samples with normal odour, and 30 with some kind of off-odour were selected from Swedish granaries. The samples were evaluated with regard to moisture content, fungal contamination, ergosterol content, and levels of ochratoxin A (OA) and deoxynivalenol (DON). Volatile compounds were also analysed using both an electronic nose and gas chromatography combined with mass spectrometry (GC-MS). Samples with normal odour had no detectable ochratoxin A and average DON contents of 16 microg kg(-1) (range 0-80), while samples with off-odour had average OA contents of 76 microg kg(-1) (range 0-934) and DON contents of 69 microg kg(-1) (range 0-857). Data were evaluated by multivariate data analysis using projection methods such as principal component analysis (PCA) and partial least squares (PLS). The results show that it was possible to classify the OA level as below or above the maximum limit of 5 microg kg(-1) cereal grain established by the Swedish National Food Administration, and that the DON level could be estimated using PLS. Samples with OA levels below 5 microg kg(-1) had higher concentration of aldehydes (nonanal, 2-hexenal) and alcohols (1-penten-3-ol, 1-octanol). Samples with OA levels above 5 microg kg(-1) had higher concentrations of ketones (2-hexanone, 3-octanone). The GC-MS system predicted OA concentrations with a higher accuracy than the electronic nose, since the GC-MS misclassified only 3 of 37 samples and the electronic nose 7 of 37 samples. No correlation was found between odour and OA level, as samples with pronounced or strong off-odours had OA levels both below and above 5

  11. Isolation of tissues and preservation of RNA from intact, germinated barley grain.

    Science.gov (United States)

    Betts, Natalie S; Berkowitz, Oliver; Liu, Ruijie; Collins, Helen M; Skadhauge, Birgitte; Dockter, Christoph; Burton, Rachel A; Whelan, James; Fincher, Geoffrey B

    2017-08-01

    Isolated barley (Hordeum vulgare L.) aleurone layers have been widely used as a model system for studying gene expression and hormonal regulation in germinating cereal grains. A serious technological limitation of this approach has been the inability to confidently extrapolate conclusions obtained from isolated tissues back to the whole grain, where the co-location of several living and non-living tissues results in complex tissue-tissue interactions and regulatory pathways coordinated across the multiple tissues. Here we have developed methods for isolating fragments of aleurone, starchy endosperm, embryo, scutellum, pericarp-testa, husk and crushed cell layers from germinated grain. An important step in the procedure involves the rapid fixation of the intact grain to freeze the transcriptional activity of individual tissues while dissection is effected for subsequent transcriptomic analyses. The developmental profiles of 19 611 gene transcripts were precisely defined in the purified tissues and in whole grain during the first 24 h of germination by RNA sequencing. Spatial and temporal patterns of transcription were validated against well-defined data on enzyme activities in both whole grain and isolated tissues. Transcript profiles of genes involved in mitochondrial assembly and function were used to validate the very early stages of germination, while the profiles of genes involved in starch and cell wall mobilisation matched existing data on activities of corresponding enzymes. The data will be broadly applicable for the interrogation of co-expression and differential expression patterns and for the identification of transcription factors that are important in the early stages of grain and seed germination. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

  12. Integrating statistical and ecophysiological analysis of genotype by environment interaction for grain filling of barley in Mediterranean areas. I. Individual grain weight

    NARCIS (Netherlands)

    Voltas, J.; Eeuwijk, van F.A.; Sombrero, A.; Lafarga, A.; Igartua, E.; Romagosa, I.

    1999-01-01

    In Mediterranean-type environments, grain weight of barley (Hordeum vulgare L.) is influenced by the presence of terminal abiotic stresses such as drought or elevated temperature. The relative importance of these climatic constraints acting together prior to and after anthesis, as well as the

  13. Integrated transcriptomics and proteomics analysis of storage protein composition in developing barley grain to improve nutritional profile

    DEFF Research Database (Denmark)

    Kaczmarczyk, Agnieszka Ewa; Dionisio, Giuseppe; Renaut, Jenny

    2012-01-01

    The aim of the study was to understand the molecular and biochemical mechanisms underpinning the effect of nitrogen (N) on barley (Hordeum vulgare) storage protein production (hordeins) during grain filling. Using a combination of advanced biochemistry methods, we could comprehensively describe c...

  14. Inositol phosphates from barley low-phytate grain mutants analysed by metal-dye detection HPLC and NMR

    DEFF Research Database (Denmark)

    Hatzack, F.; Hübel, F.; Zhang, W.

    2001-01-01

    Inositolphosphates from barley low-phytate grain mutants and their parent variety were analysed by metal-dye detection HPLC and NMR. Compound assignment was carried out by comparison of retention times using a chemical hydrolysate of phytate [Ins(1,2,3,4,5,6)P(6)] as a reference; Co...

  15. Effects of particle size of processed barley grain, enzyme addition and microwave treatment on disappearance and gas production for feedlot cattle

    Directory of Open Access Journals (Sweden)

    Shin-ichi Tagawa

    2017-04-01

    Full Text Available Objective The effects of particle size of processed barley grain, enzyme addition and microwave treatment on in vitro dry matter (DM disappearance (DMD, gas production and fermentation pH were investigated for feedlot cattle. Methods Rumen fluid from four fistulated feedlot cattle fed a diet of 860 dry-rolled barley grain, 90 maize silage and 50 supplement g/kg DM was used as inoculum in 3 batch culture in vitro studies. In Experiment 1, dry-rolled barley and barley ground through a 1-, 2-, or 4-mm screen were used to obtain four substrates differing in particle size. In Experiment 2, cellulase enzyme (ENZ from Acremonium cellulolyticus Y-94 was added to dry-rolled and ground barley (2-mm at 0, 0.1, 0.5, 1, and 2 mg/g, while Experiment 3 examined the interactions between microwaving (0, 30, and 60 s microwaving and ENZ addition (0, 1, and 2 mg/g using dry-rolled barley and 2-mm ground barley. Results In Experiment 1, decreasing particle size increased DMD and gas production, and decreased fermentation pH (p<0.01. The DMD (g/kg DM of the dry-rolled barley after 24 h incubation was considerably lower (p<0.05 than that of the ground barley (119.1 dry-rolled barley versus 284.8 for 4-mm, 341.7 for 2-mm; and 358.6 for 1-mm. In Experiment 2, addition of ENZ to dry-rolled barley increased DMD (p<0.01 and tended to increase (p = 0.09 gas production and decreased (p<0.01 fermentation pH, but these variables were not affected by ENZ addition to ground barley. In Experiment 3, there were no interactions between microwaving and ENZ addition after microwaving for any of the variables. Microwaving had minimal effects (except decreased fermentation pH, but consistent with Experiment 2, ENZ addition increased (p<0.01 DMD and gas production, and decreased (p<0.05 fermentation pH of dry-rolled barley, but not ground barley. Conclusion We conclude that cellulase enzymes can be used to increase the rumen disappearance of barley grain when it is coarsely processed

  16. The barley anion channel, HvALMT1, has multiple roles in guard cell physiology and grain metabolism.

    Science.gov (United States)

    Xu, Muyun; Gruber, Benjamin D; Delhaize, Emmanuel; White, Rosemary G; James, Richard A; You, Jiangfeng; Yang, Zhenming; Ryan, Peter R

    2015-01-01

    The barley (Hordeum vulgare) gene HvALMT1 encodes an anion channel in guard cells and in certain root tissues indicating that it may perform multiple roles. The protein localizes to the plasma membrane and facilitates malate efflux from cells when constitutively expressed in barley plants and Xenopus oocytes. This study investigated the function of HvALMT1 further by identifying its tissue-specific expression and by generating and characterizing RNAi lines with reduced HvALMT1 expression. We show that transgenic plants with 18-30% of wild-type HvALMT1 expression had impaired guard cell function. They maintained higher stomatal conductance in low light intensity and lost water more rapidly from excised leaves than the null segregant control plants. Tissue-specific expression of HvALMT1 was investigated in developing grain and during germination using transgenic barley lines expressing the green fluorescent protein (GFP) with the HvALMT1 promoter. We found that HvALMT1 is expressed in the nucellar projection, the aleurone layer and the scutellum of developing barley grain. Malate release measured from isolated aleurone layers prepared from imbibed grain was significantly lower in the RNAi barley plants compared with control plants. These data provide molecular and physiological evidence that HvALMT1 functions in guard cells, in grain development and during germination. We propose that HvALMT1 releases malate and perhaps other anions from guard cells to promote stomatal closure. The likely roles of HvALMT1 during seed development and grain germination are also discussed. © 2014 Scandinavian Plant Physiology Society.

  17. Purification, characterization and stability of barley grain peroxidase BP1, a new type of plant peroxidase

    DEFF Research Database (Denmark)

    Rasmussen, Christine B; Henriksen, Anette; Abelskov, A. Katrine

    1997-01-01

    -protoporphyrin IX, which is characteristic of plant peroxidases. BP 1 is stable from pH 3 to 11, indicating that its unusual spectral characteristics do not result from enzyme instability. The thermostability is also normal with a melting temperature of 75 degrees C at pH 6.6, and 67 degrees C at pH 4.0 and 8......The major peroxidase of barley grain (BP 1) has enzymatic and spectroscopic properties that are very differeant from those of other known plant peroxidases (EC 1.11.1.7) and can therefore contribute to the understanding of the many physiological functions ascribed to these enzymes. To study.......3. It is clear that the unusual properties of BP 1 are genuine, and reflect a novel regulation of plant peroxidase function....

  18. Bulk carbohydrate grain filling of barley ß-glucan mutants studied by 1H HR MAS NMR

    DEFF Research Database (Denmark)

    Seefeldt, Helene Fast; Larsen, Flemming Hofmann; Viereck, Nanna

    2008-01-01

    ) during grain filling. For the first time, 1H HR MAS NMR spectra of flour from immature barley seeds are analyzed. Spectral assignments are made using two-dimensional (2D) NMR methods. Both α- and β-glucan biosynthesis were characterized by inspection of the spectra as well as by calibration......Temporal and genotypic differences in bulk carbohydrate accumulation in three barley genotypes differing in the content of mixed linkage β-(1→3),(1→4)-D-glucan (β-glucan) and starch were investigated using proton high-resolution, magic angle spinning, nuclear magnetic resonance (1H HR MAS NMR...

  19. Grain yield, symbiotic N2 fixation and interspecific competition for inorganic N in pea-barley intercrops

    DEFF Research Database (Denmark)

    Jensen, E.S.

    1996-01-01

    g N-15-labeled N m(-2). The effect of intercropping on the dry matter and N yields, competition for inorganic N among the intercrop components, symbiotic fixation in pea and N transfer from pea to barley were determined. As an average of four years the grain yields were similar in monocropped pea...... only 9% of total fertilizer-N recovery in the intercrop. The amount of symbiotic N-2 fixation in the intercrop was less than expected from its composition and the fixation in monocrop. This indicates that the competition from barley had a negative effect on the fixation, perhaps via shading...... by the intercrop components, resulting in reduced competition for inorganic N, rather than a facilitative effect, in which symbiotically fixed N-2 is made available to barley....

  20. Volatiles for mycological quality grading of barley grains: determinations using gas chromatography-mass spectrometry and electronic nose.

    Science.gov (United States)

    Olsson, J; Börjesson, T; Lundstedt, T; Schnürer, J

    2000-09-10

    The possibility of using an electronic nose or gas chromatography combined with mass spectrometry (GC-MS) to quantify ergosterol and colony forming units (CFU) of naturally contaminated barley samples was investigated. Each sample was split into three parts for (i) ergosterol and CFU analysis, (ii) measurements with the electronic nose and (iii) identification of volatiles collected on an adsorbent with a GC-MS system. Forty samples were selected after sensory analysis to obtain 10 samples with normal odour and 30 with some degree of off-odour. The data set of volatile compounds and the data collected from the electronic nose were evaluated by multivariate analyse techniques. SIMCA classification (soft independent modelling of class analogy) was used for objective evaluation of the usefulness of the data from the GC-MS or electronic nose measurements for classification of grain samples as normal or with off-odour. The main volatile compounds of grain with normal odour were 2-hexenal, benzaldehyde and nonanal, while 3-octanone, methylheptanone and trimethylbenzene were the main volatile compounds of grain with off-odours. Using data from the electronic nose three samples of 40 were misclassified, while data analysis of the volatile compounds detected with the GC-MS, led to six misclassified samples. Regression models (partial least-squares, PLS) were built to predict ergosterol- and CFU-levels with data from the GC-MS or electronic nose measurements. PLS models based on both GC-MS and electronic nose data could be used to predict the ergosterol levels with high accuracy and with low root mean square error of prediction (RMSEP). CFU values from naturally infected grain could not be predicted with the same degree of confidence.

  1. Quantitative Trait Loci and Maternal Effects Affecting the Strong Grain Dormancy of Wild Barley (Hordeum vulgare ssp. spontaneum

    Directory of Open Access Journals (Sweden)

    Shingo Nakamura

    2017-10-01

    Full Text Available Wild barley (Hordeum vulgare ssp. spontaneum has strong grain dormancy, a trait that may enhance its survival in non-cultivated environments; by contrast, cultivated barley (Hordeum vulgare ssp. vulgare has weaker dormancy, allowing uniform germination in cultivation. Malting barley cultivars have been bred for especially weak dormancy to optimize their use in malt production. Here, we analyzed the genetic mechanism of this difference in seed dormancy, using recombinant inbred lines (RILs derived from a cross between the wild barley accession ‘H602’ and the malting barley cultivar ‘Kanto Nakate Gold (KNG’. Grains of H602 and KNG harvested at physiological maturity and dried at 30°C for 7 days had germination of approximately 0 and 100%, respectively. Analysis of quantitative trait loci (QTL affecting grain dormancy identified the well-known major dormancy QTL SD1 and SD2 (located near the centromeric region and at the distal end of the long arm of chromosome 5H, respectively, and QTL at the end of the long arm of chromosome 4H and in the middle of the long arm of chromosome 5H. We designated these four QTL Qsd1-OK, Qsd2-OK, Qsdw-4H, and Qsdw-5H, and they explained approximately 6, 38, 3, and 13% of the total phenotypic variation, respectively. RILs carrying H602 alleles showed increased dormancy levels for all QTL. The QTL acted additively and did not show epistasis or QTL–environment interactions. Comparison of QTL locations indicated that all QTL except Qsdw-5H are likely the same as the QTL previously detected in the doubled haploid population from a cross between the malting cultivar ‘Haruna Nijo’ and ‘H602.’ We further examined Qsd2-OK and Qsdw-5H by analyzing the segregation of phenotypes and genotypes of F2 progenies derived from crosses between RILs carrying specific segments of chromosome 5H from H602 in the KNG background. This analysis confirmed that the two genomic regions corresponding to these QTL are involved in

  2. Quantitative Trait Loci and Maternal Effects Affecting the Strong Grain Dormancy of Wild Barley (Hordeum vulgaressp.spontaneum).

    Science.gov (United States)

    Nakamura, Shingo; Pourkheirandish, Mohammad; Morishige, Hiromi; Sameri, Mohammad; Sato, Kazuhiro; Komatsuda, Takao

    2017-01-01

    Wild barley ( Hordeum vulgare ssp. spontaneum ) has strong grain dormancy, a trait that may enhance its survival in non-cultivated environments; by contrast, cultivated barley ( Hordeum vulgare ssp. vulgare ) has weaker dormancy, allowing uniform germination in cultivation. Malting barley cultivars have been bred for especially weak dormancy to optimize their use in malt production. Here, we analyzed the genetic mechanism of this difference in seed dormancy, using recombinant inbred lines (RILs) derived from a cross between the wild barley accession 'H602' and the malting barley cultivar 'Kanto Nakate Gold (KNG)'. Grains of H602 and KNG harvested at physiological maturity and dried at 30°C for 7 days had germination of approximately 0 and 100%, respectively. Analysis of quantitative trait loci (QTL) affecting grain dormancy identified the well-known major dormancy QTL SD1 and SD2 (located near the centromeric region and at the distal end of the long arm of chromosome 5H, respectively), and QTL at the end of the long arm of chromosome 4H and in the middle of the long arm of chromosome 5H. We designated these four QTL Qsd1-OK , Qsd2-OK , Qsdw-4H , and Qsdw-5H , and they explained approximately 6, 38, 3, and 13% of the total phenotypic variation, respectively. RILs carrying H602 alleles showed increased dormancy levels for all QTL. The QTL acted additively and did not show epistasis or QTL-environment interactions. Comparison of QTL locations indicated that all QTL except Qsdw-5H are likely the same as the QTL previously detected in the doubled haploid population from a cross between the malting cultivar 'Haruna Nijo' and 'H602.' We further examined Qsd2-OK and Qsdw-5H by analyzing the segregation of phenotypes and genotypes of F 2 progenies derived from crosses between RILs carrying specific segments of chromosome 5H from H602 in the KNG background. This analysis confirmed that the two genomic regions corresponding to these QTL are involved in the regulation of

  3. Influence of barley grain treated with alkaline compounds or organic extracts on site and extent of digestion of starch

    Directory of Open Access Journals (Sweden)

    Reza Naseroleslami

    2018-02-01

    Full Text Available Objective Two ex vivo experiments were conducted to verify the effect of barley grain (Nusrat cultivar treated with alkaline compounds (AC including alum, ammonium, and sodium hydroxide or cation-exchanged organic extracts (OE prepared from alfalfa hay, sugar beet pulp and Ulva Fasciata, on extent and digestion of starch. Methods In the first study, the in vitro first order disappearance kinetic parameters of dry matter (DM, crude protein (CP and starch were estimated using a non-linear model (D(t = D(i · e(−kd · time + I, where: D(t = potentially digestible residues at any time, D(i = potentially digestible fraction at any time, kd = fractional rate constant of digestion (/h, I = indigestible fraction at any time. In the second experiment, the ruminal and post-ruminal disappearance of DM, CP, and starch were determined using in situ mobile nylon bag. Results Barley grains treated with alum and alfalfa extract had a higher constant rate of starch digestion (0.11 and 0.09/h than others. Barley grain treated with OE had a higher constant rate of CP digestion and that of treated with AC had a higher constant rate of starch digestion (0.08 and 0.11/h compared with those of the other treatments. The indigestible fraction of starch treated with alum and sugar beet pulp extract was higher than that of the control group (0.24 and 0.25 vs 0.21. Barley grain treated with AC and OE had significant CP disappearance in the rumen, post-rumen and total tract, and also starch disappearance for post-rumen and total tract compared with the untreated (p<0.001. Conclusion This study demonstrated that AC and OE might have positive effects on the starch degradation of the barley grain. In addition, treating barley grain with alum and sugar beet pulp extract could change the site and extend digestion of protein and starch.

  4. High moisture airtight storage of barley and triticale: Effect of moisture level and grain processing on nitrogen and phosphorus solubility

    DEFF Research Database (Denmark)

    Ton Nu, Mai Anh; Blaabjerg, Karoline; Labouriau, Rodrigo

    2015-01-01

    The aim of this study was to evaluate the effect of storage time, grain processing (whole vs. rolled) and the combination of phytase, xylanase, β-glucanase and protease on nitrogen (N) and phosphorus (P) solubility during high moisture airtight (HMA) storage of barley and triticale at various...... moisture levels (20, 23, 26 and 29% moisture) and to compare HMA storage of cereals with dry storage for 49 days. Dry stored barley and triticale (10 and 13% moisture, respectively) were kept in 10 L plastic buckets for 0 and 49 days. HMA stored cereals were kept in airtight bags (400 g per bag) at 15 °C......% moisture increased N and P solubility and decreased ratio of phytate P to total P (Phytate P:Total P as a measure of phytate degradation) compared with grains before storage (P

  5. Differential appearance of isoforms and cultivar variation in protein temporal profiles revealed in the maturing barley grain proteome

    DEFF Research Database (Denmark)

    Finnie, Christine; Bak-Jensen, K.S.; Laugesen, Sabrina

    2006-01-01

    Proteome analysis of mature barley (Hordeum vulgare subsp. vulgare) seeds has led to the identification of proteins in about 450 spots on 2D-gels. To shed light on the role of some of these proteins, their temporal appearance was monitored over 5 weeks during grain-filling and maturation of field......-grown barley. Appearance profiles are described for 105 proteins identified in 185 2D-gel spots in the overlapping pI ranges 4-7 and 6-11. Grouping of proteins according to appearance across functional categories revealed instances of differential regulation of protein forms. Thus, a single 1-cys......-peroxiredoxin isoform was identified in three spots, one present throughout grain filling, one appearing during desiccation and one observed only in mature seeds. This suggested post-translational modification of the protein to different degrees during seed maturation. Distinct isoforms of several proteins were...

  6. Study of Barley Grain Molecular Structure for Ruminants Using DRIFT, FTIR-ATR and Synchrotron Radiation Infrared Microspectroscopy (SR-IMS): A Review

    Science.gov (United States)

    Yu, Peiqiang

    2012-05-01

    Barley inherent structures are highly associated with nutrient utilization and availability in both humans and animals. Barley has different degradation kinetics compared with other cereal grains. It has a relatively higher degradation rate and extent, which often cause digestive disorder in the rumen. Therefore understanding barley inherent structure at cellular and molecular levels and processing-induced structure changes is important, because we can manipulate barley inherent structures and digestive behaviors. Several molecular spectroscopy techniques can be used to detect barley inherent structures at cellular and molecular levels. This article reviews several applications of the IR molecular spectral bioanalytical techniques - DRIFT, FT/IR-ATR and SR-IMS for barley chemistry, molecular structure and molecular nutrition research

  7. Replacement of Dietary Barley Grain by Different Levels of Restaurant Waste and Its Effect on Hybrid Lambs Performance

    Directory of Open Access Journals (Sweden)

    M. Moradi

    2013-08-01

    Full Text Available This study was conducted to determine the nutritive value of restaurant waste (RW, substituted with dietary barley grain and its effects on the performance of finishing lambs. Dry matter, organic matter, crude protein, ether extract and ash content of RW were 33.4, 95.9, 15.1, 14.1 and 4 percent respectively. 36 male and female lambs, (initial weight of 33.4± 0.5 and 29.7± 0.5 kg respectively were used in the experiment. The experimental lambs were from three hybrid groups: Ghezel*Merino (n=12, Merino*Moghani (n=18 and Ghezel*Baluchi (n=6. Dietary barley grains at the levels of 50 and 100 percent were replaced with RW and along with control group (no RW compromised experimental treatments.. Experimental diets were offered three times daily at 6.00, 14.00 and 20.00 hours. Dry matter intake was not significantly different between the treatments. The average daily gain and feed conversion ratio were differ between sexes. Weight gain of male and female lambs during the fattening period was 250.3 and 171.6 g/day respectively. Replacement of barley grain with RW in the 3rd treatment significantly affected ruminal pH, N-NH3 and total volatile fatty acids content and fecal pH, as well as blood glucose and BUN comparing the control group. Replacement of RW with barley grain at levels of 50 and 100 percent reduced cost of the live weight gain up to 24 and 37.7 percent respectively versus control diet.

  8. Fungal community, Fusarium head blight complex and secondary metabolites associated with malting barley grains harvested in Umbria, central Italy.

    Science.gov (United States)

    Beccari, Giovanni; Senatore, Maria Teresa; Tini, Francesco; Sulyok, Michael; Covarelli, Lorenzo

    2018-05-20

    In recent years, due to the negative impact of toxigenic mycobiota and of the accumulation of their secondary metabolites in malting barley grains, monitoring the evolution of fungal communities in a certain cultivation area as well as detecting the different mycotoxins present in the raw material prior to malting and brewing processes have become increasingly important. In this study, a survey was carried out on malting barley samples collected after their harvest in the Umbria region (central Italy). Samples were analyzed to determine the composition of the fungal community, to identify the isolated Fusarium species, to quantify fungal secondary metabolites in the grains and to characterize the in vitro mycotoxigenic profile of a subset of the isolated Fusarium strains. The fungal community of barley grains was mainly composed of microorganisms belonging to the genus Alternaria (77%), followed by those belonging to the genus Fusarium (27%). The Fusarium head blight (FHB) complex was represented by nine species with the predominance of Fusarium poae (37%), followed by Fusarium avenaceum (23%), Fusarium graminearum (22%) and Fusarium tricinctum (7%). Secondary metabolites biosynthesized by Alternaria and Fusarium species were present in the analyzed grains. Among those biosynthesized by Fusarium species, nivalenol and enniatins were the most prevalent ones. Type A trichothecenes (T-2 and HT-2 toxins) as well as beauvericin were also present with a high incidence. Conversely, the number of samples contaminated with deoxynivalenol was low. Conjugated forms, such as deoxynivalenol-3-glucoside and HT-2-glucoside, were detected for the first time in malting barley grains cultivated in the surveyed area. In addition, strains of F. avenaceum and F. tricinctum showed the ability to biosynthesize in vitro high concentrations of enniatins. The analysis of fungal secondary metabolites, both in the grains and in vitro, revealed also the presence of other compounds, for which

  9. Short communication: Effects of processing methods of barley grain in starter diets on feed intake and performance of dairy calves.

    Science.gov (United States)

    Jarrah, A; Ghorbani, G R; Rezamand, P; Khorvash, M

    2013-01-01

    The present study was conducted to evaluate the effects of different processing methods of barley grain in starter rations on feed intake, average daily gain, feed efficiency, skeletal growth, fecal score, and rumen pH of dairy calves. Thirty-two Holstein dairy calves (16 female and 16 male) were randomly allocated to 1 of 4 treatments consisting of coarse ground, whole, steam-rolled, or roasted barley from d 4 to 56 of birth in a completely randomized design. Starter diets were formulated to have similar ingredients and composition. All calves had free access to water and feed throughout the study period and received 4 L of milk/d from a bottle from d 4 to 41, 2L/d from d 41 to 45, and weaning occurred on d 45. Feed intake and fecal score were recorded daily. Body weight and skeletal growth measures were recorded on d 4 (beginning of the study), 45, and 56. Rumen fluid and blood samples were collected on d 35, 45, and 56. Data were analyzed using PROC MIXED of SAS (SAS Institute Inc., Cary, NC). The results indicate that different methods of processing barley had no detectable effect on dry matter intake, average daily gain, and feed efficiency and that skeletal growth, health, and rumen pH were not affected by dietary treatments. In conclusion, the results show that different processing methods of barley included in starter diets had no detectable effect on the performance of dairy calves under our experimental conditions. Therefore, feeding whole or coarsely ground barley would be a more economical method compared with steam rolled or roasted barley. Copyright © 2013 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  10. Metabolite Profiling of Barley Grains Subjected to Water Stress: To Explain the Genotypic Difference in Drought-Induced Impacts on Malting Quality

    Directory of Open Access Journals (Sweden)

    Xiaojian Wu

    2017-09-01

    Full Text Available Grain weight and protein content will be reduced and increased, respectively, when barley is subjected to water stress after anthesis, consequently deteriorating the malt quality. However, such adverse impact of water stress differs greatly among barley genotypes. In this study, two Tibetan wild barley accessions and two cultivated varieties differing in water stress tolerance were used to investigate the genotypic difference in metabolic profiles during grain-filling stage under drought condition. Totally, 71 differently accumulated metabolites were identified, including organic acids, amino acids/amines, and sugars/sugar alcohols. Their relative contents were significantly affected by water stress for all genotypes and differed distinctly between the wild and cultivated barleys. The principal component analysis of metabolites indicated that the Tibetan wild barley XZ147 possessed a unique response to water stress. When subjected to water stress, the wild barley XZ147 showed the most increase of β-amylase activity among the four genotypes, as a result of its higher lysine content, less indole-3-acetic acid (IAA biosynthesis, more stable H2O2 homeostasis, and more up-regulation of BMY1 gene. On the other hand, XZ147 had the most reduction of β-glucan content under water stress than the other genotypes, which could be explained by the faster grain filling process and the less expression of β-glucan synthase gene GSL7. All these results indicated a great potential for XZ147 in barley breeding for improving water stress tolerance.

  11. Breeding and genetic peculiarities of modern spring barley varieties for grain number per main ear

    Directory of Open Access Journals (Sweden)

    С. П. Васильківський

    2017-09-01

    Full Text Available Purpose. To reveal breeding and genetic peculiarities of modern spring barley varieties for the “number of grains per main ear” trait and identify genetic sources of increased combining ability for involving in hybridization. Methods. Investigations were carried out at the V. M. Remeslo Myronivka Institute of Wheat of NAAS of Ukraine. Modern varieties of domestic (‘Virazh’, ‘Talisman Myronivskyi’, ‘Komandor’ and foreign (‘KWS Aliciana’, ‘KWS Bambina’, ‘Zhana’, ‘Explorer’ breeding were involved in crossing for a full (7´7 diallel scheme. Parents and F1 were studied in field conditions during 2014–2016. Results. The analysis of variance of combining ability has shown a significant advantage in varying of general combining ability (GCA effects. The mean square of specific combining ability (SCA was significantly less than the GCA, but reliable throughout the years. The reciprocal effect was reliable only in 2014. Stably high effects of GCA during all years of investigations were noted in the varieties ‘KWS Aliciana’ (1.18–1.62 and ‘Virazh’ (1.33–1.48. The variety ‘KWS Bambina’ was characterized by lower but reliable positive effects of GCA (0.43–0.99 as compared to mentioned above. Non-allelic gene interaction was not found, that allowed to calculate the basic parameters of genetic variation. During all years of investigations, dominant effects of genes (H1 and H2 prevailed over the additive (D ones in phenotypic expression of grain number per main ear. Mean degree of dominance in the experiment (H1/D has shown overdominance. The same pattern was also distinctive for the index of mean degree of dominance in the loci . The dominance was reliably directed. Dominant effects of genes increased grain content, and recessive ones reduced it. At least 3–4 genes (groups of genes have been revealed which determined the effects of dominance. At the same time, recessive genes (F<0 or gene effects were

  12. Improved bioavailability of dietary phenolic acids in whole grain barley and oat groat following fermentation with probiotic Lactobacillus acidophilus , Lactobacillus johnsonii , and Lactobacillus reuteri.

    Science.gov (United States)

    Hole, Anastasia S; Rud, Ida; Grimmer, Stine; Sigl, Stefanie; Narvhus, Judith; Sahlstrøm, Stefan

    2012-06-27

    The aim of this study was to improve the bioavailability of the dietary phenolic acids in flours from whole grain barley and oat groat following fermentation with lactic acid bacteria (LAB) exhibiting high feruloyl esterase activity (FAE). The highest increase of free phenolic acids was observed after fermentation with three probiotic strains, Lactobacillus johnsonii LA1, Lactobacillus reuteri SD2112, and Lactobacillus acidophilus LA-5, with maximum increases from 2.55 to 69.91 μg g(-1) DM and from 4.13 to 109.42 μg g(-1) DM in whole grain barley and oat groat, respectively. Interestingly, higher amounts of bound phenolic acids were detected after both water treatment and LAB fermentation in whole grain barley, indicating higher bioaccessibility, whereas some decrease was detected in oat groat. To conclude, cereal fermentation with specific probiotic strains can lead to significant increase of free phenolic acids, thereby improving their bioavailability.

  13. Inheritance analysis and mapping of quantitative trait loci (QTL controlling individual anthocyanin compounds in purple barley (Hordeum vulgare L. grains.

    Directory of Open Access Journals (Sweden)

    Xiao-Wei Zhang

    Full Text Available Anthocyanin-rich barley can have great potential in promoting human health and in developing nutraceuticals and functional foods. As different anthocyanin compounds have different antioxidant activities, breeding cultivars with pre-designed anthocyanin compositions could be highly desirable. Working toward this possibility, we assessed and reported for the first time the genetic control of individual anthocyanin compounds in barley. Of the ten anthocyanins assessed, two, peonidin-3-glucoside (P3G and cyanidin-3-glucoside (C3G, were major components in the purple pericarp barley genotype RUSSIA68. Quantitative trait locus (QTL mapping showed that both anthocyanin compounds were the interactive products of two loci, one located on chromosome arm 2HL and the other on 7HS. However, the two different anthocyanin components seem to be controlled by different interactions between the two loci. The effects of the 7HS locus on P3G and C3G were difficult to detect without removing the effect of the 2HL locus. At least one copy of the 2HL alleles from the purple pericarp parent was required for the synthesis of P3G. This does not seem to be the case for the production of C3G which was produced in each of all the different allele combinations between the two loci. Typical maternal effect was also observed in the inheritance of purple pericarp grains in barley. The varied values of different compounds, coupled with their different genetic controls, highlight the need for targeting individual anthocyanins in crop breeding and food processing.

  14. Inheritance analysis and mapping of quantitative trait loci (QTL) controlling individual anthocyanin compounds in purple barley (Hordeum vulgare L.) grains.

    Science.gov (United States)

    Zhang, Xiao-Wei; Jiang, Qian-Tao; Wei, Yu-Ming; Liu, Chunji

    2017-01-01

    Anthocyanin-rich barley can have great potential in promoting human health and in developing nutraceuticals and functional foods. As different anthocyanin compounds have different antioxidant activities, breeding cultivars with pre-designed anthocyanin compositions could be highly desirable. Working toward this possibility, we assessed and reported for the first time the genetic control of individual anthocyanin compounds in barley. Of the ten anthocyanins assessed, two, peonidin-3-glucoside (P3G) and cyanidin-3-glucoside (C3G), were major components in the purple pericarp barley genotype RUSSIA68. Quantitative trait locus (QTL) mapping showed that both anthocyanin compounds were the interactive products of two loci, one located on chromosome arm 2HL and the other on 7HS. However, the two different anthocyanin components seem to be controlled by different interactions between the two loci. The effects of the 7HS locus on P3G and C3G were difficult to detect without removing the effect of the 2HL locus. At least one copy of the 2HL alleles from the purple pericarp parent was required for the synthesis of P3G. This does not seem to be the case for the production of C3G which was produced in each of all the different allele combinations between the two loci. Typical maternal effect was also observed in the inheritance of purple pericarp grains in barley. The varied values of different compounds, coupled with their different genetic controls, highlight the need for targeting individual anthocyanins in crop breeding and food processing.

  15. Characterization of the Microchemical Structure of Seed Endosperm within a Cellular Dimension among Six Barley Varieties with Distinct Degradation Kinetics, Using Ultraspatially Resolved Synchrotron-Based Infrared Microspectroscopy

    Science.gov (United States)

    Liu, Na; Yu, Peiqiang

    2013-01-01

    Barley varieties have similar chemical composition but exhibit different rumen degradation kinetics and nutrient availability. These biological differences may be related to molecular, structural, and chemical makeup among the seed endosperm tissue. No detailed study was carried out. The objectives of this study were: (1) to use a molecular spectroscopy technique, synchrotron-based Fourier transform infrared microspectroscopy (SFTIRM), to determine the microchemical–structural features in seed endosperm tissue of six developed barley varieties; (2) to study the relationship among molecular–structural characteristics, degradation kinetics, and nutrient availability in six genotypes of barley. The results showed that inherent microchemical–structural differences in the endosperm among the six barley varieties were detected by the synchrotron-based analytical technique, SFTIRM, with the univariate molecular spectral analysis. The SFTIRM spectral profiles differed (P makeup within cellular and subcellular dimensions without destruction of the inherent structure of cereal grain tissue. PMID:20524612

  16. Barley germination

    DEFF Research Database (Denmark)

    Daneri-Castro, Sergio N.; Svensson, Birte; Roberts, Thomas H.

    2016-01-01

    Germination of barley grain is central to the malting industry and is a valuable model for cereal grain germination. Our current understanding of the complexity of germination at the molecular level is facilitated by access to genomic, transcriptomic, proteomic and metabolomic data. Here we review...... recent progress in barley germination research and discuss the factors to be considered when designing 'omics' experiments and interpreting the results. These factors include the structural and functional relationships between the various tissues of the barley caryopsis and the timing of the events...... of germination in the context of industrial malting. For transcriptomics, recent advances in sequencing the barley genome allow next-generation sequencing approaches to reveal novel effects of variety and environment on germination. For proteomics, selection of the source tissue(s) and the protein extraction...

  17. QTL mapping of root traits in phosphorus-deficient soils reveals important genomic regions for improving NDVI and grain yield in barley.

    Science.gov (United States)

    Gong, Xue; McDonald, Glenn

    2017-09-01

    Major QTLs for root rhizosheath size are not correlated with grain yield or yield response to phosphorus. Important QTLs were found to improve phosphorus efficiency. Root traits are important for phosphorus (P) acquisition, but they are often difficult to characterize and their breeding values are seldom assessed under field conditions. This has shed doubts on using seedling-based criteria of root traits to select and breed for P efficiency. Eight root traits were assessed under controlled conditions in a barley doubled-haploid population in soils differing in P levels. The population was also phenotyped for grain yield, normalized difference vegetation index (NDVI), grain P uptake and P utilization efficiency at maturity (PutE GY ) under field conditions. Several quantitative traits loci (QTLs) from the root screening and the field trials were co-incident. QTLs for root rhizosheath size and root diameter explained the highest phenotypic variation in comparison to QTLs for other root traits. Shared QTLs were found between root diameter and grain yield, and total root length and PutE GY . A common major QTL for rhizosheath size and NDVI was mapped to the HvMATE gene marker on chromosome 4H. Collocations between major QTLs for NDVI and grain yield were detected on chromosomes 6H and 7H. When results from BIP and MET were combined, QTLs detected for grain yield were also those QTLs found for NDVI. QTLs qGY5H, qGY6H and qGY7Hb on 7H were robust QTLs in improving P efficiency. A selection of multiple loci may be needed to optimize the breeding outcomes due to the QTL x Environment interaction. We suggest that rhizosheath size alone is not a reliable trait to predict P efficiency or grain yield.

  18. Identification Of Barley Grain Mycoflora By Next Generation Sequencing And Videometer Multispectral Imaging

    DEFF Research Database (Denmark)

    Jørgensen, Johannes Ravn; Carstensen, Jens Michael; Søren, Knudsen

    Seeds of Barley (Hordeum vulgare) are infected by a high number of fungi, including pathogens such as Fusarium graminearum, F. culmorum, F. poae, F. avenaceum and Pyrenophora teres. Fusarium spp. is a widely distributed fungus causing yield reduction in a range of agricultural crops and many...... species in the genus produce mycotoxins responsible for serious quality deterioration. In malting barley, Fusarium also has a negative effect by causing gushing in beer. A number of barley seeds (app. 200) assumed to be infected by fungal from different origins and years of cultivation were tested by NGS...... sequencing the ITS (Internal Transcribed Spacer) region from total DNA. Approximately 2-4000 sequences were obtained from each seed and these were subsequently identified to species level in order to give an exact identification of fungal genera on each seed. The main fungal genera identified were Fusarium...

  19. Bioactive phytochemicals in barley.

    Science.gov (United States)

    Idehen, Emmanuel; Tang, Yao; Sang, Shengmin

    2017-01-01

    Epidemiological studies have consistently shown that regular consumption of whole grain barley reduces the risk of developing chronic diseases. The presence of barley fiber, especially β-glucan in whole grain barley, has been largely credited for these health benefits. However, it is now widely believed that the actions of the fiber component alone do not explain the observed health benefits associated with the consumption of whole grain barley. Whole grain barley also contains phytochemicals including phenolic acids, flavonoids, lignans, tocols, phytosterols, and folate. These phytochemicals exhibit strong antioxidant, antiproliferative, and cholesterol lowering abilities, which are potentially useful in lowering the risk of certain diseases. Therefore, the high concentration of phytochemicals in barley may be largely responsible for its health benefits. This paper reviews available information regarding barley phytochemicals and their potential to combat common nutrition-related diseases including cancer, cardiovascular disease, diabetes, and obesity. Copyright © 2016. Published by Elsevier B.V.

  20. Targeted modification of storage protein content resulting in improved amino acid composition of barley grain

    DEFF Research Database (Denmark)

    Sikdar, Md. Shafiqul Islam; Bowra, S; Schmidt, Daiana

    2016-01-01

    silencing technology directed towards C-hordein we obtained transgenic barley lines with up to 94.7 % reduction in the levels of C-hordein protein relative to the parental line. The composition of the prolamin fraction of the barley parental line cv. Golden Promise was resolved using SDS-PAGE...... electrophoresis, the protein band were excised and the proteins identified by quadrupole-time-of-flight mass spectrometry. Subsequent SDS-PAGE separation and analysis of the prolamin fraction of the transgenic lines revealed a reduction in the amounts of C-hordeins and increases in the content of other hordein...

  1. Investigation of Water Dynamics and the Effect of Evapotranspiration on Grain Yield of Rainfed Wheat and Barley under a Mediterranean Environment: A Modelling Approach.

    Science.gov (United States)

    Zhang, Kefeng; Bosch-Serra, Angela D; Boixadera, Jaume; Thompson, Andrew J

    2015-01-01

    Agro-hydrological models have increasingly become useful and powerful tools in optimizing water and fertilizer application, and in studying the environmental consequences. Accurate prediction of water dynamics in such models is essential for models to produce reasonable results. In this study, detailed simulations were performed for water dynamics of rainfed winter wheat and barley grown under a Mediterranean climate over a 10-year period. The model employed (Yang et al., 2009. J. Hydrol., 370, 177-190) uses easily available agronomic data, and takes into consideration of all key soil and plant processes in controlling water dynamics in the soil-crop system, including the dynamics of root growth. The water requirement for crop growth was calculated according to the FAO56, and the soil hydraulic properties were estimated using peto-transfer functions (PTFs) based on soil physical properties and soil organic matter content. Results show that the simulated values of soil water content at the depths of 15, 45 and 75 cm agreed with the measurements well with the root of the mean squared errors of 0.027 cm(3) cm(-3) and the model agreement index of 0.875. The simulated seasonal evapotranspiration (ET) ranged from 208 to 388 mm, and grain yield was found to correlate with the simulated seasonal ET in a linear manner within the studied ET range. The simulated rates of grain yield increase were 17.3 and 23.7 kg ha(-l) for every mm of water evapotranspired for wheat and barley, respectively. The good agreement of soil water content between measurement and simulation and the simulated relationships between grain yield and seasonal ET supported by the data in the literature indicates that the model performed well in modelling water dynamics for the studied soil-crop system, and therefore has the potential to be applied reliably and widely in precision agriculture. Finally, a two-staged approach using inverse modelling techniques to further improve model performance was

  2. Investigation of the indigenous fungal community populating barley grains: Secretomes and xylanolytic potential

    DEFF Research Database (Denmark)

    Sultan, Abida; Frisvad, Jens Christian; Andersen, Birgit

    2017-01-01

    on medium containing barley flour or wheat arabinoxylan as sole carbon source. Their secretomes and xylanase activities were analyzed using SDS-PAGE and enzyme assays and were found to vary according to species and carbon source. Secretomes were dominated by cell wall degrading enzymes with xylanases...

  3. In situ and in vitro ruminal starch degradation of grains from different rye, triticale and barley genotypes.

    Science.gov (United States)

    Krieg, J; Seifried, N; Steingass, H; Rodehutscord, M

    2017-10-01

    In recent years, advances in plant breeding were achieved, which potentially led to modified nutritional values of cereal grains. The present study was conducted in order to obtain a broad overview of ruminal digestion kinetics of rye, triticale and barley grains, and to highlight differences between the grain species. In total, 20 genotypes of each grain species were investigated using in situ and in vitro methods. Samples were ground (2 mm), weighed into polyester bags, and incubated in situ 1 to 48 h in three ruminally cannulated lactating dairy cows. The in vitro gas production of ground samples (1 mm) was measured according to the 'Hohenheim Gas Test', and cumulative gas production was recorded over different time spans for up to 72 h. There were significant differences (Pvalues exhibited the highest variation within species. The in vitro gas production rate was significantly higher (Pvalues, but was not reflected in the ED estimates. Therefore, the usage of mean values for the ED of DM and ST for each species appears reasonable. Estimated metabolisable energy concentrations (ME, MJ/kg DM) and the estimated digestibility of organic matter (dOM, %) were significantly lower (Pvalues were not significantly different (P=0.386 and 0.485).

  4. Genetic dissection of photoperiod response based on GWAS of pre-anthesis phase duration in spring barley.

    Directory of Open Access Journals (Sweden)

    Ahmad M Alqudah

    Full Text Available Heading time is a complex trait, and natural variation in photoperiod responses is a major factor controlling time to heading, adaptation and grain yield. In barley, previous heading time studies have been mainly conducted under field conditions to measure total days to heading. We followed a novel approach and studied the natural variation of time to heading in a world-wide spring barley collection (218 accessions, comprising of 95 photoperiod-sensitive (Ppd-H1 and 123 accessions with reduced photoperiod sensitivity (ppd-H1 to long-day (LD through dissecting pre-anthesis development into four major stages and sub-phases. The study was conducted under greenhouse (GH conditions (LD; 16/8 h; ∼20/∼16°C day/night. Genotyping was performed using a genome-wide high density 9K single nucleotide polymorphisms (SNPs chip which assayed 7842 SNPs. We used the barley physical map to identify candidate genes underlying genome-wide association scans (GWAS. GWAS for pre-anthesis stages/sub-phases in each photoperiod group provided great power for partitioning genetic effects on floral initiation and heading time. In addition to major genes known to regulate heading time under field conditions, several novel QTL with medium to high effects, including new QTL having major effects on developmental stages/sub-phases were found to be associated in this study. For example, highly associated SNPs tagged the physical regions around HvCO1 (barley CONSTANS1 and BFL (BARLEY FLORICAULA/LEAFY genes. Based upon our GWAS analysis, we propose a new genetic network model for each photoperiod group, which includes several newly identified genes, such as several HvCO-like genes, belonging to different heading time pathways in barley.

  5. A pathway-specific microarray analysis highlights the complex and co-ordinated transcriptional networks of the developing grain of field-grown barley

    DEFF Research Database (Denmark)

    Hansen, Michael; Friis, Carsten; Bowra, Steve

    2009-01-01

    The aim of the study was to describe the molecular and biochemical interactions associated with amino acid biosynthesis and storage protein accumulation in the developing grains of field-grown barley. Our strategy was to analyse the transcription of genes associated with the biosynthesis of stora...

  6. Barley Distillers Dried Grains with Solubles (DDGS) as Feedstock for Production of Acetone, Butanol and Ethanol

    NARCIS (Netherlands)

    Houweling-Tan, G.B.N.; Sperber, B.L.H.M.; Wal, van der H.; Bakker, R.R.C.; Lopez Contreras, A.M.

    2016-01-01

    Distillers dried grains with solubles (DDGS) represent important co-product from commercial yeast fermentations, including bioethanol, from grains. In view of the current expansion of the bioethanol fermentation process, with the concomitant increase in production of DDGS, alternative applications

  7. Genome-wide association mapping in winter barley for grain yield and culm cell wall polymer content using the high-throughput CoMPP technique.

    Directory of Open Access Journals (Sweden)

    Andrea Bellucci

    Full Text Available A collection of 112 winter barley varieties (Hordeum vulgare L. was grown in the field for two years (2008/09 and 2009/10 in northern Italy and grain and straw yields recorded. In the first year of the trial, a severe attack of barley yellow mosaic virus (BaYMV strongly influenced final performances with an average reduction of ~ 50% for grain and straw harvested in comparison to the second year. The genetic determination (GD for grain yield was 0.49 and 0.70, for the two years respectively, and for straw yield GD was low in 2009 (0.09 and higher in 2010 (0.29. Cell wall polymers in culms were quantified by means of the monoclonal antibodies LM6, LM11, JIM13 and BS-400-3 and the carbohydrate-binding module CBM3a using the high-throughput CoMPP technique. Of these, LM6, which detects arabinan components, showed a relatively high GD in both years and a significantly negative correlation with grain yield (GYLD. Overall, heritability (H2 was calculated for GYLD, LM6 and JIM and resulted to be 0.42, 0.32 and 0.20, respectively. A total of 4,976 SNPs from the 9K iSelect array were used in the study for the analysis of population structure, linkage disequilibrium (LD and genome-wide association study (GWAS. Marker-trait associations (MTA were analyzed for grain yield and cell wall determination by LM6 and JIM13 as these were the traits showing significant correlations between the years. A single QTL for GYLD containing three MTAs was found on chromosome 3H located close to the Hv-eIF4E gene, which is known to regulate resistance to BaYMV. Subsequently the QTL was shown to be tightly linked to rym4, a locus for resistance to the virus. GWAs on arabinans quantified by LM6 resulted in the identification of major QTLs closely located on 3H and hypotheses regarding putative candidate genes were formulated through the study of gene expression levels based on bioinformatics tools.

  8. A cathepsin F-like peptidase involved in barley grain protein mobilization, HvPap-1, is modulated by its own propeptide and by cystatins.

    Science.gov (United States)

    Cambra, Ines; Martinez, Manuel; Dáder, Beatriz; González-Melendi, Pablo; Gandullo, Jacinto; Santamaría, M Estrella; Diaz, Isabel

    2012-07-01

    Among the C1A cysteine proteases, the plant cathepsin F-like group has been poorly studied. This paper describes the molecular and functional characterization of the HvPap-1 cathepsin F-like protein from barley. This peptidase is N-glycosylated and has to be processed to become active by its own propeptide being an important modulator of the peptidase activity. The expression pattern of its mRNA and protein suggest that it is involved in different proteolytic processes in the barley plant. HvPap-1 peptidase has been purified in Escherichia coli and the recombinant protein is able to degrade different substrates, including barley grain proteins (hordeins, albumins, and globulins) stored in the barley endosperm. It has been localized in protein bodies and vesicles of the embryo and it is induced in aleurones by gibberellin treatment. These three features support the implication of HvPap-1 in storage protein mobilization during grain germination. In addition, a complex regulation exerted by the barley cystatins, which are cysteine protease inhibitors, and by its own propeptide, is also described.

  9. Grain protein concentration and harvestable protein under future climate conditions. A study of 108 spring barley accessions.

    Science.gov (United States)

    Ingvordsen, Cathrine H; Gislum, René; Jørgensen, Johannes R; Mikkelsen, Teis N; Stockmarr, Anders; Jørgensen, Rikke B

    2016-04-01

    In the present study a set of 108 spring barley (H. vulgare L.) accessions were cultivated under predicted future levels of temperature and [CO2] as single factors and in combination (IPCC, AR5, RCP8.5). Across all genotypes, elevated [CO2] (700 ppm day/night) slightly decreased protein concentration by 5%, while elevated temperature (+5 °C day/night) substantially increased protein concentration by 29%. The combined treatment increased protein concentration across accessions by 8%. This was an increase less than predicted from strictly additive effects of the individual treatments. Despite the increase in grain protein concentration, the decrease in grain yield at combined elevated temperature and elevated [CO2] resulted in 23% less harvestable protein. There was variation in the response of the 108 accessions, which might be exploited to at least maintain if not increase harvestable grain protein under future climate change conditions. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  10. Effect of β-glucanase and xylanase supplementation of barley- and rye-based diets on caecal microbiota of broiler chickens

    DEFF Research Database (Denmark)

    Josefiak, Damian; Rutkowski, A; Kaczmarek, S

    2010-01-01

    fragment-length polymorphism (T-RFLP)). 2. Plate counting revealed higher total numbers of anaerobic bacteria, lactic acid bacteria and yeasts in caecal contents of birds fed with rye-based diets than in birds fed with barley-based diets. 3. As assessed by FISH analysis, the most abundant bacterial groups......1. The aim was to investigate the effect of grain type (barley or rye) and exogenous enzymes (β-glucanase or xylanase) on the composition of chicken caecal microbiota as examined by classical culturing and molecular techniques (fluorescent in-situ hybridisation (FISH) and terminal-restriction......-RFLP profiles indicated that the caecal microbiota of birds receiving rye-based diets was more diverse than that of birds fed on barley-based diets. 5. Irrespective of the method applied, the results indicate that the cereal type as well as the exogenous enzyme supplementation influence the microbiota...

  11. Yield and grain quality of spring barley as affected by biomass formation at early growth stages

    Czech Academy of Sciences Publication Activity Database

    Křen, J.; Klem, Karel; Svobodová, I.; Míša, P.; Neudert, L.

    2014-01-01

    Roč. 60, č. 5 (2014), s. 221-227 ISSN 1214-1178 R&D Projects: GA MZe QI111A133 Keywords : Hordeum vulgare L * above-ground biomass * tillering * grain yield formation * grain protein content Subject RIV: EH - Ecology, Behaviour Impact factor: 1.226, year: 2014

  12. Quantitative trait loci for yield and grain plumpness relative to maturity in three populations of barley (Hordeum vulgare L. grown in a low rain-fall environment.

    Directory of Open Access Journals (Sweden)

    Bulti Tesso Obsa

    Full Text Available Identifying yield and grain plumpness QTL that are independent of developmental variation or phenology is of paramount importance for developing widely adapted and stable varieties through the application of marker assisted selection. The current study was designed to dissect the genetic basis of yield performance and grain plumpness in southern Australia using three doubled haploid (DH populations developed from crosses between adapted parents that are similar in maturity and overall plant development. Three interconnected genetic populations, Commander x Fleet (CF, Commander x WI4304 (CW, and Fleet x WI4304 (FW developed from crossing of Australian elite barley genotypes, were used to map QTL controlling yield and grain plumpness. QTL for grain plumpness and yield were analysed using genetic linkage maps made of genotyping-by-sequencing markers and major phenology genes, and field trials at three drought prone environments for two growing seasons. Seventeen QTL were detected for grain plumpness. Eighteen yield QTL explaining from 1.2% to 25.0% of the phenotypic variation were found across populations and environments. Significant QTL x environment interaction was observed for all grain plumpness and yield QTL, except QPlum.FW-4H.1 and QYld.FW-2H.1. Unlike previous yield QTL studies in barley, none of the major developmental genes, including Ppd-H1, Vrn-H1, Vrn-H2 and Vrn-H3, that drive barley adaption significantly affected grain plumpness and yield here. Twenty-two QTL controlled yield or grain plumpness independently of known maturity QTL or genes. Adjustment for maturity effects through co-variance analysis had no major effect on these yield QTL indicating that they control yield per se.

  13. Evaluation of the mature grain phytase candidate HvPAPhy_a gene in barley (Hordeum vulgare L.) using CRISPR/Cas9 and TALENs.

    Science.gov (United States)

    Holme, Inger B; Wendt, Toni; Gil-Humanes, Javier; Deleuran, Lise C; Starker, Colby G; Voytas, Daniel F; Brinch-Pedersen, Henrik

    2017-09-01

    In the present study, we utilized TALEN- and CRISPR/Cas9-induced mutations to analyze the promoter of the barley phytase gene HvPAPhy_a. The purpose of the study was dual, validation of the PAPhy_a enzyme as the main contributor of the mature grain phytase activity (MGPA), as well as validating the importance of a specific promoter region of the PAPhy_a gene which contains three overlapping cis-acting regulatory elements (GCN4, Skn1 and the RY-element) known to be involved in gene expression during grain filling. The results confirm that the barley PAPhy_a enzyme is the main contributor to the MGPA as grains of knock-out lines show very low MGPA. Additionally, the analysis of the HvPAPhy_a promoter region containing the GCN4/Skn1/RY motif highlights its importance for HvPAPhy_a expression as the MGPA in grains of plant lines with mutations within this motif is significantly reduced. Interestingly, lines with deletions located downstream of the motif show even lower MGPA levels, indicating that the GCN4/SKn1/RY motif is not the only element responsible for the level of PAPhy_a expression during grain maturation. Mutant grains with very low MPGA showed delayed germination as compared to grains of wild type barley. As grains with high levels of preformed phytases would provide more readily available phosphorous needed for a fast germination, this indicates that faster germination may be implicated in the positive selection of the ancient PAPhy gene duplication that lead to the creation of the PAPhy_a gene.

  14. Fermentation Results and Chemical Composition of Agricultural Distillates Obtained from Rye and Barley Grains and the Corresponding Malts as a Source of Amylolytic Enzymes and Starch

    Directory of Open Access Journals (Sweden)

    Maria Balcerek

    2016-10-01

    Full Text Available The objective of this study was to determine the efficiency of rye and barley starch hydrolysis in mashing processes using cereal malts as a source of amylolytic enzymes and starch, and to establish the volatile profile of the obtained agricultural distillates. In addition, the effects of the pretreatment method of unmalted cereal grains on the physicochemical composition of the prepared mashes, fermentation results, and the composition of the obtained distillates were investigated. The raw materials used were unmalted rye and barley grains, as well as the corresponding malts. All experiments were first performed on a semi-technical scale, and then verified under industrial conditions in a Polish distillery. The fermentable sugars present in sweet mashes mostly consisted of maltose, followed by glucose and maltotriose. Pressure-thermal treatment of unmalted cereals, and especially rye grains, resulted in higher ethanol content in mashes in comparison with samples subjected to pressureless liberation of starch. All agricultural distillates originating from mashes containing rye and barley grains and the corresponding malts were characterized by low concentrations of undesirable compounds, such as acetaldehyde and methanol. The distillates obtained under industrial conditions contained lower concentrations of higher alcohols (apart from 1-propanol than those obtained on a semi-technical scale.

  15. Fermentation Results and Chemical Composition of Agricultural Distillates Obtained from Rye and Barley Grains and the Corresponding Malts as a Source of Amylolytic Enzymes and Starch.

    Science.gov (United States)

    Balcerek, Maria; Pielech-Przybylska, Katarzyna; Dziekońska-Kubczak, Urszula; Patelski, Piotr; Strąk, Ewelina

    2016-10-01

    The objective of this study was to determine the efficiency of rye and barley starch hydrolysis in mashing processes using cereal malts as a source of amylolytic enzymes and starch, and to establish the volatile profile of the obtained agricultural distillates. In addition, the effects of the pretreatment method of unmalted cereal grains on the physicochemical composition of the prepared mashes, fermentation results, and the composition of the obtained distillates were investigated. The raw materials used were unmalted rye and barley grains, as well as the corresponding malts. All experiments were first performed on a semi-technical scale, and then verified under industrial conditions in a Polish distillery. The fermentable sugars present in sweet mashes mostly consisted of maltose, followed by glucose and maltotriose. Pressure-thermal treatment of unmalted cereals, and especially rye grains, resulted in higher ethanol content in mashes in comparison with samples subjected to pressureless liberation of starch. All agricultural distillates originating from mashes containing rye and barley grains and the corresponding malts were characterized by low concentrations of undesirable compounds, such as acetaldehyde and methanol. The distillates obtained under industrial conditions contained lower concentrations of higher alcohols (apart from 1-propanol) than those obtained on a semi-technical scale.

  16. Identification Of Barley Grain Mycoflora By Next Generation Sequencing And Videometer Multispectral Imaging

    DEFF Research Database (Denmark)

    Jørgensen, Johannes Ravn; Carstensen, Jens Michael; Søren, Knudsen

    , Pyrenophora, Epicoccum, Didymella, Alternaria, Bipolaris and Microdochium. The fungal composition and quantities on each seed varied significantly. Some were infected mainly by a single fungus and some were infected by multiple fungi. All seeds were prior to this evaluated by multispectral imaging...... on the dorsal and ventral sides by the VideometerLab multispectral imaging system (Videometer A/S, Hørsholm, Denmark). This system is an instrument equipped with 19 different light emitting diodes at wavelengths ranging from 375 to 970nm (ultraviolet, visual and lower wavelength of the near-infrared region...... for fungal contamination of barley on the fungal species level was investigated by comparing results from the next generation sequencing and multispectral imaging....

  17. Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools.

    Science.gov (United States)

    Sreenivasulu, Nese; Usadel, Björn; Winter, Andreas; Radchuk, Volodymyr; Scholz, Uwe; Stein, Nils; Weschke, Winfriede; Strickert, Marc; Close, Timothy J; Stitt, Mark; Graner, Andreas; Wobus, Ulrich

    2008-04-01

    Plant seeds prepare for germination already during seed maturation. We performed a detailed transcriptome analysis of barley (Hordeum vulgare) grain maturation, desiccation, and germination in two tissue fractions (starchy endosperm/aleurone and embryo/scutellum) using the Affymetrix Barley1 GeneChip. To aid data evaluation, Arabidopsis thaliana MapMan and PageMan tools were adapted to barley. The analyses allow a number of conclusions: (1) Cluster analysis revealed a smooth transition in transcription programs between late seed maturation and germination within embryo tissues, but not in the endosperm/aleurone. (2) More than 12,000 transcripts are stored in the embryo of dry barley grains, many of which are presumably activated during germination. (3) Transcriptional activation of storage reserve mobilization events occurs at an early stage of germination, well before radicle protrusion. (4) Key genes of gibberellin (GA) biosynthesis are already active during grain maturation at a time when abscisic acid peaks suggesting the formation of an endogenous store of GA in the aleurone. This GA probably acts later during germination in addition to newly synthesized GA. (5) Beside the well-known role of GA in gene activation during germination spatiotemporal expression data and cis-element searches in homologous rice promoters confirm an equally important gene-activating role of abscisic acid during this developmental period. The respective regulatory webs are linked to auxin and ethylene controlled networks. In summary, new bioinformatics PageMan and MapMan tools developed in barley have been successfully used to investigate in detail the transcriptome relationships between seed maturation and germination in an important crop plant.

  18. Investigation of Water Dynamics and the Effect of Evapotranspiration on Grain Yield of Rainfed Wheat and Barley under a Mediterranean Environment: A Modelling Approach.

    Directory of Open Access Journals (Sweden)

    Kefeng Zhang

    Full Text Available Agro-hydrological models have increasingly become useful and powerful tools in optimizing water and fertilizer application, and in studying the environmental consequences. Accurate prediction of water dynamics in such models is essential for models to produce reasonable results. In this study, detailed simulations were performed for water dynamics of rainfed winter wheat and barley grown under a Mediterranean climate over a 10-year period. The model employed (Yang et al., 2009. J. Hydrol., 370, 177-190 uses easily available agronomic data, and takes into consideration of all key soil and plant processes in controlling water dynamics in the soil-crop system, including the dynamics of root growth. The water requirement for crop growth was calculated according to the FAO56, and the soil hydraulic properties were estimated using peto-transfer functions (PTFs based on soil physical properties and soil organic matter content. Results show that the simulated values of soil water content at the depths of 15, 45 and 75 cm agreed with the measurements well with the root of the mean squared errors of 0.027 cm(3 cm(-3 and the model agreement index of 0.875. The simulated seasonal evapotranspiration (ET ranged from 208 to 388 mm, and grain yield was found to correlate with the simulated seasonal ET in a linear manner within the studied ET range. The simulated rates of grain yield increase were 17.3 and 23.7 kg ha(-l for every mm of water evapotranspired for wheat and barley, respectively. The good agreement of soil water content between measurement and simulation and the simulated relationships between grain yield and seasonal ET supported by the data in the literature indicates that the model performed well in modelling water dynamics for the studied soil-crop system, and therefore has the potential to be applied reliably and widely in precision agriculture. Finally, a two-staged approach using inverse modelling techniques to further improve model

  19. DIFFERENTIATION OF CROATIAN BARLEY VARIETIES BY GRADIENT GEL SDS-PAGE AND ISOELECTRIC FOCUSING OF DRY GRAINS AND GREEN MALT HORDEINS

    Directory of Open Access Journals (Sweden)

    Ivica Strelec

    2011-06-01

    Full Text Available Applicability of polyacrylamide gel electrophoresis and isoelectric focusing of hordeins for discrimination of six two-rowed winter barley varieties (Angora, Sladoran, Rodnik, Rex, Martin and Barun has been investigated. Hordeins extracted from dry grains and green malt of barley varieties were separated by sodium dodecyl sulphate-polyacrylamide gel electrophoresis in gradient gel of 8-18% T, and by isoelectric focusing in pH gradient of 3.5-9.5 and 5.5-8.5, respectively. In all separation experiments better resolution of proteins was achieved with dry grain extracts, than with malt extracts. Angora, Sladoran and Martin variety could be distinguished from other varieties by differences in hordein patterns obtained by gradient gel SDS-PAGE (8-18% T, and Angora, Sladoran, Martin and Rodnik by isoelectric focusing in pH gradient 5.5-8.5.

  20. HvPap-1 C1A Protease and HvCPI-2 Cystatin Contribute to Barley Grain Filling and Germination1

    Science.gov (United States)

    Velasco-Arroyo, Blanca; Cambra, Ines; Gonzalez-Melendi, Pablo; Lopez-Gonzalvez, Angeles; Garcia, Antonia

    2016-01-01

    Proteolysis is an essential process throughout the mobilization of storage proteins in barley (Hordeum vulgare) grains during germination. It involves numerous types of enzymes, with C1A Cys proteases the most abundant key players. Manipulation of the proteolytic machinery is a potential way to enhance grain yield and quality, and it could influence the mobilization of storage compounds along germination. Transgenic barley plants silencing or over-expressing the cathepsin F-like HvPap-1 Cys protease show differential accumulation of storage molecules such as starch, proteins, and free amino acids in the grain. It is particularly striking that the HvPap-1 artificial microRNA lines phenotype show a drastic delay in the grain germination process. Alterations to the proteolytic activities in the over-expressing and knock-down grains associated with changes in the level of expression of several C1A peptidases were also detected. Similarly, down-regulating cystatin Icy-2, one of the proteinaceous inhibitors of the cathepsin F-like protease, also has important effects on grain filling. However, the ultimate physiological influence of manipulating a peptidase or an inhibitor cannot be always predicted, since the plant tries to compensate the modified proteolytic effects by modulating the expression of some other peptidases or their inhibitors. PMID:26912343

  1. HvPap-1 C1A Protease and HvCPI-2 Cystatin Contribute to Barley Grain Filling and Germination.

    Science.gov (United States)

    Diaz-Mendoza, Mercedes; Dominguez-Figueroa, Jose D; Velasco-Arroyo, Blanca; Cambra, Ines; Gonzalez-Melendi, Pablo; Lopez-Gonzalvez, Angeles; Garcia, Antonia; Hensel, Goetz; Kumlehn, Jochen; Diaz, Isabel; Martinez, Manuel

    2016-04-01

    Proteolysis is an essential process throughout the mobilization of storage proteins in barley (Hordeum vulgare) grains during germination. It involves numerous types of enzymes, with C1A Cys proteases the most abundant key players. Manipulation of the proteolytic machinery is a potential way to enhance grain yield and quality, and it could influence the mobilization of storage compounds along germination. Transgenic barley plants silencing or over-expressing the cathepsin F-like HvPap-1 Cys protease show differential accumulation of storage molecules such as starch, proteins, and free amino acids in the grain. It is particularly striking that the HvPap-1 artificial microRNA lines phenotype show a drastic delay in the grain germination process. Alterations to the proteolytic activities in the over-expressing and knock-down grains associated with changes in the level of expression of several C1A peptidases were also detected. Similarly, down-regulating cystatin Icy-2, one of the proteinaceous inhibitors of the cathepsin F-like protease, also has important effects on grain filling. However, the ultimate physiological influence of manipulating a peptidase or an inhibitor cannot be always predicted, since the plant tries to compensate the modified proteolytic effects by modulating the expression of some other peptidases or their inhibitors. © 2016 American Society of Plant Biologists. All Rights Reserved.

  2. Response of Barley Double Haploid Lines to the Grain Yield and Morphological Traits under Water Deficit Stress Conditions

    Directory of Open Access Journals (Sweden)

    Maroof Khalily

    2017-04-01

    Full Text Available To study the relationships of grain yield and some of agro-morphological traits in 40 doubled haploid (DH lines along with parental and three check genotypes in a randomized complete block design with two replications under two water regimes (normal and stress were evaluated during 2011-2012 and 2012-2013 growing seasons. Combined analysis of variance showed significant difference for all the traits in terms of the year, water regimes, lines, and and line × year. Comparison of group means, between non-stress and stress conditions, showed that DH lines had the lowest reduction percentage for the number of grains per spike, thousand grain weight, grain yield and biological yield as opposed to check genotypes. The correlation between grain yield with biological yield, harvest index, thousand grain weight, and hectoliter of kernel weight in both conditions, were highly significant and positive. Based on stepwise regression the peduncle length, number of seeds per spike, thousand seed weight, and hectoliter of kernel weight had important effect on increasing seed yield. The result of path analysis showed that these traits had the highest direct effect on grain yield. Based on mean comparisons of morphological characters as well as STI and GMP indices it can be concluded that lines No.11, 13, 14, 24, 29, 30, 35 and 39 were distinguished to be desirable lines for grain yield and their related traits and also tolerant lines in terms of response to drought stress conditions.

  3. Exploring the Plant–Microbe Interface by Profiling the Surface-Associated Proteins of Barley Grains

    DEFF Research Database (Denmark)

    Sultan, Abida; Andersen, Birgit; Svensson, Birte

    2016-01-01

    Cereal grains are colonized by a microbial community that actively interacts with the plant via secretion of various enzymes, hormones, and metabolites. Microorganisms decompose plant tissues by a collection of depolymerizing enzymes, including β-1,4-xylanases, that are in turn inhibited by plant...

  4. Advances in the use of mutation induction for genetic improvement of barley and native grains in Peru

    International Nuclear Information System (INIS)

    Romero Loli, M.; Luz Gomez, P.; Jorge Jimenez, D.; Agripina Roldan, Ch.

    2001-01-01

    Barley seeds of two varieties were treated with several doses of gamma rays and sodium azide. Seeds of a quinoa (Chenopodium) variety were treated with three doses of gamma rays. Yield trials were conducted also for doubled haploid lines of barley derived from earlier mutagenic treatments. Some promising new barley mutant lines were identified in the yield trials. The results from the Chenopodium trials facilitate the determination of the optimum dose of gamma rays for the PRQ-22 variety. (author)

  5. Prediction of malting quality traits in barley based on genome-wide marker data to assess the potential of genomic selection.

    Science.gov (United States)

    Schmidt, Malthe; Kollers, Sonja; Maasberg-Prelle, Anja; Großer, Jörg; Schinkel, Burkhard; Tomerius, Alexandra; Graner, Andreas; Korzun, Viktor

    2016-02-01

    Genomic prediction of malting quality traits in barley shows the potential of applying genomic selection to improve selection for malting quality and speed up the breeding process. Genomic selection has been applied to various plant species, mostly for yield or yield-related traits such as grain dry matter yield or thousand kernel weight, and improvement of resistances against diseases. Quality traits have not been the main scope of analysis for genomic selection, but have rather been addressed by marker-assisted selection. In this study, the potential to apply genomic selection to twelve malting quality traits in two commercial breeding programs of spring and winter barley (Hordeum vulgare L.) was assessed. Phenotypic means were calculated combining multilocational field trial data from 3 or 4 years, depending on the trait investigated. Three to five locations were available in each of these years. Heritabilities for malting traits ranged between 0.50 and 0.98. Predictive abilities (PA), as derived from cross validation, ranged between 0.14 to 0.58 for spring barley and 0.40-0.80 for winter barley. Small training sets were shown to be sufficient to obtain useful PAs, possibly due to the narrow genetic base in this breeding material. Deployment of genomic selection in malting barley breeding clearly has the potential to reduce cost intensive phenotyping for quality traits, increase selection intensity and to shorten breeding cycles.

  6. Enrichment and Identification of the Most Abundant Zinc Binding Proteins in Developing Barley Grains by Zinc-IMAC Capture and Nano LC-MS/MS

    Directory of Open Access Journals (Sweden)

    Giuseppe Dionisio

    2018-01-01

    Full Text Available Background: Zinc accumulates in the embryo, aleurone, and subaleurone layers at different amounts in cereal grains. Our hypothesis is that zinc could be stored bound, not only to low MW metabolites/proteins, but also to high MW proteins as well. Methods: In order to identify the most abundant zinc binding proteins in different grain tissues, we microdissected barley grains into (1 seed coats; (2 aleurone/subaleurone; (3 embryo; and (4 endosperm. Initial screening for putative zinc binding proteins from the different tissue types was performed by fractionating proteins according to solubility (Osborne fractionation, and resolving those via Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis (SDS-PAGE followed by polyvinylidene fluoride (PVDF membrane blotting and dithizone staining. Selected protein fractions were subjected to Zn2+-immobilized metal ion affinity chromatography, and the captured proteins were identified using nanoscale liquid chromatography coupled to tandem mass spectrometry (nanoLC-MS/MS. Results: In the endosperm, the most abundant zinc binding proteins were the storage protein B-hordeins, gamma-, and D-hordeins, while in the embryo, 7S globulins storage proteins exhibited zinc binding. In the aleurone/subaleurone, zinc affinity captured proteins were late abundant embryogenesis proteins, dehydrins, many isoforms of non-specific lipid transfer proteins, and alpha amylase trypsin inhibitor. Conclusions: We have shown evidence that abundant barley grain proteins have been captured by Zn-IMAC, and their zinc binding properties in relationship to the possibility of zinc storage is discussed.

  7. Genetic variability in elite barley genotypes based on the agro-morphological characteristics evaluated under irrigated system

    Directory of Open Access Journals (Sweden)

    Renato Fernando Amabile

    Full Text Available ABSTRACT Recently, researches have shown that the Brazilian savannah has a great potential to supply the demand for barley grains. The purpose of this study was to assess the genetic variability in 39 elite barley (Hordeum vulgare L. genotypes based on the agro-morphological traits of a crop irrigated in the savannah system. An irrigation experiment in the design of complete randomized block with four replicates was conducted at Federal District - Brazil. The evaluated traits were: distance from the last knot to the rachis, distance from the flag leaf to rachis, spike length, number of grains by ear, flag leaf area, plant height, silking, lodging, grain yield, thousand-seed weight, protein content and grain commercial classification. After using analysis of variance the means were used to estimate the genetic dissimilarity among all genotypes pairs based on the Mahalanobis’ generalized distance. Cluster analysis using genetic distance matrix was performed having Unweighted Pair Group Method using Arithmetic Means method (UPGMA as the criteria. Highly significant differences were found among the genotypes for all traits evaluated. The high coefficient of genetic variation indicates the possibility of having genetic gains for all traits. The traits that most contributed to the variability were the flag leaf area and silking, while the protein content and lodging were the traits that contributed the least. Based on the cluster analysis, at least three major groups of similarity were found. There was a clustering trend of two and six-rowed materials. The most divergent genotypes were PFC 2005123, Antártica-1, Nandi and FM 404.

  8. How a 10-day heatwave impacts barley grain yield when superimposed onto future levels of temperature and CO2 as single and combined factors

    DEFF Research Database (Denmark)

    Heinz Ingvordsen, Cathrine; Lyngkjær, Michael F.; Peltonen-Sainio, Pirjo

    2018-01-01

    scenarios, 22 barley accessions were cultivated with elevated temperature (+5 °C) and CO2 (700 ppm) as single factors and in combination. The control treatment mimicked ambient Scandinavian early summer conditions (19/12 °C, day/night; 400 ppm CO2). Around flowering a 10-day heatwave of 33/28 °C (day....../night) was superimposed to all treatments. The lowest average grain yield was observed when the heatwave was superimposed onto the combined elevated temperature and CO2 treatment. Here the yield decreased by 42% compared to no heatwave and 52% compared to ambient conditions. When the heatwave was superimposed onto...... ambient conditions the average grain yield decreased by 37% compared to no heatwave. There was no significant difference between the relative grain yield decrease caused by the heatwave in the ambient and future climate scenarios. In contrast, the vegetative aboveground biomass increased upon heatwave...

  9. Physiological basis of barley yield under near optimal and stress conditions

    Directory of Open Access Journals (Sweden)

    Pržulj Novo

    2004-01-01

    Full Text Available Average barley yield fall below its potential due to incidence of stresses. Water stress is the main environmental factor limiting yield. The component a priori more sensitive to most stresses is the amount of radiation absorbed. The effect of stresses influence on the total amount of radiation absorbed by barley crop during its vegetation and the photosynthetic efficiency of radiation conversion. Growth inhibition is accompanied by reductions in leaf and cell wall extensibility. Grain yield under drought conditions is source limited. Supply of assimilates to the developing inflorescence plays a critical role in establishing final grain number and grain size. Grain weight is negatively affected by drought, high temperature, and any other factors that may reduce grain filling duration and grain filling rate. Awns and glaucousness confer better performance of barley under drought stress conditions. Barley responds with an increased accumulation of a number of proteins when subjected to different stress inducing cell dehydration. Screening techniques that are able to identify desirable genotypes based on the evaluation of physiological traits related to stress evasion and stress resistance maybe useful in breeding barley for resistance to stress, particularly drought stress. Crop management and breeding can reduce the incidence of stress on yield. The effect of these practices is sustained by an understanding of their physiology. In this paper the physiological basis of the processes determining barley yield and the incidence of stresses on photosynthetic metabolism that determine grain yield of barley is discussed. .

  10. MS based proteomic approaches for analysis of barley malt

    Czech Academy of Sciences Publication Activity Database

    Laštovičková, Markéta; Bobálová, Janette

    2012-01-01

    Roč. 56, č. 3 (2012), s. 519-530 ISSN 0733-5210 R&D Projects: GA ČR(CZ) GPP503/12/P395 Institutional research plan: CEZ:AV0Z40310501 Keywords : barley * malt * mass spectrometry Subject RIV: CB - Analytical Chemistry, Separation Impact factor: 2.088, year: 2012

  11. Growth performance, behaviour, forestomach development and meat quality of veal calves provided with barley grain or ground wheat straw for welfare purpose

    Directory of Open Access Journals (Sweden)

    Igino Andrighetto

    2010-01-01

    Full Text Available Two different feeding plans for veal calves were compared in the study: a traditional liquid diet supplemented with 250  g/calf/d of barley grain or with 250 g/calf/d of ground wheat straw. The two solid feeds had different chemical composi-  tion but a similar particle size obtained by grinding the straw in a mill with an 8-mm mesh screen. Twenty-four Polish  Friesian male calves were used in the study and they were housed in individual wooden stalls (0.83 x 1.80 m. The health  status of all the calves was satisfactory for the entire fattening period and no specific medical treatment was required  during the trial. Calves fed wheat straw showed a greater intake of solid feed (196 vs. 139 g/d; P  average daily gain (1288 vs. 1203 g/d; P  not affected by the type of solid feed and no milk refusal episodes were detected. The haemoglobin concentration was  similar in calves receiving the two feeding treatments despite the higher iron intake provided by the wheat straw through-  out the fattening period (2.12 vs. 1.15 g; P  calves’ metabolism. Feeding behaviour was affected by the provision of solid feeds. Eating and chewing were prolonged  in calves receiving ground wheat straw and the same solid feed reduced the frequency of oral stereotypies at the end of  the fattening period. At the slaughterhouse, no differences were observed between the feeding treatments as regards  carcass weight and dressing percentage. The calves fed ground wheat straw had a heavier weight of the empty omasum  (518 vs. 341 g; P  fed barley grain. The incidence of abomasal erosions, ulcers and scars was similar in both treatments; however the index  of abomasal damage, which considers the number and the seriousness of different type of lesions, was higher in calves  receiving barley grain. Therefore, the grinding of straw particles, as opposed to barley grain, can reduce the abrasive-  ness of roughage at the abomasum level. Visual evaluation of the

  12. Iron transport, deposition and bioavailability in the wheat and barley grain

    DEFF Research Database (Denmark)

    Borg, Søren; Brinch-Pedersen, Henrik; Tauris, Birgitte

    2009-01-01

    In recent years, the increasing knowledge on the molecular mechanisms underlying mineral uptake, transport, homeostasis and deposition within plants, has paved the way for a more targeted approach to improving the nutrient status of crop plants based on biotechnology. In the present paper we...... the nutritional status of poor populations. It is thus well documented that a number of plant components can act either as promoters or inhibitors of mineral uptake in the human digestive system (Frossard et al. J Sci Food Agric 80, 817-879 2000; Brinch-Pedersen et al. J Cereal Sci 46, 308-326 2007...

  13. Barley: From Brittle to Stable Harvest.

    Science.gov (United States)

    Haberer, Georg; Mayer, Klaus F X

    2015-07-30

    Selection and domestication of plants with genes that prevent grains from shattering in cereals was essential for human civilization's transition to agriculture-based societies. In this issue, Pourkheirandish et al. show that domestication of barley required evolution of a molecular system distinct from other grains, such as rice and maize, and reveal that present-day cultivars derive from two ancient domestication centers. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. Enrichment and identification of the most abundant zinc binding proteins in developing barley grains by Zinc-IMAC capture and nano LC-MS/MS

    DEFF Research Database (Denmark)

    Dionisio, Giuseppe; Uddin, Mohammad Nasir; Vincze, Eva

    2018-01-01

    , and the captured proteins were identified using nanoscale liquid chromatography coupled to tandem mass spectrometry (nanoLC-MS/MS). Results: In the endosperm, the most abundant zinc binding proteins were the storage protein B-hordeins, gamma-, and D-hordeins, while in the embryo, 7S globulins storage proteins...... exhibited zinc binding. In the aleurone/subaleurone, zinc affinity captured proteins were late abundant embryogenesis proteins, dehydrins, many isoforms of non-specific lipid transfer proteins, and alpha amylase trypsin inhibitor. Conclusions: We have shown evidence that abundant barley grain proteins have......Background: Zinc accumulates in the embryo, aleurone, and subaleurone layers at different amounts in cereal grains. Our hypothesis is that zinc could be stored bound, not only to low MW metabolites/proteins, but also to high MW proteins as well. Methods: In order to identify the most abundant zinc...

  15. Grain protein concentration and harvestable protein under future climate conditions. A study of 108 spring barley accessions

    DEFF Research Database (Denmark)

    Ingvordsen, Cathrine Heinz; Gislum, René; Jørgensen, Johannes Ravn

    2016-01-01

    In the present study a set of 108 spring barley (H. vulgare L.) accessions were cultivated under predicted future levels of temperature and [CO2] as single factors and in combination (IPCC, AR5, RCP8.5). Across all genotypes, elevated [CO2] (700 ppm day/night) slightly decreased protein concentra......In the present study a set of 108 spring barley (H. vulgare L.) accessions were cultivated under predicted future levels of temperature and [CO2] as single factors and in combination (IPCC, AR5, RCP8.5). Across all genotypes, elevated [CO2] (700 ppm day/night) slightly decreased protein...... protein under future climate change conditions....

  16. Barley metallothioneins

    DEFF Research Database (Denmark)

    Hegelund, Josefine Nymark; Schiller, Michaela; Kichey, Thomas

    2012-01-01

    and cadmium (Cd) in MT4, which was not the case for MT3. When complementary DNAs from barley MTs were expressed in Cu- or Cd-sensitive yeast mutants, MT3 provided a much stronger complementation than did MT4. We conclude that MT3 may play a housekeeping role in metal homeostasis, while MT4 may function in Zn...... storage in developing and mature grains. The localization of MT4 and its discrimination against Cd make it an ideal candidate for future biofortification strategies directed toward increasing food and feed Zn concentrations....

  17. Mass spectrometry-based analysis of whole-grain phytochemicals.

    Science.gov (United States)

    Koistinen, Ville Mikael; Hanhineva, Kati

    2017-05-24

    Whole grains are a rich source of several classes of phytochemicals, such as alkylresorcinols, benzoxazinoids, flavonoids, lignans, and phytosterols. A high intake of whole grains has been linked to a reduced risk of some major noncommunicable diseases, and it has been postulated that a complex mixture of phytochemicals works in synergy to generate beneficial health effects. Mass spectrometry, especially when coupled with liquid chromatography, is a widely used method for the analysis of phytochemicals owing to its high sensitivity and dynamic range. In this review, the current knowledge of the mass spectral properties of the most important classes of phytochemicals found in cereals of common wheat, barley, oats, and rye is discussed.

  18. Accumulation of mixed linkage (1¿3) (1¿4)-ß-D-glucan during grain filling in barley

    DEFF Research Database (Denmark)

    Seefeldt, Helene Fast; Blennow, Per Gunnar Andreas; Jespersen, Birthe P Møller

    2009-01-01

    18% BG (w/w) dry matter 30 days after flowering (DAF), seemingly compensating for a decreased synthesis of starch. The spectral information of the barley flour was compared to pure BG spectra and partial least squares regression (PLS) models were constructed for calibration to BG content. Informative...

  19. Anti-biofilm and sporicidal activity of peptides based on wheat puroindoline and barley hordoindoline proteins.

    Science.gov (United States)

    Shagaghi, Nadin; Alfred, Rebecca L; Clayton, Andrew H A; Palombo, Enzo A; Bhave, Mrinal

    2016-07-01

    The broad-spectrum activity of antimicrobial peptides (AMPs) and low probability of development of host resistance make them excellent candidates as novel bio-control agents. A number of AMPs are found to be cationic, and a small proportion of these are tryptophan-rich. The puroindolines (PIN) are small, basic proteins found in wheat grains with proposed roles in biotic defence of seeds and seedlings. Synthetic peptides based on their unique tryptophan-rich domain (TRD) display antimicrobial properties. Bacterial endospores and biofilms are highly resistant cells, with significant implications in both medical and food industries. In this study, the cationic PIN TRD-based peptides PuroA (FPVTWRWWKWWKG-NH2 ) and Pina-M (FSVTWRWWKWWKG-NH2 ) and the related barley hordoindoline (HIN) based Hina (FPVTWRWWTWWKG-NH2 ) were tested for effects on planktonic cells and biofilms of the common human pathogens including Pseudomonas aeruginosa, Listeria monocytogenes and the non-pathogenic Listeria innocua. All peptides showed significant bactericidal activity. Further, PuroA and Pina-M at 2 × MIC prevented initial biomass attachment by 85-90% and inhibited >90% of 6-h preformed biofilms of all three organisms. However Hina, with a substitution of Lys-9 with uncharged Thr, particularly inhibited Listeria biofilms. The PIN based peptides were also tested against vegetative cells and endospores of Bacillus subtilis. The results provided evidence that these tryptophan-rich peptides could kill B. subtilis even in sporulated state, reducing the number of viable spores by 4 log units. The treated spores appeared withered under scanning electron microscopy. The results establish the potential of these tryptophan-rich peptides in controlling persistent pathogens of relevance to food industries and human health. Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd. Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd.

  20. EFSA Panel on Dietetic Products, Nutrition and Allergies (NDA); Scientific Opinion on the substantiation of health claims related to oat and barley grain fibre and increase in faecal bulk (ID 819, 822) pursuant to Article 13(1) of Regulation (EC) No 1924/2006

    DEFF Research Database (Denmark)

    Tetens, Inge

    the evidence, the Panel took into account that the role of cereal grain fibre in increasing faecal bulk in humans is well established, that the mechanisms by which cereal grain fibre exerts the claimed effect are known, that oat fibre has a significant bulking effect in humans, and that a similar effect can...... be expected from barley grain fibre taking into account the similar composition of oat and barley fibre. The Panel concludes that a cause and effect relationship has been established between the consumption of oat and barley grain fibre and an increase in faecal bulk. The Panel considers that in order...

  1. Characterization of the Microchemical Structure of Seed Endosperm within a Cellular Dimension among Six Barley Varieties with Distinct Degradation Kinetics, Using Ultraspatially Resolved Synchrotron-Based Infrared Synchrotron-Based Infrared

    Energy Technology Data Exchange (ETDEWEB)

    Liu, N.; Yu, P

    2010-01-01

    information and the nutrient value of barley grain, although significant differences in biodegradation kinetics were observed. In conclusion, the studies demonstrated the potential of ultraspatially resolved synchrotron based technology (SFTIRM) to reveal the structural and chemical makeup within cellular and subcellular dimensions without destruction of the inherent structure of cereal grain tissue.

  2. Niobium-base grain refiner for aluminium

    International Nuclear Information System (INIS)

    Silva Pontes, P. da; Robert, M.H.; Cupini, N.L.

    1980-01-01

    A new chemical grain refiner for aluminium has been developed, using inoculation of a niobium-base compound. When a bath of molten aluminium is inoculated whith this refiner, an intermetallic aluminium-niobium compound is formed which acts as a powerful nucleant, producing extremely fine structure comparable to those obtained by means of the traditional grain refiner based on titanium and boron. It was found that the refinement of the structure depends upon the weight percentage of the new refiner inoculated as well as the time of holding the bath after inoculation and before pouring, but mainly on the inoculating temperature. (Author) [pt

  3. Multi-method research strategy for understanding changes in storage protein composition in developing barley grain to improve nutritional profile

    DEFF Research Database (Denmark)

    Kaczmarczyk, Agnieszka Ewa

    Barley (Hordeum vulgare L.) is cultivated in a range of diverse environments and is widely utilised as feed for animal and as malt in brewing. Nitrogen (N) is a key macronutrient whch directly increases plant growth and is used as a fertiliser to meet the demands for higher yield. However...... regimes. To reach the objective, integrated transcriptomics and proteomics analysis complemented with AAs profiling have been undertaken....

  4. Gibberellin-to-abscisic acid balances govern development and differentiation of the nucellar projection of barley grains

    Czech Academy of Sciences Publication Activity Database

    Weier, D.; Thiel, J.; Kohl, S.; Tarkowská, Danuše; Strnad, Miroslav; Schaarschmidt, S.; Weschke, W.; Weber, H.; Hause, B.

    2014-01-01

    Roč. 65, č. 18 (2014), s. 5291-5304 ISSN 0022-0957 R&D Projects: GA MŠk LK21306 Grant - others:GA MŠk(CZ) ED0007/01/01 Program:ED Institutional support: RVO:61389030 Keywords : Assimilate transfer * barley endosperm * gibberellin-to- abscisic acid balances Subject RIV: EF - Botanics Impact factor: 5.526, year: 2014

  5. Effect of dietary fiber of "Rihane" barley grains and azoxymethane on serum and liver lipid variables in Wistar rats.

    Science.gov (United States)

    Lahouar, Lamia; Ghrairi, Fatma; El Felah, Mouldi; Salem, Hichem Ben; Miled, Abdel Hedi; Hammami, Mohamed; Achour, Lotfi

    2011-03-01

    The aim of the present study is to evaluate the effects of diet enriched with dietary fiber of barley variety "Rihane" and azoxymethane on serum and liver lipid variables in male rats. Forty male rats were divided into four groups and fed on control diet or experimental diet that contained control enriched with dietary fiber of barley variety "Rihane". Animals were injected with saline (controls) or azoxymethane (20 mg/kg body weight s.c.) at 7 and 8 weeks of age. The experimental diet significantly decreased cholesterol level compared with the control diet. Rats fed with BR diet significantly increased the serum high-density lipoprotein (HDL) cholesterol and significantly decreased low-density lipoprotein (LDL) cholesterol concentrations. The experimental diet decreased the atherogenic index (p liver lipid, serum LDL and triglyceride concentrations, but it caused a significant reduction of HDL. Consequently, the ratio of HDL/TC decreased significantly compared with the control (p dietary fiber of barley variety "Rihane" could be effective in decreasing the atherogenic risk factors in rats whereas the use of the azoxymethane as colon-specific carcinogen substance altered the lipid metabolism.

  6. Improvement of Fermentation and Nutritive Quality of Straw-grass Silage by Inclusion of Wet Hulless-barley Distillers’ Grains in Tibet

    Science.gov (United States)

    Yuan, Xianjun; Yu, Chengqun; Shimojo, M.; Shao, Tao

    2012-01-01

    In order to develop methods that would enlarge the feed resources in Tibet, mixtures of hulless-barley straw and tall fescue were ensiled with four levels (0, 10%, 20%, and 30% of fresh weight) of wet hulless-barley distillers’ grains (WHDG). The silos were opened after 7, 14 or 30 d of ensiling, and the fermentation characteristics and nutritive quality of the silages were analyzed. WHDG addition significantly improved fermentation quality, as indicated by the faster decline of pH, rapid accumulation of lactic acid (LA) (p<0.05), and lower butyric acid content and ammonia-N/total N (p<0.05) as compared with the control. These results indicated that WHDG additions not only effectively inhibited the activity of aerobic bacteria, but also resulted in faster and greatly enhanced LA production and pH value decline, which restricted activity of undesirable bacteria, resulting in more residual water soluble carbohydrates (WSC) in the silages. The protein content of WHDG-containing silages were significantly higher (p<0.05) higher than that of the control. In conclusion, the addition of WHDG increased the fermentation and nutritive quality of straw-grass silage, and this effect was more marked when the inclusion rate of WHDG was greater than 20%. PMID:25049588

  7. The hydroxycinnamic acid content of barley and brewers' spent grain (BSG) and the potential to incorporate phenolic extracts of BSG as antioxidants into fruit beverages.

    Science.gov (United States)

    McCarthy, Aoife L; O'Callaghan, Yvonne C; Neugart, Susanne; Piggott, Charles O; Connolly, Alan; Jansen, Marcel A K; Krumbein, Angelika; Schreiner, Monika; FitzGerald, Richard J; O'Brien, Nora M

    2013-12-01

    The hydroxycinnamic acid (HA) content of starting barley for brewers' spent grains (BSG), whole BSG and phenolic extracts from BSG was measured using high performance liquid chromatography (HPLC) and correlated with antioxidant potential. The effect of BSG phenolic extracts on antioxidant activity of fruit beverages was also assessed (using the total phenolic content (TPC), 2,2-diphenyl-1-picrylhydrazyl (DPPH) and ferric reducing antioxidant power (FRAP) assays). The concentration of HA present in barley extract and BSG was in the order of ferulic acid (FA), p-coumaric acid (p-CA) derivatives, FA derivatives, p-CA, caffeic acid (CA) and CA derivatives. Results suggested that brewing and roasting decreased the HA content. Antioxidant activity was significantly (P<0.05) correlated with caffeic acid (R(2)=0.8309) and total HA (R(2)=0.3942) concentrations. Addition of extracts to fruit beverages resulted in a significant (P<0.05) increase in antioxidant activity of cranberry juice, measured by the FRAP assay. In vitro digestion significantly (P<0.05) reduced TPC, DPPH and FRAP activity of the fruit beverages. Copyright © 2013 Elsevier Ltd. All rights reserved.

  8. A comparison of hydroponic and soil-based screening methods to identify salt tolerance in the field in barley.

    Science.gov (United States)

    Tavakkoli, Ehsan; Fatehi, Foad; Rengasamy, Pichu; McDonald, Glenn K

    2012-06-01

    Success in breeding crops for yield and other quantitative traits depends on the use of methods to evaluate genotypes accurately under field conditions. Although many screening criteria have been suggested to distinguish between genotypes for their salt tolerance under controlled environmental conditions, there is a need to test these criteria in the field. In this study, the salt tolerance, ion concentrations, and accumulation of compatible solutes of genotypes of barley with a range of putative salt tolerance were investigated using three growing conditions (hydroponics, soil in pots, and natural saline field). Initially, 60 genotypes of barley were screened for their salt tolerance and uptake of Na(+), Cl(-), and K(+) at 150 mM NaCl and, based on this, a subset of 15 genotypes was selected for testing in pots and in the field. Expression of salt tolerance in saline solution culture was not a reliable indicator of the differences in salt tolerance between barley plants that were evident in saline soil-based comparisons. Significant correlations were observed in the rankings of genotypes on the basis of their grain yield production at a moderately saline field site and their relative shoot growth in pots at EC(e) 7.2 [Spearman's rank correlation (rs)=0.79] and EC(e) 15.3 (rs=0.82) and the crucial parameter of leaf Na(+) (rs=0.72) and Cl(-) (rs=0.82) concentrations at EC(e) 7.2 dS m(-1). This work has established screening procedures that correlated well with grain yield at sites with moderate levels of soil salinity. This study also showed that both salt exclusion and osmotic tolerance are involved in salt tolerance and that the relative importance of these traits may differ with the severity of the salt stress. In soil, ion exclusion tended to be more important at low to moderate levels of stress but osmotic stress became more important at higher stress levels. Salt exclusion coupled with a synthesis of organic solutes were shown to be important components of

  9. A comparison of hydroponic and soil-based screening methods to identify salt tolerance in the field in barley

    Science.gov (United States)

    Tavakkoli, Ehsan; Fatehi, Foad; Rengasamy, Pichu; McDonald, Glenn K.

    2012-01-01

    Success in breeding crops for yield and other quantitative traits depends on the use of methods to evaluate genotypes accurately under field conditions. Although many screening criteria have been suggested to distinguish between genotypes for their salt tolerance under controlled environmental conditions, there is a need to test these criteria in the field. In this study, the salt tolerance, ion concentrations, and accumulation of compatible solutes of genotypes of barley with a range of putative salt tolerance were investigated using three growing conditions (hydroponics, soil in pots, and natural saline field). Initially, 60 genotypes of barley were screened for their salt tolerance and uptake of Na+, Cl–, and K+ at 150 mM NaCl and, based on this, a subset of 15 genotypes was selected for testing in pots and in the field. Expression of salt tolerance in saline solution culture was not a reliable indicator of the differences in salt tolerance between barley plants that were evident in saline soil-based comparisons. Significant correlations were observed in the rankings of genotypes on the basis of their grain yield production at a moderately saline field site and their relative shoot growth in pots at ECe 7.2 [Spearman’s rank correlation (rs)=0.79] and ECe 15.3 (rs=0.82) and the crucial parameter of leaf Na+ (rs=0.72) and Cl– (rs=0.82) concentrations at ECe 7.2 dS m−1. This work has established screening procedures that correlated well with grain yield at sites with moderate levels of soil salinity. This study also showed that both salt exclusion and osmotic tolerance are involved in salt tolerance and that the relative importance of these traits may differ with the severity of the salt stress. In soil, ion exclusion tended to be more important at low to moderate levels of stress but osmotic stress became more important at higher stress levels. Salt exclusion coupled with a synthesis of organic solutes were shown to be important components of salt

  10. Antisense-mediated suppression of C-hordein biosynthesis in the barley grain results in correlated changes in the transcriptome, protein profile, and amino acid composition

    DEFF Research Database (Denmark)

    Hansen, Mette; Lange, Marianne; Friis, Carsten

    2007-01-01

    Antisense- or RNAi-mediated suppression of the biosynthesis of nutritionally inferior storage proteins is a promising strategy for improving the amino acid profile of seeds. However, the potential pleiotropic effects of this on interconnected pathways and the agronomic quality traits need...... to be addressed. In the current study, a transcriptomic analysis of an antisense C-hordein line of barley was performed, using a grain-specific cDNA array. The C-hordein antisense line is characterized by marked changes in storage protein and amino acid profiles, while the seed weight is within the normal range...... and no external morphological irregularities were observed. The results of the transcriptome analysis showed excellent correlation with data on changes in the relative proportions of storage proteins and amino acid composition. The antisense line had a lower C-hordein level and down-regulated transcript encoding...

  11. Genetic diversity and structure analysis based on hordein protein polymorphism in barley landrace populations from jordan

    International Nuclear Information System (INIS)

    Baloch, A.W.; Ali, M.; Baloch, A.M.; Mangan, B.U.N.; Song, W

    2014-01-01

    Jordan is unanimously considered to be one of the centers of genetic diversity for barley, where wild and landraces of barley has been grown under different climatic conditions. The genetic diversity and genetic structure based on hordein polymorphism was assessed in 90 different accessions collected from four different sites of Jordan. A-PAGE was used to reveal hordein polymorphism among the genotypes. A total of 29 distinct bands were identified, out of them 9 bands were distinguished for D, 11 for C, and 9 for the B hordein regions. The observed genetic similarity was an exceptionally high between the populations than expected, which is probably due to high gene flow estimated between them. The genetic diversity parameters were not differ largely among the populations, indicating that local selection of a particular site did not play a key role in shaping genetic diversity. Analysis of molecular variance (AMOVA) revealed significant population structure when accessions were structured according to population site. There was 94% of hordein variation resided within the populations and only 8% present among the populations. Both Bayesian and Principale Coordinate Analysis (PCoA) concordantly demonstrated admixture genotypes of the landraces barley populations. Consequently, none of the population found to be clustered separately according to its population site. It is concluded that this approach can be useful to explore the germplasm for genetic diversity but perhaps is not suitable for determining phylogenic relations in barley. (author)

  12. Analyses of Spring Barley Evapotranspiration Rates Based on Gradient Measurements and Dual Crop Coefficient Model

    Directory of Open Access Journals (Sweden)

    Gabriela Pozníková

    2014-01-01

    Full Text Available The yield of agricultural crops depends on water availability to a great extent. According some projections, the likelihood of stress caused by drought is increasing in future climates expected for the Central Europe. Therefore, in order to manage agro-ecosystems properly, it is necessary to know water demand of particular crops as precisely as possible. Evapotranspiration (ET is the main part of water balance which takes the water from agro-ecosystems away. The ET consists of evaporation from the soil (E and transpiration (T through the stomata of plants. In this study, we investigated ET of spring barley 1-ha field (Domanínek, Czech Republic measured by Bowen ratio/energy balance method during growing period 2013 (May 8 to July 31. Special focus was dedicated to comparison of barley ET with the reference grass ETo calculated according FAO-56 model, i.e. the determination of barley crop coefficient (Kc. This crop coefficient was subsequently separated into soil evaporation (Ke and transpiration fraction (Kcb by adjusting soil and phenological parameters of dual crop coefficient model to minimize the root mean square error between measured and modelled ET. The resulting Kcb of barley was 0.98 during mid-growing period and 0.05 during initial and end periods. According to FAO-56, typical values are 1.10 and 0.15 for Kcb mid and Kcb end, respectively. Modelled and measured ET show satisfactory agreement with root mean square error equal 0.41 mm. Based on the sums of ET and E for the whole growing season of the spring barley, ET partitioning by FAO-56 dual crop coefficient model resulted in E/ET ratio being 0.24.

  13. The inter-relationship between processing-induced molecular structure features and metabolic and digestive characteristics in hulled and hulless barley (Hordeum vulgare) grains with altered carbohydrate traits.

    Science.gov (United States)

    Yan, Xiaogang; Zhang, Fangyu; Yu, Peiqiang

    2017-03-01

    The present study aimed to determine the microwave irradiation (MIR)-induced changes in protein molecular structures in barley (Hordeum vulgare) grains in relation to the truly absorbable protein nutrient supply to ruminant livestock systems. Samples from hulled and hulless cultivars of barley, harvested in consecutive years from four replicate plots, were evaluated. The samples were either kept raw or were irradiated with microwaves for 3 min (MIR3) or 5 min (MIR5). The truly absorbable protein nutrient supply to ruminant livestock systems was evaluated using the DVE/OEB system (DVE, truly absorbed protein in the small intestine; OEB, degraded protein balance). Molecular structure changes as a result of processing were revealed by vibrational molecular spectroscopy in the mid-infrared electromagnetic radiation region. Compared to the raw samples, MIR processing decreased (P < 0.05) the truly absorbable microbial crude protein and increased (P < 0.05) the truly absorbable rumen undegraded protein and endogenous protein supply without affecting the total truly absorbed protein supply to the small intestine (DVE) and degraded protein balance (OEB) in ruminant livestock systems. Changes in protein molecular structure (spectral intensities) were highly correlated with the changes in the truly absorbed protein nutrient supply to ruminant livestock systems. The results of the present study show that the changes in protein molecular structure as a result of MIR feed processing were associated with the truly absorbed protein supply to ruminant livestock systems. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  14. Genetic variability of hull-less barley accessions based on molecular and quantitative data

    Directory of Open Access Journals (Sweden)

    Ricardo Meneses Sayd

    2015-02-01

    Full Text Available The objective of this work was to characterize and quantify the genetic, molecular, and agronomic variability of hull-less barley genotypes, for the selection of parents and identification of genotypes adapted to the irrigated production system in the Brazilian Cerrado. Eighteen hull-less barley accessions were evaluated, and three covered barley accessions served as reference. The characterization was based on 157 RAPD molecular markers and ten agronomic traits. Genetic distance matrices were obtained based on molecular markers and quantitative traits. Graphic grouping and dispersion analyses were performed. Genetic, molecular, and agronomic variability was high among genotypes. Ethiopian accessions were genetically more similar, and the Brazilian ones were genetically more distant. For agronomic traits, two more consistent groupings were obtained, one with the most two-rowed materials, and the other with six-rowed materials. The more diverging materials were the two-rowed CI 13453, CN Cerrado 5, CN Cerrado 1, and CN Cerrado 2. The PI 356466, CN Cerrado 1, PI 370799, and CI 13453 genotypes show agronomic traits of interest and, as genetically different genotypes, they are indicated for crossing, in breeding programs.

  15. Integrating statistical and ecophysiological analysis of genotype by environment interaction for grain filling of barley in Mediterranean areas. II. Grain growth

    NARCIS (Netherlands)

    Voltas, J.; Eeuwijk, van F.A.; Araus, J.L.; Romagosa, I.

    1999-01-01

    In Mediterranean areas, grain growth of temperate cereals often progresses under the harmful influence of drought and high temperature. Genotypic responses are mediated by the specific occurrence of these constraints, thus causing genotype by environment (G × E) interaction. Field experiments were

  16. A constitutive model of nanocrystalline metals based on competing grain boundary and grain interior deformation mechanisms

    KAUST Repository

    Gurses, Ercan

    2011-12-01

    In this work, a viscoplastic constitutive model for nanocrystalline metals is presented. The model is based on competing grain boundary and grain interior deformation mechanisms. In particular, inelastic deformations caused by grain boundary diffusion, grain boundary sliding and dislocation activities are considered. Effects of pressure on the grain boundary diffusion and sliding mechanisms are taken into account. Furthermore, the influence of grain size distribution on macroscopic response is studied. The model is shown to capture the fundamental mechanical characteristics of nanocrystalline metals. These include grain size dependence of the strength, i.e., both the traditional and the inverse Hall-Petch effects, the tension-compression asymmetry and the enhanced rate sensitivity. © 2011 Elsevier B.V. All rights reserved.

  17. WORLD GRAIN TRADE

    Directory of Open Access Journals (Sweden)

    Emilia Mary Bălan

    2017-04-01

    Full Text Available Grain is part of agricultural commodities and is of utmost importance for world agriculture,since it is the essential element of food and animal feed. Against this background, grain trade among countries of the world is dynamic and represents about 10% of global trade in food products.This article examines global grain trade both in terms of quantitative and qualitative developments, and highlights the most important competitor countries in this sector. It also details the patterns of grain trade for the world's main exporters and importers of such commodities.Two distinct sections of the research relate to the evolution of the primary grain quotations(wheat, corn, barley, rice and sorghum at the most representative international agricultural commodities markets (Chicago Board of Trade, based on a comprehensive statistical analysis, and the short-term forecasts for global grain trade, respectively.

  18. Biochemical composition and nutritional evaluation of barley rihane ...

    African Journals Online (AJOL)

    glucan; bioactive compounds; functional food. Abbreviations: BR, Barley Rihane; LDL, low density lipoprotein; HDL, high density lipoprotein; AOM, azoxymethane; TBV, Tunisian barley varieties; TGW, thousand grain weight; SW, weight specific; TDF ...

  19. Differential gene expression for suicide-substrate serine proteinase inhibitors (serpins) in vegetative and grain tissues of barley

    DEFF Research Database (Denmark)

    Roberts, T.H.; Marttila, S.; Rasmussen, S.K.

    2003-01-01

    Proteins of the serpin superfamily (similar to43 kDa) from mature cereal grains are in vitro suicide-substrate inhibitors of specific mammalian serine proteinases of the chymotrypsin family. However, unlike the 'standard-mechanism' serine proteinase inhibitors (<25 kDa), the biological functions ...... their irreversible inhibitory mechanism in the inhibition of exogenous proteinases capable of breaking down seed storage proteins, and in the defence of specific cell types in vegetative tissues....

  20. Grain Refinement of Permanent Mold Cast Copper Base Alloys

    Energy Technology Data Exchange (ETDEWEB)

    M.Sadayappan; J.P.Thomson; M.Elboujdaini; G.Ping Gu; M. Sahoo

    2005-04-01

    Grain refinement is a well established process for many cast and wrought alloys. The mechanical properties of various alloys could be enhanced by reducing the grain size. Refinement is also known to improve casting characteristics such as fluidity and hot tearing. Grain refinement of copper-base alloys is not widely used, especially in sand casting process. However, in permanent mold casting of copper alloys it is now common to use grain refinement to counteract the problem of severe hot tearing which also improves the pressure tightness of plumbing components. The mechanism of grain refinement in copper-base alloys is not well understood. The issues to be studied include the effect of minor alloy additions on the microstructure, their interaction with the grain refiner, effect of cooling rate, and loss of grain refinement (fading). In this investigation, efforts were made to explore and understand grain refinement of copper alloys, especially in permanent mold casting conditions.

  1. Effect of substituting soybean meal and canola cake with grain-based dried distillers grains with solubles as a protein source on feed intake, milk production, and milk quality in dairy cows

    DEFF Research Database (Denmark)

    Gaillard, Charlotte; Sørensen, Martin Tang; Vestergaard, Mogens

    2017-01-01

    The growth of the bioethanol industry is leading to an increase in the production of coproducts such as dried distillers grains with solubles (DDGS). Both corn-based DDGS and grain-based DDGS (gDDGS; defined as originating from grain sources such as barley, wheat, triticale, or a mix, excluding...... corn) appear to be relevant sources of feed and protein for dairy cows. To date, most of the studies investigating DDGS have been performed with corn-based DDGS. The objectives of this study were to determine the effects of the proportion of gDDGS in the diet on feed intake, milk production, and milk...... may consist of gDDGS without negatively affecting milk production, milk quality, or milk taste. When gDDGS represents 23% of dietary DM, milk production is reduced by 1.6 kg/d, whereas energy-corrected milk production is numerically reduced by 1 kg....

  2. Regulation of cell cycle activity in the embryo of barley seeds during germination as related to grain hydration.

    Science.gov (United States)

    Gendreau, Emmanuel; Romaniello, Sébastien; Barad, Sophie; Leymarie, Juliette; Benech-Arnold, Roberto; Corbineau, Françoise

    2008-01-01

    Various studies indicate that cell division is a post-germination phenomenon, with radicle protrusion occurring by cell elongation, while others demonstrate that induction of the cell cycle occurs in osmo-conditioned seeds prior to radicle growth. The aim of the present work was to investigate the occurrence of the cell cycle during germination as related to grain hydration, using: (i) a flow cytometry technique to estimate the percentage of cell nuclei in G(1) and G(2) phases of the cell cycle; and (ii) reverse transcription-PCR (RT-PCR) in order to characterize the expression of the genes encoding cyclin-dependent kinases (CDKA1, CDKB1, and CDKD1) and cyclins (CYCA3, CYCB1, and CYCD4), the main genes involved in the cell cycle and its regulation. Radicle tips of embryos were isolated from seeds placed for various times on water at 30 degrees C and from grains partially hydrated at moisture contents ranging from 11% to 51% fresh weight (FW), which prevent radicle elongation. Abscisic acid (ABA) contents of the embryos during seed germination at 30 degrees C and after 48 h of partial hydration were also measured. In dry embryos, cells are mostly arrested in the G(1) phase of the cell cycle (82%), the remaining cells being in the G(2) phase, and the ABA content of the embryo was 432.7 ng g(-1) dry weight (DW). Seed imbibition was associated with a sharp decrease in ABA content as early as 5 h, while the cell cycle reactivation was a late process taking place approximately 4-6 h prior to radicle protrusion. Hydration of seeds resulted in a decrease in embryo ABA content, but it remained at a high level (207-273 ng g(-1) DW) even after 48 h at 0.41-0.51 g H2O g(-1) FW. The cell population of the radicle tips in the G(2) phase of the cell cycle, i.e. 4C nuclei, increased from 9% up to 34% at a moisture content of 51% FW. In dry seeds, CDKA1 and CDKD1 mRNAs were present at low levels, but transcripts of CDKB1, CYCA3, CYCB1, and CYCD4 were not detected. Radicle

  3. Alanine aminotransferase controls seed dormancy in barley.

    Science.gov (United States)

    Sato, Kazuhiro; Yamane, Miki; Yamaji, Nami; Kanamori, Hiroyuki; Tagiri, Akemi; Schwerdt, Julian G; Fincher, Geoffrey B; Matsumoto, Takashi; Takeda, Kazuyoshi; Komatsuda, Takao

    2016-05-18

    Dormancy allows wild barley grains to survive dry summers in the Near East. After domestication, barley was selected for shorter dormancy periods. Here we isolate the major seed dormancy gene qsd1 from wild barley, which encodes an alanine aminotransferase (AlaAT). The seed dormancy gene is expressed specifically in the embryo. The AlaAT isoenzymes encoded by the long and short dormancy alleles differ in a single amino acid residue. The reduced dormancy allele Qsd1 evolved from barleys that were first domesticated in the southern Levant and had the long dormancy qsd1 allele that can be traced back to wild barleys. The reduced dormancy mutation likely contributed to the enhanced performance of barley in industrial applications such as beer and whisky production, which involve controlled germination. In contrast, the long dormancy allele might be used to control pre-harvest sprouting in higher rainfall areas to enhance global adaptation of barley.

  4. Nitrogen metabolism and route of excretion in beef feedlot cattle fed barley-based backgrounding diets varying in protein concentration and rumen degradability.

    Science.gov (United States)

    Koenig, K M; Beauchemin, K A

    2013-05-01

    The objectives of the study were to characterize the effects of CP concentration and ruminal degradability of barley-based backgrounding diets on route and chemical form of N excretion, ruminal fermentation, microbial protein synthesis, and nutrient digestion in beef cattle. Four Angus heifers (479 ± 14.6 kg average BW) with ruminal and duodenal cannulas were used in an experiment designed as a 4 × 4 Latin square. The basal diet consisted of 54% barley silage and 46% barley grain-based concentrate (DM basis). Dietary treatments included the basal diet with no added protein (12% CP) or diets formulated to contain 14% CP by supplementation with urea (UREA), urea and canola meal (UREA+CM), or urea, corn gluten meal, and xylose-treated soybean meal (UREA+CGM+xSBM). The amount of feed offered was restricted to 95% of ad libitum intake. There was no effect of the diets on DMI (P = 0.38), and therefore, N intake was less (P 0.10) on the amount of urine N output. Urine N output was 38.9 and 45.1 ± 5.50% of N intake in heifers fed the 12% CP and 14% CP diets (P ruminal NH3-N but had no effect on ruminal peptide N (P = 0.62) and free AA N (P = 0.18) concentration, the flow of microbial (P = 0.34) and feed (P = 0.55) N, and ruminal (starch, P = 0.11; NDF, P = 0.78) and total tract nutrient digestibility (OM, P = 0.21; starch, P = 0.16). Supplementation of barley-based backgrounding diets containing 12% CP with NPN alone or combined with ruminally degradable and undegradable true protein to attain 14% CP had no effect on fecal N output, but urine N and urea N increased irrespective of protein source. In addition, the ruminal degradability of the protein sources did not influence the composition of protein flowing to the intestine and site and extent of nutrient digestibility.

  5. Determination of basal ileal endogenous losses and standardized ileal digestibility of amino acids in barley fed to growing pigs

    DEFF Research Database (Denmark)

    Spindler, Hanna Katharina; Mosenthin, Rainer; Rosenfelder, Pia

    2016-01-01

    digestible content (cAID) and total crude protein (CP) and AA can be considered as alternative approach to obtain more accurate values for IAAend and SID of AA in cereal grains.MethodsEight hulled barley genotypes were used, with barley being the only source of CP and AA in the assay diets. The diets......BackgroundBasal ileal endogenous amino acid (AA) losses (IAAend) and standardized ileal digestibility (SID) values of cereal grains, such as barley, are apparently underestimated when determined according to the nitrogen (N)-free method. Regression analysis between the dietary apparent ileal...... to tabulated values. Moreover, these SID values were greater than those reported in literature, based on correction of apparent ileal digestibility (AID) of CP and AA for their IAAend values. Summarized, the results of the present regression analysis indicate greater IAAend in barley-based diets compared...

  6. Understanding Solidification Based Grain Refinement in Steels

    Science.gov (United States)

    2014-12-18

    Alumina Brick 42.2 52.6 1.4 2.3 0.2 0.3 Table 1 Composition of refractory materials The 99% alumina and 90% alumina samples showed no signs of reaction...dislocation can travel through a metal crystal before being blocked by a grain boundary. Since the dislocation is impeded sooner, the material cannot... thermomechanical methods for decreasing grain size. Steel castings are produced by making a mold using a pattern in the shape of the part. The pattern is removed

  7. Fusarium infection and trichothecenes in barley and its comparison with wheat

    NARCIS (Netherlands)

    Janssen, E.M.; Liu, C.; Fels, van der H.J.

    2018-01-01

    Barley is a small-grain cereal that can be infected by Fusarium spp. resulting in reduced quality and safety of harvested barley (products). Barley and other small-grain cereals are commonly studied together for Fusarium infection and related mycotoxin contamination, since the infection and its

  8. The iron-regulated transporter 1 plays an essential role in uptake, translocation and grain-loading of manganese, but not iron, in barley

    DEFF Research Database (Denmark)

    Long, Lizhi; Persson, Daniel Olaf; Duan, Fengying

    2018-01-01

    ) for Mn uptake and translocation in barley plants. We employed an RNAi approach to reduce HvIRT1 expression to 5% of the wild-type level. This enabled characterization of the functional role of HvIRT1 by use of advanced imaging and phenotyping techniques applied to plants growing in hydroponics or soils...

  9. Classification and Processing Optimization of Barley Milk Production Using NIR Spectroscopy, Particle Size, and Total Dissolved Solids Analysis

    Directory of Open Access Journals (Sweden)

    Jasenka Gajdoš Kljusurić

    2015-01-01

    Full Text Available Barley is a grain whose consumption has a significant nutritional benefit for human health as a very good source of dietary fibre, minerals, vitamins, and phenolic and phytic acids. Nowadays, it is more and more often used in the production of plant milk, which is used to replace cow milk in the diet by an increasing number of consumers. The aim of the study was to classify barley milk and determine the optimal processing conditions in barley milk production based on NIR spectra, particle size, and total dissolved solids analysis. Standard recipe for barley milk was used without added additives. Barley grain was ground and mixed in a blender for 15, 30, 45, and 60 seconds. The samples were filtered and particle size of the grains was determined by laser diffraction particle sizing. The plant milk was also analysed using near infrared spectroscopy (NIRS, in the range from 904 to 1699 nm. Furthermore, conductivity of each sample was determined and microphotographs were taken in order to identify the structure of fat globules and particles in the barley milk. NIR spectra, particle size distribution, and conductivity results all point to 45 seconds as the optimal blending time, since further blending results in the saturation of the samples.

  10. Wheat- and barley-based diets with or without additives influence broiler chicken performance, nutrient digestibility and intestinal microflora.

    Science.gov (United States)

    Rodríguez, María Luisa; Rebolé, Almudena; Velasco, Susana; Ortiz, Luis T; Treviño, Jesús; Alzueta, Carmen

    2012-01-15

    To our knowledge, there is scant literature on comparative broiler response to cereal diets high in soluble non-starch polysaccharides without or with enzyme, prebiotic, probiotic or synbiotic supplementation. In the present study, the effects of a wheat- and barley-based diet with or without supplemental xylanase plus β-glucanase, inulin, Enterococcus faecium or inulin plus Enterococcus faecium, on bird performance, digesta viscosity, nutrient digestibility and intestinal microflora were compared to a maize-based diet. In comparison to a maize-based diet, the wheat- and barley-based diet reduced (P 0.05) by dietary inclusion of the additives used, with the exception that exogenous enzyme improved (P Enzyme and Enterococcus faecium supplementation increased intestinal lactic acid bacteria, whereas inulin addition reduced the number of E. coli (P Addition of inulin-Enterococcus faecium decreased E. coli and increased bifidobacteria numbers in the caeca. Enzyme supplementation to a wheat- and barley-based diet significantly improved the apparent digestibility of dietary fat. All four additives had a beneficial effect on the intestinal microflora of broilers. Copyright © 2011 Society of Chemical Industry.

  11. Performance and ultrasound measurements of beef cattle fed diets based on whole corn or oats grains

    Directory of Open Access Journals (Sweden)

    Hugo M Arelovich

    2013-09-01

    Full Text Available This study intended to contrast dietary effects of whole grain oats versus corn included in rations with moderate roughage content on animal performance, beef ultrasound measurements, rumen and blood parameters. Ten Aberdeen Angus steers (203 kg in individual pens were fed twice daily on either whole oats (OD or corn (CD based diets. Measurements were: DM intake (DMI, average daily gain (ADG, feed to gain ratio (F/G; back fat (BF and rib eye area (RA; blood parameters. Four cannulated steers were used to study rumen pH, NH3-N and grain degradability. Rations dietary components were 55% grain, 30.1% barley straw, and 10.6% whole soybeans. Despite calculated higher ME supply (P = 0.0887 no differences were found for DMI, ADG, or F/G. Metabolizable protein intake (19.4% was larger and degradable protein intake (43.3% smaller for CD compared with OD (P < 0.01. The growth rate (cm² d-1 for RA was 40% grater for OD, but larger BF deposition (P = 0.0787 was found for CD. Blood Mg was higher for OD (p = 0.0564, nevertheless other blood parameters remained unaffected. Rumen pH and NH3-N were not influenced by diet, variations were only observed within time periods. Rumen pH decreased linearly from 7.05 to 6.13 and 7.11 to 6.37 for OD and CD respectively (P < 0.05. Minimum NH3-N concentrations (mg dL-1 were reached 12 and 18 h after morning meal for OD (7.10 and CD (5.82 respectively. Rumen degradation was larger for oats than corn. Whole oats rather than corn fed up to 55% of total DM seems to improve protein deposition, without significant changes in animal performance, rumen environment or blood parameters.

  12. HvDep1 Is a Positive Regulator of Culm Elongation and Grain Size in Barley and Impacts Yield in an Environment-Dependent Manner.

    Directory of Open Access Journals (Sweden)

    Toni Wendt

    Full Text Available Heterotrimeric G proteins are intracellular membrane-attached signal transducers involved in various cellular processes in both plants and animals. They consist of three subunits denoted as α, β and γ. The γ-subunits of the so-called AGG3 type, which comprise a transmembrane domain, are exclusively found in plants. In model species, these proteins have been shown to participate in the control of plant height, branching and seed size and could therefore impact the harvestable yield of various crop plants. Whether AGG3-type γ-subunits influence yield in temperate cereals like barley and wheat remains unknown. Using a transgenic complementation approach, we show here that the Scottish malting barley cultivar (cv. Golden Promise carries a loss-of-function mutation in HvDep1, an AGG3-type subunit encoding gene that positively regulates culm elongation and seed size in barley. Somewhat intriguingly, agronomic field data collected over a 12-year period reveals that the HvDep1 loss-of-function mutation in cv. Golden Promise has the potential to confer either a significant increase or decrease in harvestable yield depending on the environment. Our results confirm the role of AGG3-type subunit-encoding genes in shaping plant architecture, but interestingly also indicate that the impact HvDep1 has on yield in barley is both genotypically and environmentally sensitive. This may explain why widespread exploitation of variation in AGG3-type subunit-encoding genes has not occurred in temperate cereals while in rice the DEP1 locus is widely exploited to improve harvestable yield.

  13. Effect of partially replacing a barley-based concentrate with flaxseed-based products on the rumen bacterial population of lactating Holstein dairy cows.

    Science.gov (United States)

    Castillo-Lopez, E; Moats, J; Aluthge, N D; Ramirez Ramirez, H A; Christensen, D A; Mutsvangwa, T; Penner, G B; Fernando, S C

    2018-01-01

    The effects of partial replacement of a barley-based concentrate with flaxseed-based products on the rumen bacterial population of lactating Holstein dairy cows were evaluated. Treatments fed were CONT, a normal diet that included barley silage, alfalfa hay and a barley-based concentrate that contained no flaxseed or faba beans; FLAX, inclusion of a nonextruded flaxseed-based product containing 55·0% flaxseed, 37·8% field peas and 6·9% alfalfa; EXT, similar to FLAX, but the product was extruded and EXTT, similar to FLAX, but product was extruded and field peas were replaced by high-tannin faba beans. The rumen bacterial population was evaluated by utilizing 16S rRNA gene sequencing. Most abundant phyla, families and genera were unaffected. However, some taxa were affected; for example, unsaturated fatty acid content was negatively correlated with Clostridiaceae, and tannin content was negatively correlated with BS11 and Paraprevotellaceae. Predominant rumen bacterial taxa were not affected, but the abundance of some taxa found in lower proportions shifted, possibly due to sensitivity to unsaturated fatty acids or tannins. Flaxseed-based products were effective for partially replacing barley-based concentrate in rations of lactating dairy cows. No negative effects of these products were observed on the abundance of predominant rumen bacterial taxa, with only minor shifts in less abundant bacteria. © 2017 The Authors. Journal of Applied Microbiology published by John Wiley & Sons Ltd on behalf of Society for Applied Microbiology.

  14. Effect of Barley and Enzyme on Performance, Carcass, Enzyme Activity and Digestion Parameters of Broilers

    Directory of Open Access Journals (Sweden)

    majid kalantar

    2016-04-01

    Full Text Available Introduction Corn has been recently used for producing ethanol fuel in the major corn-producing countries such as the US and Brazil. Recent diversion of corn for biofuel production along with the increased world's demand for this feedstuff has resulted in unprecedented rise in feed cost for poultry worldwide. Alternative grains such as wheat and barley can be successfully replaced for corn in poultry diets. These cereal grains can locally grow in many parts of the world as they have remarkably lower water requirement than corn. Wheat and barley are generally used as major sources of energy in poultry diets. Though the major components of these grains are starch and proteins, they have considerable content of non-starch polysaccharides (NSPs, derived from the cell walls (Olukosi et al. 2007; Mirzaie et al. 2012. NSPs are generally considered as anti-nutritional factors (Jamroz et al. 2002. The content and structure of NSP polymers vary between different grains, which consequently affect their nutritive value (Olukosi et al. 2007.Wheat and barley are generally used as major sources of energy in poultry diets. The major components of these grains are starch and proteins, they have considerable content of non-starch polysaccharides (NSPs, derived from the cell walls. NSPs are generally considered as anti-nutritional factors. The content and structure of NSP polymers vary between different grains, which consequently affect their nutritive value. The major part of NSPs in barley comprises polymers of (1→3 (1→4-β- glucans which could impede growth factors and consequently carcass quality through lowering the rate and amount of available nutrients in the mucosal surface of the intestinal. Materials and Methods This experiment was conducted to evaluate the effect of corn and barley based diets supplemented with multi-enzyme on growth, carcass, pancreas enzyme activity and physiological characteristics of broilers. A total number of 375 one day old

  15. Population-based resequencing analysis of wild and cultivated barley revealed weak domestication signal of selection and bottleneck in the Rrs2 scald resistance gene region.

    Science.gov (United States)

    Fu, Yong-Bi

    2012-02-01

    Many plant disease resistance (R) genes have been cloned, but the potential of utilizing these plant R-gene genomic resources for genetic inferences of plant domestication history remains unexplored. A population-based resequencing analysis of the genomic region near the Rrs2 scald resistance gene was made in 51 accessions of wild and cultivated barley from 41 countries. Fifteen primer pairs were designed to sample the genomic region with a total length of 10 406 bp. More nucleotide diversity was found in wild (π = 0.01846) than cultivated (π = 0.01507) barley samples. Three distinct groups of 29 haplotypes were detected for all 51 samples, and they were well mixed with wild and cultivated barley samples from different countries and regions. The neutrality tests by Tajima's D were not significant, but a significant (P events was 16 in wild barley and 19 in cultivated barley. A coalescence simulation revealed a bottleneck intensity of 1.5 to 2 since barley domestication. Together, the domestication signal in the genomic region was weak both in human selection and domestication bottleneck.

  16. Solidification Based Grain Refinement in Steels

    Science.gov (United States)

    2011-09-27

    Charpy impact values of 221J. In 2009 these alloys passed ballistic testing for MIL-PRF-32269 perforated armor. The FeMnAI alloys are 12-18...Stainless Steel Structure-Property Testing Task 7 Conduct Industrial Trial A test casting was selected based on its size and frequency of...Inclusion Particles," 1SIJ International, vol. 46, no. 6. pp 840-846 (2006). Task 9 Stainless Steel Structure-Property Testing The goal of Task 9 was

  17. Resistance of barley landraces and wild barley populations to powdery mildew in Jordan

    Directory of Open Access Journals (Sweden)

    Adel Abdel-Ghani

    2008-10-01

    Full Text Available Eleven barley (Hordeum vulgare L. landraces and 12 wild barley (H. spontaneum populations, collected from diverse eco-geographical regions of Jordan, were screened for resistance to powdery mildew. The average powdery mildew disease score (based on a 0 to 4 severity scale was <1 in all tested barley landraces. Disease scores in wild barley populations ranged from 1.2 to 3.8. Most barley landraces of all tested lines were highly resistant to powdery mildew. The percentage of wild barley lines exhibiting high resistance was 19%, while 45% of the lines were moderately resistant and 36% susceptible to powdery mildew. There was no significant correlation between weather variables (precipitation, temperature and altitude and the disease scores of either the barley landraces or the wild barley populations. However, resistance in wild barley was more common in humid districts and at higher altitudes. Both barley landrace and wild barley accessions could serve as potential donors for powdery mildew resistance genes to be transferred to barley varieties improved by plant breeding.

  18. Divergence of barley and oat varieties according to their content of β-glucan

    Directory of Open Access Journals (Sweden)

    Marković Stefan M.

    2017-01-01

    Full Text Available Barley and oat have been promoted for years as good sources of dietary fiber, especially β-glucan. Studies have shown a positive effect of barley and oat β-glucan on human health and as a result, there has been an increasing demand for β-glucans in the past decade. Thus, the variability of the β-glucan content was investigated in the grain of 10 barley and 10 oat varieties. The β-glucan contents were determined by the ICC Standard Method No 168. The content of β-glucan in the analyzed barley varieties were within the range 3.52–7.81% and in analyzed oat varieties, the content of β-glucan were within the range of 3.15–7.28%. Among analyzed barley varieties, Novosadski 314 contained the highest content of β-glucan (7.81%, while Tomba had the highest content of β-glucan (7.28% in the analyzed oat varieties. Based on the results, it could be concluded that there is genetic diversity of oat and barley varieties with respect to their β-glucan content. This fact enables varieties with a high a nutritional capacity to be selected.

  19. Nature-based agricultural solutions: Scaling perennial grains across Africa.

    Science.gov (United States)

    Peter, Brad G; Mungai, Leah M; Messina, Joseph P; Snapp, Sieglinde S

    2017-11-01

    Modern plant breeding tends to focus on maximizing yield, with one of the most ubiquitous implementations being shorter-duration crop varieties. It is indisputable that these breeding efforts have resulted in greater yields in ideal circumstances; however, many farmed locations across Africa suffer from one or more conditions that limit the efficacy of modern short-duration hybrids. In view of global change and increased necessity for intensification, perennial grains and long-duration varieties offer a nature-based solution for improving farm productivity and smallholder livelihoods in suboptimal agricultural areas. Specific conditions where perennial grains should be considered include locations where biophysical and social constraints reduce agricultural system efficiency, and where conditions are optimal for crop growth. Using a time-series of remotely-sensed data, we locate the marginal agricultural lands of Africa, identifying suboptimal temperature and precipitation conditions for the dominant crop, i.e., maize, as well as optimal climate conditions for two perennial grains, pigeonpea and sorghum. We propose that perennial grains offer a lower impact, sustainable nature-based solution to this subset of climatic drivers of marginality. Using spatial analytic methods and satellite-derived climate information, we demonstrate the scalability of perennial pigeonpea and sorghum across Africa. As a nature-based solution, we argue that perennial grains offer smallholder farmers of marginal lands a sustainable solution for enhancing resilience and minimizing risk in confronting global change, while mitigating social and edaphic drivers of low and variable production. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  20. Effects of Net Blotch ( Pyrenophora teres ) on Malt Barley Yield and ...

    African Journals Online (AJOL)

    Barley (Hordeum vulgare L.) production is constrained by diseases such as net blotch caused by Pyrenophora teres Drechsl. The objectives of this study were to assess the effects of net blotch disease on malt barley yield and grain quality under natural infection. Four malt barley varieties (Beka, HB 120, HB 52 and Holker), ...

  1. Molecular identification based on coat protein sequences of the Barley yellow dwarf virus from Brazil

    OpenAIRE

    Mar, Talita Bernardon; Lau, Douglas; Schons, Jurema; Yamazaki-Lau, Elene; Nhani Jr., Antônio

    2013-01-01

    Yellow dwarf disease, one of the most important diseases of cereal crops worldwide, is caused by virus species belonging to the Luteoviridae family. Forty-two virus isolates obtained from oat (Avena sativa L.), wheat (Triticum aestivum L.), barley (Hordeum vulgare L.), corn (Zea mays L.), and ryegrass (Lolium multiflorum Lam.) collected between 2007 and 2008 from winter cereal crop regions in southern Brazil were screened by polymerase chain reaction (PCR) with primers designed on ORF 3 (coat...

  2. Analyses of Spring Barley Evapotranspiration Rates Based on Gradient Measurements and Dual Crop Coefficient Model

    Czech Academy of Sciences Publication Activity Database

    Pozníková, Gabriela; Fischer, Milan; Pohanková, Eva; Trnka, Miroslav

    2014-01-01

    Roč. 62, č. 5 (2014), s. 1079-1086 ISSN 1211-8516 R&D Projects: GA MŠk LH12037; GA MŠk(CZ) EE2.3.20.0248 Institutional support: RVO:67179843 Keywords : evapotranspiration * dual crop coefficient model * Bowen ratio/energy balance method * transpiration * soil evaporation * spring barley Subject RIV: EH - Ecology, Behaviour OBOR OECD: Environmental sciences (social aspects to be 5.7)

  3. A micromechanical approach of suffusion based on a length scale analysis of the grain detachment and grain transport processes.

    Science.gov (United States)

    Wautier, Antoine; Bonelli, Stéphane; Nicot, François

    2017-06-01

    Suffusion is the selective erosion of the finest particles of a soil subjected to an internal flow. Among the four types of internal erosion and piping identified today, suffusion is the least understood. Indeed, there is a lack of micromechanical approaches for identifying the critical microstructural parameters responsible for this process. Based on a discrete element modeling of non cohesive granular assemblies, specific micromechanical tools are developed in a unified framework to account for the two first steps of suffusion, namely the grain detachment and the grain transport processes. Thanks to the use of an enhanced force chain definition and autocorrelation functions the typical lengths scales associated with grain detachment are characterized. From the definition of transport paths based on a graph description of the pore space the typical lengths scales associated with grain transport are recovered. For a uniform grain size distribution, a separation of scales between these two processes exists for the finest particles of a soil

  4. A micromechanical approach of suffusion based on a length scale analysis of the grain detachment and grain transport processes.

    Directory of Open Access Journals (Sweden)

    Wautier Antoine

    2017-01-01

    Full Text Available Suffusion is the selective erosion of the finest particles of a soil subjected to an internal flow. Among the four types of internal erosion and piping identified today, suffusion is the least understood. Indeed, there is a lack of micromechanical approaches for identifying the critical microstructural parameters responsible for this process. Based on a discrete element modeling of non cohesive granular assemblies, specific micromechanical tools are developed in a unified framework to account for the two first steps of suffusion, namely the grain detachment and the grain transport processes. Thanks to the use of an enhanced force chain definition and autocorrelation functions the typical lengths scales associated with grain detachment are characterized. From the definition of transport paths based on a graph description of the pore space the typical lengths scales associated with grain transport are recovered. For a uniform grain size distribution, a separation of scales between these two processes exists for the finest particles of a soil

  5. Comparison of stability statistics for yield in barley ( Hordeum ...

    African Journals Online (AJOL)

    The objectives of this study were to assess interrelationship among these measures and to identify high-yield and stable barley (Hordeum vulgare L.) cultivars in 11 environments during 2001 - 2003 in the central Black Sea region of Turkey. Significant differences were observed among barley cultivars for grain yield, ...

  6. stability analysis of food barley genotypes in northern ethiopia

    African Journals Online (AJOL)

    ACSS

    Barley (Hordeum vulgare L.) is one of the founder crops of the old world agriculture and was one of the first domesticated cereals. The objective of this study was to estimate the magnitude of genotype x environment interaction and stability for barley grain yield and yield related traits in the growing areas of Tigray. Eight.

  7. Genomic Prediction of Barley Hybrid Performance

    Directory of Open Access Journals (Sweden)

    Norman Philipp

    2016-07-01

    Full Text Available Hybrid breeding in barley ( L. offers great opportunities to accelerate the rate of genetic improvement and to boost yield stability. A crucial requirement consists of the efficient selection of superior hybrid combinations. We used comprehensive phenotypic and genomic data from a commercial breeding program with the goal of examining the potential to predict the hybrid performances. The phenotypic data were comprised of replicated grain yield trials for 385 two-way and 408 three-way hybrids evaluated in up to 47 environments. The parental lines were genotyped using a 3k single nucleotide polymorphism (SNP array based on an Illumina Infinium assay. We implemented ridge regression best linear unbiased prediction modeling for additive and dominance effects and evaluated the prediction ability using five-fold cross validations. The prediction ability of hybrid performances based on general combining ability (GCA effects was moderate, amounting to 0.56 and 0.48 for two- and three-way hybrids, respectively. The potential of GCA-based hybrid prediction requires that both parental components have been evaluated in a hybrid background. This is not necessary for genomic prediction for which we also observed moderate cross-validated prediction abilities of 0.51 and 0.58 for two- and three-way hybrids, respectively. This exemplifies the potential of genomic prediction in hybrid barley. Interestingly, prediction ability using the two-way hybrids as training population and the three-way hybrids as test population or vice versa was low, presumably, because of the different genetic makeup of the parental source populations. Consequently, further research is needed to optimize genomic prediction approaches combining different source populations in barley.

  8. An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment

    Directory of Open Access Journals (Sweden)

    Péter Szűcs

    2009-07-01

    Full Text Available Barley ( L. is an economically important model plant for genetics research. Barley is currently served by an increasingly comprehensive set of tools for genetic analysis that have recently been augmented by high-density genetic linkage maps built with gene-based single nucleotide polymorphisms (SNPs. These SNP-based maps need to be aligned with earlier generation maps, which were used for quantitative trait locus (QTL detection, by integrating multiple types of markers into a single map. A 2383 locus linkage map was developed using the Oregon Wolfe Barley (OWB Mapping Population to allow such alignments. The map is based on 1472 SNP, 722 DArT, and 189 prior markers which include morphological, simple sequence repeat (SSR, Restriction Fragment Length Polymorphism (RFLP, and sequence tagged site (STS loci. This new OWB map forms, therefore, a useful bridge between high-density SNP-only maps and prior QTL reports. The application of this bridge concept is shown using malting-quality QTLs from multiple mapping populations, as reported in the literature. This is the first step toward developing a Barley QTL Community Curation workbook for all types of QTLs and maps, on the GrainGenes website. The OWB-related resources are available at OWB Data and GrainGenes Tools (OWB-DGGT (.

  9. Application of fluorescence-based semi-automated AFLP analysis in barley and wheat

    DEFF Research Database (Denmark)

    Schwarz, G.; Herz, M.; Huang, X.Q.

    2000-01-01

    of semi-automated codominant analysis for hemizygous AFLP markers in an F-2 population was too low, proposing the use of dominant allele-typing defaults. Nevertheless, the efficiency of genetic mapping, especially of complex plant genomes, will be accelerated by combining the presented genotyping......Genetic mapping and the selection of closely linked molecular markers for important agronomic traits require efficient, large-scale genotyping methods. A semi-automated multifluorophore technique was applied for genotyping AFLP marker loci in barley and wheat. In comparison to conventional P-33...

  10. Genomic Prediction in Barley

    DEFF Research Database (Denmark)

    Edriss, Vahid; Cericola, Fabio; Jensen, Jens D

    2015-01-01

    Genomic prediction uses markers (SNPs) across the whole genome to predict individual breeding values at an early growth stage potentially before large scale phenotyping. One of the applications of genomic prediction in plant breeding is to identify the best individual candidate lines to contribute...... to next generation. The main goal of this study was to see the potential of using genomic prediction in a commercial Barley breeding program. The data used in this study was from Nordic Seed company which is located in Denmark. Around 350 advanced lines were genotyped with 9K Barely chip from Illumina....... Traits used in this study were grain yield, plant height and heading date. Heading date is number days it takes after 1st June for plant to head. Heritabilities were 0.33, 0.44 and 0.48 for yield, height and heading, respectively for the average of nine plots. The GBLUP model was used for genomic...

  11. The non-touching method of the malting barley quality evaluation

    Science.gov (United States)

    Raba, B.; Nowakowski, K.; Lewicki, A.; Przybył, K.; Zaborowicz, M.; Koszela, K.; Boniecki, P.; Mueller, W.

    2014-04-01

    The first important stage of the malt production processes is the malting barley quality evaluation. Presented project was focused on the visual features of malting barley grains. The principal aim was to elaborate complete methodology to determine the level of grains contamination. The article describes the mechanisms of choosing parameters which can distinguish useful for the malt production grains from defects and impurities. Original computer system 'Hordeum v 3.1' helped obtain graphical data from images of contaminated barley samples. Research carried out in this area can improve the quality evaluation process of malting barley.

  12. Molecular identification based on coat protein sequences of the Barley yellow dwarf virus from Brazil

    Directory of Open Access Journals (Sweden)

    Talita Bernardon Mar

    2013-12-01

    Full Text Available Yellow dwarf disease, one of the most important diseases of cereal crops worldwide, is caused by virus species belonging to the Luteoviridae family. Forty-two virus isolates obtained from oat (Avena sativa L., wheat (Triticum aestivum L., barley (Hordeum vulgare L., corn (Zea mays L., and ryegrass (Lolium multiflorum Lam. collected between 2007 and 2008 from winter cereal crop regions in southern Brazil were screened by polymerase chain reaction (PCR with primers designed on ORF 3 (coat protein - CP for the presence of Barley yellow dwarf virus and Cereal yellow dwarf virus (B/CYDV. PCR products of expected size (~357 bp for subgroup II and (~831 bp for subgroup I were obtained for three and 39 samples, respectively. These products were cloned and sequenced. The subgroup II 3' partial CP amino acid deduced sequences were identified as BYDV-RMV (92 - 93 % of identity with "Illinois" Z14123 isolate. The complete CP amino acid deduced sequences of subgroup I isolates were confirmed as BYDV-PAV (94 - 99 % of identity and established a very homogeneous group (identity higher than 99 %. These results support the prevalence of BYDV-PAV in southern Brazil as previously diagnosed by Enzyme-Linked Immunosorbent Assay (ELISA and suggest that this population is very homogeneous. To our knowledge, this is the first report of BYDV-RMV in Brazil and the first genetic diversity study on B/CYDV in South America.

  13. Barley callus

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Blennow, Per Gunnar Andreas; Nielsen, Morten M.

    2012-01-01

    Background Starch is the most important source of calories for human nutrition and the majority of it is produced by cereal farming. Starch is also used as a renewable raw material in a range of industrial sectors. It can be chemically modified to introduce new physicochemical properties...... genes in planta. Results We explored the possibility to use transgenic barley callus generated from immature embryo for a fast test of transgenic modification strategies of starch biosynthesis. We found that this callus contains 4 % (w/w dw) starch granules, which we could modify by generating fully...... suggest that this method can be used as a time-efficient model system for fast screening of candidate genes for the generation of modified starch or new types of carbohydrate polymers....

  14. Genome-wide association mapping in winter barley for grain yield and culm cell wall polymer content using the high-throughput CoMPP technique

    DEFF Research Database (Denmark)

    Bellucci, Andrea; Tondelli, Alessandro; Fangel, Jonatan Ulrik

    2017-01-01

    performances with an average reduction of ~ 50% for grain and straw harvested in comparison to the second year. The genetic determination (GD) for grain yield was 0.49 and 0.70, for the two years respectively, and for straw yield GD was low in 2009 (0.09) and higher in 2010 (0.29). Cell wall polymers in culms...... gene, which is known to regulate resistance to BaYMV. Subsequently the QTL was shown to be tightly linked to rym4, a locus for resistance to the virus. GWAs on arabinans quantified by LM6 resulted in the identification of major QTLs closely located on 3H and hypotheses regarding putative candidate...

  15. BarleyBase—an expression profiling database for plant genomics

    Science.gov (United States)

    Shen, Lishuang; Gong, Jian; Caldo, Rico A.; Nettleton, Dan; Cook, Dianne; Wise, Roger P.; Dickerson, Julie A.

    2005-01-01

    BarleyBase (BB) (www.barleybase.org) is an online database for plant microarrays with integrated tools for data visualization and statistical analysis. BB houses raw and normalized expression data from the two publicly available Affymetrix genome arrays, Barley1 and Arabidopsis ATH1 with plans to include the new Affymetrix 61K wheat, maize, soybean and rice arrays, as they become available. BB contains a broad set of query and display options at all data levels, ranging from experiments to individual hybridizations to probe sets down to individual probes. Users can perform cross-experiment queries on probe sets based on observed expression profiles and/or based on known biological information. Probe set queries are integrated with visualization and analysis tools such as the R statistical toolbox, data filters and a large variety of plot types. Controlled vocabularies for gene and plant ontologies, as well as interconnecting links to physical or genetic map and other genomic data in PlantGDB, Gramene and GrainGenes, allow users to perform EST alignments and gene function prediction using Barley1 exemplar sequences, thus, enhancing cross-species comparison. PMID:15608273

  16. Controle de Bipolaris sorokiniana e rendimento de grãos em cevada após aplicação de elicitores e fungicida = Bipolaris sorokiniana control and grain yield in barley after application of elicitors and fungicide

    Directory of Open Access Journals (Sweden)

    Noemir Antoniazzi

    2007-12-01

    Full Text Available A mancha marrom causada pelo fungo Bipolaris sorokiniana é considerada um dos problemas fitossanitários mais importantes na cevada provocando reduções na produtividade e prejuízos na qualidade cervejeira. O objetivo deste trabalho foi avaliar o efeito dos elicitores goma xantana e alicina e do fungicida epoxiconazole + piraclostrobina no controle da mancha marrom em cevada cervejeira, cultivar BRS 195 em dois ciclos de cultivo. O experimento foi conduzido na Fundação Agrária de Pesquisa Agropecuária (FAPA, em Guarapuava, Estado do Paraná, em delineamento de blocos ao acaso, comquatro repetições. A aplicação de elicitores e fungicida resultou em maior peso de mil sementes, sem interferir no teor de proteínas e na classificação comercial. O rendimento de grãos foi superior após duas ou três aplicações de alicina. A incidência e severidade de B.sorokiniana nas folhas de plantas tratadas com elicitores foram semelhantes àquelas com fungicida.The disease spot blotch, caused by the fungi Bipolaris sorokiniana, is considered one of the most important phytosanitary problems ofbarley crop resulting on low productivity and damage on beer quality. The objective of this work was to evaluate the effect of the elicitors xanthan gum and alicin and fungicide epoxiconazole + pyraclostrobin on spot blotch control of barley cultivar BRS 195 during two cultivation cycles. The experiment was carried out at Fundação Agrária de Pesquisa Agropecuária (FAPA, Guarapuava, state of Paraná. The experimental design was in completely randomized blocks, with four replications. Treatment of barley plants withelicitors and fungicide resulted in higher thousand-seed weight without interfering on protein content and commercial classification. The grain yield increased after two or three alicin treatments. Bipolaris sorokiniana incidence and severety on the leaves of plants treated with elicitors were similar to those treated with fungicide.

  17. An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers

    Directory of Open Access Journals (Sweden)

    María Muñoz-Amatriaín

    2011-11-01

    Full Text Available Recent advances in high-throughput genotyping have made it easier to combine information from different mapping populations into consensus genetic maps, which provide increased marker density and genome coverage compared to individual maps. Previously, a single nucleotide polymorphism (SNP-based genotyping platform was developed and used to genotype 373 individuals in four barley ( L. mapping populations. This led to a 2943 SNP consensus genetic map with 975 unique positions. In this work, we add data from six additional populations and more individuals from one of the original populations to develop an improved consensus map from 1133 individuals. A stringent and systematic analysis of each of the 10 populations was performed to achieve uniformity. This involved reexamination of the four populations included in the previous map. As a consequence, we present a robust consensus genetic map that contains 2994 SNP loci mapped to 1163 unique positions. The map spans 1137.3 cM with an average density of one marker bin per 0.99 cM. A novel application of the genotyping platform for gene detection allowed the assignment of 2930 genes to flow-sorted chromosomes or arms, confirmed the position of 2545 SNP-mapped loci, added chromosome or arm allocations to an additional 370 SNP loci, and delineated pericentromeric regions for chromosomes 2H to 7H. Marker order has been improved and map resolution has been increased by almost 20%. These increased precision outcomes enable more optimized SNP selection for marker-assisted breeding and support association genetic analysis and map-based cloning. It will also improve the anchoring of DNA sequence scaffolds and the barley physical map to the genetic map.

  18. Stomatal ozone fluxes over a barley field in Italy. "Effective exposure" as a possible link between exposure- and flux-based approaches

    Science.gov (United States)

    Gerosa, Giacomo; Marzuoli, Riccardo; Cieslik, Stanislaw; Ballarin-Denti, Antonio

    Fluxes of ozone as well as of sensible and latent heat were measured over a barley field in Northern Italy from April to June 2002 with the eddy-correlation technique in order to determine the dose of ozone taken up by plants during the whole grain filling and maturation period. Stomatal ozone fluxes were then calculated by using the similarity between gaseous exchange processes occurring inside the stomata involving ozone and water vapour, whose flux was available from the measurements. The dose was then obtained by integrating the stomatal flux over time. On the average, the stomatal flux was found to be approximately 50% of the total flux. This approach was compared to the currently used ozone risk assessment procedure based on the use of the exposure index AOT40, calculated from routine ozone concentration records. Important differences between these two approaches appeared. In order to assess ozone risk to vegetation in a realistic way, a new concept of "effective exposure", which combines both exposure and uptake approaches, is developed. A new risk assessment index is obtained by weighting exposure by a factor which includes stomatal conductance, obtained by a modelling procedure, which uses observational data available from routine monitoring stations. This new index, formally similar to AOT40, uses a lower ozone concentration threshold (evolution than the original AOT40 index. This approach permits to calculate ozone exposure taking physiological aspects into account, for situations where only ozone concentrations and meteorological observations are available, as direct flux data are difficult to obtain on a routine basis.

  19. Brewing with fractionated barley

    NARCIS (Netherlands)

    Donkelaar, van L.H.G.

    2016-01-01

    Brewing with fractionated barley

    Beer is a globally consumed beverage, which is produced from malted barley, water, hops and yeast. In recent years, the use of unmalted barley and exogenous enzymes have become more popular because they enable simpler processing and reduced environmental

  20. Brewing with fractionated barley

    NARCIS (Netherlands)

    Donkelaar, van L.H.G.

    2016-01-01

    Brewing with fractionated barley Beer is a globally consumed beverage, which is produced from malted barley, water, hops and yeast. In recent years, the use of unmalted barley and exogenous enzymes have become more popular because they enable simpler processing and reduced environmental impact. Raw

  1. Breeding of proanthocyanidin free malting barley

    International Nuclear Information System (INIS)

    Andersen, Anna Maria

    1990-01-01

    Full text: Haze formation in stored beer is due to colloidal precipitation of proteins with polyphenols of which proanthocyanidins are the most important group. 70-80% of proanthocyanidin in beer are from barley malt. Today breweries attain haze stability by using enzymes, additives or adsorbents. A better solution would be to remove proanthocyanidins. Carlsberg Plant Breeding uses induced mutations to breed proanthocyanidin-free malting barley. After mutagen treatment with sodium azide M1 seeds are planted in the field and M2 seeds are harvested in bulk. A single seed, non-destructive method has been developed to identify mutant kernels lacking proanthocyanidins in the testa. The method involves the inclusion of M2 seeds - 50 at a time - in semisolid clay blocks, whereafter a small part of the endosperm, testa and pericarp are exposed by sanding the seeds. The clay block is then placed in a vanillin-HCI solution so that the uncovered tissues can react with the solution. A red colour will develop in the testa of normal seeds, whereas the testa layers of proanthocyanid-free seeds remain colourless. So far, more than 600 mutants have been induced in over 100 barley varieties, spring as well as winter-types, from barley producing areas around the world. The mutants can be assigned to at least 7 loci, all of which can block the biosynthetic pathway for the proanthocyanidins. Mutants in the ant-18 and ant-19 loci show poor kernel development. Only a few mutants are known in the ant-12, ant-22 and ant-25 loci. Breeding work is focussed on mutants belonging to the ant-13 and ant-17 loci. Whereas the malting quality of ant-17 lines suffer from apparent abnormal enzyme development in the aleurone layer, this defect does not exist in ant-13 lines. Brewing trials with proanthocyanidin-free malt have shown excellent haze stability without changes in beer flavour. Breeding work based on the ant-13 lines led to disease resistant lines with good malting quality, while grain yield

  2. Fermentation of barley by using Saccharomyces cerevisiae: examination of barley as a feedstock for bioethanol production and value-added products.

    Science.gov (United States)

    Gibreel, Amera; Sandercock, James R; Lan, Jingui; Goonewardene, Laksiri A; Zijlstra, Ruurd T; Curtis, Jonathan M; Bressler, David C

    2009-03-01

    The objective of this study was to examine the ethanol yield potential of three barley varieties (Xena, Bold, and Fibar) in comparison to two benchmarks, corn and wheat. Very high gravity (VHG; 30% solids) fermentations using both conventional and Stargen 001 enzymes for starch hydrolysis were carried out as simultaneous saccharification and fermentation. The grains and their corresponding dried distiller's grain with solubles (DDGS) were also analyzed for nutritional and value-added characteristics. A VHG traditional fermentation approach utilizing jet-cooking fermentation revealed that both dehulled Bold and Xena barley produced ethanol concentrations higher than that produced by wheat (12.3, 12.2, and 11.9%, respectively) but lower than that produced by corn (13.8%). VHG-modified Stargen-based fermentation of dehulled Bold barley demonstrated comparable performance (14.3% ethanol) relative to that of corn (14.5%) and wheat (13.3%). Several important components were found to survive fermentation and were concentrated in DDGS. The highest yield of phenolics was detected in the DDGS (modified Stargen 001, 20% solids) of Xena (14.6 mg of gallic acid/g) and Bold (15.0 mg of gallic acid/g) when the hull was not removed before fermentation. The highest concentration of sterols in DDGS from barley was found in Xena (3.9 mg/g) when the hull was included. The DDGS recovered from corn had the highest concentration of fatty acids (72.6 and 77.5 mg/g). The DDGS recovered from VHG jet-cooking fermentations of Fibar, dehulled Bold, and corn demonstrated similar levels of tocopherols and tocotrienols. Corn DDGS was highest in crude fat but was lowest in crude protein and in vitro energy digestibility. Wheat DDGS was highest in crude protein content, similar to previous studies. The barley DDGS was the highest in in vitro energy digestibility.

  3. Development of endosperm transfer cells in barley

    Directory of Open Access Journals (Sweden)

    Johannes eThiel

    2014-03-01

    Full Text Available Endosperm transfer cells (ETCs are positioned at the intersection of maternal and filial tissues in seeds of cereals and represent a bottleneck for apoplasmic transport of assimilates into the endosperm. Endosperm cellularization starts at the maternal-filial boundary and generates the highly specialized ETCs. During differentiation barley ETCs develop characteristic flange-like wall ingrowths to facilitate effective nutrient transfer. A comprehensive morphological analysis depicted distinct developmental time points in establishment of transfer cell morphology and revealed intracellular changes possibly associated with cell wall metabolism. Embedded inside the grain, ETCs are barely accessible by manual preparation. To get tissue-specific information about ETC specification and differentiation, laser microdissection(LM-based methods were used for transcript and metabolite profiling. Transcriptome analysis of ETCs at different developmental stages by microarrays indicated activated gene expression programs related to control of cell proliferation and cell shape, cell wall and carbohydrate metabolism reflecting the morphological changes during early ETC development. Transporter genes reveal distinct expression patterns suggesting a switch from active to passive modes of nutrient uptake with the onset of grain filling. Tissue-specific RNA-seq of the differentiating ETC region from the syncytial stage until functionality in nutrient transfer identified a high number of novel transcripts putatively involved in ETC differentiation. An essential role for two-component signaling (TCS pathways in transfer cell development of barley emerged from this analysis. Correlative data provide evidence for ABA and ethylene influences on ETC differentiation and hint at a crosstalk between hormone signal transduction and TCS phosphorelays. Collectively, the data expose a comprehensive view on ETC development, associated pathways and identified candidate genes for

  4. Uptake of [14C]triadimenol via grain and root after seed treatment of winter barley with a flowable seed dressing: Influence of soil moisture and sowing date on the distribution of radioactivity and active ingredient content in plant and soil

    International Nuclear Information System (INIS)

    Schneider, M.

    1988-12-01

    Winter barley seed of the 'Vogelsander Gold' variety was shown in a total of 7 lysimeters after seed treatment with [benzene ring-U- 14 C]triadimenol in the formulation as [ 14 C]Baytan 075 FS and [ 14 C]Baytan 25 DS at an early (September) and a late date (October). After both dates of sowing, the FS-treated winter barley developed under 3 different soil moisture conditions. The radioactivity and active ingredient contents in plants and soil were recorded until tillering as a function of low, high and natural precipitation after sowing. Details on the uptake of radioactivity via grain and roots were quantitatively and qualitatively studied in two further lysimeters, a pot experiment as well as experiments in the growth chamber. The results are presented and discussed in detail. (orig./MG) [de

  5. Lactobacilli Are Prominent Members of the Microbiota Involved in the Ruminal Digestion of Barley and Corn

    Directory of Open Access Journals (Sweden)

    Hee E. Yang

    2018-04-01

    Full Text Available The chemical composition of barley grain can vary among barley varieties (Fibar, Xena, McGwire, and Hilose and result in different digestion efficiencies in the rumen. It is not known if compositional differences in barley can affect the microbiota involved in the ruminal digestion of barley. The objective of this study was to characterize the in situ rumen degradability and microbiota of four barley grain varieties and to compare these to corn. Three ruminally cannulated heifers were fed a low (60% barley silage, 37% barley grain, and 3% supplement or high grain (37% barley silage, 60% barley grain, and 3% supplement diet. One set of bags was used to estimate dry matter (DM, starch and crude protein (CP degradability. A second set was used to extract DNA from the adherent microbiota and visualize grain after incubation using scanning electron microscopy (SEM. DNA was subjected to amplicon 16S rRNA gene sequencing followed by analysis using QIIME. In the low grain diet, McGwire had the highest effective degradability (ED of DM (P < 0.01. The ED of starch was highest (P < 0.01 for Fibar, McGwire, and Xena, but the ED of CP was not affected by variety. For the high grain diet, Xena and McGwire had the highest ED of DM (P < 0.01. The ED of starch was highest (P < 0.01 for Xena and Fibar. The ED of protein was highest (P < 0.01 for Xena and McGwire. Although the microbiota did not differ among barley varieties, they did differ from corn and with incubation time. Lactobacilli were dominant members of the mature biofilms associated with corn and barley and were accompanied by a notable increase in the lactic acid utilizing genera, Megasphaera. As none of the cattle exhibited subclinical or clinical acidosis during the study, our results suggest that lactobacilli play a more prominent role in routine starch digestion than presently surmised.

  6. Inclusion of sunflower seed and wheat dried distillers' grains with solubles in a red clover silage-based diet enhances steers performance, meat quality and fatty acid profiles.

    Science.gov (United States)

    Mapiye, C; Aalhus, J L; Turner, T D; Vahmani, P; Baron, V S; McAllister, T A; Block, H C; Uttaro, B; Dugan, M E R

    2014-12-01

    The current study compared beef production, quality and fatty acid (FA) profiles of yearling steers fed a control diet containing 70 : 30 red clover silage (RCS) : barley-based concentrate, a diet containing 11% sunflower seed (SS) substituted for barley, and diets containing SS with 15% or 30% wheat dried distillers' grain with solubles (DDGS). Additions of DDGS were balanced by reductions in RCS and SS to maintain crude fat levels in diets. A total of two pens of eight animals were fed per diet for an average period of 208 days. Relative to the control diet, feeding the SS diet increased (Pdiets v. the SS diet further increased (Pdiets did not change FA proportions relative to feeding the SS diet. Overall, adding SS to a RCS-based diet enhanced muscle proportions of 18:2n-6 biohydrogenation products, and further substitutions of DDGS in the diet improved beef production, and quality while maintaining proportions of potentially functional bioactive FA including vaccenic and rumenic acids.

  7. Does Whole Grain Consumption Alter Gut Microbiota and Satiety?

    Directory of Open Access Journals (Sweden)

    Danielle N. Cooper

    2015-05-01

    Full Text Available This review summarizes recent studies examining whole grain consumption and its effect on gut microbiota and satiety in healthy humans. Studies comparing whole grains to their refined grain counterparts were considered, as were studies comparing different grain types. Possible mechanisms linking microbial metabolism and satiety are described. Clinical trials show that whole grain wheat, maize, and barley alter the human gut microbiota, but these findings are based on a few studies that do not include satiety components, so no functional claims between microbiota and satiety can be made. Ten satiety trials were evaluated and provide evidence that whole oats, barley, and rye can increase satiety, whereas the evidence for whole wheat and maize is not compelling. There are many gaps in the literature; no one clinical trial has examined the effects of whole grains on satiety and gut microbiota together. Once understanding the impact of whole grains on satiety and microbiota is more developed, then particular grains might be used for better appetite control. With this information at hand, healthcare professionals could make individual dietary recommendations that promote satiety and contribute to weight control.

  8. Estimating Biomass of Barley Using Crop Surface Models (CSMs Derived from UAV-Based RGB Imaging

    Directory of Open Access Journals (Sweden)

    Juliane Bendig

    2014-10-01

    Full Text Available Crop monitoring is important in precision agriculture. Estimating above-ground biomass helps to monitor crop vitality and to predict yield. In this study, we estimated fresh and dry biomass on a summer barley test site with 18 cultivars and two nitrogen (N-treatments using the plant height (PH from crop surface models (CSMs. The super-high resolution, multi-temporal (1 cm/pixel CSMs were derived from red, green, blue (RGB images captured from a small unmanned aerial vehicle (UAV. Comparison with PH reference measurements yielded an R2 of 0.92. The test site with different cultivars and treatments was monitored during “Biologische Bundesanstalt, Bundessortenamt und CHemische Industrie” (BBCH Stages 24–89. A high correlation was found between PH from CSMs and fresh biomass (R2 = 0.81 and dry biomass (R2 = 0.82. Five models for above-ground fresh and dry biomass estimation were tested by cross-validation. Modelling biomass between different N-treatments for fresh biomass produced the best results (R2 = 0.71. The main limitation was the influence of lodging cultivars in the later growth stages, producing irregular plant heights. The method has potential for future application by non-professionals, i.e., farmers.

  9. Unraveling the major triticeae phytases – towards cereals with high grain phytase activity

    DEFF Research Database (Denmark)

    Madsen, Claus Krogh

    acid constitutes the most important anti nutritional factor for the bioavailability of minerals. However, the mature grain phytase activity varies considerably between plant species and between cultivars. Cereals like rye, wheat and barley possess significant phytase activity with the potential...... why the mature grains of some cereal species has much higher phytase activity than others and (3) devise ways for improving the phytase activity in cereals based on their own genetic potential....

  10. Haplotyping, linkage mapping and expression analysis of barley genes regulated by terminal drought stress influencing seed quality

    Directory of Open Access Journals (Sweden)

    Wobus Ulrich

    2011-01-01

    Full Text Available Abstract Background The increasingly narrow genetic background characteristic of modern crop germplasm presents a challenge for the breeding of cultivars that require adaptation to the anticipated change in climate. Thus, high priority research aims at the identification of relevant allelic variation present both in the crop itself as well as in its progenitors. This study is based on the characterization of genetic variation in barley, with a view to enhancing its response to terminal drought stress. Results The expression patterns of drought regulated genes were monitored during plant ontogeny, mapped and the location of these genes was incorporated into a comprehensive barley SNP linkage map. Haplotypes within a set of 17 starch biosynthesis/degradation genes were defined, and a particularly high level of haplotype variation was uncovered in the genes encoding sucrose synthase (types I and II and starch synthase. The ability of a panel of 50 barley accessions to maintain grain starch content under terminal drought conditions was explored. Conclusion The linkage/expression map is an informative resource in the context of characterizing the response of barley to drought stress. The high level of haplotype variation among starch biosynthesis/degradation genes in the progenitors of cultivated barley shows that domestication and breeding have greatly eroded their allelic diversity in current elite cultivars. Prospective association analysis based on core drought-regulated genes may simplify the process of identifying favourable alleles, and help to understand the genetic basis of the response to terminal drought.

  11. Changes in Microbiota in Rumen Digesta and Feces Due to a Grain-Based Subacute Ruminal Acidosis (SARA) Challenge

    DEFF Research Database (Denmark)

    Plaizier, Jan C.; Li, Shucong; Danscher, Anne Mette

    2017-01-01

    The effects of a grain-based subacute ruminal acidosis (SARA) challenge on bacteria in the rumen and feces of lactating dairy cows were determined. Six lactating, rumen-cannulated Danish Holstein cows were used in a cross-over study with two periods. Periods included two cows on a control diet...... and two cows on a SARA challenge. The control diet was a total mixed ration containing 45.5% dry matter (DM), 43.8% DM neutral detergent fiber, and 19.6% DM starch. The SARA challenge was conducted by gradually substituting the control diet with pellets containing 50% wheat and 50% barley over 3 days...... to reach a diet containing 55.6% DM, 31.3% DM neutral detergent fiber, and 31.8% DM starch, which was fed for four more days. Rumen fluid samples were collected at day 7 and 10 of experimental periods. Feces samples were collected on days 8 and 10 of these periods. Extracted DNA from the rumen and feces...

  12. Investigation of grain competitive growth during directional solidification of single-crystal nickel-based superalloys

    International Nuclear Information System (INIS)

    Zhao, Xinbao; Liu, Lin; Zhang, Jun

    2015-01-01

    Grain competitive growth of nickel-based single-crystal superalloys during directional solidification was investigated. A detailed characterization of bi-crystals' competitive growth was performed to explore the competitive grain evolution. It was found that high withdrawal rate improved the efficiency of grain competitive growth. The overgrowth rate was increased when the misorientation increased. Four patterns of grain competitive growth with differently oriented dispositions were characterized. The results indicated that the positive branching of the dendrites played a significant role in the competitive growth process. The effect of crystal orientation and heat flow on the competitive growth can be attributed to the blocking mechanism between the adjacent grains. (orig.)

  13. analysis and correlation of stability parameters in malting barley

    African Journals Online (AJOL)

    Administrator

    Interaction principal component axis (IPCA) scores,. Additive .... TABLE 1. Additive main effects and multiplicative interactions (AMMI) analysis of variance for grain yield of 20 genotypes of ... BLE 2. Mean grain yield and genotypic stability parameters for 20 malting barley genotypes grown over 12 environments in Ethiopia.

  14. Functional proteomics of barley and barley chloroplasts – strategies, methods and perspectives

    DEFF Research Database (Denmark)

    Petersen, Jørgen; Rogowska-Wrzesinska, Adelina; Jensen, Ole Nørregaard

    2013-01-01

    Barley (Hordeum vulgare) is an important cereal grain that is used in a range of products for animal and human consumption. Crop yield and seed quality has been optimized during decades by plant breeding programs supported by biotechnology and molecular biology techniques. The recently completed...

  15. N2O emission from organic barley cultivation as affected by green manure management

    Directory of Open Access Journals (Sweden)

    P. Dörsch

    2012-07-01

    Full Text Available Legumes are an important source of nitrogen in stockless organic cereal production. However, substantial amounts of N can be lost from legume-grass leys prior to or after incorporation as green manure (GM. Here we report N2O emissions from a field experiment in SE Norway exploring different green manure management strategies: mulching versus removal of grass-clover herbage during a whole growing season and return as biogas residue to a subsequent barley crop. Grass-clover ley had small but significantly higher N2O emissions as compared with a non-fertilised cereal reference during the year of green manure (GM production in 2009. Mulching of herbage induced significantly more N2O emission (+0.37 kg N2O-N ha−1 throughout the growing season than removing herbage. In spring 2010, all plots were ploughed (with and without GM and sown with barley, resulting in generally higher N2O emissions than during the previous year. Application of biogas residue (60 kg NH4+-N + 50 kg organic N ha−1 before sowing did not increase emissions neither when applied to previous ley plots nor when applied to previously unfertilised cereal plots. Ley management (mulching vs. removing biomass in 2009 had no effect on N2O emissions during barley production in 2010. In general, GM ley (mulched or harvested increased N2O emissions relative to a cereal reference with low mineral N fertilisation (80 kg N ha−1. Based on measurements covering the growing season 2010, organic cereal production emitted 95 g N2O-N kg−1 N yield in barley grain, which was substantially higher than in the cereal reference treatment with 80 kg mineral N fertilisation (47 g N2O-N kg−1 N yield in barley grain.

  16. Whole Grains: Hearty Options for a Healthy Diet

    Science.gov (United States)

    ... sizes, from large kernels of popcorn to small quinoa seeds. Whole grains. These grains are either present ... with whole-wheat versions. Replace white rice with quinoa, brown rice, wild rice, barley or bulgur. Feature ...

  17. Rapid cultivar identification of barley seeds through disjoint principal component modeling.

    Science.gov (United States)

    Whitehead, Iain; Munoz, Alicia; Becker, Thomas

    2017-01-01

    Classification of barley varieties is a crucial part of the control and assessment of barley seeds especially for the malting and brewing industry. The correct classification of barley is essential in that a majority of decisions made regarding process specifications, economic considerations, and the type of product produced with the cereal are made based on the barley variety itself. This fact combined with the need to promptly assess the cereal as it is delivered to a malt house or production facility creates the need for a technique to quickly identify a barley variety based on a sample. This work explores the feasibility of differentiating between barley varieties based on the protein spectrum of barley seeds. In order to produce a rapid analysis of the protein composition of the barley seeds, lab-on-a-chip micro fluid technology is used to analyze the protein composition. Classification of the barley variety is then made using disjoint principle component models. This work included 19 different barley varieties. The varieties consisted of both winter and summer barley types. In this work, it is demonstrated that this system can identify the most likely barley variety with an accuracy of 95.9% based on cross validation and can screen summer barley with an accuracy of 95.2% and a false positive rate of 0.0% based on cross validation. This demonstrates the feasibility of the method to provide a rapid and relatively inexpensive method to verify the heritage of barley seeds.

  18. Grain growth in thoria and thoria-base fuel pellets (LWBR development program)

    Energy Technology Data Exchange (ETDEWEB)

    Smid, R.J.

    1976-01-01

    The kinetics of grain growth in ThO/sub 2/-base sintered compacts were investigated to determine the cause of a nonuniform microstructural cross section. It was concluded that trace impurities which inhibit continuous grain growth at the pellet interior were removed by vaporization at the pellet exterior. This resulted in relatively normal grain growth at the pellet surface and discontinuous grain growth at the pellet interior. Calcining the starting ThO/sub 2/ powder to a slightly higher temperature removed inhibiting impurities but also decreased the driving force for grain growth by reducing the surface area of the powder. Mixing high and low temperature calcined ThO/sub 2/ resulted in improved grain growth. Increased oxygen partial pressure and temperature during sintering increased grain boundary mobility in spite of the inhibiting impurity. The specific inhibiting impurity was not isolated during this investigation.

  19. Grain growth in thoria and thoria-base fuel pellets (LWBR development program)

    International Nuclear Information System (INIS)

    Smid, R.J.

    1976-01-01

    The kinetics of grain growth in ThO 2 -base sintered compacts were investigated to determine the cause of a nonuniform microstructural cross section. It was concluded that trace impurities which inhibit continuous grain growth at the pellet interior were removed by vaporization at the pellet exterior. This resulted in relatively normal grain growth at the pellet surface and discontinuous grain growth at the pellet interior. Calcining the starting ThO 2 powder to a slightly higher temperature removed inhibiting impurities but also decreased the driving force for grain growth by reducing the surface area of the powder. Mixing high and low temperature calcined ThO 2 resulted in improved grain growth. Increased oxygen partial pressure and temperature during sintering increased grain boundary mobility in spite of the inhibiting impurity. The specific inhibiting impurity was not isolated during this investigation

  20. Nutrient utilization and manure P excretion in growing pigs fed corn-barley-soybean based diets supplemented with microbial phytase.

    Science.gov (United States)

    Emiola, Adewale; Akinremi, Oluwole; Slominski, Bogdan; Nyachoti, C Martin

    2009-02-01

    The effect of high levels of microbial phytase supplementation in diets for growing pigs was studied in a 2-week performance and nutrient digestibility trial involving 28 growing pigs weighing 16.4 +/- 1.06 (mean +/- SD) kg. Seven corn-barley-soybean meal-based diets consisting of a positive control (PC) formulated to meet or exceed NRC nutrient requirements; a negative control (NC) with non-phytate P reduced by 0.1% unit from NRC requirement and fed without or with 500 or 1000 U/kg; a doubled negative control (DNC) with no added inorganic P and fed without or with 2000 or 4000 U/kg. Chromic oxide was added as an indigestible marker and all diets were fed as mash. Pigs fed the PC diet had a higher P digestibility compared with those fed the NC (P DNC (P DNC diet resulted in linear (P DNC diets. Apparent total tract digestibility of N, OM and DM were higher (P DNC diet, but not the NC diet (P DNC diet resulted in a linear increase (P DNC diets linearly decreased fecal P (P DNC diets (P < 0.05). The results of this study show that complete removal of inorganic P from growing pig diets coupled with phytase supplementation improves digestibility and retention of P and N, thus reducing manure P excretion without any negative effect on pig performance.

  1. Regrowth in Barley (Hordeum vulgare L.) and Rye (Secale cereale L.)

    DEFF Research Database (Denmark)

    Christiansen, J L; Jørgensen, Johannes Ravn; Jørnsgård, B

    1998-01-01

    Regrowth after cutting at four development stages, from heading to grain maturity, was investigated in a pot experiment containing three rye and four barley varieties (including 2 Hordeum spontaneum lines). Regrowth in the barley varieties decreased strongly from heading to grain maturity. Rye...

  2. Nitric oxide contributes both to papilla-based resistance and the hypersensitive response in barley attacked by Blumeria graminis f. sp. hordei.

    Science.gov (United States)

    Prats, Elena; Mur, Luis A J; Sanderson, Ruth; Carver, Timothy L W

    2005-01-01

    SUMMARY Nonspecific penetration resistance due to papilla formation and race-specific hypersensitive response (HR) can both contribute to Blumeria graminis resistance in barley. Some effective papillae form even in the susceptible cv. Pallas and the isoline P01 carries the additional Mla1 allele conditioning HR. The NO-specific stain DAF-2DA (4,5-diaminofluorescein-2-diacetate) revealed a transient NO generation burst commencing 10 h after inoculation (h.a.i.) in close association with sites of papilla formation in both barley lines. In P01 a burst of NO production throughout some attacked cells was initiated around 10-12 h.a.i. and this preceded whole-cell autofluorescence indicative of HR. The specificity of DAF-2DA staining was demonstrated by the suppression of staining following application of the NO scavenger C-PTIO (1H-imidazol-1-yloxy-2-(4-carboxyphenyl)-4,5-dihydro-4,4,5,5-tetramethyl-3-oxide). In addition, C-PTIO application increased penetration frequencies in both barley lines, indicating a role for NO in papilla-based resistance. Furthermore, C-PTIO application slightly delayed HR in P01 whereas, conversely, application of an NO donor, sodium nitroprusside, slightly accelerated HR in P01 and increased cell death frequency in Pallas. Thus, NO generation is one of the earliest responses of barley epidermal cell defence against B. graminis attack and may be important in both the initiation and the development of effective papillae and cell death due to HR.

  3. The Effect of Fungicides for Seed Treatment on Germination of Barley

    Directory of Open Access Journals (Sweden)

    Vesna Stevanović

    2009-01-01

    Full Text Available The application of chemicals, such as fungicides for seed treatment, is one of the most reliable and perhaps most efficient measures for integrated preservation of crops, and its practicing has become a legal obligation for all seed producers. This investigation was carried out in the laboratory for seed quality and phytopathology of the Small Grains Research Center in Kragujevac. The objective was to establish the effect of fungicides on germination energy and seed germinability (determined after treatments. Two varieties were tested due to a possibility of specific sensitivities of some varieties, so that the results acquired on one variety would not necessarily be valid for another one. Fungicides based on active ingredients from the triasol chemical group had different effects on the energy of germination of barley seeds. Applying Raxil S040-FS, the average germination of barley seeds was 79.3% for the variety Record, and 91.3% for the Grand variety. The variety Record achieved a lower value than the minimum for barley seed germination (88% stipulated by the Rules on Seed Quality of Agricultural Crops.Regardless of barley type, the product Raxil S040-FS showed a statistically significant effect on the number of atypical seedlings and increase in the number of non-germinated seeds, compared to the control.

  4. A model for grain growth based on the novel description of dendrite shape

    Directory of Open Access Journals (Sweden)

    O. Wodo

    2007-12-01

    Full Text Available We use novel description of dendritic shape in the micro solid phase growth model. The model describes evolution of both primary solid solution dendrite and eutectic that forms between arms and grains in the last stage of solidification. Obtained results show that our approach can be used in grain growth model to determine more reliable eutectic distribution. In the paper no kinetics connected with the eutectic transformation is taken into account. However, this does not affect the eutectic distribution because at the beginning of eutectic reaction all liquid phase was assumed to fully transform into eutectic. Results for solid phase growth model based on this description are presented. The obtained results of eutectic distribution are especially important in the hypoeutectic alloy solidification case, where the eutectic grains grow between formed solid solution grains. Thus, the distribution of solid solution grain becomes crucial due to its influence on the delay in solid fraction increase of eutectic grains.

  5. The barley grain thioredoxin system - an update

    DEFF Research Database (Denmark)

    Hägglund, Per; Björnberg, Olof; Navrot, Nicolas

    2013-01-01

    Thioredoxin (Trx) reduces disulfide bonds and play numerous important functions in plants. In cereal seeds, cytosolic h-type Trx facilitates the release of energy reserves during the germination process and is recycled by NADPH-dependent Trx reductase. This review presents a summary of the resear...

  6. An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers

    Czech Academy of Sciences Publication Activity Database

    Munoz-Amatriain, M.; Moscou, M. J.; Bhat, P. R.; Bartoš, Jan; Suchánková, Pavla; Šimková, Hana; Endo, T. R.; Fenton, R. D.; Lonardi, S.; Castillo, A. M.; Doležel, Jaroslav; Close, T. J.

    2011-01-01

    Roč. 4, č. 3 (2011), s. 238-249 ISSN 1940-3372 R&D Projects: GA MŠk(CZ) LC06004; GA MŠk ED0007/01/01 Institutional research plan: CEZ:AV0Z50380511 Keywords : Chromosomes sorting * Barley * Nucleotide polymorphism Subject RIV: EB - Genetics ; Molecular Biology

  7. HPLC bottom-up MS-based proteomics for mapping of specific proteins in several European spring barley varieties

    Czech Academy of Sciences Publication Activity Database

    Flodrová, Dana; Benkovská, Dagmar; Laštovičková, Markéta; Bobálová, Janette

    2015-01-01

    Roč. 73, č. 1 (2015), s. 71-77 ISSN 0361-0470 R&D Projects: GA ČR(CZ) GPP503/12/P395 Institutional support: RVO:68081715 Keywords : barley * gel electrophoresis * MALDI - TOF / TOF MS * protein profile * RP liquid chromatography Subject RIV: CB - Analytical Chemistry, Separation Impact factor: 0.492, year: 2015

  8. HPLC bottom-up MS-based proteomics for mapping of specific proteins in several European spring barley varieties

    Czech Academy of Sciences Publication Activity Database

    Flodrová, Dana; Benkovská, Dagmar; Laštovičková, Markéta; Bobálová, Janette

    2015-01-01

    Roč. 73, č. 1 (2015), s. 71-77 ISSN 0361-0470 R&D Projects: GA ČR(CZ) GPP503/12/P395 Institutional support: RVO:68081715 Keywords : barley * gel electrophoresis * MALDI-TOF/TOF MS * protein profile * RP liquid chromatography Subject RIV: CB - Analytical Chemistry, Separation Impact factor: 0.492, year: 2015

  9. Laboratory-based grain-shape models for simulating dust infrared spectra

    NARCIS (Netherlands)

    Mutschke, H.; Min, M.; Tamanai, A.

    2009-01-01

    Context. Analysis of thermal dust emission spectra for dust mineralogy and physical grain properties depends on comparison spectra, which are either laboratory-measured infrared extinction spectra or calculated extinction cross sections based on certain grain models. Often, the agreement between

  10. Hardware-based image processing for high-speed inspection of grains

    Science.gov (United States)

    A high-speed, low-cost, image-based sorting device was developed to detect and separate grains with slight color differences and small defects on grains The device directly combines a complementary metal–oxide–semiconductor (CMOS) color image sensor with a field-programmable gate array (FPGA) which...

  11. Winter barley mutants created in the Ukraine

    International Nuclear Information System (INIS)

    Zayats, O.M.

    2001-01-01

    Full text: Increasing fodder and protein production is one of the objectives of the development of agriculture in Ukraine. Higher productivity of fodder crops, due to new highly productive varieties, is the means to meet this aim. Winter barley is an important crop for fodder purposes. The climate of the Ukraine is favourable for growing this crop. The areas used for the growth of winter barley are however, small (500,000-550,000 ha) and there is a shortage of good quality varieties. The main aim of the work was therefore to create new varieties of highly productive winter barley, of good quality. The new varieties and mutation lines of winter barley were created under the influence of water solutions of N-nitroso-N-methylurea (NMH - 0,012, 0,005%), N-nitroso-N-ethylurea (NEH - 0,05; 0.025; 0,012%) ethyleneimine (EI - 0,02; 0,01; 0,005%) on winter barley seeds of the varieties of local and foreign selections. On the basis of many years of investigations (1984-94) the following mutations were described: hard-grained, winter-hardiness, earliness, middle-maturity, late-maturity, wide and large leaves, narrow leaves, multinodal, great number of leaves, great number of flowers, strong stem (lodging resistant), tallness, semi-dwarfness, dwarfness, and high productivity. Particularly valuable are mutants with high productivity of green bulk. Their potential yield is 70 t/ha. As a result of the work two varieties of winter barley 'Shyrokolysty' and 'Kormovy' were released into the State register of plant varieties of the Ukraine. The other valuable mutant genotypes are used in cross breeding programmes. (author)

  12. Efect of organic barley-based crop rotations on soil nutrient balance in a semiarid environment for a 16-year experiment

    Science.gov (United States)

    Meco, Ramón; María Moreno, Marta; Lacasta, Carlos; Moreno, Carmen

    2013-04-01

    In natural ecosystems with no percolating moisture regime, the biogeochemical cycle can be considered a closed system because the nutrients extracted by the roots will be returned to the soil after a certain time. In organic farming, a cycle model as close as possible is taken as a guideline, but we have to consider that unlike natural ecosystems, where most of the nutrients remain in the cycle, the agrosystems are open cycles. To achieve a sustainable fertility of the soil, the soil nutrient levels, the extractions according to the expected crop yields and the export refunds in the form of crop residues, biological nitrogen fixation, green manure or compost will have to be determined. Nutrient balance should be closed with external inputs, always avoiding to be a source of negative impacts on the environment. In organic farming without exogenous inputs, the effect of the crop rotations is much more noticeable in the nutrient balance than in the conventional farming fields which every year receive inputs of nutrients (nitrogen, phosphorus and potassium) in the form of chemical fertilizers. The most extractive crop rotations are those that produce a greater decrease in soil reserves, and in these cases exogenous inputs to maintain sustainability should be considered; however, in less extractive crop rotations, extractions can be restored by the edaphogenesis processes. In this work, soil organic matter, phosphorus and potassium balances were analyzed in different organic barley-based crop rotations (barley monoculture [b-b] and in rotation with vetch for hay production [B-Vh], vetch as green manure [B-Vm], sunflower [B-S], chickpea [B-C] and fallow [B-F]) in clay soils under a semiarid environment ("La Higueruela" Experimental Farm, Santa Olalla, Toledo, central Spain) over a 16 year period. Additionally, barley monoculture in conventional farming [B-B] was included. In the organic system, the fertilization involved the barley straw in all rotations, the sunflower

  13. Microscopic derivation of particle-based coarse-grained dynamics

    Science.gov (United States)

    Izvekov, Sergei

    2013-04-01

    In this paper we revisit the derivation of equations of motion for coarse-grained (CG) particles from the microscopic Hamiltonian dynamics of the underlying atomistic system in equilibrium. The derivation is based on the projection operator method and time-convolution equation. We demonstrate that due to the energy exchange between CG and intraparticle phase space coordinates in the microscopic system, the choice of projection operator is not unique, leading to different CG equations of motion that have the form of the nonlinear generalized Langevin equation (GLE). We derive the idempotence properties for the projection operators along the system trajectories and show that these properties result in streaming terms of the respective GLEs that are conservative forces and allow the expression of the non-conservative forces explicitly through thermodynamic averages, which can be measured from the microscopic simulations. The difference between GLEs that are presented herein lies in how the non-conservative forces are partitioned into dissipative and projected contributions. We compute the projected force and analyze conditions under which the projected (stochastic) force is orthogonal to (uncorrelated with) the momenta of CG particles, therefore justifying a transition to a framework of stochastic differential equations. We show that a position- and momentum-independent memory function appears only if the projected force is fully decoupled from the past CG positions and momenta, respectively. In the case of non-vanishing correlations between the projected force and the CG coordinates in past times, we derive explicitly the position- and momentum-dependent memory function in a form of projection onto a space spanned by N-order Hermite polynomials. The expressions presented herein can be used to construct a hierarchy of thermodynamically consistent CG models with momentum-dependent memory functions. They can also be used to design computational schemes for obtaining the

  14. Misorientation related microstructure at the grain boundary in a nickel-based single crystal superalloy

    International Nuclear Information System (INIS)

    Huang, Ming; Zhuo, Longchao; Liu, Zhanli; Lu, Xiaogang; Shi, Zhenxue; Li, Jiarong; Zhu, Jing

    2015-01-01

    The mechanical properties of nickel-based single crystal superalloys deteriorate with increasing misorientation, thus the finished product rate of the casting of single crystal turbine airfoils may be reduced due to the formation of grain boundaries especially when the misorientation angle exceeds to some extent. To this day, evolution of the microstructures at the grain boundaries with misorientation and the relationship between the microstructures and the mechanical properties are still unclear. In this work a detailed characterization of the misorientation related microstructure at the grain boundary in DD6 single crystal superalloy has been carried out using scanning electron microscopy (SEM) and transmission electron microscopy (TEM) techniques; the elemental distribution at the grain boundaries has been analyzed by energy dispersive (EDS) X-ray mapping; and the effect of precipitation of μ phases at the grain boundary on the mechanical property has been evaluated by finite element calculation. It is shown that the proportion of γ phase at the grain boundaries decreases, while the proportion of γ′ phase at the grain boundaries increases with increasing misorientation; the μ phase is precipitated at the grain boundaries when the misorientation angle exceeds about 10° and thus it could lead to a dramatic deterioration of the mechanical properties, as well as that the enrichment of Re and W gradually disappears as the misorientation angle increases. All these factors may result in the degradation of the mechanical properties at the grain boundaries as the misorientation increases. Furthermore, the finite element calculation confirms that precipitation of μ phases at the grain boundary is responsible for the significant deterioration of the mechanical properties when the misorientation exceeds about 10°. This work provides a physical imaging of the microstructure for understanding the relationship between the mechanical properties and the misorientation

  15. Secretomics identifies Fusarium graminearum proteins involved in the interaction with barley and wheat

    DEFF Research Database (Denmark)

    Yang, Fen; Jensen, Jens D.; Svensson, Birte

    2012-01-01

    or wheat flour as the sole nutrient source to mimic the host–pathogen interaction. A gel‐based proteomics approach was employed to identify the proteins secreted into the culture medium. Sixty‐nine unique fungal proteins were identified in 154 protein spots, including enzymes involved in the degradation......Fusarium graminearum is a phytopathogenic fungus primarily infecting small grain cereals, including barley and wheat. Secreted enzymes play important roles in the pathogenicity of many fungi. In order to access the secretome of F. graminearum, the fungus was grown in liquid culture with barley...... of cell walls, starch and proteins. Of these proteins, 35% had not been identified in previous in planta or in vitro studies, 70% were predicted to contain signal peptides and a further 16% may be secreted in a nonclassical manner. Proteins identified in the 72 spots showing differential appearance...

  16. Spring Barley Yield Parameters after Lignite, Sodium Humate and Nitrogen Utilization

    Directory of Open Access Journals (Sweden)

    Kováčik Peter

    2016-10-01

    Full Text Available The existence of a small number of publications dealing with the impact of solid sodium humate and lignite on the quantity and quality of grown crops was the reason for establishing the field experiment. The objective of this experiment was to detect the impact of solid lignite and solid sodium humate on the quantity and quality of spring barley yield. These substances were applied into the soil either independently or along with nitrogen fertiliser. The next objective was to determine the impact of foliar application of sodium humate water solution applied either independently or along with nitrogen fertiliser on the quality and quantity of spring barley yield. The achieved results showed that the autumn application of solid lignite and the presowing application of solid sodium humate into the soil tended to decrease the yield of both grain and straw of spring barley, crude protein content in grain, proportion of the first-class grains and volume weight of grain, whereas the impact of humate was more negative. Lignite and sodium humate in the solid form should be used along with nitrogen fertiliser. The application of sodium humate in liquid form during the growth season of barley tended to increase the yield of both grain and straw. The joint application of nitrogen and liquid sodium humate during the growth season of barley increased the grain yield of barley significantly. A lower dose of nitrogen, applied during the growth season of barley (growth season BBCH 23, increased the grain yield of barley considerably more than a higher N dose, applied into the soil before barley sowing.

  17. BARLEY BALANCE SHEET IN ROMANIA

    OpenAIRE

    Dragoş Mihai MEDELETE; Radu Lucian PÂNZARU

    2013-01-01

    Barley is one of the most important cereal grown in Romania, after corn and wheat. This is based, at least on considerations of cultivated area (413.4 thousand ha - average 2007-2009), but also because of the multiple uses it may have (Food, feed, industrial raw materials, etc.). Presentation of food balance we consider interesting in terms of supply and demand components: production, imports, stocks, exports, seeds, feed consumption, industrial raw materials, food and other useslosses. On th...

  18. Implementation of biochemical screening to improve baking quality of barley

    DEFF Research Database (Denmark)

    Vincze, Éva; Dionisio, Giuseppe; Aaslo, Per

    2011-01-01

    Barley (Hordeum vulgare) has the potential to offer considerable human nutritional benefits, especially as supplement to wheat-based breads. Under current commercial baking conditions it is not possible to introduce more that 20% barley flour to the wheat bread without negative impact on the phys......Barley (Hordeum vulgare) has the potential to offer considerable human nutritional benefits, especially as supplement to wheat-based breads. Under current commercial baking conditions it is not possible to introduce more that 20% barley flour to the wheat bread without negative impact...... on the physical chemical properties of the bread products due to the poor baking properties of barley flour. As a consequence, the nutritional advantages of barley are not fully exploited. The inferior leavening and baking properties of barley can, in part, be attributed to the physical properties of the storage...... proteins. Changing the storage protein composition can lessen this problem. Our working hypothesis was that exploiting the substantial genetic variation within the gene pool for storage proteins could enable improving the baking qualities of barley flour. We characterised forty-nine barley cultivars...

  19. Application of genotyping-by-sequencing on semiconductor sequencing platforms: a comparison of genetic and reference-based marker ordering in barley.

    Science.gov (United States)

    Mascher, Martin; Wu, Shuangye; Amand, Paul St; Stein, Nils; Poland, Jesse

    2013-01-01

    The rapid development of next-generation sequencing platforms has enabled the use of sequencing for routine genotyping across a range of genetics studies and breeding applications. Genotyping-by-sequencing (GBS), a low-cost, reduced representation sequencing method, is becoming a common approach for whole-genome marker profiling in many species. With quickly developing sequencing technologies, adapting current GBS methodologies to new platforms will leverage these advancements for future studies. To test new semiconductor sequencing platforms for GBS, we genotyped a barley recombinant inbred line (RIL) population. Based on a previous GBS approach, we designed bar code and adapter sets for the Ion Torrent platforms. Four sets of 24-plex libraries were constructed consisting of 94 RILs and the two parents and sequenced on two Ion platforms. In parallel, a 96-plex library of the same RILs was sequenced on the Illumina HiSeq 2000. We applied two different computational pipelines to analyze sequencing data; the reference-independent TASSEL pipeline and a reference-based pipeline using SAMtools. Sequence contigs positioned on the integrated physical and genetic map were used for read mapping and variant calling. We found high agreement in genotype calls between the different platforms and high concordance between genetic and reference-based marker order. There was, however, paucity in the number of SNP that were jointly discovered by the different pipelines indicating a strong effect of alignment and filtering parameters on SNP discovery. We show the utility of the current barley genome assembly as a framework for developing very low-cost genetic maps, facilitating high resolution genetic mapping and negating the need for developing de novo genetic maps for future studies in barley. Through demonstration of GBS on semiconductor sequencing platforms, we conclude that the GBS approach is amenable to a range of platforms and can easily be modified as new sequencing

  20. Application of genotyping-by-sequencing on semiconductor sequencing platforms: a comparison of genetic and reference-based marker ordering in barley.

    Directory of Open Access Journals (Sweden)

    Martin Mascher

    Full Text Available The rapid development of next-generation sequencing platforms has enabled the use of sequencing for routine genotyping across a range of genetics studies and breeding applications. Genotyping-by-sequencing (GBS, a low-cost, reduced representation sequencing method, is becoming a common approach for whole-genome marker profiling in many species. With quickly developing sequencing technologies, adapting current GBS methodologies to new platforms will leverage these advancements for future studies. To test new semiconductor sequencing platforms for GBS, we genotyped a barley recombinant inbred line (RIL population. Based on a previous GBS approach, we designed bar code and adapter sets for the Ion Torrent platforms. Four sets of 24-plex libraries were constructed consisting of 94 RILs and the two parents and sequenced on two Ion platforms. In parallel, a 96-plex library of the same RILs was sequenced on the Illumina HiSeq 2000. We applied two different computational pipelines to analyze sequencing data; the reference-independent TASSEL pipeline and a reference-based pipeline using SAMtools. Sequence contigs positioned on the integrated physical and genetic map were used for read mapping and variant calling. We found high agreement in genotype calls between the different platforms and high concordance between genetic and reference-based marker order. There was, however, paucity in the number of SNP that were jointly discovered by the different pipelines indicating a strong effect of alignment and filtering parameters on SNP discovery. We show the utility of the current barley genome assembly as a framework for developing very low-cost genetic maps, facilitating high resolution genetic mapping and negating the need for developing de novo genetic maps for future studies in barley. Through demonstration of GBS on semiconductor sequencing platforms, we conclude that the GBS approach is amenable to a range of platforms and can easily be modified as new

  1. Influence of Temperature on the Extractibility of Polysaccharides in Barley

    Directory of Open Access Journals (Sweden)

    Rodica Căpriţă

    2011-10-01

    Full Text Available Barley contains substantial amounts of both soluble and insoluble non-starch polysaccharides (NSP. The main watersoluble NSP in barley are highly viscous β-glucans. Monogastric animals, including humans and birds, cannotsynthesize β-glucanase, and the amount of β-glucanase derived from barley grain and bacteria in the gastrointestinaltract is insufficient to completely hydrolyze β-glucans. In the present investigation, we have studied the influence oftemperature and heating time on the extractibility of soluble polysaccharides in barley. Heating the barley samples at60°C and 80°C before extraction has the effect of lowering the soluble fraction of the polysaccharides. The dynamicviscosity values of water extracts from barley decreased up to 21.68% when heating at 60ºC for 15 minutes, and upto 25.30% when heating at 80ºC for 15 minutes, when the determinations were made immediately after extractseparation. Heating the barley samples for 15 minutes at 80°C deactivates the endogenous hydrolytic enzymes.

  2. Assessing the ratio of leaf carbon to nitrogen in winter wheat and spring barley based on hyperspectral data

    Science.gov (United States)

    Xu, Xin-gang; Gu, Xiao-he; Song, Xiao-yu; Xu, Bo; Yu, Hai-yang; Yang, Gui-jun; Feng, Hai-kuan

    2016-10-01

    The metabolic status of carbon (C) and nitrogen (N) as two essential elements of crop plants has significant influence on the ultimate formation of yield and quality in crop production. The ratio of carbon to nitrogen (C/N) from crop leaves, defined as ratio of LCC (leaf carbon concentration) to LNC (leaf nitrogen concentration), is an important index that can be used to diagnose the balance between carbon and nitrogen, nutrient status, growth vigor and disease resistance in crop plants. Thus, it is very significant for effectively evaluating crop growth in field to monitor changes of leaf C/N quickly and accurately. In this study, some typical indices aimed at N estimation and chlorophyll evaluation were tested to assess leaf C/N in winter wheat and spring barley. The multi-temporal hyperspectral measurements from the flag-leaf, anthesis, filling, and milk-ripe stages were used to extract these selected spectral indices to estimate leaf C/N in wheat and barley. The analyses showed that some tested indices such as MTCI, MCARI/OSAVI2, and R-M had the better performance of assessing C/N for both of crops. Besides, a mathematic algorithm, Branch-and-Bound (BB) method was coupled with the spectral indices to assess leaf C/N in wheat and barley, and yielded the R2 values of 0.795 for winter wheat, R2 of 0.727 for spring barley, 0.788 for both crops combined. It demonstrates that using hyperspectral data has a good potential for remote assessment of leaf C/N in crops.

  3. Effect of substituting soybean meal and canola cake with grain-based dried distillers grains with solubles as a protein source on feed intake, milk production, and milk quality in dairy cows.

    Science.gov (United States)

    Gaillard, C; Sørensen, M T; Vestergaard, M; Weisbjerg, M R; Basar, A; Larsen, M K; Martinussen, H; Kidmose, U; Sehested, J

    2017-10-01

    The growth of the bioethanol industry is leading to an increase in the production of coproducts such as dried distillers grains with solubles (DDGS). Both corn-based DDGS and grain-based DDGS (gDDGS; defined as originating from grain sources such as barley, wheat, triticale, or a mix, excluding corn) appear to be relevant sources of feed and protein for dairy cows. To date, most of the studies investigating DDGS have been performed with corn-based DDGS. The objectives of this study were to determine the effects of the proportion of gDDGS in the diet on feed intake, milk production, and milk quality. The present experiment involved 48 Holstein cows in a replicated 3 × 3 Latin square design with 3 grass-based dietary treatments consisting of 4, 13.5, and 23% gDDGS on a dry matter (DM) basis (L, M, and H, respectively) as a replacement for a concentrate mix. The concentrate mix consisted of soybean meal, canola cake, and beet pulp. Dry matter intake and energy-corrected milk yield were not affected by the proportion of gDDGS in the diet. Daily milk yield decreased with the H diet compared with the L and M diets. The percentage of fat in milk was higher when cows were fed the H diet compared with the L and M diets, whereas milk fat yield was not affected by dietary treatment. The M diet had a higher percentage of protein in milk compared with the L and H diets. Milk protein yield was similar for the L and M diets; however, it decreased for the H diet. Milk taste was not affected by the proportion of gDDGS in the diet or when milk was stored for 7 d. Linoleic acid and conjugated linoleic acid cis-9,trans-11 in milk increased with increasing proportion of gDDGS. To conclude, gDDGS can replace soybean meal and canola cake as a protein source in the diet of dairy cows. Up to 13.5% of the diet may consist of gDDGS without negatively affecting milk production, milk quality, or milk taste. When gDDGS represents 23% of dietary DM, milk production is reduced by 1.6 kg

  4. Computer vision-based method for classification of wheat grains using artificial neural network.

    Science.gov (United States)

    Sabanci, Kadir; Kayabasi, Ahmet; Toktas, Abdurrahim

    2017-06-01

    A simplified computer vision-based application using artificial neural network (ANN) depending on multilayer perceptron (MLP) for accurately classifying wheat grains into bread or durum is presented. The images of 100 bread and 100 durum wheat grains are taken via a high-resolution camera and subjected to pre-processing. The main visual features of four dimensions, three colors and five textures are acquired using image-processing techniques (IPTs). A total of 21 visual features are reproduced from the 12 main features to diversify the input population for training and testing the ANN model. The data sets of visual features are considered as input parameters of the ANN model. The ANN with four different input data subsets is modelled to classify the wheat grains into bread or durum. The ANN model is trained with 180 grains and its accuracy tested with 20 grains from a total of 200 wheat grains. Seven input parameters that are most effective on the classifying results are determined using the correlation-based CfsSubsetEval algorithm to simplify the ANN model. The results of the ANN model are compared in terms of accuracy rate. The best result is achieved with a mean absolute error (MAE) of 9.8 × 10 -6 by the simplified ANN model. This shows that the proposed classifier based on computer vision can be successfully exploited to automatically classify a variety of grains. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  5. Hulled and hull-less barley grains with the genetic trait for low-phytic acid increased the apparent total-tract digestibility of phosphorus and calcium in diets for young swine.

    Science.gov (United States)

    Veum, T L; Raboy, V

    2016-03-01

    A 35-d experiment was conducted using 63 crossbred pigs (35 barrows and 28 gilts) with an initial average BW of 7.0 kg and age of 28 d to evaluate the efficacy of the low-phytic acid (LPA) genetic trait in hulled or hull-less barley in isocaloric diets. Hulled barleys were the normal barley (NB) cultivar Harrington and the near-isogenic LPA mutant 955 (M955) with P availabilities of 36 and 95%, respectively. Hull-less lines were produced by crossing NB and the LPA mutant 422 line with a hull-less line, producing hull-less NB (HNB) and hull-less mutant 422 (HM422) with P availabilities of 41 and 66%, respectively. Pigs were in individual metabolism cages or pens for Phase 1 (d 0 to 14) and Phase 2 (d 14 to 35). Diets defined as NB, HNB, HM422, or M955 with no added inorganic P (iP) had available P (aP) concentrations of 0.27, 0.28, 0.35, and 0.40% for Phase 1 and 0.15, 0.17, 0.23, and 0.31% for Phase 2, respectively. Only diet M955 was adequate in aP. Therefore, iP was added to the P-deficient diets to make diets NB + iP, HNB + iP, and HM422 + iP with aP equal to that in diet M955. Overall (d 0 to 35), ADG and G:F were greater ( absorbed greater ( + iP that was equal to diet M955 in aP. Therefore, LPA barley, especially M955 with 95% aP, will reduce the use of iP in swine diets, reduce P pollution from swine manure, and support the goal of achieving global P sustainability.

  6. Voronoi-Based DEM Simulation Approach for Sandstone Considering Grain Structure and Pore Size

    Science.gov (United States)

    Li, Jun; Konietzky, Heinz; Frühwirt, Thomas

    2017-10-01

    This paper presents a new procedure to create numerical models considering grain shape and size as well as pore size in an explicit and stochastic equivalent manner. Four shape factors are introduced to reproduce shape and size of grains and pores. Thin sections are used to analyze grain shape and pore size of rock specimen. First, a particle-based numerical model is set up by best fitted clumps from a shape library according to thin sections. Finally, an equivalent Voronoi-based discrete element model is set up based on the superimposed particle model. Uniaxial compression and tensile tests are simulated for validation. Both tests indicate that grain boundaries and pores provide preferred paths of weakness for crack propagation, but they also reveal significant differences in terms of intra- and inter-granular fracturing.

  7. Evaluation of Pure Aluminium Inoculated with Varying Grain Sizes of an Agro-waste based Inoculant

    Directory of Open Access Journals (Sweden)

    Adeyemi I. Olabisi

    2017-04-01

    Full Text Available Pure Aluminium and its alloy are widely utilized in Engineering and Industrial applications due to certain significant properties such as softness, ductility, corrosion resistance, and high electrical conductivity which it possesses. Addition of an agro-waste based grain refiner to the melt can alter the characteristics positively or negatively. Therefore, the aim of this paper is to investigate the inoculating capability of an agro-waste based inoculant and the effect of adding varying sizes of its grains on some of the properties of pure aluminium after solidification. The beneficial outcome of this investigation would enhance the economic value of the selected agro-waste and also broaden the applications of aluminium in Engineering. The assessed properties include; microstructure, micro hardness, ductility, and tensile strength. The agro-waste used as the grain refiner is pulverised cocoa bean shells (CBS. Three sets of test samples were produced using dry sand moulding process, with each melt having a specified grain size of the inoculant added to it (150, 225 and 300microns respectively. Ladle inoculation method was adopted. The cast samples after solidification were machined to obtain various shapes/sizes for the different analysis. The microstructural examination showed that the mechanical properties are dependent on the matrix as the aluminium grains became more refined with increasing grain size of the inoculant. I.e. Due to increasing grain size of the inoculant, the micro hardness increased (56, 61, 72HB as the aluminium crystal size became finer. Meanwhile, the tensile strength (284, 251, 223N/mm2 and ductility (1.82, 0.91, 0.45%E decreased as grain size of the inoculant increased. The overall results showed that the used agro-waste based inoculant has the capability of refining the crystal size of pure aluminium as its grain size increases. This will make the resulting aluminium alloy applicable in areas where hardness is of

  8. Fine-grained hodoscopes based on scintillating optical fibers

    International Nuclear Information System (INIS)

    Borenstein, S.R.; Strand, R.C.

    1981-01-01

    In order to exploit the high event rates at ISABELLE, it will be necessary to have fast detection with fine spatial resolution. The authors are currently constructing a prototype fine-grained hodoscope, the elements of which are scintillating optical fibers. The fibers have been drawn from commercially available plastic scintillator which has been clad with a thin layer of silicone. So far it has been demonstrated with one mm diameter fibers, that with a photodetector at each end, the fibers are more than 99% efficient for lengths of about 60 cm. The readout will be accomplished either with small diameter photomultiplier tubes or avalanche photodiodes used either in the linear or Geiger mode. The program of fiber development and evaluation is described. The status of the APD as a readout element is discussed, and an optical encoding readout scheme is described for events of low multiplicity

  9. Impact of non-selective fungicides on the growth and production of ochratoxin A by Aspergillus ochraceus and A. carbonarius in barley-based medium.

    Science.gov (United States)

    Mateo, Eva M; Valle-Algarra, F M; Mateo-Castro, R; Jimenez, M

    2011-01-01

    The aim of this study was to assess the influence of the non-selective fungicides mancozeb, copper oxychloride, and sulfur on the growth and capability for producing ochratoxin A (OTA) of ochratoxigenic isolates of Aspergillus carbonarius and A. ochraceus in barley-based medium. Lag phases and growth rates were determined for each fungicide at different doses, at 15°C and 25°C and at 0.97 a(w). Mancozeb at 40 mg l(-1 )inhibited fungal growth and provided lag phases >24 days at 10-20 mg l(-1) and 15°C. OTA was observed only at 25°C and doses Sulfur was inhibitory or provided large lag phases at 5-8 g l(-1) (at 15°C) while at 25°C growth took place even at 8 g l(-1), although OTA levels were low or undetectable. The antifungal activity decreased in the order mancozeb > copper oxychloride > sulfur, and was lower at 25°C than at 15°C. OTA accumulation was affected by the type of fungicide, dose, temperature and time. The efficacy of these fungicides on the growth of A. carbonarius and A. ochraceus and OTA production in barley-based medium is assessed for the first time.

  10. The presence of inositol phosphates in gastric pig digesta is affected by time after feeding a nonfermented or fermented liquid wheat- barley-based diet

    DEFF Research Database (Denmark)

    Blaabjerg, Karoline; Jørgensen, H.; Tauson, Anne-Helene

    2011-01-01

    increased the degradation of gastric InsP(6). However, considerable amounts of intact InsP(6) still passed into the small intestine because of a shortage of time for InsP(6) degradation in the stomach. Therefore, to increase the apparent digestibility of plant P in dry wheat- and barley-based diets...... collection of gastric digesta. For each pig, the digesta was collected once daily at 1, 2, 3, or 5 h after feeding the morning meal. A basal wheat- and barley-based diet was steam-pelleted at 90°C. The dietary treatments were a nonfermented basal diet (NF-BD), the NF-BD with microbial phytase (750 phytase......The objective was to quantify the retention of digesta and evaluate the degradation of phytate or inositol hexakisphosphate (InsP(6)) and lower inositol phosphates (InsP(5), InsP(4), InsP(3), and InsP(2)) in the stomach at different times after feeding pigs a fermented liquid diet with microbial...

  11. The Genetic Architecture of Barley Plant Stature

    Science.gov (United States)

    Alqudah, Ahmad M.; Koppolu, Ravi; Wolde, Gizaw M.; Graner, Andreas; Schnurbusch, Thorsten

    2016-01-01

    Plant stature in temperate cereals is predominantly controlled by tillering and plant height as complex agronomic traits, representing important determinants of grain yield. This study was designed to reveal the genetic basis of tillering at five developmental stages and plant height at harvest in 218 worldwide spring barley (Hordeum vulgare L.) accessions under greenhouse conditions. The accessions were structured based on row-type classes [two- vs. six-rowed] and photoperiod response [photoperiod-sensitive (Ppd-H1) vs. reduced photoperiod sensitivity (ppd-H1)]. Phenotypic analyses of both factors revealed profound between group effects on tiller development. To further verify the row-type effect on the studied traits, Six-rowed spike 1 (vrs1) mutants and their two-rowed progenitors were examined for tiller number per plant and plant height. Here, wild-type (Vrs1) plants were significantly taller and had more tillers than mutants suggesting a negative pleiotropic effect of this row-type locus on both traits. Our genome-wide association scans further revealed highly significant associations, thereby establishing a link between the genetic control of row-type, heading time, tillering, and plant height. We further show that associations for tillering and plant height are co-localized with chromosomal segments harboring known plant stature-related phytohormone and sugar-related genes. This work demonstrates the feasibility of the GWAS approach for identifying putative candidate genes for improving plant architecture. PMID:27446200

  12. Cereal bioengineering: Amylopectin-free and hyper-phosphorylated barley starch

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Shaik, Shahnoor Sultana; Jensen, Susanne Langgård

    Barley lines producing grains with either amylopectin-free or hyper-phosphorylated starches were made by transgenic methods. Cereals producing these kind of starches have not been reported before. Amylopectin-free barley was generated by simultaneously silencing the three genes encoding the starch...... and T1) of transgenic grains was tenfold higher than from vector control and wild type grains. Amylose content was not affected in hyper-phosphorylated grains. Hyper-phosphorylated starch granules had several pores on the surfaces, similar to pores seen on enzymatically semi-degraded granules...

  13. Cereal bioengineering: Amylopectin-free and hyper-phosphorylated barley starch

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Shaik, Shahnoor Sultana; Jensen, Susanne Langgård

    2011-01-01

    Barley lines producing grains with either amylopectin-free or hyper-phosphorylated starches were made by transgenic methods. Cereals producing these kind of starches have not been reported before. Amylopectin-free barley was generated by simultaneously silencing the three genes encoding the starch...... and T1) of transgenic grains was tenfold higher than from vector control and wild type grains. Amylose content was not affected in hyper-phosphorylated grains. Hyper-phosphorylated starch granules had several pores on the surfaces, similar to pores seen on enzymatically semi-degraded granules...

  14. Cisgenic barley with improved phytase activity

    DEFF Research Database (Denmark)

    Holme, Inger; Dionisio, Giuseppe; Brinch-Pedersen, Henrik

    2010-01-01

    copies of the genomic phytase gene and the selection gene to identify segregation between the two genes. Presently, we have identified two cisgenic T1 plants without vector backbone and selection gene but with an extra copy of the genomic phytase gene....... are accordingly very similar to those generated by conventional breeding. The cisgenesis concept allows for the introduction of extra gene copies of a particular gene to accentuate the trait. We are using a barley purple acid phosphatase expressed during grain filling as candidate gene for cisgenesis. A genomic...... barley lambda library has been used to isolate the genomic clone of this phytase including 2.3 kb of the promoter region and 600 bp of the terminator region. The clone has been inserted into a cisgenic Agrobacterium vector where both the gene of interest and the selection gene are flanked by their own T...

  15. Registration of Guta Barley (Hordeium vulgare L.) Variety for Bale ...

    African Journals Online (AJOL)

    Thus, the variety has shown high mean grain yield and relatively stable across locations and years. ... On the other hand, as observed during evaluation Guta possess resistance or tolerance to barley shoot fly insect than Shage; and exhibit compensatory growth after shootfly damage and these needs further research.

  16. Registration of Food Barley (Hordeum vulgare L.) Variety HB 1307 ...

    African Journals Online (AJOL)

    Six-rowed food type barley, HB 1307, was developed by Holetta Agricultural Research Center (HARC) from a cross between a landrace line and exotic germplasm (Awra gebs-1 x IBON93/91) and released in 2006 for mid and high altitude areas. The three consecutive years\\' (2002-2004) tests proved its superiority in grain ...

  17. Influence of ultrasonic stimulation on the germination of barley seed ...

    African Journals Online (AJOL)

    In this study, the influence of ultrasonic stimulation was investigated on the germination of barley and alpha-amylase activity grains in the dry state before steeping. All experiments have been performed using an ultrasonic horn operating at a fixed frequency of 20 KHz in 3 different ultrasonic power (20, 60 and 100% setting ...

  18. Plant-availability to barley of phosphorus in ash from thermally treated animal manure in comparison to other manure based materials and commercial fertilizer

    DEFF Research Database (Denmark)

    Kuligowski, Ksawery; Poulsen, Tjalfe Gorm; Rubæk, Gitte Holton

    2010-01-01

    ) were tested after application to two agricultural soil types (Jyndevad soil: clay 5.1%, silt 4.1%, sand 88.9%, organic matter 2.1%, total C 1.2% soil dry matter (DM), total P 266 mg kg-1 soil DM, pH 6.3; Rønhave soil: clay 15.4%, silt 32.6%, sand 49.6%, organic matter 2.3%, Total C 1.3% soil DM, total...... (GA) and a corresponding neutralized acid extract of the ash (ExL) in liquid form were the products in focus. Other products in use were: pelletized pig manure biogas residue (PEL), incinerated PEL (IA), anaerobically digested pig slurry (DS), dried ExL, dried fraction of separated pig slurry (SS......, 79% and 123% for IA, 95% and 155% for PEL, 94% and 73% for ExL, 55% and 15% for ExD, 64% and 82% for SS, 104% and 109% for DS, 60% and 95% for GAp, 73% and 111% for GAs, where the first value is based on barley DM yield and the second on barley total P uptake. Tripling the GA application rate to 60...

  19. WHIPPED FLOUR CONFECTIONERY BASED UPON WHOLE GRAIN GROUND FLOUR

    Directory of Open Access Journals (Sweden)

    G. O. Magomedov

    2014-01-01

    Full Text Available Summary. Flour confectionery products for the Russian market are the traditional products and their sales occupy the 1st place among all types of confectionery. Therefore, it is especially important to conduct research aimed at developing biscuits with increased food and biological value, meeting the existing in the human body requirements in nutrients. The use of flour from whole grain rye, wheat and amaranth allows to receive a quality product with a fine pore structure, pleasant taste and aroma and of high nutritional value. Using a mechanical method for dough loosening reduces operating costs, significantly intensifies the whole technological process, greatly reduces production area of enterprise, the duration of the entire technological process of biscuit production is reduced by 40%. In the developed biscuits protein content increases in 1,5 times; fiber in 6 times, potassium in 10.8 times, calcium in 11 times, phosphorus in 3 times, iron in 3.3 times, vitamin the B6 in4.1 times; B12 in 2.4 times, B9 in 12.4 times.

  20. Multiscale deep drawing analysis of dual-phase steels using grain cluster-based RGC scheme

    International Nuclear Information System (INIS)

    Tjahjanto, D D; Eisenlohr, P; Roters, F

    2015-01-01

    Multiscale modelling and simulation play an important role in sheet metal forming analysis, since the overall material responses at macroscopic engineering scales, e.g. formability and anisotropy, are strongly influenced by microstructural properties, such as grain size and crystal orientations (texture). In the present report, multiscale analysis on deep drawing of dual-phase steels is performed using an efficient grain cluster-based homogenization scheme.The homogenization scheme, called relaxed grain cluster (RGC), is based on a generalization of the grain cluster concept, where a (representative) volume element consists of p  ×  q  ×  r (hexahedral) grains. In this scheme, variation of the strain or deformation of individual grains is taken into account through the, so-called, interface relaxation, which is formulated within an energy minimization framework. An interfacial penalty term is introduced into the energy minimization framework in order to account for the effects of grain boundaries.The grain cluster-based homogenization scheme has been implemented and incorporated into the advanced material simulation platform DAMASK, which purposes to bridge the macroscale boundary value problems associated with deep drawing analysis to the micromechanical constitutive law, e.g. crystal plasticity model. Standard Lankford anisotropy tests are performed to validate the model parameters prior to the deep drawing analysis. Model predictions for the deep drawing simulations are analyzed and compared to the corresponding experimental data. The result shows that the predictions of the model are in a very good agreement with the experimental measurement. (paper)

  1. Improvement of creep-rupture properties by serrated grain boundaries in high-tungsten cobalt-base superalloys

    International Nuclear Information System (INIS)

    Tanaka, Manabu

    1993-01-01

    The improvement of creep-rupture properties by serrated grain boundaries was investigated using cobalt-base superalloys containing about 14 to 20 wt.% tungsten at 1089 and 1311 K. Serrated grain boundaries improved both the rupture life and the ductility, especially under lower stresses at 1089 K. The increase in rupture life was larger in the alloys containing a larger amount of W. Ductile grain boundary fracture surfaces, which involved dimple patterns and grain boundary ledges, were observed in the specimens with serrated grain boundaries whereas brittle grain boundary facets were observed in the specimens with normal straight grain boundaries ruptured at 1089 K. The strengthening by serrated grain boundaries was also effective at 1311 K, but there was little difference in rupture life between the specimens with serrated grain boundaries and those with straight grain boundaries under lower stresses, since serrated grain boundaries developed also in the specimens with straight grain boundaries according to grain boundary precipitates forming during creep at 1311 K. The increase in W content of the alloys led to the increase in rupture life of the specimens with serrated grain boundaries at 1089 and 1311 K. (orig.) [de

  2. Variation in the agronomic and morphological traits in spring barley

    Directory of Open Access Journals (Sweden)

    N. Dyulgerov

    2017-12-01

    Full Text Available Abstract. The study was conducted to examine the variation in the agronomic and morphological traits in spring barley. For this purpose, 22 lines from the ICARDA High Input Barley Program for favorable environment and 3 check varieties (Rihane-03, VMorales and Veslets were tested in an alpha-lattice design with two replications at the Institute of Agriculture – Karnobat, Bulgaria in 2014 and 2015 growing season. The traits days to heading, plant height, number of tillers per plant, flag leaf length, flag leaf width, spike length, awn length, peduncle length, spikelet number per spike, grain number per spike, grain weight per spike, 1000 grains weight, grain yield, powdery mildew (Erysiphe graminis f. sp. hordei, net blotch (Pyrenophora teres f. teres and stripe rust (Puccinia striiformis f. sp. hordei infection were studied. Significant differences between lines for all studied traits were found. The number of fertile tillers per plant was significantly positively correlated with grain yield. Lines expressed higher grain yields, shorter stem, better tolerance to net blotch and stripe rust than Bulgarian check variety Veslets were identified. These genotypes can, therefore, be used as parents for the improvement of spring barley.

  3. Proteomics analysis of maize (Zea mays L.) grain based on iTRAQ reveals molecular mechanisms of poor grain filling in inferior grains.

    Science.gov (United States)

    Yu, Tao; Li, Geng; Liu, Peng; Dong, Shuting; Zhang, Jiwang; Zhao, Bin

    2017-06-01

    In maize, inferior grains (IG) located on the upper part of the ear have poor grain filling process compared to superior grains (SG) located on the middle and lower parts of the ear. This difference limits satisfactory yield and quality; however, the underlying molecular mechanisms remain unknown. Here, using the isobaric tag for relative and absolute quantification (iTRAQ) technology, the proteomes of IG and SG during early and middle grain filling stages were investigated. In total, 4720 proteins were identified in maize grain and 305 differentially accumulated proteins (DiAPs) were detected between IG and SG. These DiAPs were involved in diverse cellular and metabolic processes with preferred distribution in protein synthesis/destination and metabolism. Compared to SG, DiAPs related to cell growth/division and starch synthesis were lag-accumulated and down-regulated in IG, respectively, resulting in smaller sink sizes and lower sink activities in IG. Meanwhile, impediment of the glycolysis pathway in IG may lead to reduce energy supply and building materials for substance synthesis. Additionally, reactive oxygen species (ROS) homeostasis and the defense system were disturbed in IG, which might lead to reduce protection against various environmental stresses. The present study provides new information on the proteomic differences between IG and SG, and explains possible molecular mechanisms for poor grain filling in IG. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  4. Effects of Added Enzymes on Sorted, Unsorted and Sorted-Out Barley: A Model Study on Realtime Viscosity and Process Potentials Using Rapid Visco Analyser

    DEFF Research Database (Denmark)

    Shetty, Radhakrishna; Zhuang, Shiwen; Olsen, Rasmus Lyngsø

    2017-01-01

    Barley sorting is an important step for selecting grain of required quality for malting prior to brewing. However, brewing with unmalted barley with added enzymes has been thoroughly proven, raising the question of whether traditional sorting for high quality malting-barley is still necessary....... To gain more insight on this, we examine realtime viscosity of sorted-out and unsorted barley during downscaled mashing with added enzymes in comparison with malting quality sorted barley. A rapid visco analyser was used to simulate brewery mashing process at lab scale together with two commercial enzymes...... (Ondea®-Pro and Cellic®-CTec2). During downscaled mashing, viscosity profile of sorted-out barley was markedly different from others, irrespective of enzyme type, whereas a small difference was observed between the sorted and un-sorted barley. Furthermore, whilst sorted-out barley generated lowest sugar...

  5. Single-grain results from an EMCCD-based imaging system

    International Nuclear Information System (INIS)

    Thomsen, K.J.; Kook, M.; Murray, A.S.; Jain, M.; Lapp, T.

    2015-01-01

    Here we compare the performance of an EMCCD-based imaging system with the standard laser-based single-grain Risø attachment. We first compare gamma dose distributions and the relative sensitivity of the two instruments is investigated using a single sample, by comparing the number of grains accepted into a dose distribution. EMCCD cross-talk is shown to be of concern at low light levels. We also make use of the fact that the EMCCD can observe TL signals from individual grains to examine the use of the correlation between the quartz 110 °C TL peak and the fast component OSL signal to correct for sensitivity change. Finally, we present the OSL dose distributions from a set of both well-bleached and poorly-bleached sedimentary samples. From a comparison of the measured doses, we conclude that the two instruments give indistinguishable dose estimates and dispersions, despite the fact that the laser-based system is effectively about four times as sensitive as the EMCCD. - Highlights: • Using an EMCCD-based imaging system to measure quartz single-grain OSL and TL. • PMT based system more sensitive. • Quartz OSL decay rate variability caused by varying effective stimulation power. • EMCCD imaging can provide useful measurements of single-grain quartz doses.

  6. The untranslated leader sequence of the barley lipoxygenase 1 (Lox1) gene confers embryo-specific expression

    NARCIS (Netherlands)

    Rouster, J.; Mechelen J. van; Cameron-Mills, V.

    1998-01-01

    The barley lipoxygenase 1 (Lox1) gene encodes a protein expressed in embryos during grain development and germination and in leaves after methyl-jasmonate (MeJA) treatment. Transient gene expression assays in germinating barley embryos were used to identify cis-regulatory elements involved in the

  7. THE EFFECT OF NON-STARCH POLYSACCHARIDES DERIVED FROM DIFFERENT GRAINS ON PERFORMANCE AND DIGESTIVE ACTIVITY IN LAYING HENS

    Directory of Open Access Journals (Sweden)

    S. Hartini

    2014-10-01

    Full Text Available An experiment was conducted to observe the effect of non-starch polysaccharides (NSP onperformance and digestive activity of laying hens. Thirty-two ISA Brown hens were individually cagedand offered four diets (wheat-based, millrun-based, barley-based, and barley-enzymes diets for 10weeks. The present experiment was assigned in a completely randomized design with 8 replicates perdietary treatment. Wheat- and barley diets caused significantly higher (P<0.05 viscosity than otherdiets. Increased viscosity caused lower digesta dry matter (DM (P<0.01 and higher excreta moisture(P<0.05. The wheat diet did not cause a negative effect on intestinal starch digestibility, feed intake, andbird performance (P>0.05. Birds fed the barley-based diet had lower weight gain (P<0.05 and highercaecal weight (P<0.05 than those given other diets. Enzyme supplementation on barley dietssignificantly (P<0.05 reduced jejunal digesta viscosity and caecal weight, increased weight gain(P<0.05 and ileal digesta DM (P<0.01, and numerically reduced excreta moisture. The current studydemonstrated that NSP have a profound effect on digesta viscosity, performance, and digestive organs ofbirds; however, the NSP action may be modified by an interaction with each other and with other cellwallcomponents of grains in the gut. Enzyme supplementation reduced the negative effect of digestaviscosity.

  8. Barley Transformation Using Agrobacterium-Mediated Techniques

    Science.gov (United States)

    Harwood, Wendy A.; Bartlett, Joanne G.; Alves, Silvia C.; Perry, Matthew; Smedley, Mark A.; Leyland, Nicola; Snape, John W.

    Methods for the transformation of barley using Agrobacterium-mediated techniques have been available for the past 10 years. Agrobacterium offers a number of advantages over biolistic-mediated techniques in terms of efficiency and the quality of the transformed plants produced. This chapter describes a simple system for the transformation of barley based on the infection of immature embryos with Agrobacterium tumefaciens followed by the selection of transgenic tissue on media containing the antibiotic hygromycin. The method can lead to the production of large numbers of fertile, independent transgenic lines. It is therefore ideal for studies of gene function in a cereal crop system.

  9. Grain refinement of permanent mold cast copper base alloys. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Sadayappan, M.; Thomson, J. P.; Elboujdaini, M.; Gu, G. Ping; Sahoo, M.

    2004-04-29

    control tool was proved in two foundries. The method can also correctly predict the onset of fading. The corrosion resistance of the grain refined alloys was measured in two solutions having different hydrogen activities, pH 6 and pH8, and compared with the base alloys. Potentiodynamic polarization and long term weight loss experiments were conducted to evaluate the corrosion resistance. Cu-Zn alloys were evaluated for dezincification. In general, the grain refined alloys performed marginally better than the base alloys.

  10. BARLEY BALANCE SHEET IN ROMANIA

    Directory of Open Access Journals (Sweden)

    Dragoş Mihai MEDELETE

    2013-01-01

    Full Text Available Barley is one of the most important cereal grown in Romania, after corn and wheat. This is based, at least on considerations of cultivated area (413.4 thousand ha - average 2007-2009, but also because of the multiple uses it may have (Food, feed, industrial raw materials, etc.. Presentation of food balance we consider interesting in terms of supply and demand components: production, imports, stocks, exports, seeds, feed consumption, industrial raw materials, food and other useslosses. On the basis of total volume of supply and demand we could determine the balance sheet at nationa level for the product.

  11. Nitrogen metabolism and route of excretion in beef feedlot cattle fed barley-based finishing diets varying in protein concentration and rumen degradability.

    Science.gov (United States)

    Koenig, K M; Beauchemin, K A

    2013-05-01

    The objectives were to characterize the effects of supplemental CP concentration and ruminal degradability in barley-based finishing diets on microbial protein synthesis, ruminal fermentation and nutrient digestion, and route and chemical form of N excretion in beef cattle. Four Angus heifers (564 ± 18 kg BW) with ruminal and duodenal cannulas were used in an experiment designed as a 4 × 4 Latin square with four 28-d periods (9 d for diet adaptation and 19 d for measurements). The basal diet consisted of 9% barley silage and 91% barley-based concentrate (DM basis). Dietary treatments included the basal diet with no added protein (13% CP) or diets containing 14.5% CP by supplementation with urea (UREA), urea and canola meal (UREA+CM), or urea, corn gluten meal, and xylose-treated soybean meal (UREA+CGM+xSBM). Nutrient digestion was determined using Yb as a digesta flow marker and purine N as a microbial marker with the collection of ruminal, duodenal, and fecal samples over 5 d. The next week, total collections of feces and urine were performed for 5 d to quantify route and chemical form of N excretion. Feed offered was restricted (95% of ad libitum) and there was no effect of the dietary treatments on DMI (P = 0.55); therefore, N intake was less (P ruminal NH3-N (P = 0.17), peptide N (P = 0.46), and VFA (P = 0.62) concentrations, flow of microbial (P = 0.69) and feed (P = 0.22) N, and ruminal and total tract nutrient digestibility (P ≥ 0.18). Nutrient digestion in the rumen and total tract averaged 75.4 ± 3.8% and 84.6 ± 0.9% for OM, 80.8 ± 3.6% and 95.8 ± 0.8% for starch, and 41.2 ± 7.9% and 60.4 ± 3.3% of intake for NDF, respectively. Daily output of N in feces (P = 0.91) and urine (P = 0.14) were not affected by the dietary treatments. Fecal N output averaged 19.9 ± 1.9% (P = 0.30) and urine N output averaged 44.1 ± 2.8% (P = 0.63) of N intake. Urea N output, however, was greater (P excretion and the potential loss of N from the system.

  12. Evaluation of drought tolerance and yield capacity of barley (hordeum vulgare) genotypes under irrigated and water-stressed conditions

    International Nuclear Information System (INIS)

    Khokhar, M.I.; Silva, J.A.T.D

    2012-01-01

    Twelve barley genotypes developed through different selection methods were evaluated under drought and irrigated conditions. The results of a correlation matrix revealed highly significant associations between Grain Yield (Yp) and Mean Productivity (MP), Stress Tolerance Index (STI), Geometric Mean Productivity (GMP) and Yield Index (Yi) under irrigated conditions while the Mean Productivity (MP), Yield Stability Index (Yi), Stress Tolerance Index (STI), Geometric Mean Productivity (GMP) and Yield Index (Yi) had a high response under stressed condition. Based on a principal component analysis, Geometric Mean Productivity (GMP), Mean Productivity (MP) and Stress Tolerance Index (STI) were considered to be the best parameters for selection of drought-tolerant genotypes. The 2-row barley genotypes B-07023 and B-07021 performed better in yield response under drought conditions and were more stable under stress conditions. Furthermore, drought stress reduced the yield of some genotypes while others were tolerant to drought, suggesting genetic variability in this material for drought tolerance. (author)

  13. Barley starch bioengineering for high phosphate and amylose

    DEFF Research Database (Denmark)

    Blennow, Per Gunnar Andreas; Carciofi, Massimiliano; Shaik, Shahnoor Sultana

    2011-01-01

    Starch is a biological polymer that can be industrially produced in massive amounts in a very pure form. Cereals is the main source for starch production and any improvement of the starch fraction can have a tremendous impact in food and feed applications. Barley ranks number four among cereal...... of the three genes encoding the starch-branching enzymes SBEI, SBEIIa, and SBEIIb using a triple RNAi chimeric hairpin construct we generated a virtually amylopectin-free barley. The grains of the transgenic lines were shrunken and had a yield of around 80% of the control line. The starch granules were...

  14. Construction of barley consensus map showing chromosomal ...

    African Journals Online (AJOL)

    In the past, it has been difficult to accurately determine the location of many types of barley molecular markers due to the lack of commonality between international barley linkage maps. In this study, a consensus map of barley was constructed from five different maps (OWB, VxHs, KxM, barley consensus 2 and barley ...

  15. Effect of feeding corn, hull-less or hulled barley on fermentation by mixed cultures of ruminal microorganisms.

    Science.gov (United States)

    Fellner, V; Burns, J C; Marshall, D S

    2008-05-01

    Increased demands for corn grain warrant the evaluation of alternative grain types for ruminant production systems. This study was conducted to determine the effects of hulled and hull-less barley (Hordeum vulgare L.) cultivars compared with corn (Zea mays L.) as an alternative grain type on fermentation in cultures of mixed ruminal microorganisms. Three continuous fermentors were fed 14 g of dry feed per day (divided equally between 2 feedings) consisting of alfalfa (Medicago sativa L.) hay pellets (40% of dry matter) and 1) ground corn, 2) hulled barley, or 3) hull-less barley concentrate (60% of dry matter) in each fermentor. Following an adaptation period of 5 d, culture samples were taken at 2 h after the morning feeding on d 6, 7, and 8 of each period for analysis. A second run of the fermentors followed the same treatment sequence to provide replication. Culture pH was reduced with corn (5.55) and did not differ between barley cultivars (average pH 5.89). Total volatile fatty acid concentration and acetate to propionate ratio were not different across grain type or barley cultivar with the exception of greater total volatile fatty acid concentrations with hull-less barley. Corn produced less methane (14.6 mmol/d) and ammonia-N (7.3 mg/100 mL) compared with barley (33.1 mmol/d and 22 mg/100 mL, respectively); methane was greater with hull-less barley but ammonia-N concentration was similar between the 2 barley cultivars. Hull-less barley had greater digestibility compared with hulled barley, and corn had reduced digestibility compared with barley. Concentrations of C18:0 were greater and those of C18:1 and C18:2 lesser in cultures fed hulled and hull-less barley compared with corn. Our data indicate that grain type and barley cultivar have an impact on ruminal fermentation. The lesser starch concentration of barley minimized the drop in culture pH and improved digestibility.

  16. Mitogen-Activated Protein Kinase Kinase 3 Regulates Seed Dormancy in Barley.

    Science.gov (United States)

    Nakamura, Shingo; Pourkheirandish, Mohammad; Morishige, Hiromi; Kubo, Yuta; Nakamura, Masako; Ichimura, Kazuya; Seo, Shigemi; Kanamori, Hiroyuki; Wu, Jianzhong; Ando, Tsuyu; Hensel, Goetz; Sameri, Mohammad; Stein, Nils; Sato, Kazuhiro; Matsumoto, Takashi; Yano, Masahiro; Komatsuda, Takao

    2016-03-21

    Seed dormancy has fundamental importance in plant survival and crop production; however, the mechanisms regulating dormancy remain unclear [1-3]. Seed dormancy levels generally decrease during domestication to ensure that crops successfully germinate in the field. However, reduction of seed dormancy can cause devastating losses in cereals like wheat (Triticum aestivum L.) and barley (Hordeum vulgare L.) due to pre-harvest sprouting, the germination of mature seed (grain) on the mother plant when rain occurs before harvest. Understanding the mechanisms of dormancy can facilitate breeding of crop varieties with the appropriate levels of seed dormancy [4-8]. Barley is a model crop [9, 10] and has two major seed dormancy quantitative trait loci (QTLs), SD1 and SD2, on chromosome 5H [11-19]. We detected a QTL designated Qsd2-AK at SD2 as the single major determinant explaining the difference in seed dormancy between the dormant cultivar "Azumamugi" (Az) and the non-dormant cultivar "Kanto Nakate Gold" (KNG). Using map-based cloning, we identified the causal gene for Qsd2-AK as Mitogen-activated Protein Kinase Kinase 3 (MKK3). The dormant Az allele of MKK3 is recessive; the N260T substitution in this allele decreases MKK3 kinase activity and appears to be causal for Qsd2-AK. The N260T substitution occurred in the immediate ancestor allele of the dormant allele, and the established dormant allele became prevalent in barley cultivars grown in East Asia, where the rainy season and harvest season often overlap. Our findings show fine-tuning of seed dormancy during domestication and provide key information for improving pre-harvest sprouting tolerance in barley and wheat. Copyright © 2016 Elsevier Ltd. All rights reserved.

  17. Modeling Micro-cracking Behavior of Bukit Timah Granite Using Grain-Based Model

    Science.gov (United States)

    Peng, Jun; Wong, Louis Ngai Yuen; Teh, Cee Ing; Li, Zhihuan

    2018-01-01

    Rock strength and deformation behavior has long been recognized to be closely related to the microstructure and the associated micro-cracking process. A good understanding of crack initiation and coalescence mechanisms will thus allow us to account for the variation of rock strength and deformation properties from a microscopic view. This paper numerically investigates the micro-cracking behavior of Bukit Timah granite by using a grain-based modeling approach. First, the principles of grain-based model adopted in the two-dimensional Particle Flow Code and the numerical model generation procedure are reviewed. The micro-parameters of the numerical model are then calibrated to match the macro-properties of the rock obtained from tension and compression tests in the laboratory. The simulated rock properties are in good agreement with the laboratory test results with the errors less than ±6%. Finally, the calibrated model is used to study the micro-cracking behavior and the failure modes of the rock under direct tension and under compression with different confining pressures. The results reveal that when the numerical model is loaded in direct tension, only grain boundary tensile cracks are generated, and the simulated macroscopic fracture agrees well with the results obtained in laboratory tests. When the model is loaded in compression, the ratio of grain boundary tensile cracks to grain boundary shear cracks decreases with the increase in confining pressure. In other words, the results show that as the confining pressure increases, the failure mechanism changes from tension to shear. The simulated failure mode of the model changes from splitting to shear as the applied confining pressure gradually increases, which is comparable with that observed in laboratory tests. The grain-based model used in this study thus appears promising for further investigation of microscopic and macroscopic behavior of crystalline rocks under different loading conditions.

  18. Determination of 137Cs, 90Sr, 40K radionuclides in food grain and commercial food grain products

    International Nuclear Information System (INIS)

    Solecki, J.; Kruk, M.

    2011-01-01

    Following up transfer of strontium from soil to plants requires determination of isotope in the surface layer of soil and a chosen plant. The most endangered food products are plants including commonly grown grain, which constitutes a basic feeding component for both people and animals. Indeed large amounts of 137 Cs, 90 Sr get into organisms of people and animals with the food, therefore determination of radioactivity of elements in food products and animal fodder is very essential. Choice of proper diet allows to limit the level of human organism denaturation. The aim of this paper was to study relocation of 90 Sr, 137 Cs, 40 K isotopes from soil to grain and then from grain to food products. There were investigated soil, wheat, barley, groats, flour, macaroni and breakfast flakes. Based on the obtained results there were calculated effective weighted doses [nSv] from consumption of 1 kg of a product for different age groups. (author)

  19. Methods for the genetic improvement of quality and quantity in barley

    International Nuclear Information System (INIS)

    Persson, G.

    1984-01-01

    Improvements of endosperm protein in barley are apparently difficult to combine with high grain yield. The reasons are discussed and the breeding approaches are suggested by which satisfactory yields and good grain quality may be achieved. Considerations are also given to input requirements and stress tolerance. (author)

  20. Front tracking based modeling of the solid grain growth on the adaptive control volume grid

    Science.gov (United States)

    Seredyński, Mirosław; Łapka, Piotr

    2017-07-01

    The paper presents the micro-scale model of unconstrained solidification of the grain immersed in under-cooled liquid, based on the front tracking approach. For this length scale, the interface tracked through the domain is meant as the solid-liquid boundary. To prevent generation of huge meshes the energy transport equation is discretized on the adaptive control volume (c.v.) mesh. The coupling of dynamically changing mesh and moving front position is addressed. Preliminary results of simulation of a test case, the growth of single grain, are presented and discussed.

  1. Maize/Sorghum - Based Dried Brewers' Grains In Broiler Finisher Diets

    African Journals Online (AJOL)

    A 40 - day feeding trial was conducted to determine the optimal substitution level of maize/sorghum-based dried brewers' grains (MSDBG) for maize in broiler ... At replacement levels or 50% and 75% with or without palm oil, the birds consumed significantly (P< 0.05) more feed than the group on the control diet (140.0, ...

  2. Coarse-grained variables for particle-based models: diffusion maps and animal swarming simulations

    Science.gov (United States)

    Liu, Ping; Safford, Hannah R.; Couzin, Iain D.; Kevrekidis, Ioannis G.

    2014-12-01

    As microscopic (e.g. atomistic, stochastic, agent-based, particle-based) simulations become increasingly prevalent in the modeling of complex systems, so does the need to systematically coarse-grain the information they provide. Before even starting to formulate relevant coarse-grained equations, we need to determine the right macroscopic observables—the right variables in terms of which emergent behavior will be described. This paper illustrates the use of data mining (and, in particular, diffusion maps, a nonlinear manifold learning technique) in coarse-graining the dynamics of a particle-based model of animal swarming. Our computational data-driven coarse-graining approach extracts two coarse (collective) variables from the detailed particle-based simulations, and helps formulate a low-dimensional stochastic differential equation in terms of these two collective variables; this allows the efficient quantification of the interplay of "informed" and "naive" individuals in the collective swarm dynamics. We also present a brief exploration of swarm breakup and use data-mining in an attempt to identify useful predictors for it. In our discussion of the scope and limitations of the approach we focus on the key step of selecting an informative metric, allowing us to usefully compare different particle swarm configurations.

  3. Observation of Pseudopartial Grain Boundary Wetting in the NdFeB-Based Alloy

    Science.gov (United States)

    Straumal, B. B.; Mazilkin, A. A.; Protasova, S. G.; Schütz, G.; Straumal, A. B.; Baretzky, B.

    2016-08-01

    The NdFeB-based alloys were invented in 1980s and remain the best-known hard magnetic alloys. In order to reach the optimum magnetic properties, the grains of hard magnetic Nd2Fe14B phase have to be isolated from one another by the (possibly thin) layers of a non-ferromagnetic Nd-rich phase. In this work, we observe that the few-nanometer-thin layers of the Nd-rich phase appear between Nd2Fe14B grains due to the pseudopartial grain boundary (GB) wetting. Namely, some Nd2Fe14B/Nd2Fe14B GBs are not completely wetted by the Nd-rich melt and have the high contact angle with the liquid phase and, nevertheless, contain the 2-4-nm-thin uniform Nd-rich layer.

  4. Systematic and simulation-free coarse graining of homopolymer melts: A structure-based study

    International Nuclear Information System (INIS)

    Yang, Delian; Wang, Qiang

    2015-01-01

    We propose a systematic and simulation-free strategy for coarse graining of homopolymer melts, where each chain of N m monomers is uniformly divided into N segments, with the spatial position of each segment corresponding to the center-of-mass of its monomers. We use integral-equation theories suitable for the study of equilibrium properties of polymers, instead of many-chain molecular simulations, to obtain the structural and thermodynamic properties of both original and coarse-grained (CG) systems, and quantitatively examine how the effective pair potentials between CG segments and the thermodynamic properties of CG systems vary with N. Our systematic and simulation-free strategy is much faster than those using many-chain simulations, thus effectively solving the transferability problem in coarse graining, and provides the quantitative basis for choosing the appropriate N-values. It also avoids the problems caused by finite-size effects and statistical uncertainties in many-chain simulations. Taking the simple hard-core Gaussian thread model [K. S. Schweizer and J. G. Curro, Chem. Phys. 149, 105 (1990)] as the original system, we demonstrate our strategy applied to structure-based coarse graining, which is quite general and versatile, and compare in detail the various integral-equation theories and closures for coarse graining. Our numerical results show that the effective CG potentials for various N and closures can be collapsed approximately onto the same curve, and that structure-based coarse graining cannot give thermodynamic consistency between original and CG systems at any N < N m

  5. Grain growth and static recrystallization kinetics in Co-20Cr-15W-10Ni (L-605) cobalt-base superalloy

    Science.gov (United States)

    Favre, Julien; Fabrègue, Damien; Maire, Eric; Chiba, Akihiko

    2014-06-01

    The grain size evolution of cold-rolled L-605 cobalt-base superalloy during ultra-rapid annealing is investigated in this paper. Cold-worked specimens undergo static recrystallization, leading to grain refinement or grain coarsening depending on the annealing time and temperature. The kinetics of grain growth is found to be independent of the initial deformation. The evolution of grain size can be simply described by a grain growth model for high temperatures and long annealing times, and the mobility of interfaces is estimated by modelling. Fast annealing treatment process is a very promising technique to customize grain size and enhance mechanical strength. In particular, the reduction of annealing time is an efficient method to produce a refined microstructure through static recrystallization.

  6. Use of Selection Indices Based on Multivariate Analysis for Improving Grain Yield in Rice

    Directory of Open Access Journals (Sweden)

    Hossein SABOURI

    2008-12-01

    Full Text Available In order to study selection indices for improving rice grain yield, a cross was made between an Iranian traditional rice (Oryza sativa L. variety, Tarommahalli and an improved indica rice variety, Khazar in 2006. The traits of the parents (30 plants, F1 (30 plants and F2 generations (492 individuals were evaluated at the Rice Research Institute of Iran (RRII during 2007. Heritabilities of the number of panicles per plant, plant height, days to heading and panicle exsertion were greater than that of grain yield. The selection indices were developed using the results of multivariate analysis. To evaluate selection strategies to maximize grain yield, 14 selection indices were calculated based on two methods (optimum and base and combinations of 12 traits with various economic weights. Results of selection indices showed that selection for grain weight, number of panicles per plant and panicle length by using their phenotypic and/or genotypic direct effects (path coefficient as economic weights should serve as an effective selection criterion for using either the optimum or base index.

  7. Effectiveness of an improved form of insecticide-based diatomaceous earth against four stored grain pests on different grain commodities.

    Science.gov (United States)

    Saeed, Nadia; Farooq, Muhammad; Shakeel, Muhammad; Ashraf, Misbah

    2018-04-07

    The effectiveness of Grain-Guard, an improved form of diatomaceous earth (DE), with low risk to the environment, was evaluated against the storage pests Liposcelis paeta, Cryptolestes ferrugineus, Rhyzopertha dominica, and Tribolium castaneum on four grain commodities, wheat, rice, maize and sorghum. The overall mortality of stored grain pests increased with the rise of application rate and exposure intervals of diatomaceous earth and decreased over 120 days of post-treatment period. Our results revealed that mortality of adults 14 days post-disclosure was > 80% on wheat at the start of post-treatment than rice, maize, and sorghum, respectively. During the first 60 days of post-treatment, adult mortality increased, whereas later on, a steady decrease in adult mortality was observed. Considerable differences in dose rates were observed on mortality levels along with grain commodities. Following 14 days of exposure, all adults of four species were dead on wheat at 100 ppm and on rice at 150 ppm except maize and sorghum. The suppression of progeny was noticeably higher at the beginning of post-treatment duration while after 60-days of post-treatment, progeny numbers started to increase with the rise in post-treatment durations. This new improved DE formulation was found to be effective at dose rates that are extensively lower than required with previous DE formulations and will contribute to lower the risk of health and environment.

  8. Strain Amount Dependent Grain Size and Orientation Developments during Hot Compression of a Polycrystalline Nickel Based Superalloy

    Directory of Open Access Journals (Sweden)

    Guoai He

    2017-02-01

    Full Text Available Controlling grain size in polycrystalline nickel base superalloy is vital for obtaining required mechanical properties. Typically, a uniform and fine grain size is required throughout forging process to realize the superplastic deformation. Strain amount occupied a dominant position in manipulating the dynamic recrystallization (DRX process and regulating the grain size of the alloy during hot forging. In this article, the high-throughput double cone specimen was introduced to yield wide-range strain in a single sample. Continuous variations of effective strain ranging from 0.23 to 1.65 across the whole sample were achieved after reaching a height reduction of 70%. Grain size is measured to be decreased from the edge to the center of specimen with increase of effective strain. Small misorientation tended to generate near the grain boundaries, which was manifested as piled-up dislocation in micromechanics. After the dislocation density reached a critical value, DRX progress would be initiated at higher deformation region, leading to the refinement of grain size. During this process, the transformations from low angle grain boundaries (LAGBs to high angle grain boundaries (HAGBs and from subgrains to DRX grains are found to occur. After the accomplishment of DRX progress, the neonatal grains are presented as having similar orientation inside the grain boundary.

  9. Combined moist airtight storage and feed fermentation of barley by the yeast Wickerhamomyces anomalus and a lactic acid bacteria consortium

    Directory of Open Access Journals (Sweden)

    Jenny eBorling Welin

    2015-04-01

    Full Text Available This study combined moist airtight storage of moist grain with pig feed fermentation. Starter cultures with the potential to facilitate both technologies were added to airtight stored moist crimped cereal grain, and the impact on storage microflora and the quality of feed fermentations generated from the grain was investigated. Four treatments were compared: three based on moist barley, either un inoculated (M, inoculated with Wickerhamomyces anomalus (W, or inoculated with W. anomalus and LAB starter culture, containing Pediococcus acidilactici DSM 16243, Pediococcus pentosaceus DSM 12834 and Lactobacillus plantarum DSM 12837 (WLAB; and one treatment based on dried barley (D. After 6 weeks of storage, four feed fermentations FM, FW, FWLAB, and FD, were initiated from M, W, WLAB and D, respectively, by mixing the grain with water to a dry matter content of 30%. Each treatment was fermented in batch initially for 7 days and then kept in a continuous mode by adding new feed daily with 50% back-slop. During the 6 week storage period, the average water activity decreased in M, W and WLAB from 0.96 to 0.85, and cereal pH decreased from approximately 6.0 at harvest to 4.5. Feed fermentation conferred a further pH decrease to 3.8 – 4.1. In M, W and WLAB, moulds and Enterobacteriaceae were mostly below detection limit, whereas both organism groups were detected in D. In fermented feed, Enterobacteriaceae were below detection limit in almost all conditions. Moulds were detected in FD, for most of the fermentation time in FM and at some sampling points in FW and FWLAB. Starter organisms, especially W. anomalus and L. plantarum comprised a considerable proportion of the yeast and LAB populations, respectively, in both stored grain and fermented feed. However, autochthonous Pichia kudriavzevii and Kazachstania exigua partially dominated the yeast populations in stored grain and fermented feed, respectively.

  10. Weed suppression ability of spring barley varieties

    DEFF Research Database (Denmark)

    Christensen, Svend

    1995-01-01

    Three years of experiments with spring barley showed significant differences in weed suppression ability among varieties. Weed dry matter in the most suppressive variety, Ida, was 48% lower than the mean weed dry matter of all varieties, whereas it was 31% higher in the least suppressive variety......, Grit. Ranking varietal responses to weed competition in terms of grain yield loss corresponded well to ranking weed dry matter produced in crop weed mixtures. There was no correspondence between the varietal grain yields in pure stands and their competitiveness, suggesting that breeding to optimize...... interception model was developed to describe the light interception profiles of the varieties. A study of the estimated parameters showed significant correlation between weed dry matter, rate of canopy height development and the light interception profile. However, when estimates were standardized to eliminate...

  11. Enzymatic hydrolysis of barley and malt hemicellulose during brewing and mashing

    Energy Technology Data Exchange (ETDEWEB)

    Ogurtsov, V.E.; Lifshits, D.B.; Kondratenko, N.V.; Babicheva, L.K.; Yarovenko, V.L.

    1978-01-01

    A study was made of the hydrolysis of hemicellulose as beer wort is produced during the mashing of malt and barley. The hydrolysis of hemicellulose was found to be insignificant (5 to 6%) as the barley is mashed (fine and course grain) under the influence of its enzymes. The hydrolysis is more intense (by 30%) when endosperm is mashed. The hydrolysis of hemicellulose does not occur during the mashing of malt. The mashing of barley endosperm with enzymatic preparations containing hemicellulose (cytorosemin P10kh, xylonigrin P10kh, amylorisin P10kh, and amylosubtilin G10kh), increases the hydrolysis of hemicellulose by 10 to 20% depending on the amount of hemicellulose. The utilization of the raw material extract is simultaneously increased significantly. The mashing of barley with the same enzyme preparations increases the degree of hemicellulose hydrolysis by 6 to 18% and the use of the raw extract by 14 to 27% by 3 to 10% for the fine grain, and by 9 to 25% for the course grain. The degree of hemicellulose hydrolysis during the production of barley wort is influenced not only by the composition of the mash (endosperm or whole grain), but also by the degree of grain pulverization. 7 references, 5 tables.

  12. CDNA cloning, characterization and expression of an endosperm-specific barley peroxidase

    DEFF Research Database (Denmark)

    Rasmussen, Søren Kjærsgård; Welinder, K.G.; Hejgaard, J.

    1991-01-01

    A barley peroxidase (BP 1) of pI ca. 8.5 and M(r) 37000 has been purified from mature barley grains. Using antibodies towards peroxidase BP 1, a cDNA clone (pcR7) was isolated from cDNA expression library. The nucleotide sequence of pcR7 gave a derived amino acid sequence identical to the 158 C...

  13. Distinct developmental defense activations in barley embryos identified by transcriptome profiling

    DEFF Research Database (Denmark)

    Nielsen, ME; Lok, F; Nielsen, Henrik Bjørn

    2006-01-01

    analyses of > 22,000 genes, which together with measurements of jasmonic acid and salicylic acid during embryo development provide new information on the initiation in the developing barley embryo of at least two distinct types of developmental defense activation (DDA). Early DDA is characterized by the up......-regulation of several PR genes is notable. Throughout barley embryo development, there are no indications of an increased biosynthesis of either jasmonic acid or salicylic acid. Collectively, the results help explain how the proposed DDA enables protection of the developing barley embryo and grain for purposes...

  14. Identification of a phytase gene in barley (Hordeum vulgare L..

    Directory of Open Access Journals (Sweden)

    Fei Dai

    Full Text Available BACKGROUND: Endogenous phytase plays a crucial role in phytate degradation and is thus closely related to nutrient efficiency in barley products. The understanding of genetic information of phytase in barley can provide a useful tool for breeding new barley varieties with high phytase activity. METHODOLOGY/PRINCIPAL FINDINGS: Quantitative trait loci (QTL analysis for phytase activity was conducted using a doubled haploid population. Phytase protein was purified and identified by the LC-ESI MS/MS Shotgun method. Purple acid phosphatase (PAP gene was sequenced and the position was compared with the QTL controlling phytase activity. A major QTL for phytase activity was mapped to chromosome 5 H in barley. The gene controlling phytase activity in the region was named as mqPhy. The gene HvPAP a was mapped to the same position as mqPhy, supporting the colinearity between HvPAP a and mqPhy. CONCLUSIONS/SIGNIFICANCE: It is the first report on QTLs for phytase activity and the results showed that HvPAP a, which shares a same position with the QTL, is a major phytase gene in barley grains.

  15. Mutations in Barley Row Type Genes Have Pleiotropic Effects on Shoot Branching.

    Directory of Open Access Journals (Sweden)

    Corinna Brit Liller

    Full Text Available Cereal crop yield is determined by different yield components such as seed weight, seed number per spike and the tiller number and spikes. Negative correlations between these traits are often attributed to resource limitation. However, recent evidence suggests that the same genes or regulatory modules can regulate both inflorescence branching and tillering. It is therefore important to explore the role of genetic correlations between different yield components in small grain cereals. In this work, we studied pleiotropic effects of row type genes on seed size, seed number per spike, thousand grain weight, and tillering in barley to better understand the genetic correlations between individual yield components. Allelic mutants of nine different row type loci (36 mutants, in the original spring barley varieties Barke, Bonus and Foma and introgressed in the spring barley cultivar Bowman, were phenotyped under greenhouse and outdoor conditions. We identified two main mutant groups characterized by their relationships between seed and tillering parameters. The first group comprises all mutants with an increased number of seeds and significant change in tiller number at early development (group 1a or reduced tillering only at full maturity (group 1b. Mutants in the second group are characterized by a reduction in seeds per spike and tiller number, thus exhibiting positive correlations between seed and tiller number. Reduced tillering at full maturity (group 1b is likely due to resource limitations. In contrast, altered tillering at early development (groups 1a and 2 suggests that the same genes or regulatory modules affect inflorescence and shoot branching. Understanding the genetic bases of the trade-offs between these traits is important for the genetic manipulation of individual yield components.

  16. The wheat Lr34 gene provides resistance against multiple fungal pathogens in barley.

    Science.gov (United States)

    Risk, Joanna M; Selter, Liselotte L; Chauhan, Harsh; Krattinger, Simon G; Kumlehn, Jochen; Hensel, Goetz; Viccars, Libby A; Richardson, Terese M; Buesing, Gabriele; Troller, Anna; Lagudah, Evans S; Keller, Beat

    2013-09-01

    The Lr34 gene encodes an ABC transporter and has provided wheat with durable, broad-spectrum resistance against multiple fungal pathogens for over 100 years. Because barley does not have an Lr34 ortholog, we expressed Lr34 in barley to investigate its potential as a broad-spectrum resistance resource in another grass species. We found that introduction of the genomic Lr34 sequence confers resistance against barley leaf rust and barley powdery mildew, two pathogens specific for barley but not virulent on wheat. In addition, the barley lines showed enhanced resistance against wheat stem rust. Transformation with the Lr34 cDNA or the genomic susceptible Lr34 allele did not result in increased resistance. Unlike wheat, where Lr34-conferred resistance is associated with adult plants, the genomic Lr34 transgenic barley lines exhibited multipathogen resistance in seedlings. These transgenic barley lines also developed leaf tip necrosis (LTN) in young seedlings, which correlated with an up-regulation of senescence marker genes and several pathogenesis-related (PR) genes. In wheat, transcriptional expression of Lr34 is highest in adult plants and correlates with increased resistance and LTN affecting the last emerging leaf. The severe phenotype of transgenic Lr34 barley resulted in reduced plant growth and total grain weight. These results demonstrate that Lr34 provides enhanced multipathogen resistance early in barley plant development and implies the conservation of the substrate and mechanism of the LR34 transporter and its molecular action between wheat and barley. With controlled gene expression, the use of Lr34 may be valuable for many cereal breeding programmes, particularly given its proven durability. © 2013 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  17. Comparison of beer quality attributes between beers brewed with 100% barley malt and 100% barley raw material.

    Science.gov (United States)

    Steiner, Elisabeth; Auer, Andrea; Becker, Thomas; Gastl, Martina

    2012-03-15

    Brewing with 100% barley using the Ondea® Pro exogenous brewing enzyme product was compared to brewing with 100% barley. The use of barley, rather than malt, in the brewing process and the consequences for selected beer quality attributes (foam formation, colloidal stability and filterability, sensory differences, protein content and composition) was considered. The quality attributes of barley, malt, kettle-full-wort, cold wort, unfiltered beer and filtered beer were assessed. A particular focus was given to monitoring changes in the barley protein composition during the brewing process and how the exogenous OndeaPro® enzymes influenced wort protein composition. All analyses were based on standard brewing methods described in ASBC, EBC or MEBAK. To monitor the protein changes two-dimensional polyacrylamide gel electrophoresis was used. It was shown that by brewing beer with 100% barley and an appropriate addition of exogenous Ondea® Pro enzymes it was possible to efficiently brew beer of a satisfactory quality. The production of beers brewed with 100% barley resulted in good process efficiency (lautering and filtration) and to a final product whose sensory quality was described as light, with little body and mouthfeel, very good foam stability and similar organoleptic qualities compared to conventional malt beer. In spite of the sensory evaluation differences could still be seen in protein content and composition. Copyright © 2011 Society of Chemical Industry.

  18. GRAIN-SIZE MEASUREMENTS OF FLUVIAL GRAVEL BARS USING OBJECT-BASED IMAGE ANALYSIS

    Directory of Open Access Journals (Sweden)

    Pedro Castro

    2018-01-01

    Full Text Available Traditional techniques for classifying the average grain size in gravel bars require manual measurements of each grain diameter. Aiming productivity, more efficient methods have been developed by applying remote sensing techniques and digital image processing. This research proposes an Object-Based Image Analysis methodology to classify gravel bars in fluvial channels. First, the study evaluates the performance of multiresolution segmentation algorithm (available at the software eCognition Developer in performing shape recognition. The linear regression model was applied to assess the correlation between the gravels’ reference delineation and the gravels recognized by the segmentation algorithm. Furthermore, the supervised classification was validated by comparing the results with field data using the t-statistic test and the kappa index. Afterwards, the grain size distribution in gravel bars along the upper Bananeiras River, Brazil was mapped. The multiresolution segmentation results did not prove to be consistent with all the samples. Nonetheless, the P01 sample showed an R2 =0.82 for the diameter estimation and R2=0.45 the recognition of the eliptical ft. The t-statistic showed no significant difference in the efficiencies of the grain size classifications by the field survey data and the Object-based supervised classification (t = 2.133 for a significance level of 0.05. However, the kappa index was 0.54. The analysis of the both segmentation and classification results did not prove to be replicable.

  19. Cell-Based Phenotyping Reveals QTL for Membrane Potential Maintenance Associated with Hypoxia and Salinity Stress Tolerance in Barley

    Directory of Open Access Journals (Sweden)

    Muhammad B. Gill

    2017-11-01

    Full Text Available Waterlogging and salinity are two major abiotic stresses that hamper crop production world-wide resulting in multibillion losses. Plant abiotic stress tolerance is conferred by many interrelated mechanisms. Amongst these, the cell’s ability to maintain membrane potential (MP is considered to be amongst the most crucial traits, a positive relationship between the ability of plants to maintain highly negative MP and its tolerance to both salinity and waterlogging stress. However, no attempts have been made to identify quantitative trait loci (QTL conferring this trait. In this study, the microelectrode MIFE technique was used to measure the plasma membrane potential of epidermal root cells of 150 double haploid (DH lines of barley (Hordeum vulgare L. from a cross between a Chinese landrace TX9425 and Japanese malting cultivar Naso Nijo under hypoxic conditions. A major QTL for the MP in the epidermal root cells in hypoxia-exposed plants was identified. This QTL was located on 2H, at a similar position to the QTL for waterlogging and salinity tolerance reported in previous studies. Further analysis confirmed that MP showed a significant contribution to both waterlogging and salinity tolerance. The fact that the QTL for MP was controlled by a single major QTL illustrates the power of the single-cell phenotyping approach and opens prospects for fine mapping this QTL and thus being more effective in marker assisted selection.

  20. ROLE OF GRAIN BOUNDARY CARBIDES IN CRACKING BEHAVIOR OF Ni BASE ALLOYS

    Directory of Open Access Journals (Sweden)

    SEONG SIK HWANG

    2013-02-01

    Full Text Available The primary water stress corrosion cracking (PWSCC of Alloy 600 in a PWR has been reported in the control rod drive mechanism (CRDM, pressurizer instrumentation, and the pressurizer heater sleeves. Recently, two cases of boric acid precipitation that indicated leaking of the primary cooling water were reported on the bottom head surface of steam generators (SG in Korea. The PWSCC resistance of Ni base alloys which have intergranular carbides is higher than those which have intragranular carbides. Conversely, in oxidized acidic solutions like sodium sulfate or sodium tetrathionate solutions, the Ni base alloys with a lot of carbides at the grain boundaries and shows less stress corrosion cracking (SCC resistance. The role of grain boundary carbides in SCC behavior of Ni base alloys was evaluated and effect of intergranular carbides on the SCC susceptibility were reviewed from the literature.

  1. Fine-grained vehicle type recognition based on deep convolution neural networks

    Directory of Open Access Journals (Sweden)

    Hongcai CHEN

    2017-12-01

    Full Text Available Public security and traffic department put forward higher requirements for real-time performance and accuracy of vehicle type recognition in complex traffic scenes. Aiming at the problems of great plice forces occupation, low retrieval efficiency, and lacking of intelligence for dealing with false license, fake plate vehicles and vehicles without plates, this paper proposes a vehicle type fine-grained recognition method based GoogleNet deep convolution neural networks. The filter size and numbers of convolution neural network are designed, the activation function and vehicle type classifier are optimally selected, and a new network framework is constructed for vehicle type fine-grained recognition. The experimental results show that the proposed method has 97% accuracy for vehicle type fine-grained recognition and has greater improvement than the original GoogleNet model. Moreover, the new model effectively reduces the number of training parameters, and saves computer memory. Fine-grained vehicle type recognition can be used in intelligent traffic management area, and has important theoretical research value and practical significance.

  2. Allelopathic effects of barley straw on germination and seedling growth of corn, sugar beet and sunflower

    Directory of Open Access Journals (Sweden)

    mohamad taghi naseri poor yazdi

    2009-06-01

    Full Text Available Allelopathic effects of barley straw and root on germination and growth of maize, sugar beet, and sunflower were investigated under glasshouse and laboratory experiments in Faculty of Agriculture, Ferdowsi University of Mashhad in 2006. The glasshouse experiment was designed based on randomized complete block design with three replications, treatments included: 0, 200, 400, 600 g/m² of grounded barley straw and also 0 and 50 g/m2 barley root. A laboratory experiment was carried out in order to study the effect of different concentrations of barley water extracts on germination and seedling characteristics of corn, sugar beet and sunflower. Treatments in laboratory trial included 0, 33, 50 and 100 percent of barley extracts. Results showed that leaf area of corn was significantly affected by barley straw treatments. Shoot dry matter and seed weight per plant in corn , leaf and tuber weight in sugar beet and leaf , stem weights , plant per plant in corn , leaf and tuber weight in sugar beet and leaf, stem weights, plant height, head diameter, head weight and seed weight in sunflower were significantly higher in treatment of 50g/m² barley roots. Crop seed germination decreased with increasing the amount of barley straw. The best germination response to barley extract was observed in corn. Maize radicle weight was significantly decreased with increasing concentration of barley water extract.

  3. Quantitative RT-PCR based platform for rapid quantification of the transcripts of highly homologous multigene families and their members during grain development

    DEFF Research Database (Denmark)

    Kaczmarczyk, Agnieszka Ewa; Bowra, Steve; Elek, Zoltan

    2012-01-01

    , subfamilies or individual members. The specificity of the primer sets was validated before successfully applying them to a cDNA population derived from developing grains of field grown Hordeum vulgare cv. Barke. The results quantify the number of moles of transcript contributed to a particular gene family...... to environmental stimuli. The method could be extended for cultivar recognition as some of the sequences from the database originated from cv. Golden Promise were not expressed in the studied barley cultivar Barke although showed primer specificity with their cloned DNA sequences...

  4. Purification and characterization of three chitinases and one beta-1,3-glucanase accumulating in the medium of cell suspension cultures of barley (Hordeum vulgare L.)

    DEFF Research Database (Denmark)

    Kragh, K.M.; Jacobsen, S.; Dalgaard Mikkelsen, J.

    1991-01-01

    -terminal sequence (24 residues) this enzyme was identified as the previously described beta-1,3-endoglucanase GII from germinating barley grain. The results suggest that secretion of chitinase and beta-1,3-glucanase from the embryogenic cell suspensions of barley corresponds to accumulation of the same enzymes...... chromatography. Two of the chitinases were identified as the previously described endochitinases T and C from barley grain. The third and novel chitinase, designated K, was the major basic chitinase in the medium constituting 4% of the soluble protein. Chitinase K was found to be a 33-kDa endochitinase with p......I at 8.7. Further analysis showed that this enzyme is also expressed in barley grain. The amino acid composition and five partial amino acid sequences covering 93 residues of chitinase K were determined. A high similarity was found between chitinase K and barley chitinase T and C as well as basic...

  5. Lithologic data improve plant species distribution models based on coarse-grained occurrence data

    Energy Technology Data Exchange (ETDEWEB)

    Gaston, A.; Soriano, C.; Gomez-Miguel, V.

    2009-07-01

    The aim of this study was to assess the improvement of plant species distribution models based on coarse-grained occurrence data when adding lithologic data to climatic models. The distributions of 40 woody plant species from continental Spain were modelled. A logistic regression model with climatic predictors was fitted for each species and compared to a second model with climatic and lithologic predictors. Improvements on model likelihood and prediction accuracy on validation sub samples were assessed, as well as the effect of calcicole calcifuge habit on model improvement. Climatic models had reasonable mean prediction accuracy, but adding lithologic data improved model likelihood in most cases and increased mean prediction accuracy. Therefore, we recommend utilizing lithologic data for species distribution models based on coarse-grained occurrence data. Our data did not support the hypothesis that calcicole calcifuge habit may explain model improvement when adding lithologic data to climatic models, but further research is needed. (Author) 31 refs.

  6. A review on flow characterization methods for cereal grain-based powders.

    Science.gov (United States)

    Ambrose, R P Kingsly; Jan, Shumaila; Siliveru, Kaliramesh

    2016-01-30

    Flow difficulties during handling, storage, and processing are common in cereal grain-based powder industries. The many studies that focus on the flow properties of powders can be classified as flow indicators, shear properties, and dynamic flow properties. The non-uniformity of physical and chemical characteristics of the individual particles that make up the bulk solid of cereal grain-based powders adds complexity to the characterization of flow behavior. Even so, knowledge of flow behavior is critical to the design of productive and cost-effective equipment for handling and processing of these powders. Because many factors influence flow, a single property/index value may not satisfactorily quantify the flow or no-flow of powders. For powders of biological origin, chemical composition and environmental factors such as temperature and relative humidity complicate flow characterization. This review focuses on the specific flow characteristics that directly affect powder flow during handling, processing, and storage. © 2015 Society of Chemical Industry.

  7. Redistribution of mineral elements in wheat grain when applying the complex enzyme preparations based on phytase

    Directory of Open Access Journals (Sweden)

    Elena Kuznetsova

    2016-01-01

    Full Text Available Biogenic minerals play an important role in the whole human nutrition, but they are included in the grain of the phytates that reduces their bioavailability. Whole wheat bread is generally considered a healthy food, but the presence of mineral elements in it is insignificant, because of weak phytate degradation. From all sources of exogenous phytase the most productive are microscopic fungi. To accelerate the process of transition hard mineral elements are mobilized to implement integrated cellulolytic enzyme preparation based on the actions of phytase (producer is Penicillium canescens. Phytase activity was assessed indirectly by the rate of release of phosphate from the substrate. It has been established that the release rate of the phosphoric acid substrate is dependent on the composition of the drug and the enzyme complex is determined by the presence of xylanase. The presented experimental data shows that a cellulase treatment of the grain in conjunction with the β-glucanase or xylanase leading to an increase in phytase activity could be 1.4 - 2.3 times as compared with the individual enzymes. As a result of concerted action of enzymes complex preparation varies topography grain, increase the pore sizes in seed and fruit shells that facilitate the penetration of the enzyme phytase in the aleurone layer to the site of phytin hydrolysis and leads to an increase in phytase activity. In terms of rational parameters of enzymatic hydrolysis, the distribution of mineral elements in the anatomical parts of the grain after processing complex enzyme preparation with the help of X-ray detector EMF miniCup system in a scanning electron microscope JEOL JSM 6390 were investigated. When processing enzyme preparation wheat trend in the distribution of mineral elements, characteristic of grain - the proportion of these elements in the aleurone layer decreases, and in the endosperm increases. Because dietary fiber and phytate found together in the

  8. [Specific features of fertility restoration in alloplasmic lines obtained based on hybridization of self-fertilized offspring of barley-wheat (Hordeum vulgare L. x Triticum aestivum L.) amphiploid with common wheat varieties Saratovskaya 29 and Pyrotrix 28].

    Science.gov (United States)

    Pershina, L A; Deviatkina, E P; Trubacheeva, N V; Kravtsova, L A; Dobrovol'skaia, O B

    2012-12-01

    The problems of fertility restoration in the progeny of barley-wheat hybrids (H. vulgare x T. aestivum) are explained by incompatibility between the cytoplasm of cultivated barley and the nuclear genome of common wheat. Suitable models for studying these problems are alloplasmic lines that combine the cytoplasm of barley and the nuclear genome of wheat. In this work, the specific features of fertility restoration in alloplasmic common wheat lines (H. vulgare)-T. aestivum were studied depending on the influence of wheat varieties Saratovskaya 29 (Sar29) and Pyrotrix 28 (Pyr28) used to produce these lines. The alloplasmic lines were created using hybrids between the 48-chromosome offspring (Amph1) of the barley-wheat amphiploid H. vulgare (ya-319) x T. aestivum (Sar29) and these wheat varieties. Backcrossing of the Amph1 (2n = 48) x Sar29 hybrid with the wheat variety Sar29 resulted in the complete sterility in the (H. vulgare)-Sar29 line, which suggests the incompatibility of the nuclear genome of the common wheat variety Sar29 with the cytoplasm of H. vulgare. Crossing of Amph1 (2n = 48) with Pyr28 resulted in the restoration of self-fertility in the hybrid with 2n = 44. In the alloplasmic lines (2n = 42) formed based on plants of the self-fertilized generations of this hybrid, the barley chromosomes were eliminated, and recombination between the nuclear genomes of the parental wheat varieties Sar29 and Pyr28 took place. Alloplasmic recombinant lines (H. vulgare)-T. aestivum with different levels of fertility were isolated. As was shown by the SSR analysis, differences in the fertility traits between these lines are determined by variations in the content of the genetic material from the wheat varieties Sar29 and Pyr28. The complete restoration of fertility in these alloplasmic recombinant lines is accompanied by the formation of a nuclear genome in which the genetic material of Pyr28 significantly prevails. The conclusion is made that the common wheat variety

  9. Effect of crop density on competition by wheat and barley with Agrostemma githago and other weeds

    DEFF Research Database (Denmark)

    Doll, H.; Holm, U.; Søgaard, B.

    1995-01-01

    The effect of Agrostemma githago L. and other naturally occurring weeds on biomass production and grain yield was studied in winter wheat and winter barley. Naturally occurring weeds had only a negligible effect on barley, but reduced wheat grain yield by 10% at a quarter of normal crop density....... The interaction between the cereals and A. githago was studied in additive series employing different crop densities. Growth of this weed species was strongly dependent on crop density, which was more important for controlling weed growth than it was for obtaining a normal grain yield. Wheat and especially barley...... had a better competitive ability than A. githago. Wheat and A. githago utilized resources for growth better when grown in mixture than when grown in pure stands as the relative yield totals were significantly larger than unity....

  10. Cereal bioengineering: Amylopectin-free and hyper-phosphorylated barley starch

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Shaik, Shahnoor Sultana; Jensen, Susanne Langgård

    2011-01-01

    Barley lines producing grains with either amylopectin-free or hyper-phosphorylated starches were made by transgenic methods. Cereals producing these kind of starches have not been reported before. Amylopectin-free barley was generated by simultaneously silencing the three genes encoding the starch...... branching enzymes SBEIIa, SBEIIb and SBEI by a chimeric hairpin. The construct was inherited as a single locus with a distinct 1:3 segregation in consecutive generations. The transgenic grains were shrunken and the yield was around 80% of that found in wildtype. The starch granules were irregularly......, elongated and globose shaped. Transgenic grains also had a higher beta-glucan content. In order to increase barley starch phosphorylation, endosperm specific overexpression of glucan water dikinase from potato (StGWD) was conducted. The content of phosphate esters in starch from consecutive generations (T0...

  11. Development Support Environment of Business ApplicationsBased on a Multi-Grain-Size Repository

    Science.gov (United States)

    Terai, Koichi; Izumi, Noriaki; Yamaguchi, Takahira

    In order to build the Web-based application as a shopping site on the Web, various ideas from the different viewpoints are required, such as enterprise modeling, workflow modeling, software development, and so on. From the above standpoint, this paper proposes an integrated environment to support the whole development process of analysis, design and implementation of business application. In order to reuse know-hows of various ideas in the business application development, we device a multi-grain-size repository, which consists of coarse-, middle-, and fine-grain-size repositories that correspond to the enterprise models, workflow models, and software models, respectively. We also provide a methodology that rebuilds heterogeneous information resources required for the business applications development into a multi-grain-size repository based on ontologies. The contents of the repositories are modeled by the is-a, has-a, and E-R relations, and described by the XML language. We have implemented Java-based prototype environment with the tools dealing with the multi-layered repository and confirmed that it supports us in various phases of business application development including business model manifestation, detailed business model definition and an implementation of business software applications.

  12. Model reduction for agent-based social simulation: Coarse-graining a civil violence model

    Science.gov (United States)

    Zou, Yu; Fonoberov, Vladimir A.; Fonoberova, Maria; Mezic, Igor; Kevrekidis, Ioannis G.

    2012-06-01

    Agent-based modeling (ABM) constitutes a powerful computational tool for the exploration of phenomena involving emergent dynamic behavior in the social sciences. This paper demonstrates a computer-assisted approach that bridges the significant gap between the single-agent microscopic level and the macroscopic (coarse-grained population) level, where fundamental questions must be rationally answered and policies guiding the emergent dynamics devised. Our approach will be illustrated through an agent-based model of civil violence. This spatiotemporally varying ABM incorporates interactions between a heterogeneous population of citizens [active (insurgent), inactive, or jailed] and a population of police officers. Detailed simulations exhibit an equilibrium punctuated by periods of social upheavals. We show how to effectively reduce the agent-based dynamics to a stochastic model with only two coarse-grained degrees of freedom: the number of jailed citizens and the number of active ones. The coarse-grained model captures the ABM dynamics while drastically reducing the computation time (by a factor of approximately 20).

  13. Determination of Local Barley (Hordeum Vulgare) Crop Coefficient ...

    African Journals Online (AJOL)

    The average economic water productivity (EWP) of barley for the very wet, wet, normal, dry and very dry seasons scenario were 0.99, 0.7, 0.65, 0.57, and 0.44 USD m-3, respectively, whereas the corresponding crop water productivity (CWP) values for grain were 1.53, 1.08, 1.0, 0.88 and 0.68 kg m-3, respectively. The EWP ...

  14. Ethnobotany, diverse food uses, claimed health benefits and implications on conservation of barley landraces in North Eastern Ethiopia highlands.

    Science.gov (United States)

    Shewayrga, Hailemichael; Sopade, Peter A

    2011-06-28

    Barley is the number one food crop in the highland parts of North Eastern Ethiopia produced by subsistence farmers grown as landraces. Information on the ethnobotany, food utilization and maintenance of barley landraces is valuable to design and plan germplasm conservation strategies as well as to improve food utilization of barley. A study, involving field visits and household interviews, was conducted in three administrative zones. Eleven districts from the three zones, five kebeles in each district and five households from each kebele were visited to gather information on the ethnobotany, the utilization of barley and how barley end-uses influence the maintenance of landrace diversity. According to farmers, barley is the "king of crops" and it is put for diverse uses with more than 20 types of barley dishes and beverages reportedly prepared in the study area. The products are prepared from either boiled/roasted whole grain, raw- and roasted-milled grain, or cracked grain as main, side, ceremonial, and recuperating dishes. The various barley traditional foods have perceived qualities and health benefits by the farmers. Fifteen diverse barley landraces were reported by farmers, and the ethnobotany of the landraces reflects key quantitative and qualitative traits. Some landraces that are preferred for their culinary qualities are being marginalized due to moisture shortage and soil degradation. Farmers' preference of different landraces for various end-use qualities is one of the important factors that affect the decision process of landraces maintenance, which in turn affect genetic diversity. Further studies on improving maintenance of landraces, developing suitable varieties and improving the food utilization of barley including processing techniques could contribute to food security of the area.

  15. Fine-Grained Human Evaluation of Neural Versus Phrase-Based Machine Translation

    Directory of Open Access Journals (Sweden)

    Klubička Filip

    2017-06-01

    Full Text Available We compare three approaches to statistical machine translation (pure phrase-based, factored phrase-based and neural by performing a fine-grained manual evaluation via error annotation of the systems’ outputs. The error types in our annotation are compliant with the multidimensional quality metrics (MQM, and the annotation is performed by two annotators. Inter-annotator agreement is high for such a task, and results show that the best performing system (neural reduces the errors produced by the worst system (phrase-based by 54%.

  16. A Genetic Based Neuro Fuzzy Technique for Process Grain Sized Scheduling of Parallel Jobs

    OpenAIRE

    Keppanagowder Thanushkodi; Sadasivam V. Sudha

    2012-01-01

    Problem statement: In this study, we present the development of genetic algorithm based neuro fuzzy technique for process grain sized in scheduling of parallel jobs with the help of real lIfe workload data. Approach: The study uses the rule based scheduling strategy for the scheduling and classIfies all possible scheduling strategies. The rule bases are developed with the help of the neuro fuzzy system and with the genetic fuzzy system. From the comparison of the two classIfiers of the fuzzy ...

  17. Comparative energy content and amino acid digestibility of barley obtained from diverse sources fed to growing pigs

    Directory of Open Access Journals (Sweden)

    Hong Liang Wang

    2017-07-01

    Full Text Available Objective Two experiments were conducted to determine the content of digestible energy (DE and metabolizable energy (ME as well as the apparent ileal digestibility (AID and standardized ileal digestibility (SID of crude protein (CP and amino acids (AA in barley grains obtained from Australia, France or Canada. Methods In Exp. 1, 18 growing barrows (Duroc×Landrace×Yorkshire; 31.5±3.2 kg were individually placed in stainless-steel metabolism crates (1.4×0.7×0.6 m and randomly allotted to 1 of 3 test diets. In Exp. 2, eight crossbred pigs (30.9±1.8 kg were allotted to a replicate 3×4 Youden Square designed experiment with three periods and four diets. Two pigs received each diet during each test period. The diets included one nitrogen-free diet and three test diets. Results The relative amounts of gross energy (GE, CP, and all AA in the Canadian barley were higher than those in Australian and French barley while higher concentrations of neutral detergent fiber, acid detergent fiber, total dietary fiber, insoluble dietary fiber and β-glucan as well as lower concentrations of GE and ether extract were observed in the French barley compared with the other two barley sources. The DE and ME as well as the SID of histidine, isoleucine, leucine and phenylalanine in Canadian barley were higher (p<0.05 than those in French barley but did not differ from Australian barley. Conclusion Differences in the chemical composition, energy content and the SID and AID of AA were observed among barley sources obtained from three countries. The feeding value of barley from Canada and Australia was superior to barley obtained from France which is important information in developing feeding systems for growing pigs where imported grains are used.

  18. Evaluation of a miniaturized NIR spectrometer for cultivar identification: The case of barley, chickpea and sorghum in Ethiopia.

    Science.gov (United States)

    Kosmowski, Frédéric; Worku, Tigist

    2018-01-01

    Crop cultivar identification is fundamental for agricultural research, industry and policies. This paper investigates the feasibility of using visible/near infrared hyperspectral data collected with a miniaturized NIR spectrometer to identify cultivars of barley, chickpea and sorghum in the context of Ethiopia. A total of 2650 grains of barley, chickpea and sorghum cultivars were scanned using the SCIO, a recently released miniaturized NIR spectrometer. The effects of data preprocessing techniques and choosing a machine learning algorithm on distinguishing cultivars are further evaluated. Predictive multiclass models of 24 barley cultivars, 19 chickpea cultivars and 10 sorghum cultivars delivered an accuracy of 89%, 96% and 87% on hold-out sample. The Support Vector Machine (SVM) and Partial least squares discriminant analysis (PLS-DA) algorithms consistently outperformed other algorithms. Several cultivars, believed to be widely adopted in Ethiopia, were identified with perfect accuracy. These results advance the discussion on cultivar identification survey methods by demonstrating that miniaturized NIR spectrometers represent a low-cost, rapid and viable tool. We further discuss the potential utility of the method for adoption surveys, field-scale agronomic studies, socio-economic impact assessments and value chain quality control. Finally, we provide a free tool for R to easily carry out crop cultivar identification and measure uncertainty based on spectral data.

  19. Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue

    Directory of Open Access Journals (Sweden)

    Usadel Björn

    2007-05-01

    Full Text Available Abstract Background Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, faithful visualization methods are beneficial for revealing interesting gene expression patterns and functional relationships of coexpressed genes. Such screening helps to gain deeper insights into regulatory behavior and cellular responses, as will be discussed for expression data of developing barley endosperm tissue. For that purpose, high-throughput multidimensional scaling (HiT-MDS, a recent method for similarity-preserving data embedding, is substantially refined and used for (a assessing the quality and reliability of centroid gene expression patterns, and for (b derivation of functional relationships of coexpressed genes of endosperm tissue during barley grain development (0–26 days after flowering. Results Temporal expression profiles of 4824 genes at 14 time points are faithfully embedded into two-dimensional displays. Thereby, similar shapes of coexpressed genes get closely grouped by a correlation-based similarity measure. As a main result, by using power transformation of correlation terms, a characteristic cloud of points with bipolar sandglass shape is obtained that is inherently connected to expression patterns of pre-storage, intermediate and storage phase of endosperm development. Conclusion The new HiT-MDS-2 method helps to create global views of expression patterns and to validate centroids obtained from clustering programs. Furthermore, functional gene annotation for developing endosperm barley tissue is successfully mapped to the visualization, making easy localization of major centroids of enriched functional categories possible.

  20. Sanitary state and yielding of spring barley as dependent on soil tillage method

    Directory of Open Access Journals (Sweden)

    Tomasz P. Kurowski

    2012-12-01

    Full Text Available The effects of traditional tillage cultivation (control treatment, no tillage (instead of tillage the soil was loosened with scruff, and direct sowing (with a special drill into unploughed soil on the health of spring barley cultivar. Klimek were compared in three-field crop rotation (field bean, winter wheat, spring barley in an experiment performed in the years 1997-1999 on the soil of a good wheat complex. The results of phytopathological observations carried out over the vegetation season are presented in the form of an injury index. The following diseases were recorded on spring barley: net blotch (Drechslera teres - net type and spot type, powdery mildew (Blumeria graminis, leaf blotch (Rhynchosporium secalis, eyespot (Tapesia yallundae and foot rot (fungal complex. Tillage system had no a significant influence on the occurrence of both types of net blotch. The intensity of powdery mildew and leaf blotch was the highest in the case of traditional tillage cultivation, and the lowest - in that of no tillage. Direct sowing was conductive to the development of eyespot, and no tillage - to foot rot. Fungi of the genus Fusarium, mainly F. culmorum, and the species Bipolaris sorokiniana, were isolated most frequently from infested stem bases. The weather conditions differed during spring barley grown in the three years analyzed. Mean air temperature in 1997 and 1998 was similar to the many-year average for the city of Olsztyn and its surroundings (13.8°C. In the vegetation season 1999 mean air temperature reached 14.6°C, and was considerably higher than the many-year average. Taking into account total precipitation and distribution in the three-year experimental cycle, 1997 and 1998 can be considered average, and 1999 - wet.The weather conditions had a significant effect on the intensity of all diseases observed on spring barley. The highest yield grain was obtained in the case of traditional tillage cultivation (on average 3.06 t·ha-1 for the

  1. Yield and yield structure of spring barley (Hodeum vulgare L. grown in monoculture after different stubble crops

    Directory of Open Access Journals (Sweden)

    Dorota Gawęda

    2012-12-01

    Full Text Available A field experiment was conducted in the period 2006- 2008 in the Uhrusk Experimental Farm belonging to the University of Life Sciences in Lublin. The experimental factor was the type of stubble crop ploughed in each year after harvest of spring barley: white mustard, lacy phacelia, winter rape, and a mixture of narrow-leaf lupin with field pea. In the experiment, successive spring barley crops were grown one after the other (in continuous monoculture. The aim of the experiment was to evaluate the effect of stubble crops used on the size and structure of barley yield. The three-year study showed an increasing trend in grain yield of spring barley grown after the mixture of legumes, lacy phacelia, and white mustard compared to its size in the treatment with no cover crop. Straw yield was significantly higher when barley was grown after the mixture of narrowleaf lupin with field pea than in the other treatments of the experiment. The type of ploughed-in stubble crop did not modify significantly plant height, ear length, and grain weight per ear. Growing the mixture of leguminous plants as a cover crop resulted in a significant increase in the density of ears per unit area in barley by an average of 14.7% relative to the treatment with winter rape. The experiment also showed the beneficial effect of the winter rape cover crop on 1000-grain weight of spring barley compared to that obtained in the treatments with white mustard and the mixture of legumes. All the cover crops caused an increase in the number of grains per ear of barley relative to that found in the control treatment. However, this increase was statistically proven only for the barley crops grown after lacy phacelia and the mixture of legumes.

  2. Defect distribution in deformed grains of Cu-based alloy polycrystals

    Science.gov (United States)

    Koneva, N. A.; Trishkina, L. I.; Cherkasova, T. V.

    2017-12-01

    The paper presents transmission electron microscopy data on the grain defect structure formed in deformed Cu-Al polycrystals. The data show that the parameters of dislocation substructures vary with distance from grain boundaries and that a hardened zone arises near the grain boundaries and its size depends on the grain size.

  3. High-throughput Agrobacterium-mediated barley transformation

    Directory of Open Access Journals (Sweden)

    Snape John W

    2008-09-01

    Full Text Available Abstract Background Plant transformation is an invaluable tool for basic plant research, as well as a useful technique for the direct improvement of commercial crops. Barley (Hordeum vulgare is the fourth most abundant cereal crop in the world. It also provides a useful model for the study of wheat, which has a larger and more complex genome. Most existing barley transformation methodologies are either complex or have low ( Results A robust, simple and reproducible barley transformation protocol has been developed that yields average transformation efficiencies of 25%. This protocol is based on the infection of immature barley embryos with Agrobacterium strain AGL1, carrying vectors from the pBract series that contain the hpt gene (conferring hygromycin resistance as a selectable marker. Results of large scale experiments utilising the luc (firefly luciferase gene as a reporter are described. The method presented here has been used to produce hundreds of independent, transgenic plant lines and we show that a large proportion of these lines contain single copies of the luc gene. Conclusion This protocol demonstrates significant improvements in both efficiency and ease of use over existing barley transformation methods. This opens up opportunities for the development of functional genomics resources in barley.

  4. Therapeutic evaluation of grain based functional food formulation in a geriatric animal model.

    Science.gov (United States)

    Teradal, Deepa; Joshi, Neena; Aladakatti, Ravindranath H

    2017-08-01

    This study investigates the effect of wholesome grain based functional food formulation, on clinical and biochemical parameters in 24-30 months old Wistar albino geriatric rats, corresponding to human age 60-75 years. Animals were randomly divided into five, groups. Experimental diets were compared to the basal rat diet (Group I). Four food, formulation were-wheat based (Group II), finger millet based (Group III), wheat based, diet + fenugreek seed powder (Group IV), finger millet based diet + fenugreek powder, (Group V). These five types of diets were fed to the experimental rats for 6 weeks. Hematological and biochemical parameters were evaluated. The results showed that, feed intake was influenced by the type of feed. Diets supplemented with, fenugreek (Group IV) caused a significant increase in serum hemoglobin. The total serum protein values were significantly highest in Group III. Total serum albumin was found to be lower in Group I and highest in Group II. The concentration of BUN was highest in Group I and the lowest in control diet. Serum cholesterol and glucose were significantly reduced in Group IV. Several hematological and serum mineral values were influenced by the type of diet. The type of diet did not influence the organs weight. A moderate hypoglycemic and hypercholesterolemic effect was observed in composite mix fed rats. This study clearly justifies the recommendation to use wholesome grain based functional foods for geriatric population.

  5. Evaluation of a method based on image analysis to obtain shape parameters in crushed sand grains

    Directory of Open Access Journals (Sweden)

    A. G. Goldoni

    Full Text Available ABSTRACTThe objective of this paper is to evaluate a method based on image analysis to obtain shape parameters in crushed sand grains. There is no consensus about standards and rules for testing aggregates, the lack of methodology to prepare and conduct tests may produce incorrect results, which do not satisfactorily represent the aggregate characteristics. One way to perform these analyzes is the use of images obtained with magnifying glasses or similar equipment. To contribute to this, three experiments were prepared with samples of crushed sand from the city of Passo Fundo. The fixed and evaluated parameters were: samples preparation, zoom used for image acquisition and number of grains representative of the shape parameters. The results were statistically analyzed and significant differences were obtained to the shape factor regarding the fixed parameters, except for the number of grains needed to characterize it, which differs from the currently literature used by academic studies. According to this work it is possible to realize that it is necessary to standardize the tests for shape analysis to eliminate errors generated by the interpretation of incorrect results, which may have been generated by changes in the methodology for conducting the tests.

  6. Climate Change Effects to Plant Ecosystems - Genetic Resources for Future Barley Breeding

    DEFF Research Database (Denmark)

    Ingvordsen, Cathrine Heinz

    ([O3]), rising temperatures and extreme climate events such as floods, storms and heatwaves. These predictions are compounded by the projections from the Intergovernmental Panel on Climate Change, which state that the world is heading towards a worst-case climate scenario unless actions are taken......) elevated temperature and [CO2] in combination and 3) a 10 day-heatwave (33 °C) around the time of flowering in addition to elevated levels of temperature and [CO2]. The responses in grain yield, number of grains, number of ears, biomass, harvest index, grain protein concentration and stability over...... yield of barley was found to decrease by 29 % and harvested grain protein by 22 %. With an additional 10 dayheatwave around flowering grain yield was decreased by 52 %, revealing sombre forecasts to the future primary production. However, vast variation was identified within the individual barley...

  7. Effect of cooked white rice with high β-glucan barley on appetite and energy intake in healthy Japanese subjects: a randomized controlled trial.

    Science.gov (United States)

    Aoe, Seiichiro; Ikenaga, Takeshi; Noguchi, Hiroki; Kohashi, Chieko; Kakumoto, Keiji; Kohda, Noriyuki

    2014-12-01

    White rice is a dominant grain-based food in Japan, but excess intake of polished rice may cause obesity. Barley is a grain-based food, similar to white rice, but it has the potential to control appetite and reduce energy intake. We investigated the effect of cooked white rice with high β-glucan barley on appetite and energy intake. The study was conducted as a randomized crossover design with twenty-one healthy Japanese women [mean ± standard deviation body mass index (BMI) 23.3 ± 0.7 kg/m(2)]. Subjects consumed a breakfast of cooked white rice with high β-glucan barley (BAR) or white rice (WR), followed by an ad libitum lunch and dinner. Energy intake was measured at the lunch and the dinner using plate waste. Subjects' perception scores on hunger, fullness, satiety, and prospective food consumption were assessed using a visual analogue scale (VAS) before and after the breakfast, lunch and dinner. BAR significantly reduced the VAS scores of hunger and prospective food consumption, and increased fullness before lunch compared to WR (P = 0.032, 0.019 and 0.038, respectively). Energy intake at lunch and the cumulative energy intake (lunch + dinner) subsequent to BAR consumption were significantly lower than WR (P = 0.035 and 0.021, respectively). BAR was able to modulate appetite and reduce energy intake. The combination of white rice with high β-glucan barley could play a beneficial role in preventing and treating obesity and other obesity-related metabolic diseases.

  8. Aminopeptidases of Germinated and Non-Germinated Barley

    Directory of Open Access Journals (Sweden)

    Bojana Vukelić

    2009-01-01

    Full Text Available In processes of barley plant development, various endo- and exopeptidases are involved. To determine the type and number of aminopeptidases that could participate in barley seed germination and tissue growth, their activities in extracts of non-germinated and germinated barley (Hordeum vulgare L. cv. Angora grains and young tissues have been examined, and some of their properties determined. Aminopeptidases (AP hydrolysing 2-naphthylamides of various amino acids were present in dry and germinated grains, roots, seedlings and leaves, showing preferences for amino acids phenylalanine (Phe, arginine (Arg, leucine (Leu and methionine (Met, and lower activity towards alanine (Ala, proline (Pro, glycine (Gly and histidine (His. Levels and ratios of AP activities changed during germination and tissue development, indicating that APs of different specificities are required at different stages of germination and in young tissues. Thus, the increase of all aminopeptidase activities during the first 24 hours of germination and subsequent decrease show significant involvement in seed primary metabolism restoration. The activities of Arg- and HisAP are equally important in green malt. Seedlings and leaves have pronounced substrate specificity for Phe, Leu, Ala and Pro, while roots have the lowest AP specific activities. From the activities and determined properties, the presence of at least six aminopeptidases optimally active at pH=7.4–8.2 could be discerned in dry and germinated grains, and young tissues of Angora barley. Two aminopeptidases are most probably of broad substrate specificity, three show narrow preference with dominating Leu, Phe, or Pro/His, while one is specific for Arg.

  9. Barley yellow dwarf virus

    Science.gov (United States)

    Paulmann, Maria K; Kunert, Grit; Zimmermann, Matthias R; Theis, Nina; Ludwig, Anatoli; Meichsner, Doreen; Oelmüller, Ralf; Gershenzon, Jonathan; Habekuss, Antje; Ordon, Frank; Furch, Alexandra C U; Will, Torsten

    2018-01-01

    Barley yellow dwarf virus (BYDV) is a phloem limited virus that is persistently transmitted by aphids. Due to huge yield losses in agriculture, the virus is of high economic relevance. Since the control of the virus itself is not possible, tolerant barley genotypes are considered as the most effective approach to avoid yield losses. Although several genes and quantitative trait loci are known and used in barley breeding for virus tolerance, little is known about molecular and physiological backgrounds of this trait. Therefore, we compared the anatomy and early defense responses of a virus susceptible to those of a virus-tolerant cultivar. One of the very early defense responses is the transmission of electrophysiological reactions. Electrophysiological reactions to BYDV infection might differ between susceptible and tolerant cultivars, since BYDV causes disintegration of sieve elements in susceptible cultivars. The structure of vascular bundles, xylem vessels and sieve elements was examined using microscopy. All three were significantly decreased in size in infected susceptible plants where the virus causes disintegration of sieve elements. This could be associated with an uncontrolled ion exchange between the sieve-element lumen and apoplast. Further, a reduced electrophysiological isolation would negatively affect the propagation of electrophysiological reactions. To test the influence of BYDV infection on electrophysiological reactions, electropotential waves (EPWs) induced by leaf-tip burning were recorded using aphids as bioelectrodes. EPWs in infected susceptible plants disappeared already after 10 cm in contrast to those in healthy susceptible or infected tolerant or healthy tolerant plants. Another early plant defense reaction is an increase in reactive oxygen species (ROS). Using a fluorescent dye, we found a significant increase in ROS content in infected susceptible plants but not in infected tolerant plants. Similar results were found for the

  10. Genetic Diversity in Barley and Wheat for Tolerance to Soil Constraints

    Directory of Open Access Journals (Sweden)

    Yash P. Dang

    2016-11-01

    Full Text Available Surface soil sodicity as well as subsoil salinity, acidity, and phytotoxic concentrations of chloride (Cl are major soil constraints to crop production in many soils of sub-tropical, north-eastern Australia. The identification of genotypes tolerant to these soil constraints may be an option to maintain and improve productivity on these soils. We evaluated performance of 11 barley and 17 wheat genotypes grown on two sites <0.5 km apart. Compared to the non-sodic site, the sodic site had significantly higher Cl concentration (>800 mg·Cl·kg−1 in the subsoil (0.9–1.3 m soil depth and higher exchangeable sodium percentage (ESP (>6% in the surface and subsoil. Barley grain yield and plant available water capacity (PAWC were reduced between 5%–25% and 40%–66%, respectively, for different genotypes at the sodic site as compared to the non-sodic site. For wheat genotypes, grain yield was between 8% and 33% lower at the sodic site compared to the non-sodic site and PAWC was between 3% and 37% lower. Most barley and wheat genotypes grown at the sodic site showed calcium (Ca deficiency symptoms on younger leaves. Analysis of the youngest fully mature leaf (YML confirmed that genotypes grown at the sodic site with Ca concentration < 0.2% exhibited deficiency symptoms. Grain yields of both barley and wheat genotypes grown on the sodic and non-sodic sites increased significantly with increasing Ca and K in YML and decreased significantly with increasing Na and Cl concentrations in YML. Sodium (Na concentrations in YML of wheat genotypes grown at the sodic site were 10-fold higher than those from the non-sodic site whereas this increase was only two-fold in barley genotypes. In step-wise regression, the PAWC of barley and wheat genotypes grown on sodic and non-sodic sites was the principal determinant of variability of barley and wheat grain yield. Including the Ca concentration in the YML of wheat genotypes and K:Na ratio in the YML of barley

  11. Barley Transformation Using Biolistic Techniques

    Science.gov (United States)

    Harwood, Wendy A.; Smedley, Mark A.

    Microprojectile bombardment or biolistic techniques have been widely used for cereal transformation. These methods rely on the acceleration of gold particles, coated with plasmid DNA, into plant cells as a method of directly introducing the DNA. The first report of the generation of fertile, transgenic barley plants used biolistic techniques. However, more recently Agrobacterium-mediated transformation has been adopted as the method of choice for most cereals including barley. Biolistic procedures are still important for some barley transformation applications and also provide transient test systems for the rapid checking of constructs. This chapter describes methods for the transformation of barley using biolistic procedures and also highlights the use of the technology in transient assays.

  12. Proposal for the Identification of Barley Varieties Based on the Genotypes for 2 Hordein and 39 Isoenzym Loci of 47 Reference Varieties

    DEFF Research Database (Denmark)

    Nielsen, G.; Johansen, Hanne Bay

    1986-01-01

    Fifty-nine spring and 7 winter barley varieties in lsquoThe Danish List of Varieties of Agricultural Crops, 1983/84rsquo were examined for variation at 39 isoenzyme and two hordein loci. Twenty-three isoenzyme loci had one allele only, and 16 loci had from two to five alleles. One hordein locus had...

  13. Characterization of a Thermo-Inducible Chlorophyll-Deficient Mutant in Barley

    Directory of Open Access Journals (Sweden)

    Rong Wang

    2017-11-01

    Full Text Available Leaf color is an important trait for not only controlling crop yield but also monitoring plant status under temperature stress. In this study, a thermo-inducible chlorophyll-deficient mutant, named V-V-Y, was identified from a gamma-radiated population of the barley variety Vlamingh. The leaves of the mutant were green under normal growing temperature but turned yellowish under high temperature in the glasshouse experiment. The ratio of chlorophyll a and chlorophyll b in the mutant declined much faster in the first 7–9 days under heat treatment. The leaves of V-V-Y turned yellowish but took longer to senesce under heat stress in the field experiment. Genetic analysis indicated that a single nuclear gene controlled the mutant trait. The mutant gene (vvy was mapped to the long arm of chromosome 4H between SNP markers 1_0269 and 1_1531 with a genetic distance of 2.2 cM and a physical interval of 9.85 Mb. A QTL for grain yield was mapped to the same interval and explained 10.4% of the yield variation with a LOD score of 4. This QTL is coincident with the vvy gene interval that is responsible for the thermo-inducible chlorophyll-deficient trait. Fine mapping, based on the barley reference genome sequence, further narrowed the vvy gene to a physical interval of 0.428 Mb with 11 annotated genes. This is the first report of fine mapping a thermo-inducible chlorophyll-deficient gene in barley.

  14. Genome-wide association study of stem rust resistance in a world collection of cultivated barley.

    Science.gov (United States)

    Case, Austin J; Bhavani, Sridhar; Macharia, Godwin; Steffenson, Brian J

    2018-01-01

    QTL conferring a 14-40% reduction in adult plant stem rust severity to multiple races of Pgt were found on chromosome 5H and will be useful in barley breeding. Stem rust, caused by Puccinia graminis f. sp. tritici (Pgt) is an important disease of barley. The resistance gene Rpg1 has protected the crop against stem rust losses for over 70 years in North America, but is not effective against the African Pgt race TTKSK (and its variants) nor the domestic race QCCJB. To identify resistance to these Rpg1-virulent races, the Barley iCore Collection, held by the United States Department of Agriculture-Agricultural Research Service National Small Grains Collection was evaluated for adult plant resistance (APR) and seedling resistance to race TTKSK and APR to race QCCJB and the Pgt TTKSK composite of races TTKSK, TTKST, TTKTK, and TTKTT. Using a genome-wide association study approach based on 6224 single nucleotide polymorphic markers, seven significant loci for stem rust resistance were identified on chromosomes 1H, 2H, 3H, and 5H. The most significant markers detected were 11_11355 and SCRI_RS_177017 at 71-75 cM on chromosome 5H, conferring APR to QCCJB and TTKSK composite. Significant markers were also detected for TTKSK seedling resistance on chromosome 5H. All markers detected on 5H were independent of the rpg4/Rpg5 complex at 152-168 cM. This study verified the importance of the 11_11355 locus in conferring APR to races QCCJB and TTKSK and suggests that it may be effective against other races in the Ug99 lineage.

  15. A web-based calculator for estimating the profit potential of grain segregation by protein concentration

    Science.gov (United States)

    By ignoring spatial variability in grain quality, conventional harvesting systems may increase the likelihood that growers will not capture price premiums for high quality grain found within fields. The Grain Segregation Profit Calculator was developed to demonstrate the profit potential of segregat...

  16. Yield improvement in barley by using gamma-irradiation

    International Nuclear Information System (INIS)

    Benamer, Ibrahim Mohammed

    1990-01-01

    Breeding work for barley improvement in Libya is very rare. All varieties grown here are foreign varieties. Yield per hectare is low compared with other countries having similar climatic conditions. Productivity, lodging, disease resistance, drought and salt tolerance are the main characteristics that need to be improved. A mutation breeding programme for barley improvement was initiated at the Tajoura Nuclear Research Centre in 1983-1984. The objectives of this programme are the development of new lines that could be used directly or indirectly in the development of new varieties. The locally adapted barley (Hordeum vulgare L.) variety ''California Mariout'' was used as a parent material. Grains with 14% moisture were exposed to 200 Gy gamma-ray from 60 Co source at the Centre. Three experiments were conducted during 1986-1989. From the first experiment (1986-1987), 62 mutant lines were evaluated. From the second and third experiments (1987-1989), only seven mutant lines were evaluated. In the 1988-1989 experiment, the crop was irrigated and fertilised with 0, 100 and 200 kgN/ha. Lodging score was low in 0 kgN/ha and increased significantly by the increase in N level. None of the mutant lines more lodging resistant than the parent or the control. However, yield differences were significant and the application of 100 kgN/ha increased the grain yield

  17. Critical yield-point model to estimate damage caused by brown spot and powdery mildew in barley

    Directory of Open Access Journals (Sweden)

    Lenita Agostinetto

    2014-06-01

    Full Text Available Barley (Hordeum vulgaris L. is the second most important winter crop in Southern Brazil. The excessive rainfall in this region during the crop-growing season increases the frequency and intensity of foliar fungal diseases. The research aimed to determine the damage function equations (DFE for the multiple pathosystem of barley brown spot and powdery mildew based on the relationship between grain yield and diseases intensity at different 'BRS Cauê' cultivar growth stages (GS during 2009 and 2010 growing seasons in Southern Brazil. The experiments were arranged in a randomized complete block design with nine treatments and four replicates. The disease gradients were generated by strobilurins and triazols fungicides rates and number of applications on barley cv. Cauê. The fungicide applications and disease incidence and severity assessments were performed at the 22, 31, 39, 45 and 56 plant GS. The DFE were obtained by variance analysis and linear regression between grain yield and diseases intensity. Significant and negative DFE were obtained and the damage coefficients (DC varied from 29.48 to 100.08 (2009 and from 36.08 to 113.57kg ha-1 (2010 for incidence, and from 219.5 to 6,276.6 (2009 and 102.3 to 5,292.5kg ha-1 (2010 for severity. The largest damage coefficients were obtained when diseases assessments were made on GS 22 and 31 on both growing seasons evaluated. DFE were used to calculate the economic damage threshold (EDT as a criterion to indicate the fungicide application moment to control the diseases in cultivars similar to 'BRS Cauê' in Southern Brazil.

  18. Canopy Chlorophyll Density Based Index for Estimating Nitrogen Status and Predicting Grain Yield in Rice

    Directory of Open Access Journals (Sweden)

    Xiaojun Liu

    2017-10-01

    Full Text Available Canopy chlorophyll density (Chl has a pivotal role in diagnosing crop growth and nutrition status. The purpose of this study was to develop Chl based models for estimating N status and predicting grain yield of rice (Oryza sativa L. with Leaf area index (LAI and Chlorophyll concentration of the upper leaves. Six field experiments were conducted in Jiangsu Province of East China during 2007, 2008, 2009, 2013, and 2014. Different N rates were applied to generate contrasting conditions of N availability in six Japonica cultivars (9915, 27123, Wuxiangjing 14, Wuyunjing 19, Yongyou 8, and Wuyunjing 24 and two Indica cultivars (Liangyoupei 9, YLiangyou 1. The SPAD values of the four uppermost leaves and LAI were measured from tillering to flowering growth stages. Two N indicators, leaf N accumulation (LNA and plant N accumulation (PNA were measured. The LAI estimated by LAI-2000 and LI-3050C were compared and calibrated with a conversion equation. A linear regression analysis showed significant relationships between Chl value and N indicators, the equations were as follows: PNA = (0.092 × Chl − 1.179 (R2 = 0.94, P < 0.001, relative root mean square error (RRMSE = 0.196, LNA = (0.052 × Chl − 0.269 (R2 = 0.93, P < 0.001, RRMSE = 0.185. Standardized method was used to quantity the correlation between Chl value and grain yield, normalized yield = (0.601 × normalized Chl + 0.400 (R2 = 0.81, P < 0.001, RRMSE = 0.078. Independent experimental data also validated the use of Chl value to accurately estimate rice N status and predict grain yield.

  19. Genome-Wide Prediction of the Performance of Three-Way Hybrids in Barley

    Directory of Open Access Journals (Sweden)

    Zuo Li

    2017-03-01

    Full Text Available Predicting the grain yield performance of three-way hybrids is challenging. Three-way crosses are relevant for hybrid breeding in barley ( L. and maize ( L. adapted to East Africa. The main goal of our study was to implement and evaluate genome-wide prediction approaches of the performance of three-way hybrids using data of single-cross hybrids for a scenario in which parental lines of the three-way hybrids originate from three genetically distinct subpopulations. We extended the ridge regression best linear unbiased prediction (RRBLUP and devised a genomic selection model allowing for subpopulation-specific marker effects (GSA-RRBLUP: general and subpopulation-specific additive RRBLUP. Using an empirical barley data set, we showed that applying GSA-RRBLUP tripled the prediction ability of three-way hybrids from 0.095 to 0.308 compared with RRBLUP, modeling one additive effect for all three subpopulations. The experimental findings were further substantiated with computer simulations. Our results emphasize the potential of GSA-RRBLUP to improve genome-wide hybrid prediction of three-way hybrids for scenarios of genetically diverse parental populations. Because of the advantages of the GSA-RRBLUP model in dealing with hybrids from different parental populations, it may also be a promising approach to boost the prediction ability for hybrid breeding programs based on genetically diverse heterotic groups.

  20. Properties of grain boundaries in BCC iron and iron-based alloys

    Energy Technology Data Exchange (ETDEWEB)

    Terentyev, D.; He, Xinfu

    2010-08-15

    The report contains a summary of work done within the collaboration established between SCK-CEN and CIEA, performed during the internship of Xinfu He (CIAE) in the period of September 2009 to June 2010. In this work, we have carried out an atomistic study addressing the properties of grain boundaries in BCC Fe and Fe-Cr alloys. Throughout this work we report on the structural and cohesive properties of grain boundaries; thermal stability; interaction of grain boundaries with He and diffusivity of He in the core of the grain boundaries; equilibrium segregation of Cr near the grain boundary zone; cleavage fracture of grain boundaries; influence of the Cr precipitates, voids and He bubbles on the structure and strength of grain boundaries.

  1. On fast iterative mapping algorithms for stripe based coarse-grained reconfigurable architectures

    Science.gov (United States)

    Mehta, Gayatri; Patel, Krunalkumar; Pollard, Nancy S.

    2015-01-01

    Reconfigurable devices have potential for great flexibility/efficiency, but mapping algorithms onto these architectures is a long-standing challenge. This paper addresses this challenge for stripe based coarse-grained reconfigurable architectures (CGRAs) by drawing on insights from graph drawing. We adapt fast, iterative algorithms from hierarchical graph drawing to the problem of mapping to stripe based architectures. We find that global sifting is 98 times as fast as simulated annealing and produces very compact designs with 17% less area on average, at a cost of 5% greater wire length. Interleaving iterations of Sugiyama and global sifting is 40 times as fast as simulated annealing and achieves somewhat more compact designs with 1.8% less area on average, at a cost of only 1% greater wire length. These solutions can enable fast design space exploration, rapid performance testing, and flexible programming of CGRAs "in the field."

  2. Uptake and distribution of 232U in peas and barley

    International Nuclear Information System (INIS)

    Schreckhise, R.G.; Cline, J.F.

    1980-01-01

    The uptake of 232 U from soil and its distribution in peas and barley were examined under conditions which isolated root uptake from deposition on aboveground plant parts. Aboveground plant parts were harvested at maturity and analyzed for 232 U content by alpha-energy-analysis. The ratio of concentration (CR) of 232 U in the dry barley seeds to dry soil was 1.6 x 10 -4 while the CR values of the stem/leaf to dry soil fraction was 3.6 x 10 -3 . The Cr values for the pea seed, stem/pod and leaf components were 5.4 x 10 -4 , 3.3 x 10 -3 and 1.7 x 10 -2 , respectively. This indicates that the CR values used in certain radiological dose-assessment models may be high by about a factor of 100 when evaluating the consumption of seeds of legumes or cereal grains by man. (author)

  3. Intermediate temperature grain boundary embrittlement in nickel-base weld metals

    Science.gov (United States)

    Nissley, Nathan Eugene

    The ductility-dip cracking (DDC) susceptibility of NiCrFe filler metals was evaluated using the strain-to-fracture (STF) GleebleRTM-based testing technique1. These high chromium Ni-base filler metals are frequently used in nuclear power plant applications for welding Ni-base Alloy 690 and included INCONELRTM Filler Metal 52 and 52M (FM-52 and FM-52M)2, and a number of FM-52M-type experimental alloys including two with additions of molybdenum and niobium. A wide range in DDC susceptibilities was observed in the tested alloys including significant variations in susceptibility with only small compositional changes. The interpretation of the STF results now includes both the threshold strain for cracking and the transition to "massive" cracking. While the threshold strain is still insightful and an indication of cracking susceptibility, materials which transition rapidly from the threshold strain to "massive" cracking are typically more susceptible to DDC. The spot pre-welds made on the STF samples, used to produce a repeatable microstructure were found to significantly affect the DDC resistance when the current downslope time was altered. Decreasing the downslope time resulted in a faster cooling rate, finer solidification substructure, fewer metastable intragranular precipitates, and a reduced DDC susceptibility. The downslope time has been found to be the most important STF testing variable evaluated to date. A significant decrease in DDC susceptibility was observed in the alloys with Mo and Nb additions. The threshold strain for cracking in the 2.5% Nb and 4% Mo NiCrFe alloy was approximately 10%, and demonstrated a DDC resistance of more than twice that observed in typical FM-82 alloys. This remarkable increase in DDC resistance was attributed to the skeletal precipitate morphology whose large surface area and dense distribution were highly effective at pinning grain boundaries and preventing crack initiation. The resulting wavy or tortuous grain boundaries act to

  4. Impact of removing straw from wheat and barley fields: A literature review

    Science.gov (United States)

    The sustainability of straw removal from wheat and barley fields from the standpoint of its effects on soil properties and nutrient cycling is a concern. A recent literature review reveals that there is no negative effect of small grain straw removal on soil organic carbon (SOC) content with irriga...

  5. Effects of partial replacement of barley with sugar beet pulp on pre ...

    African Journals Online (AJOL)

    Sixteen Zel ewes (BW = 37 ± 3.10 kg) were used in a completely randomized design to determine the effects of partial replacement of barley grain with beet pulp (BP), during late pregnancy and early lactation, on litter weight, lamb's daily gain, milk yield and milk composition. Dietary treatments were initiated approximately ...

  6. Influence of Sowing, Nitrogen Nutrition and Weather Conditions on Stand Structure and Yield of Spring Barley

    Czech Academy of Sciences Publication Activity Database

    Křen, J.; Klem, Karel; Svobodová, I.; Míša, P.; Lukas, V.

    2015-01-01

    Roč. 43, č. 2 (2015), s. 326-335 ISSN 0133-3720 R&D Projects: GA MZe QI111A133 Institutional support: RVO:67179843 Keywords : spring barley * yield formation * tillers formation and differentiation * genotype plasticity * grain quality Subject RIV: EH - Ecology, Behaviour Impact factor: 0.528, year: 2015

  7. Growth and yield of barley (Hordeum vulgare L.) as affected by ...

    African Journals Online (AJOL)

    Bheema

    Nitrogen (N) and phosphorus (P) fertilizers were applied under three water regimes to 'Sasa' barley variety using split - split plot design with three replications ..... (1999) on maize. Increasing the dosage of both fertilizers was not necessarily increase grain yield of the crop though significant increase was obtained over the ...

  8. A comparison of factors involved in starch degradation in barley germination under laboratory and malting conditions

    Science.gov (United States)

    Grains of the malting barley cultivar Legacy were laboratory germinated (LG) or micromalted (MM) and sampled daily from 0 to 5 days after imbibition/steeping. Alpha-amylase and beta-amylase activities and protein levels along with starch, osmolyte concentration (OC), and sugar (glucose, sucrose, fr...

  9. Monitoring intra- and extracellular redox capacity of intact barley aleurone layers responding to phytohormones

    DEFF Research Database (Denmark)

    Mark, Christina; Zor, Kinga; Heiskanen, Arto

    2016-01-01

    into the intact in vivo environment. An electrochemical redox assay that applies the menadione-ferricyanide double mediator is used to assess changes in the intracellular and extracellular redox environment in living aleurone layers of barley (Hordeum vulgare cv. Himalaya) grains, which respond...

  10. Adaptation of barley to harsh Mediterranean environments = Aanpassing van gerst aan ongunstige Mediterrane milieu's

    NARCIS (Netherlands)

    Oosterom, van E.

    1993-01-01


    Research Objectives

    Barley is in Syria the dominant crop in areas receiving less than 300 mm annual precipitation. Grain yield is often below 1 ton ha -1, and is reduced by low temperatures in

  11. BRS Savanna: new six-rowed malting barley cultivar for irrigated crops in the Brazilian savanna

    Directory of Open Access Journals (Sweden)

    Renato Fernando Amabile

    2013-06-01

    Full Text Available BRS Savanna, a cross between V. Morales x IF200113, is a spring andan early-maturing six-rowed barley, widely adaptedto irrigated areas of the savanna, in Central Brazil. It presents production stability and the industrial quality, grain yield and lodgingresistance are high. It is suitable for cultivation in the states of GO, MG and DF.

  12. Pirimiphos-methyl residues in stored wheat and barley, bread, burghul and parboiled wheat

    International Nuclear Information System (INIS)

    Hadjidemetriou, D.G.

    1990-01-01

    Residues of 14 C-pirimiphos-methyl in stored grain declined to 88% in wheat and 82% in barley after 12 months. Corresponding percentages with the unlabelled insecticide were 78% and 59% since only the parent chemical was determined. Surface residues, removed by washing the grain with water, decreased from 3.3 to 0.2 mg/kg for wheat and from 2.0 to 0.2 mg/kg for barley. Bound residues increased gradually with time and reached a maximum of 2.2% for wheat and 3.0% for barley in 12 months. Pirimiphos-methyl residues in flour increased from 1.1 at 0 time to 2.2 mg/kg after one year. The mean values of residues contained in the unwashed wheat grain were 81% for bran and 19% for flour. The loss in milling during preparation of wholemeal flour from prewashed grain was 7% for wheat and 6% for barley. Processed products from wheat showed residue losses ranging from 24 to 45%. (author). 16 refs, 2 figs, 2 tabs

  13. Interaction of micro and macro elements with manure on barley feed ...

    African Journals Online (AJOL)

    In order to study the effect of interaction of 'micro' and 'macro' elements on soil chemical properties, grain yield and feed yield in barley, an experiment was conducted as split plot design on randomized complete block design with three replications in the research field of Zabol University 2009. The different proportions of ...

  14. Spatial and temporal regulation of DNA fragmentation in the aleurone of germinating barley

    NARCIS (Netherlands)

    Wang, M.; Oppedijk, B.J.; Caspers, M.P.M.; Lamers, G.E.M.; Boot, M.J.; Geerlings, D.N.G.; Bakhuizen, B.; Meijer, A.H.; Duijn, B. van

    1998-01-01

    During germination of barley grains, the appearance of DNA fragmentation started in aleurone cells near the embryo and extended to the distal end in a time-dependent manner. DNA fragmentation was demonstrated to occur only after the expression of α-amylase mRNA in the aleurone layer. In addition,

  15. Yield stability in barley-wheat mixed cropping in Central Highlands of Eritrea

    NARCIS (Netherlands)

    Woldeamlak, A.; Struik, P.C.; Sharma, J.K.

    2008-01-01

    Yield data of a large set of experiments with barley and wheat were analysed in order to assess whether yield stability was greater in mixed cropping than in sole cropping, and to identify which varietal mixture showed most stable grain yields. Stable cropping system were those having reasonably

  16. The Swedish mutant barley collection

    International Nuclear Information System (INIS)

    1989-01-01

    Full text: The Swedish mutation research programme in barley began about 50 years ago and has mainly been carried out at Svaloev in co-operation with the institute of Genetics at the University of Lund. The collection has been produced from different Swedish high-yielding spring barley varieties, using the following mutagens: X-rays, neutrons, several organic chemical compounds such as ethyleneimine, several sulfonate derivatives and the inorganic chemical mutagen sodium azide. Nearly 10,000 barley mutants are stored in the Nordic Gene Bank and documented in databases developed by Udda Lundquist, Svaloev AB. The collection consists of the following nine categories with 94 different types of mutants: 1. Mutants with changes in the spike and spikelets; 2. Changes in culm length and culm composition; 3. Changes in growth types; 4. Physiological mutants; 5. Changes in awns; 6. Changes in seed size and shape; 7. Changes in leaf blades; 8. Changes in anthocyanin and colour; 9. Resistance to barley powdery mildew. Barley is one of the most thoroughly investigated crops in terms of induction of mutations and mutation genetics. So far, about half of the mutants stored at the Nordic Gene Bank, have been analysed genetically; They constitute, however, only a minority of the 94 different mutant types. The genetic analyses have given valuable insights into the mutation process but also into the genetic architecture of various characters. A number of mutants of two-row barley have been registered and commercially released. One of the earliest released, Mari, an early maturing, daylength neutral, straw stiff mutant, is still grown in Iceland. The Swedish mutation material has been used in Sweden, but also in other countries, such as Denmark, Germany, and USA, for various studies providing a better understanding of the barley genome. The collection will be immensely valuable for future molecular genetical analyses of clone mutant genes. (author)

  17. Cloning and characterization of purple acid phosphatase phytases from wheat, barley, maize, and rice

    DEFF Research Database (Denmark)

    Dionisio, G.; Madsen, C. K.; Holm, P. B.

    2011-01-01

    Barley (Hordeum vulgare) and wheat (Triticum aestivum) possess significant phytase activity in the mature grains. Maize (Zea mays) and rice (Oryza sativa) possess little or virtually no preformed phytase activity in the mature grain and depend fully on de novo synthesis during germination. Here...... development and germination. In wheat, it was demonstrated that a and b isogene expression is driven by different promoters (approximately 31% identity). TaPAPhy_a/b promoter reporter gene expression in transgenic grains and peptide mapping of TaPAPhy purified from wheat bran and germinating grains confirmed...

  18. Computer simulation of 2D grain growth using a cellular automata model based on the lowest energy principle

    International Nuclear Information System (INIS)

    He Yizhu; Ding Hanlin; Liu Liufa; Shin, Keesam

    2006-01-01

    The morphology, topology and kinetics of normal grain growth in two-dimension were studied by computer simulation using a cellular automata (Canada) model based on the lowest energy principle. The thermodynamic energy that follows Maxwell-Boltzmann statistics has been introduced into this model for the calculation of energy change. The transition that can reduce the system energy to the lowest level is chosen to occur when there is more than one possible transition direction. The simulation results show that the kinetics of normal grain growth follows the Burke equation with the growth exponent m = 2. The analysis of topology further indicates that normal grain growth can be simulated fairly well by the present CA model. The vanishing of grains with different number of sides is discussed in the simulation

  19. Genetic Engineering of Cereal Grains with Starch Consisting of More Than 99% Amylase

    DEFF Research Database (Denmark)

    Hebelstrup, Kim; Carciofi, Massimiliano; Blennow, Andreas

    2013-01-01

    that is resistant to enzymatic degradation, even when gelatinized by cooking. The barley plants producing the grains had a moderate yield loss of 25% in comparison with other barley plants of the same cultivar. We believe that the method can be applied to produce amylose-only starch in other cereal crops including......Numerous textbooks tell us that plant starches are a mix of two starch types: amylopectin and amylose. We recently succeeded in engineering a cereal crop – a barley line – producing grain starch consisting of more than 99% amylose1. This amylose-only starch contains a high residual fraction...

  20. INFLUENCE OF GRAIN DEBRIS ON THE MICRONIZATION PROCESS

    Directory of Open Access Journals (Sweden)

    D. S. Kochanov

    2014-01-01

    Full Text Available Summary. Effect of weed, mineral and metallomagnetic impurities in the grain feedstock to micronization process was investigated. In laboratory and production conditions conducted a study on the influence of the impurity content in the treated grain, different size, density and metallomagnetic properties on the process of micronization. Trash content in feed grains of barley, wheat and corn according to current standards for grain must match the basic approach, and do not exceed 5 % , including mineral impurities - 1.0%. No restrictions on metallomagnetic and organic impurities. Dependence of the clearing of mineral impurities in various capacities device for separating stones was installed. Most effectively, 95-98 % grain (especially barley where these studies were carried out allocated pebbles, i.e. mineral impurity density which is almost twice the density of barley. Lumps of earth, the density of which is virtually identical to the density of barley allocated a maximum of 70%. Setting in the shop micronization grain separator and magnetic separator device for separating stones led to increase the reliability of the process equipment and process stability micronization. Year and a half after the reconstruction of the workshop there were no failure nodes of device for flattening. A particularly important consideration is to increase the duration of exploitation of the working surfaces of the rolls crusher to guaranteed by period (not less than 1 year.

  1. What would happen to barley production in Finland if global warming exceeded 4 °C? A model-based assessment

    Czech Academy of Sciences Publication Activity Database

    Rötter, R.P.; Palosuo, T.; Pirttioja, N. K.; Dubrovský, Martin; Salo, T.; Fronzek, S.; Aikasalo, R.; Trnka, M.; Ristolainen, A.; Carter, T. R.

    2011-01-01

    Roč. 35, č. 4 (2011), s. 205-214 ISSN 1161-0301 R&D Projects: GA AV ČR IAA300420806 Institutional research plan: CEZ:AV0Z30420517 Keywords : Barley * Crop growth simulation * Climatic variability * Sensitivity analysis * Plant breeding * Weather generator Subject RIV: DG - Athmosphere Sciences, Meteorology Impact factor: 2.477, year: 2011 http://www.sciencedirect.com/science/article/pii/S1161030111000694

  2. Effect of grain defects on the mechanical behavior of nickel-based single crystal superalloy

    Energy Technology Data Exchange (ETDEWEB)

    Tang, Haibin; Guo, Haiding [Nanjing Univ. of Aeronautics and Astronautics (China). Jiangsu Province Key Lab. of Aerospace Power System

    2017-03-15

    In this paper, a single crystal (SC) partition model, consisting of primary grains and grain defects, is proposed to simulate the weakening effect of grain defects generated at geometric discontinuities of SC materials. The plastic deformation of SC superalloy is described with the modified yield criterion, associated flow rule and hardening law. Then a bicrystal model containing only one group of misoriented grains under uniaxial loading is constructed and analyzed in the commercial finite element software ABAQUS. The simulation results indicate that the yield strength and elastic modulus of misoriented grains, which are determined by the crystallographic orientation, have a significant effect on the stress distribution of the bicrystal model. A critical stress, which is calculated by the stress state at critical regions, is proposed to evaluate the local stress rise at the sub-boundary of primary and misoriented grains.

  3. Microbiota of kefir grains

    Directory of Open Access Journals (Sweden)

    Tomislav Pogačić

    2013-03-01

    Full Text Available Kefir grains represent the unique microbial community consisting of bacteria, yeasts, and sometimes filamentous moulds creating complex symbiotic community. The complexity of their physical and microbial structures is the reason that the kefir grains are still not unequivocally elucidated. Microbiota of kefir grains has been studied by many microbiological and molecular approaches. The development of metagenomics, based on the identification without cultivation, is opening new possibilities for identification of previously nonisolated and non-identified microbial species from the kefir grains. Considering recent studies, there are over 50 microbial species associated with kefir grains. The aim of this review is to summarise the microbiota composition of kefir grains. Moreover, because of technological and microbiological significance of the kefir grains, the paper provides an insight into the microbiological and molecular methods applied to study microbial biodiversity of kefir grains.

  4. DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

    Directory of Open Access Journals (Sweden)

    Stracke Silke

    2010-01-01

    genes only explained a minor part of the total genetic variation although they are known to be important factors influencing the expression of seed quality traits. Therefore, we assume that grain quality as well as plant height and flowering time are influenced by many factors each contributing a small part to the expression of the phenotype. A genome-wide association analysis could provide a more comprehensive picture of loci involved in the regulation of grain quality, thousand grain weight and the other agronomic traits that were analyzed in this study. However, despite available high-throughput genotyping arrays the marker density along the barely genome is still insufficient to cover all associations in a whole genome scan. Therefore, the candidate gene-based approach will further play an important role in barley association studies.

  5. Production of ethanol from winter barley by the EDGE (enhanced dry grind enzymatic process

    Directory of Open Access Journals (Sweden)

    Kurantz M

    2010-04-01

    Full Text Available Abstract Background US legislation requires the use of advanced biofuels to be made from non-food feedstocks. However, commercialization of lignocellulosic ethanol technology is more complex than expected and is therefore running behind schedule. This is creating a demand for non-food, but more easily converted, starch-based feedstocks other than corn that can fill the gap until the second generation technologies are commercially viable. Winter barley is such a feedstock but its mash has very high viscosity due to its high content of β-glucans. This fact, along with a lower starch content than corn, makes ethanol production at the commercial scale a real challenge. Results A new fermentation process for ethanol production from Thoroughbred, a winter barley variety with a high starch content, was developed. The new process was designated the EDGE (enhanced dry grind enzymatic process. In this process, in addition to the normal starch-converting enzymes, two accessory enzymes were used to solve the β-glucan problem. First, β-glucanases were used to hydrolyze the β-glucans to oligomeric fractions, thus significantly reducing the viscosity to allow good mixing for the distribution of the yeast and nutrients. Next, β-glucosidase was used to complete the β-glucan hydrolysis and to generate glucose, which was subsequently fermented in order to produce additional ethanol. While β-glucanases have been previously used to improve barley ethanol production by lowering viscosity, this is the first full report on the benefits of adding β-glucosidases to increase the ethanol yield. Conclusions In the EDGE process, 30% of total dry solids could be used to produce 15% v/v ethanol. Under optimum conditions an ethanol yield of 402 L/MT (dry basis or 2.17 gallons/53 lb bushel of barley with 15% moisture was achieved. The distillers dried grains with solubles (DDGS co-product had extremely low β-glucan (below 0.2% making it suitable for use in both ruminant

  6. Barley Leaf Area and Leaf Growth Rates Are Maximized during the Pre-Anthesis Phase

    Directory of Open Access Journals (Sweden)

    Ahmad M. Alqudah

    2015-04-01

    Full Text Available Leaf developmental traits are an important component of crop breeding in small-grain cereals. Surprisingly, little is known about the genetic basis for the differences in barley (Hordeum vulgare L. leaf development. The two barley row-type classes, i.e., two- and six-rowed, show clear-cut differences in leaf development. To quantify these differences and to measure the genetic component of the phenotypic variance for the leaf developmental differences in both row-type classes we investigated 32 representative spring barley accessions (14 two- and 18 six-rowed accessions under three independent growth conditions. Leaf mass area is lower in plants grown under greenhouse (GH conditions due to fewer, smaller, and lighter leaf blades per main culm compared to pot- and soil-grown field plants. Larger and heavier leaf blades of six-rowed barley correlate with higher main culm spike grain yield, spike dry weight, and harvest index; however, smaller leaf area (LA in two-rowed barley can be attributed to more spikes, tillers, and biological yield (aboveground parts. In general, leaf growth rate was significantly higher between awn primordium and tipping stages. Moderate to very high broad-sense heritabilities (0.67–0.90 were found under all growth conditions, indicating that these traits are predominantly genetically controlled. In addition, our data suggests that GH conditions are suitable for studying leaf developmental traits. Our results also demonstrated that LA impacts single plant yield and can be reconsidered in future breeding programs. Six-rowed spike 1 (Vrs1 is the major determinate of barley row-types, the differences in leaf development between two- and six-rowed barleys may be attributed to the regulation of Vrs1 in these two classes, which needs further testing.

  7. Grain Boundary Engineering for Assessing Durability and Aging Issues with Nickel-Based Superalloys, Phase II

    Data.gov (United States)

    National Aeronautics and Space Administration — The Grain Boundary Engineering (GBE) approach, successfully demonstrated in Phase I, that microstructural optimization provides a very significant improvement in...

  8. Grain Boundary Engineering for Assessing Durability and Aging Issues with Nickel-Based Superalloys Project

    Data.gov (United States)

    National Aeronautics and Space Administration — The Grain Boundary Engineering (GBE) approach, successfully demonstrated in Phase I, that microstructural optimization provides a very significant improvement in...

  9. [Features of alloplasmic wheat-barley substitution and addition lines (Hordeum marinum subsp. gussoneanum)-triticum aestivum].

    Science.gov (United States)

    Pershina, L A; Deviatkina, E P; Belova, L I; Trubacheeva, N V; Arbuzova, V S; Kravtsova, L A

    2009-10-01

    Two alloplasmic wheat-barley substitution lines were studied: a line replaced at three pairs of chromosomes 1Hmr((IB), 5Hmar(5D), and 7Hmar(7D), and the disomic-substituted line 7Hma(7D). The lines were constructed on the basis of individual plants from BCIF8- and BC2F6 progeny of barley-wheat hybrids (H. marinum subsp. gussoneanum Hudson (=H. geniculatum All.) (2n = 28) x T. aestivum L.) (2n = 42) (Pyrotrix 28), respectively. Moreover, the alloplasmic wheat-barley ditelosomic addition line 7HLma' isolated among plants from the BC1F6 progeny of a barley-wheat amphiploid was studied, which in this work corresponds to BC2F10 and BC2F11 progeny. It was ascertained that when grown in the field, these alloplasmic lines manifest stable self-fertility. Plants of the given lines are characterized by low height, shortened ears, the fewer number of stems and ears, and of spikelets in the ear, by decreased grain productivity and weight of 1000 grains, in comparison with the common wheat cultivar Pyrotrix 28. The inhibition of trait expression in alloplasmic wheat-barley substitution and addition lines may be connected not only with the influence of wild barley chromosomes functioning in the genotypic environment of common wheat, but also with the effect of the barley cytoplasm. The alloplasmic line with substitution of chromosomes 1Hmar(1B), 5Hmar(5D), and 7Hmar(7D) or the alloplasmic line 7HLmar with ditelosomic addition have, in comparison with the common wheat cultivar Pyrotrix 28, an increased grain protein content, which is explained by the effect of wild barley H. marinum subsp. gussoneanum chromosomes.

  10. Chemical weed control in barley (hordeum vulgare)

    International Nuclear Information System (INIS)

    Sarwar, M.; Hassan, S.W.; Abid, A.A.

    2008-01-01

    Effect of two different pre-emergence herbicides i.e. Terbutryn (lgron-500FW) A, 1.01.25 kg a.t. ha/sup -1/ and Flurochloridone (Racer-25 CS) a 0.31, 0.37, 0.44, 0.50 and 0.56 Kg a.i. ha/sup -1/ on weeds and yield of barley wad studied under field conditions hb/sup -1/. All the herbicides significantly reduce the dry weight of weed Maximum reduction (70%) was observed in terbutryn a 1.0 Kg a.i. ha/sup -1/ Growth and yield parameters like number of spike lets per spike. Number of grams per spike. 1000-grain weight. Biological yield. Grain yield straw yield and harvest index showed significant response to various herbicides doses under study. Application of Flurochloridone (Racer-25 (CS) a 0.44 kg a.i. ha/sup -1/ and Terbutryn (lgran-500 FW) a 1.0 kg a.i). The data further revealed that in general all herbicide application treatments exhibited superior performance in respect of growth and yield over control. (author)

  11. Rumen Microbiome Composition in Cattle during Grain-Induced Subacute Ruminal Acidosis (SARA)

    DEFF Research Database (Denmark)

    Danscher, Anne Mette; Derakshani, Hooman; Li, Shucong

    2014-01-01

    . Differences in bacterial communities between groups were tested based on weighted Unifrac distance using PERMANOVA and partial least square discriminant analysis (PLS-DA). 556,536 high quality sequences were collected, resulting in identification of 18,326 OTUs from 18 phyla of which 81 were classified...... control diet. All cows received a total mixed ration (TMR; 24% concentrate) for four weeks before the trial. SARA was induced by gradual substitution of 40% of TMR with grain pellets (50:50 wheat:barley) over 3 days. Full SARAdiet was fed for four days. Rumen samples were taken at 9 am and 9 pm on last...

  12. Alteration in Fecal Microbiota Associated with Grain-induced Subacute Ruminal Acidosis Challenge in Dairy Cows

    DEFF Research Database (Denmark)

    Danscher, Anne Mette; Derakshani, Hooman; Li, Shucong

    2014-01-01

    % concentrate) for four weeks before the trial. SARA was induced by gradual substitution of 40% of TMR with grain pellets (50:50 wheat:barley) over 3 days. Full SARA diet was fed for four days. Rumen pH was measured continuously by indwelling probes (eCow). Feces samples were taken at 9 am and 9 pm on last day......Introduction: High prevalence of subacute rumen acidosis (SARA) in dairy herds has been reported with large impact on production and welfare. The field diagnosis of SARA is currently unclear and primarily based on point measurements of rumen pH, which are inaccurate. Consequently, SARA cases...

  13. Possible application of brewer’s spent grain in biotechnology

    Directory of Open Access Journals (Sweden)

    Pejin Jelena D.

    2013-01-01

    Full Text Available Brewer’s spent grain is the major by-product in beer production. It is produced in large quantities (20 kg per 100 liters of produced beer throughout the year at a low cost or no cost, and due to its high protein and carbohydrates content it can be used as a raw material in biotechnology. Biotechnological processes based on renewable agro-industrial by-products have ecological (zero CO2 emission, eco-friendly by-products and economical (cheap raw materials and reduction of storage costs advantages. The use of brewer’s spent grain is still limited, being basically used as animal feed. Researchers are trying to improve the application of brewer’s spent grain by finding alternative uses apart from the current general use as an animal feed. Its possible applications are in human nutrition, as a raw material in biotechnology, energy production, charcoal production, paper manufacture, as a brick component, and adsorbent. In biotechnology brewer’s spent grain could be used as a substrate for cultivation of microorganisms and enzyme production, additive of yeast carrier in beer fermentation, raw material in production of lactic acid, bioethanol, biogas, phenolic acids, xylitol, and pullulan. Some possible applications for brewer’s spent grain are described in this article including pre-treatment conditions (different procedures for polysaccharides, hemicelluloses, and cellulose hydrolysis, working microorganisms, fermentation parameters and obtained yields. The chemical composition of brewer’s spent grain varies according to barley variety, harvesting time, malting and mashing conditions, and a quality and type of unmalted raw material used in beer production. Brewer’s spent grain is lignocellulosic material rich in protein and fibre, which account for approximately 20 and 70% of its composition, respectively.

  14. CLASSIFICATION OF GENUS Triticum, SENSU LATO AND SENSU STRICTO, BASED ON SPIKE AND GRAIN MORPHOLOGY

    Directory of Open Access Journals (Sweden)

    Hristo P. STOYANOV

    2015-10-01

    Full Text Available The formulation of the present classifications of species of the genus Triticum associates mainly with several plant morphological factors such as fragility of the spikes spindle, grains threshability, grain sphericity, shape and position of glumes, lemmas and paleas and awns, compactness, etc. Special attention is paid to the factor "cultural/wild" form, the ploidy and the genomic constitution of the species, often supported by molecular data which provides considerable comfort in disclosing phylogenetic features in a particular taxonomic unit. Such taxonomic determination is associated with certain disadvantages. It is not sufficiently focused on the spike morphology related to the reproductive apparatus of the plant, and also the causes of phylogenetic differentiation of certain parameters, such as spike branching, multiple spikelets, as well as the ratios of quantitative properties. The existing classifications do not give a precise answer to the taxonomic position of amphidiploids in the genus Triticum, and also for those obtained from hybrid combinations with genera Aegilops, Secale, Haynaldia, Hordeum, Elymus, Leymus, Elytrigia, Agropyron, as transitional and similar forms. Based on studies of spike and grain morphology of a large number of representatives of the genus Triticum and other interspecific and intergeneric amphidiploid forms, a classification of the genus sensu lato and sensu stricto is composed. Sensu stricto, genus Triticum covers all existing wild and cultivated known wheat forms, together with interspecific artificial synthetic forms. Sensu lato, the genus includes intergeneric hybrids, for which a specific generic epithet was coined - ×Triticum, and also a specific epithet, consistent with the originator of the amphidiploid. Special attention was paid to species and amphidiploids with the genus Aegilops. Classification sensu strictissimo was also formulated where the genus Triticum brings together only diploid species

  15. Whole grain foods and health - A Scandinavian perspective

    DEFF Research Database (Denmark)

    Frølich, Wenche; Aman, Per; Tetens, Inge

    2013-01-01

    of different whole grains and whole grain foods. The most commonly consumed whole grain cereals in the Scandinavian countries are wheat, rye, and oats with a considerable inter-country variation in the consumption patterns and with barley constituting only a minor role. The chemical composition...... and health effects of the final whole grain products. Future research should consider the specific properties of each cereal and its processing methods to further identify the uniqueness and health potentials of whole grain products. This would enable the authorities to provide more specific food...

  16. Guided search for hybrid systems based on coarse-grained space abstractions.

    Science.gov (United States)

    Bogomolov, Sergiy; Donzé, Alexandre; Frehse, Goran; Grosu, Radu; Johnson, Taylor T; Ladan, Hamed; Podelski, Andreas; Wehrle, Martin

    Hybrid systems represent an important and powerful formalism for modeling real-world applications such as embedded systems. A verification tool like SpaceEx is based on the exploration of a symbolic search space (the region space ). As a verification tool, it is typically optimized towards proving the absence of errors. In some settings, e.g., when the verification tool is employed in a feedback-directed design cycle, one would like to have the option to call a version that is optimized towards finding an error trajectory in the region space. A recent approach in this direction is based on guided search . Guided search relies on a cost function that indicates which states are promising to be explored, and preferably explores more promising states first. In this paper, we propose an abstraction-based cost function based on coarse-grained space abstractions for guiding the reachability analysis. For this purpose, a suitable abstraction technique that exploits the flexible granularity of modern reachability analysis algorithms is introduced. The new cost function is an effective extension of pattern database approaches that have been successfully applied in other areas. The approach has been implemented in the SpaceEx model checker. The evaluation shows its practical potential.

  17. WIP: A Web-based program for indexing planar features in quartz grains and its usage

    Science.gov (United States)

    Losiak, Anna; Golebiowska, Izabela; FerrièRe, Ludovic; Wojciechowski, Jacek; Huber, Matthew S.; Koeberl, Christian

    2016-04-01

    Planar deformation features (PDFs) in quartz are the most important diagnostic features that allow the unambiguous identification of impact structures on Earth. In order to confirm that these features (that are characterized by planar character and form along specific crystallographic planes) are indeed PDFs, they need to be properly investigated and indexed. Following universal-stage measurements, the process of indexing is usually performed manually, using a Wulff stereonet and following a strict procedure, which is time consuming and error prone. In this article, we present WIP, a new Web-based program for indexing planar deformation features in quartz. The correctness of our program is shown by its application to measurements that had previously been indexed manually. The observed minor differences, especially in the absolute frequency percentage of PDFs, are negligible and not significant enough to influence the estimation of shock pressure that could be calculated from the indexed results. Usability of this program is shown using the spatial relationships between a statistically significant number of 278 quartz grains with 409 sets of PDFs analyzed within the area ( 35 mm2) of a single thin section of a meta-greywacke from the Bosumtwi impact structure. Our program is not only more accurate and faster than the manual (graphical) method but also removes the human error from the plotting process and allows control of several parameters, such as the value of estimated measurement error used in the indexing calculation or method of aggregated error handling. The program also provides information about the angles between the planes of the measured PDF sets present in a grain, which allows determination of the angles between (for example) indexed {10accent="true">1¯3} and {10accent="true">1¯1} sets.

  18. A whole-grain cereal-based diet lowers postprandial plasma insulin and triglyceride levels in individuals with metabolic syndrome.

    Science.gov (United States)

    Giacco, R; Costabile, G; Della Pepa, G; Anniballi, G; Griffo, E; Mangione, A; Cipriano, P; Viscovo, D; Clemente, G; Landberg, R; Pacini, G; Rivellese, A A; Riccardi, G

    2014-08-01

    Until recently, very few intervention studies have investigated the effects of whole-grain cereals on postprandial glucose, insulin and lipid metabolism, and the existing studies have provided mixed results. The objective of this study was to evaluate the effects of a 12-week intervention with either a whole-grain-based or a refined cereal-based diet on postprandial glucose, insulin and lipid metabolism in individuals with metabolic syndrome. Sixty-one men and women age range 40-65 years, with the metabolic syndrome were recruited to participate in this study using a parallel group design. After a 4-week run-in period, participants were randomly assigned to a 12-week diet based on whole-grain products (whole-grain group) or refined cereal products (control group). Blood samples were taken at the beginning and end of the intervention, both fasting and 3 h after a lunch, to measure biochemical parameters. Generalized linear model (GLM) was used for between-group comparisons. Overall, 26 participants in the control group and 28 in the whole-grain group completed the dietary intervention. Drop-outs (five in the control and two in the whole-grain group) did not affect randomization. After 12 weeks, postprandial insulin and triglyceride responses (evaluated as average change 2 and 3 h after the meal, respectively) decreased by 29% and 43%, respectively, in the whole-grain group compared to the run-in period. Postprandial insulin and triglyceride responses were significantly lower at the end of the intervention in the whole-grain group compared to the control group (p = 0.04 and p = 0.05; respectively) whereas there was no change in postprandial response of glucose and other parameters evaluated. A twelve week whole-grain cereal-based diet, compared to refined cereals, reduced postprandial insulin and triglycerides responses. This finding may have implications for type 2 diabetes risk and cardiovascular disease. Copyright © 2014 Elsevier B.V. All rights reserved.

  19. Performance of process-based models for simulation of grain N in crop rotations across Europe

    DEFF Research Database (Denmark)

    Yin, Xiaogang; Kersebaum, KC; Kollas, C

    2017-01-01

    and rainfed treatments. Moreover, the multi-model mean provided better predictions of grain N compared to any individual model. In regard to the Individual models, DAISY, FASSET, HERMES, MONICA and STICS are suitable for predicting grain N of the main crops in typical European crop rotations, which all...

  20. Simulation of competitive grain growth upon the directional solidification of a Ni-base superalloy

    Science.gov (United States)

    Pozdniakov, A. N.; Monastyrskiy, V. P.; Ershov, M. Yu.; Monastyrskiy, A. V.

    2015-01-01

    Using the numerical simulation in the CA-FE module of the ProCAST simulation program, a systematic investigation of competitive growth of grains in a thin plate has been performed over a wide range of values of the temperature gradient and solidification rate. It has been established that the result of the simulation in the case of converging grains depends on the only parameter, i.e., the ratio of the value of the overgrowth of the grain with the preferred orientation to the size of the cell of the computational grid. Thus, the size of the cell is an important adjusting parameter of the model and must be coordinated with the parameters of the dendritic structure under given growth conditions. The grain with the preferred orientation always displaces neighboring diverging grains. The converging grains are eliminated if their deviation from the vector of the temperature gradient exceeds 20°. At the smaller angles of deviation, the result of the competitive growth depends on the size of the computational cell and varies from their joint growth (at the cell size of 5 μm) to the displacement of grains with the preferred orientation (at the cell size of 20 μm). However, all of the results of the simulation agree with the experimental data available in the literature. For the efficient selection of grains with the preferred orientation, regimes with a low temperature gradient and high growth rate are favorable.

  1. Theory of Wavelet-Based Coarse-Graining Hierarchies for Molecular Dynamics

    Science.gov (United States)

    2017-04-01

    atomistic to the mesoscale and back: coarse graining an azobenzene liquid crystal. Soft Matter. 2008;4:859-869. 25. Ismail AE, Rutledge GC, Stephanopoulos G...Ismail AE, Stephanopoulos G, Rutledge GC. Topological coarse graining of polymer chains using wavelet-accelerated Monte Carlo. II. Self-avoiding chains. J

  2. Presence of deoxynivalenol in small-grain samples from 2009/10 harvest season

    Directory of Open Access Journals (Sweden)

    Jajić Igor M.

    2011-01-01

    Full Text Available Fusarium head blight (FHB is present in all growing regions of small grains and causes significant losses in yield and grain quality. In our environmental conditions, dominant species is Fusarium graminearum Group 2. During 2009/10 there was a significant Fusarium infestation on wheat, barley and triticale. The aim of this study was to examine the contents of deoxynivalenol (DON in cereal samples taken after 2009/10 harvest season. We analyzed 22 NS varieties of small grains from Rimski Šančevi, including 16 varieties of winter wheat, one facultative wheat variety, four varieties of winter barley and one variety of triticale. Analytical methods based on clean-up by solid-phase extraction (SPE columns and detection by liquid chromatography were used. Fifteen out the 22 analyzed samples were positive for the presence of DON at a mean level of 0.537 mg/kg. The highest concentration was 1.952 mg/kg. These findings were in correlation with percentage of the Fusarium damaged kernels.

  3. Starch Bioengineering in Barley

    DEFF Research Database (Denmark)

    Shaik, Shahnoor Sultana

    of modified starches (in comparison to wild-type) during grain germination, development and on its pathogen resistance during Fusarium Head blight (FHB). The targets were the phosphate content, which has potential industrial applications and amylose content having valuable food and feed applications...... starch deposition in these lines in combination with suppressed hydrolase activities led to temporal and compensating redirection of starch, sugar and protein metabolism in order to maintain the metabolic dynamics during germination. Further investigations on grain development revealed the differences...... of these modified starches and the modifications on germination and it was observed that HP did not show higher starch mobilization or degradation (despite of lower hydrolase activities), while AO showed significantly lower starch mobilization compared to wild-type (WT). This study oncluded that the inadequate...

  4. METHODS OF ANALYSIS AND CLASSIFICATION OF THE COMPONENTS OF GRAIN MIXTURES BASED ON MEASURING THE REFLECTION AND TRANSMISSION SPECTRA

    Directory of Open Access Journals (Sweden)

    Artem O. Donskikh*

    2017-10-01

    Full Text Available The paper considers methods of classification of grain mixture components based on spectral analysis in visible and near-infrared wavelength ranges using various measurement approaches - reflection, transmission and combined spectrum methods. It also describes the experimental measuring units used and suggests the prototype of a multispectral grain mixture analyzer. The results of the spectral measurement were processed using neural network based classification algorithms. The probabilities of incorrect recognition for various numbers of spectral parts and combinations of spectral methods were estimated. The paper demonstrates that combined usage of two spectral analysis methods leads to higher classification accuracy and allows for reducing the number of the analyzed spectral parts. A detailed description of the proposed measurement device for high-performance real-time multispectral analysis of the components of grain mixtures is given.

  5. Genome-wide association study of production and stability traits in barley cultivated under future climate scenarios

    DEFF Research Database (Denmark)

    Ingvordsen, Cathrine Heinz; Backes, Gunter; Lyngkjær, Michael Foged

    2015-01-01

    Future barley cultivars will have to produce under the constraints of higher temperature in combination with increased concentrations of atmospheric carbon dioxide and ozone as a consequence of climate change. A diverse set of 167 spring barley genotypes was cultivated under elevated levels...... to identify markers for increased primary production under climate change conditions and reveal possible genes of interest. Phenotyped traits included grain yield, number of grains, number of ears per plant, aboveground vegetative biomass, harvest index and stability of the production parameters over the five...

  6. Some quality attributes of low fat ice cream substituted with hulless barley flour and barley ß-glucan

    OpenAIRE

    Abdel-Haleem, Amal M. H.; Awad, R. A.

    2015-01-01

    The purpose of this paper is to investigate some quality attributes of low fat ice cream (LFIC) substituted with hulless barley flour (HBF) and barley ß-glucan (BBG). The methodology included in this paper is based on adding HBF (1, 2, 3 and 4 %) as a partial substitution of skim milk powder (SMP) and BBG (0.40 %) as a complete substitution of carboxy methyl cellulose (CMC). All mixes and resultant ice cream samples were evaluated for their physicochemical properties as well as the sensory qu...

  7. The effects of GA and ABA treatments on metabolite profile of germinating barley.

    Science.gov (United States)

    Huang, Yuqing; Cai, Shengguan; Ye, Lingzhen; Hu, Hongliang; Li, Chengdao; Zhang, Guoping

    2016-02-01

    Sugar degradation during grain germination is important for malt quality. In malting industry, gibberellin (GA) is frequently used for improvement of malting quality. In this study, the changes of metabolite profiles and starch-degrading enzymes during grain germination, and as affected by GA and abscisic acid (ABA) were investigated using two wild barley accessions XZ72 and XZ95. Totally fifty-two metabolites with known structures were detected and the change of metabolite during germination was time- and genotype dependent. Sugars and amino acids were the most dramatically changed compounds. Addition of GA enhanced the activities of starch-degrading enzymes, and increased most metabolites, especially sugars and amino acids, whereas ABA had the opposite effect. The effect varied with the barley accessions. The current study is the first attempt in investigating the effect of hormones on metabolite profiles in germinating barley grain, being helpful for identifying the factors affecting barley germination or malt quality. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Objectives and results of barley breeding in Australia

    International Nuclear Information System (INIS)

    Sparrow, D.H.B.

    1990-01-01

    An important current development in Australian barley improvement is the release of semi-dwarf cultivars. These are derived from Abed Deba, Triumph or Aapo which are believed to have an allelic series of mutant genes. A common problem with these genes is their association with relatively late maturity and small grain, limiting current cultivars to rainfall areas above 450mm per annum. The first release 'Skiff' (S.A., N.S.W. 1988) is to be followed by selections from 'Forrest' x 'Aapo' in Western Australia and 'Grimmett' x 'Triumph' in Queensland, whilst 'Triumph' is already being grown in Tasmania. (author)

  9. Quantitative characterization and comparison of precipitate and grain shape in Nickel -base superalloys using moment invariants

    Science.gov (United States)

    Callahan, Patrick Gregory

    A fundamental objective of materials science and engineering is to understand the structure-property-processing-performance relationship. We need to know the true 3-D microstructure of a material to understand certain geometric properties of a material, and thus fulfill this objective. Focused ion beam (FIB) serial sectioning allows us to find the true 3-D microstructure of Ni-base superalloys. Once the true 3-D microstructure is obtained, an accurate quantitative description and characterization of precipitate and/or grain shapes is needed to understand the microstructure and describe it in an unbiased way. In this thesis, second order moment invariants, the shape quotient Q, a convexity measure relating the volume of an object to the volume of its convex hull, V/Vconv, and Gaussian curvature have been used to compare an experimentally observed polycrystalline IN100 microstructure to three synthetic microstructures. The three synthetic microstructures used different shape classes to produce starting grain shapes. The three shape classes are ellipsoids, superellipsoids, and the shapes generated when truncating a cube with an octahedron. The microstructures are compared using a distance measure, the Hellinger distance. The Hellinger distance is used to compare distributions of shape descriptors for the grains in each microstructure. The synthetic microstructure that has the smallest Hellinger distance, and so best matched the experimentally observed microstructure is the microstructure that used superellipsoids as a starting grain shape. While it has the smallest Hellinger distance, and is approaching realistic grain morphologies, the superellipsoidal microstructure is still not realistic. Second order moment invariants, Q, and V/V conv have also been used to characterize the γ' precipitate shapes from four experimental Ru-containing Ni-base superalloys with differences in alloying additions. The superalloys are designated UM-F9, UM-F18, UM-F19, and UM-F22. The

  10. Effect of Grain Boundaries on the Performance of Thin-Film-Based Polycrystalline Silicon Solar Cells: A Numerical Modeling

    Science.gov (United States)

    Chhetri, Nikita; Chatterjee, Somenath

    2018-01-01

    Solar cells/photovoltaic, a renewable energy source, is appraised to be the most effective alternative to the conventional electrical energy generator. A cost-effective alternative of crystalline wafer-based solar cell is thin-film polycrystalline-based solar cell. This paper reports the numerical analysis of dependency of the solar cell parameters (i.e., efficiency, fill factor, open-circuit voltage and short-circuit current density) on grain size for thin-film-based polycrystalline silicon (Si) solar cells. A minority carrier lifetime model is proposed to do a correlation between the grains, grain boundaries and lifetime for thin-film-based polycrystalline Si solar cells in MATLAB environment. As observed, the increment in the grain size diameter results in increase in minority carrier lifetime in polycrystalline Si thin film. A non-equivalent series resistance double-diode model is used to find the dark as well as light (AM1.5) current-voltage (I-V) characteristics for thin-film-based polycrystalline Si solar cells. To optimize the effectiveness of the proposed model, a successive approximation method is used and the corresponding fitting parameters are obtained. The model is validated with the experimentally obtained results reported elsewhere. The experimentally reported solar cell parameters can be found using the proposed model described here.

  11. The recrystallized grain size piezometer for quartz: An EBSD-based calibration

    Science.gov (United States)

    Cross, A. J.; Prior, D. J.; Stipp, M.; Kidder, S.

    2017-07-01

    We have reanalyzed samples previously used for a quartz recrystallized grain size paleopiezometer, using electron backscatter diffraction (EBSD). Recrystallized and relict grains are separated using their grain orientation spread, which acts as a measure of intragranular lattice distortion and a proxy for dislocation density. For EBSD maps made with a 1 μm step size, the piezometer relationship is D = 103.91 ± 0.41 • σ-1.41 ± 0.21 (for root-mean-square mean diameter values). We also present a "sliding resolution" piezometer relationship, D = 104.22 ± 0.51 • σ-1.59 ± 0.26, that combines 1 μm step size data at coarser grain sizes with 200 nm step size data at finer grain sizes. The sliding resolution piezometer more accurately estimates stress in fine-grained (<10 μm) samples. The two calibrations give results within 10% of each other for recrystallized grain sizes between 10 μm and 100 μm. Both piezometers match the original light optical microscopy quartz piezometer within error.

  12. Screening of the aerodynamic and biophysical properties of barley malt

    Science.gov (United States)

    Ghodsvali, Alireza; Farzaneh, Vahid; Bakhshabadi, Hamid; Zare, Zahra; Karami, Zahra; Mokhtarian, Mohsen; Carvalho, Isabel. S.

    2016-10-01

    An understanding of the aerodynamic and biophysical properties of barley malt is necessary for the appropriate design of equipment for the handling, shipping, dehydration, grading, sorting and warehousing of this strategic crop. Malting is a complex biotechnological process that includes steeping; germination and finally, the dehydration of cereal grains under controlled temperature and humidity conditions. In this investigation, the biophysical properties of barley malt were predicted using two models of artificial neural networks as well as response surface methodology. Stepping time and germination time were selected as the independent variables and 1 000 kernel weight, kernel density and terminal velocity were selected as the dependent variables (responses). The obtained outcomes showed that the artificial neural network model, with a logarithmic sigmoid activation function, presents more precise results than the response surface model in the prediction of the aerodynamic and biophysical properties of produced barley malt. This model presented the best result with 8 nodes in the hidden layer and significant correlation coefficient values of 0.783, 0.767 and 0.991 were obtained for responses one thousand kernel weight, kernel density, and terminal velocity, respectively. The outcomes indicated that this novel technique could be successfully applied in quantitative and qualitative monitoring within the malting process.

  13. The effect of interspecies interactions and water deficit on spring barley and red clover biomass accumulation at successive growth stages

    Directory of Open Access Journals (Sweden)

    Magdalena Jastrzębska

    2016-12-01

    Full Text Available A pot experiment was conducted in a greenhouse in Olsztyn, Poland, in the period 2010–2012. The aim of the study was to examine whether soil water deficit would change biomass volume and distribution of pure sown spring barley and red clover as well as growth rate during their joint vegetation and mutual interactions. The interactions between spring barley and red clover were of a competitive character, and the cereal was the stronger crop. The strength of this competition increased in time with the growing season. Through most of the growing season, the competition was poorer in water deficit conditions. The impact of clover on barley before the heading stage showed facilitation symptoms. Interspecific competition reduced the rate of barley biomass accumulation and decreased stem and leaf biomass towards the end of the growing season. Intensified translocation of assimilates from the vegetative parts to grain minimized the decrease in spike biomass. Water deficit stress had a more inhibitory effect on the biomass and growth rate of barley than competition, and competition did not exacerbate the adverse influence of water deficit stress on barley. Competition from barley significantly reduced the biomass and biomass accumulation rate of clover. Water deficit stress did not exacerbate barley’s competitive effect on clover, but it strongly inhibited the growth of aboveground biomass in pure-sown clover.

  14. Fast AdaBoost-Based Face Detection System on a Dynamically Coarse Grain Reconfigurable Architecture

    Science.gov (United States)

    Xiao, Jian; Zhang, Jinguo; Zhu, Min; Yang, Jun; Shi, Longxing

    An AdaBoost-based face detection system is proposed, on a Coarse Grain Reconfigurable Architecture (CGRA) named “REMUS-II”. Our work is quite distinguished from previous ones in three aspects. First, a new hardware-software partition method is proposed and the whole face detection system is divided into several parallel tasks implemented on two Reconfigurable Processing Units (RPU) and one micro Processors Unit (µPU) according to their relationships. These tasks communicate with each other by a mailbox mechanism. Second, a strong classifier is treated as a smallest phase of the detection system, and every phase needs to be executed by these tasks in order. A phase of Haar classifier is dynamically mapped onto a Reconfigurable Cell Array (RCA) only when needed, and it's quite different from traditional Field Programmable Gate Array (FPGA) methods in which all the classifiers are fabricated statically. Third, optimized data and configuration word pre-fetch mechanisms are employed to improve the whole system performance. Implementation results show that our approach under 200MHz clock rate can process up-to 17 frames per second on VGA size images, and the detection rate is over 95%. Our system consumes 194mW, and the die size of fabricated chip is 23mm2 using TSMC 65nm standard cell based technology. To the best of our knowledge, this work is the first implementation of the cascade Haar classifier algorithm on a dynamically CGRA platform presented in the literature.

  15. Genetic diversity of some Saudi barley (Hordeum Vulgare L ...

    African Journals Online (AJOL)

    enoh

    2012-03-13

    Mar 13, 2012 ... Full Length Research Paper. Genetic diversity of some Saudi barley (Hordeum. Vulgare L.) landraces based on microsatellite markers. El-Awady A. M. Mohamed 1,2 and El-Tarras A. E. Adel1,2. 1Biotechnology and Genetic Engineering Research Unit, Scientific Research Center, College of Medicine, Taif.

  16. Androgenic switch in barley microspores

    NARCIS (Netherlands)

    de Faria Maraschin, Simone

    2005-01-01

    Barley androgenesis represents an attractive system to study stress-induced cell differentiation and is a valuable tool for efficient plant breeding. The switch from the pollen developmental pathway towards an androgenic route involves several well-described morphological changes. However, little is

  17. Giant grains

    International Nuclear Information System (INIS)

    Leitch-Devlin, M.A.; Millar, T.J.; Williams, D.A.

    1976-01-01

    Infrared observations of the Orion nebula have been interpreted by Rowan-Robinson (1975) to imply the existence of 'giant' grains, radius approximately 10 -2 cm, throughout a volume about a parsec in diameter. Although Rowan-Robinson's model of the nebula has been criticized and the presence of such grains in Orion is disputed, the proposition is accepted, that they exist, and in this paper situations in which giant grains could arise are examined. It is found that, while a giant-grain component to the interstellar grain density may exist, it is difficult to understand how giant grains arise to the extent apparently required by the Orion nebula model. (Auth.)

  18. Whole grain consumption and risk of colorectal cancer: a population-based cohort of 60?000 women

    OpenAIRE

    Larsson, S C; Giovannucci, E; Bergkvist, L; Wolk, A

    2005-01-01

    We examined prospectively the association between whole grain consumption and colorectal cancer risk in the population-based Swedish Mammography Cohort. A total of 61?433 women completed a food-frequency questionnaire at baseline (1987?1990) and, through linkage with the Swedish Cancer Registry, 805 incident cases of colorectal cancer were identified during a mean follow-up of 14.8 years. High consumption of whole grains was associated with a lower risk of colon cancer, but not of rectal canc...

  19. RFID Based Grain and Oil Products Traceability and Its Computer Implementation

    OpenAIRE

    Hu, Haiyan; Cui, Yunpeng

    2009-01-01

    International audience; Food safety is a widely concerned problem in current world. Traceability technology is an effective measure to solve the problem. This paper describes the study of the traceability of grain and oil products. Include the study contents, and a system we developed for traceability of grain and oil products, and the demonstration of the study. The system we developed was used in Luhua group and some supermarkets and get good feedbacks.

  20. A model for grain growth based on the novel description of dendrite shape

    OpenAIRE

    O. Wodo; N. Sczygiol

    2007-01-01

    We use novel description of dendritic shape in the micro solid phase growth model. The model describes evolution of both primary solid solution dendrite and eutectic that forms between arms and grains in the last stage of solidification. Obtained results show that our approach can be used in grain growth model to determine more reliable eutectic distribution. In the paper no kinetics connected with the eutectic transformation is taken into account. However, this does not affect the eutectic d...

  1. A Case Study for Grain Quality Assurance Tracking based on a Blockchain Business Network

    OpenAIRE

    Lucena, Percival; Binotto, Alecio P. D.; Momo, Fernanda da Silva; Kim, Henry

    2018-01-01

    One of the key processes in Agriculture is quality measurement throughout the transportation of grains along its complex supply chain. This procedure is suitable for failures, such as delays to final destinations, poor monitoring, and frauds. To address the grain quality measurement challenge through the transportation chain, novel technologies, such as Distributed Ledger and Blockchain, can bring more efficiency and resilience to the process. Particularly, Blockchain is a new type of distrib...

  2. RFID Based Grain and Oil Products Traceability and Its Computer Implementation

    Science.gov (United States)

    Hu, Haiyan; Cui, Yunpeng

    Food safety is a widely concerned problem in current world. Traceability technology is an effective measure to solve the problem. This paper describes the study of the traceability of grain and oil products. Include the study contents, and a system we developed for traceability of grain and oil products, and the demonstration of the study. The system we developed was used in Luhua group and some supermarkets and get good feedbacks.

  3. Economical Evaluation of Single Irrigation Efficient of Rainfed Barley under Different Agronimic Managements at On-farm Areas

    Directory of Open Access Journals (Sweden)

    Ali Reza Tavakoli

    2016-02-01

    income, C (w : Cost of production, YG: Crop yield (kg/ ha, PG : Price of crop(Rials/kg, YS: straw yield (kg/ ha PS : Price of straw (Rials/kg, C1: Total fixed cost without cost of water and irrigation (Rials/ ha, Pw: Price of water and irrigation (Rials/ m3 and W: Amount of water and irrigation (m3/ ha. Changes of incomes and changes of costs for every treatment in different crop managements were used as follows: (2 (3 Where j and j+1 show existence and substitution crop managements. In order to determine the price of irrigation water, total cost including pump and electromotor, semi deep well, power instrument, maps, pipe transport and implementation network, other primary cost and operation cost were used. The analysis period for the instruments (pump and electromotor, maps, implementation network was 20 years and for the semi deep well was 30 years. In this study, total cost was referred to the present value with %15 discount rate by uniform series formulas. Then, the water was used in the farm. The price of water was determined. Capital recovery formula is as follows: (4 Where: A: Annual value of primary investment costs, P: Primary investment costs for irrigation system, i: Discount rate and n: analysis period. Results and Discussion: According to the results, the price of water and irrigation at the research region based on its components and under 15% and 25% interest rates were obtained to be 213 and 338.1 Rials per cubic meters, respectively. The barley grain yield and its net benefit under advanced management were more than that obtained under traditional management. In traditional management, the mean barley grain yield for treatments including rainfed, Single irrigation (SI - planting and SI spring were estimated to be 1572, 2487 and 2670 kgha-1, respectively. The mean profit for rainfed barley production for treatments including rainfed, SI-planting and SI spring were estimated to be 1270.2, 2314.2 and 2607 (Thousand Rial.ha-1, respectively. In advanced

  4. Characterization of pomegranate juice and whey based novel beverage fermented by kefir grains.

    Science.gov (United States)

    Sabokbar, Nayereh; Khodaiyan, Faramarz

    2015-06-01

    Mixture of pomegranate juice and whey was evaluated as a potential substrate for production of a novel probiotic beverage by kefir grains. Different fermentation conditions were used as viz: two fermentation temperature (19 ºC and 25 ºC) and two levels of kefir grains inoculum (5 % and 8%w/v). pH, acidity, lactose consumption as well as organic acids formation were determined during 32 hours of fermentation. Results showed that kefir grains were able to utilize lactose and decrease pH, increase acidity, produce lactic acid and acetic acid, while the level of citric acid decreased. It was observed these change depended on temperature and level of kefir grains with the highest changes at the temperature of 25 ºC and kefir grains inoculum of 8%w/v. Pomegranate juice and whey mixture therefore may serve as a suitable substrate for the production of novel probiotic dairy-fruit juice beverage by kefir grains and the sensory characteristics of this beverage were shown desirable results.

  5. Development of shrinkage and fracture parameters in selected fine-grained cement-based composites

    Directory of Open Access Journals (Sweden)

    Kucharczyková Barbara

    2017-01-01

    Full Text Available The paper summarizes results of a pilot study aimed at the evaluation of an experimental investigation focused on determination of the material characteristics development of selected fine-grained cement-based composites during their ageing. The composition of composites being investigated differed only in a water to cement (w/c ratio and in amount of superplasticizer. Quite extensive experiments were performed with the aim to determine shrinkage, dynamic a static modulus of elasticity and fracture properties on test specimens exposed to free drying during the whole time of its ageing (including the early stage of setting and hardening. The article presents especially results (including their statistical evaluation of shrinkage and fracture parameters development within 90 days of composites’ ageing. Experimental results show the dependence of the investigated characteristics on the value of w/c ratio. The most visible effect was observed in the case of shrinkage development. The curing conditions were reflected especially in high variability of the test results.

  6. SmartCell: An Energy Efficient Coarse-Grained Reconfigurable Architecture for Stream-Based Applications

    Directory of Open Access Journals (Sweden)

    Liang Cao

    2009-01-01

    Full Text Available This paper presents SmartCell, a novel coarse-grained reconfigurable architecture, which tiles a large number of processor elements with reconfigurable interconnection fabrics on a single chip. SmartCell is able to provide high performance and energy efficient processing for stream-based applications. It can be configured to operate in various modes, such as SIMD, MIMD, and systolic array. This paper describes the SmartCell architecture design, including processing element, reconfigurable interconnection fabrics, instruction and control process, and configuration scheme. The SmartCell prototype with 64 PEs is implemented using 0.13  m CMOS standard cell technology. The core area is about 8.5  , and the power consumption is about 1.6 mW/MHz. The performance is evaluated through a set of benchmark applications, and then compared with FPGA, ASIC, and two well-known reconfigurable architectures including RaPiD and Montium. The results show that the SmartCell can bridge the performance and flexibility gap between ASIC and FPGA. It is also about 8% and 69% more energy efficient than Montium and RaPiD systems for evaluated benchmarks. Meanwhile, SmartCell can achieve 4 and 2 times more throughput gains when comparing with Montium and RaPiD, respectively. It is concluded that SmartCell system is a promising reconfigurable and energy efficient architecture for stream processing.

  7. Multiscale crystal defect dynamics: A coarse-grained lattice defect model based on crystal microstructure

    Science.gov (United States)

    Lyu, Dandan; Li, Shaofan

    2017-10-01

    Crystal defects have microstructure, and this microstructure should be related to the microstructure of the original crystal. Hence each type of crystals may have similar defects due to the same failure mechanism originated from the same microstructure, if they are under the same loading conditions. In this work, we propose a multiscale crystal defect dynamics (MCDD) model that models defects by considering its intrinsic microstructure derived from the microstructure or material genome of the original perfect crystal. The main novelties of present work are: (1) the discrete exterior calculus and algebraic topology theory are used to construct a scale-up (coarse-grained) dual lattice model for crystal defects, which may represent all possible defect modes inside a crystal; (2) a higher order Cauchy-Born rule (up to the fourth order) is adopted to construct atomistic-informed constitutive relations for various defect process zones, and (3) an hierarchical strain gradient theory based finite element formulation is developed to support an hierarchical multiscale cohesive (process) zone model for various defects in a unified formulation. The efficiency of MCDD computational algorithm allows us to simulate dynamic defect evolution at large scale while taking into account atomistic interaction. The MCDD model has been validated by comparing of the results of MCDD simulations with that of molecular dynamics (MD) in the cases of nanoindentation and uniaxial tension. Numerical simulations have shown that MCDD model can predict dislocation nucleation induced instability and inelastic deformation, and thus it may provide an alternative solution to study crystal plasticity.

  8. Fine-grained parallelism accelerating for RNA secondary structure prediction with pseudoknots based on FPGA.

    Science.gov (United States)

    Xia, Fei; Jin, Guoqing

    2014-06-01

    PKNOTS is a most famous benchmark program and has been widely used to predict RNA secondary structure including pseudoknots. It adopts the standard four-dimensional (4D) dynamic programming (DP) method and is the basis of many variants and improved algorithms. Unfortunately, the O(N(6)) computing requirements and complicated data dependency greatly limits the usefulness of PKNOTS package with the explosion in gene database size. In this paper, we present a fine-grained parallel PKNOTS package and prototype system for accelerating RNA folding application based on FPGA chip. We adopted a series of storage optimization strategies to resolve the "Memory Wall" problem. We aggressively exploit parallel computing strategies to improve computational efficiency. We also propose several methods that collectively reduce the storage requirements for FPGA on-chip memory. To the best of our knowledge, our design is the first FPGA implementation for accelerating 4D DP problem for RNA folding application including pseudoknots. The experimental results show a factor of more than 50x average speedup over the PKNOTS-1.08 software running on a PC platform with Intel Core2 Q9400 Quad CPU for input RNA sequences. However, the power consumption of our FPGA accelerator is only about 50% of the general-purpose micro-processors.

  9. SmartCell: An Energy Efficient Coarse-Grained Reconfigurable Architecture for Stream-Based Applications

    Directory of Open Access Journals (Sweden)

    Cao Liang

    2009-01-01

    Full Text Available This paper presents SmartCell, a novel coarse-grained reconfigurable architecture, which tiles a large number of processor elements with reconfigurable interconnection fabrics on a single chip. SmartCell is able to provide high performance and energy efficient processing for stream-based applications. It can be configured to operate in various modes, such as SIMD, MIMD, and systolic array. This paper describes the SmartCell architecture design, including processing element, reconfigurable interconnection fabrics, instruction and control process, and configuration scheme. The SmartCell prototype with 64 PEs is implemented using 0.13 μm CMOS standard cell technology. The core area is about 8.5 mm2, and the power consumption is about 1.6 mW/MHz. The performance is evaluated through a set of benchmark applications, and then compared with FPGA, ASIC, and two well-known reconfigurable architectures including RaPiD and Montium. The results show that the SmartCell can bridge the performance and flexibility gap between ASIC and FPGA. It is also about 8% and 69% more energy efficient than Montium and RaPiD systems for evaluated benchmarks. Meanwhile, SmartCell can achieve 4 and 2 times more throughput gains when comparing with Montium and RaPiD, respectively. It is concluded that SmartCell system is a promising reconfigurable and energy efficient architecture for stream processing.

  10. Effect of the New Plant Growth Biostimulants Based on Amino Acids on Yield and Grain Quality of Winter Wheat.

    Science.gov (United States)

    Popko, Małgorzata; Michalak, Izabela; Wilk, Radosław; Gramza, Mateusz; Chojnacka, Katarzyna; Górecki, Henryk

    2018-02-21

    Field and laboratory experiments were carried out in 2012-2013, aimed at evaluating the influence of new products stimulating plant growth based on amino acids on crop yield, characteristics of grain and content of macro- and micronutrients in winter wheat ( Triticum aestivum L.). The tests included two formulations produced in cooperation with INTERMAG Co. (Olkusz, Poland)-AminoPrim and AminoHort, containing 15% and 20% amino acids, respectively, and 0.27% and 2.1% microelements, respectively. Field experiments showed that the application of products based on amino acids influenced the increase of grain yield of winter wheat (5.4% and 11%, respectively, for the application of AminoPrim at a dose 1.0 L/ha and AminoHort at dose 1.25 L/ha) when compared to the control group without biostimulant. Laboratory tests showed an increase of technological characteristics of grain such as ash content, Zeleny sedimentation index and content of protein. The use of the tested preparations at different doses also contributed to the increase of the nutrients content in grains, in particular copper (ranging 31-50%), as well as sodium (35-43%), calcium (4.3-7.9%) and molybdenum (3.9-16%). Biostimulants based on amino acids, tested in the present study, can be recommended for an efficient agricultural production.

  11. (QTLs) for γ- aminobutyric acid content in grain of barley

    African Journals Online (AJOL)

    Yomi

    2012-01-24

    Jan 24, 2012 ... by glutamate decarboxylase, a calcium/calmodulin- dependent enzyme, and acts as a major inhibitory neurotransmitter in the central nervous system (Krnjevic,. 1974; Mazzucotelli et al., 2006). Cold acclimation causes a significant increase in amino acid pools and induces the expression of the GABA-shunt ...

  12. Effect of cultivar and formaldehyde treatment of barley grain on ...

    African Journals Online (AJOL)

    ... but increased the time (h) to produce 50% of A and reduced the time (h) to produce 95% of A. The reduction in gas production ranged from 33.3 to 51 mL/g OM with 6 h incubation showing the highest decrease in gas production. It is concluded that formaldehyde treatment may provide an opportunity to manipulate the site ...

  13. Effect of TM on lodging resistance and yield components of barley

    International Nuclear Information System (INIS)

    Wang Bingkui; Jin Ziyu; Zhao Miaozhen

    1995-01-01

    120 ppm TM treatment on barley at the tiller stage had effects of enhancing tiller of seedling, controlling the elongation growth of plant at joining and booting stages and reducing the inter-node length of the basal stem and 2nd from the basal stem, thereby increased the ability of lodging resistance. In addition, TM increased the number of grains, reduced the number of blighted grains with no 1000 grains weight decrease. The results from the test of 14 C-glucose trace showed that TM enhanced the intensity of milky at the milky stage

  14. Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison

    DEFF Research Database (Denmark)

    Li, Chengdao; Ni, Peixiang; Francki, Michael

    2004-01-01

    Pre-harvest sprouting results in significant economic loss for the grain industry around the world. Lack of adequate seed dormancy is the major reason for pre-harvest sprouting in the field under wet weather conditions. Although this trait is governed by multiple genes it is also highly heritable....... A major QTL controlling both pre-harvest sprouting and seed dormancy has been identified on the long arm of barley chromosome 5H, and it explains over 70% of the phenotypic variation. Comparative genomics approaches among barley, wheat and rice were used to identify candidate gene(s) controlling seed...... dormancy and hence one aspect of pre-harvest sprouting. The barley seed dormancy/pre-harvest sprouting QTL was located in a region that showed good synteny with the terminal end of the long arm of rice chromosome 3. The rice DNA sequences were annotated and a gene encoding GA20-oxidase was identified...

  15. Predicting grain yield in rice using multi-temporal vegetation indices from UAV-based multispectral and digital imagery

    Science.gov (United States)

    Zhou, X.; Zheng, H. B.; Xu, X. Q.; He, J. Y.; Ge, X. K.; Yao, X.; Cheng, T.; Zhu, Y.; Cao, W. X.; Tian, Y. C.

    2017-08-01

    Timely and non-destructive assessment of crop yield is an essential part of agricultural remote sensing (RS). The development of unmanned aerial vehicles (UAVs) has provided a novel approach for RS, and makes it possible to acquire high spatio-temporal resolution imagery on a regional scale. In this study, the rice grain yield was predicted with single stage vegetation indices (VIs) and multi-temporal VIs derived from the multispectral (MS) and digital images. The results showed that the booting stage was identified as the optimal stage for grain yield prediction with VIs at a single stage for both digital image and MS image. And corresponding optimal color index was VARI with R2 value of 0.71 (Log relationship). While the optimal vegetation index NDVI[800,720] based on MS images showed a linear relationship with the grain yield and gained a higher R2 value (0.75) than color index did. The multi-temporal VIs showed a higher correlation with grain yield than the single stage VIs did. And the VIs at two random growth stage with the multiple linear regression function [MLR(VI)] performed best. The highest correlation coefficient were 0.76 with MLR(NDVI[800,720]) at the booting and heading stages (for the MS image) and 0.73 with MLR(VARI) at the jointing and booting stages (for the digital image). In addition, the VIs that showed a high correlation with LAI performed well for yield prediction, and the VIs composed of red edge band (720 nm) and near infrared band (800 nm) were found to be more effective in predicting yield and LAI at high level. In conclusion, this study has demonstrated that both MS and digital sensors mounted on the UAV are reliable platforms for rice growth and grain yield estimation, and determined the best period and optimal VIs for rice grain yield prediction.

  16. Evaluation of barley (Hordeum vulgare L. and faba bean (Vicia faba L. yield in different density and mixture intercropping via competition indices

    Directory of Open Access Journals (Sweden)

    F Eslami Khalili

    2016-05-01

    Full Text Available In order to study the intercropping of barley (Hordeum vulgare L. and faba bean (Vicia faba L. an experiment was conducted as factorial based on randomized complete block design with two factors and three replications at Sari Agricultural Science and Natural Resources University during 2009. The first factor was two seed ratios include D1: 75 and 150 kg.ha-1 of faba bean and barley, respectively (optimum seed ratio and D2: 100 and 200 kg.ha-1 of faba bean and barley, respectively (high seed ratio and the second factor consisted of different planting ratio, P1: sole cropping of faba bean, P2: 50% faba bean + 50 % barley, P3: 75% faba bean + 25% barley, P4: 25% faba bean + 75% barley, P5: sole cropping of barley. Land equivalent ratio (LER indicated that intercropping of 25% faba bean + 75% barley was better than 50% faba bean + 50% barley. According to significant interaction effects of density and intercropping ratio in terms of seed yield and some competitive indices for both crop species, the highest barley and faba bean yield (3306.66 and 4884.56 kg.ha-1, respectively were observed in sole cropping with high density. In this experiment, the 75 % faba bean + 25 % mixture with high density was recorded highest intercropping yield, barley aggressivity value and 27% yield increases of barley in mix-proportion compared to sole crops. Also, the most of faba bean aggressivity value and faba bean yield increases in mix-proportion compared to sole crop were obtained when 25% faba bean + 75% barley mixture with optimum density was used. Furthermore the 75% faba bean + 25% barley treatment plus optimum seed ratio had highest system productivity index.

  17. Factors influencing adolescent whole grain intake: A theory-based qualitative study.

    Science.gov (United States)

    Kamar, Maya; Evans, Charlotte; Hugh-Jones, Siobhan

    2016-06-01

    Whole grain consumption is associated with reduced risk of chronic disease. One-fifth of UK adults and children do not consume any whole grains, and adolescents have low consumption rates. Factors affecting whole grain intake among adolescents are not well understood. This study examined the socio-economic, environmental, lifestyle and psychological factors likely to influence consumption and explored whether outcomes aligned with behavioural predictors proposed in the Reasoned Action Approach. Five focus groups explored young people's attitudes towards, knowledge and consumption of wholegrain foods, as well as barriers to, and facilitators of, consumption. Participants were male and female adolescents (n = 50) aged 11-16 years from mixed socioeconomic backgrounds and ethnicities, recruited through schools in the city of Leeds, UK. Focus groups were analysed using thematic analysis. Most participants had tried wholegrain food products, with cereal products being the most popular. Many recognised whole grain health benefits related to digestive health but not those related to heart disease or cancers. Several barriers to eating whole grains were identified including: difficulties in identifying wholegrain products and their health benefits; taste and visual appeal; and poor availability outside the home. Suggested facilitators of consumption were advertisements and educational campaigns, followed by improved sensory appeal, increased availability and choice, and tailoring products for young people. All constructs of the Theory of Reasoned Action were identifiable in the data, suggesting that the factors influencing whole grain intake in adolescents are well captured by this model. Study outcomes may inform research and health promotion to increase whole grain intake in this age group. Copyright © 2016 Elsevier Ltd. All rights reserved.

  18. Visual Perception-Based Statistical Modeling of Complex Grain Image for Product Quality Monitoring and Supervision on Assembly Production Line.

    Directory of Open Access Journals (Sweden)

    Jinping Liu

    Full Text Available Computer vision as a fast, low-cost, noncontact, and online monitoring technology has been an important tool to inspect product quality, particularly on a large-scale assembly production line. However, the current industrial vision system is far from satisfactory in the intelligent perception of complex grain images, comprising a large number of local homogeneous fragmentations or patches without distinct foreground and background. We attempt to solve this problem based on the statistical modeling of spatial structures of grain images. We present a physical explanation in advance to indicate that the spatial structures of the complex grain images are subject to a representative Weibull distribution according to the theory of sequential fragmentation, which is well known in the continued comminution of ore grinding. To delineate the spatial structure of the grain image, we present a method of multiscale and omnidirectional Gaussian derivative filtering. Then, a product quality classifier based on sparse multikernel-least squares support vector machine is proposed to solve the low-confidence classification problem of imbalanced data distribution. The proposed method is applied on the assembly line of a food-processing enterprise to classify (or identify automatically the production quality of rice. The experiments on the real application case, compared with the commonly used methods, illustrate the validity of our method.

  19. Visual Perception-Based Statistical Modeling of Complex Grain Image for Product Quality Monitoring and Supervision on Assembly Production Line.

    Science.gov (United States)

    Liu, Jinping; Tang, Zhaohui; Zhang, Jin; Chen, Qing; Xu, Pengfei; Liu, Wenzhong

    2016-01-01

    Computer vision as a fast, low-cost, noncontact, and online monitoring technology has been an important tool to inspect product quality, particularly on a large-scale assembly production line. However, the current industrial vision system is far from satisfactory in the intelligent perception of complex grain images, comprising a large number of local homogeneous fragmentations or patches without distinct foreground and background. We attempt to solve this problem based on the statistical modeling of spatial structures of grain images. We present a physical explanation in advance to indicate that the spatial structures of the complex grain images are subject to a representative Weibull distribution according to the theory of sequential fragmentation, which is well known in the continued comminution of ore grinding. To delineate the spatial structure of the grain image, we present a method of multiscale and omnidirectional Gaussian derivative filtering. Then, a product quality classifier based on sparse multikernel-least squares support vector machine is proposed to solve the low-confidence classification problem of imbalanced data distribution. The proposed method is applied on the assembly line of a food-processing enterprise to classify (or identify) automatically the production quality of rice. The experiments on the real application case, compared with the commonly used methods, illustrate the validity of our method.

  20. Malting Characteristics of Some Sorghum and Millet Grain Varieties Grown in Kenya

    International Nuclear Information System (INIS)

    Makokha, A.O; Makwaka, A.M; Oniang'o, R.O; Njoroge, S.M

    1999-01-01

    Industrial malt in Kenya for commercial beer production is made exclusively from barley. This study explored the potential of producing suitable malt from some sorghum and finger millet grain varieties grown in Kenya. Malting characteristics of two sorghum grain varieties, KARI Mtama-1 and local Red variety, and that of finger millet was done and compared to that of barley. Among the grain characteristics determined before malting were water sensitivity, polyphenol (tannin) content and total protein. The grain was malted by striping in water for 48 h, followed by germination for four days at 25 degrees celcious, then kilned at 50 degrees celcious for 24 h. The malting characteristics determined included total soluble N, free amino N, wort pH and fermentable sugars. The local red sorghum and millet had high polyphenol content while KARI Mtama-1 and barley had low levels. KARI Mtama-1 had positive water sensitivity while barley had negative sensitivity. Finger millet and local red sorghum were water insensitive. Free amino N was 113, 125, 144, and 154mg 100g - 1 malt for millet, barley, local Red and KARI Mtama-1, respectively. Total fermentation sugars were 307, 477, 610 and 178 mg 1 - 1 for finger millet, local red, barley and KARI Mtama 1 , respectively. The results showed that that the proteolytic and amyloytic characteristics of the KARI Mtama-1 malt are largely similar to those of barley. Hence the KARI Mtama-1 malt are largely similar to those of barley. Hence the KARI Mtama-1 has good potential fro conventional lager beer production. Malts of local Red sorghum grain and millet may be more suitable for industrial production of opaque/cloudy beer

  1. Transcriptome study of storage protein genes of field-grown barley in response to inorganic nitrogen fertilizers

    DEFF Research Database (Denmark)

    Hansen, Michael; Bowra, Stewe; Lange, Mette

    2010-01-01

    The storage proteins of barley, in terms of both amino acid profile and quantity, are traits strongly influenced by the amount of nitrogen applied. Given this, we performed a developmental expression analysis of the genes from barley grains grown under field conditions to further our understanding...... of the molecular and biochemical mechanisms underpinning nitrogen utilization. A barley grain specific micro-array, where a comprehensive set of genes involved in nitrogen mobilization, storage protein synthesis and amino acid metabolism were assembled, was used to obtain a global but focused gene expression...... profile under different N regimes. Reviewing the expression of the storage protein homologues within the families revealed markedly different temporal profiles; for example, some alleles were expressed very early in development. Furthermore, the differential temporal expression of the homologues suggested...

  2. Approaches to improving the nutritional quality of barley seed proteins

    International Nuclear Information System (INIS)

    Shewry, P.R.; Bright, S.W.J.; Burgess, S.R.; Miflin, B.J.

    1984-01-01

    The poor nutritional quality of barley grain is determined by the low level of lysine in the prolamin storage proteins (hordein). These account for between 35 to 50% of the total grain nitrogen, depending on the nutritional status of the plant. There is a reduced proportion of hordein in mutant high lysine lines but these also have reduced synthesis of storage carbohydrates and hence low yields. Three strategies for improvement are discussed. Increases in the lysine content of hordein may be difficult to achieve because of the presence of complex families of structural genes. It would also be necessary to insert a large number of additional lysine residues. Two more promising approaches are to increase the level of expression of genes coding for lysine-rich globulin storage proteins and to increase the pool of free lysine by selecting mutant lines with relaxed feedback regulation of lysine synthesis. (author)

  3. Locally available grains as carriers of Newcastle Disease V4 ...

    African Journals Online (AJOL)

    Laboratory trials were conducted to evaluate the potential of locally available grains as vehicles for the administration of the Australian Heat Resistant V4 vaccine. Feeds tested included millet, sunflower, crushed maize, rapoko, barley, sorghum and rice. One hundred and fifty four indigenous chickens were randomly divided ...

  4. Nutrient Utilization By Rabbits Fed Brewers' Dried Grains From ...

    African Journals Online (AJOL)

    An experiment was conducted to evaluate the energy and protein of Brewers' Dried Grains (BDG) produced from different proportions of barley, maize and sorghum on the performance of rabbits. Sixteen (16) rabbits made up of New Zealand and Chinchilla, eight (8) weeks old averaging 1.20kg were used in the trial in a ...

  5. Determination of ontogenetic selection criteria for grain yield in ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-06-03

    Jun 3, 2009 ... spring barley in cool and short-season environments. Key words: Correlation coefficient, path-coefficient analysis, Hordeum vulgare, grain yield and components, ontogenetic characteristics. INTRODUCTION ... Many researchers have used a linear correlation analysis to ascertain relationships between ...

  6. Estimated metabolizable energy yields of perennial and annual grass swards compared with those of spring barley and oat

    Directory of Open Access Journals (Sweden)

    O. NIEMELÄINEN

    2008-12-01

    Full Text Available The dry matter yields of cultivar trials (from 1976 to 1998 at 15 sites in Finland of perennial grass sward (meadow fescue (Festuca pratensis cv. Boris, annual grass sward (Italian ryegrass (Lolium multiflorum, cv. Barmultra and Mitos, spring barley (Hordeum vulgare cv. Otra, Arra, Arve and oat (Avena sativa cv. Veli were used to estimate metabolisable energy yields (MEY by using the feeds metabolisable energy concentration values (MJ/kg DM from ruminant feed tables. Harvest index (HI of barley and oat was set to 50%, and straw yields and whole crop cereal silage (WCCS yields were generated from grain yields accordingly. The MEY in the third year of perennial grass (81.4 GJ/ha was significantly lower than that in the first (90.0 GJ/ha and second years (90.7 GJ/ha. However, on average, the one to three year old perennial grass-swards had significantly higher MEY than the annual grass swards (87.7 vs. 83.3 GJ/ha, respectively. The MEYs of perennial and annual grass swards were substantially higher than the MEY of barley grain (52.7 GJ/ha and oat grain (47. 8 GJ/ha. When the total herbage of cereals, i.e. straw and grain, was used in the calculations, at a ME value of 6.0 MJ/ kg dry matter (DM for straw, the MEY of barley rose to 75.8 GJ/ha and that of oat to 72.6 GJ/ha. Additionally, the MEY of barley was estimated in the WCCS production situation by converting total herbage to MEY by using ME value 9.9 MJ/kg DM. The MEY of barley in the WCCS calculations was 77.4 GJ/ha, which was significantly lower than the MEY of annual and perennial grass swards. The MEY of barley was a 60%, b 86%, and c 88% of the average MEY of one to three year old perennial grass sward when the MEY of barley was calculated according to a grain, b grain + straw, and c whole crop cereal silage. Perennial grass sward was the most productive of the studied crops in metabolisable energy production for ruminants.

  7. Assessment of genetic diversity among barley cultivars and breeding lines adapted to the US Pacific Northwest, and its implications in breeding barley for imidazolinone-resistance.

    Directory of Open Access Journals (Sweden)

    Sachin Rustgi

    Full Text Available Extensive application of imidazolinone (IMI herbicides had a significant impact on barley productivity contributing to a continuous decline in its acreage over the last two decades. A possible solution to this problem is to transfer IMI-resistance from a recently characterized mutation in the 'Bob' barley AHAS (acetohydroxy acid synthase gene to other food, feed and malting barley cultivars. We focused our efforts on transferring IMI-resistance to barley varieties adapted to the US Pacific Northwest (PNW, since it comprises ∼23% (335,000 ha of the US agricultural land under barley production. To effectively breed for IMI-resistance, we studied the genetic diversity among 13 two-rowed spring barley cultivars/breeding-lines from the PNW using 61 microsatellite markers, and selected six barley genotypes that showed medium to high genetic dissimilarity with the 'Bob' AHAS mutant. The six selected genotypes were used to make 29-53 crosses with the AHAS mutant and a range of 358-471 F1 seeds were obtained. To make informed selection for the recovery of the recipient parent genome, the genetic location of the AHAS gene was determined and its genetic nature assessed. Large F2 populations ranging in size from 2158-2846 individuals were evaluated for herbicide resistance and seedling vigor. Based on the results, F3 lines from the six most vigorous F2 genotypes per cross combination were evaluated for their genetic background. A range of 20%-90% recovery of the recipient parent genome for the carrier chromosome was observed. An effort was made to determine the critical dose of herbicide to distinguish between heterozygotes and homozygotes for the mutant allele. Results suggested that the mutant can survive up to the 10× field recommended dose of herbicide, and the 8× and 10× herbicide doses can distinguish between the two AHAS mutant genotypes. Finally, implications of this research in sustaining barley productivity in the PNW are discussed.

  8. Grain boundaries at the surface of consolidated MgO nanocrystals and acid-base functionality.

    Science.gov (United States)

    Vingurt, Dima; Fuks, David; Landau, Miron V; Vidruk, Roxana; Herskowitz, Moti

    2013-09-21

    The increase of the surface basicity-acidity of MgO material by factors of 1.8-3.0 due to consolidation of its nanocrystals was demonstrated by the indicator titration. It was shown that the parallel increase of surface acidity and basicity is attributed to the formation of grain boundaries (GB) after MgO aerogel densification. A simple model predicting the increase of surface acidity-basicity of MgO that correlates with the results of direct measurements was proposed. The model is based on the study of the fine atomic structure at GB surface areas in consolidated MgO nanocrystals in the framework of Density Functional Theory. It is found that the displacements of coordinatively unsaturated surface ions near the GB are significant at the distances ~3-4 atomic layers from the geometrical contact plane between nanocrystals. The detailed analysis of atomic positions inside GB demonstrated the coordination deficiency of surface atoms at the GB areas leading to the formation of stretched bonds and to creation of low coordinated surface ions due to splitting of coordination numbers of surface atoms belonging to GB areas. Density of states for electrons shows the existence of additional states in the band gap close to the bottom of the conduction band. The adsorption energy of CO2 molecules atop oxygen atoms exposed at surface GB areas is of the same order of magnitude as that reported for oxygen atoms at crystallographic edges and corners of MgO crystals. It provides additional options for bonding of molecules at the surface of nanocrystalline MgO increasing the adsorption capacity and catalytic activity.

  9. Fine-grained Database Field Search Using Attribute-Based Encryption for E-Healthcare Clouds.

    Science.gov (United States)

    Guo, Cheng; Zhuang, Ruhan; Jie, Yingmo; Ren, Yizhi; Wu, Ting; Choo, Kim-Kwang Raymond

    2016-11-01

    An effectively designed e-healthcare system can significantly enhance the quality of access and experience of healthcare users, including facilitating medical and healthcare providers in ensuring a smooth delivery of services. Ensuring the security of patients' electronic health records (EHRs) in the e-healthcare system is an active research area. EHRs may be outsourced to a third-party, such as a community healthcare cloud service provider for storage due to cost-saving measures. Generally, encrypting the EHRs when they are stored in the system (i.e. data-at-rest) or prior to outsourcing the data is used to ensure data confidentiality. Searchable encryption (SE) scheme is a promising technique that can ensure the protection of private information without compromising on performance. In this paper, we propose a novel framework for controlling access to EHRs stored in semi-trusted cloud servers (e.g. a private cloud or a community cloud). To achieve fine-grained access control for EHRs, we leverage the ciphertext-policy attribute-based encryption (CP-ABE) technique to encrypt tables published by hospitals, including patients' EHRs, and the table is stored in the database with the primary key being the patient's unique identity. Our framework can enable different users with different privileges to search on different database fields. Differ from previous attempts to secure outsourcing of data, we emphasize the control of the searches of the fields within the database. We demonstrate the utility of the scheme by evaluating the scheme using datasets from the University of California, Irvine.

  10. Cloning and Characterization of Purple Acid Phosphatase Phytases from Wheat, Barley, Maize, and Rice[W][OA

    Science.gov (United States)

    Dionisio, Giuseppe; Madsen, Claus K.; Holm, Preben B.; Welinder, Karen G.; Jørgensen, Malene; Stoger, Eva; Arcalis, Elsa; Brinch-Pedersen, Henrik

    2011-01-01

    Barley (Hordeum vulgare) and wheat (Triticum aestivum) possess significant phytase activity in the mature grains. Maize (Zea mays) and rice (Oryza sativa) possess little or virtually no preformed phytase activity in the mature grain and depend fully on de novo synthesis during germination. Here, it is demonstrated that wheat, barley, maize, and rice all possess purple acid phosphatase (PAP) genes that, expressed in Pichia pastoris, give fully functional phytases (PAPhys) with very similar enzyme kinetics. Preformed wheat PAPhy was localized to the protein crystalloid of the aleurone vacuole. Phylogenetic analyses indicated that PAPhys possess four conserved domains unique to the PAPhys. In barley and wheat, the PAPhy genes can be grouped as PAPhy_a or PAPhy_b isogenes (barley, HvPAPhy_a, HvPAPhy_b1, and HvPAPhy_b2; wheat, TaPAPhy_a1, TaPAPhy_a2, TaPAPhy_b1, and TaPAPhy_b2). In rice and maize, only the b type (OsPAPhy_b and ZmPAPhy_b, respectively) were identified. HvPAPhy_a and HvPAPhy_b1/b2 share 86% and TaPAPhya1/a2 and TaPAPhyb1/b2 share up to 90% (TaPAPhy_a2 and TaPAPhy_b2) identical amino acid sequences. despite of this, PAPhy_a and PAPhy_b isogenes are differentially expressed during grain development and germination. In wheat, it was demonstrated that a and b isogene expression is driven by different promoters (approximately 31% identity). TaPAPhy_a/b promoter reporter gene expression in transgenic grains and peptide mapping of TaPAPhy purified from wheat bran and germinating grains confirmed that the PAPhy_a isogene set present in wheat/barley but not in rice/maize is the origin of high phytase activity in mature grains. PMID:21220762

  11. Isozyme differences in barley mutants

    International Nuclear Information System (INIS)

    AI-Jibouri, A.A.M.; Dham, K.M.

    1990-01-01

    Full text: Thirty mutants (M 11 ) of barley (Hordeum vulgare L.) induced by physical and chemical mutagens were analysed for isozyme composition using polyacrylamide gel electrophoresis. Results show that these mutants were different in the isozymes leucine aminopeptidase, esterase and peroxidase. The differences included the number of forms of each enzyme, relative mobility value and their intensity on the gel. Glutamate oxaloacetate transaminase isozyme was found in six molecular forms and these forms were similar in all mutants. (author)

  12. Energy consumption in barley and turnip rape cultivation for bioethanol and biodiesel (RME) production

    Energy Technology Data Exchange (ETDEWEB)

    Mikkola, Hannu; Ahokas, Jukka [University of Helsinki, Faculty of Agriculture and Forestry, Department of Agricultural Sciences, FIN-00014 Helsingin yliopisto (Finland); Pahkala, Katri [MTT, Agrifood Research Finland, Crop Science and Technology, FIN-31600 Jokioinen (Finland)

    2011-01-15

    The energy consumption for six spring barley (Hordeum vulgare L.) production chains and five spring turnip rape (Brassica rapa ssp. oleifera (DC) Metsg.) production chains were compared with each other and in relation to the energy content of the seed yield. Two cultivation intensities, standard and intensive production, were used for barley. Fertiliser production and grain drying were the most energy consuming phases of the chains. The production of nitrogen fertiliser alone accounted for 1/3-1/2 of the total energy consumption of the production chains. If barley were direct drilled and the yield stored in airtight silos, instead of drying, the energy consumption would decrease by 30-34%. Use of wood-chips instead of oil for grain drying would decrease the use of fossil fuel to the same extent. The input-output ratios for the intensive barley production chains were 0.18-0.25. They were somewhat lower than the ratios for the standard production intensity. The intensive production was more energy efficient despite higher input rates. The input-output ratios for turnip rape production were 0.32-0.34. The energy consumption for manufacturing, repair and maintenance of machines and buildings requires more research because it is a significant factor but the data available are largely old and few studies have been conducted. (author)

  13. Effects of grain source, grain processing, and protein degradability on rumen kinetics and microbial protein synthesis in Boer kids.

    Science.gov (United States)

    Brassard, M-E; Chouinard, P Y; Berthiaume, R; Tremblay, G F; Gervais, R; Martineau, R; Cinq-Mars, D

    2015-11-01

    Microbial protein synthesis in the rumen would be optimized when dietary carbohydrates and proteins have synchronized rates and extent of degradation. The aim of this study was to evaluate the effect of varying ruminal degradation rate of energy and nitrogen sources on intake, nitrogen balance, microbial protein yield, and kinetics of nutrients in the rumen of growing kids. Eight Boer goats (38.2 ± 3.0 kg) were used. The treatments were arranged in a split-plot Latin square design with grain sources (barley or corn) forming the main plots (squares). Grain processing methods and levels of protein degradability formed the subplots in a 2 × 2 factorial arrangement for a total of 8 dietary treatments. The grain processing method was rolling for barley and cracking for corn. Levels of protein degradability were obtained by feeding untreated soybean meal (SBM) or heat-treated soybean meal (HSBM). Each experimental period lasted 21 d, consisting of a 10-d adaptation period, a 7-d digestibility determination period, and a 4-d rumen evacuation and sampling period. Kids fed with corn had higher purine derivatives (PD) excretion when coupled with SBM compared with HSBM and the opposite occurred with barley-fed kids ( ≤ 0.01). Unprocessed grain offered with SBM led to higher PD excretion than with HSBM whereas protein degradability had no effect when processed grain was fed ( ≤ 0.03). Results of the current experiment with high-concentrate diets showed that microbial N synthesis could be maximized in goat kids by combining slowly fermented grains (corn or unprocessed grains) with a highly degradable protein supplement (SBM). With barley, a more rapidly fermented grain, a greater microbial N synthesis was observed when supplementing a low-degradable protein (HSBM).

  14. Particle size affects short-term preference behavior of brown-egg laying hens fed diets based on corn or barley.

    Science.gov (United States)

    Herrera, J; Saldaña, B; Guzmán, P; Ibáñez, M A; Mandalawi, H; Cámara, L; Mateos, G G

    2018-04-01

    We studied the influence of particle size of the main cereal of the diet on preference behavior by laying hens. Diets formed a 2 × 5 factorial with 2 main cereals (corn vs. barley) and 5 grinding sizes of the cereal (4, 6, 8, 10, and 12 mm screen). Each treatment was replicated 5 times (10 hens each). After a fasting period of 8 h, hens received their respective experimental diets from 06.00 to 14.00 hours. The geometric mean diameter (GMD) and the geometric standard deviation of the residuals in the feeder were determined every 2 hours. In addition, CP, ash, and Ca contents of the feeds were determined at the start and at the end of the experimental period. The experimental design was completely randomized with data analyzed as repeated measures with particle size and cereal as main effects. The GMD of the original feeds increased with increases in screen size and was greater for the barley than for the corn diets. The difference in GMD between the original diets and the residuals measured at 2 h intervals decreased as the experiment progressed (P feed, an effect more pronounced for the minerals. Independent of the coarseness of the feed sieve, ash and Ca contents were higher in the uneaten feed at 14.00 h than in the original diets. Hens showed a clear preference for coarse particles irrespective of the concentration of CP, ash, or Ca in the different fractions of the diets. Data showed that birds under-consumed Ca during the morning, a period in which the requirements for mineral deposition are low. In summary, hens showed a significant preference for coarser particles, an effect that was more evident when the cereals were ground coarse. Hens, however, did not show any preference for consuming those feed fractions with greater CP, ash, or Ca contents.

  15. [Features of the formation of self-fertile euploid lines (2n = 42) by self-pollination of the 46-chromosome barley-wheat BC1 hybrid Hordeum marinum subsp. gussoneanum Hudson (= H. geniculatum All.) (2n = 28) x Triticum aestivum L. (2n = 42)].

    Science.gov (United States)

    Pershina, L A; Trubacheeva, N V; Rakovtseva, T S; Belova, L I; Deviatkina, E P; Kravtsova, L A

    2006-12-01

    We studied some features of the development of self-fertile 42-chromosome lines on the base of self-pollination progeny of 46-chromosome plants obtained by backcrossing of barley--wheat hybrids Hordeum marinum subsp. gussoneanum Hudson (= H. geniculatum All.) (2n = 28) x Triticum aestivum L. (2n = 42). The stabilization of karyotypes, resulting in 42-chromosome plants of the wheat type was generally completed by generation BC1F10. The plants of all self-pollination progenies, including BC1F10, showed some phenotypic traits characteristic of wild barley. Plants of BC1F10 with the chromosome sets 2n = 42 and 2n = 42 + t were analyzed by RAPD with a set of 115 primers. Fragments of the wild barley genome were detected in RAPD patterns with 19 primers. Cross-hybridization confirmed that these fragments belonged to the wild barley genome. We raised four phenotypically different 42-chromosome lines from grains obtained from plants of generation BC1F10, and these lines proved to be cytogenetically stable and self-fertile when grown in the field.

  16. Phenotypic, physiological and malt quality analyses of US barley varieties subjected to short periods of heat and drought stress

    Science.gov (United States)

    Drought and heat are major abiotic stresses that significantly reduce crop yield and seed quality. In this study, we examined the impact of heat, drought and combined effect of heat and drought stress imposed during the grain filling stage in 18 US spring barley varieties. These impacts were assesse...

  17. Repeated dose oral toxicological evaluation of concentrated barley β-glucan in CD-1 mice including a recovery phase

    NARCIS (Netherlands)

    Delaney, B.; Carlson, T.; Zheng, G.-H.; Hess, R.; Knutson, N.; Frazer, S.; Ostergren, K.; Zijverden, M. van; Knippels, L.; Jonker, D.; Penninks, A.

    2003-01-01

    The cholesterol-lowering effect observed following consumption of oats and barley is attributable to the β-glucan component of the soluble fiber fraction of these cereal grains. β-Glucan has also been reported to modulate immune activity, however, few studies have evaluated the hematological effects

  18. Evaluation of the toxicity of concentrated barley β-glucan in a 28-day feeding study in Wistar rats

    NARCIS (Netherlands)

    Delaney, B.; Carlson, T.; Frazer, S.; Zheng, T.; Hess, R.; Ostergren, K.; Kierzek, K.; Haworth, J.; Knutson, N.; Junker, K.; Jonker, D.

    2003-01-01

    β-Glucans are water-soluble cell-wall polysaccharides consisting of (1→3,1→4)-linked β-D-glucopyranosyl monomers that comprise a considerable proportion of soluble fiber from certain grains including oats and barley. Consumption of foods containing β-glucan or β-glucan-enriched fractions prepared

  19. Synthesis, processing and export of cytoplasmic endo-ß-1,4-xylanase from barley aleurone during germination

    NARCIS (Netherlands)

    Caspers, M.P.M.; Lok, F.; Sinjorgo, K.M.C.; Zeijl, M. van; Nielsen, K.A.; Cameron-Mills, V.

    2001-01-01

    We have identified the major endo-β-l,4-xylanase (XYN-1) in the aleurone of germinating barley grain, and show that it is expressed as a precursor of Mr 61 500 with both N- and C-terminal propeptides. XYN-1 is synthesized as an inactive enzyme in the cytoplasm, and only becomes active at a late

  20. Influence of phosphorus grain boundary segregation on fracture behaviour of iron-base alloys

    Czech Academy of Sciences Publication Activity Database

    Janovec, J.; Pokluda, J.; Lejček, Pavel

    567-568, - (2007), s. 33-38 ISSN 0255-5476 Institutional research plan: CEZ:AV0Z10100520 Keywords : austenitic stainless steel * Fe-Si-P alloy * grain boundary segregation precipitation * instrumented impact test * Auger elektron spectroscopy * transmission elektron microscopy Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 0.399, year: 2005

  1. Size estimation of uniform grain: Dispersion strengthened Cu-based system

    Czech Academy of Sciences Publication Activity Database

    Velgosová, O.; Saxl, Ivan; Besterci, M.

    2003-01-01

    Roč. 10, č. 3 (2003), s. 181-190 ISSN 1210-2717 R&D Projects: GA ČR GA201/99/0269 Institutional research plan: CEZ:AV0Z1019905; CEZ:AV0Z1019905 Keywords : grain size estimation * w-s diagram Subject RIV: BB - Applied Statistics, Operational Research

  2. Mesoporous PbI2 assisted growth of large perovskite grains for efficient perovskite solar cells based on ZnO nanorods

    Science.gov (United States)

    Li, Shibin; Zhang, Peng; Chen, Hao; Wang, Yafei; Liu, Detao; Wu, Jiang; Sarvari, Hojjatollah; Chen, Zhi David

    2017-02-01

    Perovskite solar cells (PSCs) have attracted great attention due to their low cost and high power conversion efficiency (PCE). However, the defects and grain boundaries in perovskite films dramatically degrade their performance. Here, we show a two-step annealing method to produce mesoporous PbI2 films for growth of continuous, pinhole-free perovskite films with large grains, followed by additional ethanol vapor annealing of perovskite films to reduce the defects and grain boundaries. The large perovskite grains dramatically suppress the carrier recombination, and consequently we obtain ZnO-nanorod-based PSCs that exhibit the best efficiency of 17.3%, with high reproducibility.

  3. Ensemble Empirical Mode Decomposition based methodology for ultrasonic testing of coarse grain austenitic stainless steels.

    Science.gov (United States)

    Sharma, Govind K; Kumar, Anish; Jayakumar, T; Purnachandra Rao, B; Mariyappa, N

    2015-03-01

    A signal processing methodology is proposed in this paper for effective reconstruction of ultrasonic signals in coarse grained high scattering austenitic stainless steel. The proposed methodology is comprised of the Ensemble Empirical Mode Decomposition (EEMD) processing of ultrasonic signals and application of signal minimisation algorithm on selected Intrinsic Mode Functions (IMFs) obtained by EEMD. The methodology is applied to ultrasonic signals obtained from austenitic stainless steel specimens of different grain size, with and without defects. The influence of probe frequency and data length of a signal on EEMD decomposition is also investigated. For a particular sampling rate and probe frequency, the same range of IMFs can be used to reconstruct the ultrasonic signal, irrespective of the grain size in the range of 30-210 μm investigated in this study. This methodology is successfully employed for detection of defects in a 50mm thick coarse grain austenitic stainless steel specimens. Signal to noise ratio improvement of better than 15 dB is observed for the ultrasonic signal obtained from a 25 mm deep flat bottom hole in 200 μm grain size specimen. For ultrasonic signals obtained from defects at different depths, a minimum of 7 dB extra enhancement in SNR is achieved as compared to the sum of selected IMF approach. The application of minimisation algorithm with EEMD processed signal in the proposed methodology proves to be effective for adaptive signal reconstruction with improved signal to noise ratio. This methodology was further employed for successful imaging of defects in a B-scan. Copyright © 2014. Published by Elsevier B.V.

  4. Grains and Starchy Vegetables

    Science.gov (United States)

    ... Every time you choose to eat a starchy food, make it count! Leave the processed white flour-based products, especially the ones with added ... wheat grain is ground up. "Refined" flours like white and enriched wheat flour include only ... whole grain foods can be a challenge. Some foods only contain ...

  5. Two point deterministic model for acquisition of in vitro pollen grain androgenetic capacity based on wheat studies

    OpenAIRE

    Grando, Magali Ferrari; Moraes-Fernandes, Maria Irene B. de

    1997-01-01

    This article discusses, from the standpoint of cellular biology, the deterministic and indeterministic androgenesis theories. The role of the vacuole and of various types of stresses on deviation of the microspore from normal development and the point where androgenetic competence is acquired are examined. Based on extensive literature review and data on wheat studies from our laboratory, a model for androgenetic capacity of pollen grain is proposed. A two point deterministic model for in vit...

  6. Compositional changes during grain-based fuel ethanol production and method modifications to recover co-products for human or pet food utilization

    Science.gov (United States)

    The surge in global supply of distillers dried grains with solubles (DDGS) in recent years has stimulated many new investigations into this important co-product of grain-based fuel ethanol production. Compositional changes during the entire dry grind process has been one of them, since DDGS is char...

  7. Density and relative frequency effects on competitive interactions and resource use in pea–barley intercrops

    DEFF Research Database (Denmark)

    Hauggaard-Nielsen, H.; Andersen, H.K.; Jørnsgaard, B.

    2006-01-01

    . Earlier seedling emergence gave barley an initial growth advantage, assessed using the relative efficiency index (REIc), whereas pea was in general more growth efficient once the initial growth phase had been passed. This reversal in relative growth efficiency along with the observation that early barley...... of the growing period and more so in the pea dominated intercrop. At the final harvest land equivalent ratios (LER) of 0.9-1.2 express resource complementarity in almost all studied intercrops, complementarity that was not directly affected by changes in plant density or relative frequency. Intercropped pea did...... or specific grain yield composition are wanted. Keywords: Competition dynamics; Grain quality; Hordeum vulgare; Intercropping; Nitrogen use; Organic farming; Pisum sativum; Weeds; Yield Abbreviations: IC, mixed intercropping; LER, land equivalent ratio; N, nitrogen; REIc, relative efficiency index; SC, sole...

  8. Proteome analysis of dissected barley seed tissue during germination and radicle elongation

    DEFF Research Database (Denmark)

    Bønsager, Birgit Christine

    2007-01-01

    by mass spectrometry based on the 2D gel pattern of APX in germinated barley embryos, which indicated the presence of several APX forms with different pI values. The barley limit dextrinase inhibitor (LDI) is thought to be at least partly responsible for the presence of non-fermentable branched dextrins...... at the protein or the DNA level. In addition, germination of barley seeds is of interest for the brewing industry since this process corresponds to the steeping process that starts the industrial malting. In the present study a proteomics approach was employed to understand the initial changes in the water...... elongation. These proteins had different tissue distribution and most of them either remained constant or decreased in abundance during radicle elongation, except for ascorbate peroxidase (APX) which was only present in the germinating barley embryo after 24 h. Other proteins involved in osmotic and salinity...

  9. Roles of Hydroxynitrile Glucosides in Barley

    DEFF Research Database (Denmark)

    Roelsgaard, Pernille Sølvhøj

    that hydroxynitrile glucosides can act as carbohydrate and nitrogen storage compounds and as reactive oxygen species (ROS) quenching compounds. A positive correlation between the hydroxynitrile glucoside content in barley and susceptibility toward the barley powdery mildew fungus (Blumeria graminis f.sp. hordei, Bgh...

  10. Associated field mycobiota on malting barley

    DEFF Research Database (Denmark)

    Andersen, Birgitte; Thrane, Ulf; Svendsen, Anne

    1996-01-01

    in the composition of field mycobiota compared with the pesticide-free barley. The determining factor on the mycobiota was the location. The dominant species on barley was Alternaria infectoria Simmons. The most frequent Fusarium species detected were F. tricinctum (Corda) Sacc. and F. avenaceum (Fr.) Sacc. Results...... implied an interaction between Alternaria and Fusarium on the surface of the kernels....

  11. Molecular characterization of two lipoxygenases from barley

    NARCIS (Netherlands)

    Mechelen, J.R. van; Schuurink, R.C.; Smits, M.; Graner, A.; Douma, A.C.; Sedee, N.J.A.; Schmitt, N.F.; Valk, B.E.

    1999-01-01

    Two full-length lipoxygenase cDNA sequences (LoxB and LoxC) from barley (Hordeum distichum cv. L. Triumph) are described. The cDNAs share high homology with the barley LoxA cDNA. Southern blotting experiments indicate single copy numbers of the three lipoxygenase genes. RFLP mapping revealed the

  12. COMPARISON OF THE FROST RESISTANCE OF BARLEY ...

    African Journals Online (AJOL)

    Preferred Customer

    immediate recovery of the photosynthetic quantum yield after freezing. Landraces which showed the highest cold tolerance were found to acclimatize best. Key words/phrases: Barley, chlorophyll fluorescence, cold acclimation, Ethiopia, frost tolerance. INTRODUCTION. Barley (Hordeum vulgare L.) is a traditional crop.

  13. GWAS of Barley Phenotypes Established Under Future Climate Conditions of Elevated Temperature, CO2, O3 and Elevated Temperature and CO2 Combined

    DEFF Research Database (Denmark)

    Ingvordsen, Cathrine Heinz; Backes, G.; Lyngkjær, M. F.

    2015-01-01

    Climate change is likely to decrease crop yields worldwide. Developing climate resilient cultivars is one way to combat this production scarcity, however, little is known of crop response to future climate conditions and in particular the variability within crops.In Scandinavia, barley is widely...... and [CO2] the grain yield of barley decreased 29% and harvested grain protein declined 22%. Vast variation was identified among the individual barley accessions, which should be exploited by plant breeders in the development of climate resilient cultivars.A genome-wide association study (GWAS) of recorded...... phenotypes and 3967 SNP-markers identified 60 marker-trait associations (-logp>2.95)2. Markers were found associated with grain yield under all three single factor treatments temperature, [CO2] and [O3], as well as with stability over treatments.To our knowledge, this is the first study that evaluates...

  14. Comparative energy content and amino acid digestibility of barley obtained from diverse sources fed to growing pigs.

    Science.gov (United States)

    Wang, Hong Liang; Shi, Meng; Xu, Xiao; Ma, Xiao Kang; Liu, Ling; Piao, Xiang Shu

    2017-07-01

    Two experiments were conducted to determine the content of digestible energy (DE) and metabolizable energy (ME) as well as the apparent ileal digestibility (AID) and standardized ileal digestibility (SID) of crude protein (CP) and amino acids (AA) in barley grains obtained from Australia, France or Canada. In Exp. 1, 18 growing barrows (Duroc×Landrace×Yorkshire; 31.5±3.2 kg) were individually placed in stainless-steel metabolism crates (1.4×0.7×0.6 m) and randomly allotted to 1 of 3 test diets. In Exp. 2, eight crossbred pigs (30.9±1.8 kg) were allotted to a replicate 3×4 Youden Square designed experiment with three periods and four diets. Two pigs received each diet during each test period. The diets included one nitrogen-free diet and three test diets. The relative amounts of gross energy (GE), CP, and all AA in the Canadian barley were higher than those in Australian and French barley while higher concentrations of neutral detergent fiber, acid detergent fiber, total dietary fiber, insoluble dietary fiber and β-glucan as well as lower concentrations of GE and ether extract were observed in the French barley compared with the other two barley sources. The DE and ME as well as the SID of histidine, isoleucine, leucine and phenylalanine in Canadian barley were higher (pAustralia was superior to barley obtained from France which is important information in developing feeding systems for growing pigs where imported grains are used.

  15. Effect of prothioconazole-based fungicides on Fusarium head blight, grain yield and deoxynivalenol accumulation in wheat under field conditions

    Directory of Open Access Journals (Sweden)

    Miriam HAIDUKOWSKI

    2012-05-01

    Full Text Available The effect of triazole-based treatments on Fusarium head blight (FHB, grain yields and the accumulation of deoxynivalenol (DON in harvested wheat kernels was evaluated by means of twenty multi-site field experiments performed during five consecutive growing seasons (from 2004‒2005 to 2008‒2009 in Italy. Fungicide treatments were carried out on different cultivars of common wheat (cv. Serio, Blasco, Genio and Savio and durum wheat (cv. Orobel, Saragolla, San Carlo, Levante, Duilio, Karur and Derrik after artificial inoculation with a mixture of toxigenic Fusarium graminearum and F. culmorum strains. The application of fungicides containing prothioconazole (Proline® or Prosaro® at the beginning of anthesis (BBCH 61 resulted in a consistent reduction of FHB disease severity (by between 39 and 93% and DON levels in wheat kernels (by between 40 and 91% and increased wheat yields (from 0.4 to 5.6 t ha-1, average 2.2 t ha-1, as compared to the untreated/inoculated control. Fungicides containing tebuconazole (Folicur® SE and cyproconazole plus prochloraz (Tiptor® Xcell showed a reduced effectiveness compared with prothioconazole-based treatments. All fungicide treatments were more effective in reducing DON and increasing grain yields of common wheat than durum wheat. Results showed that the application of fungicides containing prothioconazole at the beginning of anthesis provided a strong reduction of FHB disease, allowing both an increase in grain yields and a considerable reduction of DON content in wheat kernels.

  16. Evaluation of Range-based Methods for Localization in Grain Storages

    DEFF Research Database (Denmark)

    Juul, Jakob Pilegaard; Green, Ole; Jacobsen, Rune Hylsberg

    2016-01-01

    Monitoring biomass storages by using wireless sensor networks with localization capabilities can help prevent economic losses during storage, help to improve the grain quality and lower costs during drying. In this article, the received signal strength was used to perform localization of wireless......-field electromagnetic ranging were performed to evaluate the performance of the method. It was found that the experimental setup worked best between 2 - 7 m where the average error was 4.9% of the actual distance....

  17. Performance of process-based models for simulation of grain N in crop rotations across Europe

    Czech Academy of Sciences Publication Activity Database

    Xiaogang, Y.; Kesebaum, K. C.; Kollas, C.; Manevski, K.; Baby, S.; Beaudoin, N.; Öztürk, I.; Gaiser, T.; Wu, L.; Hoffmann, M.; Charfeddine, M.; Conradt, T.; Constantin, J.; Ewert, F.; de Cortazar-Atauri, I. G.; Giglio, L.; Hlavinka, Petr; Hoffmann, H.; Launay, M.; Louarn, G.; Manderscheid, R.; Mary, B.; Mirschel, W.; Nendel, C.; Pacholski, A.; Palouso, T.; Ripoche-Wachter, D.; Rötter, R. P.; Ruget, F.; Sharif, B.; Trnka, Miroslav; Ventrella, D.; Weigel, H-J.; Olesen, J. E.

    2017-01-01

    Roč. 154, JUN (2017), s. 63-77 ISSN 0308-521X R&D Projects: GA MŠk(CZ) LO1415; GA MZe QJ1310123 Institutional support: RVO:67179843 Keywords : Calibration * Crop model * Crop rotation * Grain N content * Model evaluation * Model initialization Subject RIV: EH - Ecology, Behaviour OBOR OECD: Environmental sciences (social aspects to be 5.7) Impact factor: 2.571, year: 2016

  18. Fungal growth during malting of barley

    Directory of Open Access Journals (Sweden)

    Kocić-Tanackov Sunčica D.

    2005-01-01

    Full Text Available Fungi were isolated and identified in two samples of winter two-row barley (SSK3 and SSK6 harvested in 2003, Kragujevac location, during micromalting. Fungi were isolated and identified in barley before the micromalting, after the 1st, 2nd and 3rd day of steeping, the first day and after the germination after kilning and after malt degermination. The total fungi count was followed in both barley samples, during the mentioned phases. The total count of fungi was also determined in the steeping water, and the isolation and identification was performed after the steeping process. Change of the total count of fungi during barley micromalting was exponentional. During barley micromalting nine fungi genera were isolated: Phoma, Alternaria, Fusarium aspergillus, Cladosporium, Geotrichum, Scopulariopsis, Aureobasidium and Mucor. The most frequent genera were: Phoma, Alternaria and Fusarium. In water for steeping, five genera were identified: Geotrichum, Fusarium, Phoma Cladosporium and Mucor. The most frequent genera was Phoma.

  19. Chickpea Performance Compared to Pea, Barley and Oat in Central Europe: Growth Analysis and Yield

    OpenAIRE

    Neugschwandtner, R.W.; Wichmann, S.; Gimplinger, D.M.; Wagentristl, H.; Kaul, H.P.

    2015-01-01

    An increase of grain legume production is essential for meeting feed protein need in Europe. Warming climates offer the opportunity for adapting crops with a more warm-season growth habit such as chickpea (Cicer arietinum L.) in cool, northern latitude areas. Therefore, yield and growth analysis of chickpea were assessed in a two-year field experiment in Central Europe (Raasdorf, Austria) and compared to pea, barley and oat, which are well adapted crops in that region. Chickpea had a lower ab...

  20. Chickpea Performance Compared to Pea, Barley and Oat in Central Europe: Growth Analysis and Yield

    OpenAIRE

    Neugschwandtner, R.W.; Wichmann, S.; Gimplinger, D.M.; Wagentristl, H.; Kaul, H.P.

    2013-01-01

    An increase of grain legume production is essential for meeting feed protein need in Europe. Warming climates offer the opportunity for adapting crops with a more warm-season growth habit such as chickpea (Cicer arietinum L.) in cool, northern latitude areas. Therefore, yield and growth analysis of chickpea were assessed in a two-year field experiment in Central Europe (Raasdorf, Austria) and compared to pea, barley and oat, which are well adapted crops in that region. Chickpea had a lower ab...

  1. OPTIMIZATION OF POTASSIUM NITRATE BASED SOLID PROPELLANT GRAINS FORMULATION USING RESPONSE SURFACE METHODOLOGY

    Directory of Open Access Journals (Sweden)

    Oladipupo Olaosebikan Ogunleye

    2015-08-01

    Full Text Available This study was designed to evaluate the effect of propellant formulation and geometry on the solid propellant grains internal ballistic performance using core, bates, rod and tubular and end-burn geometries. Response Surface Methodology (RSM was used to analyze and optimize the effect of sucrose, potassium nitrate and carbon on the chamber pressure, temperature, thrust and specific impulse of the solid propellant grains through Central Composite Design (CCD of the experiment. An increase in potassium nitrate increased the specific impulse while an increase in sucrose and carbon decreased specific impulse. The coefficient of determination (R2 for models of chamber pressure, temperature, thrust and specific impulse in terms of composition and geometry were 0.9737, 0.9984, 0.9745 and 0.9589, respectively. The optimum specific impulse of 127.89 s, pressure (462201 Pa, temperature (1618.3 K and thrust (834.83 N were obtained using 0.584 kg of sucrose, 1.364 kg of potassium nitrate and 0.052 kg of carbon as well as bate geometry. There was no significant difference between the calculated and experimented ballistic properties at p < 0.05. The bate grain geometry is more efficient for minimizing the oscillatory pressure in the combustion chamber.

  2. Determination of Local Barley (Hordeum Vulgare) Crop Coefficient ...

    African Journals Online (AJOL)

    Bheema

    , 0.88 and. 0.68 kg m. -3 ... irrigated barley fields. This could be due to lack of information on water requirement of local barley. General crop coefficient values for various crops including for barley are available in ..... Soil salinity and barley.

  3. A critical comparison of coarse-grained structure-based approaches and atomic models of protein folding.

    Science.gov (United States)

    Hu, Jie; Chen, Tao; Wang, Moye; Chan, Hue Sun; Zhang, Zhuqing

    2017-05-31

    Structure-based coarse-grained Gō-like models have been used extensively in deciphering protein folding mechanisms because of their simplicity and tractability. Meanwhile, explicit-solvent molecular dynamics (MD) simulations with physics-based all-atom force fields have been applied successfully to simulate folding/unfolding transitions for several small, fast-folding proteins. To explore the degree to which coarse-grained Gō-like models and their extensions to incorporate nonnative interactions are capable of producing folding processes similar to those in all-atom MD simulations, here we systematically compare the computed unfolded states, transition states, and transition paths obtained using coarse-grained models and all-atom explicit-solvent MD simulations. The conformations in the unfolded state in common Gō models are more extended, and are thus more in line with experiment, than those from all-atom MD simulations. Nevertheless, the structural features of transition states obtained by the two types of models are largely similar. In contrast, the folding transition paths are significantly more sensitive to modeling details. In particular, when common Gō-like models are augmented with nonnative interactions, the predicted dimensions of the unfolded conformations become similar to those computed using all-atom MD. With this connection, the large deviations of all-atom MD from simple diffusion theory are likely caused in part by the presence of significant nonnative effects in folding processes modelled by current atomic force fields. The ramifications of our findings to the application of coarse-grained modeling to more complex biomolecular systems are discussed.

  4. Apparent and standardized ileal digestibility of amino acids in diverse barley cultivars fed to growing pigs.

    Science.gov (United States)

    Wang, Hongliang; Ma, Xiaokang; Xu, Xiao; Shi, Meng; Piao, Xiangshu

    2017-12-01

    The objectives of this study were to determine the chemical composition, ileal amino acid (AA) digestibility of barley varieties and to develop equations to predict the AA digestibility based on the chemical characteristics of individual barley. A wide selection of nine barley varieties in the main growing regions of China was used in the experiment. Ten crossbred pigs (30.9 ± 1.8 kg) were allotted to a 6 × 10 Youden Square. The treatments included a nitrogen-free diet and nine barley test diets. Considerable variation was observed in the content of neutral detergent fiber, acid detergent fiber, crude protein (CP) and all AAs among the barley samples. The standardized ileal digestibility (SID) of indispensable AAs with the exception of arginine, phenylalanine and threonine were different (P digestibility of CP and AAs among barley varieties. It is difficult to predict the SID of most of the amino acids in barely based upon chemical characteristics. © 2017 Japanese Society of Animal Science.

  5. microRNAs participate in gene expression regulation and phytohormone cross-talk in barley embryo during seed development and germination.

    Science.gov (United States)

    Bai, Bin; Shi, Bo; Hou, Ning; Cao, Yanli; Meng, Yijun; Bian, Hongwu; Zhu, Muyuan; Han, Ning

    2017-09-06

    Small RNA and degradome sequencing have identified a large number of miRNA-target pairs in plant seeds. However, detailed spatial and temporal studies of miRNA-mediated regulation, which can reflect links between seed development and germination are still lacking. In this study, we extended our investigation on miRNAs-involved gene regulation by a combined analysis of seed maturation and germination in barley. Through bioinformatics analysis of small RNA sequencing data, a total of 1324 known miRNA families and 448 novel miRNA candidates were identified. Of those, 16 known miRNAs with 40 target genes, and three novel miRNAs with four target genes were confirmed based on degradome sequencing data. Conserved miRNA families such as miR156, miR168, miR166, miR167, and miR894 were highly expressed in embryos of developing and germinating seeds. A barley-specific miRNA, miR5071, which was predicted to target an OsMLA10-like gene, accumulated at a high level, suggesting its involvement in defence response during these two developmental stages. Based on target prediction and Kyoto Encyclopedia of Genes and Genomes analysis of putative targets, nine highly expressed miRNAs were found to be related to phytohormone signalling and hormone cross-talk. Northern blot and qRT-PCR analysis showed that these miRNAs displayed differential expression patterns during seed development and germination, indicating their different roles in hormone signalling pathways. In addition, we showed that miR393 affected seed development through targeting two genes encoding the auxin receptors TIR1/AFBs in barley, as over-expression of miR393 led to an increased length-width ratio of seeds, whereas target mimic (MIM393)-mediated inhibition of its activity decreased the 1000-grain weight of seeds. Furthermore, the expression of auxin-responsive genes, abscisic acid- and gibberellic acid-related genes was altered in miR393 misexpression lines during germination and early seedling growth. Our work

  6. Meat bone meal as fertiliser for barley and oat

    Directory of Open Access Journals (Sweden)

    L. CHEN

    2008-12-01

    Full Text Available The traditional production of mineral N and P fertilisers is unsustainable due its reliance on fossil fuels in the case of N, and on limited mineral resource stocks in the case of P. The use of alternative or complementary fertilisers that originate from organic waste materials is gaining interest. Organic farms, especially arable organic farms without livestock, need usable sources of plant nutrients. Meat bone meal (MBM, a potential organic fertiliser for agricultural crops, contains considerable amounts of nutrients (on average 8% N, 5% P, 1% K and 10% Ca. In EU countries, Commission regulation (EC No 181/2006 authorised the use of MBM as an organic fertiliser. In this study, MBM was compared to conventional mineral NPK fertiliser. Two randomised complete block split-plot field experiments were conducted: one with spring barley (Hordeum vulgare in two years; and another with oat (Avena sativa for three years, including a fourth year of testing for residual effect. Compared to mineral fertiliser (20% N, 3% P and 9% K, MBM was applied at three N levels: 60, 90 and 120 kg N ha-1. The grain yield of both cereal species supported by MBM, did not differ from the yield obtained with the mineral fertiliser at any N level. At 120 kg N ha-1, the grain yield level with either type was ca. 4500 kg ha-1 of barley and 5000 kg ha-1 of oat, representing fair averages for Finnish conditions. Moreover, MBM and mineral fertilisation showed no differences in quality in terms of 1000-grain weight, test-weight, protein content and protein yield. Since MBM has a low N/P ratio, P was applied in surplus to attain comparable N levels. Therefore MBM fertilisation should be fitted for crop rotation and for meeting environmental requirements.;

  7. Using ATR-FT/IR molecular spectroscopy to detect effects of blend DDGS inclusion level on the molecular structure spectral and metabolic characteristics of the proteins in hulless barley

    Science.gov (United States)

    Zhang, Xuewei; Yu, Peiqiang

    2012-09-01

    The objectives of this study were to investigate the effects of inclusion of a bioethanol co-product of blend DDGS (wheat:corn = 70%:30%) on protein molecular structure spectral and metabolic characteristics in hulless barley-based feed using ATR-FT/IR molecular spectroscopy. Hulless barley grain with the blend DDGS were mixed in the five ratios. The results showed that when blend DDGS was included at an increased ratio, predicted truly absorbed protein supply was highly and linearly increased (P < 0.05) from 98 to 245 g kg-1 DM and degraded protein balance was increased (P < 0.05) from -1 to 75 g kg-1 DM. The ratio of amide I to II peak area was increased (P < 0.05) in the original combination samples but decreased (P < 0.05) in the in situ 48 h residue samples. The ratio of α-helix to β-sheet peak height was quadratically changed with increasing inclusion rate of blend DDGS in the original samples, but no difference among the in situ 48 h residue samples, indicating completion of protein degradation. No correlation was found between protein 2nd structures and protein nutrient profiles not only for the original combination samples (except NPN) but also for in situ 48 h residue samples. This study may provide information on how protein molecular structure and metabolic characteristic changes after feed combination and how more effectively utilize hulless barley and blend co-products for dairy and beef cattle.

  8. NS Kosmaj i NS Maestral: New ns quality feed barley varieties

    Directory of Open Access Journals (Sweden)

    Mirosavljević Milan

    2016-01-01

    Full Text Available Grain yield is one of the most important and complex traits in small grain breeding programs and its continuous improvement represent the main priority during the development of new cultivars. In addition to grain yield, feed manufacturers and farmers request precise definition and improvement of feed barley quality. Two new varieties of winter six-row barley - NS Kosmaj and NS Maestral were registered by Ministry of Agriculture, Forestry and Water management of Republic of Serbia in 2015. These varieties are results of a long breeding process at the Institute of Field and Vegetable crops, Novi Sad. The two-year long trials of the Commission for the registration of varieties of the Republic of Serbia have established that the NS Kosmaj and NS Maestral are distinct, uniform and stable varieties, and at all locations and for all years examined, both have produced standard yield levels, but of a significantly higher quality. These new varieties of winter six-row feed barley are characterized by high genetic potential for yield, which is over 12 t ha-1, and a high protein content desirable for animal feed.

  9. Resistance to Barley Leaf Stripe

    DEFF Research Database (Denmark)

    Nørgaard Knudsen, J. C.

    1986-01-01

    in well adapted Northwest European spring cultivars. Virulence matching two hitherto not overcome resistances was demonstrated. Differences in apparent race nonspecific or partial resistance were also present, changing the percentage of infected plants of susceptible genotypes from about 20 to 44 per cent.......Ten barley [Hordeum vulgare] genotypes were inoculated with twelve isolates of Pyrenophora graminea of diverse European and North African origin. Race specific resistance occurred. Four, possibly five, genetically different sources of race-specific resistance were found, three of them occurring...

  10. Esterase Isoenzyme Variants in Barley

    DEFF Research Database (Denmark)

    Hvid, S.; Nielsen, G.

    1977-01-01

    Gene symbols are proposed for 27 esterase isoenzyme alleles representing 10 loci in barley. Two new esterase loci, Est 9 and Est 10, each with an active and a silent allele, and three new alleles in previously described loci were found. A few chemical and physical characteristics of the different...... esterase isoenzyme systems were studied. The heat inactivation temperature differed for the isoenzymes coded by most of the loci, whereas the substrate and inhibitor specificity of the isoenzymes was less distinct. A possible relationship between some of the systems is discussed....

  11. Enumeration of fungi in barley

    CSIR Research Space (South Africa)

    Rabie

    1997-04-01

    Full Text Available stream_source_info rabie_1997.pdf.txt stream_content_type text/plain stream_size 26510 Content-Encoding ISO-8859-1 stream_name rabie_1997.pdf.txt Content-Type text/plain; charset=ISO-8859-1 hmatiod Journal of...FoodMiaubiology ELSEVIER International Journal of Food Microbiology 35 (1997) Il7- 127 Enumeration of fungi in barley C.J. Rabie*, A. Liibben, G.J. Marais, H. Jansen van Vuuren CSIR Food Scienw and Technology, P.0 Bos 395. Prrroria 0001...

  12. Effects of different restricted feeding strategies on performance of growing and finishing dairy bulls offered grass silage and barley based diets

    Directory of Open Access Journals (Sweden)

    Katariina Manni

    2017-06-01

    Full Text Available The objective of this study was to determine the effects of restricted feeding strategies on performance of growing and finishing dairy bulls. The feeding experiment comprised in total 32 Finnish Ayrshire bulls with an initial mean live weight (LW of 122 kg and age of 114 days. Feeding treatments were silage ad libitum and daily barley allowance of 93 g kg-1 LW0.60 (A; restricted feeding (R at 0.80 × A; increasing feeding (I similar to R until LW of 430 kg and thereafter similar to A; and decreasing feeding (D similar to A until LW of 430 kg and thereafter similar to R. Restricted feeding strategies decreased daily dry matter intake and LW gain and increased the time to reach the target carcass weight (300 kg. Bulls on I exhibited compensatory growth. There were no significant differences in feed efficiency between the treatments. The present experiment indicates that silage intake ad libitum and supplemented with concentrate resulted in most effective beef production.

  13. Preventive and Therapeutic Role of Functional Ingredients of Barley Grass for Chronic Diseases in Human Beings

    Directory of Open Access Journals (Sweden)

    Yawen Zeng

    2018-01-01

    Full Text Available Barley grass powder is the best functional food that provides nutrition and eliminates toxins from cells in human beings; however, its functional ingredients have played an important role as health benefit. In order to better cognize the preventive and therapeutic role of barley grass for chronic diseases, we carried out the systematic strategies for functional ingredients of barley grass, based on the comprehensive databases, especially the PubMed, Baidu, ISI Web of Science, and CNKI, between 2008 and 2017. Barley grass is rich in functional ingredients, such as gamma-aminobutyric acid (GABA, flavonoids, saponarin, lutonarin, superoxide dismutase (SOD, K, Ca, Se, tryptophan, chlorophyll, vitamins (A, B1, C, and E, dietary fiber, polysaccharide, alkaloid, metallothioneins, and polyphenols. Barley grass promotes sleep; has antidiabetic effect; regulates blood pressure; enhances immunity; protects liver; has anti-acne/detoxifying and antidepressant effects; improves gastrointestinal function; has anticancer, anti-inflammatory, antioxidant, hypolipidemic, and antigout effects; reduces hyperuricemia; prevents hypoxia, cardiovascular diseases, fatigue, and constipation; alleviates atopic dermatitis; is a calcium supplement; improves cognition; and so on. These results support that barley grass may be one of the best functional foods for preventive chronic diseases and the best raw material of modern diet structure in promoting the development of large health industry and further reveal that GABA, flavonoids, SOD, K-Ca, vitamins, and tryptophan mechanism of barley grass have preventive and therapeutic role for chronic diseases. This paper can be used as a scientific evidence for developing functional foods and novel drugs for barley grass for preventive chronic diseases.

  14. Anthocyanin and proanthocyanidin contents, antioxidant activity, and in situ degradability of black and red rice grains.

    Science.gov (United States)

    Hosoda, Kenji; Sasahara, Hideki; Matsushita, Kei; Tamura, Yasuaki; Miyaji, Makoto; Matsuyama, Hiroki

    2018-03-02

    An experiment was conducted to assess the antioxidant contents and activities of colored rice grains and to evaluate their nutritive characteristics in terms of chemical composition and in situ ruminal degradation. Ten cultivars of colored rice grains (Oryza sativa L.) collected from several areas of Japan were studied, and control rice without pigment, maize, barley, and wheat grains were used as control grains. Their chemical compositions, pigment, polyphenol contents, total antioxidant capacity (TAC), and degradation characteristics were determined. The starch contents of the colored rice grains were in the range of 73.5-79.6%, similar to that of the control rice grain. The black and red rice grains contained anthocyanin (maximum: 5045.6 µg/g) and proanthocyanidin (maximum: 3060.6 µg/g) at high concentrations as their principal pigments, respectively. There were significantly (p rice grains, indicating that the increase in pigment contents also contributed to the increased polyphenol content and TAC values in the colored rice grains. The dry matter and starch degradation characteristics, as represented by c (fractional degradation rate of slowly degradable fraction) and by the effective degradability, of the colored rice grains and the control rice grain were ranked as follows among commonly used grains: wheat > barley ≥ rice > maize. The colored rice grains also included the most-digestible starch, since their potential degradable fraction and actual degradability at 48 h incubation were almost 100%. Colored rice grains have high potential to be used as antioxidant sources in addition to starch sources in ruminants.

  15. The effect of grain source and grain processing on performance of feedlot cattle: a review.

    Science.gov (United States)

    Owens, F N; Secrist, D S; Hill, W J; Gill, D R

    1997-03-01

    Effects of grain species and grain processing method on DMI, rate and efficiency of gain, and feeding value for cattle fed high concentrate diets were appraised by statistically compiling results from 605 comparisons from feeding trials published in North American journals and experiment station bulletins since 1974. Metabolizable energy (ME) values for each grain and processing method were calculated by quadratic procedures from DMI and animal performance. Averaged across processing methods, ME values for corn, milo, and wheat grain (3.40, 3.22, and 3.46 Mcal/kg DM) fell within 9% of ME estimates from NRC (1996) for beef cattle. In contrast, ME values for barley and oats grain (3.55 and 3.46 Mcal/kg DM) were 24% and 17% greater than NRC (1996) estimates. Compared with the dry rolled forms, high moisture corn and milo resulted in lower ADG and DMI. Compared with dry rolling, either steam rolling or flaking of corn, milo, and wheat decreased DMI without decreasing ADG and improved feed efficiency by 10, 15, and 10%, respectively. Compared with dry rolled grain, steam flaking increased (P moisture content of high-moisture corn decreased dry matter intake without depressing ADG and improved efficiency and increased ME of the grain. Compared with steam flakes of moderate thinness, processing milo or barley to a very thin flake tended to reduce ADG and failed to improve feed efficiency. The ideal roughage source and roughage moisture content for maximum ME and ADG varied with grain processing method. Feeding corn silage rather than alfalfa and wet rather than dry roughage depressed (P moisture corn grain but tended to increase both with steam-flaked corn or wheat.

  16. Allelopathic effect of ryegrass (lolium persicum) and wild mustard (sinapis arvensis) on barley

    International Nuclear Information System (INIS)

    Baziar, M.R.; Farahvash, F.; Mirshekari, B.; Rashidi, V.

    2014-01-01

    Most crop plants and weeds have allelopathic effects and analysis of these effects on plants in crop alteration and successive planting is very important. In this research the allelopathic ability of different parts and concentrations of two weeds, Lolium Persicum (Ryegrass) and Sinapis arvensis (wild mustered), on growth characteristics of two barley varieties was studied in the greenhouse using a completely randomized design with four replications. Test factors consisted of two barley varieties (Valfajr and Rehane), three weed organs (root, stalk, leaf) and four concentrations of extracts of weed organs (25, 50, 75 and control or distilled water). After the preparation of extracts of different weed organs with different concentrations, their effect on growth characteristics of barley plant was evaluated. Finally, seedling length, rootlet length caulicle length, wet weight of seedling, dry weight of seedling were measured. Also, the above two seeds had significant effects on the two strains of barley and could influence growth characteristics of barley. Based on the results of present study, one can argue that Ryegrass (Lolium Persicum) and wild mustard (Sinapis arvensis) can strongly affect germination, growth and performance of barley through production of chemical materials with allelopathic properties, leading unfavorable growth and product yield. (author)

  17. Multiscale design of coarse-grained elastic network-based potentials for the μ opioid receptor.

    Science.gov (United States)

    Fossépré, Mathieu; Leherte, Laurence; Laaksonen, Aatto; Vercauteren, Daniel P

    2016-09-01

    Despite progress in computer modeling, most biological processes are still out of reach when using all-atom (AA) models. Coarse-grained (CG) models allow classical molecular dynamics (MD) simulations to be accelerated. Although simplification of spatial resolution at different levels is often investigated, simplification of the CG potential in itself has been less common. CG potentials are often similar to AA potentials. In this work, we consider the design and reliability of purely mechanical CG models of the μ opioid receptor (μOR), a G protein-coupled receptor (GPCR). In this sense, CG force fields (FF) consist of a set of holonomic constraints guided by an elastic network model (ENM). Even though ENMs are used widely to perform normal mode analysis (NMA), they are not often implemented as a single FF in the context of MD simulations. In this work, various ENM-like potentials were investigated by varying their force constant schemes and connectivity patterns. A method was established to systematically parameterize ENM-like potentials at different spatial resolutions by using AA data. To do so, new descriptors were introduced. The choice of conformation descriptors that also include flexibility information is important for a reliable parameterization of ENMs with different degrees of sensitivity. Hence, ENM-like potentials, with specific parameters, can be sufficient to accurately reproduce AA MD simulations of μOR at highly coarse-grained resolutions. Therefore, the essence of the flexibility properties of μOR can be captured with simple models at different CG spatial resolutions, opening the way to mechanical approaches to understanding GPCR functions. Graphical Abstract All atom structure, residue interaction network and coarse-grained elastic network models of the μ opioid receptor (μOR).

  18. Preliminary Assessment of the Effect of Saline Water Used in Irrigation on the Growth of the Local Barley Cultivar (Harma)

    OpenAIRE

    Yasseen, B.T. [بسام طه ياسين

    2001-01-01

    ABSTRACT The effect of gradual increase m soil salinity, using diluted solutions ofseawater, on growth and yield of the local barley cul-tivar (Harma) was examined. Harma barley did not withstand osmotic shock higher than ECe of 14 dSm-1 , while it permitted better growth and produced grains at ECe of 23 to 28 dSm-1 when achieved by gradual manner. Growth analysis of individual leaves was investigated during the course of gradual increase in the level of soil salinity. Area of leaves and t...

  19. Breeding cultivars of barley and mustard containing biochemical mutants

    International Nuclear Information System (INIS)

    Oram, R.N.

    1990-01-01

    Full text: The inactivation of dominant and co-dominant alleles is becoming increasingly important in changing the composition of seed carbohydrates, protein, oil, fibre and secondary products to suit modern food and feed technologies. In barley, breeding lines adapted to south-eastern Australian conditions have been developed containing a waxy endosperm from the Japanese variety 'Sumire Mochi', the high lysine gene lys from cv. 'Hiproly' of Ethiopia, and the induced high lysine mutant gene lys 3a from 'Risoe 1508'. The improved mutant lines yield 12-34% less than the highest yielding feed barley. The lys and lys 3a alleles suppress the formation of prolamins, the waxy allele inhibits the formation of amylose. It seems difficult to modify the background genotype to fully compensate for the reduction of major storage carbohydrate or protein compounds. However, waxy barleys have uses in some human foods and a premium can be paid to producers. The grain of the provisionally-patented waxy cultivar Wasiro is suitable for pearling. It contains 5% β-glucan (soluble fibre) and therefore should be as effective as oat bran for reducing blood cholesterol. In Indian mustard (Brassica juncea), three cultivars differing in date of maturity, each containing the spontaneous mutant alleles for low erucic acid levels in the seed oil, have been developed to produce a high quality, mildly flavoured cooking/salad oil. The concentration of glucosinolates in the seed meal must be reduced to make it palatable and non-toxic to pigs and poultry. Three B. juncea lines were treated in up to four successive generations with gamma rays or EMS. 60,000 seed samples were analysed in subsequent generations. Two induced mutants with reduced glucosinolate concentrations are now available besides 4 naturally-occurring sources with only little reduced yields. Recombination may give a high-yielding low erucic acid and low glucosinolate variety of B. juncea. (author)

  20. Thiamine treatments alleviate aphid infestations in barley and pea.

    Science.gov (United States)

    Hamada, Afaf M; Jonsson, Lisbeth M V

    2013-10-01

    Treatment of plants with thiamine (Vitamin B1) has before been shown to activate plant defence against microorganisms. Here, we have studied the effects of thiamine treatments of plants on aphid reproduction and behaviour. The work was mainly carried out with bird cherry-oat aphid (Rhopalosiphum padi L.) on barley (Hordeum vulgare L.). Aphid population growth and aphid acceptance on plants grown from seeds soaked in a 150μM thiamine solution were reduced to ca. 60% of that on control plants. R. padi life span and the total number of offspring were reduced on barley plants treated with thiamine. Healthy aphids and aphids infected with the R. padi virus were similarly affected. Spraying or addition of thiamine at 150μM to nutrient solutions likewise resulted in reduced aphid population growth to ca. 60%, as did plant exposure to thiamine odour at 4mM. Thiamine treatments resulted in reduced aphid population growth also when tested with grain aphid (Sitobion avenae F.) on barley and pea aphid (Acyrthosiphon pisum H.) on pea (Pisum sativum L.). There was no direct effect of thiamine on aphid reproduction or thiamine odour on aphid behaviour, as evaluated using artificial diets and by olfactometer tests, respectively. Two gene sequences regulated by salicylic acid showed higher transcript abundance and one gene sequence regulated by methyl jasmonate showed lower transcript abundance in thiamine-treated plants but not in control plants after aphid infestation. These results suggest that the aphid antibiosis and antixenosis effects may be related to priming of defence, but more studies are needed to explain the effects against aphids. Copyright © 2013 Elsevier Ltd. All rights reserved.

  1. Strengthening of Fe-Mn-Si based shape memory alloys by grain size refinement

    International Nuclear Information System (INIS)

    Sato, A.; Masuya, T.; Kumai, S.; Inoue, A.

    2000-01-01

    Degree of the shape memory effect was measured either by bending, tensile and compression tests in the temperature range 77∝300 K. The yield stress increased substantially by the grain size refinement, yet maintaining a good shape memory effect. In addition to usual mentioned slow strain rate tests (about 10 -3 s -1 ), shape deformation was given at high strain rate (10 3 s -1 ) by hammering, in order to induce fine structure. It is also found that the shape memory effect under an opposing force was improved by the high-speed deformation. (orig.)

  2. A high-speed multiplexer-based fine-grain pipelined architecture for digital fuzzy logic controllers

    Science.gov (United States)

    Rashidi, Bahram; Masoud Sayedi, Sayed

    2015-12-01

    Design and implementation of a high-speed multiplexer-based fine-grain pipelined architecture for a general digital fuzzy logic controller has been presented. All the operators have been designed at gate level. For the multiplication, a multiplexer-based modified Wallace tree multiplier has been designed, and for the division and addition multiplexer-based non-restoring parallel divider and multiplexer-based Manchester adder have been used, respectively. To further increase the processing speed, fine-grain pipelining technique has been employed. By using this technique, the critical path of the circuit is broken into finer pieces. Based on the proposed architecture, and by using Quartus II 9.1, a sample two-input, one-output digital fuzzy logic controller with eight rules has been successfully synthesised and implemented on Stratix II field programmable gate array. Simulations were carried out using DSP Builder in the MATLAB/Simulink tool at a maximum clock rate of 301.84 MHz.

  3. Characterization of Antibodies for Grain-Specific Gluten Detection.

    Science.gov (United States)

    Sharma, Girdhari M; Rallabhandi, Prasad; Williams, Kristina M; Pahlavan, Autusa

    2016-03-01

    Gluten ingestion causes immunoglobulin E (IgE)-mediated allergy or celiac disease in sensitive individuals, and a strict gluten-free diet greatly limits food choices. Immunoassays such as enzyme-linked immunosorbent assay (ELISA) are used to quantify gluten to ensure labeling compliance of gluten-free foods. Anti-gluten antibodies may not exhibit equal affinity to gluten from wheat, rye, and barley. Moreover, because wheat gluten is commonly used as a calibrator in ELISA, accurate gluten quantitation from rye and barley contaminated foods may be compromised. Immunoassays utilizing grain-specific antibodies and calibrators may help improve gluten quantitation. In this study, polyclonal antibodies raised against gluten-containing grain-specific peptides were characterized for their immunoreactivity to gluten from different grain sources. Strong immunoreactivity to multiple gluten polypeptides from wheat, rye, and barley was observed in the range 34 to 43 kDa with anti-gliadin, 11 to 15 and 72 to 95 kDa with anti-secalin, and 30 to 43 kDa with anti-hordein peptide antibodies, respectively. Minimal or no cross-reactivity with gluten from other grains was observed among these antibodies. The anti-consensus peptide antibody raised against a repetitive amino acid sequence of proline and glutamine exhibited immunoreactivity to gluten from wheat, rye, barley, and oat. The antibodies exhibited similar immunoreactivity with most of the corresponding grain cultivars by ELISA. The high specificity and minimal cross-reactivity of grain-specific antibodies suggest their potential use in immunoassays for accurate gluten quantitation. © Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

  4. Sequencing-based analysis of the bacterial and fungal composition of kefir grains and milks from multiple sources.

    Science.gov (United States)

    Marsh, Alan J; O'Sullivan, Orla; Hill, Colin; Ross, R Paul; Cotter, Paul D

    2013-01-01

    Kefir is a fermented milk-based beverage to which a number of health-promoting properties have been attributed. The microbes responsible for the fermentation of milk to produce kefir consist of a complex association of bacteria and yeasts, bound within a polysaccharide matrix, known as the kefir grain. The consistency of this microbial population, and that present in the resultant beverage, has been the subject of a number of previous, almost exclusively culture-based, studies which have indicated differences depending on geographical location and culture conditions. However, culture-based identification studies are limited by virtue of only detecting species with the ability to grow on the specific medium used and thus culture-independent, molecular-based techniques offer the potential for a more comprehensive analysis of such communities. Here we describe a detailed investigation of the microbial population, both bacterial and fungal, of kefir, using high-throughput sequencing to analyse 25 kefir milks and associated grains sourced from 8 geographically distinct regions. This is the first occasion that this technology has been employed to investigate the fungal component of these populations or to reveal the microbial composition of such an extensive number of kefir grains or milks. As a result several genera and species not previously identified in kefir were revealed. Our analysis shows that the bacterial populations in kefir are dominated by 2 phyla, the Firmicutes and the Proteobacteria. It was also established that the fungal populations of kefir were dominated by the genera Kazachstania, Kluyveromyces and Naumovozyma, but that a variable sub-dominant population also exists.

  5. Sequencing-based analysis of the bacterial and fungal composition of kefir grains and milks from multiple sources.

    Directory of Open Access Journals (Sweden)

    Alan J Marsh

    Full Text Available Kefir is a fermented milk-based beverage to which a number of health-promoting properties have been attributed. The microbes responsible for the fermentation of milk to produce kefir consist of a complex association of bacteria and yeasts, bound within a polysaccharide matrix, known as the kefir grain. The consistency of this microbial population, and that present in the resultant beverage, has been the subject of a number of previous, almost exclusively culture-based, studies which have indicated differences depending on geographical location and culture conditions. However, culture-based identification studies are limited by virtue of only detecting species with the ability to grow on the specific medium used and thus culture-independent, molecular-based techniques offer the potential for a more comprehensive analysis of such communities. Here we describe a detailed investigation of the microbial population, both bacterial and fungal, of kefir, using high-throughput sequencing to analyse 25 kefir milks and associated grains sourced from 8 geographically distinct regions. This is the first occasion that this technology has been employed to investigate the fungal component of these populations or to reveal the microbial composition of such an extensive number of kefir grains or milks. As a result several genera and species not previously identified in kefir were revealed. Our analysis shows that the bacterial populations in kefir are dominated by 2 phyla, the Firmicutes and the Proteobacteria. It was also established that the fungal populations of kefir were dominated by the genera Kazachstania, Kluyveromyces and Naumovozyma, but that a variable sub-dominant population also exists.

  6. Impact of Pre-Anthesis Water Deficit on Yield and Yield Components in Barley (Hordeum vulgare L. Plants Grown under Controlled Conditions

    Directory of Open Access Journals (Sweden)

    Zakaria I. Al-Ajlouni

    2016-05-01

    Full Text Available Drought at pre-anthesis stages can influence barley growth and results in yield losses. Therefore, it is important to understand how drought at pre-anthesis can affect different traits associated with yield reduction in barley. The objective of this study was to understand the relevance of the genetic background of major flowering time genes in barley plants subjected to pre-anthesis drought and its impact on yield and yield components. A glasshouse experiment using a Randomized Complete Block Design was conducted to investigate the effect of drought and its timing on yield and yield components on eleven barley genotypes, which were selected to represent genetic diversity of major flowering time genes (PPDH1, PPDH2, HvVrn1, HvVrn2 and HvVrn3. Barley plants were exposed to three water regimes, non-stressed and stressed, which was applied at two pre-anthesis growth stages, tillering (SS and stem elongation (SE. Results identified differences among genotypes in all measured traits. Grain yield, grain number and "thousand kernel weight" were reduced in all genotypes due to drought, irrespective of the growth stage. Early flowering genotypes had better performance as reflected in higher yield compared with late flowering genotypes. Results verified the fundamental importance of early flowering to improve productivity in response to pre-anthesis drought. The results of this study can help in selecting barley lines for future breeding purposes with improved resilience to drought conditions in Mediterranean environments.

  7. Investigations of barley stripe mosaic virus as a gene silencing vector in barley roots and in Brachypodium distachyon and oat

    Directory of Open Access Journals (Sweden)

    Nilsson Lena

    2010-11-01

    Full Text Available Abstract Background Gene silencing vectors based on Barley stripe mosaic virus (BSMV are used extensively in cereals to study gene function, but nearly all studies have been limited to genes expressed in leaves of barley and wheat. However since many important aspects of plant biology are based on root-expressed genes we wanted to explore the potential of BSMV for silencing genes in root tissues. Furthermore, the newly completed genome sequence of the emerging cereal model species Brachypodium distachyon as well as the increasing amount of EST sequence information available for oat (Avena species have created a need for tools to study gene function in these species. Results Here we demonstrate the successful BSMV-mediated virus induced gene silencing (VIGS of three different genes in barley roots, i.e. the barley homologues of the IPS1, PHR1, and PHO2 genes known to participate in Pi uptake and reallocation in Arabidopsis. Attempts to silence two other genes, the Pi transporter gene HvPht1;1 and the endo-β-1,4-glucanase gene HvCel1, in barley roots were unsuccessful, probably due to instability of the plant gene inserts in the viral vector. In B. distachyon leaves, significant silencing of the PHYTOENE DESATURASE (BdPDS gene was obtained as shown by photobleaching as well as quantitative RT-PCR analysis. On the other hand, only very limited silencing of the oat AsPDS gene was observed in both hexaploid (A. sativa and diploid (A. strigosa oat. Finally, two modifications of the BSMV vector are presented, allowing ligation-free cloning of DNA fragments into the BSMV-γ component. Conclusions Our results show that BSMV can be used as a vector for gene silencing in barley roots and in B. distachyon leaves and possibly roots, opening up possibilities for using VIGS to study cereal root biology and to exploit the wealth of genome information in the new cereal model plant B. distachyon. On the other hand, the silencing induced by BSMV in oat seemed too

  8. Physiological responses in barley to applications of lanthanum

    International Nuclear Information System (INIS)

    Reddy, N.; Maheswaran, J.; Peverill, K.; Meehan, B.

    1998-01-01

    Full text: Chinese research and glasshouse investigations carried out in Victoria by the authors have shown that several plant species, when treated with Rare Earth Elements (REEs), retain greater amounts of moisture under water stressed conditions. The physiological adaptation of the plant to retain moisture in response to REE treatment however, has not been investigated. A glasshouse trial is currently in progress to study the physiological and agronomic responses of barley (cv. Schooner) grown in pots to application of lanthanum (0, 5 and 10 kg/ha), at a concentration of 0.05%, under well-watered (field capacity) and water-deficit (25 - 30% field capacity) conditions. Lanthanum was applied both directly to the soil and as a foliar spray. The physiological measurements include, photosynthetic rate, leaf water potential, osmotic potential, relative water content, stomatal conductance and water use efficiency. Measured agronomic parameters include plant height, tiller production, leaf area development, total grain weight, total biomass, root and shoot ratio and harvest index. Analysis of plant tissue for N, P, K, Ca, Mg, Zn and La to study the relationship between application of REE and nutrient uptake is also being carried out. The paper discusses physiological and agronomic changes in barley plants in response to treatment with lanthanum, under conditions of water stress

  9. Deep learning-based fine-grained car make/model classification for visual surveillance

    Science.gov (United States)

    Gundogdu, Erhan; Parıldı, Enes Sinan; Solmaz, Berkan; Yücesoy, Veysel; Koç, Aykut

    2017-10-01

    Fine-grained object recognition is a potential computer vision problem that has been recently addressed by utilizing deep Convolutional Neural Networks (CNNs). Nevertheless, the main disadvantage of classification methods relying on deep CNN models is the need for considerably large amount of data. In addition, there exists relatively less amount of annotated data for a real world application, such as the recognition of car models in a traffic surveillance system. To this end, we mainly concentrate on the classification of fine-grained car make and/or models for visual scenarios by the help of two different domains. First, a large-scale dataset including approximately 900K images is constructed from a website which includes fine-grained car models. According to their labels, a state-of-the-art CNN model is trained on the constructed dataset. The second domain that is dealt with is the set of images collected from a camera integrated to a traffic surveillance system. These images, which are over 260K, are gathered by a special license plate detection method on top of a motion detection algorithm. An appropriately selected size of the image is cropped from the region of interest provided by the detected license plate location. These sets of images and their provided labels for more than 30 classes are employed to fine-tune the CNN model which is already trained on the large scale dataset described above. To fine-tune the network, the last two fully-connected layers are randomly initialized and the remaining layers are fine-tuned in the second dataset. In this work, the transfer of a learned model on a large dataset to a smaller one has been successfully performed by utilizing both the limited annotated data of the traffic field and a large scale dataset with available annotations. Our experimental results both in the validation dataset and the real field show that the proposed methodology performs favorably against the training of the CNN model from scratch.

  10. Community dynamics and metabolite target analysis of spontaneous, backslopped barley sourdough fermentations under laboratory and bakery conditions.

    Science.gov (United States)

    Harth, Henning; Van Kerrebroeck, Simon; De Vuyst, Luc

    2016-07-02

    Barley flour is not commonly used for baking because of its negative effects on bread dough rheology and loaf volume. However, barley sourdoughs are promising ingredients to produce improved barley-based breads. Spontaneous barley sourdough fermentations were performed through backslopping (every 24h, 10days) under laboratory (fermentors, controlled temperature of 30°C, high dough yield of 400) and bakery conditions (open vessels, ambient temperature of 17-22°C, low dough yield of 200), making use of the same batch of flour. They differed in pH evolution, microbial community dynamics, and lactic acid bacteria (LAB) species composition. After ten backsloppings, the barley sourdoughs were characterized by the presence of the LAB species Lactobacillus fermentum, Lactobacillus plantarum, and Lactobacillus brevis in the case of the laboratory productions (fast pH decrease, pHbakery productions (slow pH decrease, pH4.0 after eight backslopping steps). In both sourdough productions, Saccharomyces cerevisiae was the sole yeast species. Breads made with wheat flour supplemented with 20% (on flour basis) barley sourdough displayed a firmer texture, a smaller volume, and an acceptable flavour compared with all wheat-based reference breads. Hence, representative strains of the LAB species mentioned above, adapted to the environmental conditions they will be confronted with, may be selected as starter cultures for the production of stable barley sourdoughs and flavourful breads. Copyright © 2016. Published by Elsevier B.V.

  11. Quality Control System for Beer Developed with Monoclonal Antibodies Specific to Barley Lipid Transfer Protein

    Directory of Open Access Journals (Sweden)

    Yukie Murakami-Yamaguchi

    2012-10-01

    Full Text Available Non-specific lipid transfer protein (LTP in barley grain reacted with the IgE in sera drawn from food allergy patients. A sandwich-type of enzyme-linked immunosorbent assay (ELISA was developed with mouse monoclonal antibodies raised against LTP purified with barley flour. This ELISA showed a practical working range of 0.3–3 ng/mL and no cross-reactivity with wheat, adlay and rye. Using this ELISA, LTP was determined in several types of barley-foods, including fermented foods such as malt vinegar, barley-malt miso and beer. LTP content in beer of the same kind was approximately constant, even if manufacturing factory and production days were different. Not only as a factor of foam formation and stability but also as an allergen, controlling and monitoring of LTP in beer should be considered. Taken together, our LTP-detecting ELISA can be proposed as an appropriate system for the quality control of beer.

  12. Simulation and Experimental Studies on Grain Selection and Structure Design of the Spiral Selector for Casting Single Crystal Ni-Based Superalloy

    Directory of Open Access Journals (Sweden)

    Hang Zhang

    2017-10-01

    Full Text Available Grain selection is an important process in single crystal turbine blades manufacturing. Selector structure is a control factor of grain selection, as well as directional solidification (DS. In this study, the grain selection and structure design of the spiral selector were investigated through experimentation and simulation. A heat transfer model and a 3D microstructure growth model were established based on the Cellular automaton-Finite difference (CA-FD method for the grain selector. Consequently, the temperature field, the microstructure and the grain orientation distribution were simulated and further verified. The average error of the temperature result was less than 1.5%. The grain selection mechanisms were further analyzed and validated through simulations. The structural design specifications of the selector were suggested based on the two grain selection effects. The structural parameters of the spiral selector, namely, the spiral tunnel diameter (dw, the spiral pitch (hb and the spiral diameter (hs, were studied and the design criteria of these parameters were proposed. The experimental and simulation results demonstrated that the improved selector could accurately and efficiently produce a single crystal structure.

  13. Simulation and Experimental Studies on Grain Selection and Structure Design of the Spiral Selector for Casting Single Crystal Ni-Based Superalloy.

    Science.gov (United States)

    Zhang, Hang; Xu, Qingyan

    2017-10-27

    Grain selection is an important process in single crystal turbine blades manufacturing. Selector structure is a control factor of grain selection, as well as directional solidification (DS). In this study, the grain selection and structure design of the spiral selector were investigated through experimentation and simulation. A heat transfer model and a 3D microstructure growth model were established based on the Cellular automaton-Finite difference (CA-FD) method for the grain selector. Consequently, the temperature field, the microstructure and the grain orientation distribution were simulated and further verified. The average error of the temperature result was less than 1.5%. The grain selection mechanisms were further analyzed and validated through simulations. The structural design specifications of the selector were suggested based on the two grain selection effects. The structural parameters of the spiral selector, namely, the spiral tunnel diameter ( d w ), the spiral pitch ( h b ) and the spiral diameter ( h s ), were studied and the design criteria of these parameters were proposed. The experimental and simulation results demonstrated that the improved selector could accurately and efficiently produce a single crystal structure.

  14. Small grain size zirconium-based coatings deposited by magnetron sputtering at low temperatures

    Energy Technology Data Exchange (ETDEWEB)

    Jimenez, O., E-mail: omar.jimenez.udg@gmail.com [Departamento de Ingeniería de Proyectos, CUCEI, Universidad de Guadalajara, AP 307, CP 45101 Zapopan, Jal (Mexico); Department of Materials Science and Engineering, The University of Sheffield, Sheffield S1 3JD (United Kingdom); Audronis, M.; Leyland, A. [Department of Materials Science and Engineering, The University of Sheffield, Sheffield S1 3JD (United Kingdom); Flores, M.; Rodriguez, E. [Departamento de Ingeniería de Proyectos, CUCEI, Universidad de Guadalajara, AP 307, CP 45101 Zapopan, Jal (Mexico); Kanakis, K.; Matthews, A. [Department of Materials Science and Engineering, The University of Sheffield, Sheffield S1 3JD (United Kingdom)

    2015-09-30

    Hard, partly amorphous, ZrTiB(N) coatings were deposited by Physical Vapour Deposition (PVD) onto (111) silicon wafers at low substrate temperatures of 85 and 110 °C using Closed Field Unbalanced Magnetron Sputtering. A segmented rectangular sputter target composed of three pieces (Zr/TiB{sub 2}/Zr) was used as the source of evaporation of coating components. Two different substrate biases (i.e. floating potential and − 50 V) and N{sub 2} reactive-gas flow rates of 2, 4 and 6 sccm were employed as the main deposition parameter variables. The chemical composition, structure, morphology and mechanical properties were investigated using a variety of analytical techniques such as Glow-Discharge Optical Emission Spectroscopy, cross-sectional Scanning Electron Microscopy (SEM), Glancing Angle X-ray Diffraction (GAXRD) and nanoindentation. With other parameters fixed, coating properties were found to be dependent on the substrate negative bias and nitrogen flow rate. Linear scan profiles and SEM imaging revealed that all coatings were smooth, dense and featureless (in fracture cross section) with no apparent columnar morphology or macro-defects. GAXRD structural analysis revealed that mostly metallic phases were formed for coatings containing no nitrogen, whereas a solid solution (Zr,Ti)N single phase nitride was found in most of the reactively deposited coatings — exhibiting a very small grain size due to nitrogen and boron grain refinement effects. Hardness values from as low as 8.6 GPa up to a maximum of 25.9 GPa are related mainly to solid solution strengthening effects. The measured elastic moduli correlated with the trends in hardness behaviour; values in the range of 120–200 GPa were observed depending on the selected deposition parameters. Also, high H/E values (> 0.1) were achieved with several of the coatings.

  15. Web-based computational chemistry education with CHARMMing II: Coarse-grained protein folding.

    Directory of Open Access Journals (Sweden)

    Frank C Pickard

    2014-07-01

    Full Text Available A lesson utilizing a coarse-grained (CG Gō-like model has been implemented into the CHARMM INterface and Graphics (CHARMMing web portal (www.charmming.org to the Chemistry at HARvard Macromolecular Mechanics (CHARMM molecular simulation package. While widely used to model various biophysical processes, such as protein folding and aggregation, CG models can also serve as an educational tool because they can provide qualitative descriptions of complex biophysical phenomena for a relatively cheap computational cost. As a proof of concept, this lesson demonstrates the construction of a CG model of a small globular protein, its simulation via Langevin dynamics, and the analysis of the resulting data. This lesson makes connections between modern molecular simulation techniques and topics commonly presented in an advanced undergraduate lecture on physical chemistry. It culminates in a straightforward analysis of a short dynamics trajectory of a small fast folding globular protein; we briefly describe the thermodynamic properties that can be calculated from this analysis. The assumptions inherent in the model and the data analysis are laid out in a clear, concise manner, and the techniques used are consistent with those employed by specialists in the field of CG modeling. One of the major tasks in building the Gō-like model is determining the relative strength of the nonbonded interactions between coarse-grained sites. New functionality has been added to CHARMMing to facilitate this process. The implementation of these features into CHARMMing helps automate many of the tedious aspects of constructing a CG Gō model. The CG model builder and its accompanying lesson should be a valuable tool to chemistry students, teachers, and modelers in the field.

  16. Small grain size zirconium-based coatings deposited by magnetron sputtering at low temperatures

    International Nuclear Information System (INIS)

    Jimenez, O.; Audronis, M.; Leyland, A.; Flores, M.; Rodriguez, E.; Kanakis, K.; Matthews, A.

    2015-01-01

    Hard, partly amorphous, ZrTiB(N) coatings were deposited by Physical Vapour Deposition (PVD) onto (111) silicon wafers at low substrate temperatures of 85 and 110 °C using Closed Field Unbalanced Magnetron Sputtering. A segmented rectangular sputter target composed of three pieces (Zr/TiB 2 /Zr) was used as the source of evaporation of coating components. Two different substrate biases (i.e. floating potential and − 50 V) and N 2 reactive-gas flow rates of 2, 4 and 6 sccm were employed as the main deposition parameter variables. The chemical composition, structure, morphology and mechanical properties were investigated using a variety of analytical techniques such as Glow-Discharge Optical Emission Spectroscopy, cross-sectional Scanning Electron Microscopy (SEM), Glancing Angle X-ray Diffraction (GAXRD) and nanoindentation. With other parameters fixed, coating properties were found to be dependent on the substrate negative bias and nitrogen flow rate. Linear scan profiles and SEM imaging revealed that all coatings were smooth, dense and featureless (in fracture cross section) with no apparent columnar morphology or macro-defects. GAXRD structural analysis revealed that mostly metallic phases were formed for coatings containing no nitrogen, whereas a solid solution (Zr,Ti)N single phase nitride was found in most of the reactively deposited coatings — exhibiting a very small grain size due to nitrogen and boron grain refinement effects. Hardness values from as low as 8.6 GPa up to a maximum of 25.9 GPa are related mainly to solid solution strengthening effects. The measured elastic moduli correlated with the trends in hardness behaviour; values in the range of 120–200 GPa were observed depending on the selected deposition parameters. Also, high H/E values (> 0.1) were achieved with several of the coatings.

  17. Phytochemical Pharmacokinetics and Bioactivity of Oat and Barley Flour: A Randomized Crossover Trial

    Directory of Open Access Journals (Sweden)

    Caleigh M. Sawicki

    2016-12-01

    Full Text Available While dietary fiber plays an important role in the health benefits associated with whole grain consumption, other ingredients concentrated in the outer bran layer, including alkylresorcinols, lignans, phenolic acids, phytosterols, and tocols, may also contribute to these outcomes. To determine the acute bioavailability and pharmacokinetics of the major phytochemicals found in barley and oats, we conducted a randomized, three-way crossover trial in 13 healthy subjects, aged 40–70 years with a body mass index (BMI of 27–35.9 kg/m2. After a two-day run-in period following a diet low in phytochemicals, subjects were randomized to receive muffins made with either 48 g whole oat flour, whole barley flour, or refined wheat flour plus cellulose (control, with a one-week washout period between each intervention. At the same time, an oral glucose tolerance test was administered. In addition to plasma phytochemical concentrations, glucose and insulin responses, biomarkers of antioxidant activity, lipid peroxidation, inflammation, and vascular remodeling were determined over a 24-h period. There was no significant effect on acute bioavailability or pharmacokinetics of major phytochemicals. Administered concurrently with a glucose bolus, the source of whole grains did not attenuate the post-prandial response of markers of glucoregulation and insulin sensitivity, inflammation, nor vascular remodeling compared to the refined grain control. No significant differences were observed in the bioavailability or postprandial effects between whole-oat and whole-barley compared to a refined wheat control when administered with a glucose challenge. These null results may be due, in part, to the inclusion criteria for the subjects, dose of the whole grains, and concurrent acute administration of the whole grains with the glucose bolus.

  18. Microdochium nivale and Microdochium majus in seed samples of Danish small grain cereals

    DEFF Research Database (Denmark)

    Nielsen, L. K.; Justesen, A. F.; Jensen, J. D.

    2013-01-01

    Microdochium nivale and Microdochium majus are two of fungal species found in the Fusarium Head Blight (FHB) complex infecting small grain cereals. Quantitative real-time PCR assays were designed to separate the two Microdochium species based on the translation elongation factor 1a gene (TEF-1a...... in selected wheat samples from 2003 to 2007, selected barley samples from 2007 as well as in historical samples from 1957 to 2000 using CAPS analysis to detect the G143A substitution. The results confirm strobilurin resistance from 2003 in the Microdochium populations of wheat and also confirmed resistance...

  19. Roles of Hydroxynitrile Glucosides in Barley

    DEFF Research Database (Denmark)

    Roelsgaard, Pernille Sølvhøj

    Plants produce an impressive variety of bioactive natural products involved in defense, insect attraction and signaling. These compounds enable the plant to defend itself, communicate with the surroundings and survive in an environment with constant challenges and attackers. This study has focused...... that hydroxynitrile glucosides can act as carbohydrate and nitrogen storage compounds and as reactive oxygen species (ROS) quenching compounds. A positive correlation between the hydroxynitrile glucoside content in barley and susceptibility toward the barley powdery mildew fungus (Blumeria graminis f.sp. hordei, Bgh...... to regulate defense related genes in maize. Barley plants that are gene-silenced in the first step of hydroxynitrile glucoside biosynthesis have been generated to further investigate these results. It appears that hydroxynitrile glucosides in barley have a dual role; up to a certain level Bgh profits from...

  20. SPRING BARLEY BREEDING FOR MALTING QUALITY

    Directory of Open Access Journals (Sweden)

    Alžbeta Žofajová

    2010-05-01

    Full Text Available The aim of this contribution is to illustrate the results of spring barley breeding for malting quality and point out an important position of variety in production of  qualitative  raw material for maltinq and beer  industry as well as the system of evaluation the qualitative parameters of breeding materials and adaptation of barley breeding programms to the  new requirements of  malting and beer industry. As an example of the results obtained most recently description is made of the Ezer, Levan, Donaris, Sladar spring barley varieties with very good malting quality and effective resistance to  powdery mildew.  Cultivation of these varieties  and malting barley production with  reduced use  of pesticidies is environmentally friedly alternative. doi:10.5219/50