ANALYSIS OF EXISTING AND PROSPECTIVE TECHNICAL CONTROL SYSTEMS OF NUMERIC CODES AUTOMATIC BLOCKING

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A. M. Beznarytnyy

2013-09-01

Full Text Available Purpose. To identify the characteristic features of the engineering control measures system of automatic block of numeric code, identifying their advantages and disadvantages, to analyze the possibility of their use in the problems of diagnosing status of the devices automatic block and setting targets for the development of new diagnostic systems. Methodology. In order to achieve targets the objective theoretical and analytical method and the method of functional analysis have been used. Findings. The analysis of existing and future facilities of the remote control and diagnostics automatic block devices had shown that the existing systems of diagnosis were not sufficiently informative, designed primarily to control the discrete parameters, which in turn did not allow them to construct a decision support subsystem. In developing of new systems of technical diagnostics it was proposed to use the principle of centralized distributed processing of diagnostic data, to include a subsystem support decision-making in to the diagnostics system, it will reduce the amount of work to maintain the devices blocking and reduce recovery time after the occurrence injury. Originality. As a result, the currently existing engineering controls facilities of automatic block can not provide a full assessment of the state distillation alarms and locks. Criteria for the development of new systems of technical diagnostics with increasing amounts of diagnostic information and its automatic analysis were proposed. Practical value. These results of the analysis can be used in practice in order to select the technical control of automatic block devices, as well as the further development of diagnostic systems automatic block that allows for a gradual transition from a planned preventive maintenance service model to the actual state of the monitored devices.

A solution for automatic parallelization of sequential assembly code

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Kovačević Đorđe

2013-01-01

Full Text Available Since modern multicore processors can execute existing sequential programs only on a single core, there is a strong need for automatic parallelization of program code. Relying on existing algorithms, this paper describes one new software solution tool for parallelization of sequential assembly code. The main goal of this paper is to develop the parallelizator which reads sequential assembler code and at the output provides parallelized code for MIPS processor with multiple cores. The idea is the following: the parser translates assembler input file to program objects suitable for further processing. After that the static single assignment is done. Based on the data flow graph, the parallelization algorithm separates instructions on different cores. Once sequential code is parallelized by the parallelization algorithm, registers are allocated with the algorithm for linear allocation, and the result at the end of the program is distributed assembler code on each of the cores. In the paper we evaluate the speedup of the matrix multiplication example, which was processed by the parallelizator of assembly code. The result is almost linear speedup of code execution, which increases with the number of cores. The speed up on the two cores is 1.99, while on 16 cores the speed up is 13.88.

RETRANS - A tool to verify the functional equivalence of automatically generated source code with its specification

International Nuclear Information System (INIS)

Miedl, H.

1998-01-01

Following the competent technical standards (e.g. IEC 880) it is necessary to verify each step in the development process of safety critical software. This holds also for the verification of automatically generated source code. To avoid human errors during this verification step and to limit the cost effort a tool should be used which is developed independently from the development of the code generator. For this purpose ISTec has developed the tool RETRANS which demonstrates the functional equivalence of automatically generated source code with its underlying specification. (author)

Shaping electromagnetic waves using software-automatically-designed metasurfaces.

Science.gov (United States)

Zhang, Qian; Wan, Xiang; Liu, Shuo; Yuan Yin, Jia; Zhang, Lei; Jun Cui, Tie

2017-06-15

We present a fully digital procedure of designing reflective coding metasurfaces to shape reflected electromagnetic waves. The design procedure is completely automatic, controlled by a personal computer. In details, the macro coding units of metasurface are automatically divided into several types (e.g. two types for 1-bit coding, four types for 2-bit coding, etc.), and each type of the macro coding units is formed by discretely random arrangement of micro coding units. By combining an optimization algorithm and commercial electromagnetic software, the digital patterns of the macro coding units are optimized to possess constant phase difference for the reflected waves. The apertures of the designed reflective metasurfaces are formed by arranging the macro coding units with certain coding sequence. To experimentally verify the performance, a coding metasurface is fabricated by automatically designing two digital 1-bit unit cells, which are arranged in array to constitute a periodic coding metasurface to generate the required four-beam radiations with specific directions. Two complicated functional metasurfaces with circularly- and elliptically-shaped radiation beams are realized by automatically designing 4-bit macro coding units, showing excellent performance of the automatic designs by software. The proposed method provides a smart tool to realize various functional devices and systems automatically.

Using Automatic Code Generation in the Attitude Control Flight Software Engineering Process

Science.gov (United States)

McComas, David; O'Donnell, James R., Jr.; Andrews, Stephen F.

1999-01-01

This paper presents an overview of the attitude control subsystem flight software development process, identifies how the process has changed due to automatic code generation, analyzes each software development phase in detail, and concludes with a summary of our lessons learned.

Automatic differentiation of functions

International Nuclear Information System (INIS)

Douglas, S.R.

1990-06-01

Automatic differentiation is a method of computing derivatives of functions to any order in any number of variables. The functions must be expressible as combinations of elementary functions. When evaluated at specific numerical points, the derivatives have no truncation error and are automatically found. The method is illustrated by simple examples. Source code in FORTRAN is provided

A method for modeling co-occurrence propensity of clinical codes with application to ICD-10-PCS auto-coding.

Science.gov (United States)

Subotin, Michael; Davis, Anthony R

2016-09-01

Natural language processing methods for medical auto-coding, or automatic generation of medical billing codes from electronic health records, generally assign each code independently of the others. They may thus assign codes for closely related procedures or diagnoses to the same document, even when they do not tend to occur together in practice, simply because the right choice can be difficult to infer from the clinical narrative. We propose a method that injects awareness of the propensities for code co-occurrence into this process. First, a model is trained to estimate the conditional probability that one code is assigned by a human coder, given than another code is known to have been assigned to the same document. Then, at runtime, an iterative algorithm is used to apply this model to the output of an existing statistical auto-coder to modify the confidence scores of the codes. We tested this method in combination with a primary auto-coder for International Statistical Classification of Diseases-10 procedure codes, achieving a 12% relative improvement in F-score over the primary auto-coder baseline. The proposed method can be used, with appropriate features, in combination with any auto-coder that generates codes with different levels of confidence. The promising results obtained for International Statistical Classification of Diseases-10 procedure codes suggest that the proposed method may have wider applications in auto-coding. © The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

An Efficient Platform for the Automatic Extraction of Patterns in Native Code

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Javier Escalada

2017-01-01

Full Text Available Different software tools, such as decompilers, code quality analyzers, recognizers of packed executable files, authorship analyzers, and malware detectors, search for patterns in binary code. The use of machine learning algorithms, trained with programs taken from the huge number of applications in the existing open source code repositories, allows finding patterns not detected with the manual approach. To this end, we have created a versatile platform for the automatic extraction of patterns from native code, capable of processing big binary files. Its implementation has been parallelized, providing important runtime performance benefits for multicore architectures. Compared to the single-processor execution, the average performance improvement obtained with the best configuration is 3.5 factors over the maximum theoretical gain of 4 factors.

Automatic ID heat load generation in ANSYS code

International Nuclear Information System (INIS)

Wang, Zhibi.

1992-01-01

Detailed power density profiles are critical in the execution of a thermal analysis using a finite element (FE) code such as ANSYS. Unfortunately, as yet there is no easy way to directly input the precise power profiles into ANSYS. A straight-forward way to do this is to hand-calculate the power of each node or element and then type the data into the code. Every time a change is made to the FE model, the data must be recalculated and reentered. One way to solve this problem is to generate a set of discrete data, using another code such as PHOTON2, and curve-fit the data. Using curve-fitted formulae has several disadvantages. It is time consuming because of the need to run a second code for generation of the data, curve-fitting, and doing the data check, etc. Additionally, because there is no generality for different beamlines or different parameters, the above work must be repeated for each case. And, errors in the power profiles due to curve-fitting result in errors in the analysis. To solve the problem once and for all and with the capability to apply to any insertion device (ID), a program for ED power profile was written in ANSYS Parametric Design Language (APDL). This program is implemented as an ANSYS command with input parameters of peak magnetic field, deflection parameter, length of ID, and distance from the source. Once the command is issued, all the heat load will be automatically generated by the code

ASA24 enables multiple automatically coded self-administered 24-hour recalls and food records

Science.gov (United States)

A freely available web-based tool for epidemiologic, interventional, behavioral, or clinical research from NCI that enables multiple automatically coded self-administered 24-hour recalls and food records.

Automatic choroid cells segmentation and counting based on approximate convexity and concavity of chain code in fluorescence microscopic image

Science.gov (United States)

Lu, Weihua; Chen, Xinjian; Zhu, Weifang; Yang, Lei; Cao, Zhaoyuan; Chen, Haoyu

2015-03-01

In this paper, we proposed a method based on the Freeman chain code to segment and count rhesus choroid-retinal vascular endothelial cells (RF/6A) automatically for fluorescence microscopy images. The proposed method consists of four main steps. First, a threshold filter and morphological transform were applied to reduce the noise. Second, the boundary information was used to generate the Freeman chain codes. Third, the concave points were found based on the relationship between the difference of the chain code and the curvature. Finally, cells segmentation and counting were completed based on the characteristics of the number of the concave points, the area and shape of the cells. The proposed method was tested on 100 fluorescence microscopic cell images, and the average true positive rate (TPR) is 98.13% and the average false positive rate (FPR) is 4.47%, respectively. The preliminary results showed the feasibility and efficiency of the proposed method.

CERPI and CEREL, two computer codes for the automatic identification and determination of gamma emitters in thermal-neutron-activated samples

International Nuclear Information System (INIS)

Giannini, M.; Oliva, P.R.; Ramorino, M.C.

1979-01-01

A computer code that automatically analyzes gamma-ray spectra obtained with Ge(Li) detectors is described. The program contains such features as automatic peak location and fitting, determination of peak energies and intensities, nuclide identification, and calculation of masses and errors. Finally, the results obtained with this computer code for a lunar sample are reported and briefly discussed

Methods for Ensuring High Quality of Coding of Cause of Death. The Mortality Register to Follow Southern Urals Populations Exposed to Radiation.

Science.gov (United States)

Startsev, N; Dimov, P; Grosche, B; Tretyakov, F; Schüz, J; Akleyev, A

2015-01-01

To follow up populations exposed to several radiation accidents in the Southern Urals, a cause-of-death registry was established at the Urals Center capturing deaths in the Chelyabinsk, Kurgan and Sverdlovsk region since 1950. When registering deaths over such a long time period, quality measures need to be in place to maintain quality and reduce the impact of individual coders as well as quality changes in death certificates. To ensure the uniformity of coding, a method for semi-automatic coding was developed, which is described here. Briefly, the method is based on a dynamic thesaurus, database-supported coding and parallel coding by two different individuals. A comparison of the proposed method for organizing the coding process with the common procedure of coding showed good agreement, with, at the end of the coding process, 70  - 90% agreement for the three-digit ICD -9 rubrics. The semi-automatic method ensures a sufficiently high quality of coding by at the same time providing an opportunity to reduce the labor intensity inherent in the creation of large-volume cause-of-death registries.

CERPI and CEREL, two computer codes for the automatic identification and determination of gamma emitters in thermal neutron activated samples

International Nuclear Information System (INIS)

Giannini, M.; Oliva, P.R.; Ramorino, C.

1978-01-01

A description is given of a computer code which automatically analyses gamma-ray spectra obtained with Ge(Li) detectors. The program contains features as automatic peak location and fitting, determination of peak energies and intensities, nuclide identification and calculation of masses and errors. Finally the results obtained with our computer code for a lunar sample are reported and briefly discussed

AutoBayes/CC: Combining Program Synthesis with Automatic Code Certification: System Description

Science.gov (United States)

Whalen, Michael; Schumann, Johann; Fischer, Bernd; Clancy, Daniel (Technical Monitor)

2002-01-01

Code certification is a lightweight approach to formally demonstrate software quality. It concentrates on aspects of software quality that can be defined and formalized via properties, e.g., operator safety or memory safety. Its basic idea is to require code producers to provide formal proofs that their code satisfies these quality properties. The proofs serve as certificates which can be checked independently, by the code consumer or by certification authorities, e.g., the FAA. It is the idea underlying such approaches as proof-carrying code [6]. Code certification can be viewed as a more practical version of traditional Hoare-style program verification. The properties to be verified are fairly simple and regular so that it is often possible to use an automated theorem prover to automatically discharge all emerging proof obligations. Usually, however, the programmer must still splice auxiliary annotations (e.g., loop invariants) into the program to facilitate the proofs. For complex properties or larger programs this quickly becomes the limiting factor for the applicability of current certification approaches.

Automatic Residential/Commercial Classification of Parcels with Solar Panel Detections

Energy Technology Data Exchange (ETDEWEB)

2018-03-25

A computational method to automatically detect solar panels on rooftops to aid policy and financial assessment of solar distributed generation. The code automatically classifies parcels containing solar panels in the U.S. as residential or commercial. The code allows the user to specify an input dataset containing parcels and detected solar panels, and then uses information about the parcels and solar panels to automatically classify the rooftops as residential or commercial using machine learning techniques. The zip file containing the code includes sample input and output datasets for the Boston and DC areas.

Development of a CAD-based neutron transport code with the method of characteristics

International Nuclear Information System (INIS)

Chen Zhenping; Wang Dianxi; He Tao; Wang Guozhong; Zheng Huaqing

2012-01-01

The main problem determining whether the method of characteristics (MOC) can be used in complicated and highly heterogeneous geometry is how to combine an effective geometry processing method with MOC. In this study, a new idea making use of MCAM, which is a Mutlti-Calculation Automatic Modeling for Neutronics and Radiation Transport program developed by FDS Team, for geometry description and ray tracing of particle transport was brought forward to solve the geometry problem mentioned above. Based on the theory and approach as the foregoing statement, a two dimensional neutron transport code was developed which had been integrated into VisualBUS, developed by FDS Team. Several benchmarks were used to verify the validity of the code and the numerical results were coincident with the reference values very well, which indicated the accuracy and feasibility of the method and the MOC code. (authors)

Development of tools for automatic generation of PLC code

CERN Document Server

Koutli, Maria; Rochez, Jacques

This Master thesis was performed at CERN and more specifically in the EN-ICE-PLC section. The Thesis describes the integration of two PLC platforms, that are based on CODESYS development tool, to the CERN defined industrial framework, UNICOS. CODESYS is a development tool for PLC programming, based on IEC 61131-3 standard, and is adopted by many PLC manufacturers. The two PLC development environments are, the SoMachine from Schneider and the TwinCAT from Beckhoff. The two CODESYS compatible PLCs, should be controlled by the SCADA system of Siemens, WinCC OA. The framework includes a library of Function Blocks (objects) for the PLC programs and a software for automatic generation of the PLC code based on this library, called UAB. The integration aimed to give a solution that is shared by both PLC platforms and was based on the PLCOpen XML scheme. The developed tools were demonstrated by creating a control application for both PLC environments and testing of the behavior of the code of the library.

Signal Compression in Automatic Ultrasonic testing of Rails

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Tomasz Ciszewski

2007-01-01

Full Text Available Full recording of the most important information carried by the ultrasonic signals allows realizing statistical analysis of measurement data. Statistical analysis of the results gathered during automatic ultrasonic tests gives data which lead, together with use of features of measuring method, differential lossy coding and traditional method of lossless data compression (Huffman’s coding, dictionary coding, to a comprehensive, efficient data compression algorithm. The subject of the article is to present the algorithm and the benefits got by using it in comparison to alternative compression methods. Storage of large amount  of data allows to create an electronic catalogue of ultrasonic defects. If it is created, the future qualification system training in the new solutions of the automat for test in rails will be possible.

Automatic Parallelization Tool: Classification of Program Code for Parallel Computing

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Mustafa Basthikodi

2016-04-01

Full Text Available Performance growth of single-core processors has come to a halt in the past decade, but was re-enabled by the introduction of parallelism in processors. Multicore frameworks along with Graphical Processing Units empowered to enhance parallelism broadly. Couples of compilers are updated to developing challenges forsynchronization and threading issues. Appropriate program and algorithm classifications will have advantage to a great extent to the group of software engineers to get opportunities for effective parallelization. In present work we investigated current species for classification of algorithms, in that related work on classification is discussed along with the comparison of issues that challenges the classification. The set of algorithms are chosen which matches the structure with different issues and perform given task. We have tested these algorithms utilizing existing automatic species extraction toolsalong with Bones compiler. We have added functionalities to existing tool, providing a more detailed characterization. The contributions of our work include support for pointer arithmetic, conditional and incremental statements, user defined types, constants and mathematical functions. With this, we can retain significant data which is not captured by original speciesof algorithms. We executed new theories into the device, empowering automatic characterization of program code.

Automatic differentiation for gradient-based optimization of radiatively heated microelectronics manufacturing equipment

Energy Technology Data Exchange (ETDEWEB)

Moen, C.D.; Spence, P.A.; Meza, J.C.; Plantenga, T.D.

1996-12-31

Automatic differentiation is applied to the optimal design of microelectronic manufacturing equipment. The performance of nonlinear, least-squares optimization methods is compared between numerical and analytical gradient approaches. The optimization calculations are performed by running large finite-element codes in an object-oriented optimization environment. The Adifor automatic differentiation tool is used to generate analytic derivatives for the finite-element codes. The performance results support previous observations that automatic differentiation becomes beneficial as the number of optimization parameters increases. The increase in speed, relative to numerical differences, has a limited value and results are reported for two different analysis codes.

A proposed metamodel for the implementation of object oriented software through the automatic generation of source code

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CARVALHO, J. S. C.

2008-12-01

Full Text Available During the development of software one of the most visible risks and perhaps the biggest implementation obstacle relates to the time management. All delivery deadlines software versions must be followed, but it is not always possible, sometimes due to delay in coding. This paper presents a metamodel for software implementation, which will rise to a development tool for automatic generation of source code, in order to make any development pattern transparent to the programmer, significantly reducing the time spent in coding artifacts that make up the software.

A Semantic Analysis Method for Scientific and Engineering Code

Science.gov (United States)

Stewart, Mark E. M.

1998-01-01

This paper develops a procedure to statically analyze aspects of the meaning or semantics of scientific and engineering code. The analysis involves adding semantic declarations to a user's code and parsing this semantic knowledge with the original code using multiple expert parsers. These semantic parsers are designed to recognize formulae in different disciplines including physical and mathematical formulae and geometrical position in a numerical scheme. In practice, a user would submit code with semantic declarations of primitive variables to the analysis procedure, and its semantic parsers would automatically recognize and document some static, semantic concepts and locate some program semantic errors. A prototype implementation of this analysis procedure is demonstrated. Further, the relationship between the fundamental algebraic manipulations of equations and the parsing of expressions is explained. This ability to locate some semantic errors and document semantic concepts in scientific and engineering code should reduce the time, risk, and effort of developing and using these codes.

FAST PALMPRINT AUTHENTICATION BY SOBEL CODE METHOD

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Jyoti Malik

2011-05-01

Full Text Available The ideal real time personal authentication system should be fast and accurate to automatically identify a person’s identity. In this paper, we have proposed a palmprint based biometric authentication method with improvement in time and accuracy, so as to make it a real time palmprint authentication system. Several edge detection methods, wavelet transform, phase congruency etc. are available to extract line feature from the palmprint. In this paper, Multi-scale Sobel Code operators of different orientations (0?, 45?, 90?, and 135? are applied to the palmprint to extract Sobel-Palmprint features in different direc- tions. The Sobel-Palmprint features extracted are stored in Sobel- Palmprint feature vector and matched using sliding window with Hamming Distance similarity measurement method. The sliding win- dow method is accurate but time taking process. In this paper, we have improved the sliding window method so that the matching time reduces. It is observed that there is 39.36% improvement in matching time. In addition, a Min Max Threshold Range (MMTR method is proposed that helps in increasing overall system accuracy by reducing the False Acceptance Rate (FAR. Experimental results indicate that the MMTR method improves the False Acceptance Rate drastically and improvement in sliding window method reduces the comparison time. The accuracy improvement and matching time improvement leads to proposed real time authentication system.

Automatic trend estimation

CERN Document Server

Vamos¸, C˘alin

2013-01-01

Our book introduces a method to evaluate the accuracy of trend estimation algorithms under conditions similar to those encountered in real time series processing. This method is based on Monte Carlo experiments with artificial time series numerically generated by an original algorithm. The second part of the book contains several automatic algorithms for trend estimation and time series partitioning. The source codes of the computer programs implementing these original automatic algorithms are given in the appendix and will be freely available on the web. The book contains clear statement of the conditions and the approximations under which the algorithms work, as well as the proper interpretation of their results. We illustrate the functioning of the analyzed algorithms by processing time series from astrophysics, finance, biophysics, and paleoclimatology. The numerical experiment method extensively used in our book is already in common use in computational and statistical physics.

Creation of voxel-based models for paediatric dosimetry from automatic segmentation methods

International Nuclear Information System (INIS)

Acosta, O.; Li, R.; Ourselin, S.; Caon, M.

2006-01-01

Full text: The first computational models representing human anatomy were mathematical phantoms, but still far from accurate representations of human body. These models have been used with radiation transport codes (Monte Carlo) to estimate organ doses from radiological procedures. Although new medical imaging techniques have recently allowed the construction of voxel-based models based on the real anatomy, few children models from individual CT or MRI data have been reported [1,3]. For pediatric dosimetry purposes, a large range of voxel models by ages is required since scaling the anatomy from existing models is not sufficiently accurate. The small number of models available arises from the small number of CT or MRI data sets of children available and the long amount of time required to segment the data sets. The existing models have been constructed by manual segmentation slice by slice and using simple thresholding techniques. In medical image segmentation, considerable difficulties appear when applying classical techniques like thresholding or simple edge detection. Until now, any evidence of more accurate or near-automatic methods used in construction of child voxel models exists. We aim to construct a range of pediatric voxel models, integrating automatic or semi-automatic 3D segmentation techniques. In this paper we present the first stage of this work using pediatric CT data.

MEMOPS: data modelling and automatic code generation.

Science.gov (United States)

Fogh, Rasmus H; Boucher, Wayne; Ionides, John M C; Vranken, Wim F; Stevens, Tim J; Laue, Ernest D

2010-03-25

In recent years the amount of biological data has exploded to the point where much useful information can only be extracted by complex computational analyses. Such analyses are greatly facilitated by metadata standards, both in terms of the ability to compare data originating from different sources, and in terms of exchanging data in standard forms, e.g. when running processes on a distributed computing infrastructure. However, standards thrive on stability whereas science tends to constantly move, with new methods being developed and old ones modified. Therefore maintaining both metadata standards, and all the code that is required to make them useful, is a non-trivial problem. Memops is a framework that uses an abstract definition of the metadata (described in UML) to generate internal data structures and subroutine libraries for data access (application programming interfaces--APIs--currently in Python, C and Java) and data storage (in XML files or databases). For the individual project these libraries obviate the need for writing code for input parsing, validity checking or output. Memops also ensures that the code is always internally consistent, massively reducing the need for code reorganisation. Across a scientific domain a Memops-supported data model makes it easier to support complex standards that can capture all the data produced in a scientific area, share them among all programs in a complex software pipeline, and carry them forward to deposition in an archive. The principles behind the Memops generation code will be presented, along with example applications in Nuclear Magnetic Resonance (NMR) spectroscopy and structural biology.

Automatic code generation in practice

DEFF Research Database (Denmark)

Adam, Marian Sorin; Kuhrmann, Marco; Schultz, Ulrik Pagh

2016-01-01

-specific language to specify those requirements and to allow for generating a safety-enforcing layer of code, which is deployed to the robot. The paper at hand reports experiences in practically applying code generation to mobile robots. For two cases, we discuss how we addressed challenges, e.g., regarding weaving......Mobile robots often use a distributed architecture in which software components are deployed to heterogeneous hardware modules. Ensuring the consistency with the designed architecture is a complex task, notably if functional safety requirements have to be fulfilled. We propose to use a domain...... code generation into proprietary development environments and testing of manually written code. We find that a DSL based on the same conceptual model can be used across different kinds of hardware modules, but a significant adaptation effort is required in practical scenarios involving different kinds...

pix2code: Generating Code from a Graphical User Interface Screenshot

OpenAIRE

Beltramelli, Tony

2017-01-01

Transforming a graphical user interface screenshot created by a designer into computer code is a typical task conducted by a developer in order to build customized software, websites, and mobile applications. In this paper, we show that deep learning methods can be leveraged to train a model end-to-end to automatically generate code from a single input image with over 77% of accuracy for three different platforms (i.e. iOS, Android and web-based technologies).

Automatic Morphological Sieving: Comparison between Different Methods, Application to DNA Ploidy Measurements

Directory of Open Access Journals (Sweden)

Christophe Boudry

1999-01-01

Full Text Available The aim of the present study is to propose alternative automatic methods to time consuming interactive sorting of elements for DNA ploidy measurements. One archival brain tumour and two archival breast carcinoma were studied, corresponding to 7120 elements (3764 nuclei, 3356 debris and aggregates. Three automatic classification methods were tested to eliminate debris and aggregates from DNA ploidy measurements (mathematical morphology (MM, multiparametric analysis (MA and neural network (NN. Performances were evaluated by reference to interactive sorting. The results obtained for the three methods concerning the percentage of debris and aggregates automatically removed reach 63, 75 and 85% for MM, MA and NN methods, respectively, with false positive rates of 6, 21 and 25%. Information about DNA ploidy abnormalities were globally preserved after automatic elimination of debris and aggregates by MM and MA methods as opposed to NN method, showing that automatic classification methods can offer alternatives to tedious interactive elimination of debris and aggregates, for DNA ploidy measurements of archival tumours.

Consistency and accuracy of diagnostic cancer codes generated by automated registration: comparison with manual registration

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Codazzi Tiziana

2006-09-01

Full Text Available Abstract Background Automated procedures are increasingly used in cancer registration, and it is important that the data produced are systematically checked for consistency and accuracy. We evaluated an automated procedure for cancer registration adopted by the Lombardy Cancer Registry in 1997, comparing automatically-generated diagnostic codes with those produced manually over one year (1997. Methods The automatically generated cancer cases were produced by Open Registry algorithms. For manual registration, trained staff consulted clinical records, pathology reports and death certificates. The social security code, present and checked in both databases in all cases, was used to match the files in the automatic and manual databases. The cancer cases generated by the two methods were compared by manual revision. Results The automated procedure generated 5027 cases: 2959 (59% were accepted automatically and 2068 (41% were flagged for manual checking. Among the cases accepted automatically, discrepancies in data items (surname, first name, sex and date of birth constituted 8.5% of cases, and discrepancies in the first three digits of the ICD-9 code constituted 1.6%. Among flagged cases, cancers of female genital tract, hematopoietic system, metastatic and ill-defined sites, and oropharynx predominated. The usual reasons were use of specific vs. generic codes, presence of multiple primaries, and use of extranodal vs. nodal codes for lymphomas. The percentage of automatically accepted cases ranged from 83% for breast and thyroid cancers to 13% for metastatic and ill-defined cancer sites. Conclusion Since 59% of cases were accepted automatically and contained relatively few, mostly trivial discrepancies, the automatic procedure is efficient for routine case generation effectively cutting the workload required for routine case checking by this amount. Among cases not accepted automatically, discrepancies were mainly due to variations in coding practice.

Higher-order automatic differentiation of mathematical functions

Science.gov (United States)

Charpentier, Isabelle; Dal Cappello, Claude

2015-04-01

Functions of mathematical physics such as the Bessel functions, the Chebyshev polynomials, the Gauss hypergeometric function and so forth, have practical applications in many scientific domains. On the one hand, differentiation formulas provided in reference books apply to real or complex variables. These do not account for the chain rule. On the other hand, based on the chain rule, the automatic differentiation has become a natural tool in numerical modeling. Nevertheless automatic differentiation tools do not deal with the numerous mathematical functions. This paper describes formulas and provides codes for the higher-order automatic differentiation of mathematical functions. The first method is based on Faà di Bruno's formula that generalizes the chain rule. The second one makes use of the second order differential equation they satisfy. Both methods are exemplified with the aforementioned functions.

A new automatic design method to develop multilayer thin film devices for high power laser applications

International Nuclear Information System (INIS)

Sahoo, N.K.; Apparao, K.V.S.R.

1992-01-01

Optical thin film devices play a major role in many areas of frontier technology like development of various laser systems to the designing of complex and precision optical systems. Design and development of these devices are really challenging when they are meant for high power laser applications. In these cases besides desired optical characteristics, the devices are expected to satisfy a whole range of different needs like high damage threshold, durability etc. In the present work a novel completely automatic design method based on Modified Complex Method has been developed for designing of high power thin film devices. Unlike most of the other methods it does not need any suitable starting design. A quarterwave design is sufficient to start with. If required, it is capable of generating its own starting design. The computer code of the method is very simple to implement. This report discusses this novel automatic design method and presents various practicable output designs generated by it. The relative efficiency of the method along with other powerful methods has been presented while designing a broadband IR antireflection coating. The method is also incorporated with 2D and 3D electric field analysis programmes to produce high damage threshold designs. Some experimental devices developed using such designs are also presented in the report. (author). 36 refs., 41 figs

Contribution to automatic speech recognition. Analysis of the direct acoustical signal. Recognition of isolated words and phoneme identification

International Nuclear Information System (INIS)

Dupeyrat, Benoit

1981-01-01

This report deals with the acoustical-phonetic step of the automatic recognition of the speech. The parameters used are the extrema of the acoustical signal (coded in amplitude and duration). This coding method, the properties of which are described, is simple and well adapted to a digital processing. The quality and the intelligibility of the coded signal after reconstruction are particularly satisfactory. An experiment for the automatic recognition of isolated words has been carried using this coding system. We have designed a filtering algorithm operating on the parameters of the coding. Thus the characteristics of the formants can be derived under certain conditions which are discussed. Using these characteristics the identification of a large part of the phonemes for a given speaker was achieved. Carrying on the studies has required the development of a particular methodology of real time processing which allowed immediate evaluation of the improvement of the programs. Such processing on temporal coding of the acoustical signal is extremely powerful and could represent, used in connection with other methods an efficient tool for the automatic processing of the speech.(author) [fr

Measuring the accuracy of automatic shoeprint recognition methods.

Science.gov (United States)

Luostarinen, Tapio; Lehmussola, Antti

2014-11-01

Shoeprints are an important source of information for criminal investigation. Therefore, an increasing number of automatic shoeprint recognition methods have been proposed for detecting the corresponding shoe models. However, comprehensive comparisons among the methods have not previously been made. In this study, an extensive set of methods proposed in the literature was implemented, and their performance was studied in varying conditions. Three datasets of different quality shoeprints were used, and the methods were evaluated also with partial and rotated prints. The results show clear differences between the algorithms: while the best performing method, based on local image descriptors and RANSAC, provides rather good results with most of the experiments, some methods are almost completely unrobust against any unidealities in the images. Finally, the results demonstrate that there is still a need for extensive research to improve the accuracy of automatic recognition of crime scene prints. © 2014 American Academy of Forensic Sciences.

Method for automatic control rod operation using rule-based control

International Nuclear Information System (INIS)

Kinoshita, Mitsuo; Yamada, Naoyuki; Kiguchi, Takashi

1988-01-01

An automatic control rod operation method using rule-based control is proposed. Its features are as follows: (1) a production system to recognize plant events, determine control actions and realize fast inference (fast selection of a suitable production rule), (2) use of the fuzzy control technique to determine quantitative control variables. The method's performance was evaluated by simulation tests on automatic control rod operation at a BWR plant start-up. The results were as follows; (1) The performance which is related to stabilization of controlled variables and time required for reactor start-up, was superior to that of other methods such as PID control and program control methods, (2) the process time to select and interpret the suitable production rule, which was the same as required for event recognition or determination of control action, was short (below 1 s) enough for real time control. The results showed that the method is effective for automatic control rod operation. (author)

Development of an object oriented nodal code using the refined AFEN derived from the method of component decomposition

International Nuclear Information System (INIS)

Noh, J. M.; Yoo, J. W.; Joo, H. K.

2004-01-01

In this study, we invented a method of component decomposition to derive the systematic inter-nodal coupled equations of the refined AFEN method and developed an object oriented nodal code to solve the derived coupled equations. The method of component decomposition decomposes the intra-nodal flux expansion of a nodal method into even and odd components in three dimensions to reduce the large coupled linear system equation into several small single equations. This method requires no additional technique to accelerate the iteration process to solve the inter-nodal coupled equations, since the derived equations can automatically act as the coarse mesh re-balance equations. By utilizing the object oriented programming concepts such as abstraction, encapsulation, inheritance and polymorphism, dynamic memory allocation, and operator overloading, we developed an object oriented nodal code that can facilitate the input/output and the dynamic control of the memories, and can make the maintenance easy. (authors)

SPQR: a Monte Carlo reactor kinetics code

International Nuclear Information System (INIS)

Cramer, S.N.; Dodds, H.L.

1980-02-01

The SPQR Monte Carlo code has been developed to analyze fast reactor core accident problems where conventional methods are considered inadequate. The code is based on the adiabatic approximation of the quasi-static method. This initial version contains no automatic material motion or feedback. An existing Monte Carlo code is used to calculate the shape functions and the integral quantities needed in the kinetics module. Several sample problems have been devised and analyzed. Due to the large statistical uncertainty associated with the calculation of reactivity in accident simulations, the results, especially at later times, differ greatly from deterministic methods. It was also found that in large uncoupled systems, the Monte Carlo method has difficulty in handling asymmetric perturbations

Automatic contact in DYNA3D for vehicle crashworthiness

International Nuclear Information System (INIS)

Whirley, R.G.; Engelmann, B.E.

1994-01-01

This paper presents a new formulation for the automatic definition and treatment of mechanical contact in explicit, nonlinear, finite element analysis. Automatic contact offers the benefits of significantly reduced model construction time and fewer opportunities for user error, but faces significant challenges in reliability and computational costs. The authors have used a new four-step automatic contact algorithm. Key aspects of the proposed method include (1) automatic identification of adjacent and opposite surfaces in the global search phase, and (2) the use of a smoothly varying surface normal that allows a consistent treatment of shell intersection and corner contact conditions without ad hoc rules. Three examples are given to illustrate the performance of the newly proposed algorithm in the public DYNA3D code

Design and construction of a graphical interface for automatic generation of simulation code GEANT4

International Nuclear Information System (INIS)

Driss, Mozher; Bouzaine Ismail

2007-01-01

This work is set in the context of the engineering studies final project; it is accomplished in the center of nuclear sciences and technologies in Sidi Thabet. This project is about conceiving and developing a system based on graphical user interface which allows an automatic codes generation for simulation under the GEANT4 engine. This system aims to facilitate the use of GEANT4 by scientific not necessary expert in this engine and to be used in different areas: research, industry and education. The implementation of this project uses Root library and several programming languages such as XML and XSL. (Author). 5 refs

A new method for species identification via protein-coding and non-coding DNA barcodes by combining machine learning with bioinformatic methods.

Science.gov (United States)

Zhang, Ai-bing; Feng, Jie; Ward, Robert D; Wan, Ping; Gao, Qiang; Wu, Jun; Zhao, Wei-zhong

2012-01-01

Species identification via DNA barcodes is contributing greatly to current bioinventory efforts. The initial, and widely accepted, proposal was to use the protein-coding cytochrome c oxidase subunit I (COI) region as the standard barcode for animals, but recently non-coding internal transcribed spacer (ITS) genes have been proposed as candidate barcodes for both animals and plants. However, achieving a robust alignment for non-coding regions can be problematic. Here we propose two new methods (DV-RBF and FJ-RBF) to address this issue for species assignment by both coding and non-coding sequences that take advantage of the power of machine learning and bioinformatics. We demonstrate the value of the new methods with four empirical datasets, two representing typical protein-coding COI barcode datasets (neotropical bats and marine fish) and two representing non-coding ITS barcodes (rust fungi and brown algae). Using two random sub-sampling approaches, we demonstrate that the new methods significantly outperformed existing Neighbor-joining (NJ) and Maximum likelihood (ML) methods for both coding and non-coding barcodes when there was complete species coverage in the reference dataset. The new methods also out-performed NJ and ML methods for non-coding sequences in circumstances of potentially incomplete species coverage, although then the NJ and ML methods performed slightly better than the new methods for protein-coding barcodes. A 100% success rate of species identification was achieved with the two new methods for 4,122 bat queries and 5,134 fish queries using COI barcodes, with 95% confidence intervals (CI) of 99.75-100%. The new methods also obtained a 96.29% success rate (95%CI: 91.62-98.40%) for 484 rust fungi queries and a 98.50% success rate (95%CI: 96.60-99.37%) for 1094 brown algae queries, both using ITS barcodes.

A new method for species identification via protein-coding and non-coding DNA barcodes by combining machine learning with bioinformatic methods.

Directory of Open Access Journals (Sweden)

Ai-bing Zhang

Full Text Available Species identification via DNA barcodes is contributing greatly to current bioinventory efforts. The initial, and widely accepted, proposal was to use the protein-coding cytochrome c oxidase subunit I (COI region as the standard barcode for animals, but recently non-coding internal transcribed spacer (ITS genes have been proposed as candidate barcodes for both animals and plants. However, achieving a robust alignment for non-coding regions can be problematic. Here we propose two new methods (DV-RBF and FJ-RBF to address this issue for species assignment by both coding and non-coding sequences that take advantage of the power of machine learning and bioinformatics. We demonstrate the value of the new methods with four empirical datasets, two representing typical protein-coding COI barcode datasets (neotropical bats and marine fish and two representing non-coding ITS barcodes (rust fungi and brown algae. Using two random sub-sampling approaches, we demonstrate that the new methods significantly outperformed existing Neighbor-joining (NJ and Maximum likelihood (ML methods for both coding and non-coding barcodes when there was complete species coverage in the reference dataset. The new methods also out-performed NJ and ML methods for non-coding sequences in circumstances of potentially incomplete species coverage, although then the NJ and ML methods performed slightly better than the new methods for protein-coding barcodes. A 100% success rate of species identification was achieved with the two new methods for 4,122 bat queries and 5,134 fish queries using COI barcodes, with 95% confidence intervals (CI of 99.75-100%. The new methods also obtained a 96.29% success rate (95%CI: 91.62-98.40% for 484 rust fungi queries and a 98.50% success rate (95%CI: 96.60-99.37% for 1094 brown algae queries, both using ITS barcodes.

Automatic Annotation Method on Learners' Opinions in Case Method Discussion

Science.gov (United States)

Samejima, Masaki; Hisakane, Daichi; Komoda, Norihisa

2015-01-01

Purpose: The purpose of this paper is to annotate an attribute of a problem, a solution or no annotation on learners' opinions automatically for supporting the learners' discussion without a facilitator. The case method aims at discussing problems and solutions in a target case. However, the learners miss discussing some of problems and solutions.…

Automatic dipole subtraction

International Nuclear Information System (INIS)

Hasegawa, K.

2008-01-01

The Catani-Seymour dipole subtraction is a general procedure to treat infrared divergences in real emission processes at next-to-leading order in QCD. We automatized the procedure in a computer code. The code is useful especially for the processes with many parton legs. In this talk, we first explain the algorithm of the dipole subtraction and the whole structure of our code. After that we show the results for some processes where the infrared divergences of real emission processes are subtracted. (author)

Gene-Auto: Automatic Software Code Generation for Real-Time Embedded Systems

Science.gov (United States)

Rugina, A.-E.; Thomas, D.; Olive, X.; Veran, G.

2008-08-01

This paper gives an overview of the Gene-Auto ITEA European project, which aims at building a qualified C code generator from mathematical models under Matlab-Simulink and Scilab-Scicos. The project is driven by major European industry partners, active in the real-time embedded systems domains. The Gene- Auto code generator will significantly improve the current development processes in such domains by shortening the time to market and by guaranteeing the quality of the generated code through the use of formal methods. The first version of the Gene-Auto code generator has already been released and has gone thought a validation phase on real-life case studies defined by each project partner. The validation results are taken into account in the implementation of the second version of the code generator. The partners aim at introducing the Gene-Auto results into industrial development by 2010.

Development of 3-dimensional neutronics kinetics analysis code for CANDU-PHWR

International Nuclear Information System (INIS)

Kim, M. W.; Kim, C. H.; Hong, I. S.

2005-02-01

The followings are the major contents and scope of the research : development of kinetics power calculation module, formulation of space-dependent neutron transient analysis - implementation of 3-D and 2-G unified nodal method, verification of the kinetics module by benchmark problem - 3-D PHWR kinetics benchmark problem suggested by AECL, reactor trip simulation by shutdown system 1 in Wolsong unit 2. Development of a dynamic linked library code, SCAN D LL, for the coupled calculation with RELAP-CANDU : modeling of shutdown system 1, development of automatic shutdown module - automatic trip module based on rate log power control logic, automatic insertion of shutdown system 1. Development of a link code for coupled calculation - development of SCAN D LL(windows version), verification of coupled code by - 40% reactor inlet header break LOCA power pulse, 100% reactor outlet header break LOCA power pulse, 50% pump suction break LOCA power pulse

Reliable clarity automatic-evaluation method for optical remote sensing images

Science.gov (United States)

Qin, Bangyong; Shang, Ren; Li, Shengyang; Hei, Baoqin; Liu, Zhiwen

2015-10-01

Image clarity, which reflects the sharpness degree at the edge of objects in images, is an important quality evaluate index for optical remote sensing images. Scholars at home and abroad have done a lot of work on estimation of image clarity. At present, common clarity-estimation methods for digital images mainly include frequency-domain function methods, statistical parametric methods, gradient function methods and edge acutance methods. Frequency-domain function method is an accurate clarity-measure approach. However, its calculation process is complicate and cannot be carried out automatically. Statistical parametric methods and gradient function methods are both sensitive to clarity of images, while their results are easy to be affected by the complex degree of images. Edge acutance method is an effective approach for clarity estimate, while it needs picking out the edges manually. Due to the limits in accuracy, consistent or automation, these existing methods are not applicable to quality evaluation of optical remote sensing images. In this article, a new clarity-evaluation method, which is based on the principle of edge acutance algorithm, is proposed. In the new method, edge detection algorithm and gradient search algorithm are adopted to automatically search the object edges in images. Moreover, The calculation algorithm for edge sharpness has been improved. The new method has been tested with several groups of optical remote sensing images. Compared with the existing automatic evaluation methods, the new method perform better both in accuracy and consistency. Thus, the new method is an effective clarity evaluation method for optical remote sensing images.

Development of ADINA-J-integral code

International Nuclear Information System (INIS)

Kurihara, Ryoichi

1988-07-01

A general purpose finite element program ADINA (Automatic Dynamic Incremental Nonlinear Analysis), which was developed by Bathe et al., was revised to be able to calculate the J- and J-integral. This report introduced the numerical method to add this capability to the code, and the evaluation of the revised ADINA-J code by using a few of examples of the J estimation model, i.e. a compact tension specimen, a center cracked panel subjected to dynamic load, and a thick shell cylinder having inner axial crack subjected to thermal load. The evaluation testified the function of the revised code. (author)

Comparison of automatic and visual methods used for image segmentation in Endodontics: a microCT study.

Science.gov (United States)

Queiroz, Polyane Mazucatto; Rovaris, Karla; Santaella, Gustavo Machado; Haiter-Neto, Francisco; Freitas, Deborah Queiroz

2017-01-01

To calculate root canal volume and surface area in microCT images, an image segmentation by selecting threshold values is required, which can be determined by visual or automatic methods. Visual determination is influenced by the operator's visual acuity, while the automatic method is done entirely by computer algorithms. To compare between visual and automatic segmentation, and to determine the influence of the operator's visual acuity on the reproducibility of root canal volume and area measurements. Images from 31 extracted human anterior teeth were scanned with a μCT scanner. Three experienced examiners performed visual image segmentation, and threshold values were recorded. Automatic segmentation was done using the "Automatic Threshold Tool" available in the dedicated software provided by the scanner's manufacturer. Volume and area measurements were performed using the threshold values determined both visually and automatically. The paired Student's t-test showed no significant difference between visual and automatic segmentation methods regarding root canal volume measurements (p=0.93) and root canal surface (p=0.79). Although visual and automatic segmentation methods can be used to determine the threshold and calculate root canal volume and surface, the automatic method may be the most suitable for ensuring the reproducibility of threshold determination.

Parallelization methods study of thermal-hydraulics codes

International Nuclear Information System (INIS)

Gaudart, Catherine

2000-01-01

The variety of parallelization methods and machines leads to a wide selection for programmers. In this study we suggest, in an industrial context, some solutions from the experience acquired through different parallelization methods. The study is about several scientific codes which simulate a large variety of thermal-hydraulics phenomena. A bibliography on parallelization methods and a first analysis of the codes showed the difficulty of our process on the whole applications to study. Therefore, it would be necessary to identify and extract a representative part of these applications and parallelization methods. The linear solver part of the codes forced itself. On this particular part several parallelization methods had been used. From these developments one could estimate the necessary work for a non initiate programmer to parallelize his application, and the impact of the development constraints. The different methods of parallelization tested are the numerical library PETSc, the parallelizer PAF, the language HPF, the formalism PEI and the communications library MPI and PYM. In order to test several methods on different applications and to follow the constraint of minimization of the modifications in codes, a tool called SPS (Server of Parallel Solvers) had be developed. We propose to describe the different constraints about the optimization of codes in an industrial context, to present the solutions given by the tool SPS, to show the development of the linear solver part with the tested parallelization methods and lastly to compare the results against the imposed criteria. (author) [fr

Automatic methods for processing track-detector data at the PAVICOM facility

International Nuclear Information System (INIS)

Aleksandrov, A.B.; Goncharova, L.A.; Polukhina, N.G.; Fejnberg, E.L.; Davydov, D.A.; Publichenko, P.A.; Roganova, T.M.

2007-01-01

New automatic methods essentially simplify and hasten the data treatment of tracking detectors. It allows handling big data files and appreciably improves their statistics; this fact predetermines an elaboration of new experiments, which suppose to use large volume targets, emulsive and solid-state large square tracking detectors. Thereupon the problem of training competent physicists able to work on modern automatic equipment is very relevant. About ten Moscow students working in LPI at PAVICOM facility master new methods every year. Most of the students working in high-energy physics take the print only about archaic hand methods of data handling from tracking detectors. In 2005 on the base of the PAVICOM facility and physics training of the MSU a new educational work for determination of the energy of neutrons passing through nuclear emulsion, which lets students acquire a base habit of data handling from tracking detectors using an automatic facility, was prepared; it can be included in the training process for students of any physical faculty. Specialists mastering methods of an automatic handling by the simple and obvious example of tracking detectors will be able to use their knowledge in various areas of science and techniques. The organization of upper division courses is a new additional aspect of using the PAVICOM facility described in an earlier paper [4

LHC-GCS a model-driven approach for automatic PLC and SCADA code generation

CERN Document Server

Thomas, Geraldine; Barillère, Renaud; Cabaret, Sebastien; Kulman, Nikolay; Pons, Xavier; Rochez, Jacques

2005-01-01

The LHC experiments’ Gas Control System (LHC GCS) project [1] aims to provide the four LHC experiments (ALICE, ATLAS, CMS and LHCb) with control for their 23 gas systems. To ease the production and maintenance of 23 control systems, a model-driven approach has been adopted to generate automatically the code for the Programmable Logic Controllers (PLCs) and for the Supervision Control And Data Acquisition (SCADA) systems. The first milestones of the project have been achieved. The LHC GCS framework [4] and the generation tools have been produced. A first control application has actually been generated and is in production, and a second is in preparation. This paper describes the principle and the architecture of the model-driven solution. It will in particular detail how the model-driven solution fits with the LHC GCS framework and with the UNICOS [5] data-driven tools.

Development of an automatic validation system for simulation codes of the fusion research; Entwicklung eines automatischen Validierungssystems fuer Simulationscodes der Fusionsforschung

Energy Technology Data Exchange (ETDEWEB)

Galonska, Andreas

2010-03-15

In the present master thesis the development oa an automatic validation system for the simulation code ERO is documented. This 3D Monte-carlo code models the transport of impurities as well as plasma-wall interaction processes and has great importance for the fusion research. The validation system is based on JuBE (Julich Benchmarking Environment), the flexibility of which allows a slight extension of the system to other codes, for instance such, which are operated in the framework of the EU Task Force ITM (Integrated Tokamak Modelling). The chosen solution - JuBE and a special program for the ''intellectual'' comparison of actual and reference-edition data of ERO is described and founded. The use of this program and the configuration of JuBE are detailedly described. Simulations to different plasma experiments, which serve as reference cases for the automatic validation, are explained. The working of the system is illustrated by the description of a test case. This treats the failure localization and improvement in the parallelization of an important ERO module (tracking of physically eroded particle). It is demonstrated, how the system reacts in an erroneous validation and the subsequently performed error correction leads to a positive result. Finally a speed-up curve of the parallelization is established by means of the output data of JuBE.

The automatic programming for safety-critical software in nuclear power plants

Energy Technology Data Exchange (ETDEWEB)

Kim, Jang Yeol; Eom, Heung Seop; Choi, You Rark

1998-06-01

We defined the Korean unique safety-critical software development methodology by modifying Dr. Harel`s statechart-based on formal methods in order to digitalized the reactor protection system. It is suggested software requirement specification guideline to specify design specification which is basis for requirement specification and automatic programming by the caused by shutdown parameter logic of the steam generator water level for Wolsung 2/3/4 unit SDS no.1 and simulated it by binding the Graphic User Interface (GUI). We generated the K and R C code automatically by utilizing the Statemate MAGNUM Sharpshooter/C code generator. Auto-generated K and R C code is machine independent code and has high productivity, quality and provability. The following are the summaries of major research and development. - Set up the Korean unique safety-critical software development methodology - Developed software requirement specification guidelines - Developed software design specification guidelines - Reactor trip modeling for steam generator waster level Wolsung 2/3/4 SDS no. 1 shutdown parameter logic - Graphic panel binding with GUI. (author). 20 refs., 12 tabs., 15 figs

The automatic programming for safety-critical software in nuclear power plants

International Nuclear Information System (INIS)

Kim, Jang Yeol; Eom, Heung Seop; Choi, You Rark

1998-06-01

We defined the Korean unique safety-critical software development methodology by modifying Dr. Harel's statechart-based on formal methods in order to digitalized the reactor protection system. It is suggested software requirement specification guideline to specify design specification which is basis for requirement specification and automatic programming by the caused by shutdown parameter logic of the steam generator water level for Wolsung 2/3/4 unit SDS no.1 and simulated it by binding the Graphic User Interface (GUI). We generated the K and R C code automatically by utilizing the Statemate MAGNUM Sharpshooter/C code generator. Auto-generated K and R C code is machine independent code and has high productivity, quality and provability. The following are the summaries of major research and development. - Set up the Korean unique safety-critical software development methodology - Developed software requirement specification guidelines - Developed software design specification guidelines - Reactor trip modeling for steam generator waster level Wolsung 2/3/4 SDS no. 1 shutdown parameter logic - Graphic panel binding with GUI. (author). 20 refs., 12 tabs., 15 figs

Synthesizing Certified Code

Science.gov (United States)

Whalen, Michael; Schumann, Johann; Fischer, Bernd

2002-01-01

Code certification is a lightweight approach to demonstrate software quality on a formal level. Its basic idea is to require producers to provide formal proofs that their code satisfies certain quality properties. These proofs serve as certificates which can be checked independently. Since code certification uses the same underlying technology as program verification, it also requires many detailed annotations (e.g., loop invariants) to make the proofs possible. However, manually adding theses annotations to the code is time-consuming and error-prone. We address this problem by combining code certification with automatic program synthesis. We propose an approach to generate simultaneously, from a high-level specification, code and all annotations required to certify generated code. Here, we describe a certification extension of AUTOBAYES, a synthesis tool which automatically generates complex data analysis programs from compact specifications. AUTOBAYES contains sufficient high-level domain knowledge to generate detailed annotations. This allows us to use a general-purpose verification condition generator to produce a set of proof obligations in first-order logic. The obligations are then discharged using the automated theorem E-SETHEO. We demonstrate our approach by certifying operator safety for a generated iterative data classification program without manual annotation of the code.

Calibration Methods for Reliability-Based Design Codes

DEFF Research Database (Denmark)

Gayton, N.; Mohamed, A.; Sørensen, John Dalsgaard

2004-01-01

The calibration methods are applied to define the optimal code format according to some target safety levels. The calibration procedure can be seen as a specific optimization process where the control variables are the partial factors of the code. Different methods are available in the literature...

On the Automatic Parallelization of Sparse and Irregular Fortran Programs

Directory of Open Access Journals (Sweden)

Yuan Lin

1999-01-01

Full Text Available Automatic parallelization is usually believed to be less effective at exploiting implicit parallelism in sparse/irregular programs than in their dense/regular counterparts. However, not much is really known because there have been few research reports on this topic. In this work, we have studied the possibility of using an automatic parallelizing compiler to detect the parallelism in sparse/irregular programs. The study with a collection of sparse/irregular programs led us to some common loop patterns. Based on these patterns new techniques were derived that produced good speedups when manually applied to our benchmark codes. More importantly, these parallelization methods can be implemented in a parallelizing compiler and can be applied automatically.

An asynchronous writing method for restart files in the gysela code in prevision of exascale systems*

Directory of Open Access Journals (Sweden)

Thomine O.

2013-12-01

Full Text Available The present work deals with an optimization procedure developed in the full-f global GYrokinetic SEmi-LAgrangian code (GYSELA. Optimizing the writing of the restart files is necessary to reduce the computing impact of crashes. These files require a very large memory space, and particularly so for very large mesh sizes. The limited bandwidth of the data pipe between the comput- ing nodes and the storage system induces a non-scalable part in the GYSELA code, which increases with the mesh size. Indeed the transfer time of RAM to data depends linearly on the files size. The necessity of non synchronized writing-in-file procedure is therefore crucial. A new GYSELA module has been developed. This asynchronous procedure allows the frequent writ- ing of the restart files, whilst preventing a severe slowing down due to the limited writing bandwidth. This method has been improved to generate a checksum control of the restart files, and automatically rerun the code in case of a crash for any cause.

A comparison of different methods to implement higher order derivatives of density functionals

Energy Technology Data Exchange (ETDEWEB)

van Dam, Hubertus J.J. [Brookhaven National Lab. (BNL), Upton, NY (United States)

2016-05-18

Density functional theory is the dominant approach in electronic structure methods today. To calculate properties higher order derivatives of the density functionals are required. These derivatives might be implemented manually,by automatic differentiation, or by symbolic algebra programs. Different authors have cited different reasons for using the particular method of their choice. This paper presents work where all three approaches were used and the strengths and weaknesses of each approach are considered. It is found that all three methods produce code that is suffficiently performanted for practical applications, despite the fact that our symbolic algebra generated code and our automatic differentiation code still have scope for significant optimization. The automatic differentiation approach is the best option for producing readable and maintainable code.

Assessment of automatic segmentation of teeth using a watershed-based method.

Science.gov (United States)

Galibourg, Antoine; Dumoncel, Jean; Telmon, Norbert; Calvet, Adèle; Michetti, Jérôme; Maret, Delphine

2018-01-01

Tooth 3D automatic segmentation (AS) is being actively developed in research and clinical fields. Here, we assess the effect of automatic segmentation using a watershed-based method on the accuracy and reproducibility of 3D reconstructions in volumetric measurements by comparing it with a semi-automatic segmentation(SAS) method that has already been validated. The study sample comprised 52 teeth, scanned with micro-CT (41 µm voxel size) and CBCT (76; 200 and 300 µm voxel size). Each tooth was segmented by AS based on a watershed method and by SAS. For all surface reconstructions, volumetric measurements were obtained and analysed statistically. Surfaces were then aligned using the SAS surfaces as the reference. The topography of the geometric discrepancies was displayed by using a colour map allowing the maximum differences to be located. AS reconstructions showed similar tooth volumes when compared with SAS for the 41 µm voxel size. A difference in volumes was observed, and increased with the voxel size for CBCT data. The maximum differences were mainly found at the cervical margins and incisal edges but the general form was preserved. Micro-CT, a modality used in dental research, provides data that can be segmented automatically, which is timesaving. AS with CBCT data enables the general form of the region of interest to be displayed. However, our AS method can still be used for metrically reliable measurements in the field of clinical dentistry if some manual refinements are applied.

Method for coding low entrophy data

Science.gov (United States)

Yeh, Pen-Shu (Inventor)

1995-01-01

A method of lossless data compression for efficient coding of an electronic signal of information sources of very low information rate is disclosed. In this method, S represents a non-negative source symbol set, (s(sub 0), s(sub 1), s(sub 2), ..., s(sub N-1)) of N symbols with s(sub i) = i. The difference between binary digital data is mapped into symbol set S. Consecutive symbols in symbol set S are then paired into a new symbol set Gamma which defines a non-negative symbol set containing the symbols (gamma(sub m)) obtained as the extension of the original symbol set S. These pairs are then mapped into a comma code which is defined as a coding scheme in which every codeword is terminated with the same comma pattern, such as a 1. This allows a direct coding and decoding of the n-bit positive integer digital data differences without the use of codebooks.

Code, standard and specifications

International Nuclear Information System (INIS)

Abdul Nassir Ibrahim; Azali Muhammad; Ab. Razak Hamzah; Abd. Aziz Mohamed; Mohamad Pauzi Ismail

2008-01-01

Radiography also same as the other technique, it need standard. This standard was used widely and method of used it also regular. With that, radiography testing only practical based on regulations as mentioned and documented. These regulation or guideline documented in code, standard and specifications. In Malaysia, level one and basic radiographer can do radiography work based on instruction give by level two or three radiographer. This instruction was produced based on guideline that mention in document. Level two must follow the specifications mentioned in standard when write the instruction. From this scenario, it makes clearly that this radiography work is a type of work that everything must follow the rule. For the code, the radiography follow the code of American Society for Mechanical Engineer (ASME) and the only code that have in Malaysia for this time is rule that published by Atomic Energy Licensing Board (AELB) known as Practical code for radiation Protection in Industrial radiography. With the existence of this code, all the radiography must follow the rule or standard regulated automatically.

A fast and automatic mosaic method for high-resolution satellite images

Science.gov (United States)

Chen, Hongshun; He, Hui; Xiao, Hongyu; Huang, Jing

2015-12-01

We proposed a fast and fully automatic mosaic method for high-resolution satellite images. First, the overlapped rectangle is computed according to geographical locations of the reference and mosaic images and feature points on both the reference and mosaic images are extracted by a scale-invariant feature transform (SIFT) algorithm only from the overlapped region. Then, the RANSAC method is used to match feature points of both images. Finally, the two images are fused into a seamlessly panoramic image by the simple linear weighted fusion method or other method. The proposed method is implemented in C++ language based on OpenCV and GDAL, and tested by Worldview-2 multispectral images with a spatial resolution of 2 meters. Results show that the proposed method can detect feature points efficiently and mosaic images automatically.

Synthesis of digital locomotive receiver of automatic locomotive signaling

Directory of Open Access Journals (Sweden)

K. V. Goncharov

2013-02-01

Full Text Available Purpose. Automatic locomotive signaling of continuous type with a numeric coding (ALSN has several disadvantages: a small number of signal indications, low noise stability, high inertia and low functional flexibility. Search for new and more advanced methods of signal processing for automatic locomotive signaling, synthesis of the noise proof digital locomotive receiver are essential. Methodology. The proposed algorithm of detection and identification locomotive signaling codes is based on the definition of mutual correlations of received oscillation and reference signals. For selecting threshold levels of decision element the following criterion has been formulated: the locomotive receiver should maximum set the correct solution for a given probability of dangerous errors. Findings. It has been found that the random nature of the ALSN signal amplitude does not affect the detection algorithm. However, the distribution law and numeric characteristics of signal amplitude affect the probability of errors, and should be considered when selecting a threshold levels According to obtained algorithm of detection and identification ALSN signals the digital locomotive receiver has been synthesized. It contains band pass filter, peak limiter, normalizing amplifier with automatic gain control circuit, analog to digital converter and digital signal processor. Originality. The ALSN system is improved by the way of the transfer of technical means to modern microelectronic element base, more perfect methods of detection and identification codes of locomotive signaling are applied. Practical value. Use of digital technology in the construction of the locomotive receiver ALSN will expand its functionality, will increase the noise immunity and operation stability of the locomotive signal system in conditions of various destabilizing factors.

a Method for the Seamlines Network Automatic Selection Based on Building Vector

Science.gov (United States)

Li, P.; Dong, Y.; Hu, Y.; Li, X.; Tan, P.

2018-04-01

In order to improve the efficiency of large scale orthophoto production of city, this paper presents a method for automatic selection of seamlines network in large scale orthophoto based on the buildings' vector. Firstly, a simple model of the building is built by combining building's vector, height and DEM, and the imaging area of the building on single DOM is obtained. Then, the initial Voronoi network of the measurement area is automatically generated based on the positions of the bottom of all images. Finally, the final seamlines network is obtained by optimizing all nodes and seamlines in the network automatically based on the imaging areas of the buildings. The experimental results show that the proposed method can not only get around the building seamlines network quickly, but also remain the Voronoi network' characteristics of projection distortion minimum theory, which can solve the problem of automatic selection of orthophoto seamlines network in image mosaicking effectively.

Classifying Coding DNA with Nucleotide Statistics

Directory of Open Access Journals (Sweden)

Nicolas Carels

2009-10-01

Full Text Available In this report, we compared the success rate of classification of coding sequences (CDS vs. introns by Codon Structure Factor (CSF and by a method that we called Universal Feature Method (UFM. UFM is based on the scoring of purine bias (Rrr and stop codon frequency. We show that the success rate of CDS/intron classification by UFM is higher than by CSF. UFM classifies ORFs as coding or non-coding through a score based on (i the stop codon distribution, (ii the product of purine probabilities in the three positions of nucleotide triplets, (iii the product of Cytosine (C, Guanine (G, and Adenine (A probabilities in the 1st, 2nd, and 3rd positions of triplets, respectively, (iv the probabilities of G in 1st and 2nd position of triplets and (v the distance of their GC3 vs. GC2 levels to the regression line of the universal correlation. More than 80% of CDSs (true positives of Homo sapiens (>250 bp, Drosophila melanogaster (>250 bp and Arabidopsis thaliana (>200 bp are successfully classified with a false positive rate lower or equal to 5%. The method releases coding sequences in their coding strand and coding frame, which allows their automatic translation into protein sequences with 95% confidence. The method is a natural consequence of the compositional bias of nucleotides in coding sequences.

Automatic schema evolution in Root

International Nuclear Information System (INIS)

Brun, R.; Rademakers, F.

2001-01-01

ROOT version 3 (spring 2001) supports automatic class schema evolution. In addition this version also produces files that are self-describing. This is achieved by storing in each file a record with the description of all the persistent classes in the file. Being self-describing guarantees that a file can always be read later, its structure browsed and objects inspected, also when the library with the compiled code of these classes is missing. The schema evolution mechanism supports the frequent case when multiple data sets generated with many different class versions must be analyzed in the same session. ROOT supports the automatic generation of C++ code describing the data objects in a file

Another Method of Building 2D Entropy to Realize Automatic Segmentation

International Nuclear Information System (INIS)

Zhang, Y F; Zhang, Y

2006-01-01

2D entropy formed during the process of building 2D histogram can realize automatic segmentation. Traditional method utilizes central pixel grey value and the others or all of pixels grey mean value in 4-neighbor to build 2D histogram. In fact, the change of the greyscale value between two ''invariable position vectors'' cannot represent the total characteristics among neighbour pixels very well. A new method is proposed which makes use of minimum grey value in the 4-neighbor and of maximum grey value in the 3x3 neighbour except pixels of the 4-neighbor. New method and traditional one are used in contrast to realize image automatic segmentation. The experimental results of the classical image prove the new method is effective

Simulation technology to develop the automatic control rod operation system in ABWR

Energy Technology Data Exchange (ETDEWEB)

Yoshihiko, Ishii; Atsushi, Fushimi; Naoyuki, Ishida [Hitachi Ltd. Power and Industrial Systems R and D Laboratory, Ibaraki (Japan); Hitoshi, Ochi; Masakazu, Yuzuki [Hitachi Ltd. Power Systems, Hitachi Works, Ibaraki (Japan); Hideki, Hanami [Hitachi Ltd. Information and Control System Div., Ibaraki (Japan)

2007-07-01

To design and verify the automatic power regulator system (APR) for an advanced boiling water reactor (ABWR), Hitachi has developed a plant simulation code system. The 3-dimensional kinetic analysis code STAND, based on a polynomial nodal expansion method, was effective in developing an APR automatic control rod operation algorithm in the critical mode. The point kinetic plant simulator AUTSIMU is an off-line and real time online plant simulation code that can simulate ABWR start-up and shutdown processes from a sub-critical condition with a water temperature of 20 degrees C to the rated operation power level at about 7 MPa. APR operation algorithms were designed using the off-line mode. In this mode, less than one minute in real time was needed to simulate a ten-hour transient with an ordinary personal computer. In the online mode, APR hardware was efficiently verified in a factory test before shipping. The codes were verified with ABWR start-up experimental data. It was confirmed that the simulators were effective in simulating ABWR plant start-up behavior. (authors)

Preventing SQL Injection through Automatic Query Sanitization with ASSIST

Directory of Open Access Journals (Sweden)

Raymond Mui

2010-09-01

Full Text Available Web applications are becoming an essential part of our everyday lives. Many of our activities are dependent on the functionality and security of these applications. As the scale of these applications grows, injection vulnerabilities such as SQL injection are major security challenges for developers today. This paper presents the technique of automatic query sanitization to automatically remove SQL injection vulnerabilities in code. In our technique, a combination of static analysis and program transformation are used to automatically instrument web applications with sanitization code. We have implemented this technique in a tool named ASSIST (Automatic and Static SQL Injection Sanitization Tool for protecting Java-based web applications. Our experimental evaluation showed that our technique is effective against SQL injection vulnerabilities and has a low overhead.

METHODS OF AUTOMATIC QUALITY CONTROL OF AGGLUTINANTSANDS IN FOUNDRY

Directory of Open Access Journals (Sweden)

D. M. Kukuj

2004-01-01

Full Text Available The article is dedicated to comparative analysis of the well-known methods of automatic quality control of agglutinant sands in process of their preparation and to the problems of automation control of the mix preparation processes.

Automatic control logics to eliminate xenon oscillation based on Axial Offsets Trajectory Method

International Nuclear Information System (INIS)

Shimazu, Yoichiro

1996-01-01

We have proposed Axial Offsets (AO) Trajectory Method for xenon oscillation control in pressurized water reactors. The features of this method are described as such that it can clearly give necessary control operations to eliminate xenon oscillations. It is expected that using the features automatic control logics for xenon oscillations can be simple and be realized easily. We investigated automatic control logics. The AO Trajectory Method could realize a very simple logic only for eliminating xenon oscillations. However it was necessary to give another considerations to eliminate the xenon oscillation with a given axial power distribution. The other control logic based on the modern control theory was also studied for comparison of the control performance of the new control logic. As the results, it is presented that the automatic control logics based on the AO Trajectory Method are very simple and effective. (author)

A method for scientific code coupling in a distributed environment

International Nuclear Information System (INIS)

Caremoli, C.; Beaucourt, D.; Chen, O.; Nicolas, G.; Peniguel, C.; Rascle, P.; Richard, N.; Thai Van, D.; Yessayan, A.

1994-12-01

This guide book deals with coupling of big scientific codes. First, the context is introduced: big scientific codes devoted to a specific discipline coming to maturity, and more and more needs in terms of multi discipline studies. Then we describe different kinds of code coupling and an example of code coupling: 3D thermal-hydraulic code THYC and 3D neutronics code COCCINELLE. With this example we identify problems to be solved to realize a coupling. We present the different numerical methods usable for the resolution of coupling terms. This leads to define two kinds of coupling: with the leak coupling, we can use explicit methods, and with the strong coupling we need to use implicit methods. On both cases, we analyze the link with the way of parallelizing code. For translation of data from one code to another, we define the notion of Standard Coupling Interface based on a general structure for data. This general structure constitutes an intermediary between the codes, thus allowing a relative independence of the codes from a specific coupling. The proposed method for the implementation of a coupling leads to a simultaneous run of the different codes, while they exchange data. Two kinds of data communication with message exchange are proposed: direct communication between codes with the use of PVM product (Parallel Virtual Machine) and indirect communication with a coupling tool. This second way, with a general code coupling tool, is based on a coupling method, and we strongly recommended to use it. This method is based on the two following principles: re-usability, that means few modifications on existing codes, and definition of a code usable for coupling, that leads to separate the design of a code usable for coupling from the realization of a specific coupling. This coupling tool available from beginning of 1994 is described in general terms. (authors). figs., tabs

AISLE: an automatic volumetric segmentation method for the study of lung allometry.

Science.gov (United States)

Ren, Hongliang; Kazanzides, Peter

2011-01-01

We developed a fully automatic segmentation method for volumetric CT (computer tomography) datasets to support construction of a statistical atlas for the study of allometric laws of the lung. The proposed segmentation method, AISLE (Automated ITK-Snap based on Level-set), is based on the level-set implementation from an existing semi-automatic segmentation program, ITK-Snap. AISLE can segment the lung field without human interaction and provide intermediate graphical results as desired. The preliminary experimental results show that the proposed method can achieve accurate segmentation, in terms of volumetric overlap metric, by comparing with the ground-truth segmentation performed by a radiologist.

Sensitivity analysis and design optimization through automatic differentiation

International Nuclear Information System (INIS)

Hovland, Paul D; Norris, Boyana; Strout, Michelle Mills; Bhowmick, Sanjukta; Utke, Jean

2005-01-01

Automatic differentiation is a technique for transforming a program or subprogram that computes a function, including arbitrarily complex simulation codes, into one that computes the derivatives of that function. We describe the implementation and application of automatic differentiation tools. We highlight recent advances in the combinatorial algorithms and compiler technology that underlie successful implementation of automatic differentiation tools. We discuss applications of automatic differentiation in design optimization and sensitivity analysis. We also describe ongoing research in the design of language-independent source transformation infrastructures for automatic differentiation algorithms

CAD-based automatic modeling method for Geant4 geometry model through MCAM

International Nuclear Information System (INIS)

Wang, D.; Nie, F.; Wang, G.; Long, P.; LV, Z.

2013-01-01

The full text of publication follows. Geant4 is a widely used Monte Carlo transport simulation package. Before calculating using Geant4, the calculation model need be established which could be described by using Geometry Description Markup Language (GDML) or C++ language. However, it is time-consuming and error-prone to manually describe the models by GDML. Automatic modeling methods have been developed recently, but there are some problems that exist in most present modeling programs, specially some of them were not accurate or adapted to specifically CAD format. To convert the GDML format models to CAD format accurately, a Geant4 Computer Aided Design (CAD) based modeling method was developed for automatically converting complex CAD geometry model into GDML geometry model. The essence of this method was dealing with CAD model represented with boundary representation (B-REP) and GDML model represented with constructive solid geometry (CSG). At first, CAD model was decomposed to several simple solids which had only one close shell. And then the simple solid was decomposed to convex shell set. Then corresponding GDML convex basic solids were generated by the boundary surfaces getting from the topological characteristic of a convex shell. After the generation of these solids, GDML model was accomplished with series boolean operations. This method was adopted in CAD/Image-based Automatic Modeling Program for Neutronics and Radiation Transport (MCAM), and tested with several models including the examples in Geant4 install package. The results showed that this method could convert standard CAD model accurately, and can be used for Geant4 automatic modeling. (authors)

Numerical method improvement for a subchannel code

Energy Technology Data Exchange (ETDEWEB)

Ding, W.J.; Gou, J.L.; Shan, J.Q. [Xi' an Jiaotong Univ., Shaanxi (China). School of Nuclear Science and Technology

2016-07-15

Previous studies showed that the subchannel codes need most CPU time to solve the matrix formed by the conservation equations. Traditional matrix solving method such as Gaussian elimination method and Gaussian-Seidel iteration method cannot meet the requirement of the computational efficiency. Therefore, a new algorithm for solving the block penta-diagonal matrix is designed based on Stone's incomplete LU (ILU) decomposition method. In the new algorithm, the original block penta-diagonal matrix will be decomposed into a block upper triangular matrix and a lower block triangular matrix as well as a nonzero small matrix. After that, the LU algorithm is applied to solve the matrix until the convergence. In order to compare the computational efficiency, the new designed algorithm is applied to the ATHAS code in this paper. The calculation results show that more than 80 % of the total CPU time can be saved with the new designed ILU algorithm for a 324-channel PWR assembly problem, compared with the original ATHAS code.

A Method of Generating Indoor Map Spatial Data Automatically from Architectural Plans

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SUN Weixin

2016-06-01

Full Text Available Taking architectural plans as data source, we proposed a method which can automatically generate indoor map spatial data. Firstly, referring to the spatial data demands of indoor map, we analyzed the basic characteristics of architectural plans, and introduced concepts of wall segment, adjoining node and adjoining wall segment, based on which basic flow of indoor map spatial data automatic generation was further established. Then, according to the adjoining relation between wall lines at the intersection with column, we constructed a repair method for wall connectivity in relation to the column. Utilizing the method of gradual expansibility and graphic reasoning to judge wall symbol local feature type at both sides of door or window, through update the enclosing rectangle of door or window, we developed a repair method for wall connectivity in relation to the door or window and a method for transform door or window into indoor map point feature. Finally, on the basis of geometric relation between adjoining wall segment median lines, a wall center-line extraction algorithm was presented. Taking one exhibition hall's architectural plan as example, we performed experiment and results show that the proposed methods have preferable applicability to deal with various complex situations, and realized indoor map spatial data automatic extraction effectively.

The use of a new automatic device for patients' assessment at Triage in Emergency Department

Directory of Open Access Journals (Sweden)

Salvatore Di Somma

2013-06-01

Full Text Available Objectives: To assess time saving in an Emergency Department arising out of the introduction of automatic devices (Carescape™ V100 to measure vital signs compared to the manual devices. Methods: We performed a prospective, observational study of eligible patients referring to Sant’Andrea Hospital Emergency Department during the entire month of October 2009, randomly assigned into two groups. In the first group of 476 patients vital signs measurements were detected with manual devices, while in the second group of 477 patients with automatic device Carescape™ V100. Results: Data indicated that the comparison of the total time between the two groups gave a significant difference (1993 vs 1518 min, p < 0.001. No differences were found with respect to age, sex and priority codes. Significant differences were also found when comparing the subgroups of the same acuity categories: white codes 4.33 vs 2.27 (min, p < 0.05; green codes 4.28 vs 3.37 (min, p < 0.001; yellow codes 3.92 vs 2.72 (min, p < 0.001. Conclusions: Our data demonstrated a statistical significance between the two groups with a difference of 475 minutes spent in Triage procedures including vital signs measurements. In conclusion time saved by vital signs automatic device could allow ED physicians to make a qualified approach with an earlier diagnosis and a more rapid and effective therapy, possibly improving patients’ outcomes. ABSTRACT of data concerning vital signs quality assessment, because we did not compare the two methods in the same patient and we did not correlate Triage priority evaluation with patients’ outcomes. In the future further studies should be specifically aimed to address this issue. In conclusion time saved by vital signs automatic device could allow ED physicians to make a qualified approach to patient with an earlier diagnosis and a more rapid and effective therapy, possibly improving patients’ outcomes.

Fourier spectral of PalmCode as descriptor for palmprint recognition

NARCIS (Netherlands)

Ruan, Qiuqi; Spreeuwers, Lieuwe Jan; Veldhuis, Raymond N.J.; Mu, Meiru

Study on automatic person recognition by palmprint is currently a hot topic. In this paper, we propose a novel palmprint recognition method by transforming the typical palmprint phase code feature into its Fourier frequency domain. The resulting real-valued Fourier spectral features are further

[Modeling and implementation method for the automatic biochemistry analyzer control system].

Science.gov (United States)

Wang, Dong; Ge, Wan-cheng; Song, Chun-lin; Wang, Yun-guang

2009-03-01

In this paper the system structure The automatic biochemistry analyzer is a necessary instrument for clinical diagnostics. First of is analyzed. The system problems description and the fundamental principles for dispatch are brought forward. Then this text puts emphasis on the modeling for the automatic biochemistry analyzer control system. The objects model and the communications model are put forward. Finally, the implementation method is designed. It indicates that the system based on the model has good performance.

Comparing a novel automatic 3D method for LGE-CMR quantification of scar size with established methods.

Science.gov (United States)

Woie, Leik; Måløy, Frode; Eftestøl, Trygve; Engan, Kjersti; Edvardsen, Thor; Kvaløy, Jan Terje; Ørn, Stein

2014-02-01

Current methods for the estimation of infarct size by late-enhanced cardiac magnetic imaging are based upon 2D analysis that first determines the size of the infarction in each slice, and thereafter adds the infarct sizes from each slice to generate a volume. We present a novel, automatic 3D method that estimates infarct size by a simultaneous analysis of all pixels from all slices. In a population of 54 patients with ischemic scars, the infarct size estimated by the automatic 3D method was compared with four established 2D methods. The new 3D method defined scar as the sum of all pixels with signal intensity (SI) ≥35 % of max SI from the complete myocardium, border zone: SI 35-50 % of max SI and core as SI ≥50 % of max SI. The 3D method yielded smaller infarct size (-2.8 ± 2.3 %) and core size (-3.0 ± 1.7 %) than the 2D method most similar to ours. There was no difference in the size of the border zone (0.2 ± 1.4 %). The 3D method demonstrated stronger correlations between scar size and left ventricular (LV) remodelling parameters (LV ejection fraction: r = -0.71, p 3D automatic method is without the need for manual demarcation of the scar; it is less time-consuming and has a stronger correlation with remodelling parameters compared with existing methods.

A new code for automatic detection and analysis of the lineament patterns for geophysical and geological purposes (ADALGEO)

Science.gov (United States)

Soto-Pinto, C.; Arellano-Baeza, A.; Sánchez, G.

2013-08-01

We present a new numerical method for automatic detection and analysis of changes in lineament patterns caused by seismic and volcanic activities. The method is implemented as a series of modules: (i) normalization of the image contrast, (ii) extraction of small linear features (stripes) through convolution of the part of the image in the vicinity of each pixel with a circular mask or through Canny algorithm, and (iii) posterior detection of main lineaments using the Hough transform. We demonstrate that our code reliably detects changes in the lineament patterns related to the stress evolution in the Earth's crust: specifically, a significant number of new lineaments appear approximately one month before an earthquake, while one month after the earthquake the lineament configuration returns to its initial state. Application of our software to the deformations caused by volcanic activity yields the opposite results: the number of lineaments decreases with the onset of microseismicity. This discrepancy can be explained assuming that the plate tectonic earthquakes are caused by the compression and accumulation of stress in the Earth's crust due to subduction of tectonic plates, whereas in the case of volcanic activity we deal with the inflation of a volcano edifice due to elevation of pressure and magma intrusion and the resulting stretching of the surface.

Automatic Loop Parallelization via Compiler Guided Refactoring

DEFF Research Database (Denmark)

Larsen, Per; Ladelsky, Razya; Lidman, Jacob

For many parallel applications, performance relies not on instruction-level parallelism, but on loop-level parallelism. Unfortunately, many modern applications are written in ways that obstruct automatic loop parallelization. Since we cannot identify sufficient parallelization opportunities...... for these codes in a static, off-line compiler, we developed an interactive compilation feedback system that guides the programmer in iteratively modifying application source, thereby improving the compiler’s ability to generate loop-parallel code. We use this compilation system to modify two sequential...... benchmarks, finding that the code parallelized in this way runs up to 8.3 times faster on an octo-core Intel Xeon 5570 system and up to 12.5 times faster on a quad-core IBM POWER6 system. Benchmark performance varies significantly between the systems. This suggests that semi-automatic parallelization should...

Application of a semi-automatic cartilage segmentation method for biomechanical modeling of the knee joint.

Science.gov (United States)

Liukkonen, Mimmi K; Mononen, Mika E; Tanska, Petri; Saarakkala, Simo; Nieminen, Miika T; Korhonen, Rami K

2017-10-01

Manual segmentation of articular cartilage from knee joint 3D magnetic resonance images (MRI) is a time consuming and laborious task. Thus, automatic methods are needed for faster and reproducible segmentations. In the present study, we developed a semi-automatic segmentation method based on radial intensity profiles to generate 3D geometries of knee joint cartilage which were then used in computational biomechanical models of the knee joint. Six healthy volunteers were imaged with a 3T MRI device and their knee cartilages were segmented both manually and semi-automatically. The values of cartilage thicknesses and volumes produced by these two methods were compared. Furthermore, the influences of possible geometrical differences on cartilage stresses and strains in the knee were evaluated with finite element modeling. The semi-automatic segmentation and 3D geometry construction of one knee joint (menisci, femoral and tibial cartilages) was approximately two times faster than with manual segmentation. Differences in cartilage thicknesses, volumes, contact pressures, stresses, and strains between segmentation methods in femoral and tibial cartilage were mostly insignificant (p > 0.05) and random, i.e. there were no systematic differences between the methods. In conclusion, the devised semi-automatic segmentation method is a quick and accurate way to determine cartilage geometries; it may become a valuable tool for biomechanical modeling applications with large patient groups.

Post-convergence automatic differentiation of iterative schemes

International Nuclear Information System (INIS)

Azmy, Y.Y.

1997-01-01

A new approach for performing automatic differentiation (AD) of computer codes that embody an iterative procedure, based on differentiating a single additional iteration upon achieving convergence, is described and implemented. This post-convergence automatic differentiation (PAD) technique results in better accuracy of the computed derivatives, as it eliminates part of the derivatives convergence error, and a large reduction in execution time, especially when many iterations are required to achieve convergence. In addition, it provides a way to compute derivatives of the converged solution without having to repeat the entire iterative process every time new parameters are considered. These advantages are demonstrated and the PAD technique is validated via a set of three linear and nonlinear codes used to solve neutron transport and fluid flow problems. The PAD technique reduces the execution time over direct AD by a factor of up to 30 and improves the accuracy of the derivatives by up to two orders of magnitude. The PAD technique's biggest disadvantage lies in the necessity to compute the iterative map's Jacobian, which for large problems can be prohibitive. Methods are discussed to alleviate this difficulty

Automatic Recognition Method for Optical Measuring Instruments Based on Machine Vision

Institute of Scientific and Technical Information of China (English)

SONG Le; LIN Yuchi; HAO Liguo

2008-01-01

Based on a comprehensive study of various algorithms, the automatic recognition of traditional ocular optical measuring instruments is realized. Taking a universal tools microscope (UTM) lens view image as an example, a 2-layer automatic recognition model for data reading is established after adopting a series of pre-processing algorithms. This model is an optimal combination of the correlation-based template matching method and a concurrent back propagation (BP) neural network. Multiple complementary feature extraction is used in generating the eigenvectors of the concurrent network. In order to improve fault-tolerance capacity, rotation invariant features based on Zernike moments are extracted from digit characters and a 4-dimensional group of the outline features is also obtained. Moreover, the operating time and reading accuracy can be adjusted dynamically by setting the threshold value. The experimental result indicates that the newly developed algorithm has optimal recognition precision and working speed. The average reading ratio can achieve 97.23%. The recognition method can automatically obtain the results of optical measuring instruments rapidly and stably without modifying their original structure, which meets the application requirements.

Automatic registration method for multisensor datasets adopted for dimensional measurements on cutting tools

International Nuclear Information System (INIS)

Shaw, L; Mehari, F; Weckenmann, A; Ettl, S; Häusler, G

2013-01-01

Multisensor systems with optical 3D sensors are frequently employed to capture complete surface information by measuring workpieces from different views. During coarse and fine registration the resulting datasets are afterward transformed into one common coordinate system. Automatic fine registration methods are well established in dimensional metrology, whereas there is a deficit in automatic coarse registration methods. The advantage of a fully automatic registration procedure is twofold: it enables a fast and contact-free alignment and further a flexible application to datasets of any kind of optical 3D sensor. In this paper, an algorithm adapted for a robust automatic coarse registration is presented. The method was originally developed for the field of object reconstruction or localization. It is based on a segmentation of planes in the datasets to calculate the transformation parameters. The rotation is defined by the normals of three corresponding segmented planes of two overlapping datasets, while the translation is calculated via the intersection point of the segmented planes. First results have shown that the translation is strongly shape dependent: 3D data of objects with non-orthogonal planar flanks cannot be registered with the current method. In the novel supplement for the algorithm, the translation is additionally calculated via the distance between centroids of corresponding segmented planes, which results in more than one option for the transformation. A newly introduced measure considering the distance between the datasets after coarse registration evaluates the best possible transformation. Results of the robust automatic registration method are presented on the example of datasets taken from a cutting tool with a fringe-projection system and a focus-variation system. The successful application in dimensional metrology is proven with evaluations of shape parameters based on the registered datasets of a calibrated workpiece. (paper)

A rule-based automatic sleep staging method.

Science.gov (United States)

Liang, Sheng-Fu; Kuo, Chin-En; Hu, Yu-Han; Cheng, Yu-Shian

2012-03-30

In this paper, a rule-based automatic sleep staging method was proposed. Twelve features including temporal and spectrum analyses of the EEG, EOG, and EMG signals were utilized. Normalization was applied to each feature to eliminating individual differences. A hierarchical decision tree with fourteen rules was constructed for sleep stage classification. Finally, a smoothing process considering the temporal contextual information was applied for the continuity. The overall agreement and kappa coefficient of the proposed method applied to the all night polysomnography (PSG) of seventeen healthy subjects compared with the manual scorings by R&K rules can reach 86.68% and 0.79, respectively. This method can integrate with portable PSG system for sleep evaluation at-home in the near future. Copyright © 2012 Elsevier B.V. All rights reserved.

10 CFR Appendix J1 to Subpart B of... - Uniform Test Method for Measuring the Energy Consumption of Automatic and Semi-Automatic Clothes...

Science.gov (United States)

2010-01-01

... 10 Energy 3 2010-01-01 2010-01-01 false Uniform Test Method for Measuring the Energy Consumption... Energy Consumption of Automatic and Semi-Automatic Clothes Washers The provisions of this appendix J1... means for determining the energy consumption of a clothes washer with an adaptive control system...

New Channel Coding Methods for Satellite Communication

Directory of Open Access Journals (Sweden)

J. Sebesta

2010-04-01

Full Text Available This paper deals with the new progressive channel coding methods for short message transmission via satellite transponder using predetermined length of frame. The key benefits of this contribution are modification and implementation of a new turbo code and utilization of unique features with applications of methods for bit error rate estimation and algorithm for output message reconstruction. The mentioned methods allow an error free communication with very low Eb/N0 ratio and they have been adopted for satellite communication, however they can be applied for other systems working with very low Eb/N0 ratio.

Motor automaticity in Parkinson’s disease

Science.gov (United States)

Wu, Tao; Hallett, Mark; Chan, Piu

2017-01-01

Bradykinesia is the most important feature contributing to motor difficulties in Parkinson’s disease (PD). However, the pathophysiology underlying bradykinesia is not fully understood. One important aspect is that PD patients have difficulty in performing learned motor skills automatically, but this problem has been generally overlooked. Here we review motor automaticity associated motor deficits in PD, such as reduced arm swing, decreased stride length, freezing of gait, micrographia and reduced facial expression. Recent neuroimaging studies have revealed some neural mechanisms underlying impaired motor automaticity in PD, including less efficient neural coding of movement, failure to shift automated motor skills to the sensorimotor striatum, instability of the automatic mode within the striatum, and use of attentional control and/or compensatory efforts to execute movements usually performed automatically in healthy people. PD patients lose previously acquired automatic skills due to their impaired sensorimotor striatum, and have difficulty in acquiring new automatic skills or restoring lost motor skills. More investigations on the pathophysiology of motor automaticity, the effect of L-dopa or surgical treatments on automaticity, and the potential role of using measures of automaticity in early diagnosis of PD would be valuable. PMID:26102020

Automatic Hypocenter Determination Method in JMA Catalog and its Application

Science.gov (United States)

Tamaribuchi, K.

2017-12-01

The number of detectable earthquakes around Japan has increased by developing the high-sensitivity seismic observation network. After the 2011 Tohoku-oki earthquake, the number of detectable earthquakes have dramatically increased due to its aftershocks and induced earthquakes. This enormous number of earthquakes caused inability of manually determination of all the hypocenters. The Japan Meteorological Agency (JMA), which produces the earthquake catalog in Japan, has developed a new automatic hypocenter determination method and started its operation from April 1, 2016. This method (named PF method; Phase combination Forward search method) can determine the hypocenters of earthquakes that occur simultaneously by searching for the optimal combination of P- and S-wave arrival times and the maximum amplitudes using a Bayesian estimation technique. In the 2016 Kumamoto earthquake sequence, we successfully detected about 70,000 aftershocks automatically during the period from April 14 to the end of May, and this method contributed to the real-time monitoring of the seismic activity. Furthermore, this method can be also applied to the Earthquake Early Warning (EEW). Application of this method for EEW is called the IPF method and has been used as the hypocenter determination method of the EEW system in JMA from December 2016. By developing this method further, it is possible to contribute to not only speeding up the catalog production, but also improving reliability of the early warning.

Pattern-Driven Automatic Parallelization

Directory of Open Access Journals (Sweden)

Christoph W. Kessler

1996-01-01

Full Text Available This article describes a knowledge-based system for automatic parallelization of a wide class of sequential numerical codes operating on vectors and dense matrices, and for execution on distributed memory message-passing multiprocessors. Its main feature is a fast and powerful pattern recognition tool that locally identifies frequently occurring computations and programming concepts in the source code. This tool also works for dusty deck codes that have been "encrypted" by former machine-specific code transformations. Successful pattern recognition guides sophisticated code transformations including local algorithm replacement such that the parallelized code need not emerge from the sequential program structure by just parallelizing the loops. It allows access to an expert's knowledge on useful parallel algorithms, available machine-specific library routines, and powerful program transformations. The partially restored program semantics also supports local array alignment, distribution, and redistribution, and allows for faster and more exact prediction of the performance of the parallelized target code than is usually possible.

Performance Evaluation of HARQ Technique with UMTS Turbo Code

Directory of Open Access Journals (Sweden)

S. S. Brkić

2011-11-01

Full Text Available The hybrid automatic repeat request technique (HARQ represents the error control principle which combines an error correcting code and automatic repeat request procedure (ARQ, within the same transmission system. In this paper, using Monte Carlo simulation process, the characteristics of HARQ technique are determined, for the case of the Universal Mobile Telecommunication System (UMTS turbo code.

Automatic contact algorithm in ppercase[dyna3d] for crashworthiness and impact problems

International Nuclear Information System (INIS)

Whirley, Robert G.; Engelmann, Bruce E.

1994-01-01

This paper presents a new approach for the automatic definition and treatment of mechanical contact in explicit non-linear finite element analysis. Automatic contact offers the benefits of significantly reduced model construction time and fewer opportunities for user error, but faces significant challenges in reliability and computational costs. Key aspects of the proposed new method include automatic identification of adjacent and opposite surfaces in the global search phase, and the use of a well-defined surface normal which allows a consistent treatment of shell intersection and corner contact conditions without adhoc rules. The paper concludes with three examples which illustrate the performance of the newly proposed algorithm in the public ppercase[dyna3d] code. ((orig.))

Unidirectional high fiber content composites: Automatic 3D FE model generation and damage simulation

DEFF Research Database (Denmark)

Qing, Hai; Mishnaevsky, Leon

2009-01-01

A new method and a software code for the automatic generation of 3D micromechanical FE models of unidirectional long-fiber-reinforced composite (LFRC) with high fiber volume fraction with random fiber arrangement are presented. The fiber arrangement in the cross-section is generated through random...

ExcelAutomat: a tool for systematic processing of files as applied to quantum chemical calculations

Science.gov (United States)

Laloo, Jalal Z. A.; Laloo, Nassirah; Rhyman, Lydia; Ramasami, Ponnadurai

2017-07-01

The processing of the input and output files of quantum chemical calculations often necessitates a spreadsheet as a key component of the workflow. Spreadsheet packages with a built-in programming language editor can automate the steps involved and thus provide a direct link between processing files and the spreadsheet. This helps to reduce user-interventions as well as the need to switch between different programs to carry out each step. The ExcelAutomat tool is the implementation of this method in Microsoft Excel (MS Excel) using the default Visual Basic for Application (VBA) programming language. The code in ExcelAutomat was adapted to work with the platform-independent open-source LibreOffice Calc, which also supports VBA. ExcelAutomat provides an interface through the spreadsheet to automate repetitive tasks such as merging input files, splitting, parsing and compiling data from output files, and generation of unique filenames. Selected extracted parameters can be retrieved as variables which can be included in custom codes for a tailored approach. ExcelAutomat works with Gaussian files and is adapted for use with other computational packages including the non-commercial GAMESS. ExcelAutomat is available as a downloadable MS Excel workbook or as a LibreOffice workbook.

Semi-automatic tool to ease the creation and optimization of GPU programs

DEFF Research Database (Denmark)

Jepsen, Jacob

2014-01-01

We present a tool that reduces the development time of GPU-executable code. We implement a catalogue of common optimizations specific to the GPU architecture. Through the tool, the programmer can semi-automatically transform a computationally-intensive code section into GPU-executable form...... of the transformations can be performed automatically, which makes the tool usable for both novices and experts in GPU programming....

2D automatic body-fitted structured mesh generation using advancing extraction method

Science.gov (United States)

Zhang, Yaoxin; Jia, Yafei

2018-01-01

This paper presents an automatic mesh generation algorithm for body-fitted structured meshes in Computational Fluids Dynamics (CFD) analysis using the Advancing Extraction Method (AEM). The method is applicable to two-dimensional domains with complex geometries, which have the hierarchical tree-like topography with extrusion-like structures (i.e., branches or tributaries) and intrusion-like structures (i.e., peninsula or dikes). With the AEM, the hierarchical levels of sub-domains can be identified, and the block boundary of each sub-domain in convex polygon shape in each level can be extracted in an advancing scheme. In this paper, several examples were used to illustrate the effectiveness and applicability of the proposed algorithm for automatic structured mesh generation, and the implementation of the method.

A semi-automatic method for peak and valley detection in free-breathing respiratory waveforms

International Nuclear Information System (INIS)

Lu Wei; Nystrom, Michelle M.; Parikh, Parag J.; Fooshee, David R.; Hubenschmidt, James P.; Bradley, Jeffrey D.; Low, Daniel A.

2006-01-01

The existing commercial software often inadequately determines respiratory peaks for patients in respiration correlated computed tomography. A semi-automatic method was developed for peak and valley detection in free-breathing respiratory waveforms. First the waveform is separated into breath cycles by identifying intercepts of a moving average curve with the inspiration and expiration branches of the waveform. Peaks and valleys were then defined, respectively, as the maximum and minimum between pairs of alternating inspiration and expiration intercepts. Finally, automatic corrections and manual user interventions were employed. On average for each of the 20 patients, 99% of 307 peaks and valleys were automatically detected in 2.8 s. This method was robust for bellows waveforms with large variations

An Automatic High Efficient Method for Dish Concentrator Alignment

Directory of Open Access Journals (Sweden)

Yong Wang

2014-01-01

for the alignment of faceted solar dish concentrator. The isosceles triangle configuration of facet’s footholds determines a fixed relation between light spot displacements and foothold movements, which allows an automatic determination of the amount of adjustments. Tests on a 25 kW Stirling Energy System dish concentrator verify the feasibility, accuracy, and efficiency of our method.

Coding for Electronic Mail

Science.gov (United States)

Rice, R. F.; Lee, J. J.

1986-01-01

Scheme for coding facsimile messages promises to reduce data transmission requirements to one-tenth current level. Coding scheme paves way for true electronic mail in which handwritten, typed, or printed messages or diagrams sent virtually instantaneously - between buildings or between continents. Scheme, called Universal System for Efficient Electronic Mail (USEEM), uses unsupervised character recognition and adaptive noiseless coding of text. Image quality of resulting delivered messages improved over messages transmitted by conventional coding. Coding scheme compatible with direct-entry electronic mail as well as facsimile reproduction. Text transmitted in this scheme automatically translated to word-processor form.

The spammed code offset method

NARCIS (Netherlands)

Skoric, B.; Vreede, de N.

2013-01-01

Helper data schemes are a security primitive used for privacy-preserving biometric databases and Physical Unclonable Functions. One of the oldest known helper data schemes is the Code Offset Method (COM). We propose an extension of the COM: the helper data is accompanied by many instances of fake

The spammed code offset method

NARCIS (Netherlands)

Skoric, B.; Vreede, de N.

2014-01-01

Helper data schemes are a security primitive used for privacy-preserving biometric databases and physical unclonable functions. One of the oldest known helper data schemes is the code offset method (COM). We propose an extension of the COM: the helper data are accompanied by many instances of fake

Automatic Modulation Classification of LFM and Polyphase-coded Radar Signals

Directory of Open Access Journals (Sweden)

S. B. S. Hanbali

2017-12-01

Full Text Available There are several techniques for detecting and classifying low probability of intercept radar signals such as Wigner distribution, Choi-Williams distribution and time-frequency rate distribution, but these distributions require high SNR. To overcome this problem, we propose a new technique for detecting and classifying linear frequency modulation signal and polyphase coded signals using optimum fractional Fourier transform at low SNR. The theoretical analysis and simulation experiments demonstrate the validity and efficiency of the proposed method.

MARS code manual volume I: code structure, system models, and solution methods

International Nuclear Information System (INIS)

Chung, Bub Dong; Kim, Kyung Doo; Bae, Sung Won; Jeong, Jae Jun; Lee, Seung Wook; Hwang, Moon Kyu; Yoon, Churl

2010-02-01

Korea Advanced Energy Research Institute (KAERI) conceived and started the development of MARS code with the main objective of producing a state-of-the-art realistic thermal hydraulic systems analysis code with multi-dimensional analysis capability. MARS achieves this objective by very tightly integrating the one dimensional RELAP5/MOD3 with the multi-dimensional COBRA-TF codes. The method of integration of the two codes is based on the dynamic link library techniques, and the system pressure equation matrices of both codes are implicitly integrated and solved simultaneously. In addition, the Equation-Of-State (EOS) for the light water was unified by replacing the EOS of COBRA-TF by that of the RELAP5. This theory manual provides a complete list of overall information of code structure and major function of MARS including code architecture, hydrodynamic model, heat structure, trip / control system and point reactor kinetics model. Therefore, this report would be very useful for the code users. The overall structure of the manual is modeled on the structure of the RELAP5 and as such the layout of the manual is very similar to that of the RELAP. This similitude to RELAP5 input is intentional as this input scheme will allow minimum modification between the inputs of RELAP5 and MARS3.1. MARS3.1 development team would like to express its appreciation to the RELAP5 Development Team and the USNRC for making this manual possible

Mitosis Counting in Breast Cancer: Object-Level Interobserver Agreement and Comparison to an Automatic Method.

Science.gov (United States)

Veta, Mitko; van Diest, Paul J; Jiwa, Mehdi; Al-Janabi, Shaimaa; Pluim, Josien P W

2016-01-01

Tumor proliferation speed, most commonly assessed by counting of mitotic figures in histological slide preparations, is an important biomarker for breast cancer. Although mitosis counting is routinely performed by pathologists, it is a tedious and subjective task with poor reproducibility, particularly among non-experts. Inter- and intraobserver reproducibility of mitosis counting can be improved when a strict protocol is defined and followed. Previous studies have examined only the agreement in terms of the mitotic count or the mitotic activity score. Studies of the observer agreement at the level of individual objects, which can provide more insight into the procedure, have not been performed thus far. The development of automatic mitosis detection methods has received large interest in recent years. Automatic image analysis is viewed as a solution for the problem of subjectivity of mitosis counting by pathologists. In this paper we describe the results from an interobserver agreement study between three human observers and an automatic method, and make two unique contributions. For the first time, we present an analysis of the object-level interobserver agreement on mitosis counting. Furthermore, we train an automatic mitosis detection method that is robust with respect to staining appearance variability and compare it with the performance of expert observers on an "external" dataset, i.e. on histopathology images that originate from pathology labs other than the pathology lab that provided the training data for the automatic method. The object-level interobserver study revealed that pathologists often do not agree on individual objects, even if this is not reflected in the mitotic count. The disagreement is larger for objects from smaller size, which suggests that adding a size constraint in the mitosis counting protocol can improve reproducibility. The automatic mitosis detection method can perform mitosis counting in an unbiased way, with substantial

MCB. A continuous energy Monte Carlo burnup simulation code

International Nuclear Information System (INIS)

Cetnar, J.; Wallenius, J.; Gudowski, W.

1999-01-01

A code for integrated simulation of neutrinos and burnup based upon continuous energy Monte Carlo techniques and transmutation trajectory analysis has been developed. Being especially well suited for studies of nuclear waste transmutation systems, the code is an extension of the well validated MCNP transport program of Los Alamos National Laboratory. Among the advantages of the code (named MCB) is a fully integrated data treatment combined with a time-stepping routine that automatically corrects for burnup dependent changes in reaction rates, neutron multiplication, material composition and self-shielding. Fission product yields are treated as continuous functions of incident neutron energy, using a non-equilibrium thermodynamical model of the fission process. In the present paper a brief description of the code and applied methods are given. (author)

CTCN: Colloid transport code -- nuclear

International Nuclear Information System (INIS)

Jain, R.

1993-01-01

This report describes the CTCN computer code, designed to solve the equations of transient colloidal transport of radionuclides in porous and fractured media. This Fortran 77 package solves systems of coupled nonlinear differential-algebraic equations with a wide range of boundary conditions. The package uses the Method of Lines technique with a special section which forms finite-difference discretizations in up to four spatial dimensions to automatically convert the system into a set of ordinary differential equations. The CTCN code then solves these equations using a robust, efficient ODE solver. Thus CTCN can be used to solve population balance equations along with the usual transport equations to model colloid transport processes or as a general problem solver to treat up to four-dimensional differential-algebraic systems

Interactive vs. automatic ultrasound image segmentation methods for staging hepatic lipidosis.

Science.gov (United States)

Weijers, Gert; Starke, Alexander; Haudum, Alois; Thijssen, Johan M; Rehage, Jürgen; De Korte, Chris L

2010-07-01

to predict TAG level in the liver. Receiver-operating-characteristics (ROC) analysis was applied to assess the performance and area under the curve (AUC) of predicting TAG and to compare the sensitivity and specificity of the methods. Best speckle-size estimates and overall performance (R2 = 0.71, AUC = 0.94) were achieved by using an SNR-based adaptive automatic-segmentation method (used TAG threshold: 50 mg/g liver wet weight). Automatic segmentation is thus feasible and profitable.

Sleep Spindles as an Electrographic Element: Description and Automatic Detection Methods

Directory of Open Access Journals (Sweden)

Dorothée Coppieters ’t Wallant

2016-01-01

Full Text Available Sleep spindle is a peculiar oscillatory brain pattern which has been associated with a number of sleep (isolation from exteroceptive stimuli, memory consolidation and individual characteristics (intellectual quotient. Oddly enough, the definition of a spindle is both incomplete and restrictive. In consequence, there is no consensus about how to detect spindles. Visual scoring is cumbersome and user dependent. To analyze spindle activity in a more robust way, automatic sleep spindle detection methods are essential. Various algorithms were developed, depending on individual research interest, which hampers direct comparisons and meta-analyses. In this review, sleep spindle is first defined physically and topographically. From this general description, we tentatively extract the main characteristics to be detected and analyzed. A nonexhaustive list of automatic spindle detection methods is provided along with a description of their main processing principles. Finally, we propose a technique to assess the detection methods in a robust and comparable way.

A method for automatically constructing the initial contour of the common carotid artery

Directory of Open Access Journals (Sweden)

Yara Omran

2013-10-01

Full Text Available In this article we propose a novel method to automatically set the initial contour that is used by the Active contours algorithm.The proposed method exploits the accumulative intensity profiles to locate the points on the arterial wall. The intensity profiles of sections that intersect the artery show distinguishable characterstics that make it possible to recognize them from the profiles of sections that do not intersect the artery walls. The proposed method is applied on ultrasound images of the transverse section of the common carotid artery, but it can be extended to be used on the images of the longitudinal section. The intensity profiles are classified using Support vector machine algorithm, and the results of different kernels are compared. The extracted features used for the classification are basically statistical features of the intensity profiles. The echogenicity of the arterial lumen, and gives the profiles that intersect the artery a special shape that helps recognizing these profiles from other general profiles.The outlining of the arterial walls may seem a classic task in image processing. However, most of the methods used to outline the artery start from a manual, or semi-automatic, initial contour.The proposed method is highly appreciated in automating the entire process of automatic artery detection and segmentation.

ASTRA - an automatic system for transport analysis in a tokamak

International Nuclear Information System (INIS)

Pereverzev, G.V.; Yushmanov, P.N.; Dnestrovskii, A.Yu.; Polevoi, A.R.; Tarasjan, K.N.; Zakharov, L.E.

1991-08-01

The set of codes described here - ASTRA (Automatic System of Transport Analysis) - is a flexible and effective tool for the study of transport mechanisms in reactor-oriented facilities of the tokamak type. Flexibility is provided within the ASTRA system by a wide choice of standard relationships, functions and subroutines representing various transport coefficients, methods of auxiliary heating and other physical processes in the tokamak plasma, as well as by the possibility of pre-setting transport equations and variables for data output in a simple and conseptually transparent form. The transport code produced by the ASTRA system provides an adequate representation of the discharges for present experimental conditions. (orig.)

Automatic code generation for distributed robotic systems

International Nuclear Information System (INIS)

Jones, J.P.

1993-01-01

Hetero Helix is a software environment which supports relatively large robotic system development projects. The environment supports a heterogeneous set of message-passing LAN-connected common-bus multiprocessors, but the programming model seen by software developers is a simple shared memory. The conceptual simplicity of shared memory makes it an extremely attractive programming model, especially in large projects where coordinating a large number of people can itself become a significant source of complexity. We present results from three system development efforts conducted at Oak Ridge National Laboratory over the past several years. Each of these efforts used automatic software generation to create 10 to 20 percent of the system

Quality assurance using outlier detection on an automatic segmentation method for the cerebellar peduncles

Science.gov (United States)

Li, Ke; Ye, Chuyang; Yang, Zhen; Carass, Aaron; Ying, Sarah H.; Prince, Jerry L.

2016-03-01

Cerebellar peduncles (CPs) are white matter tracts connecting the cerebellum to other brain regions. Automatic segmentation methods of the CPs have been proposed for studying their structure and function. Usually the performance of these methods is evaluated by comparing segmentation results with manual delineations (ground truth). However, when a segmentation method is run on new data (for which no ground truth exists) it is highly desirable to efficiently detect and assess algorithm failures so that these cases can be excluded from scientific analysis. In this work, two outlier detection methods aimed to assess the performance of an automatic CP segmentation algorithm are presented. The first one is a univariate non-parametric method using a box-whisker plot. We first categorize automatic segmentation results of a dataset of diffusion tensor imaging (DTI) scans from 48 subjects as either a success or a failure. We then design three groups of features from the image data of nine categorized failures for failure detection. Results show that most of these features can efficiently detect the true failures. The second method—supervised classification—was employed on a larger DTI dataset of 249 manually categorized subjects. Four classifiers—linear discriminant analysis (LDA), logistic regression (LR), support vector machine (SVM), and random forest classification (RFC)—were trained using the designed features and evaluated using a leave-one-out cross validation. Results show that the LR performs worst among the four classifiers and the other three perform comparably, which demonstrates the feasibility of automatically detecting segmentation failures using classification methods.

Automatic Detection of Acromegaly From Facial Photographs Using Machine Learning Methods.

Science.gov (United States)

Kong, Xiangyi; Gong, Shun; Su, Lijuan; Howard, Newton; Kong, Yanguo

2018-01-01

Automatic early detection of acromegaly is theoretically possible from facial photographs, which can lessen the prevalence and increase the cure probability. In this study, several popular machine learning algorithms were used to train a retrospective development dataset consisting of 527 acromegaly patients and 596 normal subjects. We firstly used OpenCV to detect the face bounding rectangle box, and then cropped and resized it to the same pixel dimensions. From the detected faces, locations of facial landmarks which were the potential clinical indicators were extracted. Frontalization was then adopted to synthesize frontal facing views to improve the performance. Several popular machine learning methods including LM, KNN, SVM, RT, CNN, and EM were used to automatically identify acromegaly from the detected facial photographs, extracted facial landmarks, and synthesized frontal faces. The trained models were evaluated using a separate dataset, of which half were diagnosed as acromegaly by growth hormone suppression test. The best result of our proposed methods showed a PPV of 96%, a NPV of 95%, a sensitivity of 96% and a specificity of 96%. Artificial intelligence can automatically early detect acromegaly with a high sensitivity and specificity. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

CAD-based Monte Carlo automatic modeling method based on primitive solid

International Nuclear Information System (INIS)

Wang, Dong; Song, Jing; Yu, Shengpeng; Long, Pengcheng; Wang, Yongliang

2016-01-01

Highlights: • We develop a method which bi-convert between CAD model and primitive solid. • This method was improved from convert method between CAD model and half space. • This method was test by ITER model and validated the correctness and efficiency. • This method was integrated in SuperMC which could model for SuperMC and Geant4. - Abstract: Monte Carlo method has been widely used in nuclear design and analysis, where geometries are described with primitive solids. However, it is time consuming and error prone to describe a primitive solid geometry, especially for a complicated model. To reuse the abundant existed CAD models and conveniently model with CAD modeling tools, an automatic modeling method for accurate prompt modeling between CAD model and primitive solid is needed. An automatic modeling method for Monte Carlo geometry described by primitive solid was developed which could bi-convert between CAD model and Monte Carlo geometry represented by primitive solids. While converting from CAD model to primitive solid model, the CAD model was decomposed into several convex solid sets, and then corresponding primitive solids were generated and exported. While converting from primitive solid model to the CAD model, the basic primitive solids were created and related operation was done. This method was integrated in the SuperMC and was benchmarked with ITER benchmark model. The correctness and efficiency of this method were demonstrated.

A Simple and Automatic Method for Locating Surgical Guide Hole

Science.gov (United States)

Li, Xun; Chen, Ming; Tang, Kai

2017-12-01

Restoration-driven surgical guides are widely used in implant surgery. This study aims to provide a simple and valid method of automatically locating surgical guide hole, which can reduce operator's experiences and improve the design efficiency and quality of surgical guide. Few literatures can be found on this topic and the paper proposed a novel and simple method to solve this problem. In this paper, a local coordinate system for each objective tooth is geometrically constructed in CAD system. This coordinate system well represents dental anatomical features and the center axis of the objective tooth (coincide with the corresponding guide hole axis) can be quickly evaluated in this coordinate system, finishing the location of the guide hole. The proposed method has been verified by comparing two types of benchmarks: manual operation by one skilled doctor with over 15-year experiences (used in most hospitals) and automatic way using one popular commercial package Simplant (used in few hospitals).Both the benchmarks and the proposed method are analyzed in their stress distribution when chewing and biting. The stress distribution is visually shown and plotted as a graph. The results show that the proposed method has much better stress distribution than the manual operation and slightly better than Simplant, which will significantly reduce the risk of cervical margin collapse and extend the wear life of the restoration.

Method for automatically evaluating a transition from a batch manufacturing technique to a lean manufacturing technique

Science.gov (United States)

Ivezic, Nenad; Potok, Thomas E.

2003-09-30

A method for automatically evaluating a manufacturing technique comprises the steps of: receiving from a user manufacturing process step parameters characterizing a manufacturing process; accepting from the user a selection for an analysis of a particular lean manufacturing technique; automatically compiling process step data for each process step in the manufacturing process; automatically calculating process metrics from a summation of the compiled process step data for each process step; and, presenting the automatically calculated process metrics to the user. A method for evaluating a transition from a batch manufacturing technique to a lean manufacturing technique can comprise the steps of: collecting manufacturing process step characterization parameters; selecting a lean manufacturing technique for analysis; communicating the selected lean manufacturing technique and the manufacturing process step characterization parameters to an automatic manufacturing technique evaluation engine having a mathematical model for generating manufacturing technique evaluation data; and, using the lean manufacturing technique evaluation data to determine whether to transition from an existing manufacturing technique to the selected lean manufacturing technique.

An evaluation of automatic coronary artery calcium scoring methods with cardiac CT using the orCaScore framework.

Science.gov (United States)

Wolterink, Jelmer M; Leiner, Tim; de Vos, Bob D; Coatrieux, Jean-Louis; Kelm, B Michael; Kondo, Satoshi; Salgado, Rodrigo A; Shahzad, Rahil; Shu, Huazhong; Snoeren, Miranda; Takx, Richard A P; van Vliet, Lucas J; van Walsum, Theo; Willems, Tineke P; Yang, Guanyu; Zheng, Yefeng; Viergever, Max A; Išgum, Ivana

2016-05-01

The amount of coronary artery calcification (CAC) is a strong and independent predictor of cardiovascular disease (CVD) events. In clinical practice, CAC is manually identified and automatically quantified in cardiac CT using commercially available software. This is a tedious and time-consuming process in large-scale studies. Therefore, a number of automatic methods that require no interaction and semiautomatic methods that require very limited interaction for the identification of CAC in cardiac CT have been proposed. Thus far, a comparison of their performance has been lacking. The objective of this study was to perform an independent evaluation of (semi)automatic methods for CAC scoring in cardiac CT using a publicly available standardized framework. Cardiac CT exams of 72 patients distributed over four CVD risk categories were provided for (semi)automatic CAC scoring. Each exam consisted of a noncontrast-enhanced calcium scoring CT (CSCT) and a corresponding coronary CT angiography (CCTA) scan. The exams were acquired in four different hospitals using state-of-the-art equipment from four major CT scanner vendors. The data were divided into 32 training exams and 40 test exams. A reference standard for CAC in CSCT was defined by consensus of two experts following a clinical protocol. The framework organizers evaluated the performance of (semi)automatic methods on test CSCT scans, per lesion, artery, and patient. Five (semi)automatic methods were evaluated. Four methods used both CSCT and CCTA to identify CAC, and one method used only CSCT. The evaluated methods correctly detected between 52% and 94% of CAC lesions with positive predictive values between 65% and 96%. Lesions in distal coronary arteries were most commonly missed and aortic calcifications close to the coronary ostia were the most common false positive errors. The majority (between 88% and 98%) of correctly identified CAC lesions were assigned to the correct artery. Linearly weighted Cohen's kappa

Manual versus automatic bladder wall thickness measurements: a method comparison study

NARCIS (Netherlands)

Oelke, M.; Mamoulakis, C.; Ubbink, D.T.; de la Rosette, J.J.; Wijkstra, H.

2009-01-01

Purpose To compare repeatability and agreement of conventional ultrasound bladder wall thickness (BWT) measurements with automatically obtained BWT measurements by the BVM 6500 device. Methods Adult patients with lower urinary tract symptoms, urinary incontinence, or postvoid residual urine were

The development of an automatic scanning method for CR-39 neutron dosimeter

International Nuclear Information System (INIS)

Tawara, Hiroko; Miyajima, Mitsuhiro; Sasaki, Shin-ichi; Hozumi, Ken-ichi

1989-01-01

A method of measuring low level neutron dose has been developed with CR-39 track detectors using an automatic scanning system. It is composed of the optical microscope with a video camera, an image processor and a personal computer. The focus point of the microscope and the X-Y stage are controlled from the computer. The minimum detectable neutron dose is estimated at 4.6 mrem in the uniform field of neutron with equivalent energy spectrum to Am-Be source from the results of automatic measurements. (author)

Applications of automatic differentiation in computational fluid dynamics

Science.gov (United States)

Green, Lawrence L.; Carle, A.; Bischof, C.; Haigler, Kara J.; Newman, Perry A.

1994-01-01

Automatic differentiation (AD) is a powerful computational method that provides for computing exact sensitivity derivatives (SD) from existing computer programs for multidisciplinary design optimization (MDO) or in sensitivity analysis. A pre-compiler AD tool for FORTRAN programs called ADIFOR has been developed. The ADIFOR tool has been easily and quickly applied by NASA Langley researchers to assess the feasibility and computational impact of AD in MDO with several different FORTRAN programs. These include a state-of-the-art three dimensional multigrid Navier-Stokes flow solver for wings or aircraft configurations in transonic turbulent flow. With ADIFOR the user specifies sets of independent and dependent variables with an existing computer code. ADIFOR then traces the dependency path throughout the code, applies the chain rule to formulate derivative expressions, and generates new code to compute the required SD matrix. The resulting codes have been verified to compute exact non-geometric and geometric SD for a variety of cases. in less time than is required to compute the SD matrix using centered divided differences.

Methods and computer codes for probabilistic sensitivity and uncertainty analysis

International Nuclear Information System (INIS)

Vaurio, J.K.

1985-01-01

This paper describes the methods and applications experience with two computer codes that are now available from the National Energy Software Center at Argonne National Laboratory. The purpose of the SCREEN code is to identify a group of most important input variables of a code that has many (tens, hundreds) input variables with uncertainties, and do this without relying on judgment or exhaustive sensitivity studies. Purpose of the PROSA-2 code is to propagate uncertainties and calculate the distributions of interesting output variable(s) of a safety analysis code using response surface techniques, based on the same runs used for screening. Several applications are discussed, but the codes are generic, not tailored to any specific safety application code. They are compatible in terms of input/output requirements but also independent of each other, e.g., PROSA-2 can be used without first using SCREEN if a set of important input variables has first been selected by other methods. Also, although SCREEN can select cases to be run (by random sampling), a user can select cases by other methods if he so prefers, and still use the rest of SCREEN for identifying important input variables

Code Differentiation for Hydrodynamic Model Optimization

Energy Technology Data Exchange (ETDEWEB)

Henninger, R.J.; Maudlin, P.J.

1999-06-27

Use of a hydrodynamics code for experimental data fitting purposes (an optimization problem) requires information about how a computed result changes when the model parameters change. These so-called sensitivities provide the gradient that determines the search direction for modifying the parameters to find an optimal result. Here, the authors apply code-based automatic differentiation (AD) techniques applied in the forward and adjoint modes to two problems with 12 parameters to obtain these gradients and compare the computational efficiency and accuracy of the various methods. They fit the pressure trace from a one-dimensional flyer-plate experiment and examine the accuracy for a two-dimensional jet-formation problem. For the flyer-plate experiment, the adjoint mode requires similar or less computer time than the forward methods. Additional parameters will not change the adjoint mode run time appreciably, which is a distinct advantage for this method. Obtaining ''accurate'' sensitivities for the j et problem parameters remains problematic.

2D arc-PIC code description: methods and documentation

CERN Document Server

Timko, Helga

2011-01-01

Vacuum discharges are one of the main limiting factors for future linear collider designs such as that of the Compact LInear Collider. To optimize machine efficiency, maintaining the highest feasible accelerating gradient below a certain breakdown rate is desirable; understanding breakdowns can therefore help us to achieve this goal. As a part of ongoing theoretical research on vacuum discharges at the Helsinki Institute of Physics, the build-up of plasma can be investigated through the particle-in-cell method. For this purpose, we have developed the 2D Arc-PIC code introduced here. We present an exhaustive description of the 2D Arc-PIC code in two parts. In the first part, we introduce the particle-in-cell method in general and detail the techniques used in the code. In the second part, we provide a documentation and derivation of the key equations occurring in the code. The code is original work of the author, written in 2010, and is therefore under the copyright of the author. The development of the code h...

An automatic rat brain extraction method based on a deformable surface model.

Science.gov (United States)

Li, Jiehua; Liu, Xiaofeng; Zhuo, Jiachen; Gullapalli, Rao P; Zara, Jason M

2013-08-15

The extraction of the brain from the skull in medical images is a necessary first step before image registration or segmentation. While pre-clinical MR imaging studies on small animals, such as rats, are increasing, fully automatic imaging processing techniques specific to small animal studies remain lacking. In this paper, we present an automatic rat brain extraction method, the Rat Brain Deformable model method (RBD), which adapts the popular human brain extraction tool (BET) through the incorporation of information on the brain geometry and MR image characteristics of the rat brain. The robustness of the method was demonstrated on T2-weighted MR images of 64 rats and compared with other brain extraction methods (BET, PCNN, PCNN-3D). The results demonstrate that RBD reliably extracts the rat brain with high accuracy (>92% volume overlap) and is robust against signal inhomogeneity in the images. Copyright © 2013 Elsevier B.V. All rights reserved.

Diagnosis - Using automatic test equipment and artificial intelligence expert systems

Science.gov (United States)

Ramsey, J. E., Jr.

Three expert systems (ATEOPS, ATEFEXPERS, and ATEFATLAS), which were created to direct automatic test equipment (ATE), are reviewed. The purpose of the project was to develop an expert system to troubleshoot the converter-programmer power supply card for the F-15 aircraft and have that expert system direct the automatic test equipment. Each expert system uses a different knowledge base or inference engine, basing the testing on the circuit schematic, test requirements document, or ATLAS code. Implementing generalized modules allows the expert systems to be used for any different unit under test. Using converted ATLAS to LISP code allows the expert system to direct any ATE using ATLAS. The constraint propagated frame system allows for the expansion of control by creating the ATLAS code, checking the code for good software engineering techniques, directing the ATE, and changing the test sequence as needed (planning).

Automatically Preparing Safe SQL Queries

Science.gov (United States)

Bisht, Prithvi; Sistla, A. Prasad; Venkatakrishnan, V. N.

We present the first sound program source transformation approach for automatically transforming the code of a legacy web application to employ PREPARE statements in place of unsafe SQL queries. Our approach therefore opens the way for eradicating the SQL injection threat vector from legacy web applications.

Computer program for automatic generation of BWR control rod patterns

International Nuclear Information System (INIS)

Taner, M.S.; Levine, S.H.; Hsia, M.Y.

1990-01-01

A computer program named OCTOPUS has been developed to automatically determine a control rod pattern that approximates some desired target power distribution as closely as possible without violating any thermal safety or reactor criticality constraints. The program OCTOPUS performs a semi-optimization task based on the method of approximation programming (MAP) to develop control rod patterns. The SIMULATE-E code is used to determine the nucleonic characteristics of the reactor core state

A Method for Modeling the Virtual Instrument Automatic Test System Based on the Petri Net

Institute of Scientific and Technical Information of China (English)

MA Min; CHEN Guang-ju

2005-01-01

Virtual instrument is playing the important role in automatic test system. This paper introduces a composition of a virtual instrument automatic test system and takes the VXIbus based a test software platform which is developed by CAT lab of the UESTC as an example. Then a method to model this system based on Petri net is proposed. Through this method, we can analyze the test task scheduling to prevent the deadlock or resources conflict. At last, this paper analyzes the feasibility of this method.

A method for scientific code coupling in a distributed environment; Une methodologie pour le couplage de codes scientifiques en environnement distribue

Energy Technology Data Exchange (ETDEWEB)

Caremoli, C; Beaucourt, D; Chen, O; Nicolas, G; Peniguel, C; Rascle, P; Richard, N; Thai Van, D; Yessayan, A

1994-12-01

This guide book deals with coupling of big scientific codes. First, the context is introduced: big scientific codes devoted to a specific discipline coming to maturity, and more and more needs in terms of multi discipline studies. Then we describe different kinds of code coupling and an example of code coupling: 3D thermal-hydraulic code THYC and 3D neutronics code COCCINELLE. With this example we identify problems to be solved to realize a coupling. We present the different numerical methods usable for the resolution of coupling terms. This leads to define two kinds of coupling: with the leak coupling, we can use explicit methods, and with the strong coupling we need to use implicit methods. On both cases, we analyze the link with the way of parallelizing code. For translation of data from one code to another, we define the notion of Standard Coupling Interface based on a general structure for data. This general structure constitutes an intermediary between the codes, thus allowing a relative independence of the codes from a specific coupling. The proposed method for the implementation of a coupling leads to a simultaneous run of the different codes, while they exchange data. Two kinds of data communication with message exchange are proposed: direct communication between codes with the use of PVM product (Parallel Virtual Machine) and indirect communication with a coupling tool. This second way, with a general code coupling tool, is based on a coupling method, and we strongly recommended to use it. This method is based on the two following principles: re-usability, that means few modifications on existing codes, and definition of a code usable for coupling, that leads to separate the design of a code usable for coupling from the realization of a specific coupling. This coupling tool available from beginning of 1994 is described in general terms. (authors). figs., tabs.

Statistical Methods in Assembly Quality Management of Multi-Element Products on Automatic Rotor Lines

Science.gov (United States)

Pries, V. V.; Proskuriakov, N. E.

2018-04-01

To control the assembly quality of multi-element mass-produced products on automatic rotor lines, control methods with operational feedback are required. However, due to possible failures in the operation of the devices and systems of automatic rotor line, there is always a real probability of getting defective (incomplete) products into the output process stream. Therefore, a continuous sampling control of the products completeness, based on the use of statistical methods, remains an important element in managing the quality of assembly of multi-element mass products on automatic rotor lines. The feature of continuous sampling control of the multi-element products completeness in the assembly process is its breaking sort, which excludes the possibility of returning component parts after sampling control to the process stream and leads to a decrease in the actual productivity of the assembly equipment. Therefore, the use of statistical procedures for continuous sampling control of the multi-element products completeness when assembled on automatic rotor lines requires the use of such sampling plans that ensure a minimum size of control samples. Comparison of the values of the limit of the average output defect level for the continuous sampling plan (CSP) and for the automated continuous sampling plan (ACSP) shows the possibility of providing lower limit values for the average output defects level using the ACSP-1. Also, the average sample size when using the ACSP-1 plan is less than when using the CSP-1 plan. Thus, the application of statistical methods in the assembly quality management of multi-element products on automatic rotor lines, involving the use of proposed plans and methods for continuous selective control, will allow to automating sampling control procedures and the required level of quality of assembled products while minimizing sample size.

Improvement in PWR automatic optimization reloading methods using genetic algorithm

International Nuclear Information System (INIS)

Levine, S.H.; Ivanov, K.; Feltus, M.

1996-01-01

The objective of using automatic optimized reloading methods is to provide the Nuclear Engineer with an efficient method for reloading a nuclear reactor which results in superior core configurations that minimize fuel costs. Previous methods developed by Levine et al required a large effort to develop the initial core loading using a priority loading scheme. Subsequent modifications to this core configuration were made using expert rules to produce the final core design. Improvements in this technique have been made by using a genetic algorithm to produce improved core reload designs for PWRs more efficiently (authors)

Improvement in PWR automatic optimization reloading methods using genetic algorithm

Energy Technology Data Exchange (ETDEWEB)

Levine, S H; Ivanov, K; Feltus, M [Pennsylvania State Univ., University Park, PA (United States)

1996-12-01

The objective of using automatic optimized reloading methods is to provide the Nuclear Engineer with an efficient method for reloading a nuclear reactor which results in superior core configurations that minimize fuel costs. Previous methods developed by Levine et al required a large effort to develop the initial core loading using a priority loading scheme. Subsequent modifications to this core configuration were made using expert rules to produce the final core design. Improvements in this technique have been made by using a genetic algorithm to produce improved core reload designs for PWRs more efficiently (authors).

Monte Carlo methods for shield design calculations

International Nuclear Information System (INIS)

Grimstone, M.J.

1974-01-01

A suite of Monte Carlo codes is being developed for use on a routine basis in commercial reactor shield design. The methods adopted for this purpose include the modular construction of codes, simplified geometries, automatic variance reduction techniques, continuous energy treatment of cross section data, and albedo methods for streaming. Descriptions are given of the implementation of these methods and of their use in practical calculations. 26 references. (U.S.)

Automatic differentiation tools in the dynamic simulation of chemical engineering processes

Directory of Open Access Journals (Sweden)

Castro M.C.

2000-01-01

Full Text Available Automatic Differentiation is a relatively recent technique developed for the differentiation of functions applicable directly to the source code to compute the function written in standard programming languages. That technique permits the automatization of the differentiation step, crucial for dynamic simulation and optimization of processes. The values for the derivatives obtained with AD are exact (to roundoff. The theoretical exactness of the AD comes from the fact that it uses the same rules of differentiation as in differential calculus, but these rules are applied to an algorithmic specification of the function rather than to a formula. The main purpose of this contribution is to discuss the impact of Automatic Differentiation in the field of dynamic simulation of chemical engineering processes. The influence of the differentiation technique on the behavior of the integration code, the performance of the generated code and the incorporation of AD tools in consistent initialization tools are discussed from the viewpoint of dynamic simulation of typical models in chemical engineering.

A Method for Improving the Progressive Image Coding Algorithms

Directory of Open Access Journals (Sweden)

Ovidiu COSMA

2014-12-01

Full Text Available This article presents a method for increasing the performance of the progressive coding algorithms for the subbands of images, by representing the coefficients with a code that reduces the truncation error.

Advanced codes and methods supporting improved fuel cycle economics - 5493

International Nuclear Information System (INIS)

Curca-Tivig, F.; Maupin, K.; Thareau, S.

2015-01-01

AREVA's code development program was practically completed in 2014. The basic codes supporting a new generation of advanced methods are the followings. GALILEO is a state-of-the-art fuel rod performance code for PWR and BWR applications. Development is completed, implementation started in France and the U.S.A. ARCADIA-1 is a state-of-the-art neutronics/ thermal-hydraulics/ thermal-mechanics code system for PWR applications. Development is completed, implementation started in Europe and in the U.S.A. The system thermal-hydraulic codes S-RELAP5 and CATHARE-2 are not really new but still state-of-the-art in the domain. S-RELAP5 was completely restructured and re-coded such that its life cycle increases by further decades. CATHARE-2 will be replaced in the future by the new CATHARE-3. The new AREVA codes and methods are largely based on first principles modeling with an extremely broad international verification and validation data base. This enables AREVA and its customers to access more predictable licensing processes in a fast evolving regulatory environment (new safety criteria, requests for enlarged qualification databases, statistical applications, uncertainty propagation...). In this context, the advanced codes and methods and the associated verification and validation represent the key to avoiding penalties on products, on operational limits, or on methodologies themselves

High-order space charge effects using automatic differentiation

International Nuclear Information System (INIS)

Reusch, Michael F.; Bruhwiler, David L.

1997-01-01

The Northrop Grumman Topkark code has been upgraded to Fortran 90, making use of operator overloading, so the same code can be used to either track an array of particles or construct a Taylor map representation of the accelerator lattice. We review beam optics and beam dynamics simulations conducted with TOPKARK in the past and we present a new method for modeling space charge forces to high-order with automatic differentiation. This method generates an accurate, high-order, 6-D Taylor map of the phase space variable trajectories for a bunched, high-current beam. The spatial distribution is modeled as the product of a Taylor Series times a Gaussian. The variables in the argument of the Gaussian are normalized to the respective second moments of the distribution. This form allows for accurate representation of a wide range of realistic distributions, including any asymmetries, and allows for rapid calculation of the space charge fields with free space boundary conditions. An example problem is presented to illustrate our approach

Colloid transport code-nuclear user's manual

International Nuclear Information System (INIS)

Jain, R.

1992-01-01

This report describes the CTCN computer code, designed to solve the equations of transient colloidal transport of radionuclides in porous and fractured media. This Fortran 77 package solves systems of coupled nonlinear differential equations with a wide range of boundary conditions. The package uses the Method of Lines technique with a special section which forms finite-difference discretizations in up to four spatial dimensions to automatically convert the system into a set of ordinary differential equations. The CTCN code then solves these equations using a robust, efficient ODE solver. Thus CTCN can be used to solve population balance equations along with the usual transport equations to model colloid transport processes or as a general problem solver to treat up to four-dimensional differential systems

New decoding methods of interleaved burst error-correcting codes

Science.gov (United States)

Nakano, Y.; Kasahara, M.; Namekawa, T.

1983-04-01

A probabilistic method of single burst error correction, using the syndrome correlation of subcodes which constitute the interleaved code, is presented. This method makes it possible to realize a high capability of burst error correction with less decoding delay. By generalizing this method it is possible to obtain probabilistic method of multiple (m-fold) burst error correction. After estimating the burst error positions using syndrome correlation of subcodes which are interleaved m-fold burst error detecting codes, this second method corrects erasure errors in each subcode and m-fold burst errors. The performance of these two methods is analyzed via computer simulation, and their effectiveness is demonstrated.

The impact of three discharge coding methods on the accuracy of diagnostic coding and hospital reimbursement for inpatient medical care.

Science.gov (United States)

Tsopra, Rosy; Peckham, Daniel; Beirne, Paul; Rodger, Kirsty; Callister, Matthew; White, Helen; Jais, Jean-Philippe; Ghosh, Dipansu; Whitaker, Paul; Clifton, Ian J; Wyatt, Jeremy C

2018-07-01

Coding of diagnoses is important for patient care, hospital management and research. However coding accuracy is often poor and may reflect methods of coding. This study investigates the impact of three alternative coding methods on the inaccuracy of diagnosis codes and hospital reimbursement. Comparisons of coding inaccuracy were made between a list of coded diagnoses obtained by a coder using (i)the discharge summary alone, (ii)case notes and discharge summary, and (iii)discharge summary with the addition of medical input. For each method, inaccuracy was determined for the primary, secondary diagnoses, Healthcare Resource Group (HRG) and estimated hospital reimbursement. These data were then compared with a gold standard derived by a consultant and coder. 107 consecutive patient discharges were analysed. Inaccuracy of diagnosis codes was highest when a coder used the discharge summary alone, and decreased significantly when the coder used the case notes (70% vs 58% respectively, p coded from the discharge summary with medical support (70% vs 60% respectively, p coding with case notes, and 35% for coding with medical support. The three coding methods resulted in an annual estimated loss of hospital remuneration of between £1.8 M and £16.5 M. The accuracy of diagnosis codes and percentage of correct HRGs improved when coders used either case notes or medical support in addition to the discharge summary. Further emphasis needs to be placed on improving the standard of information recorded in discharge summaries. Copyright © 2018 Elsevier B.V. All rights reserved.

Automatic optimized reload and depletion method for a pressurized water reactor

International Nuclear Information System (INIS)

Ahn, D.H.; Levene, S.H.

1985-01-01

A new method has been developed to automatically reload and deplete a pressurized water reactor (PWR) so that both the enriched inventory requirements during the reactor cycle and the cost of reloading the core are minimized. This is achieved through four stepwise optimization calculations: (a) determination of the minimum fuel requirement for an equivalent three-region core model, (b) optimal selection and allocation of fuel assemblies for each of the three regions to minimize the reload cost, (c) optimal placement of fuel assemblies to conserve regionwise optimal conditions, and (d) optimal control through poison management to deplete individual fuel assemblies to maximize end-of-cycle k /SUB eff/ . The new method differs from previous methods in that the optimization process automatically performs all tasks required to reload and deplete a PWR. In addition, the previous work that developed optimization methods principally for the initial reactor cycle was modified to handle subsequent cycles with fuel assemblies having burnup at beginning of cycle. Application of the method to the fourth reactor cycle at Three Mile Island Unit 1 has shown that both the enrichment and the number of fresh reload fuel assemblies can be decreased and fully amortized fuel assemblies can be reused to minimize the fuel cost of the reactor

Semi-Automatic Rating Method for Neutrophil Alkaline Phosphatase Activity.

Science.gov (United States)

Sugano, Kanae; Hashi, Kotomi; Goto, Misaki; Nishi, Kiyotaka; Maeda, Rie; Kono, Keigo; Yamamoto, Mai; Okada, Kazunori; Kaga, Sanae; Miwa, Keiko; Mikami, Taisei; Masauzi, Nobuo

2017-01-01

The neutrophil alkaline phosphatase (NAP) score is a valuable test for the diagnosis of myeloproliferative neoplasms, but it has still manually rated. Therefore, we developed a semi-automatic rating method using Photoshop ® and Image-J, called NAP-PS-IJ. Neutrophil alkaline phosphatase staining was conducted with Tomonaga's method to films of peripheral blood taken from three healthy volunteers. At least 30 neutrophils with NAP scores from 0 to 5+ were observed and taken their images. From which the outer part of neutrophil was removed away with Image-J. These were binarized with two different procedures (P1 and P2) using Photoshop ® . NAP-positive area (NAP-PA) and granule (NAP-PGC) were measured and counted with Image-J. The NAP-PA in images binarized with P1 significantly (P < 0.05) differed between images with NAP scores from 0 to 3+ (group 1) and those from 4+ to 5+ (group 2). The original images in group 1 were binarized with P2. NAP-PGC of them significantly (P < 0.05) differed among all four NAP score groups. The mean NAP-PGC with NAP-PS-IJ indicated a good correlation (r = 0.92, P < 0.001) to results by human examiners. The sensitivity and specificity of NAP-PS-IJ were 60% and 92%, which might be considered as a prototypic method for the full-automatic rating NAP score. © 2016 Wiley Periodicals, Inc.

Statistical methods for accurately determining criticality code bias

International Nuclear Information System (INIS)

Trumble, E.F.; Kimball, K.D.

1997-01-01

A system of statistically treating validation calculations for the purpose of determining computer code bias is provided in this paper. The following statistical treatments are described: weighted regression analysis, lower tolerance limit, lower tolerance band, and lower confidence band. These methods meet the criticality code validation requirements of ANS 8.1. 8 refs., 5 figs., 4 tabs

Semi-automatic version of the potentiometric titration method for characterization of uranium compounds

International Nuclear Information System (INIS)

Cristiano, Bárbara F.G.; Delgado, José Ubiratan; Wanderley S da Silva, José; Barros, Pedro D. de; Araújo, Radier M.S. de; Dias, Fábio C.; Lopes, Ricardo T.

2012-01-01

The potentiometric titration method was used for characterization of uranium compounds to be applied in intercomparison programs. The method is applied with traceability assured using a potassium dichromate primary standard. A semi-automatic version was developed to reduce the analysis time and the operator variation. The standard uncertainty in determining the total concentration of uranium was around 0.01%, which is suitable for uranium characterization and compatible with those obtained by manual techniques. - Highlights: ► A semi-automatic potentiometric titration method was developed for U charaterization. ► K 2 Cr 2 O 7 was the only certified reference material used. ► Values obtained for U 3 O 8 samples were consistent with certified. ► Uncertainty of 0.01% was useful for characterization and intercomparison program.

A new method for automatic discontinuity traces sampling on rock mass 3D model

Science.gov (United States)

Umili, G.; Ferrero, A.; Einstein, H. H.

2013-02-01

A new automatic method for discontinuity traces mapping and sampling on a rock mass digital model is described in this work. The implemented procedure allows one to automatically identify discontinuity traces on a Digital Surface Model: traces are detected directly as surface breaklines, by means of maximum and minimum principal curvature values of the vertices that constitute the model surface. Color influence and user errors, that usually characterize the trace mapping on images, are eliminated. Also trace sampling procedures based on circular windows and circular scanlines have been implemented: they are used to infer trace data and to calculate values of mean trace length, expected discontinuity diameter and intensity of rock discontinuities. The method is tested on a case study: results obtained applying the automatic procedure on the DSM of a rock face are compared to those obtained performing a manual sampling on the orthophotograph of the same rock face.

Development of burnup methods and capabilities in Monte Carlo code RMC

International Nuclear Information System (INIS)

She, Ding; Liu, Yuxuan; Wang, Kan; Yu, Ganglin; Forget, Benoit; Romano, Paul K.; Smith, Kord

2013-01-01

Highlights: ► The RMC code has been developed aiming at large-scale burnup calculations. ► Matrix exponential methods are employed to solve the depletion equations. ► The Energy-Bin method reduces the time expense of treating ACE libraries. ► The Cell-Mapping method is efficient to handle massive amounts of tally cells. ► Parallelized depletion is necessary for massive amounts of burnup regions. -- Abstract: The Monte Carlo burnup calculation has always been a challenging problem because of its large time consumption when applied to full-scale assembly or core calculations, and thus its application in routine analysis is limited. Most existing MC burnup codes are usually external wrappers between a MC code, e.g. MCNP, and a depletion code, e.g. ORIGEN. The code RMC is a newly developed MC code with an embedded depletion module aimed at performing burnup calculations of large-scale problems with high efficiency. Several measures have been taken to strengthen the burnup capabilities of RMC. Firstly, an accurate and efficient depletion module called DEPTH has been developed and built in, which employs the rational approximation and polynomial approximation methods. Secondly, the Energy-Bin method and the Cell-Mapping method are implemented to speed up the transport calculations with large numbers of nuclides and tally cells. Thirdly, the batch tally method and the parallelized depletion module have been utilized to better handle cases with massive amounts of burnup regions in parallel calculations. Burnup cases including a PWR pin and a 5 × 5 assembly group are calculated, thereby demonstrating the burnup capabilities of the RMC code. In addition, the computational time and memory requirements of RMC are compared with other MC burnup codes.

A Plant Control Technology Using Reinforcement Learning Method with Automatic Reward Adjustment

Science.gov (United States)

Eguchi, Toru; Sekiai, Takaaki; Yamada, Akihiro; Shimizu, Satoru; Fukai, Masayuki

A control technology using Reinforcement Learning (RL) and Radial Basis Function (RBF) Network has been developed to reduce environmental load substances exhausted from power and industrial plants. This technology consists of the statistic model using RBF Network, which estimates characteristics of plants with respect to environmental load substances, and RL agent, which learns the control logic for the plants using the statistic model. In this technology, it is necessary to design an appropriate reward function given to the agent immediately according to operation conditions and control goals to control plants flexibly. Therefore, we propose an automatic reward adjusting method of RL for plant control. This method adjusts the reward function automatically using information of the statistic model obtained in its learning process. In the simulations, it is confirmed that the proposed method can adjust the reward function adaptively for several test functions, and executes robust control toward the thermal power plant considering the change of operation conditions and control goals.

Development and application of methods to characterize code uncertainty

International Nuclear Information System (INIS)

Wilson, G.E.; Burtt, J.D.; Case, G.S.; Einerson, J.J.; Hanson, R.G.

1985-01-01

The United States Nuclear Regulatory Commission sponsors both international and domestic studies to assess its safety analysis codes. The Commission staff intends to use the results of these studies to quantify the uncertainty of the codes with a statistically based analysis method. Development of the methodology is underway. The Idaho National Engineering Laboratory contributions to the early development effort, and testing of two candidate methods are the subjects of this paper

ACIR: automatic cochlea image registration

Science.gov (United States)

Al-Dhamari, Ibraheem; Bauer, Sabine; Paulus, Dietrich; Lissek, Friedrich; Jacob, Roland

2017-02-01

Efficient Cochlear Implant (CI) surgery requires prior knowledge of the cochlea's size and its characteristics. This information helps to select suitable implants for different patients. To get these measurements, a segmentation method of cochlea medical images is needed. An important pre-processing step for good cochlea segmentation involves efficient image registration. The cochlea's small size and complex structure, in addition to the different resolutions and head positions during imaging, reveals a big challenge for the automated registration of the different image modalities. In this paper, an Automatic Cochlea Image Registration (ACIR) method for multi- modal human cochlea images is proposed. This method is based on using small areas that have clear structures from both input images instead of registering the complete image. It uses the Adaptive Stochastic Gradient Descent Optimizer (ASGD) and Mattes's Mutual Information metric (MMI) to estimate 3D rigid transform parameters. The use of state of the art medical image registration optimizers published over the last two years are studied and compared quantitatively using the standard Dice Similarity Coefficient (DSC). ACIR requires only 4.86 seconds on average to align cochlea images automatically and to put all the modalities in the same spatial locations without human interference. The source code is based on the tool elastix and is provided for free as a 3D Slicer plugin. Another contribution of this work is a proposed public cochlea standard dataset which can be downloaded for free from a public XNAT server.

Method of laser beam coding for control systems

Science.gov (United States)

Pałys, Tomasz; Arciuch, Artur; Walczak, Andrzej; Murawski, Krzysztof

2017-08-01

The article presents the method of encoding a laser beam for control systems. The experiments were performed using a red laser emitting source with a wavelength of λ = 650 nm and a power of P ≍ 3 mW. The aim of the study was to develop methods of modulation and demodulation of the laser beam. Results of research, in which we determined the effect of selected camera parameters, such as image resolution, number of frames per second on the result of demodulation of optical signal, is also shown in the paper. The experiments showed that the adopted coding method provides sufficient information encoded in a single laser beam (36 codes with the effectiveness of decoding at 99.9%).

The Automatic Parallelisation of Scientific Application Codes Using a Computer Aided Parallelisation Toolkit

Science.gov (United States)

Ierotheou, C.; Johnson, S.; Leggett, P.; Cross, M.; Evans, E.; Jin, Hao-Qiang; Frumkin, M.; Yan, J.; Biegel, Bryan (Technical Monitor)

2001-01-01

The shared-memory programming model is a very effective way to achieve parallelism on shared memory parallel computers. Historically, the lack of a programming standard for using directives and the rather limited performance due to scalability have affected the take-up of this programming model approach. Significant progress has been made in hardware and software technologies, as a result the performance of parallel programs with compiler directives has also made improvements. The introduction of an industrial standard for shared-memory programming with directives, OpenMP, has also addressed the issue of portability. In this study, we have extended the computer aided parallelization toolkit (developed at the University of Greenwich), to automatically generate OpenMP based parallel programs with nominal user assistance. We outline the way in which loop types are categorized and how efficient OpenMP directives can be defined and placed using the in-depth interprocedural analysis that is carried out by the toolkit. We also discuss the application of the toolkit on the NAS Parallel Benchmarks and a number of real-world application codes. This work not only demonstrates the great potential of using the toolkit to quickly parallelize serial programs but also the good performance achievable on up to 300 processors for hybrid message passing and directive-based parallelizations.

The adjoint sensitivity method, a contribution to the code uncertainty evaluation

International Nuclear Information System (INIS)

Ounsy, A.; Crecy, F. de; Brun, B.

1993-01-01

The application of the ASM (Adjoint Sensitivity Method) to thermohydraulic codes, is examined. The advantage of the method is to be very few CPU time consuming in comparison with usual approach requiring one complete code run per sensitivity determination. The mathematical aspects of the problem are first described, and the applicability of the method of the functional-type response of a thermalhydraulic model is demonstrated. On a simple example of non linear hyperbolic equation (Burgers equation) the problem has been analyzed. It is shown that the formalism used in the literature treating this subject is not appropriate. A new mathematical formalism circumventing the problem is proposed. For the discretized form of the problem, two methods are possible: the Continuous ASM and the Discrete ASM. The equivalence of both methods is demonstrated; nevertheless only the DASM constitutes a practical solution for thermalhydraulic codes. The application of the DASM to the thermalhydraulic safety code CATHARE is then presented for two examples. They demonstrate that ASM constitutes an efficient tool for the analysis of code sensitivity. (authors) 7 figs., 5 tabs., 8 refs

The adjoint sensitivity method. A contribution to the code uncertainty evaluation

International Nuclear Information System (INIS)

Ounsy, A.; Brun, B.

1993-01-01

The application of the ASM (Adjoint Sensitivity Method) to thermohydraulic codes, is examined. The advantage of the method is to be very few CPU time consuming in comparison with usual approach requiring one complete code run per sensitivity determination. The mathematical aspects of the problem are first described, and the applicability of the method of the functional-type response of a thermalhydraulic model is demonstrated. On a simple example of non linear hyperbolic equation (Burgers equation) the problem has been analyzed. It is shown that the formalism used in the literature treating this subject is not appropriate. A new mathematical formalism circumventing the problem is proposed. For the discretized form of the problem, two methods are possible: the Continuous ASM and the Discrete ASM. The equivalence of both methods is demonstrated; nevertheless only the DASM constitutes a practical solution for thermalhydraulic codes. The application of the DASM to the thermalhydraulic safety code CATHARE is then presented for two examples. They demonstrate that ASM constitutes an efficient tool for the analysis of code sensitivity. (authors) 7 figs., 5 tabs., 8 refs

The adjoint sensitivity method. A contribution to the code uncertainty evaluation

Energy Technology Data Exchange (ETDEWEB)

Ounsy, A; Brun, B

1994-12-31

The application of the ASM (Adjoint Sensitivity Method) to thermohydraulic codes, is examined. The advantage of the method is to be very few CPU time consuming in comparison with usual approach requiring one complete code run per sensitivity determination. The mathematical aspects of the problem are first described, and the applicability of the method of the functional-type response of a thermalhydraulic model is demonstrated. On a simple example of non linear hyperbolic equation (Burgers equation) the problem has been analyzed. It is shown that the formalism used in the literature treating this subject is not appropriate. A new mathematical formalism circumventing the problem is proposed. For the discretized form of the problem, two methods are possible: the Continuous ASM and the Discrete ASM. The equivalence of both methods is demonstrated; nevertheless only the DASM constitutes a practical solution for thermalhydraulic codes. The application of the DASM to the thermalhydraulic safety code CATHARE is then presented for two examples. They demonstrate that ASM constitutes an efficient tool for the analysis of code sensitivity. (authors) 7 figs., 5 tabs., 8 refs.

The adjoint sensitivity method, a contribution to the code uncertainty evaluation

Energy Technology Data Exchange (ETDEWEB)

Ounsy, A; Crecy, F de; Brun, B

1994-12-31

The application of the ASM (Adjoint Sensitivity Method) to thermohydraulic codes, is examined. The advantage of the method is to be very few CPU time consuming in comparison with usual approach requiring one complete code run per sensitivity determination. The mathematical aspects of the problem are first described, and the applicability of the method of the functional-type response of a thermalhydraulic model is demonstrated. On a simple example of non linear hyperbolic equation (Burgers equation) the problem has been analyzed. It is shown that the formalism used in the literature treating this subject is not appropriate. A new mathematical formalism circumventing the problem is proposed. For the discretized form of the problem, two methods are possible: the Continuous ASM and the Discrete ASM. The equivalence of both methods is demonstrated; nevertheless only the DASM constitutes a practical solution for thermalhydraulic codes. The application of the DASM to the thermalhydraulic safety code CATHARE is then presented for two examples. They demonstrate that ASM constitutes an efficient tool for the analysis of code sensitivity. (authors) 7 figs., 5 tabs., 8 refs.

Lightning Protection Performance Assessment of Transmission Line Based on ATP model Automatic Generation

Directory of Open Access Journals (Sweden)

Luo Hanwu

2016-01-01

Full Text Available This paper presents a novel method to solve the initial lightning breakdown current by combing ATP and MATLAB simulation software effectively, with the aims to evaluate the lightning protection performance of transmission line. Firstly, the executable ATP simulation model is generated automatically according to the required information such as power source parameters, tower parameters, overhead line parameters, grounding resistance and lightning current parameters, etc. through an interface program coded by MATLAB. Then, the data are extracted from the generated LIS files which can be obtained by executing the ATP simulation model, the occurrence of transmission lie breakdown can be determined by the relative data in LIS file. The lightning current amplitude should be reduced when the breakdown occurs, and vice the verse. Thus the initial lightning breakdown current of a transmission line with given parameters can be determined accurately by continuously changing the lightning current amplitude, which is realized by a loop computing algorithm that is coded by MATLAB software. The method proposed in this paper can generate the ATP simulation program automatically, and facilitates the lightning protection performance assessment of transmission line.

Bones : an automatic skeleton-based C-to-CUDA compiler for GPUs

NARCIS (Netherlands)

Nugteren, C.; Corporaal, H.

2014-01-01

The shift toward parallel processor architectures has made programming and code generation increasingly challenging. To address this programmability challenge, this article presents a technique to fully automatically generate efficient and readable code for parallel processors (with a focus on

TUTANK a two-dimensional neutron kinetics code

International Nuclear Information System (INIS)

Watts, M.G.; Halsall, M.J.; Fayers, F.J.

1975-04-01

TUTANK is a two-dimensional neutron kinetics code which treats two neutron energy groups and up to six groups of delayed neutron precursors. A 'theta differencing' method is used to integrate the time dependence of the equations. A position dependent exponential transformation on the time variable is available as an option, which in many circumstances can remove much of the time dependence, and thereby allow longer time steps to be taken. A further manipulation is made to separate the solutions of the neutron fluxes and the precursor concentrations. The spatial equations are based on standard diffusion theory, and their solution is obtained from alternating direction sweeps with a transverse buckling - the so-called ADI-B 2 method. Other features of the code include an elementary temperature feedback and heat removal treatment, automatic time step adjustment, a flexible method of specifying cross-section and heat transfer coefficient variations during a transient, and a restart facility which requires a minimal data specification. Full details of the code input are given. An example of the solution of a NEACRP benchmark for an LWR control rod withdrawal is given. (author)

Improvement of remote control system of automatic ultrasonic equipment for inspection of reactor pressure vessel

International Nuclear Information System (INIS)

Cheong, Yong Moo; Jung, H. K.; Joo, Y. S.; Koo, K. M.; Hyung, H.; Sim, C. M.; Gong, U. S.; Kim, S. H.; Lee, J. P.; Rhoo, H. C.; Kim, M. S.; Ryoo, S. K.; Choi, C. H.; Oh, K. I.

1999-12-01

One of the important issues related to the nuclear safety is in-service inspection of reactor pressure vessel (RPV). A remote controlled automatic ultrasonic method is applied to the inspection. At present the automatic ultrasonic inspection system owned by KAERI is interrupted due to degradation of parts. In order to resume field inspection new remote control system for the equipment was designed and installed to the existing equipment. New ultrasonic sensors and their modules for RPV inspection were designed and fabricated in accordance with the new requirements of the inspection codes. Ultrasonic sensors were verified for the use in the RPV inspection. (author)

Transoptr-a second order beam transport design code with automatic internal optimization and general constraints

International Nuclear Information System (INIS)

Heighway, E.A.

1980-07-01

A second order beam transport design code with parametric optimization is described. The code analyzes the transport of charged particle beams through a user defined magnet system. The magnet system parameters are varied (within user defined limits) until the properties of the transported beam and/or the system transport matrix match those properties requested by the user. The code uses matrix formalism to represent the transport elements and optimization is achieved using the variable metric method. Any constraints that can be expressed algebraically may be included by the user as part of his design. Instruction in the use of the program is given. (auth)

Present status of transport code development based on Monte Carlo method

International Nuclear Information System (INIS)

Nakagawa, Masayuki

1985-01-01

The present status of development in Monte Carlo code is briefly reviewed. The main items are the followings; Application fields, Methods used in Monte Carlo code (geometry spectification, nuclear data, estimator and variance reduction technique) and unfinished works, Typical Monte Carlo codes and Merits of continuous energy Monte Carlo code. (author)

The adjoint sensitivity method, a contribution to the code uncertainty evaluation

International Nuclear Information System (INIS)

Ounsy, A.; Brun, B.; De Crecy, F.

1994-01-01

This paper deals with the application of the adjoint sensitivity method (ASM) to thermal hydraulic codes. The advantage of the method is to use small central processing unit time in comparison with the usual approach requiring one complete code run per sensitivity determination. In the first part the mathematical aspects of the problem are treated, and the applicability of the method of the functional-type response of a thermal hydraulic model is demonstrated. On a simple example of non-linear hyperbolic equation (Burgers equation) the problem has been analysed. It is shown that the formalism used in the literature treating this subject is not appropriate. A new mathematical formalism circumventing the problem is proposed. For the discretized form of the problem, two methods are possible: the continuous ASM and the discrete ASM. The equivalence of both methods is demonstrated; nevertheless only the discrete ASM constitutes a practical solution for thermal hydraulic codes. The application of the discrete ASM to the thermal hydraulic safety code CATHARE is then presented for two examples. They demonstrate that the discrete ASM constitutes an efficient tool for the analysis of code sensitivity. ((orig.))

Code of a Tokamak Fusion Energy Facility ITER

International Nuclear Information System (INIS)

Yasuhide Asada; Kenzo Miya; Kazuhiko Hada; Eisuke Tada

2002-01-01

The technical structural code for ITER (International Thermonuclear Experimental Fusion Reactor) and, as more generic applications, for D-T burning fusion power facilities (hereafter, Fusion Code) should be innovative because of their quite different features of safety and mechanical components from nuclear fission reactors, and the necessity of introducing several new fabrication and examination technologies. Introduction of such newly developed technologies as inspection-free automatic welding into the Fusion Code is rationalized by a pilot application of a new code concept of s ystem-based code for integrity . The code concept means an integration of element technical items necessary for construction, operation and maintenance of mechanical components of fusion power facilities into a single system to attain an optimization of the total margin of these components. Unique and innovative items of the Fusion Code are typically as follows: - Use of non-metals; - Cryogenic application; - New design margins on allowable stresses, and other new design rules; - Use of inspection-free automatic welding, and other newly developed fabrication technologies; - Graded approach of quality assurance standard to cover radiological safety-system components as well as non-safety-system components; - Consideration on replacement components. (authors)

New construction of quantum error-avoiding codes via group representation of quantum stabilizer codes

Energy Technology Data Exchange (ETDEWEB)

Xiao, Hailin [Wenzhou University, College of Physics and Electronic Information Engineering, Wenzhou (China); Southeast University, National Mobile Communications Research Laboratory, Nanjing (China); Guilin University of Electronic Technology, Ministry of Education, Key Laboratory of Cognitive Radio and Information Processing, Guilin (China); Zhang, Zhongshan [University of Science and Technology Beijing, Beijing Engineering and Technology Research Center for Convergence Networks and Ubiquitous Services, Beijing (China); Chronopoulos, Anthony Theodore [University of Texas at San Antonio, Department of Computer Science, San Antonio, TX (United States)

2017-10-15

In quantum computing, nice error bases as generalization of the Pauli basis were introduced by Knill. These bases are known to be projective representations of finite groups. In this paper, we propose a group representation approach to the study of quantum stabilizer codes. We utilize this approach to define decoherence-free subspaces (DFSs). Unlike previous studies of DFSs, this type of DFSs does not involve any spatial symmetry assumptions on the system-environment interaction. Thus, it can be used to construct quantum error-avoiding codes (QEACs) that are fault tolerant automatically. We also propose a new simple construction of QEACs and subsequently develop several classes of QEACs. Finally, we present numerical simulation results encoding the logical error rate over physical error rate on the fidelity performance of these QEACs. Our study demonstrates that DFSs-based QEACs are capable of providing a generalized and unified framework for error-avoiding methods. (orig.)

Colloid transport code-nuclear user`s manual

Energy Technology Data Exchange (ETDEWEB)

Jain, R. [New Mexico Univ., Albuquerque, NM (United States)

1992-04-03

This report describes the CTCN computer code, designed to solve the equations of transient colloidal transport of radionuclides in porous and fractured media. This Fortran 77 package solves systems of coupled nonlinear differential equations with a wide range of boundary conditions. The package uses the Method of Lines technique with a special section which forms finite-difference discretizations in up to four spatial dimensions to automatically convert the system into a set of ordinary differential equations. The CTCN code then solves these equations using a robust, efficient ODE solver. Thus CTCN can be used to solve population balance equations along with the usual transport equations to model colloid transport processes or as a general problem solver to treat up to four-dimensional differential systems.

Abstraction carrying code and resource-awareness

OpenAIRE

Hermenegildo, Manuel V.; Albert Albiol, Elvira; López García, Pedro; Puebla Sánchez, Alvaro Germán

2005-01-01

Proof-Carrying Code (PCC) is a general approach to mobile code safety in which the code supplier augments the program with a certifícate (or proof). The intended benefit is that the program consumer can locally validate the certifícate w.r.t. the "untrusted" program by means of a certifícate checker—a process which should be much simpler, eíñcient, and automatic than generating the original proof. Abstraction Carrying Code (ACC) is an enabling technology for PCC in which an abstract mod...

Method and device for decoding coded digital video signals

NARCIS (Netherlands)

2000-01-01

The invention relates to a video coding method and system including a quantization and coding sub-assembly (38) in which a quantization parameter is controlled by another parameter defined as being in direct relation with the dynamic range value of the data contained in given blocks of pixels.

Automatic differentiation bibliography

Energy Technology Data Exchange (ETDEWEB)

Corliss, G.F. [comp.

1992-07-01

This is a bibliography of work related to automatic differentiation. Automatic differentiation is a technique for the fast, accurate propagation of derivative values using the chain rule. It is neither symbolic nor numeric. Automatic differentiation is a fundamental tool for scientific computation, with applications in optimization, nonlinear equations, nonlinear least squares approximation, stiff ordinary differential equation, partial differential equations, continuation methods, and sensitivity analysis. This report is an updated version of the bibliography which originally appeared in Automatic Differentiation of Algorithms: Theory, Implementation, and Application.

Comparison of Document Index Graph Using TextRank and HITS Weighting Method in Automatic Text Summarization

Science.gov (United States)

Hadyan, Fadhlil; Shaufiah; Arif Bijaksana, Moch.

2017-01-01

Automatic summarization is a system that can help someone to take the core information of a long text instantly. The system can help by summarizing text automatically. there’s Already many summarization systems that have been developed at this time but there are still many problems in those system. In this final task proposed summarization method using document index graph. This method utilizes the PageRank and HITS formula used to assess the web page, adapted to make an assessment of words in the sentences in a text document. The expected outcome of this final task is a system that can do summarization of a single document, by utilizing document index graph with TextRank and HITS to improve the quality of the summary results automatically.

A novel automatic quantification method for high-content screening analysis of DNA double strand-break response.

Science.gov (United States)

Feng, Jingwen; Lin, Jie; Zhang, Pengquan; Yang, Songnan; Sa, Yu; Feng, Yuanming

2017-08-29

High-content screening is commonly used in studies of the DNA damage response. The double-strand break (DSB) is one of the most harmful types of DNA damage lesions. The conventional method used to quantify DSBs is γH2AX foci counting, which requires manual adjustment and preset parameters and is usually regarded as imprecise, time-consuming, poorly reproducible, and inaccurate. Therefore, a robust automatic alternative method is highly desired. In this manuscript, we present a new method for quantifying DSBs which involves automatic image cropping, automatic foci-segmentation and fluorescent intensity measurement. Furthermore, an additional function was added for standardizing the measurement of DSB response inhibition based on co-localization analysis. We tested the method with a well-known inhibitor of DSB response. The new method requires only one preset parameter, which effectively minimizes operator-dependent variations. Compared with conventional methods, the new method detected a higher percentage difference of foci formation between different cells, which can improve measurement accuracy. The effects of the inhibitor on DSB response were successfully quantified with the new method (p = 0.000). The advantages of this method in terms of reliability, automation and simplicity show its potential in quantitative fluorescence imaging studies and high-content screening for compounds and factors involved in DSB response.

A novel construction method of QC-LDPC codes based on CRT for optical communications

Science.gov (United States)

Yuan, Jian-guo; Liang, Meng-qi; Wang, Yong; Lin, Jin-zhao; Pang, Yu

2016-05-01

A novel construction method of quasi-cyclic low-density parity-check (QC-LDPC) codes is proposed based on Chinese remainder theory (CRT). The method can not only increase the code length without reducing the girth, but also greatly enhance the code rate, so it is easy to construct a high-rate code. The simulation results show that at the bit error rate ( BER) of 10-7, the net coding gain ( NCG) of the regular QC-LDPC(4 851, 4 546) code is respectively 2.06 dB, 1.36 dB, 0.53 dB and 0.31 dB more than those of the classic RS(255, 239) code in ITU-T G.975, the LDPC(32 640, 30 592) code in ITU-T G.975.1, the QC-LDPC(3 664, 3 436) code constructed by the improved combining construction method based on CRT and the irregular QC-LDPC(3 843, 3 603) code constructed by the construction method based on the Galois field ( GF( q)) multiplicative group. Furthermore, all these five codes have the same code rate of 0.937. Therefore, the regular QC-LDPC(4 851, 4 546) code constructed by the proposed construction method has excellent error-correction performance, and can be more suitable for optical transmission systems.

Modular code supervisor. Automatic generation of command language

International Nuclear Information System (INIS)

Dumas, M.; Thomas, J.B.

1988-01-01

It is shown how, starting from a problem formulated by the user, to generate the adequate calculation procedure in the command code, and acquire the data necessary for the calculation while verifying their validity. Modular codes are used, because of their flexibility and wide utilisation. Modules are written in Fortran, and calculations are done in batches according to an algorithm written in the GIBIANE command language. The action plans are based on the STRIPS and WARPLAN families. Elementary representation of a module and special instructions are illustrated. Dynamic construction macro-actions, and acquisition of the specification (which allows users to express the goal of a program without indicating which algorithm is used to reach the goal) are illustrated. The final phase consists in translating the algorithm into the command language [fr

High-order space charge effects using automatic differentiation

International Nuclear Information System (INIS)

Reusch, M.F.; Bruhwiler, D.L.; Computer Accelerator Physics Conference Williamsburg, Virginia 1996)

1997-01-01

The Northrop Grumman Topkark code has been upgraded to Fortran 90, making use of operator overloading, so the same code can be used to either track an array of particles or construct a Taylor map representation of the accelerator lattice. We review beam optics and beam dynamics simulations conducted with TOPKARK in the past and we present a new method for modeling space charge forces to high-order with automatic differentiation. This method generates an accurate, high-order, 6-D Taylor map of the phase space variable trajectories for a bunched, high-current beam. The spatial distribution is modeled as the product of a Taylor Series times a Gaussian. The variables in the argument of the Gaussian are normalized to the respective second moments of the distribution. This form allows for accurate representation of a wide range of realistic distributions, including any asymmetries, and allows for rapid calculation of the space charge fields with free space boundary conditions. An example problem is presented to illustrate our approach. copyright 1997 American Institute of Physics

Evaluation of an automatic MR-based gold fiducial marker localisation method for MR-only prostate radiotherapy

Science.gov (United States)

Maspero, Matteo; van den Berg, Cornelis A. T.; Zijlstra, Frank; Sikkes, Gonda G.; de Boer, Hans C. J.; Meijer, Gert J.; Kerkmeijer, Linda G. W.; Viergever, Max A.; Lagendijk, Jan J. W.; Seevinck, Peter R.

2017-10-01

An MR-only radiotherapy planning (RTP) workflow would reduce the cost, radiation exposure and uncertainties introduced by CT-MRI registrations. In the case of prostate treatment, one of the remaining challenges currently holding back the implementation of an RTP workflow is the MR-based localisation of intraprostatic gold fiducial markers (FMs), which is crucial for accurate patient positioning. Currently, MR-based FM localisation is clinically performed manually. This is sub-optimal, as manual interaction increases the workload. Attempts to perform automatic FM detection often rely on being able to detect signal voids induced by the FMs in magnitude images. However, signal voids may not always be sufficiently specific, hampering accurate and robust automatic FM localisation. Here, we present an approach that aims at automatic MR-based FM localisation. This method is based on template matching using a library of simulated complex-valued templates, and exploiting the behaviour of the complex MR signal in the vicinity of the FM. Clinical evaluation was performed on seventeen prostate cancer patients undergoing external beam radiotherapy treatment. Automatic MR-based FM localisation was compared to manual MR-based and semi-automatic CT-based localisation (the current gold standard) in terms of detection rate and the spatial accuracy and precision of localisation. The proposed method correctly detected all three FMs in 15/17 patients. The spatial accuracy (mean) and precision (STD) were 0.9 mm and 0.5 mm respectively, which is below the voxel size of 1.1 × 1.1 × 1.2 mm3 and comparable to MR-based manual localisation. FM localisation failed (3/51 FMs) in the presence of bleeding or calcifications in the direct vicinity of the FM. The method was found to be spatially accurate and precise, which is essential for clinical use. To overcome any missed detection, we envision the use of the proposed method along with verification by an observer. This will result in a

Evaluation of an automatic MR-based gold fiducial marker localisation method for MR-only prostate radiotherapy.

Science.gov (United States)

Maspero, Matteo; van den Berg, Cornelis A T; Zijlstra, Frank; Sikkes, Gonda G; de Boer, Hans C J; Meijer, Gert J; Kerkmeijer, Linda G W; Viergever, Max A; Lagendijk, Jan J W; Seevinck, Peter R

2017-10-03

An MR-only radiotherapy planning (RTP) workflow would reduce the cost, radiation exposure and uncertainties introduced by CT-MRI registrations. In the case of prostate treatment, one of the remaining challenges currently holding back the implementation of an RTP workflow is the MR-based localisation of intraprostatic gold fiducial markers (FMs), which is crucial for accurate patient positioning. Currently, MR-based FM localisation is clinically performed manually. This is sub-optimal, as manual interaction increases the workload. Attempts to perform automatic FM detection often rely on being able to detect signal voids induced by the FMs in magnitude images. However, signal voids may not always be sufficiently specific, hampering accurate and robust automatic FM localisation. Here, we present an approach that aims at automatic MR-based FM localisation. This method is based on template matching using a library of simulated complex-valued templates, and exploiting the behaviour of the complex MR signal in the vicinity of the FM. Clinical evaluation was performed on seventeen prostate cancer patients undergoing external beam radiotherapy treatment. Automatic MR-based FM localisation was compared to manual MR-based and semi-automatic CT-based localisation (the current gold standard) in terms of detection rate and the spatial accuracy and precision of localisation. The proposed method correctly detected all three FMs in 15/17 patients. The spatial accuracy (mean) and precision (STD) were 0.9 mm and 0.5 mm respectively, which is below the voxel size of [Formula: see text] mm 3 and comparable to MR-based manual localisation. FM localisation failed (3/51 FMs) in the presence of bleeding or calcifications in the direct vicinity of the FM. The method was found to be spatially accurate and precise, which is essential for clinical use. To overcome any missed detection, we envision the use of the proposed method along with verification by an observer. This will result in a

NATIONAL EXPERIENCES REGARDING CORPORATE GOVERNANCE PROPER PRACTICE CODES

Directory of Open Access Journals (Sweden)

Durgheu Liliana

2010-12-01

Full Text Available This paper is about the principles of proper governance codes, which even tough have blossomed in all parts of the world for more than a decade, the degree in which companies adopt the codes vary in different countries, and the decision to adopt a certain code does not automatically guarranty efficient corporate governance. The paper trys to identify the mechanisms needed for implementing the codes and that will lead to higher efficiency.

The OpenMOC method of characteristics neutral particle transport code

International Nuclear Information System (INIS)

Boyd, William; Shaner, Samuel; Li, Lulu; Forget, Benoit; Smith, Kord

2014-01-01

Highlights: • An open source method of characteristics neutron transport code has been developed. • OpenMOC shows nearly perfect scaling on CPUs and 30× speedup on GPUs. • Nonlinear acceleration techniques demonstrate a 40× reduction in source iterations. • OpenMOC uses modern software design principles within a C++ and Python framework. • Validation with respect to the C5G7 and LRA benchmarks is presented. - Abstract: The method of characteristics (MOC) is a numerical integration technique for partial differential equations, and has seen widespread use for reactor physics lattice calculations. The exponential growth in computing power has finally brought the possibility for high-fidelity full core MOC calculations within reach. The OpenMOC code is being developed at the Massachusetts Institute of Technology to investigate algorithmic acceleration techniques and parallel algorithms for MOC. OpenMOC is a free, open source code written using modern software languages such as C/C++ and CUDA with an emphasis on extensible design principles for code developers and an easy to use Python interface for code users. The present work describes the OpenMOC code and illustrates its ability to model large problems accurately and efficiently

A model based method for automatic facial expression recognition

NARCIS (Netherlands)

Kuilenburg, H. van; Wiering, M.A.; Uyl, M. den

2006-01-01

Automatic facial expression recognition is a research topic with interesting applications in the field of human-computer interaction, psychology and product marketing. The classification accuracy for an automatic system which uses static images as input is however largely limited by the image

A novel method of generating and remembering international morse codes

Digital Repository Service at National Institute of Oceanography (India)

Charyulu, R.J.K.

untethered communications have been advanced, despite as S.O.S International Morse Code will be at rescue as an emergency tool, when all other modes fail The details of hte method and actual codes have been enumerated....

Automated uncertainty analysis methods in the FRAP computer codes

International Nuclear Information System (INIS)

Peck, S.O.

1980-01-01

A user oriented, automated uncertainty analysis capability has been incorporated in the Fuel Rod Analysis Program (FRAP) computer codes. The FRAP codes have been developed for the analysis of Light Water Reactor fuel rod behavior during steady state (FRAPCON) and transient (FRAP-T) conditions as part of the United States Nuclear Regulatory Commission's Water Reactor Safety Research Program. The objective of uncertainty analysis of these codes is to obtain estimates of the uncertainty in computed outputs of the codes is to obtain estimates of the uncertainty in computed outputs of the codes as a function of known uncertainties in input variables. This paper presents the methods used to generate an uncertainty analysis of a large computer code, discusses the assumptions that are made, and shows techniques for testing them. An uncertainty analysis of FRAP-T calculated fuel rod behavior during a hypothetical loss-of-coolant transient is presented as an example and carried through the discussion to illustrate the various concepts

A Fast Optimization Method for General Binary Code Learning.

Science.gov (United States)

Shen, Fumin; Zhou, Xiang; Yang, Yang; Song, Jingkuan; Shen, Heng; Tao, Dacheng

2016-09-22

Hashing or binary code learning has been recognized to accomplish efficient near neighbor search, and has thus attracted broad interests in recent retrieval, vision and learning studies. One main challenge of learning to hash arises from the involvement of discrete variables in binary code optimization. While the widely-used continuous relaxation may achieve high learning efficiency, the pursued codes are typically less effective due to accumulated quantization error. In this work, we propose a novel binary code optimization method, dubbed Discrete Proximal Linearized Minimization (DPLM), which directly handles the discrete constraints during the learning process. Specifically, the discrete (thus nonsmooth nonconvex) problem is reformulated as minimizing the sum of a smooth loss term with a nonsmooth indicator function. The obtained problem is then efficiently solved by an iterative procedure with each iteration admitting an analytical discrete solution, which is thus shown to converge very fast. In addition, the proposed method supports a large family of empirical loss functions, which is particularly instantiated in this work by both a supervised and an unsupervised hashing losses, together with the bits uncorrelation and balance constraints. In particular, the proposed DPLM with a supervised `2 loss encodes the whole NUS-WIDE database into 64-bit binary codes within 10 seconds on a standard desktop computer. The proposed approach is extensively evaluated on several large-scale datasets and the generated binary codes are shown to achieve very promising results on both retrieval and classification tasks.

Applications of automatic differentiation in topology optimization

DEFF Research Database (Denmark)

Nørgaard, Sebastian A.; Sagebaum, Max; Gauger, Nicolas R.

2017-01-01

and is demonstrated on two separate, previously published types of problems in topology optimization. Two separate software packages for automatic differentiation, CoDiPack and Tapenade are considered, and their performance and usability trade-offs are discussed and compared to a hand coded adjoint gradient...

Evaluation of the efficiency and fault density of software generated by code generators

Science.gov (United States)

Schreur, Barbara

1993-01-01

Flight computers and flight software are used for GN&C (guidance, navigation, and control), engine controllers, and avionics during missions. The software development requires the generation of a considerable amount of code. The engineers who generate the code make mistakes and the generation of a large body of code with high reliability requires considerable time. Computer-aided software engineering (CASE) tools are available which generates code automatically with inputs through graphical interfaces. These tools are referred to as code generators. In theory, code generators could write highly reliable code quickly and inexpensively. The various code generators offer different levels of reliability checking. Some check only the finished product while some allow checking of individual modules and combined sets of modules as well. Considering NASA's requirement for reliability, an in house manually generated code is needed. Furthermore, automatically generated code is reputed to be as efficient as the best manually generated code when executed. In house verification is warranted.

Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models.

Science.gov (United States)

Mahony, Shaun; McInerney, James O; Smith, Terry J; Golden, Aaron

2004-03-05

Many current gene prediction methods use only one model to represent protein-coding regions in a genome, and so are less likely to predict the location of genes that have an atypical sequence composition. It is likely that future improvements in gene finding will involve the development of methods that can adequately deal with intra-genomic compositional variation. This work explores a new approach to gene-prediction, based on the Self-Organizing Map, which has the ability to automatically identify multiple gene models within a genome. The current implementation, named RescueNet, uses relative synonymous codon usage as the indicator of protein-coding potential. While its raw accuracy rate can be less than other methods, RescueNet consistently identifies some genes that other methods do not, and should therefore be of interest to gene-prediction software developers and genome annotation teams alike. RescueNet is recommended for use in conjunction with, or as a complement to, other gene prediction methods.

Improvement of remote control system of automatic ultrasonic equipment for inspection of reactor pressure vessel

Energy Technology Data Exchange (ETDEWEB)

Cheong, Yong Moo; Jung, H. K.; Joo, Y. S.; Koo, K. M.; Hyung, H.; Sim, C. M.; Gong, U. S.; Kim, S. H.; Lee, J. P.; Rhoo, H. C.; Kim, M. S.; Ryoo, S. K.; Choi, C. H.; Oh, K. I

1999-12-01

One of the important issues related to the nuclear safety is in-service inspection of reactor pressure vessel (RPV). A remote controlled automatic ultrasonic method is applied to the inspection. At present the automatic ultrasonic inspection system owned by KAERI is interrupted due to degradation of parts. In order to resume field inspection new remote control system for the equipment was designed and installed to the existing equipment. New ultrasonic sensors and their modules for RPV inspection were designed and fabricated in accordance with the new requirements of the inspection codes. Ultrasonic sensors were verified for the use in the RPV inspection. (autho0008.

KENO-V code

International Nuclear Information System (INIS)

Cramer, S.N.

1984-01-01

The KENO-V code is the current release of the Oak Ridge multigroup Monte Carlo criticality code development. The original KENO, with 16 group Hansen-Roach cross sections and P 1 scattering, was one ot the first multigroup Monte Carlo codes and it and its successors have always been a much-used research tool for criticality studies. KENO-V is able to accept large neutron cross section libraries (a 218 group set is distributed with the code) and has a general P/sub N/ scattering capability. A supergroup feature allows execution of large problems on small computers, but at the expense of increased calculation time and system input/output operations. This supergroup feature is activated automatically by the code in a manner which utilizes as much computer memory as is available. The primary purpose of KENO-V is to calculate the system k/sub eff/, from small bare critical assemblies to large reflected arrays of differing fissile and moderator elements. In this respect KENO-V neither has nor requires the many options and sophisticated biasing techniques of general Monte Carlo codes

A code for obtaining temperature distribution by finite element method

International Nuclear Information System (INIS)

Bloch, M.

1984-01-01

The ELEFIB Fortran language computer code using finite element method for calculating temperature distribution of linear and two dimensional problems, in permanent region or in the transient phase of heat transfer, is presented. The formulation of equations uses the Galerkin method. Some examples are shown and the results are compared with other papers. The comparative evaluation shows that the elaborated code gives good values. (M.C.K.) [pt

Towards Automatic Learning of Heuristics for Mechanical Transformations of Procedural Code

Directory of Open Access Journals (Sweden)

Guillermo Vigueras

2017-01-01

Full Text Available The current trends in next-generation exascale systems go towards integrating a wide range of specialized (co-processors into traditional supercomputers. Due to the efficiency of heterogeneous systems in terms of Watts and FLOPS per surface unit, opening the access of heterogeneous platforms to a wider range of users is an important problem to be tackled. However, heterogeneous platforms limit the portability of the applications and increase development complexity due to the programming skills required. Program transformation can help make programming heterogeneous systems easier by defining a step-wise transformation process that translates a given initial code into a semantically equivalent final code, but adapted to a specific platform. Program transformation systems require the definition of efficient transformation strategies to tackle the combinatorial problem that emerges due to the large set of transformations applicable at each step of the process. In this paper we propose a machine learning-based approach to learn heuristics to define program transformation strategies. Our approach proposes a novel combination of reinforcement learning and classification methods to efficiently tackle the problems inherent to this type of systems. Preliminary results demonstrate the suitability of this approach.

Coupling methods for parallel running RELAPSim codes in nuclear power plant simulation

Energy Technology Data Exchange (ETDEWEB)

Li, Yankai; Lin, Meng, E-mail: linmeng@sjtu.edu.cn; Yang, Yanhua

2016-02-15

When the plant is modeled detailedly for high precision, it is hard to achieve real-time calculation for one single RELAP5 in a large-scale simulation. To improve the speed and ensure the precision of simulation at the same time, coupling methods for parallel running RELAPSim codes were proposed in this study. Explicit coupling method via coupling boundaries was realized based on a data-exchange and procedure-control environment. Compromise of synchronization frequency was well considered to improve the precision of simulation and guarantee the real-time simulation at the same time. The coupling methods were assessed using both single-phase flow models and two-phase flow models and good agreements were obtained between the splitting–coupling models and the integrated model. The mitigation of SGTR was performed as an integral application of the coupling models. A large-scope NPP simulator was developed adopting six splitting–coupling models of RELAPSim and other simulation codes. The coupling models could improve the speed of simulation significantly and make it possible for real-time calculation. In this paper, the coupling of the models in the engineering simulator is taken as an example to expound the coupling methods, i.e., coupling between parallel running RELAPSim codes, and coupling between RELAPSim code and other types of simulation codes. However, the coupling methods are also referable in other simulator, for example, a simulator employing ATHLETE instead of RELAP5, other logic code instead of SIMULINK. It is believed the coupling method is commonly used for NPP simulator regardless of the specific codes chosen in this paper.

FitSKIRT: genetic algorithms to automatically fit dusty galaxies with a Monte Carlo radiative transfer code

Science.gov (United States)

De Geyter, G.; Baes, M.; Fritz, J.; Camps, P.

2013-02-01

We present FitSKIRT, a method to efficiently fit radiative transfer models to UV/optical images of dusty galaxies. These images have the advantage that they have better spatial resolution compared to FIR/submm data. FitSKIRT uses the GAlib genetic algorithm library to optimize the output of the SKIRT Monte Carlo radiative transfer code. Genetic algorithms prove to be a valuable tool in handling the multi- dimensional search space as well as the noise induced by the random nature of the Monte Carlo radiative transfer code. FitSKIRT is tested on artificial images of a simulated edge-on spiral galaxy, where we gradually increase the number of fitted parameters. We find that we can recover all model parameters, even if all 11 model parameters are left unconstrained. Finally, we apply the FitSKIRT code to a V-band image of the edge-on spiral galaxy NGC 4013. This galaxy has been modeled previously by other authors using different combinations of radiative transfer codes and optimization methods. Given the different models and techniques and the complexity and degeneracies in the parameter space, we find reasonable agreement between the different models. We conclude that the FitSKIRT method allows comparison between different models and geometries in a quantitative manner and minimizes the need of human intervention and biasing. The high level of automation makes it an ideal tool to use on larger sets of observed data.

Automatic commissioning of a GPU-based Monte Carlo radiation dose calculation code for photon radiotherapy

International Nuclear Information System (INIS)

Tian, Zhen; Jia, Xun; Jiang, Steve B; Graves, Yan Jiang

2014-01-01

Monte Carlo (MC) simulation is commonly considered as the most accurate method for radiation dose calculations. Commissioning of a beam model in the MC code against a clinical linear accelerator beam is of crucial importance for its clinical implementation. In this paper, we propose an automatic commissioning method for our GPU-based MC dose engine, gDPM. gDPM utilizes a beam model based on a concept of phase-space-let (PSL). A PSL contains a group of particles that are of the same type and close in space and energy. A set of generic PSLs was generated by splitting a reference phase-space file. Each PSL was associated with a weighting factor, and in dose calculations the particle carried a weight corresponding to the PSL where it was from. Dose for each PSL in water was pre-computed, and hence the dose in water for a whole beam under a given set of PSL weighting factors was the weighted sum of the PSL doses. At the commissioning stage, an optimization problem was solved to adjust the PSL weights in order to minimize the difference between the calculated dose and measured one. Symmetry and smoothness regularizations were utilized to uniquely determine the solution. An augmented Lagrangian method was employed to solve the optimization problem. To validate our method, a phase-space file of a Varian TrueBeam 6 MV beam was used to generate the PSLs for 6 MV beams. In a simulation study, we commissioned a Siemens 6 MV beam on which a set of field-dependent phase-space files was available. The dose data of this desired beam for different open fields and a small off-axis open field were obtained by calculating doses using these phase-space files. The 3D γ-index test passing rate within the regions with dose above 10% of d max dose for those open fields tested was improved averagely from 70.56 to 99.36% for 2%/2 mm criteria and from 32.22 to 89.65% for 1%/1 mm criteria. We also tested our commissioning method on a six-field head-and-neck cancer IMRT plan. The

JEMs and incompatible occupational coding systems: Effect of manual and automatic recoding of job codes on exposure assignment

NARCIS (Netherlands)

Koeman, T.; Offermans, N.S.M.; Christopher-De Vries, Y.; Slottje, P.; Brandt, P.A. van den; Goldbohm, R.A.; Kromhout, H.; Vermeulen, R.

2013-01-01

Background: In epidemiological studies, occupational exposure estimates are often assigned through linkage of job histories to job-exposure matrices (JEMs). However, available JEMs may have a coding system incompatible with the coding system used to code the job histories, necessitating a

Automated approach to quantitative error analysis. [BEAPAC-1T and -3T, for testing reliability of computer codes, in FORTRAN for IBM 370/195 and CDC 6400

Energy Technology Data Exchange (ETDEWEB)

Bareiss, E.H.

1977-04-01

A method is described how a quantitative measure for the robustness of a given neutron transport theory code for coarse network calculations can be obtained. A code that performs this task automatically and at only nominal cost is described. This code also generates user-oriented benchmark problems which exhibit the analytic behavior at interfaces. 5 figures, 1 table.

An Efficient Integer Coding and Computing Method for Multiscale Time Segment

Directory of Open Access Journals (Sweden)

TONG Xiaochong

2016-12-01

Full Text Available This article focus on the exist problem and status of current time segment coding, proposed a new set of approach about time segment coding: multi-scale time segment integer coding (MTSIC. This approach utilized the tree structure and the sort by size formed among integer, it reflected the relationship among the multi-scale time segments: order, include/contained, intersection, etc., and finally achieved an unity integer coding processing for multi-scale time. On this foundation, this research also studied the computing method for calculating the time relationships of MTSIC, to support an efficient calculation and query based on the time segment, and preliminary discussed the application method and prospect of MTSIC. The test indicated that, the implement of MTSIC is convenient and reliable, and the transformation between it and the traditional method is convenient, it has the very high efficiency in query and calculating.

Method and apparatus for mounting or dismounting a semi-automatic twist-lock

NARCIS (Netherlands)

Klein Breteler, A.J.; Tekeli, G.

2001-01-01

The invention relates to a method for mounting or dismounting a semi-automatic twistlock at a corner of a deck container, wherein the twistlock is mounted or dismounted on a quayside where a ship may be docked for loading or unloading, in a loading or unloading terminal installed on the quayside,

Research of x-ray automatic image mosaic method

Science.gov (United States)

Liu, Bin; Chen, Shunan; Guo, Lianpeng; Xu, Wanpeng

2013-10-01

Image mosaic has widely applications value in the fields of medical image analysis, and it is a technology that carries on the spatial matching to a series of image which are overlapped with each other, and finally builds a seamless and high quality image which has high resolution and big eyeshot. In this paper, the method of grayscale cutting pseudo-color enhancement was firstly used to complete the mapping transformation from gray to the pseudo-color, and to extract SIFT features from the images. And then by making use of a similar measure of NCC (normalized cross correlation - Normalized cross-correlation), the method of RANSAC (Random Sample Consensus) was used to exclude the pseudofeature points right in order to complete the exact match of feature points. Finally, seamless mosaic and color fusion were completed by using wavelet multi-decomposition. The experiment shows that the method we used can effectively improve the precision and automation of the medical image mosaic, and provide an effective technical approach for automatic medical image mosaic.

Feature extraction and descriptor calculation methods for automatic georeferencing of Philippines' first microsatellite imagery

Science.gov (United States)

Tupas, M. E. A.; Dasallas, J. A.; Jiao, B. J. D.; Magallon, B. J. P.; Sempio, J. N. H.; Ramos, M. K. F.; Aranas, R. K. D.; Tamondong, A. M.

2017-10-01

The FAST-SIFT corner detector and descriptor extractor combination was used to automatically georeference DIWATA-1 Spaceborne Multispectral Imager images. Features from the Fast Accelerated Segment Test (FAST) algorithm detects corners or keypoints in an image, and these robustly detected keypoints have well-defined positions. Descriptors were computed using Scale-Invariant Feature Transform (SIFT) extractor. FAST-SIFT method effectively SMI same-subscene images detected by the NIR sensor. The method was also tested in stitching NIR images with varying subscene swept by the camera. The slave images were matched to the master image. The keypoints served as the ground control points. Random sample consensus was used to eliminate fall-out matches and ensure accuracy of the feature points from which the transformation parameters were derived. Keypoints are matched based on their descriptor vector. Nearest-neighbor matching is employed based on a metric distance between the descriptors. The metrics include Euclidean and city block, among others. Rough matching outputs not only the correct matches but also the faulty matches. A previous work in automatic georeferencing incorporates a geometric restriction. In this work, we applied a simplified version of the learning method. RANSAC was used to eliminate fall-out matches and ensure accuracy of the feature points. This method identifies if a point fits the transformation function and returns inlier matches. The transformation matrix was solved by Affine, Projective, and Polynomial models. The accuracy of the automatic georeferencing method were determined by calculating the RMSE of interest points, selected randomly, between the master image and transformed slave image.

Bidirectional automatic release of reserve for low voltage network made with low capacity PLCs

Science.gov (United States)

Popa, I.; Popa, G. N.; Diniş, C. M.; Deaconu, S. I.

2018-01-01

The article presents the design of a bidirectional automatic release of reserve made on two types low capacity programmable logic controllers: PS-3 from Klöckner-Moeller and Zelio from Schneider. It analyses the electronic timing circuits that can be used for making the bidirectional automatic release of reserve: time-on delay circuit and time-off delay circuit (two types). In the paper are present the sequences code for timing performed on the PS-3 PLC, the logical functions for the bidirectional automatic release of reserve, the classical control electrical diagram (with contacts, relays, and time relays), the electronic control diagram (with logical gates and timing circuits), the code (in IL language) made for the PS-3 PLC, and the code (in FBD language) made for Zelio PLC. A comparative analysis will be carried out on the use of the two types of PLC and will be present the advantages of using PLCs.

MIAQuant, a novel system for automatic segmentation, measurement, and localization comparison of different biomarkers from serialized histological slices.

Science.gov (United States)

Casiraghi, Elena; Cossa, Mara; Huber, Veronica; Rivoltini, Licia; Tozzi, Matteo; Villa, Antonello; Vergani, Barbara

2017-11-02

In the clinical practice, automatic image analysis methods quickly quantizing histological results by objective and replicable methods are getting more and more necessary and widespread. Despite several commercial software products are available for this task, they are very little flexible, and provided as black boxes without modifiable source code. To overcome the aforementioned problems, we employed the commonly used MATLAB platform to develop an automatic method, MIAQuant, for the analysis of histochemical and immunohistochemical images, stained with various methods and acquired by different tools. It automatically extracts and quantifies markers characterized by various colors and shapes; furthermore, it aligns contiguous tissue slices stained by different markers and overlaps them with differing colors for visual comparison of their localization. Application of MIAQuant for clinical research fields, such as oncology and cardiovascular disease studies, has proven its efficacy, robustness and flexibility with respect to various problems; we highlight that, the flexibility of MIAQuant makes it an important tool to be exploited for basic researches where needs are constantly changing. MIAQuant software and its user manual are freely available for clinical studies, pathological research, and diagnosis.

Repairing business process models as retrieved from source code

NARCIS (Netherlands)

Fernández-Ropero, M.; Reijers, H.A.; Pérez-Castillo, R.; Piattini, M.; Nurcan, S.; Proper, H.A.; Soffer, P.; Krogstie, J.; Schmidt, R.; Halpin, T.; Bider, I.

2013-01-01

The static analysis of source code has become a feasible solution to obtain underlying business process models from existing information systems. Due to the fact that not all information can be automatically derived from source code (e.g., consider manual activities), such business process models

MadEvent: automatic event generation with MadGraph

International Nuclear Information System (INIS)

Maltoni, Fabio; Stelzer, Tim

2003-01-01

We present a new multi-channel integration method and its implementation in the multi-purpose event generator MadEvent, which is based on MadGraph. Given a process, MadGraph automatically identifies all the relevant subprocesses, generates both the amplitudes and the mappings needed for an efficient integration over the phase space, and passes them to MadEvent. As a result, a process-specific, stand-alone code is produced that allows the user to calculate cross sections and produce unweighted events in a standard output format. Several examples are given for processes that are relevant for physics studies at present and forthcoming colliders. (author)

Automatic Extraction of Urban Built-Up Area Based on Object-Oriented Method and Remote Sensing Data

Science.gov (United States)

Li, L.; Zhou, H.; Wen, Q.; Chen, T.; Guan, F.; Ren, B.; Yu, H.; Wang, Z.

2018-04-01

Built-up area marks the use of city construction land in the different periods of the development, the accurate extraction is the key to the studies of the changes of urban expansion. This paper studies the technology of automatic extraction of urban built-up area based on object-oriented method and remote sensing data, and realizes the automatic extraction of the main built-up area of the city, which saves the manpower cost greatly. First, the extraction of construction land based on object-oriented method, the main technical steps include: (1) Multi-resolution segmentation; (2) Feature Construction and Selection; (3) Information Extraction of Construction Land Based on Rule Set, The characteristic parameters used in the rule set mainly include the mean of the red band (Mean R), Normalized Difference Vegetation Index (NDVI), Ratio of residential index (RRI), Blue band mean (Mean B), Through the combination of the above characteristic parameters, the construction site information can be extracted. Based on the degree of adaptability, distance and area of the object domain, the urban built-up area can be quickly and accurately defined from the construction land information without depending on other data and expert knowledge to achieve the automatic extraction of the urban built-up area. In this paper, Beijing city as an experimental area for the technical methods of the experiment, the results show that: the city built-up area to achieve automatic extraction, boundary accuracy of 2359.65 m to meet the requirements. The automatic extraction of urban built-up area has strong practicality and can be applied to the monitoring of the change of the main built-up area of city.

Towards a Framework for Generating Tests to Satisfy Complex Code Coverage in Java Pathfinder

Science.gov (United States)

Staats, Matt

2009-01-01

We present work on a prototype tool based on the JavaPathfinder (JPF) model checker for automatically generating tests satisfying the MC/DC code coverage criterion. Using the Eclipse IDE, developers and testers can quickly instrument Java source code with JPF annotations covering all MC/DC coverage obligations, and JPF can then be used to automatically generate tests that satisfy these obligations. The prototype extension to JPF enables various tasks useful in automatic test generation to be performed, such as test suite reduction and execution of generated tests.

A device for automatically recording information on the reasons for idling of stopes

Energy Technology Data Exchange (ETDEWEB)

Dergachev, L G; Kuzoyatov, G I; Tereshchenko, V N

1979-01-01

One substantial reserve for raising production efficiency in the coal industry is reduction of nonproductive time costs. The state of the art of stoping work and design features of stoping equipment and devices for obtaining information do not presently enable complete automation of the process of obtaining data on the reasons for down times. Therefore, together with automatic data formation manual recording of information is required through remote control equipment to the controlling computer directly from the work place. The Donetsk department of the Giprougleavtomatizatsiy institute has developed the UKIP-1 device for automatic recording of information on the reasons for stope down times. The device is designed for use in an automatic process control system of coal mines. It provides coding of information and its conversion to a form suitable for transmission through remote control channels, further processing, and recording. The device enables recording of information on down times of eight objects of the stope. Up to eight down time reasons can be recorded for each object. The device has 2 contact outputs, on one of which is formed an informational sequential eight-bit code; on the other, 8 clock pulses. The device's code is generated automatically, after it is activated by a switch. The length of the code packet results from the maximum possible information transmission rate of the existing mine remote control systems, and equals 12+2 sec. The clock pulse length equals half the length of the information pulse. The device has been tested at coal mines, and recommended for industrial production. UKIP-1 devices are being used in a pilot model of an automatic production control system of the Sotsialisticheskiy Donbass Newspaper mine of the Donetskugol' production association.

Adaptive Space–Time Coding Using ARQ

KAUST Repository

Makki, Behrooz; Svensson, Tommy; Eriksson, Thomas; Alouini, Mohamed-Slim

2015-01-01

We study the energy-limited outage probability of the block space-time coding (STC)-based systems utilizing automatic repeat request (ARQ) feedback and adaptive power allocation. Taking the ARQ feedback costs into account, we derive closed

AutoWIG: automatic generation of python bindings for C++ libraries

Directory of Open Access Journals (Sweden)

Pierre Fernique

2018-04-01

Full Text Available Most of Python and R scientific packages incorporate compiled scientific libraries to speed up the code and reuse legacy libraries. While several semi-automatic solutions exist to wrap these compiled libraries, the process of wrapping a large library is cumbersome and time consuming. In this paper, we introduce AutoWIG, a Python package that wraps automatically compiled libraries into high-level languages using LLVM/Clang technologies and the Mako templating engine. Our approach is automatic, extensible, and applies to complex C++ libraries, composed of thousands of classes or incorporating modern meta-programming constructs.

A New Automatic Method of Urban Areas Mapping in East Asia from LANDSAT Data

Science.gov (United States)

XU, R.; Jia, G.

2012-12-01

Cities, as places where human activities are concentrated, account for a small percent of global land cover but are frequently cited as the chief causes of, and solutions to, climate, biogeochemistry, and hydrology processes at local, regional, and global scales. Accompanying with uncontrolled economic growth, urban sprawl has been attributed to the accelerating integration of East Asia into the world economy and involved dramatic changes in its urban form and land use. To understand the impact of urban extent on biogeophysical processes, reliable mapping of built-up areas is particularly essential in eastern cities as a result of their characteristics of smaller patches, more fragile, and a lower fraction of the urban landscape which does not have natural than in the West. Segmentation of urban land from other land-cover types using remote sensing imagery can be done by standard classification processes as well as a logic rule calculation based on spectral indices and their derivations. Efforts to establish such a logic rule with no threshold for automatically mapping are highly worthwhile. Existing automatic methods are reviewed, and then a proposed approach is introduced including the calculation of the new index and the improved logic rule. Following this, existing automatic methods as well as the proposed approach are compared in a common context. Afterwards, the proposed approach is tested separately in cities of large, medium, and small scale in East Asia selected from different LANDSAT images. The results are promising as the approach can efficiently segment urban areas, even in the presence of more complex eastern cities. Key words: Urban extraction; Automatic Method; Logic Rule; LANDSAT images; East AisaThe Proposed Approach of Extraction of Urban Built-up Areas in Guangzhou, China

A METHOD OF AUTOMATIC DETERMINATION OF THE NUMBER OF THE ELECTRICAL MOTORS SIMULTANEOUSLY WORKING IN GROUP

Directory of Open Access Journals (Sweden)

A. V. Voloshko

2016-11-01

Full Text Available Purpose. Propose a method of automatic determination of the number of operating high voltage electric motors in the group of the same type based on the determination and analysis of the account data of power consumption, obtained from of electric power meters installed at the connection of motors. Results. The algorithm of the automatic determination program for the number of working in the same group of electric motors, which is based on the determination of the motor power minimum value at which it is considered on, was developed. Originality. For the first time a method of automatic determination of the number of working of the same type high-voltage motors group was proposed. Practical value. Obtained results may be used for the introduction of an automated accounting run of each motor, calculating the parameters of the equivalent induction motor or a synchronous motor.

Control rod computer code IAMCOS: general theory and numerical methods

International Nuclear Information System (INIS)

West, G.

1982-11-01

IAMCOS is a computer code for the description of mechanical and thermal behavior of cylindrical control rods for fast breeders. This code version was applied, tested and modified from 1979 to 1981. In this report are described the basic model (02 version), theoretical definitions and computation methods [fr

Sparse encoding of automatic visual association in hippocampal networks

DEFF Research Database (Denmark)

Hulme, Oliver J; Skov, Martin; Chadwick, Martin J

2014-01-01

Intelligent action entails exploiting predictions about associations between elements of ones environment. The hippocampus and mediotemporal cortex are endowed with the network topology, physiology, and neurochemistry to automatically and sparsely code sensori-cognitive associations that can...

Deep Learning Methods for Improved Decoding of Linear Codes

Science.gov (United States)

Nachmani, Eliya; Marciano, Elad; Lugosch, Loren; Gross, Warren J.; Burshtein, David; Be'ery, Yair

2018-02-01

The problem of low complexity, close to optimal, channel decoding of linear codes with short to moderate block length is considered. It is shown that deep learning methods can be used to improve a standard belief propagation decoder, despite the large example space. Similar improvements are obtained for the min-sum algorithm. It is also shown that tying the parameters of the decoders across iterations, so as to form a recurrent neural network architecture, can be implemented with comparable results. The advantage is that significantly less parameters are required. We also introduce a recurrent neural decoder architecture based on the method of successive relaxation. Improvements over standard belief propagation are also observed on sparser Tanner graph representations of the codes. Furthermore, we demonstrate that the neural belief propagation decoder can be used to improve the performance, or alternatively reduce the computational complexity, of a close to optimal decoder of short BCH codes.

Vectorization, parallelization and porting of nuclear codes (porting). Progress report fiscal 1999

Energy Technology Data Exchange (ETDEWEB)

Kawasaki, Nobuo; Nemoto, Toshiyuki; Kawai, Wataru; Ishizuki, Shigeru [Fujitsu Ltd., Tokyo (Japan); Ogasawara, Shinobu; Kume, Etsuo; Adachi, Masaaki [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment; Yatake, Yo-ichi [Hitachi Ltd., Tokyo (Japan)

2001-01-01

Several computer codes in the nuclear field have been vectorized, parallelized and transported on the FUJITSU VPP500 system, the AP3000 system, the SX-4 system and the Paragon system at Center for Promotion of Computational Science and Engineering in Japan Atomic Energy Research Institute. We dealt with 18 codes in fiscal 1999. These results are reported in 3 parts, i.e., the vectorization and the parallelization part on vector processors, the parallelization port on scalar processors and the porting part. In this report, we describe the porting. In this porting part, the porting of Assisted Model Building with Energy Refinement code version 5 (AMBER5), general purpose Monte Carlo codes far neutron and photon transport calculations based on continuous energy and multigroup methods (MVP/GMVP), automatic editing system for MCNP library code (autonj), neutron damage calculations for materials irradiations and neutron damage calculations for compounds code (SPECTER/SPECOMP), severe accident analysis code (MELCOR) and COolant Boiling in Rod Arrays, Two-Fluid code (COBRA-TF) on the VPP500 system and/or the AP3000 system are described. (author)

The development of underwater remote cutting method for the disassembling of rotary specimen rack KRR-1 and 2

Energy Technology Data Exchange (ETDEWEB)

Lee, D. K.; Jung, K. H.; Lee, K. W.; Oh, W. J. [KAERI, Taejon (Korea, Republic of); Lee, K. Y. [Korea Institute of Industrial Technology, Kwangju (Korea, Republic of)

2004-07-01

The Rotary Specimen Racks (RSRs) were highly activated and then classified intermediate level radioactive waste for the decommissioning of KRR-1anel2. The RSR can be treated as low level radioactive waste after removing stainless steel parts. To reduce the volume of intermediate level radioactive waste, underwater cutting is required to separate stainless steel parts from RSR because of high radioactivity. In this study, the automatic remote cutting method was developed to disassemble RSR under water. For automatic remote cutting processes, a CAM (Computer Aided Manufacturing) system is employed. A computer inputs NC (Numerical Control) codes to the controller, which are based on CAM model, and the controller instructs the equipment to process according to NC codes automatically. And the cutting force model was improved to cut RSR stably. The automatic cutting was conducted using imitation of RSR and then it was resulted that the developed automatic cutting method can be safely disassemble stainless steel parts of RSR under water.

Automatic variable selection method and a comparison for quantitative analysis in laser-induced breakdown spectroscopy

Science.gov (United States)

Duan, Fajie; Fu, Xiao; Jiang, Jiajia; Huang, Tingting; Ma, Ling; Zhang, Cong

2018-05-01

In this work, an automatic variable selection method for quantitative analysis of soil samples using laser-induced breakdown spectroscopy (LIBS) is proposed, which is based on full spectrum correction (FSC) and modified iterative predictor weighting-partial least squares (mIPW-PLS). The method features automatic selection without artificial processes. To illustrate the feasibility and effectiveness of the method, a comparison with genetic algorithm (GA) and successive projections algorithm (SPA) for different elements (copper, barium and chromium) detection in soil was implemented. The experimental results showed that all the three methods could accomplish variable selection effectively, among which FSC-mIPW-PLS required significantly shorter computation time (12 s approximately for 40,000 initial variables) than the others. Moreover, improved quantification models were got with variable selection approaches. The root mean square errors of prediction (RMSEP) of models utilizing the new method were 27.47 (copper), 37.15 (barium) and 39.70 (chromium) mg/kg, which showed comparable prediction effect with GA and SPA.

Predictability of monthly temperature and precipitation using automatic time series forecasting methods

Science.gov (United States)

Papacharalampous, Georgia; Tyralis, Hristos; Koutsoyiannis, Demetris

2018-02-01

We investigate the predictability of monthly temperature and precipitation by applying automatic univariate time series forecasting methods to a sample of 985 40-year-long monthly temperature and 1552 40-year-long monthly precipitation time series. The methods include a naïve one based on the monthly values of the last year, as well as the random walk (with drift), AutoRegressive Fractionally Integrated Moving Average (ARFIMA), exponential smoothing state-space model with Box-Cox transformation, ARMA errors, Trend and Seasonal components (BATS), simple exponential smoothing, Theta and Prophet methods. Prophet is a recently introduced model inspired by the nature of time series forecasted at Facebook and has not been applied to hydrometeorological time series before, while the use of random walk, BATS, simple exponential smoothing and Theta is rare in hydrology. The methods are tested in performing multi-step ahead forecasts for the last 48 months of the data. We further investigate how different choices of handling the seasonality and non-normality affect the performance of the models. The results indicate that: (a) all the examined methods apart from the naïve and random walk ones are accurate enough to be used in long-term applications; (b) monthly temperature and precipitation can be forecasted to a level of accuracy which can barely be improved using other methods; (c) the externally applied classical seasonal decomposition results mostly in better forecasts compared to the automatic seasonal decomposition used by the BATS and Prophet methods; and (d) Prophet is competitive, especially when it is combined with externally applied classical seasonal decomposition.

MAX: an expert system for running the modular transport code APOLLO II

International Nuclear Information System (INIS)

Loussouarn, O.; Ferraris, C.; Boivineau, A.

1990-01-01

MAX is an expert system built to help users of the APOLLO II code to prepare the input data deck to run a job. APOLLO II is a modular transport-theory code for calculating the neutron flux in various geometries. The associated GIBIANE command language allows the user to specify the physical structure and the computational method to be used in the calculation. The purpose of MAX is to bring into play expertise in both neutronic and computing aspects of the code, as well as various computational schemes, in order to generate automatically a batch data set corresponding to the APOLLO II calculation desired by the user. MAX is implemented on the SUN 3/60 workstation with the S1 tool and graphic interface external functions

Analysis of facial expressions in parkinson's disease through video-based automatic methods.

Science.gov (United States)

Bandini, Andrea; Orlandi, Silvia; Escalante, Hugo Jair; Giovannelli, Fabio; Cincotta, Massimo; Reyes-Garcia, Carlos A; Vanni, Paola; Zaccara, Gaetano; Manfredi, Claudia

2017-04-01

The automatic analysis of facial expressions is an evolving field that finds several clinical applications. One of these applications is the study of facial bradykinesia in Parkinson's disease (PD), which is a major motor sign of this neurodegenerative illness. Facial bradykinesia consists in the reduction/loss of facial movements and emotional facial expressions called hypomimia. In this work we propose an automatic method for studying facial expressions in PD patients relying on video-based METHODS: 17 Parkinsonian patients and 17 healthy control subjects were asked to show basic facial expressions, upon request of the clinician and after the imitation of a visual cue on a screen. Through an existing face tracker, the Euclidean distance of the facial model from a neutral baseline was computed in order to quantify the changes in facial expressivity during the tasks. Moreover, an automatic facial expressions recognition algorithm was trained in order to study how PD expressions differed from the standard expressions. Results show that control subjects reported on average higher distances than PD patients along the tasks. This confirms that control subjects show larger movements during both posed and imitated facial expressions. Moreover, our results demonstrate that anger and disgust are the two most impaired expressions in PD patients. Contactless video-based systems can be important techniques for analyzing facial expressions also in rehabilitation, in particular speech therapy, where patients could get a definite advantage from a real-time feedback about the proper facial expressions/movements to perform. Copyright © 2017 Elsevier B.V. All rights reserved.

Constrained Convolutional Sparse Coding for Parametric Based Reconstruction of Line Drawings

KAUST Repository

Shaheen, Sara

2017-12-25

Convolutional sparse coding (CSC) plays an essential role in many computer vision applications ranging from image compression to deep learning. In this work, we spot the light on a new application where CSC can effectively serve, namely line drawing analysis. The process of drawing a line drawing can be approximated as the sparse spatial localization of a number of typical basic strokes, which in turn can be cast as a non-standard CSC model that considers the line drawing formation process from parametric curves. These curves are learned to optimize the fit between the model and a specific set of line drawings. Parametric representation of sketches is vital in enabling automatic sketch analysis, synthesis and manipulation. A couple of sketch manipulation examples are demonstrated in this work. Consequently, our novel method is expected to provide a reliable and automatic method for parametric sketch description. Through experiments, we empirically validate the convergence of our method to a feasible solution.

Design and construction of an automatic texture goniometer

International Nuclear Information System (INIS)

Lima, N.B. de; Pontes, E.W.; Monteiro, P.R.B.; Imakuma, K.

1984-01-01

The project and construction of a two-axis automatic goniometer, operated by step motors, adaptable to the scanning goniometer SG-7 or SG-8 fabricated by Rigaku-Deuki. To allow the operation of this texture goniometer, computer codes has been developed. (E.G.) [pt

Adaptive and automatic red blood cell counting method based on microscopic hyperspectral imaging technology

Science.gov (United States)

Liu, Xi; Zhou, Mei; Qiu, Song; Sun, Li; Liu, Hongying; Li, Qingli; Wang, Yiting

2017-12-01

Red blood cell counting, as a routine examination, plays an important role in medical diagnoses. Although automated hematology analyzers are widely used, manual microscopic examination by a hematologist or pathologist is still unavoidable, which is time-consuming and error-prone. This paper proposes a full-automatic red blood cell counting method which is based on microscopic hyperspectral imaging of blood smears and combines spatial and spectral information to achieve high precision. The acquired hyperspectral image data of the blood smear in the visible and near-infrared spectral range are firstly preprocessed, and then a quadratic blind linear unmixing algorithm is used to get endmember abundance images. Based on mathematical morphological operation and an adaptive Otsu’s method, a binaryzation process is performed on the abundance images. Finally, the connected component labeling algorithm with magnification-based parameter setting is applied to automatically select the binary images of red blood cell cytoplasm. Experimental results show that the proposed method can perform well and has potential for clinical applications.

Development of three-dimensional transport code by the double finite element method

International Nuclear Information System (INIS)

Fujimura, Toichiro

1985-01-01

Development of a three-dimensional neutron transport code by the double finite element method is described. Both of the Galerkin and variational methods are adopted to solve the problem, and then the characteristics of them are compared. Computational results of the collocation method, developed as a technique for the vaviational one, are illustrated in comparison with those of an Ssub(n) code. (author)

Iterative optimization of performance libraries by hierarchical division of codes

International Nuclear Information System (INIS)

Donadio, S.

2007-09-01

The increasing complexity of hardware features incorporated in modern processors makes high performance code generation very challenging. Library generators such as ATLAS, FFTW and SPIRAL overcome this issue by empirically searching in the space of possible program versions for the one that performs the best. This thesis explores fully automatic solution to adapt a compute-intensive application to the target architecture. By mimicking complex sequences of transformations useful to optimize real codes, we show that generative programming is a practical tool to implement a new hierarchical compilation approach for the generation of high performance code relying on the use of state-of-the-art compilers. As opposed to ATLAS, this approach is not application-dependant but can be applied to fairly generic loop structures. Our approach relies on the decomposition of the original loop nest into simpler kernels. These kernels are much simpler to optimize and furthermore, using such codes makes the performance trade off problem much simpler to express and to solve. Finally, we propose a new approach for the generation of performance libraries based on this decomposition method. We show that our method generates high-performance libraries, in particular for BLAS. (author)

Directed Hidden-Code Extractor for Environment-Sensitive Malwares

Science.gov (United States)

Jia, Chunfu; Wang, Zhi; Lu, Kai; Liu, Xinhai; Liu, Xin

Malware writers often use packing technique to hide malicious payload. A number of dynamic unpacking tools are.designed in order to identify and extract the hidden code in the packed malware. However, such unpacking methods.are all based on a highly controlled environment that is vulnerable to various anti-unpacking techniques. If execution.environment is suspicious, malwares may stay inactive for a long time or stop execution immediately to evade.detection. In this paper, we proposed a novel approach that automatically reasons about the environment requirements.imposed by malware, then directs a unpacking tool to change the controlled environment to extract the hide code at.the new environment. The experimental results show that our approach significantly increases the resilience of the.traditional unpacking tools to environment-sensitive malware.

Advancing methods for reliably assessing motivational interviewing fidelity using the motivational interviewing skills code.

Science.gov (United States)

Lord, Sarah Peregrine; Can, Doğan; Yi, Michael; Marin, Rebeca; Dunn, Christopher W; Imel, Zac E; Georgiou, Panayiotis; Narayanan, Shrikanth; Steyvers, Mark; Atkins, David C

2015-02-01

The current paper presents novel methods for collecting MISC data and accurately assessing reliability of behavior codes at the level of the utterance. The MISC 2.1 was used to rate MI interviews from five randomized trials targeting alcohol and drug use. Sessions were coded at the utterance-level. Utterance-based coding reliability was estimated using three methods and compared to traditional reliability estimates of session tallies. Session-level reliability was generally higher compared to reliability using utterance-based codes, suggesting that typical methods for MISC reliability may be biased. These novel methods in MI fidelity data collection and reliability assessment provided rich data for therapist feedback and further analyses. Beyond implications for fidelity coding, utterance-level coding schemes may elucidate important elements in the counselor-client interaction that could inform theories of change and the practice of MI. Copyright © 2015 Elsevier Inc. All rights reserved.

Methods for Coding Tobacco-Related Twitter Data: A Systematic Review.

Science.gov (United States)

Lienemann, Brianna A; Unger, Jennifer B; Cruz, Tess Boley; Chu, Kar-Hai

2017-03-31

As Twitter has grown in popularity to 313 million monthly active users, researchers have increasingly been using it as a data source for tobacco-related research. The objective of this systematic review was to assess the methodological approaches of categorically coded tobacco Twitter data and make recommendations for future studies. Data sources included PsycINFO, Web of Science, PubMed, ABI/INFORM, Communication Source, and Tobacco Regulatory Science. Searches were limited to peer-reviewed journals and conference proceedings in English from January 2006 to July 2016. The initial search identified 274 articles using a Twitter keyword and a tobacco keyword. One coder reviewed all abstracts and identified 27 articles that met the following inclusion criteria: (1) original research, (2) focused on tobacco or a tobacco product, (3) analyzed Twitter data, and (4) coded Twitter data categorically. One coder extracted data collection and coding methods. E-cigarettes were the most common type of Twitter data analyzed, followed by specific tobacco campaigns. The most prevalent data sources were Gnip and Twitter's Streaming application programming interface (API). The primary methods of coding were hand-coding and machine learning. The studies predominantly coded for relevance, sentiment, theme, user or account, and location of user. Standards for data collection and coding should be developed to be able to more easily compare and replicate tobacco-related Twitter results. Additional recommendations include the following: sample Twitter's databases multiple times, make a distinction between message attitude and emotional tone for sentiment, code images and URLs, and analyze user profiles. Being relatively novel and widely used among adolescents and black and Hispanic individuals, Twitter could provide a rich source of tobacco surveillance data among vulnerable populations. ©Brianna A Lienemann, Jennifer B Unger, Tess Boley Cruz, Kar-Hai Chu. Originally published in the

Experience with the Incomplete Cholesky Conjugate Gradient method in a diffusion code

International Nuclear Information System (INIS)

Hoebel, W.

1985-01-01

For the numerical solution of sparse systems of linear equations arising from finite difference approximation of the multidimensional neutron diffusion equation fast methods are needed. Effective algorithms for scalar computers may not be likewise suitable on vector computers. In the improved version DIXY2 of the Karlsruhe two-dimensional neutron diffusion code for rectangular geometries an Incomplete Cholesky Conjugate Gradient (ICCG) algorithm has been combined with the originally implemented Cyclically Reduced 4-Lines SOR (CR4LSOR) inner iteration method. The combined procedure is automatically activated for slowly converging applications, thus leading to a drastic reduction of iterations as well as CPU-times on a scalar computer. In a follow-up benchmark study necessary modifications to ICCG and CR4LSOR for their use on a vector computer were investigated. It was found that a modified preconditioning for the ICCG algorithm restricted to the block diagonal matrix is an effective method both on scalar and vector computers. With a splitting of the 9-band-matrix in two triangular Cholesky matrices necessary inversions are performed on a scalar machine by recursive forward and backward substitutions. On vector computers an additional factorization of the triangular matrices into four bidiagonal matrices enables Buneman reduction and the recursive inversion is restricted to a small system. A similar strategy can be realized with CR4LSOR if the unvectorizable Gauss-Seidel iteration is replaced by Double Jacobi and Buneman technique for a vector computer. Compared to single line blocking over the original mesh the cyclical 4-lines reduction of the DIXY inner iteration scheme reduces numbers of iterations and CPU-times considerably

Experience with the incomplete Cholesky conjugate gradient method in a diffusion code

International Nuclear Information System (INIS)

Hoebel, W.

1986-01-01

For the numerical solution of sparse systems of linear equations arising from the finite difference approximation of the multidimensional neutron diffusion equation, fast methods are needed. Effective algorithms for scalar computers may not be likewise suitable on vector computers. In the improved version (DIXY2) of the Karlsruhe two-dimensional neutron diffusion code for rectangular geometries, an incomplete Cholesky conjugate gradient (ICCG) algorithm has been combined with the originally implemented cyclically reduced four-line successive overrelaxation (CR4LSOR) inner iteration method. The combined procedure is automatically activated for slowly converging applications, thus leading to a drastic reduction of iterations as well as CPU times on a scalar computer. In a follow-up benchmark study, necessary modifications to ICCG and CR4LSOR for use on a vector computer were investigated. It was found that a modified preconditioning for the ICCG algorithm restricted to the block diagonal matrix is an effective method both on scalar and vector computers. With a splitting of the nine-band matrix in two triangular Cholesky matrices, necessary inversions are performed on a scalar machine by recursive forward and backward substitutions. On vector computers an additional factorization of the triangular matrices into four bidiagonal matrices enables Buneman reduction, and the recursive inversion is restricted to a small system. A similar strategy can be realized with CR4LSOR if the unvectorizable Gauss-eidel iteration is replaced by Double Jacobi and Buneman techniques for a vector computer. Compared to single-line blocking over the original mesh, the cyclical four-line reduction of the DIXY inner iteration scheme reduces numbers of iterations and CPU times considerably

Fully automatic adjoints: a robust and efficient mechanism for generating adjoint ocean models

Science.gov (United States)

Ham, D. A.; Farrell, P. E.; Funke, S. W.; Rognes, M. E.

2012-04-01

The problem of generating and maintaining adjoint models is sufficiently difficult that typically only the most advanced and well-resourced community ocean models achieve it. There are two current technologies which each suffer from their own limitations. Algorithmic differentiation, also called automatic differentiation, is employed by models such as the MITGCM [2] and the Alfred Wegener Institute model FESOM [3]. This technique is very difficult to apply to existing code, and requires a major initial investment to prepare the code for automatic adjoint generation. AD tools may also have difficulty with code employing modern software constructs such as derived data types. An alternative is to formulate the adjoint differential equation and to discretise this separately. This approach, known as the continuous adjoint and employed in ROMS [4], has the disadvantage that two different model code bases must be maintained and manually kept synchronised as the model develops. The discretisation of the continuous adjoint is not automatically consistent with that of the forward model, producing an additional source of error. The alternative presented here is to formulate the flow model in the high level language UFL (Unified Form Language) and to automatically generate the model using the software of the FEniCS project. In this approach it is the high level code specification which is differentiated, a task very similar to the formulation of the continuous adjoint [5]. However since the forward and adjoint models are generated automatically, the difficulty of maintaining them vanishes and the software engineering process is therefore robust. The scheduling and execution of the adjoint model, including the application of an appropriate checkpointing strategy is managed by libadjoint [1]. In contrast to the conventional algorithmic differentiation description of a model as a series of primitive mathematical operations, libadjoint employs a new abstraction of the simulation

Monte-Carlo method - codes for the study of criticality problems (on IBM 7094); Methode de Monte- Carlo - codes pour l'etude des problemes de criticite (IBM 7094)

Energy Technology Data Exchange (ETDEWEB)

Moreau, J; Rabot, H; Robin, C [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

1965-07-01

The two codes presented here allow to determine the multiplication constant of media containing fissionable materials under numerous and divided forms; they are based on the Monte-Carlo method. The first code apply to x, y, z, geometries. The volume to be studied ought to be divisible in parallelepipeds, the media within each parallelepiped being limited by non-secant surfaces. The second code is intended for r, 0, z geometries. The results include an analysis of collisions in each medium. Applications and examples with informations on time and accuracy are given. (authors) [French] Les deux codes presentes dans ce rapport permettent la determination des coefficients de multiplication de milieux contenant des matieres fissiles sous des formes tres variees et divisees, ils reposent sur la methode de Monte-Carlo. Le premier code s'applique aux geometries x, y, z, le volume a etudier doit pouvoir etre decompose en parallelepipedes, les milieux a l'interieur de chaque parallelepipede etant limites par des surfaces non secantes. Le deuxieme code s'applique aux geometries r, 0, z. Les resultats comportent une analyse des collisions dans chaque milieu. Des applications et des exemples avec les indications de temps et de precision sont fournis. (auteurs)

A new robust markerless method for automatic image-to-patient registration in image-guided neurosurgery system.

Science.gov (United States)

Liu, Yinlong; Song, Zhijian; Wang, Manning

2017-12-01

Compared with the traditional point-based registration in the image-guided neurosurgery system, surface-based registration is preferable because it does not use fiducial markers before image scanning and does not require image acquisition dedicated for navigation purposes. However, most existing surface-based registration methods must include a manual step for coarse registration, which increases the registration time and elicits some inconvenience and uncertainty. A new automatic surface-based registration method is proposed, which applies 3D surface feature description and matching algorithm to obtain point correspondences for coarse registration and uses the iterative closest point (ICP) algorithm in the last step to obtain an image-to-patient registration. Both phantom and clinical data were used to execute automatic registrations and target registration error (TRE) calculated to verify the practicality and robustness of the proposed method. In phantom experiments, the registration accuracy was stable across different downsampling resolutions (18-26 mm) and different support radii (2-6 mm). In clinical experiments, the mean TREs of two patients by registering full head surfaces were 1.30 mm and 1.85 mm. This study introduced a new robust automatic surface-based registration method based on 3D feature matching. The method achieved sufficient registration accuracy with different real-world surface regions in phantom and clinical experiments.

Optimized iterative decoding method for TPC coded CPM

Science.gov (United States)

Ma, Yanmin; Lai, Penghui; Wang, Shilian; Xie, Shunqin; Zhang, Wei

2018-05-01

Turbo Product Code (TPC) coded Continuous Phase Modulation (CPM) system (TPC-CPM) has been widely used in aeronautical telemetry and satellite communication. This paper mainly investigates the improvement and optimization on the TPC-CPM system. We first add the interleaver and deinterleaver to the TPC-CPM system, and then establish an iterative system to iteratively decode. However, the improved system has a poor convergence ability. To overcome this issue, we use the Extrinsic Information Transfer (EXIT) analysis to find the optimal factors for the system. The experiments show our method is efficient to improve the convergence performance.

Development of automatic control method for cryopump system for JT-60 neutral beam injector

International Nuclear Information System (INIS)

Shibanuma, Kiyoshi; Akino, Noboru; Dairaku, Masayuki; Ohuchi, Yutaka; Shibata, Takemasa

1991-10-01

A cryopump system for JT-60 neutral beam injector (NBI) is composed of 14 cryopumps with the largest total pumping speed of 20000 m 3 /s in the world, which are cooled by liquid helium through a long-distance liquid helium transferline of about 500 m from a helium refrigerator with the largest capacity of 3000 W at 3.6 K in Japan. An automatic control method of the cryopump system has been developed and tested. Features of the automatic control method are as follows. 1) Suppression control of the thermal imbalance in cooling-down of the 14 cryopumps. 2) Stable cooling control of the cryopump due to liquid helium supply to six cryopanels by natural circulation in steady-state mode. 3) Stable liquid helium supply control for the cryopumps from the liquid helium dewar in all operation modes of the cryopumps, considering the helium quantities held in respective components of the closed helium loop. 4) Stable control of the helium refrigerator for the fluctuation in thermal load from the cryopumps and the change of operation mode of the cryopumps. In the automatic operation of the cryopump system by the newly developed control method, the cryopump system including the refrigerator was stably operated for all operation modes of the cryopumps, so that the cool-down of 14 cryopumps was completed in 16 hours from the start of cool-down of the system and the cryopumps was stably cooled by natural circulation cooling in steady-state mode. (author)

The role of social cues in the deployment of spatial attention: Head-body relationships automatically activate directional spatial codes in a Simon task

Directory of Open Access Journals (Sweden)

Iwona ePomianowska

2012-02-01

Full Text Available The role of body orientation in the orienting and allocation of social attention was examined using an adapted Simon paradigm. Participants categorized the facial expression of forward facing, computer-generated human figures by pressing one of two response keys, each located left or right of the observers’ body midline, while the orientation of the stimulus figure’s body (trunk, arms, and legs, which was the task-irrelevant feature of interest, was manipulated (oriented towards the left or right visual hemifield with respect to the spatial location of the required response. We found that when the orientation of the body was compatible with the required response location, responses were slower relative to when body orientation was incompatible with the response location. This reverse compatibility effect suggests that body orientation is automatically processed into a directional spatial code, but that this code is based on an integration of head and body orientation within an allocentric-based frame of reference. Moreover, we argue that this code may be derived from the motion information implied in the image of a figure when head and body orientation are incongruent. Our results have implications for understanding the nature of the information that affects the allocation of attention for social orienting.

Design and realization of an automatic weather station at island

Science.gov (United States)

Chen, Yong-hua; Li, Si-ren

2011-10-01

In this paper, the design and development of an automatic weather station monitoring is described. The proposed system consists of a set of sensors for measuring meteorological parameters (temperature, wind speed & direction, rain fall, visibility, etc.). To increase the reliability of the system, wind speed & direction are measured redundantly with duplicate sensors. The sensor signals are collected by the data logger CR1000 at several analog and digital inputs. The CR1000 and the sensors form a completely autonomous system which works with the other systems installed in the container. Communication with the master PC is accomplished over the method of Code Division Multiple Access (CDMA) with the Compact Caimore6550P CDMA DTU. The data are finally stored in tables on the CPU as well as on the CF-Card. The weather station was built as an efficient autonomous system which operates with the other systems to provide the required data for a fully automatic measurement system.

Automatic Deduction in Dynamic Geometry using Sage

Directory of Open Access Journals (Sweden)

Francisco Botana

2012-02-01

Full Text Available We present a symbolic tool that provides robust algebraic methods to handle automatic deduction tasks for a dynamic geometry construction. The main prototype has been developed as two different worksheets for the open source computer algebra system Sage, corresponding to two different ways of coding a geometric construction. In one worksheet, diagrams constructed with the open source dynamic geometry system GeoGebra are accepted. In this worksheet, Groebner bases are used to either compute the equation of a geometric locus in the case of a locus construction or to determine the truth of a general geometric statement included in the GeoGebra construction as a boolean variable. In the second worksheet, locus constructions coded using the common file format for dynamic geometry developed by the Intergeo project are accepted for computation. The prototype and several examples are provided for testing. Moreover, a third Sage worksheet is presented in which a novel algorithm to eliminate extraneous parts in symbolically computed loci has been implemented. The algorithm, based on a recent work on the Groebner cover of parametric systems, identifies degenerate components and extraneous adherence points in loci, both natural byproducts of general polynomial algebraic methods. Detailed examples are discussed.

Improving the local wavenumber method by automatic DEXP transformation

Science.gov (United States)

Abbas, Mahmoud Ahmed; Fedi, Maurizio; Florio, Giovanni

2014-12-01

In this paper we present a new method for source parameter estimation, based on the local wavenumber function. We make use of the stable properties of the Depth from EXtreme Points (DEXP) method, in which the depth to the source is determined at the extreme points of the field scaled with a power-law of the altitude. Thus the method results particularly suited to deal with local wavenumber of high-order, as it is able to overcome its known instability caused by the use of high-order derivatives. The DEXP transformation enjoys a relevant feature when applied to the local wavenumber function: the scaling-law is in fact independent of the structural index. So, differently from the DEXP transformation applied directly to potential fields, the Local Wavenumber DEXP transformation is fully automatic and may be implemented as a very fast imaging method, mapping every kind of source at the correct depth. Also the simultaneous presence of sources with different homogeneity degree can be easily and correctly treated. The method was applied to synthetic and real examples from Bulgaria and Italy and the results agree well with known information about the causative sources.

The Use of a Code-generating System for the Derivation of the Equations for Wind Turbine Dynamics

Science.gov (United States)

Ganander, Hans

2003-10-01

For many reasons the size of wind turbines on the rapidly growing wind energy market is increasing. Relations between aeroelastic properties of these new large turbines change. Modifications of turbine designs and control concepts are also influenced by growing size. All these trends require development of computer codes for design and certification. Moreover, there is a strong desire for design optimization procedures, which require fast codes. General codes, e.g. finite element codes, normally allow such modifications and improvements of existing wind turbine models. This is done relatively easy. However, the calculation times of such codes are unfavourably long, certainly for optimization use. The use of an automatic code generating system is an alternative for relevance of the two key issues, the code and the design optimization. This technique can be used for rapid generation of codes of particular wind turbine simulation models. These ideas have been followed in the development of new versions of the wind turbine simulation code VIDYN. The equations of the simulation model were derived according to the Lagrange equation and using Mathematica®, which was directed to output the results in Fortran code format. In this way the simulation code is automatically adapted to an actual turbine model, in terms of subroutines containing the equations of motion, definitions of parameters and degrees of freedom. Since the start in 1997, these methods, constituting a systematic way of working, have been used to develop specific efficient calculation codes. The experience with this technique has been very encouraging, inspiring the continued development of new versions of the simulation code as the need has arisen, and the interest for design optimization is growing.

A comparison of coronal mass ejections identified by manual and automatic methods

Directory of Open Access Journals (Sweden)

S. Yashiro

2008-10-01

Full Text Available Coronal mass ejections (CMEs are related to many phenomena (e.g. flares, solar energetic particles, geomagnetic storms, thus compiling of event catalogs is important for a global understanding these phenomena. CMEs have been identified manually for a long time, but in the SOHO era, automatic identification methods are being developed. In order to clarify the advantage and disadvantage of the manual and automatic CME catalogs, we examined the distributions of CME properties listed in the CDAW (manual and CACTus (automatic catalogs. Both catalogs have a good agreement on the wide CMEs (width>120° in their properties, while there is a significant discrepancy on the narrow CMEs (width≤30°: CACTus has a larger number of narrow CMEs than CDAW. We carried out an event-by-event examination of a sample of events and found that the CDAW catalog have missed many narrow CMEs during the solar maximum. Another significant discrepancy was found on the fast CMEs (speed>1000 km/s: the majority of the fast CDAW CMEs are wide and originate from low latitudes, while the fast CACTus CMEs are narrow and originate from all latitudes. Event-by-event examination of a sample of events suggests that CACTus has a problem on the detection of the fast CMEs.

Development of a neutron transport code many-group two-dimensional heterogeneous calculations by the method of characteristics

International Nuclear Information System (INIS)

Petkov, P.T.

2000-01-01

The method of characteristics (MOC) is gaining increased popularity in the reactor physics community all over the world because it gives a new degree of freedom in nuclear reactor analysis. The MARIKO code solves the neutron transport equation by the MOC in two-dimensional real geometry. The domain of solution can be a rectangle or right hexagon with periodic boundary conditions on the outer boundary. Any reasonable symmetry inside the domain can be fully accounted for. The geometry is described in three levels-macro-cells, cells, and regions. The macro-cells and cells can be any polygon. The outer boundary of a region can be any combination of straight line and circular arc segments. Any level of embedded regions is allowed. Procedures for automatic geometry description of hexagonal fuel assemblies and reflector macro-cells have been developed. The initial ray tracing procedure is performed for the full rectangular or hexagonal domain, but only azimuthal angles in the smallest symmetry interval are tracked. (Authors)

ADGEN: An automated adjoint code generator for large-scale sensitivity analysis

International Nuclear Information System (INIS)

Pin, F.G.; Oblow, E.M.; Horwedel, J.E.; Lucius, J.L.

1987-01-01

This paper describes a new automated system, named ADGEN, which makes use of the strengths of computer calculus to automate the costly and time-consuming calculation of derivatives in FORTRAN computer codes, and automatically generate adjoint solutions of computer codes

Monte Carlo burnup codes acceleration using the correlated sampling method

International Nuclear Information System (INIS)

Dieudonne, C.

2013-01-01

For several years, Monte Carlo burnup/depletion codes have appeared, which couple Monte Carlo codes to simulate the neutron transport to deterministic methods, which handle the medium depletion due to the neutron flux. Solving Boltzmann and Bateman equations in such a way allows to track fine 3-dimensional effects and to get rid of multi-group hypotheses done by deterministic solvers. The counterpart is the prohibitive calculation time due to the Monte Carlo solver called at each time step. In this document we present an original methodology to avoid the repetitive and time-expensive Monte Carlo simulations, and to replace them by perturbation calculations: indeed the different burnup steps may be seen as perturbations of the isotopic concentration of an initial Monte Carlo simulation. In a first time we will present this method, and provide details on the perturbative technique used, namely the correlated sampling. In a second time we develop a theoretical model to study the features of the correlated sampling method to understand its effects on depletion calculations. In a third time the implementation of this method in the TRIPOLI-4 code will be discussed, as well as the precise calculation scheme used to bring important speed-up of the depletion calculation. We will begin to validate and optimize the perturbed depletion scheme with the calculation of a REP-like fuel cell depletion. Then this technique will be used to calculate the depletion of a REP-like assembly, studied at beginning of its cycle. After having validated the method with a reference calculation we will show that it can speed-up by nearly an order of magnitude standard Monte-Carlo depletion codes. (author) [fr

Simulation Methods for Design of Networked Power Electronics and Information Systems

Science.gov (United States)

2014-07-01

advanced using a fixed time step. The mathematical formulation of the method was completed and then implemented by using the code generating capability...environment - extending the capability for automatic generation of C code from the system definition to permit automafic generation of VHDL code. [California... implemented allows a design space model to be exported to external simulation tools via application program interfaces (APIs) in those tools, so that a human

A method of automatic data processing in radiometric control

International Nuclear Information System (INIS)

Adonin, V.M.; Gulyukina, N.A.; Nemirov, Yu.V.; Mogil'nitskij, M.I.

1980-01-01

Described is the algorithm for automatic data processing in gamma radiography of products. Rapidity due to application of recurrent evaluation is a specific feature of the processing. Experimental data of by-line control are presented. The results obtained have shown the applicability of automatic signal processing to the testing under industrial conditions, which would permit to increase the testing efficiency to eliminate the subjectivism in assessment of testing results and to improve working conditions

Computer codes for automatic tuning of the beam transport at the UNILAC

International Nuclear Information System (INIS)

Dahl, L.; Ehrich, A.

1984-01-01

For application in routine operation fully automatic computer controlled algorithms are developed for tuning of beam transport elements at the Unilac. Computations, based on emittance measurements, simulate the beam behaviour and evaluate quadrupole settings, in order to produce defined beam properties at specified positions along the accelerator. The interactive program is controlled using a graphic display on which the beam emittances and envelopes are plotted. To align the beam onto the ion-optical axis of the accelerator two automatic computer controlled procedures have been developed. The misalignment of the beam is determined by variation of quadrupole or steering magnet settings with simultaneous measurement of the beam distribution on profile grids. According to the result a pair of steering magnet settings are adjusted to bend the beam on the axis. The effects of computer controlled tuning on beam quality and operation are reported

Automatic validation of numerical solutions

DEFF Research Database (Denmark)

Stauning, Ole

1997-01-01

This thesis is concerned with ``Automatic Validation of Numerical Solutions''. The basic theory of interval analysis and self-validating methods is introduced. The mean value enclosure is applied to discrete mappings for obtaining narrow enclosures of the iterates when applying these mappings...... differential equations, but in this thesis, we describe how to use the methods for enclosing iterates of discrete mappings, and then later use them for discretizing solutions of ordinary differential equations. The theory of automatic differentiation is introduced, and three methods for obtaining derivatives...... are described: The forward, the backward, and the Taylor expansion methods. The three methods have been implemented in the C++ program packages FADBAD/TADIFF. Some examples showing how to use the three metho ds are presented. A feature of FADBAD/TADIFF not present in other automatic differentiation packages...

A method for the automatic quantification of the completeness of pulmonary fissures: evaluation in a database of subjects with severe emphysema

Energy Technology Data Exchange (ETDEWEB)

Rikxoort, Eva M. van; Goldin, Jonathan G.; Galperin-Aizenberg, Maya; Abtin, Fereidoun; Kim, Hyun J.; Lu, Peiyun; Shaw, Greg; Brown, Matthew S. [University of California-Los Angeles, Center for Computer Vision and Imaging Biomarkers and Thoracic Imaging Research Group, Department of Radiological Sciences, David Geffen School of Medicine, Los Angeles, CA (United States); Ginneken, Bram van [Radboud University Nijmegen Medical Centre, Diagnostic Image Analysis Group, Department of Radiology, Nijmegen (Netherlands); University Medical Center Utrecht, Image Sciences Institute, Department of Radiology, Utrecht (Netherlands)

2012-02-15

To propose and evaluate a technique for automatic quantification of fissural completeness from chest computed tomography (CT) in a database of subjects with severe emphysema. Ninety-six CT studies of patients with severe emphysema were included. The lungs, fissures and lobes were automatically segmented. The completeness of the fissures was calculated as the percentage of the lobar border defined by a fissure. The completeness score of the automatic method was compared with a visual consensus read by three radiologists using boxplots, rank sum tests and ROC analysis. The consensus read found 49% (47/96), 15% (14/96) and 67% (64/96) of the right major, right minor and left major fissures to be complete. For all fissures visually assessed as being complete the automatic method resulted in significantly higher completeness scores (mean 92.78%) than for those assessed as being partial or absent (mean 77.16%; all p values <0.001). The areas under the curves for the automatic fissural completeness were 0.88, 0.91 and 0.83 for the right major, right minor and left major fissures respectively. An automatic method is able to quantify fissural completeness in a cohort of subjects with severe emphysema consistent with a visual consensus read of three radiologists. (orig.)

PACS quality control and automatic problem notifier

Science.gov (United States)

Honeyman-Buck, Janice C.; Jones, Douglas; Frost, Meryll M.; Staab, Edward V.

1997-05-01

One side effect of installing a clinical PACS Is that users become dependent upon the technology and in some cases it can be very difficult to revert back to a film based system if components fail. The nature of system failures range from slow deterioration of function as seen in the loss of monitor luminance through sudden catastrophic loss of the entire PACS networks. This paper describes the quality control procedures in place at the University of Florida and the automatic notification system that alerts PACS personnel when a failure has happened or is anticipated. The goal is to recover from a failure with a minimum of downtime and no data loss. Routine quality control is practiced on all aspects of PACS, from acquisition, through network routing, through display, and including archiving. Whenever possible, the system components perform self and between platform checks for active processes, file system status, errors in log files, and system uptime. When an error is detected or a exception occurs, an automatic page is sent to a pager with a diagnostic code. Documentation on each code, trouble shooting procedures, and repairs are kept on an intranet server accessible only to people involved in maintaining the PACS. In addition to the automatic paging system for error conditions, acquisition is assured by an automatic fax report sent on a daily basis to all technologists acquiring PACS images to be used as a cross check that all studies are archived prior to being removed from the acquisition systems. Daily quality control is preformed to assure that studies can be moved from each acquisition and contrast adjustment. The results of selected quality control reports will be presented. The intranet documentation server will be described with the automatic pager system. Monitor quality control reports will be described and the cost of quality control will be quantified. As PACS is accepted as a clinical tool, the same standards of quality control must be established

Position automatic determination technology

International Nuclear Information System (INIS)

1985-10-01

This book tells of method of position determination and characteristic, control method of position determination and point of design, point of sensor choice for position detector, position determination of digital control system, application of clutch break in high frequency position determination, automation technique of position determination, position determination by electromagnetic clutch and break, air cylinder, cam and solenoid, stop position control of automatic guide vehicle, stacker crane and automatic transfer control.

Method for calculating internal radiation and ventilation with the ADINAT heat-flow code

International Nuclear Information System (INIS)

Butkovich, T.R.; Montan, D.N.

1980-01-01

One objective of the spent fuel test in Climax Stock granite (SFTC) is to correctly model the thermal transport, and the changes in the stress field and accompanying displacements from the application of the thermal loads. We have chosen the ADINA and ADINAT finite element codes to do these calculations. ADINAT is a heat transfer code compatible to the ADINA displacement and stress analysis code. The heat flow problem encountered at SFTC requires a code with conduction, radiation, and ventilation capabilities, which the present version of ADINAT does not have. We have devised a method for calculating internal radiation and ventilation with the ADINAT code. This method effectively reproduces the results from the TRUMP multi-dimensional finite difference code, which correctly models radiative heat transport between drift surfaces, conductive and convective thermal transport to and through air in the drifts, and mass flow of air in the drifts. The temperature histories for each node in the finite element mesh calculated with ADINAT using this method can be used directly in the ADINA thermal-mechanical calculation

NAGRADATA. Code key. Geology

International Nuclear Information System (INIS)

Mueller, W.H.; Schneider, B.; Staeuble, J.

1984-01-01

This reference manual provides users of the NAGRADATA system with comprehensive keys to the coding/decoding of geological and technical information to be stored in or retreaved from the databank. Emphasis has been placed on input data coding. When data is retreaved the translation into plain language of stored coded information is done automatically by computer. Three keys each, list the complete set of currently defined codes for the NAGRADATA system, namely codes with appropriate definitions, arranged: 1. according to subject matter (thematically) 2. the codes listed alphabetically and 3. the definitions listed alphabetically. Additional explanation is provided for the proper application of the codes and the logic behind the creation of new codes to be used within the NAGRADATA system. NAGRADATA makes use of codes instead of plain language for data storage; this offers the following advantages: speed of data processing, mainly data retrieval, economies of storage memory requirements, the standardisation of terminology. The nature of this thesaurian type 'key to codes' makes it impossible to either establish a final form or to cover the entire spectrum of requirements. Therefore, this first issue of codes to NAGRADATA must be considered to represent the current state of progress of a living system and future editions will be issued in a loose leave ringbook system which can be updated by an organised (updating) service. (author)

MIAQuant, a novel system for automatic segmentation, measurement, and localization comparison of different biomarkers from serialized histological slices

Directory of Open Access Journals (Sweden)

Elena Casiraghi

2017-11-01

Full Text Available In the clinical practice, automatic image analysis methods quickly quantizing histological results by objective and replicable methods are getting more and more necessary and widespread. Despite several commercial software products are available for this task, they are very little flexible, and provided as black boxes without modifiable source code. To overcome the aforementioned problems, we employed the commonly used MATLAB platform to develop an automatic method, MIAQuant, for the analysis of histochemical and immunohistochemical images, stained with various methods and acquired by different tools. It automatically extracts and quantifies markers characterized by various colors and shapes; furthermore, it aligns contiguous tissue slices stained by different markers and overlaps them with differing colors for visual comparison of their localization. Application of MIAQuant for clinical research fields, such as oncology and cardiovascular disease studies, has proven its efficacy, robustness and flexibility with respect to various problems; we highlight that, the flexibility of MIAQuant makes it an important tool to be exploited for basic researches where needs are constantly changing. MIAQuant software and its user manual are freely available for clinical studies, pathological research, and diagnosis.

Lattice Boltzmann method fundamentals and engineering applications with computer codes

CERN Document Server

Mohamad, A A

2014-01-01

Introducing the Lattice Boltzmann Method in a readable manner, this book provides detailed examples with complete computer codes. It avoids the most complicated mathematics and physics without scarifying the basic fundamentals of the method.

Container-code recognition system based on computer vision and deep neural networks

Science.gov (United States)

Liu, Yi; Li, Tianjian; Jiang, Li; Liang, Xiaoyao

2018-04-01

Automatic container-code recognition system becomes a crucial requirement for ship transportation industry in recent years. In this paper, an automatic container-code recognition system based on computer vision and deep neural networks is proposed. The system consists of two modules, detection module and recognition module. The detection module applies both algorithms based on computer vision and neural networks, and generates a better detection result through combination to avoid the drawbacks of the two methods. The combined detection results are also collected for online training of the neural networks. The recognition module exploits both character segmentation and end-to-end recognition, and outputs the recognition result which passes the verification. When the recognition module generates false recognition, the result will be corrected and collected for online training of the end-to-end recognition sub-module. By combining several algorithms, the system is able to deal with more situations, and the online training mechanism can improve the performance of the neural networks at runtime. The proposed system is able to achieve 93% of overall recognition accuracy.

Automatic methods of the processing of data from track detectors on the basis of the PAVICOM facility

Science.gov (United States)

Aleksandrov, A. B.; Goncharova, L. A.; Davydov, D. A.; Publichenko, P. A.; Roganova, T. M.; Polukhina, N. G.; Feinberg, E. L.

2007-02-01

New automatic methods essentially simplify and increase the rate of the processing of data from track detectors. This provides a possibility of processing large data arrays and considerably improves their statistical significance. This fact predetermines the development of new experiments which plan to use large-volume targets, large-area emulsion, and solid-state track detectors [1]. In this regard, the problem of training qualified physicists who are capable of operating modern automatic equipment is very important. Annually, about ten Moscow students master the new methods, working at the Lebedev Physical Institute at the PAVICOM facility [2 4]. Most students specializing in high-energy physics are only given an idea of archaic manual methods of the processing of data from track detectors. In 2005, on the basis of the PAVICOM facility and the physicstraining course of Moscow State University, a new training work was prepared. This work is devoted to the determination of the energy of neutrons passing through a nuclear emulsion. It provides the possibility of acquiring basic practical skills of the processing of data from track detectors using automatic equipment and can be included in the educational process of students of any physical faculty. Those who have mastered the methods of automatic data processing in a simple and pictorial example of track detectors will be able to apply their knowledge in various fields of science and technique. Formulation of training works for pregraduate and graduate students is a new additional aspect of application of the PAVICOM facility described earlier in [4].

AUTOMR: An automatic processing program system for the molecular replacement method

International Nuclear Information System (INIS)

Matsuura, Yoshiki

1991-01-01

An automatic processing program system of the molecular replacement method AUTMR is presented. The program solves the initial model of the target crystal structure using a homologous molecule as the search model. It processes the structure-factor calculation of the model molecule, the rotation function, the translation function and the rigid-group refinement successively in one computer job. Test calculations were performed for six protein crystals and the structures were solved in all of these cases. (orig.)

Technical characterization by image analysis: an automatic method of mineralogical studies

International Nuclear Information System (INIS)

Oliveira, J.F. de

1988-01-01

The application of a modern method of image analysis fully automated for the study of grain size distribution modal assays, degree of liberation and mineralogical associations is discussed. The image analyser is interfaced with a scanning electron microscope and an energy dispersive X-rays analyser. The image generated by backscattered electrons is analysed automatically and the system has been used in accessment studies of applied mineralogy as well as in process control in the mining industry. (author) [pt

Segmentation of MR images via discriminative dictionary learning and sparse coding: Application to hippocampus labeling

OpenAIRE

Tong, Tong; Wolz, Robin; Coupe, Pierrick; Hajnal, Joseph V.; Rueckert, Daniel

2013-01-01

International audience; We propose a novel method for the automatic segmentation of brain MRI images by using discriminative dictionary learning and sparse coding techniques. In the proposed method, dictionaries and classifiers are learned simultaneously from a set of brain atlases, which can then be used for the reconstruction and segmentation of an unseen target image. The proposed segmentation strategy is based on image reconstruction, which is in contrast to most existing atlas-based labe...

An image-based automatic recognition method for the flowering stage of maize

Science.gov (United States)

Yu, Zhenghong; Zhou, Huabing; Li, Cuina

2018-03-01

In this paper, we proposed an image-based approach for automatic recognizing the flowering stage of maize. A modified HOG/SVM detection framework is first adopted to detect the ears of maize. Then, we use low-rank matrix recovery technology to precisely extract the ears at pixel level. At last, a new feature called color gradient histogram, as an indicator, is proposed to determine the flowering stage. Comparing experiment has been carried out to testify the validity of our method and the results indicate that our method can meet the demand for practical observation.

Compatibility of global environmental assessment methods of buildings with an Egyptian energy code

Directory of Open Access Journals (Sweden)

Amal Kamal Mohamed Shamseldin

2017-04-01

Full Text Available Several environmental assessment methods of buildings had emerged over the world to set environmental classifications for buildings, such as the American method “Leadership in Energy and Environmental Design” (LEED the most widespread one. Several countries decided to put their own assessment methods to catch up with the previous orientation, such as Egypt. The main goal of putting the Egyptian method was to impose the voluntary local energy efficiency codes. Through a local survey, it was clearly noted that many of the construction makers in Egypt do not even know the local method, and whom are interested in the environmental assessment of buildings seek to apply LEED rather than anything else. Therefore, several questions appear about the American method compatibility with the Egyptian energy codes – that contain the most exact characteristics and requirements and give the outmost credible energy efficiency results for buildings in Egypt-, and the possibility of finding another global method that gives closer results to those of the Egyptian codes, especially with the great variety of energy efficiency measurement approaches used among the different assessment methods. So, the researcher is trying to find the compatibility of using non-local assessment methods with the local energy efficiency codes. Thus, if the results are not compatible, the Egyptian government should take several steps to increase the local building sector awareness of the Egyptian method to benefit these codes, and it should begin to enforce it within the building permits after a proper guidance and feedback.

Automatic ultrasound image enhancement for 2D semi-automatic breast-lesion segmentation

Science.gov (United States)

Lu, Kongkuo; Hall, Christopher S.

2014-03-01

Breast cancer is the fastest growing cancer, accounting for 29%, of new cases in 2012, and second leading cause of cancer death among women in the United States and worldwide. Ultrasound (US) has been used as an indispensable tool for breast cancer detection/diagnosis and treatment. In computer-aided assistance, lesion segmentation is a preliminary but vital step, but the task is quite challenging in US images, due to imaging artifacts that complicate detection and measurement of the suspect lesions. The lesions usually present with poor boundary features and vary significantly in size, shape, and intensity distribution between cases. Automatic methods are highly application dependent while manual tracing methods are extremely time consuming and have a great deal of intra- and inter- observer variability. Semi-automatic approaches are designed to counterbalance the advantage and drawbacks of the automatic and manual methods. However, considerable user interaction might be necessary to ensure reasonable segmentation for a wide range of lesions. This work proposes an automatic enhancement approach to improve the boundary searching ability of the live wire method to reduce necessary user interaction while keeping the segmentation performance. Based on the results of segmentation of 50 2D breast lesions in US images, less user interaction is required to achieve desired accuracy, i.e. < 80%, when auto-enhancement is applied for live-wire segmentation.

Simple Methods for Scanner Drift Normalization Validated for Automatic Segmentation of Knee Magnetic Resonance Imaging

DEFF Research Database (Denmark)

Dam, Erik Bjørnager

2018-01-01

Scanner drift is a well-known magnetic resonance imaging (MRI) artifact characterized by gradual signal degradation and scan intensity changes over time. In addition, hardware and software updates may imply abrupt changes in signal. The combined effects are particularly challenging for automatic...... image analysis methods used in longitudinal studies. The implication is increased measurement variation and a risk of bias in the estimations (e.g. in the volume change for a structure). We proposed two quite different approaches for scanner drift normalization and demonstrated the performance...... for segmentation of knee MRI using the fully automatic KneeIQ framework. The validation included a total of 1975 scans from both high-field and low-field MRI. The results demonstrated that the pre-processing method denoted Atlas Affine Normalization significantly removed scanner drift effects and ensured...

Method of semi-automatic high precision potentiometric titration for characterization of uranium compounds

International Nuclear Information System (INIS)

Cristiano, Barbara Fernandes G.; Dias, Fabio C.; Barros, Pedro D. de; Araujo, Radier Mario S. de; Delgado, Jose Ubiratan; Silva, Jose Wanderley S. da; Lopes, Ricardo T.

2011-01-01

The method of high precision potentiometric titration is widely used in the certification and characterization of uranium compounds. In order to reduce the analysis and diminish the influence if the annalist, a semi-automatic version of the method was developed at the safeguards laboratory of the CNEN-RJ, Brazil. The method was applied with traceability guaranteed by use of primary standard of potassium dichromate. The standard uncertainty combined in the determination of concentration of total uranium was of the order of 0.01%, which is better related to traditionally methods used by the nuclear installations which is of the order of 0.1%

Automatic method for selective enhancement of different tissue densities at digital chest radiography

International Nuclear Information System (INIS)

McNitt-Gray, M.F.; Taira, R.K.; Eldredge, S.L.; Razavi, M.

1991-01-01

This paper reports that digital chest radiographs often are too bright and/or lack contrast when viewed on a video display. The authors have developed a method that can automatically provide a series of look-up tables that selectively enhance the radiographically soft or dense tissues on a digital chest radiograph. This reduces viewer interaction and improves displayed image quality. On the basis of a histogram analysis, gray-level ranges are approximated for the patient background, radiographically soft tissues, and radiographically dense tissues. A series of look-up tables is automatically created by varying the contrast in each range to achieve a level of enhancement for a selected tissue range. This is repeated for differing amounts of enhancement and for each tissue range. This allows the viewer to interactively select a tissue density range and degree of enhancement at the time of display via precalculated look-up tables. Preclinical trials in pediatric radiology using computed radiography images show that this method reduces viewer interaction and improves or maintains the displayed image quality

Automatic Generation of Algorithms for the Statistical Analysis of Planetary Nebulae Images

Science.gov (United States)

Fischer, Bernd

2004-01-01

Analyzing data sets collected in experiments or by observations is a Core scientific activity. Typically, experimentd and observational data are &aught with uncertainty, and the analysis is based on a statistical model of the conjectured underlying processes, The large data volumes collected by modern instruments make computer support indispensible for this. Consequently, scientists spend significant amounts of their time with the development and refinement of the data analysis programs. AutoBayes [GF+02, FS03] is a fully automatic synthesis system for generating statistical data analysis programs. Externally, it looks like a compiler: it takes an abstract problem specification and translates it into executable code. Its input is a concise description of a data analysis problem in the form of a statistical model as shown in Figure 1; its output is optimized and fully documented C/C++ code which can be linked dynamically into the Matlab and Octave environments. Internally, however, it is quite different: AutoBayes derives a customized algorithm implementing the given model using a schema-based process, and then further refines and optimizes the algorithm into code. A schema is a parameterized code template with associated semantic constraints which define and restrict the template s applicability. The schema parameters are instantiated in a problem-specific way during synthesis as AutoBayes checks the constraints against the original model or, recursively, against emerging sub-problems. AutoBayes schema library contains problem decomposition operators (which are justified by theorems in a formal logic in the domain of Bayesian networks) as well as machine learning algorithms (e.g., EM, k-Means) and nu- meric optimization methods (e.g., Nelder-Mead simplex, conjugate gradient). AutoBayes augments this schema-based approach by symbolic computation to derive closed-form solutions whenever possible. This is a major advantage over other statistical data analysis systems

Sparse coding of the modulation spectrum for noise-robust automatic speech recognition

NARCIS (Netherlands)

Ahmadi, S.; Ahadi, S.M.; Cranen, B.; Boves, L.W.J.

2014-01-01

The full modulation spectrum is a high-dimensional representation of one-dimensional audio signals. Most previous research in automatic speech recognition converted this very rich representation into the equivalent of a sequence of short-time power spectra, mainly to simplify the computation of the

Automatically explaining machine learning prediction results: a demonstration on type 2 diabetes risk prediction.

Science.gov (United States)

Luo, Gang

2016-01-01

Predictive modeling is a key component of solutions to many healthcare problems. Among all predictive modeling approaches, machine learning methods often achieve the highest prediction accuracy, but suffer from a long-standing open problem precluding their widespread use in healthcare. Most machine learning models give no explanation for their prediction results, whereas interpretability is essential for a predictive model to be adopted in typical healthcare settings. This paper presents the first complete method for automatically explaining results for any machine learning predictive model without degrading accuracy. We did a computer coding implementation of the method. Using the electronic medical record data set from the Practice Fusion diabetes classification competition containing patient records from all 50 states in the United States, we demonstrated the method on predicting type 2 diabetes diagnosis within the next year. For the champion machine learning model of the competition, our method explained prediction results for 87.4 % of patients who were correctly predicted by the model to have type 2 diabetes diagnosis within the next year. Our demonstration showed the feasibility of automatically explaining results for any machine learning predictive model without degrading accuracy.

FARGO3D: A NEW GPU-ORIENTED MHD CODE

Energy Technology Data Exchange (ETDEWEB)

Benitez-Llambay, Pablo [Instituto de Astronomía Teórica y Experimental, Observatorio Astronónomico, Universidad Nacional de Córdoba. Laprida 854, X5000BGR, Córdoba (Argentina); Masset, Frédéric S., E-mail: pbllambay@oac.unc.edu.ar, E-mail: masset@icf.unam.mx [Instituto de Ciencias Físicas, Universidad Nacional Autónoma de México (UNAM), Apdo. Postal 48-3,62251-Cuernavaca, Morelos (Mexico)

2016-03-15

We present the FARGO3D code, recently publicly released. It is a magnetohydrodynamics code developed with special emphasis on the physics of protoplanetary disks and planet–disk interactions, and parallelized with MPI. The hydrodynamics algorithms are based on finite-difference upwind, dimensionally split methods. The magnetohydrodynamics algorithms consist of the constrained transport method to preserve the divergence-free property of the magnetic field to machine accuracy, coupled to a method of characteristics for the evaluation of electromotive forces and Lorentz forces. Orbital advection is implemented, and an N-body solver is included to simulate planets or stars interacting with the gas. We present our implementation in detail and present a number of widely known tests for comparison purposes. One strength of FARGO3D is that it can run on either graphical processing units (GPUs) or central processing units (CPUs), achieving large speed-up with respect to CPU cores. We describe our implementation choices, which allow a user with no prior knowledge of GPU programming to develop new routines for CPUs, and have them translated automatically for GPUs.

TASS/SMR Code Topical Report for SMART Plant, Vol. I: Code Structure, System Models, and Solution Methods

Energy Technology Data Exchange (ETDEWEB)

Chung, Young Jong; Kim, Soo Hyoung; Kim, See Darl (and others)

2008-10-15

The TASS/SMR code has been developed with domestic technologies for the safety analysis of the SMART plant which is an integral type pressurized water reactor. It can be applied to the analysis of design basis accidents including non-LOCA (loss of coolant accident) and LOCA of the SMART plant. The TASS/SMR code can be applied to any plant regardless of the structural characteristics of a reactor since the code solves the same governing equations for both the primary and secondary system. The code has been developed to meet the requirements of the safety analysis code. This report describes the overall structure of the TASS/SMR, input processing, and the processes of a steady state and transient calculations. In addition, basic differential equations, finite difference equations, state relationships, and constitutive models are described in the report. First, the conservation equations, a discretization process for numerical analysis, search method for state relationship are described. Then, a core power model, heat transfer models, physical models for various components, and control and trip models are explained.

A method for generating subgroup parameters from resonance tables and the SPART code

International Nuclear Information System (INIS)

Devan, K.; Mohanakrishnan, P.

1995-01-01

A method for generating subgroup or band parameters from resonance tables is described. A computer code SPART was written using this method. This code generates the subgroup parameters for any number of bands within the specified broad groups at different temperatures by reading the required input data from the binary cross section library in the Cadarache format. The results obtained with SPART code for two bands were compared with that obtained from GROUPIE code and a good agreement was obtained. Results of the generation of subgroup parameters in four bands for sample case of 239 Pu from resonance tables of Cadarache Ver.2 library is also presented. 6 refs, 2 tabs

Implementation of the SAMPO computer code in the Cyber 170-750

International Nuclear Information System (INIS)

Chagas, E.F.; Liguori Neto, R.; Gomes, P.R.S.

1985-01-01

The code SAMPO, in this available version, incorporates algorithms that determine energy, eficiency and peak shape. The code also includes processing subroutines that provide automatic surveys of peaks raising all their characteristics. The handling of the code has been improved and its analysing capacity in each region of the spectrum has been amplified. Practical information regarding the use of the code is enclosed. Tests made guarantee the good performance of the code SAMPO in the Cyber system-IEAv. (Author) [pt

Licensing in BE system code calculations. Applications and uncertainty evaluation by CIAU method

International Nuclear Information System (INIS)

Petruzzi, Alessandro; D'Auria, Francesco

2007-01-01

The evaluation of uncertainty constitutes the necessary supplement of Best Estimate (BE) calculations performed to understand accident scenarios in water cooled nuclear reactors. The needs come from the imperfection of computational tools on the one side and from the interest in using such tool to get more precise evaluation of safety margins. In the present paper the approaches to uncertainty are outlined and the CIAU (Code with capability of Internal Assessment of Uncertainty) method proposed by the University of Pisa is described including ideas at the basis and results from applications. Two approaches are distinguished that are characterized as 'propagation of code input uncertainty' and 'propagation of code output errors'. For both methods, the thermal-hydraulic code is at the centre of the process of uncertainty evaluation: in the former case the code itself is adopted to compute the error bands and to propagate the input errors, in the latter case the errors in code application to relevant measurements are used to derive the error bands. The CIAU method exploits the idea of the 'status approach' for identifying the thermal-hydraulic conditions of an accident in any Nuclear Power Plant (NPP). Errors in predicting such status are derived from the comparison between predicted and measured quantities and, in the stage of the application of the method, are used to compute the uncertainty. (author)

Improvement and automatization of a proportional alpha-beta counting system - FAG

International Nuclear Information System (INIS)

German, U.; Levinson, S.; Pelled, O.; Shemesh, Y.; Assido, H.

1997-01-01

An alpha and beta counting system - FAG*, for planchette samples is operated at the Health Physics department's laboratory of the NRCN. The original operation mode of the system was based on manual tasks handled by the FHT1 100 electronics. An option for a basic computer keyboard operation was available too. A computer with an appropriate I/O card was connected to the system and a new operating program was developed which enables full automatic control of the various components. The program includes activity calculations and statistical checks as well as data management. A bar-code laser system for sample number reading was integrated into the Alpha-Beta automatic counting system. The sample identification by means of an attached bar-code label enables unmistakable and reliable attribution of results to the counted sample. authors)

Research on coding and decoding method for digital levels

Energy Technology Data Exchange (ETDEWEB)

Tu Lifen; Zhong Sidong

2011-01-20

A new coding and decoding method for digital levels is proposed. It is based on an area-array CCD sensor and adopts mixed coding technology. By taking advantage of redundant information in a digital image signal, the contradiction that the field of view and image resolution restrict each other in a digital level measurement is overcome, and the geodetic leveling becomes easier. The experimental results demonstrate that the uncertainty of measurement is 1mm when the measuring range is between 2m and 100m, which can meet practical needs.

Research on coding and decoding method for digital levels.

Science.gov (United States)

Tu, Li-fen; Zhong, Si-dong

2011-01-20

A new coding and decoding method for digital levels is proposed. It is based on an area-array CCD sensor and adopts mixed coding technology. By taking advantage of redundant information in a digital image signal, the contradiction that the field of view and image resolution restrict each other in a digital level measurement is overcome, and the geodetic leveling becomes easier. The experimental results demonstrate that the uncertainty of measurement is 1 mm when the measuring range is between 2 m and 100 m, which can meet practical needs.

Development of automatic editing system for MCNP library 'autonj'

International Nuclear Information System (INIS)

Maekawa, Fujio; Sakurai, Kiyoshi; Kume, Etsuo; Nomura, Yasushi; Kosako, Kazuaki; Kawasaki, Nobuo; Naito, Yoshitaka

1999-12-01

As an activity of the MCNP High-Temperature Library Production Working Group under the Nuclear Code Evaluation Special Committee of Nuclear Code Committee, the automatic editing system for MCNP library 'autonj' was developed. The autonj includes the NJOY-97 code as its main body, and is a system that enables us to easily produce cross section libraries for MCNP from evaluated nuclear data files such as JENDL-3.2. A temperature dependent library at six temperature points based on JENDL-3.2 was produced by using autonj. The autonj system and the temperature dependent library were installed on the JAERI AP3000 computer. (author)

Robot-assisted automatic ultrasound calibration.

Science.gov (United States)

Aalamifar, Fereshteh; Cheng, Alexis; Kim, Younsu; Hu, Xiao; Zhang, Haichong K; Guo, Xiaoyu; Boctor, Emad M

2016-10-01

Ultrasound (US) calibration is the process of determining the unknown transformation from a coordinate frame such as the robot's tooltip to the US image frame and is a necessary task for any robotic or tracked US system. US calibration requires submillimeter-range accuracy for most applications, but it is a time-consuming and repetitive task. We provide a new framework for automatic US calibration with robot assistance and without the need for temporal calibration. US calibration based on active echo (AE) phantom was previously proposed, and its superiority over conventional cross-wire phantom-based calibration was shown. In this work, we use AE to guide the robotic arm motion through the process of data collection; we combine the capability of the AE point to localize itself in the frame of the US image with the automatic motion of the robotic arm to provide a framework for calibrating the arm to the US image automatically. We demonstrated the efficacy of the automated method compared to the manual method through experiments. To highlight the necessity of frequent ultrasound calibration, it is demonstrated that the calibration precision changed from 1.67 to 3.20 mm if the data collection is not repeated after a dismounting/mounting of the probe holder. In a large data set experiment, similar reconstruction precision of automatic and manual data collection was observed, while the time was reduced by 58 %. In addition, we compared ten automatic calibrations with ten manual ones, each performed in 15 min, and showed that all the automatic ones could converge in the case of setting the initial matrix as identity, while this was not achieved by manual data sets. Given the same initial matrix, the repeatability of the automatic was [0.46, 0.34, 0.80, 0.47] versus [0.42, 0.51, 0.98, 1.15] mm in the manual case for the US image four corners. The submillimeter accuracy requirement of US calibration makes frequent data collections unavoidable. We proposed an automated

Parallelization of the AliRoot event reconstruction by performing a semi- automatic source-code transformation

CERN Multimedia

CERN. Geneva

2012-01-01

side bus or processor interconnections. Parallelism can only result in performance gain, if the memory usage is optimized, memory locality improved and the communication between threads is minimized. But the domain of concurrent programming has become a field for highly skilled experts, as the implementation of multithreading is difficult, error prone and labor intensive. A full re-implementation for parallel execution of existing offline frameworks, like AliRoot in ALICE, is thus unaffordable. An alternative method, is to use a semi-automatic source-to-source transformation for getting a simple parallel design, with almost no interference between threads. This reduces the need of rewriting the develop...

Automatic Method for Controlling the Iodine Adsorption Number in Carbon Black Oil Furnaces

Directory of Open Access Journals (Sweden)

Zečević, N.

2008-12-01

Full Text Available There are numerous of different inlet process factors in carbon black oil furnaces which must be continuously and automatically adjusted, due to stable quality of final product. The most important six inlet process factors in carbon black oil-furnaces are:1. volume flow of process air for combustion2. temperature of process air for combustion3. volume flow of natural gas for insurance the necessary heat for thermal reaction of conversionthe hydrocarbon oil feedstock in oil-furnace carbon black4. mass flow rate of hydrocarbon oil feedstock5. type and quantity of additive for adjustment the structure of oil-furnace carbon black6. quantity and position of the quench water for cooling the reaction of oil-furnace carbon black.The control of oil-furnace carbon black adsorption capacity is made with mass flow rate of hydrocarbon feedstock, which is the most important inlet process factor. Oil-furnace carbon black adsorption capacity in industrial process is determined with laboratory analyze of iodine adsorption number. It is shown continuously and automatically method for controlling iodine adsorption number in carbon black oil-furnaces to get as much as possible efficient control of adsorption capacity. In the proposed method it can be seen the correlation between qualitatively-quantitatively composition of the process tail gasses in the production of oil-furnace carbon black and relationship between air for combustion and hydrocarbon feedstock. It is shown that the ratio between air for combustion and hydrocarbon oil feedstock is depended of adsorption capacity summarized by iodine adsorption number, regarding to BMCI index of hydrocarbon oil feedstock.The mentioned correlation can be seen through the figures from 1. to 4. From the whole composition of the process tail gasses the best correlation for continuously and automatically control of iodine adsorption number is show the volume fraction of methane. The volume fraction of methane in the

Robust methods for automatic image-to-world registration in cone-beam CT interventional guidance

International Nuclear Information System (INIS)

Dang, H.; Otake, Y.; Schafer, S.; Stayman, J. W.; Kleinszig, G.; Siewerdsen, J. H.

2012-01-01

Purpose: Real-time surgical navigation relies on accurate image-to-world registration to align the coordinate systems of the image and patient. Conventional manual registration can present a workflow bottleneck and is prone to manual error and intraoperator variability. This work reports alternative means of automatic image-to-world registration, each method involving an automatic registration marker (ARM) used in conjunction with C-arm cone-beam CT (CBCT). The first involves a Known-Model registration method in which the ARM is a predefined tool, and the second is a Free-Form method in which the ARM is freely configurable. Methods: Studies were performed using a prototype C-arm for CBCT and a surgical tracking system. A simple ARM was designed with markers comprising a tungsten sphere within infrared reflectors to permit detection of markers in both x-ray projections and by an infrared tracker. The Known-Model method exercised a predefined specification of the ARM in combination with 3D-2D registration to estimate the transformation that yields the optimal match between forward projection of the ARM and the measured projection images. The Free-Form method localizes markers individually in projection data by a robust Hough transform approach extended from previous work, backprojected to 3D image coordinates based on C-arm geometric calibration. Image-domain point sets were transformed to world coordinates by rigid-body point-based registration. The robustness and registration accuracy of each method was tested in comparison to manual registration across a range of body sites (head, thorax, and abdomen) of interest in CBCT-guided surgery, including cases with interventional tools in the radiographic scene. Results: The automatic methods exhibited similar target registration error (TRE) and were comparable or superior to manual registration for placement of the ARM within ∼200 mm of C-arm isocenter. Marker localization in projection data was robust across all

Automatic SIMD parallelization of embedded applications based on pattern recognition

NARCIS (Netherlands)

Manniesing, R.; Karkowski, I.P.; Corporaal, H.

2000-01-01

This paper investigates the potential for automatic mapping of typical embedded applications to architectures with multimedia instruction set extensions. For this purpose a (pattern matching based) code transformation engine is used, which involves a three-step process of matching, condition

A GPU code for analytic continuation through a sampling method

Directory of Open Access Journals (Sweden)

Johan Nordström

2016-01-01

Full Text Available We here present a code for performing analytic continuation of fermionic Green’s functions and self-energies as well as bosonic susceptibilities on a graphics processing unit (GPU. The code is based on the sampling method introduced by Mishchenko et al. (2000, and is written for the widely used CUDA platform from NVidia. Detailed scaling tests are presented, for two different GPUs, in order to highlight the advantages of this code with respect to standard CPU computations. Finally, as an example of possible applications, we provide the analytic continuation of model Gaussian functions, as well as more realistic test cases from many-body physics.

Enhancement of Pre-and Post-Processing Capability of the CUPID code

Energy Technology Data Exchange (ETDEWEB)

Kim, Jongtae; Park, Ik Kyu; Yoon, Hanyoung [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

2014-05-15

To simulate heat transfer and fluid flow in a field with a complicated geometry, an unstructured mesh is popularly used. Most commercial CFD (Computational Fluid Dynamics) solvers are based on an unstructured mesh technology. An advantage of using unstructured meshes for a field simulation is reduced man-hours by automatic mesh generation compared to a traditional structured mesh generation, which requires a huge amount of man-hours to discretized a complex geometry. Initially, unstructured meshes that can be generated automatically are limited to regular cell elements such as tetrahedron, pyramid, prism, or hexahedron. The multi-dimensional multi-phase flow solver, CUPID, has been developed in the context of an unstructured mesh finite volume method (FVM). Its numerical formulation and programming structure is independent of the number of faces surrounding the computational cells. Thus, it can be easily extended into polyhedral unstructured meshes. In this study, new tools for enhancing the pre- and post-processing capabilities of CUPID are proposed. They are based on an open-source CFD tool box OpenFOAM. A goal of this study is an extension of the applicability of the CUPID code by improving the mesh and solution treatment of the code.

GPU-accelerated 3D neutron diffusion code based on finite difference method

Energy Technology Data Exchange (ETDEWEB)

Xu, Q.; Yu, G.; Wang, K. [Dept. of Engineering Physics, Tsinghua Univ. (China)

2012-07-01

Finite difference method, as a traditional numerical solution to neutron diffusion equation, although considered simpler and more precise than the coarse mesh nodal methods, has a bottle neck to be widely applied caused by the huge memory and unendurable computation time it requires. In recent years, the concept of General-Purpose computation on GPUs has provided us with a powerful computational engine for scientific research. In this study, a GPU-Accelerated multi-group 3D neutron diffusion code based on finite difference method was developed. First, a clean-sheet neutron diffusion code (3DFD-CPU) was written in C++ on the CPU architecture, and later ported to GPUs under NVIDIA's CUDA platform (3DFD-GPU). The IAEA 3D PWR benchmark problem was calculated in the numerical test, where three different codes, including the original CPU-based sequential code, the HYPRE (High Performance Pre-conditioners)-based diffusion code and CITATION, were used as counterpoints to test the efficiency and accuracy of the GPU-based program. The results demonstrate both high efficiency and adequate accuracy of the GPU implementation for neutron diffusion equation. A speedup factor of about 46 times was obtained, using NVIDIA's Geforce GTX470 GPU card against a 2.50 GHz Intel Quad Q9300 CPU processor. Compared with the HYPRE-based code performing in parallel on an 8-core tower server, the speedup of about 2 still could be observed. More encouragingly, without any mathematical acceleration technology, the GPU implementation ran about 5 times faster than CITATION which was speeded up by using the SOR method and Chebyshev extrapolation technique. (authors)

GPU-accelerated 3D neutron diffusion code based on finite difference method

International Nuclear Information System (INIS)

Xu, Q.; Yu, G.; Wang, K.

2012-01-01

Finite difference method, as a traditional numerical solution to neutron diffusion equation, although considered simpler and more precise than the coarse mesh nodal methods, has a bottle neck to be widely applied caused by the huge memory and unendurable computation time it requires. In recent years, the concept of General-Purpose computation on GPUs has provided us with a powerful computational engine for scientific research. In this study, a GPU-Accelerated multi-group 3D neutron diffusion code based on finite difference method was developed. First, a clean-sheet neutron diffusion code (3DFD-CPU) was written in C++ on the CPU architecture, and later ported to GPUs under NVIDIA's CUDA platform (3DFD-GPU). The IAEA 3D PWR benchmark problem was calculated in the numerical test, where three different codes, including the original CPU-based sequential code, the HYPRE (High Performance Pre-conditioners)-based diffusion code and CITATION, were used as counterpoints to test the efficiency and accuracy of the GPU-based program. The results demonstrate both high efficiency and adequate accuracy of the GPU implementation for neutron diffusion equation. A speedup factor of about 46 times was obtained, using NVIDIA's Geforce GTX470 GPU card against a 2.50 GHz Intel Quad Q9300 CPU processor. Compared with the HYPRE-based code performing in parallel on an 8-core tower server, the speedup of about 2 still could be observed. More encouragingly, without any mathematical acceleration technology, the GPU implementation ran about 5 times faster than CITATION which was speeded up by using the SOR method and Chebyshev extrapolation technique. (authors)

Semi-automatic version of the potentiometric titration method for characterization of uranium compounds.

Science.gov (United States)

Cristiano, Bárbara F G; Delgado, José Ubiratan; da Silva, José Wanderley S; de Barros, Pedro D; de Araújo, Radier M S; Dias, Fábio C; Lopes, Ricardo T

2012-09-01

The potentiometric titration method was used for characterization of uranium compounds to be applied in intercomparison programs. The method is applied with traceability assured using a potassium dichromate primary standard. A semi-automatic version was developed to reduce the analysis time and the operator variation. The standard uncertainty in determining the total concentration of uranium was around 0.01%, which is suitable for uranium characterization and compatible with those obtained by manual techniques. Copyright © 2012 Elsevier Ltd. All rights reserved.

GetData Digitizing Program Code: Description, Testing, Training

International Nuclear Information System (INIS)

Taova, S.

2013-01-01

90 percents of compilation in our center is obtained by data digitizing. So we are rather interested in the development of different techniques of data digitizing. Plots containing a great amount of points and solid lines are most complicated for digitizing. From our point of view including to the Exfor-Digitizer procedures of automatic or semi-automatic digitizing will allow to simplify significantly this process. We managed to test some free available program codes. Program GETDATA Graph Digitizer (www.getdata- graph-digitizer.com) looks more suitable for our purposes. GetData Graph Digitizer is a program for digitizing graphs, plots and maps. Main features of GetData Graph Digitizer are: - supported graphics formats are TIFF, JPEG, BMP and PCX; - two algorithms for automatic digitizing; - convenient manual digitizing; - reorder tool for easy points reordering; - save/open workspace, which allows to save the work and return to it later; - obtained data can be exported to the clipboard; - export to the formats: TXT (text file), XLS (MS Excel), XML, DXF (AutoCAD) and EPS (PostScript). GetData Graph Digitizer includes two algorithms for automatic digitizing. Auto trace lines: This method is designed to digitize solid lines. Choose the starting point, and the program will trace the line, stopping at it's end. To trace the line use Operations =>Auto trace lines menu or context menu ('Auto trace lines' item). To choose starting point click left mouse button, or click right mouse button to additionally choose direction for line tracing. Digitize area: The second way is to set digitizing area. This method works for any type of lines, including dashed lines. Data points are set at the intersection of grid with the line. You can choose the type of grid (X grid or Y grid), and set the distance between grid lines. You can also make the grid be shifted in such a way, that it will pass through a specific X (or Y) value. To digitize area use Operations →Digitize area menu

AN AUTOMATIC OPTICAL AND SAR IMAGE REGISTRATION METHOD USING ITERATIVE MULTI-LEVEL AND REFINEMENT MODEL

Directory of Open Access Journals (Sweden)

C. Xu

2016-06-01

Full Text Available Automatic image registration is a vital yet challenging task, particularly for multi-sensor remote sensing images. Given the diversity of the data, it is unlikely that a single registration algorithm or a single image feature will work satisfactorily for all applications. Focusing on this issue, the mainly contribution of this paper is to propose an automatic optical-to-SAR image registration method using –level and refinement model: Firstly, a multi-level strategy of coarse-to-fine registration is presented, the visual saliency features is used to acquire coarse registration, and then specific area and line features are used to refine the registration result, after that, sub-pixel matching is applied using KNN Graph. Secondly, an iterative strategy that involves adaptive parameter adjustment for re-extracting and re-matching features is presented. Considering the fact that almost all feature-based registration methods rely on feature extraction results, the iterative strategy improve the robustness of feature matching. And all parameters can be automatically and adaptively adjusted in the iterative procedure. Thirdly, a uniform level set segmentation model for optical and SAR images is presented to segment conjugate features, and Voronoi diagram is introduced into Spectral Point Matching (VSPM to further enhance the matching accuracy between two sets of matching points. Experimental results show that the proposed method can effectively and robustly generate sufficient, reliable point pairs and provide accurate registration.

An automatic tuning method of a fuzzy logic controller for nuclear reactors

International Nuclear Information System (INIS)

Ramaswamy, P.; Lee, K.Y.; Edwards, R.M.

1993-01-01

The design and evaluation by simulation of an automatically tuned fuzzy logic controller is presented. Typically, fuzzy logic controllers are designed based on an expert's knowledge of the process. However, this approach has its limitations in the fact that the controller is hard to optimize or tune to get the desired control action. A method to automate the tuning process using a simplified Kalman filter approach is presented for the fuzzy logic controller to track a suitable reference trajectory. Here, for purposes of illustration an optimal controller's response is used as a reference trajectory to determine automatically the rules for the fuzzy logic controller. To demonstrate the robustness of this design approach, a nonlinear six-delayed neutron group plant is controlled using a fuzzy logic controller that utilizes estimated reactor temperatures from a one-delayed neutron group observer. The fuzzy logic controller displayed good stability and performance robustness characteristics for a wide range of operation

Application of Wielandt method in continuous-energy nuclear data sensitivity analysis with RMC code

International Nuclear Information System (INIS)

Qiu Yishu; Wang Kan; She Ding

2015-01-01

The Iterated Fission Probability (IFP) method, an accurate method to estimate adjoint-weighted quantities in the continuous-energy Monte Carlo criticality calculations, has been widely used for calculating kinetic parameters and nuclear data sensitivity coefficients. By using a strategy of waiting, however, this method faces the challenge of high memory usage to store the tallies of original contributions which size is proportional to the number of particle histories in each cycle. Recently, the Wielandt method, applied by Monte Carlo code McCARD to calculate kinetic parameters, estimates adjoint fluxes in a single particle history and thus can save memory usage. In this work, the Wielandt method has been applied in Rector Monte Carlo code RMC for nuclear data sensitivity analysis. The methodology and algorithm of applying Wielandt method in estimation of adjoint-based sensitivity coefficients are discussed. Verification is performed by comparing the sensitivity coefficients calculated by Wielandt method with analytical solutions, those computed by IFP method which is also implemented in RMC code for sensitivity analysis, and those from the multi-group TSUNAMI-3D module in SCALE code package. (author)

Development of 'SKYSHINE-CG' code. A line-beam method code equipped with combinatorial geometry routine

Energy Technology Data Exchange (ETDEWEB)

Nakagawa, Takahiro; Ochiai, Katsuharu [Plant and System Planning Department, Toshiba Corporation, Yokohama, Kanagawa (Japan); Uematsu, Mikio; Hayashida, Yoshihisa [Department of Nuclear Engineering, Toshiba Engineering Corporation, Yokohama, Kanagawa (Japan)

2000-03-01

A boiling water reactor (BWR) plant has a single loop coolant system, in which main steam generated in the reactor core proceeds directly into turbines. Consequently, radioactive {sup 16}N (6.2 MeV photon emitter) contained in the steam contributes to gamma-ray skyshine dose in the vicinity of the BWR plant. The skyshine dose analysis is generally performed with the line-beam method code SKYSHINE, in which calculational geometry consists of a rectangular turbine building and a set of isotropic point sources corresponding to an actual distribution of {sup 16}N sources. For the purpose of upgrading calculational accuracy, the SKYSHINE-CG code has been developed by incorporating the combinatorial geometry (CG) routine into the SKYSHINE code, so that shielding effect of in-building equipment can be properly considered using a three-dimensional model composed of boxes, cylinders, spheres, etc. Skyshine dose rate around a 500 MWe BWR plant was calculated with both SKYSHINE and SKYSHINE-CG codes, and the calculated results were compared with measured data obtained with a NaI(Tl) scintillation detector. The C/E values for SKYSHINE-CG calculation were scattered around 4.0, whereas the ones for SKYSHINE calculation were as large as 6.0. Calculational error was found to be reduced by adopting three-dimensional model based on the combinatorial geometry method. (author)

Some aspects of grading Java code submissions in MOOCs

Directory of Open Access Journals (Sweden)

Sándor Király

2017-07-01

Full Text Available Recently, massive open online courses (MOOCs have been offering a new online approach in the field of distance learning and online education. A typical MOOC course consists of video lectures, reading material and easily accessible tests for students. For a computer programming course, it is important to provide interactive, dynamic, online coding exercises and more complex programming assignments for learners. It is expedient for the students to receive prompt feedback on their coding submissions. Although MOOC automated programme evaluation subsystem is capable of assessing source programme files that are in learning management systems, in MOOC systems there is a grader that is responsible for evaluating students’ assignments with the result that course staff would be required to assess thousands of programmes submitted by the participants of the course without the benefit of an automatic grader. This paper presents a new concept for grading programming submissions of students and improved techniques based on the Java unit testing framework that enables automatic grading of code chunks. Some examples are also given such as the creation of unique exercises by dynamically generating the parameters of the assignment in a MOOC programming course combined with the kind of coding style recognition to teach coding standards.

Computer-assisted Particle-in-Cell code development

International Nuclear Information System (INIS)

Kawata, S.; Boonmee, C.; Teramoto, T.; Drska, L.; Limpouch, J.; Liska, R.; Sinor, M.

1997-12-01

This report presents a new approach for an electromagnetic Particle-in-Cell (PIC) code development by a computer: in general PIC codes have a common structure, and consist of a particle pusher, a field solver, charge and current density collections, and a field interpolation. Because of the common feature, the main part of the PIC code can be mechanically developed on a computer. In this report we use the packages FIDE and GENTRAN of the REDUCE computer algebra system for discretizations of field equations and a particle equation, and for an automatic generation of Fortran codes. The approach proposed is successfully applied to the development of 1.5-dimensional PIC code. By using the generated PIC code the Weibel instability in a plasma is simulated. The obtained growth rate agrees well with the theoretical value. (author)

WKB: an interactive code for solving differential equations using phase integral methods

International Nuclear Information System (INIS)

White, R.B.

1978-01-01

A small code for the analysis of ordinary differential equations interactively through the use of Phase Integral Methods (WKB) has been written for use on the DEC 10. This note is a descriptive manual for those interested in using the code

Development Status of Diffusion Code RAST-K 2.0 at UNIST

Energy Technology Data Exchange (ETDEWEB)

Park, Minyong; Zheng, Youqi; Choe, Jiwon; Zhang, Peng; Lee, Deokjung [UNIST, Ulsan (Korea, Republic of); Lee, Eunki; Shin, Hocheol [KHNP Central Research Institute, Daejeon (Korea, Republic of)

2016-10-15

The non-linear scheme was used based on the 2-group CMFD and a three dimensional multi -group unified nodal method (UNM). To consider the history effects, the main heavy isotopes were tracked by micro-depletion module using CRAM. The simplified 1-D single channel thermal hydraulic solver from nTACER is implemented. The θ method was adopted in the transient calculation. To get detailed pin-wise power and burnup distribution, Pin power reconstruction module was implemented. Also automatic control logic to calculate MTC, FTC, control rod worth was implemented. To perform multicycle analysis, restart and shuffling/rotation module has been implemented. To link between CASMO-4E and RAST-K 2.0, CATORA (CASMO TO RAST-K 2.0) code was developed. Unlike the other diffusion codes, RAST-K 2.0 depletion module uses CRAM and extended depletion chain for fission products. Most lattice codes give cumulative fission yield of Pm-149 without considering Pm-148 and Pm-149 capture reaction which will lead to the increase of Sm-149 number density. This paper reports the status of RAST-K 2.0 code development at UNIST. The new code applies a new kernel based on the two-node UNM with CMFD, and θ method for kinetic calculation. Also, the microdepletion calculation is used to consider the history effects. And other modules and functions also implemented such as pin power reconstruction, branch calculation, restart, multi-cycle, and 1-D single channel T/H solver.

Modeling radiation belt dynamics using a 3-D layer method code

Science.gov (United States)

Wang, C.; Ma, Q.; Tao, X.; Zhang, Y.; Teng, S.; Albert, J. M.; Chan, A. A.; Li, W.; Ni, B.; Lu, Q.; Wang, S.

2017-08-01

A new 3-D diffusion code using a recently published layer method has been developed to analyze radiation belt electron dynamics. The code guarantees the positivity of the solution even when mixed diffusion terms are included. Unlike most of the previous codes, our 3-D code is developed directly in equatorial pitch angle (α0), momentum (p), and L shell coordinates; this eliminates the need to transform back and forth between (α0,p) coordinates and adiabatic invariant coordinates. Using (α0,p,L) is also convenient for direct comparison with satellite data. The new code has been validated by various numerical tests, and we apply the 3-D code to model the rapid electron flux enhancement following the geomagnetic storm on 17 March 2013, which is one of the Geospace Environment Modeling Focus Group challenge events. An event-specific global chorus wave model, an AL-dependent statistical plasmaspheric hiss wave model, and a recently published radial diffusion coefficient formula from Time History of Events and Macroscale Interactions during Substorms (THEMIS) statistics are used. The simulation results show good agreement with satellite observations, in general, supporting the scenario that the rapid enhancement of radiation belt electron flux for this event results from an increased level of the seed population by radial diffusion, with subsequent acceleration by chorus waves. Our results prove that the layer method can be readily used to model global radiation belt dynamics in three dimensions.

A Noise-Assisted Data Analysis Method for Automatic EOG-Based Sleep Stage Classification Using Ensemble Learning.

Science.gov (United States)

Olesen, Alexander Neergaard; Christensen, Julie A E; Sorensen, Helge B D; Jennum, Poul J

2016-08-01

Reducing the number of recording modalities for sleep staging research can benefit both researchers and patients, under the condition that they provide as accurate results as conventional systems. This paper investigates the possibility of exploiting the multisource nature of the electrooculography (EOG) signals by presenting a method for automatic sleep staging using the complete ensemble empirical mode decomposition with adaptive noise algorithm, and a random forest classifier. It achieves a high overall accuracy of 82% and a Cohen's kappa of 0.74 indicating substantial agreement between automatic and manual scoring.

Computer codes and methods for simulating accelerator driven systems

International Nuclear Information System (INIS)

Sartori, E.; Byung Chan Na

2003-01-01

A large set of computer codes and associated data libraries have been developed by nuclear research and industry over the past half century. A large number of them are in the public domain and can be obtained under agreed conditions from different Information Centres. The areas covered comprise: basic nuclear data and models, reactor spectra and cell calculations, static and dynamic reactor analysis, criticality, radiation shielding, dosimetry and material damage, fuel behaviour, safety and hazard analysis, heat conduction and fluid flow in reactor systems, spent fuel and waste management (handling, transportation, and storage), economics of fuel cycles, impact on the environment of nuclear activities etc. These codes and models have been developed mostly for critical systems used for research or power generation and other technological applications. Many of them have not been designed for accelerator driven systems (ADS), but with competent use, they can be used for studying such systems or can form the basis for adapting existing methods to the specific needs of ADS's. The present paper describes the types of methods, codes and associated data available and their role in the applications. It provides Web addresses for facilitating searches for such tools. Some indications are given on the effect of non appropriate or 'blind' use of existing tools to ADS. Reference is made to available experimental data that can be used for validating the methods use. Finally, some international activities linked to the different computational aspects are described briefly. (author)

Benchmarking of epithermal methods in the lattice-physics code EPRI-CELL

International Nuclear Information System (INIS)

Williams, M.L.; Wright, R.Q.; Barhen, J.; Rothenstein, W.; Toney, B.

1982-01-01

The epithermal cross section shielding methods used in the lattice physics code EPRI-CELL (E-C) have been extensively studied to determine its major approximations and to examine the sensitivity of computed results to these approximations. The study has resulted in several improvements in the original methodology. These include: treatment of the external moderator source with intermediate resonance (IR) theory, development of a new Dancoff factor expression to account for clad interactions, development of a new method for treating resonance interference, and application of a generalized least squares method to compute best-estimate values for the Bell factor and group-dependent IR parameters. The modified E-C code with its new ENDF/B-V cross section library is tested for several numerical benchmark problems. Integral parameters computed by EC are compared with those obtained with point-cross section Monte Carlo calculations, and E-C fine group cross sections are benchmarked against point-cross section descrete ordinates calculations. It is found that the code modifications improve agreement between E-C and the more sophisticated methods. E-C shows excellent agreement on the integral parameters and usually agrees within a few percent on fine-group, shielded cross sections

Combining Recurrence Analysis and Automatic Movement Extraction from Video Recordings to Study Behavioral Coupling in Face-to-Face Parent-Child Interactions.

Science.gov (United States)

López Pérez, David; Leonardi, Giuseppe; Niedźwiecka, Alicja; Radkowska, Alicja; Rączaszek-Leonardi, Joanna; Tomalski, Przemysław

2017-01-01

The analysis of parent-child interactions is crucial for the understanding of early human development. Manual coding of interactions is a time-consuming task, which is a limitation in many projects. This becomes especially demanding if a frame-by-frame categorization of movement needs to be achieved. To overcome this, we present a computational approach for studying movement coupling in natural settings, which is a combination of a state-of-the-art automatic tracker, Tracking-Learning-Detection (TLD), and nonlinear time-series analysis, Cross-Recurrence Quantification Analysis (CRQA). We investigated the use of TLD to extract and automatically classify movement of each partner from 21 video recordings of interactions, where 5.5-month-old infants and mothers engaged in free play in laboratory settings. As a proof of concept, we focused on those face-to-face episodes, where the mother animated an object in front of the infant, in order to measure the coordination between the infants' head movement and the mothers' hand movement. We also tested the feasibility of using such movement data to study behavioral coupling between partners with CRQA. We demonstrate that movement can be extracted automatically from standard definition video recordings and used in subsequent CRQA to quantify the coupling between movement of the parent and the infant. Finally, we assess the quality of this coupling using an extension of CRQA called anisotropic CRQA and show asymmetric dynamics between the movement of the parent and the infant. When combined these methods allow automatic coding and classification of behaviors, which results in a more efficient manner of analyzing movements than manual coding.

The Fractal Patterns of Words in a Text: A Method for Automatic Keyword Extraction.

Science.gov (United States)

Najafi, Elham; Darooneh, Amir H

2015-01-01

A text can be considered as a one dimensional array of words. The locations of each word type in this array form a fractal pattern with certain fractal dimension. We observe that important words responsible for conveying the meaning of a text have dimensions considerably different from one, while the fractal dimensions of unimportant words are close to one. We introduce an index quantifying the importance of the words in a given text using their fractal dimensions and then ranking them according to their importance. This index measures the difference between the fractal pattern of a word in the original text relative to a shuffled version. Because the shuffled text is meaningless (i.e., words have no importance), the difference between the original and shuffled text can be used to ascertain degree of fractality. The degree of fractality may be used for automatic keyword detection. Words with the degree of fractality higher than a threshold value are assumed to be the retrieved keywords of the text. We measure the efficiency of our method for keywords extraction, making a comparison between our proposed method and two other well-known methods of automatic keyword extraction.

The Fractal Patterns of Words in a Text: A Method for Automatic Keyword Extraction

Science.gov (United States)

Najafi, Elham; Darooneh, Amir H.

2015-01-01

A text can be considered as a one dimensional array of words. The locations of each word type in this array form a fractal pattern with certain fractal dimension. We observe that important words responsible for conveying the meaning of a text have dimensions considerably different from one, while the fractal dimensions of unimportant words are close to one. We introduce an index quantifying the importance of the words in a given text using their fractal dimensions and then ranking them according to their importance. This index measures the difference between the fractal pattern of a word in the original text relative to a shuffled version. Because the shuffled text is meaningless (i.e., words have no importance), the difference between the original and shuffled text can be used to ascertain degree of fractality. The degree of fractality may be used for automatic keyword detection. Words with the degree of fractality higher than a threshold value are assumed to be the retrieved keywords of the text. We measure the efficiency of our method for keywords extraction, making a comparison between our proposed method and two other well-known methods of automatic keyword extraction. PMID:26091207

REALIZATION OF TRAINING PROGRAMME ON THE BASIS OF LINGUISTIC DATABASE FOR AUTOMATIC TEXTS PROCESSING SYSTEM

Directory of Open Access Journals (Sweden)

M. A. Makarych

2016-01-01

Full Text Available Due to the constant increasing of electronic textual information, modern society needs for the automatic processing of natural language (NL. The main purpose of NL automatic text processing systems is to analyze and create texts and represent their content. The purpose of the paper is the development of linguistic and software bases of an automatic system for processing English publicistic texts. This article discusses the examples of different approaches to the creation of linguistic databases for processing systems. The author gives a detailed description of basic building blocks for a new linguistic processor: lexical-semantic, syntactical and semantic-syntactical. The main advantage of the processor is using special semantic codes in the alphabetical dictionary. The semantic codes have been developed in accordance with a lexical-semantic classification. It helps to precisely define semantic functions of the keywords that are situated in parsing groups and allows the automatic system to avoid typical mistakes. The author also represents the realization of a developed linguistic database in the form of a training computer program.

Hybrid Micro-Depletion method in the DYN3D code

Energy Technology Data Exchange (ETDEWEB)

Bilodid, Yurii [Helmholtz-Zentrum Dresden-Rossendorf e.V., Dresden (Germany). Div. Reactor Safety

2016-07-01

A new method for accounting spectral history effects was developed and implemented in the reactor dynamics code DYN3D. Detailed nuclide content is calculated for each region of the reactor core and used to correct fuel properties. The new method demonstrates excellent results in test cases.

Development of assessment system for tank earthquake-proof design (ASTEP code) installing automatic operation and knowledge database

International Nuclear Information System (INIS)

Maekawa, Akira; Suzuki, Michiaki; Fujii, Yuzo

2004-01-01

In a nuclear power station, seismic-proof design of the various tanks classified as auxiliary installation are required to follow technical guideline for the seismic-proof design of nuclear power station, which is called JEAC4601 for short in below. This guideline uses simple mechanical multi-mass model but a rather complicated evaluation method requires designers to have knowledge and experience and consumes both time and labor. On purpose to resolve those difficulties, Assessment System for Tank Earthquake-Proof Design, which is called ASTEP in short, has been developed and equipped with automated process and knowledge database. For this system, the targeted types of tank are a vertical cylindrical tank that has four supports or a skirt support, a horizontal cylindrical tank that has two saddle supports, and vertical cylindrical tank or water storage tank with a flat bottom. The system integrated all the seismic-proof design evaluation related tools and equipped with step by step menus in order of the flowchart, so enables designers to use them easily. In addition, it has a input aid that enables users to input with ease and a tool that automatically calculates input parameters. So this system reduces seismic-proof design evaluation related work load dramatically and also does not require much knowledge and experience related to this field. Further more, this system organized seismic-proof design related past statement and technical documents as a knowledge database so user could obtain the identical output as of the manual calculation results. Comparing output of ASTEP code and the manual calculation results of a typical tank that requires government approval of its design evaluation document, the error was within less than a percent so validity of the system was confirmed. This system has gained favorable comment during the trial run, and it was beyond our expectation. (author)

Refuelling design and core calculations at NPP Paks: codes and methods

International Nuclear Information System (INIS)

Pos, I.; Nemes, I.; Javor, E.; Korpas, L.; Szecsenyi, Z.; Patai-Szabo, S.

2001-01-01

This article gives a brief review of the computer codes used in the fuel management practice at NPP Paks. The code package consist of the HELIOS neutron and gamma transport code for preparation of few-group cross section library, the CERBER code to determine the optimal core loading patterns and the C-PORCA code for detailed reactor physical analysis of different reactor states. The last two programs have been developed at the NPP Paks. HELIOS gives sturdy basis for our neutron physical calculation, CERBER and C-PORCA programs have been enhanced in great extent for last years. Methods and models have become more detailed and accurate as regards the calculated parameters and space resolution. Introduction of a more advanced data handling algorithm arbitrary move of fuel assemblies can be followed either in the reactor core or storage pool. The new interactive WINDOWS applications allow easier and more reliable use of codes. All these computer code developments made possible to handle and calculate new kind of fuels as profiled Russian and BNFL fuel with burnable poison or to support the reliable reuse of fuel assemblies stored in the storage pool. To extend thermo-hydraulic capability, with KFKI contribution the COBRA code will also be coupled to the system (Authors)

FLP: a field line plotting code for bundle divertor design

International Nuclear Information System (INIS)

Ruchti, C.

1981-01-01

A computer code was developed to aid in the design of bundle divertors. The code can handle discrete toroidal field coils and various divertor coil configurations. All coils must be composed of straight line segments. The code runs on the PDP-10 and displays plots of the configuration, field lines, and field ripple. It automatically chooses the coil currents to connect the separatrix produced by the divertor to the outer edge of the plasma and calculates the required coil cross sections. Several divertor designs are illustrated to show how the code works

ISS Contingency Attitude Control Recovery Method for Loss of Automatic Thruster Control

Science.gov (United States)

Bedrossian, Nazareth; Bhatt, Sagar; Alaniz, Abran; McCants, Edward; Nguyen, Louis; Chamitoff, Greg

2008-01-01

In this paper, the attitude control issues associated with International Space Station (ISS) loss of automatic thruster control capability are discussed and methods for attitude control recovery are presented. This scenario was experienced recently during Shuttle mission STS-117 and ISS Stage 13A in June 2007 when the Russian GN&C computers, which command the ISS thrusters, failed. Without automatic propulsive attitude control, the ISS would not be able to regain attitude control after the Orbiter undocked. The core issues associated with recovering long-term attitude control using CMGs are described as well as the systems engineering analysis to identify recovery options. It is shown that the recovery method can be separated into a procedure for rate damping to a safe harbor gravity gradient stable orientation and a capability to maneuver the vehicle to the necessary initial conditions for long term attitude hold. A manual control option using Soyuz and Progress vehicle thrusters is investigated for rate damping and maneuvers. The issues with implementing such an option are presented and the key issue of closed-loop stability is addressed. A new non-propulsive alternative to thruster control, Zero Propellant Maneuver (ZPM) attitude control method is introduced and its rate damping and maneuver performance evaluated. It is shown that ZPM can meet the tight attitude and rate error tolerances needed for long term attitude control. A combination of manual thruster rate damping to a safe harbor attitude followed by a ZPM to Stage long term attitude control orientation was selected by the Anomaly Resolution Team as the alternate attitude control method for such a contingency.

Most probable dimension value and most flat interval methods for automatic estimation of dimension from time series

International Nuclear Information System (INIS)

Corana, A.; Bortolan, G.; Casaleggio, A.

2004-01-01

We present and compare two automatic methods for dimension estimation from time series. Both methods, based on conceptually different approaches, work on the derivative of the bi-logarithmic plot of the correlation integral versus the correlation length (log-log plot). The first method searches for the most probable dimension values (MPDV) and associates to each of them a possible scaling region. The second one searches for the most flat intervals (MFI) in the derivative of the log-log plot. The automatic procedures include the evaluation of the candidate scaling regions using two reliability indices. The data set used to test the methods consists of time series from known model attractors with and without the addition of noise, structured time series, and electrocardiographic signals from the MIT-BIH ECG database. Statistical analysis of results was carried out by means of paired t-test, and no statistically significant differences were found in the large majority of the trials. Consistent results are also obtained dealing with 'difficult' time series. In general for a more robust and reliable estimate, the use of both methods may represent a good solution when time series from complex systems are analyzed. Although we present results for the correlation dimension only, the procedures can also be used for the automatic estimation of generalized q-order dimensions and pointwise dimension. We think that the proposed methods, eliminating the need of operator intervention, allow a faster and more objective analysis, thus improving the usefulness of dimension analysis for the characterization of time series obtained from complex dynamical systems

Automatic Cobb Angle Determination From Radiographic Images

NARCIS (Netherlands)

Sardjono, Tri Arief; Wilkinson, Michael H. F.; Veldhuizen, Albert G.; van Ooijen, Peter M. A.; Purnama, Ketut E.; Verkerke, Gijsbertus J.

2013-01-01

Study Design. Automatic measurement of Cobb angle in patients with scoliosis. Objective. To test the accuracy of an automatic Cobb angle determination method from frontal radiographical images. Summary of Background Data. Thirty-six frontal radiographical images of patients with scoliosis. Methods.

Method of automatic image registration of three-dimensional range of archaeological restoration

International Nuclear Information System (INIS)

Garcia, O.; Perez, M.; Morales, N.

2012-01-01

We propose an automatic registration system for reconstruction of various positions of a large object based on a static structured light pattern. The system combines the technology of stereo vision, structured light pattern, the positioning system of the vision sensor and an algorithm that simplifies the process of finding correspondence for the modeling of large objects. A new structured light pattern based on Kautz sequence is proposed, using this pattern as static implement a proposed new registration method. (Author)

Automatic Knowledge Extraction and Knowledge Structuring for a National Term Bank

DEFF Research Database (Denmark)

Lassen, Tine; Madsen, Bodil Nistrup; Erdman Thomsen, Hanne

2011-01-01

This paper gives an introduction to the plans and ongoing work in a project, the aim of which is to develop methods for automatic knowledge extraction and automatic construction and updating of ontologies. The project also aims at developing methods for automatic merging of terminological data fr...... various existing sources, as well as methods for target group oriented knowledge dissemination. In this paper, we mainly focus on the plans for automatic knowledge extraction and knowledge structuring that will result in ontologies for a national term bank.......This paper gives an introduction to the plans and ongoing work in a project, the aim of which is to develop methods for automatic knowledge extraction and automatic construction and updating of ontologies. The project also aims at developing methods for automatic merging of terminological data from...

flowAI: automatic and interactive anomaly discerning tools for flow cytometry data.

Science.gov (United States)

Monaco, Gianni; Chen, Hao; Poidinger, Michael; Chen, Jinmiao; de Magalhães, João Pedro; Larbi, Anis

2016-08-15

Flow cytometry (FCM) is widely used in both clinical and basic research to characterize cell phenotypes and functions. The latest FCM instruments analyze up to 20 markers of individual cells, producing high-dimensional data. This requires the use of the latest clustering and dimensionality reduction techniques to automatically segregate cell sub-populations in an unbiased manner. However, automated analyses may lead to false discoveries due to inter-sample differences in quality and properties. We present an R package, flowAI, containing two methods to clean FCM files from unwanted events: (i) an automatic method that adopts algorithms for the detection of anomalies and (ii) an interactive method with a graphical user interface implemented into an R shiny application. The general approach behind the two methods consists of three key steps to check and remove suspected anomalies that derive from (i) abrupt changes in the flow rate, (ii) instability of signal acquisition and (iii) outliers in the lower limit and margin events in the upper limit of the dynamic range. For each file analyzed our software generates a summary of the quality assessment from the aforementioned steps. The software presented is an intuitive solution seeking to improve the results not only of manual but also and in particular of automatic analysis on FCM data. R source code available through Bioconductor: http://bioconductor.org/packages/flowAI/ CONTACTS: mongianni1@gmail.com or Anis_Larbi@immunol.a-star.edu.sg Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

A perturbation-based susbtep method for coupled depletion Monte-Carlo codes

International Nuclear Information System (INIS)

Kotlyar, Dan; Aufiero, Manuele; Shwageraus, Eugene; Fratoni, Massimiliano

2017-01-01

Highlights: • The GPT method allows to calculate the sensitivity coefficients to any perturbation. • Full Jacobian of sensitivities, cross sections (XS) to concentrations, may be obtained. • The time dependent XS is obtained by combining the GPT and substep methods. • The proposed GPT substep method considerably reduces the time discretization error. • No additional MC transport solutions are required within the time step. - Abstract: Coupled Monte Carlo (MC) methods are becoming widely used in reactor physics analysis and design. Many research groups therefore, developed their own coupled MC depletion codes. Typically, in such coupled code systems, neutron fluxes and cross sections are provided to the depletion module by solving a static neutron transport problem. These fluxes and cross sections are representative only of a specific time-point. In reality however, both quantities would change through the depletion time interval. Recently, Generalized Perturbation Theory (GPT) equivalent method that relies on collision history approach was implemented in Serpent MC code. This method was used here to calculate the sensitivity of each nuclide and reaction cross section due to the change in concentration of every isotope in the system. The coupling method proposed in this study also uses the substep approach, which incorporates these sensitivity coefficients to account for temporal changes in cross sections. As a result, a notable improvement in time dependent cross section behavior was obtained. The method was implemented in a wrapper script that couples Serpent with an external depletion solver. The performance of this method was compared with other existing methods. The results indicate that the proposed method requires substantially less MC transport solutions to achieve the same accuracy.

New computational methods used in the lattice code DRAGON

International Nuclear Information System (INIS)

Marleau, G.; Hebert, A.; Roy, R.

1992-01-01

The lattice code DRAGON is used to perform transport calculations inside cells and assemblies for multidimensional geometry using the collision probability method, including the interface current and J ± techniques. Typical geometries that can be treated using this code include CANDU 2-dimensional clusters, CANDU 3-dimensional assemblies, pressurized water reactor (PWR) rectangular and hexagonal assemblies. It contains a self-shielding module for the treatment of microscopic cross section libraries and a depletion module for burnup calculations. DRAGON was written in a modular form in such a way as to accept easily new collision probability options and make them readily available to all the modules that require collision probability matrices like the self-shielding module, the flux solution module and the homogenization module. In this paper the authors present an overview of DRAGON and discuss some of the methods that were implemented in DRAGON in order to improve on its performance

Use Them ... or Lose Them? The Case for and against Using QR Codes

Science.gov (United States)

Cunningham, Chuck; Dull, Cassie

2011-01-01

A quick-response (QR) code is a two-dimensional, black-and-white square barcode and links directly to a URL of one's choice. When the code is scanned with a smartphone, it will automatically redirect the user to the designated URL. QR codes are popping up everywhere--billboards, magazines, posters, shop windows, TVs, computer screens, and more.…

Average Likelihood Methods of Classification of Code Division Multiple Access (CDMA)

Science.gov (United States)

2016-05-01

subject to code matrices that follows the structure given by (113). [⃗ yR y⃗I ] = √ Es 2L [ GR1 −GI1 GI2 GR2 ] [ QR −QI QI QR ] [⃗ bR b⃗I ] + [⃗ nR n⃗I... QR ] [⃗ b+ b⃗− ] + [⃗ n+ n⃗− ] (115) The average likelihood for type 4 CDMA (116) is a special case of type 1 CDMA with twice the code length and...AVERAGE LIKELIHOOD METHODS OF CLASSIFICATION OF CODE DIVISION MULTIPLE ACCESS (CDMA) MAY 2016 FINAL TECHNICAL REPORT APPROVED FOR PUBLIC RELEASE

Automatic Enhancement of the Reference Set for Multi-Criteria Sorting in The Frame of Theseus Method

Directory of Open Access Journals (Sweden)

Fernandez Eduardo

2014-05-01

Full Text Available Some recent works have established the importance of handling abundant reference information in multi-criteria sorting problems. More valid information allows a better characterization of the agent’s assignment policy, which can lead to an improved decision support. However, sometimes information for enhancing the reference set may be not available, or may be too expensive. This paper explores an automatic mode of enhancing the reference set in the framework of the THESEUS multi-criteria sorting method. Some performance measures are defined in order to test results of the enhancement. Several theoretical arguments and practical experiments are provided here, supporting a basic advantage of the automatic enhancement: a reduction of the vagueness measure that improves the THESEUS accuracy, without additional efforts from the decision agent. The experiments suggest that the errors coming from inadequate automatic assignments can be kept at a manageable level.

Development of a kinetics analysis code for fuel solution combined with thermal-hydraulics analysis code PHOENICS and analysis of natural-cooling characteristic test of TRACY. Contract research

Energy Technology Data Exchange (ETDEWEB)

Watanabe, Shouichi; Yamane, Yuichi; Miyoshi, Yoshinori [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment

2003-03-01

Since exact information is not always acquired in the criticality accident of fuel solution, parametric survey calculations are required for grasping behaviors of the thermal-hydraulics. On the other hand, the practical methods of the calculation with can reduce the computation time with allowable accuracy will be also required, since the conventional method takes a long calculation time. In order to fulfill the requirement, a two-dimensional (R-Z) nuclear-kinetics analysis code considering thermal-hydraulic based on the multi-region kinetic equations with one-group neutron energy was created by incorporating with the thermal-hydraulics analysis code PHOENICS for all-purpose use the computation time of the code was shortened by separating time mesh intervals of the nuclear- and heat-calculations from that of the hydraulics calculation, and by regulating automatically the time mesh intervals in proportion to power change rate. A series of analysis were performed for the natural-cooling characteristic test using TRACY in which the power changed slowly for 5 hours after the transient power resulting from the reactivity insertion of a 0.5 dollar. It was found that the code system was able to calculate within the limit of practical time, and acquired the prospect of reproducing the experimental values considerably for the power and temperature change. (author)

CREPT-MCNP code for efficiency calibration of HPGe detectors with the representative point method.

Science.gov (United States)

Saegusa, Jun

2008-01-01

The representative point method for the efficiency calibration of volume samples has been previously proposed. For smoothly implementing the method, a calculation code named CREPT-MCNP has been developed. The code estimates the position of a representative point which is intrinsic to each shape of volume sample. The self-absorption correction factors are also given to make correction on the efficiencies measured at the representative point with a standard point source. Features of the CREPT-MCNP code are presented.

Automatic analysis of gamma spectra using a desk computer

International Nuclear Information System (INIS)

Rocca, H.C.

1976-10-01

A code for the analysis of gamma spectra obtained with a Ge(Li) detector was developed for use with a desk computer (Hewlett-Packard Model 9810 A). The process is performed in a totally automatic way, data are conveniently smoothed and the background is generated by a convolutive equation. A calibration of the equipment with well-known standard sources gives the necessary data for adjusting a third degree equation by minimun squares, relating the energy with the peak position. Criteria are given for determining if certain groups of values constitute or not a peak or if it is a double line. All the peaks are adjusted to a gaussian curve and if necessary decomposed in their components. Data entry is by punched tape, ASCII Code. An alf-numeric printer provides (a) the position of the peak and its energy, (b) its resolution if it is larger than expected, (c) the area of the peak with its statistic error determined by the method of Wasson. As option, the complete spectra with the determined background can be plotted. (author) [es

Automatic numerical integration methods for Feynman integrals through 3-loop

International Nuclear Information System (INIS)

De Doncker, E; Olagbemi, O; Yuasa, F; Ishikawa, T; Kato, K

2015-01-01

We give numerical integration results for Feynman loop diagrams through 3-loop such as those covered by Laporta [1]. The methods are based on automatic adaptive integration, using iterated integration and extrapolation with programs from the QUADPACK package, or multivariate techniques from the ParInt package. The Dqags algorithm from QuadPack accommodates boundary singularities of fairly general types. PARINT is a package for multivariate integration layered over MPI (Message Passing Interface), which runs on clusters and incorporates advanced parallel/distributed techniques such as load balancing among processes that may be distributed over a network of nodes. Results are included for 3-loop self-energy diagrams without IR (infra-red) or UV (ultra-violet) singularities. A procedure based on iterated integration and extrapolation yields a novel method of numerical regularization for integrals with UV terms, and is applied to a set of 2-loop self-energy diagrams with UV singularities. (paper)

Automatic differentiation algorithms in model analysis

NARCIS (Netherlands)

Huiskes, M.J.

2002-01-01

Title: Automatic differentiation algorithms in model analysis
Author: M.J. Huiskes
Date: 19 March, 2002

In this thesis automatic differentiation algorithms and derivative-based methods

Automatic differentiation in geophysical inverse problems

Science.gov (United States)

Sambridge, M.; Rickwood, P.; Rawlinson, N.; Sommacal, S.

2007-07-01

Automatic differentiation (AD) is the technique whereby output variables of a computer code evaluating any complicated function (e.g. the solution to a differential equation) can be differentiated with respect to the input variables. Often AD tools take the form of source to source translators and produce computer code without the need for deriving and hand coding of explicit mathematical formulae by the user. The power of AD lies in the fact that it combines the generality of finite difference techniques and the accuracy and efficiency of analytical derivatives, while at the same time eliminating `human' coding errors. It also provides the possibility of accurate, efficient derivative calculation from complex `forward' codes where no analytical derivatives are possible and finite difference techniques are too cumbersome. AD is already having a major impact in areas such as optimization, meteorology and oceanography. Similarly it has considerable potential for use in non-linear inverse problems in geophysics where linearization is desirable, or for sensitivity analysis of large numerical simulation codes, for example, wave propagation and geodynamic modelling. At present, however, AD tools appear to be little used in the geosciences. Here we report on experiments using a state of the art AD tool to perform source to source code translation in a range of geoscience problems. These include calculating derivatives for Gibbs free energy minimization, seismic receiver function inversion, and seismic ray tracing. Issues of accuracy and efficiency are discussed.

Automatic temperature control method of shipping can

International Nuclear Information System (INIS)

Nishikawa, Kaoru.

1992-01-01

The present invention provides a method of rapidly and accurately controlling the temperature of a shipping can, which is used upon shipping inspection for a nuclear fuel assembly. That is, a measured temperature value of the shipping can is converted to a gas pressure setting value in a jacket of the shipping can by conducting a predetermined logic calculation by using a fuzzy logic. A gas pressure control section compares the pressure setting value of a fuzzy estimation section and the measured value of the gas pressure in the jacket of the shipping can, and conducts air supply or exhaustion of the jacket gas so as to adjust the measured value with the setting value. These fuzzy estimation section and gas pressure control section control the gas pressure in the jacket of the shipping can to control the water level in the jacket. As a result, the temperature of the shipping can is controlled. With such procedures, since the water level in the jacket can be controlled directly and finely, temperature of the shipping can is automatically controlled rapidly and accurately compared with a conventional case. (I.S.)

Subband Coding Methods for Seismic Data Compression

Science.gov (United States)

Kiely, A.; Pollara, F.

1995-01-01

This paper presents a study of seismic data compression techniques and a compression algorithm based on subband coding. The compression technique described could be used as a progressive transmission system, where successive refinements of the data can be requested by the user. This allows seismologists to first examine a coarse version of waveforms with minimal usage of the channel and then decide where refinements are required. Rate-distortion performance results are presented and comparisons are made with two block transform methods.

A method for the automatic separation of the images of galaxies and stars from measurements made with the COSMOS machine

International Nuclear Information System (INIS)

MacGillivray, H.T.; Martin, R.; Pratt, N.M.; Reddish, V.C.; Seddon, H.; Alexander, L.W.G.; Walker, G.S.; Williams, P.R.

1976-01-01

A method has been developed which allows the computer to distinguish automatically between the images of galaxies and those of stars from measurements made with the COSMOS automatic plate-measuring machine at the Royal Observatory, Edinburgh. Results have indicated that a 90 to 95 per cent separation between galaxies and stars is possible. (author)

A method of applying two-pump system in automatic transmissions for energy conservation

Directory of Open Access Journals (Sweden)

Peng Dong

2015-06-01

Full Text Available In order to improve the hydraulic efficiency, modern automatic transmissions tend to apply electric oil pump in their hydraulic system. The electric oil pump can support the mechanical oil pump for cooling, lubrication, and maintaining the line pressure at low engine speeds. In addition, the start–stop function can be realized by means of the electric oil pump; thus, the fuel consumption can be further reduced. This article proposes a method of applying two-pump system (one electric oil pump and one mechanical oil pump in automatic transmissions based on the forward driving simulation. A mathematical model for calculating the transmission power loss is developed. The power loss transfers to heat which requires oil flow for cooling and lubrication. A leakage model is developed to calculate the leakage of the hydraulic system. In order to satisfy the flow requirement, a flow-based control strategy for the electric oil pump is developed. Simulation results of different driving cycles show that there is a best combination of the size of electric oil pump and the size of mechanical oil pump with respect to the optimal energy conservation. Besides, the two-pump system can also satisfy the requirement of the start–stop function. This research is extremely valuable for the forward design of a two-pump system in automatic transmissions with respect to energy conservation and start–stop function.

Systems and methods for automatically identifying and linking names in digital resources

Science.gov (United States)

Parker, Charles T.; Lyons, Catherine M.; Roston, Gerald P.; Garrity, George M.

2017-06-06

The present invention provides systems and methods for automatically identifying name-like-strings in digital resources, matching these name-like-string against a set of names held in an expertly curated database, and for those name-like-strings found in said database, enhancing the content by associating additional matter with the name, wherein said matter includes information about the names that is held within said database and pointers to other digital resources which include the same name and it synonyms.

Automatic modeling for the monte carlo transport TRIPOLI code

International Nuclear Information System (INIS)

Zhang Junjun; Zeng Qin; Wu Yican; Wang Guozhong; FDS Team

2010-01-01

TRIPOLI, developed by CEA, France, is Monte Carlo particle transport simulation code. It has been widely applied to nuclear physics, shielding design, evaluation of nuclear safety. However, it is time-consuming and error-prone to manually describe the TRIPOLI input file. This paper implemented bi-directional conversion between CAD model and TRIPOLI model. Its feasibility and efficiency have been demonstrated by several benchmarking examples. (authors)

Building Automatic Grading Tools for Basic of Programming Lab in an Academic Institution

Science.gov (United States)

Harimurti, Rina; Iwan Nurhidayat, Andi; Asmunin

2018-04-01

The skills of computer programming is a core competency that must be mastered by students majoring in computer sciences. The best way to improve this skill is through the practice of writing many programs to solve various problems from simple to complex. It takes hard work and a long time to check and evaluate the results of student labs one by one, especially if the number of students a lot. Based on these constrain, web proposes Automatic Grading Tools (AGT), the application that can evaluate and deeply check the source code in C, C++. The application architecture consists of students, web-based applications, compilers, and operating systems. Automatic Grading Tools (AGT) is implemented MVC Architecture and using open source software, such as laravel framework version 5.4, PostgreSQL 9.6, Bootstrap 3.3.7, and jquery library. Automatic Grading Tools has also been tested for real problems by submitting source code in C/C++ language and then compiling. The test results show that the AGT application has been running well.

Unequal Error Protected JPEG 2000 Broadcast Scheme with Progressive Fountain Codes

OpenAIRE

Chen, Zhao; Xu, Mai; Yin, Luiguo; Lu, Jianhua

2012-01-01

This paper proposes a novel scheme, based on progressive fountain codes, for broadcasting JPEG 2000 multimedia. In such a broadcast scheme, progressive resolution levels of images/video have been unequally protected when transmitted using the proposed progressive fountain codes. With progressive fountain codes applied in the broadcast scheme, the resolutions of images (JPEG 2000) or videos (MJPEG 2000) received by different users can be automatically adaptive to their channel qualities, i.e. ...

Structural dynamics in LMFBR containment analysis: a brief survey of computational methods and codes

International Nuclear Information System (INIS)

Chang, Y.W.; Gvildys, J.

1977-01-01

In recent years, the use of computer codes to study the response of primary containment of large, liquid-metal fast breeder reactors (LMFBR) under postulated accident conditions has been adopted by most fast reactor projects. Since the first introduction of REXCO-H containment code in 1969, a number of containment codes have evolved and been reported in the literature. The paper briefly summarizes the various numerical methods commonly used in containment analysis in computer programs. They are compared on the basis of truncation errors resulting in the numerical approximation, the method of integration, the resolution of the computed results, and the ease of programming in computer codes. The aim of the paper is to provide enough information to an analyst so that he can suitably define his choice of method, and hence his choice of programs

APOLLO-2: An advanced transport code for LWRs

International Nuclear Information System (INIS)

Mathonniere, G.

1995-01-01

APOLLO-2 is a fully modular code in which each module corresponds to a specific task: access to the cross-sections libraries, creation of isotopes medium or mixtures, geometry definition, self-shielding calculations, computation of multigroup collision probabilities, flux solver, depletion calculations, transport-transport or transport-diffusion equivalence process, SN calculations, etc... Modules communicate exclusively by ''objects'' containing structured data, these objects are identified and handled by user's given names. Among the major improvements offered by APOLLO-2 the modelization of the self-shielding: it is possible now to deal with a great precision, checked versus Montecarlo calculations, a fuel rod divided into several concentric rings. So the total production of Plutonium is quite better estimated than before and its radial distribution may be predicted also with a good accuracy. Thanks to the versatility of the code some reference calculations and routine ones may be compared easily because only one parameter is changed; for example the self-shielding approximations are modified, the libraries or the flux solver being exactly the same. Other interesting features have been introduced in APOLLO-2: the new isotopes JEF.2 are available in 99 and 172 energy groups libraries, the surface leakage model improves the calculation of the control rod efficiency, the flux-current method allows faster calculations, the possibility of an automatic convergence checking during the depletion calculations coupled with fully automatic corrections, heterogeneous diffusion coefficients used for voiding analysis. 17 refs, 1 tab

[An automatic peak detection method for LIBS spectrum based on continuous wavelet transform].

Science.gov (United States)

Chen, Peng-Fei; Tian, Di; Qiao, Shu-Jun; Yang, Guang

2014-07-01

Spectrum peak detection in the laser-induced breakdown spectroscopy (LIBS) is an essential step, but the presence of background and noise seriously disturb the accuracy of peak position. The present paper proposed a method applied to automatic peak detection for LIBS spectrum in order to enhance the ability of overlapping peaks searching and adaptivity. We introduced the ridge peak detection method based on continuous wavelet transform to LIBS, and discussed the choice of the mother wavelet and optimized the scale factor and the shift factor. This method also improved the ridge peak detection method with a correcting ridge method. The experimental results show that compared with other peak detection methods (the direct comparison method, derivative method and ridge peak search method), our method had a significant advantage on the ability to distinguish overlapping peaks and the precision of peak detection, and could be be applied to data processing in LIBS.

A multiparametric automatic method to monitor long-term reproducibility in digital mammography: results from a regional screening programme.

Science.gov (United States)

Gennaro, G; Ballaminut, A; Contento, G

2017-09-01

This study aims to illustrate a multiparametric automatic method for monitoring long-term reproducibility of digital mammography systems, and its application on a large scale. Twenty-five digital mammography systems employed within a regional screening programme were controlled weekly using the same type of phantom, whose images were analysed by an automatic software tool. To assess system reproducibility levels, 15 image quality indices (IQIs) were extracted and compared with the corresponding indices previously determined by a baseline procedure. The coefficients of variation (COVs) of the IQIs were used to assess the overall variability. A total of 2553 phantom images were collected from the 25 digital mammography systems from March 2013 to December 2014. Most of the systems showed excellent image quality reproducibility over the surveillance interval, with mean variability below 5%. Variability of each IQI was 5%, with the exception of one index associated with the smallest phantom objects (0.25 mm), which was below 10%. The method applied for reproducibility tests-multi-detail phantoms, cloud automatic software tool to measure multiple image quality indices and statistical process control-was proven to be effective and applicable on a large scale and to any type of digital mammography system. • Reproducibility of mammography image quality should be monitored by appropriate quality controls. • Use of automatic software tools allows image quality evaluation by multiple indices. • System reproducibility can be assessed comparing current index value with baseline data. • Overall system reproducibility of modern digital mammography systems is excellent. • The method proposed and applied is cost-effective and easily scalable.

Semi-Automatic Rename Refactoring for JavaScript

DEFF Research Database (Denmark)

Feldthaus, Asger; Møller, Anders

2013-01-01

and interaction with the programmer. With this pragmatic approach, we can provide scalable and effective refactoring support for real-world code, including libraries and incomplete applications. Through a series of experiments that estimate how much manual effort our technique demands from the programmer, we show......Modern IDEs support automated refactoring for many programming languages, but support for JavaScript is still primitive. To perform renaming, which is one of the fundamental refactorings, there is often no practical alternative to simple syntactic search-and-replace. Although more sophisticated...... alternatives have been developed, they are limited by whole-program assumptions and poor scalability. We propose a technique for semi-automatic refactoring for JavaScript, with a focus on renaming. Unlike traditional refactoring algorithms, semi-automatic refactoring works by a combination of static analysis...

A study and implementation of algorithm for automatic ECT result comparison

International Nuclear Information System (INIS)

Jang, You Hyun; Nam, Min Woo; Kim, In Chul; Joo, Kyung Mun; Kim, Jong Seog

2012-01-01

Automatic ECT Result Comparison Algorithm was developed and implemented with computer language to remove the human error in manual comparison with many data. The structures of two ECT Program (Eddy net and ECT IDS) that have unique file structure were analyzed to open file and upload data in PC memory. Comparison algorithm was defined graphically for easy PC programming language conversion. Automatic Result Program was programmed with C language that is suitable for future code management and has object oriented programming structure and fast development potential. Automatic Result Program has MS Excel file exporting function that is useful to use external S/W for additional analysis and intuitive result visualization function with color mapping in user friendly fashion that helps analyze efficiently

A study and implementation of algorithm for automatic ECT result comparison

Energy Technology Data Exchange (ETDEWEB)

Jang, You Hyun; Nam, Min Woo; Kim, In Chul; Joo, Kyung Mun; Kim, Jong Seog [Central Research Institute, Daejeon (Korea, Republic of)

2012-10-15

Automatic ECT Result Comparison Algorithm was developed and implemented with computer language to remove the human error in manual comparison with many data. The structures of two ECT Program (Eddy net and ECT IDS) that have unique file structure were analyzed to open file and upload data in PC memory. Comparison algorithm was defined graphically for easy PC programming language conversion. Automatic Result Program was programmed with C language that is suitable for future code management and has object oriented programming structure and fast development potential. Automatic Result Program has MS Excel file exporting function that is useful to use external S/W for additional analysis and intuitive result visualization function with color mapping in user friendly fashion that helps analyze efficiently.

A multi coding technique to reduce transition activity in VLSI circuits

International Nuclear Information System (INIS)

Vithyalakshmi, N.; Rajaram, M.

2014-01-01

Advances in VLSI technology have enabled the implementation of complex digital circuits in a single chip, reducing system size and power consumption. In deep submicron low power CMOS VLSI design, the main cause of energy dissipation is charging and discharging of internal node capacitances due to transition activity. Transition activity is one of the major factors that also affect the dynamic power dissipation. This paper proposes power reduction analyzed through algorithm and logic circuit levels. In algorithm level the key aspect of reducing power dissipation is by minimizing transition activity and is achieved by introducing a data coding technique. So a novel multi coding technique is introduced to improve the efficiency of transition activity up to 52.3% on the bus lines, which will automatically reduce the dynamic power dissipation. In addition, 1 bit full adders are introduced in the Hamming distance estimator block, which reduces the device count. This coding method is implemented using Verilog HDL. The overall performance is analyzed by using Modelsim and Xilinx Tools. In total 38.2% power saving capability is achieved compared to other existing methods. (semiconductor technology)

Contrast-based fully automatic segmentation of white matter hyperintensities: method and validation.

Directory of Open Access Journals (Sweden)

Thomas Samaille

Full Text Available White matter hyperintensities (WMH on T2 or FLAIR sequences have been commonly observed on MR images of elderly people. They have been associated with various disorders and have been shown to be a strong risk factor for stroke and dementia. WMH studies usually required visual evaluation of WMH load or time-consuming manual delineation. This paper introduced WHASA (White matter Hyperintensities Automated Segmentation Algorithm, a new method for automatically segmenting WMH from FLAIR and T1 images in multicentre studies. Contrary to previous approaches that were based on intensities, this method relied on contrast: non linear diffusion filtering alternated with watershed segmentation to obtain piecewise constant images with increased contrast between WMH and surroundings tissues. WMH were then selected based on subject dependant automatically computed threshold and anatomical information. WHASA was evaluated on 67 patients from two studies, acquired on six different MRI scanners and displaying a wide range of lesion load. Accuracy of the segmentation was assessed through volume and spatial agreement measures with respect to manual segmentation; an intraclass correlation coefficient (ICC of 0.96 and a mean similarity index (SI of 0.72 were obtained. WHASA was compared to four other approaches: Freesurfer and a thresholding approach as unsupervised methods; k-nearest neighbours (kNN and support vector machines (SVM as supervised ones. For these latter, influence of the training set was also investigated. WHASA clearly outperformed both unsupervised methods, while performing at least as good as supervised approaches (ICC range: 0.87-0.91 for kNN; 0.89-0.94 for SVM. Mean SI: 0.63-0.71 for kNN, 0.67-0.72 for SVM, and did not need any training set.

Five-way smoking status classification using text hot-spot identification and error-correcting output codes.

Science.gov (United States)

Cohen, Aaron M

2008-01-01

We participated in the i2b2 smoking status classification challenge task. The purpose of this task was to evaluate the ability of systems to automatically identify patient smoking status from discharge summaries. Our submission included several techniques that we compared and studied, including hot-spot identification, zero-vector filtering, inverse class frequency weighting, error-correcting output codes, and post-processing rules. We evaluated our approaches using the same methods as the i2b2 task organizers, using micro- and macro-averaged F1 as the primary performance metric. Our best performing system achieved a micro-F1 of 0.9000 on the test collection, equivalent to the best performing system submitted to the i2b2 challenge. Hot-spot identification, zero-vector filtering, classifier weighting, and error correcting output coding contributed additively to increased performance, with hot-spot identification having by far the largest positive effect. High performance on automatic identification of patient smoking status from discharge summaries is achievable with the efficient and straightforward machine learning techniques studied here.

Code Generation from Pragmatics Annotated Coloured Petri Nets

DEFF Research Database (Denmark)

Simonsen, Kent Inge

limited work has been done on transforming CPN model to protocol implementations. The goal of the thesis is to be able to automatically generate high-quality implementations of communication protocols based on CPN models. In this thesis, we develop a methodology for generating implementations of protocols...... third party libraries and the code should be easily usable by third party code. Finally, the code should be readable by developers with expertise on the considered platforms. In this thesis, we show that our code generation approach is able to generate code for a wide range of platforms without altering...... such as games and rich web applications. Finally, we conclude the evaluation of the criteria of our approach by using the WebSocket PA-CPN model to show that we are able to verify fairly large protocols....

Development of automatic extraction method of left ventricular contours on long axis view MR cine images

International Nuclear Information System (INIS)

Utsunomiya, Shinichi; Iijima, Naoto; Yamasaki, Kazunari; Fujita, Akinori

1995-01-01

In the MRI cardiac function analysis, left ventricular volume curves and diagnosis parameters are obtained by extracting the left ventricular cavities as regions of interest (ROI) from long axis view MR cine images. The ROI extractions had to be done by manual operations, because automatization of the extraction is difficult. A long axis view left ventricular contour consists of a cardiac wall part and an aortic valve part. The above mentioned difficulty is due to the decline of contrast on the cardiac wall part, and the disappearance of edge on the aortic valve part. In this paper, we report a new automatic extraction method for long axis view MR cine images, which needs only 3 manually indicated points on the 1st image to extract all the contours from the total sequence of images. At first, candidate points of a contour are detected by edge detection. Then, selecting the best matched combination of candidate points by Dynamic Programming, the cardiac wall part is automatically extracted. The aortic valve part is manually extracted for the 1st image by indicating both the end points, and is automatically extracted for the rest of the images, by utilizing the aortic valve motion characteristics throughout a cardiac cycle. (author)

Development of a two-dimensional simulation code (koad) including atomic processes for beam direct energy conversion

International Nuclear Information System (INIS)

Yamamoto, Y.; Yoshikawa, K.; Hattori, Y.

1987-01-01

A two-dimensional simulation code for the beam direct energy conversion called KVAD (Kyoto University Advanced DART) including various loss mechanisms has been developed, and shown excellent agreement with the authors' experiments using the He + beams. The beam direct energy converter (BDC) is the device to recover the kinetic energy of unneutralized ions in the neutral beam injection (NBI) system directly into electricity. The BDC is very important and essential not only to the improvements of NBI system efficiency, but also to the relaxation of high heat flux problems on the beam dump with increase of injection energies. So far no simulation code could have successfully predicted BDC experimental results. The KUAD code applies, an optimized algorithm for vector processing, the finite element method (FEM) for potential calculation, and a semi-automatic method for spatial segmentations. Since particle trajectories in the KVAD code are analytically solved, very high speed tracings of the particle could be achieved by introducing an adjacent element matrix to identify the neighboring triangle elements and electrodes. Ion space charges are also analytically calculated by the Cloud in Cell (CIC) method, as well as electron space charges. Power losses due to atomic processes can be also evaluated in the KUAD code

CFD code verification and the method of manufactured solutions

International Nuclear Information System (INIS)

Pelletier, D.; Roache, P.J.

2002-01-01

This paper presents the Method of Manufactured Solutions (MMS) for CFD code verification. The MMS provides benchmark solutions for direct evaluation of the solution error. The best benchmarks are exact analytical solutions with sufficiently complex solution structure to ensure that all terms of the differential equations are exercised in the simulation. The MMS provides a straight forward and general procedure for generating such solutions. When used with systematic grid refinement studies, which are remarkably sensitive, the MMS provides strong code verification with a theorem-like quality. The MMS is first presented on simple 1-D examples. Manufactured solutions for more complex problems are then presented with sample results from grid convergence studies. (author)

Code query by example

Science.gov (United States)

Vaucouleur, Sebastien

2011-02-01

We introduce code query by example for customisation of evolvable software products in general and of enterprise resource planning systems (ERPs) in particular. The concept is based on an initial empirical study on practices around ERP systems. We motivate our design choices based on those empirical results, and we show how the proposed solution helps with respect to the infamous upgrade problem: the conflict between the need for customisation and the need for upgrade of ERP systems. We further show how code query by example can be used as a form of lightweight static analysis, to detect automatically potential defects in large software products. Code query by example as a form of lightweight static analysis is particularly interesting in the context of ERP systems: it is often the case that programmers working in this field are not computer science specialists but more of domain experts. Hence, they require a simple language to express custom rules.

A system for classifying wood-using industries and recording statistics for automatic data processing.

Science.gov (United States)

E.W. Fobes; R.W. Rowe

1968-01-01

A system for classifying wood-using industries and recording pertinent statistics for automatic data processing is described. Forms and coding instructions for recording data of primary processing plants are included.

a Fuzzy Automatic CAR Detection Method Based on High Resolution Satellite Imagery and Geodesic Morphology

Science.gov (United States)

Zarrinpanjeh, N.; Dadrassjavan, F.

2017-09-01

Automatic car detection and recognition from aerial and satellite images is mostly practiced for the purpose of easy and fast traffic monitoring in cities and rural areas where direct approaches are proved to be costly and inefficient. Towards the goal of automatic car detection and in parallel with many other published solutions, in this paper, morphological operators and specifically Geodesic dilation are studied and applied on GeoEye-1 images to extract car items in accordance with available vector maps. The results of Geodesic dilation are then segmented and labeled to generate primitive car items to be introduced to a fuzzy decision making system, to be verified. The verification is performed inspecting major and minor axes of each region and the orientations of the cars with respect to the road direction. The proposed method is implemented and tested using GeoEye-1 pansharpen imagery. Generating the results it is observed that the proposed method is successful according to overall accuracy of 83%. It is also concluded that the results are sensitive to the quality of available vector map and to overcome the shortcomings of this method, it is recommended to consider spectral information in the process of hypothesis verification.

Semi-automatic watershed medical image segmentation methods for customized cancer radiation treatment planning simulation

International Nuclear Information System (INIS)

Kum Oyeon; Kim Hye Kyung; Max, N.

2007-01-01

A cancer radiation treatment planning simulation requires image segmentation to define the gross tumor volume, clinical target volume, and planning target volume. Manual segmentation, which is usual in clinical settings, depends on the operator's experience and may, in addition, change for every trial by the same operator. To overcome this difficulty, we developed semi-automatic watershed medical image segmentation tools using both the top-down watershed algorithm in the insight segmentation and registration toolkit (ITK) and Vincent-Soille's bottom-up watershed algorithm with region merging. We applied our algorithms to segment two- and three-dimensional head phantom CT data and to find pixel (or voxel) numbers for each segmented area, which are needed for radiation treatment optimization. A semi-automatic method is useful to avoid errors incurred by both human and machine sources, and provide clear and visible information for pedagogical purpose. (orig.)

WASTK: A Weighted Abstract Syntax Tree Kernel Method for Source Code Plagiarism Detection

Directory of Open Access Journals (Sweden)

Deqiang Fu

2017-01-01

Full Text Available In this paper, we introduce a source code plagiarism detection method, named WASTK (Weighted Abstract Syntax Tree Kernel, for computer science education. Different from other plagiarism detection methods, WASTK takes some aspects other than the similarity between programs into account. WASTK firstly transfers the source code of a program to an abstract syntax tree and then gets the similarity by calculating the tree kernel of two abstract syntax trees. To avoid misjudgment caused by trivial code snippets or frameworks given by instructors, an idea similar to TF-IDF (Term Frequency-Inverse Document Frequency in the field of information retrieval is applied. Each node in an abstract syntax tree is assigned a weight by TF-IDF. WASTK is evaluated on different datasets and, as a result, performs much better than other popular methods like Sim and JPlag.

Forensic Automatic Speaker Recognition Based on Likelihood Ratio Using Acoustic-phonetic Features Measured Automatically

Directory of Open Access Journals (Sweden)

Huapeng Wang

2015-01-01

Full Text Available Forensic speaker recognition is experiencing a remarkable paradigm shift in terms of the evaluation framework and presentation of voice evidence. This paper proposes a new method of forensic automatic speaker recognition using the likelihood ratio framework to quantify the strength of voice evidence. The proposed method uses a reference database to calculate the within- and between-speaker variability. Some acoustic-phonetic features are extracted automatically using the software VoiceSauce. The effectiveness of the approach was tested using two Mandarin databases: A mobile telephone database and a landline database. The experiment's results indicate that these acoustic-phonetic features do have some discriminating potential and are worth trying in discrimination. The automatic acoustic-phonetic features have acceptable discriminative performance and can provide more reliable results in evidence analysis when fused with other kind of voice features.

Development of an integrated thermal-hydraulics capability incorporating RELAP5 and PANTHER neutronics code

Energy Technology Data Exchange (ETDEWEB)

Page, R.; Jones, J.R.

1997-07-01

Ensuring that safety analysis needs are met in the future is likely to lead to the development of new codes and the further development of existing codes. It is therefore advantageous to define standards for data interfaces and to develop software interfacing techniques which can readily accommodate changes when they are made. Defining interface standards is beneficial but is necessarily restricted in application if future requirements are not known in detail. Code interfacing methods are of particular relevance with the move towards automatic grid frequency response operation where the integration of plant dynamic, core follow and fault study calculation tools is considered advantageous. This paper describes the background and features of a new code TALINK (Transient Analysis code LINKage program) used to provide a flexible interface to link the RELAP5 thermal hydraulics code with the PANTHER neutron kinetics and the SIBDYM whole plant dynamic modelling codes used by Nuclear Electric. The complete package enables the codes to be executed in parallel and provides an integrated whole plant thermal-hydraulics and neutron kinetics model. In addition the paper discusses the capabilities and pedigree of the component codes used to form the integrated transient analysis package and the details of the calculation of a postulated Sizewell `B` Loss of offsite power fault transient.

Development of an integrated thermal-hydraulics capability incorporating RELAP5 and PANTHER neutronics code

International Nuclear Information System (INIS)

Page, R.; Jones, J.R.

1997-01-01

Ensuring that safety analysis needs are met in the future is likely to lead to the development of new codes and the further development of existing codes. It is therefore advantageous to define standards for data interfaces and to develop software interfacing techniques which can readily accommodate changes when they are made. Defining interface standards is beneficial but is necessarily restricted in application if future requirements are not known in detail. Code interfacing methods are of particular relevance with the move towards automatic grid frequency response operation where the integration of plant dynamic, core follow and fault study calculation tools is considered advantageous. This paper describes the background and features of a new code TALINK (Transient Analysis code LINKage program) used to provide a flexible interface to link the RELAP5 thermal hydraulics code with the PANTHER neutron kinetics and the SIBDYM whole plant dynamic modelling codes used by Nuclear Electric. The complete package enables the codes to be executed in parallel and provides an integrated whole plant thermal-hydraulics and neutron kinetics model. In addition the paper discusses the capabilities and pedigree of the component codes used to form the integrated transient analysis package and the details of the calculation of a postulated Sizewell 'B' Loss of offsite power fault transient

Five-way Smoking Status Classification Using Text Hot-Spot Identification and Error-correcting Output Codes

OpenAIRE

Cohen, Aaron M.

2008-01-01

We participated in the i2b2 smoking status classification challenge task. The purpose of this task was to evaluate the ability of systems to automatically identify patient smoking status from discharge summaries. Our submission included several techniques that we compared and studied, including hot-spot identification, zero-vector filtering, inverse class frequency weighting, error-correcting output codes, and post-processing rules. We evaluated our approaches using the same methods as the i2...

Automatic color preference correction for color reproduction

Science.gov (United States)

Tsukada, Masato; Funayama, Chisato; Tajima, Johji

2000-12-01

The reproduction of natural objects in color images has attracted a great deal of attention. Reproduction more pleasing colors of natural objects is one of the methods available to improve image quality. We developed an automatic color correction method to maintain preferred color reproduction for three significant categories: facial skin color, green grass and blue sky. In this method, a representative color in an object area to be corrected is automatically extracted from an input image, and a set of color correction parameters is selected depending on the representative color. The improvement in image quality for reproductions of natural image was more than 93 percent in subjective experiments. These results show the usefulness of our automatic color correction method for the reproduction of preferred colors.

Comparisons of coded aperture imaging using various apertures and decoding methods

International Nuclear Information System (INIS)

Chang, L.T.; Macdonald, B.; Perez-Mendez, V.

1976-07-01

The utility of coded aperture γ camera imaging of radioisotope distributions in Nuclear Medicine is in its ability to give depth information about a three dimensional source. We have calculated imaging with Fresnel zone plate and multiple pinhole apertures to produce coded shadows and reconstruction of these shadows using correlation, Fresnel diffraction, and Fourier transform deconvolution. Comparisons of the coded apertures and decoding methods are made by evaluating their point response functions both for in-focus and out-of-focus image planes. Background averages and standard deviations were calculated. In some cases, background subtraction was made using combinations of two complementary apertures. Results using deconvolution reconstruction for finite numbers of events are also given

The use of automatic programming techniques for fault tolerant computing systems

Science.gov (United States)

Wild, C.

1985-01-01

It is conjectured that the production of software for ultra-reliable computing systems such as required by Space Station, aircraft, nuclear power plants and the like will require a high degree of automation as well as fault tolerance. In this paper, the relationship between automatic programming techniques and fault tolerant computing systems is explored. Initial efforts in the automatic synthesis of code from assertions to be used for error detection as well as the automatic generation of assertions and test cases from abstract data type specifications is outlined. Speculation on the ability to generate truly diverse designs capable of recovery from errors by exploring alternate paths in the program synthesis tree is discussed. Some initial thoughts on the use of knowledge based systems for the global detection of abnormal behavior using expectations and the goal-directed reconfiguration of resources to meet critical mission objectives are given. One of the sources of information for these systems would be the knowledge captured during the automatic programming process.

A Review of Automatic Methods Based on Image Processing Techniques for Tuberculosis Detection from Microscopic Sputum Smear Images.

Science.gov (United States)

Panicker, Rani Oomman; Soman, Biju; Saini, Gagan; Rajan, Jeny

2016-01-01

Tuberculosis (TB) is an infectious disease caused by the bacteria Mycobacterium tuberculosis. It primarily affects the lungs, but it can also affect other parts of the body. TB remains one of the leading causes of death in developing countries, and its recent resurgences in both developed and developing countries warrant global attention. The number of deaths due to TB is very high (as per the WHO report, 1.5 million died in 2013), although most are preventable if diagnosed early and treated. There are many tools for TB detection, but the most widely used one is sputum smear microscopy. It is done manually and is often time consuming; a laboratory technician is expected to spend at least 15 min per slide, limiting the number of slides that can be screened. Many countries, including India, have a dearth of properly trained technicians, and they often fail to detect TB cases due to the stress of a heavy workload. Automatic methods are generally considered as a solution to this problem. Attempts have been made to develop automatic approaches to identify TB bacteria from microscopic sputum smear images. In this paper, we provide a review of automatic methods based on image processing techniques published between 1998 and 2014. The review shows that the accuracy of algorithms for the automatic detection of TB increased significantly over the years and gladly acknowledges that commercial products based on published works also started appearing in the market. This review could be useful to researchers and practitioners working in the field of TB automation, providing a comprehensive and accessible overview of methods of this field of research.

SPACE CHARGE SIMULATION METHODS INCORPORATED IN SOME MULTI - PARTICLE TRACKING CODES AND THEIR RESULTS COMPARISON

International Nuclear Information System (INIS)

BEEBE - WANG, J.; LUCCIO, A.U.; D IMPERIO, N.; MACHIDA, S.

2002-01-01

Space charge in high intensity beams is an important issue in accelerator physics. Due to the complicity of the problems, the most effective way of investigating its effect is by computer simulations. In the resent years, many space charge simulation methods have been developed and incorporated in various 2D or 3D multi-particle-tracking codes. It has becoming necessary to benchmark these methods against each other, and against experimental results. As a part of global effort, we present our initial comparison of the space charge methods incorporated in simulation codes ORBIT++, ORBIT and SIMPSONS. In this paper, the methods included in these codes are overviewed. The simulation results are presented and compared. Finally, from this study, the advantages and disadvantages of each method are discussed

SPACE CHARGE SIMULATION METHODS INCORPORATED IN SOME MULTI - PARTICLE TRACKING CODES AND THEIR RESULTS COMPARISON.

Energy Technology Data Exchange (ETDEWEB)

BEEBE - WANG,J.; LUCCIO,A.U.; D IMPERIO,N.; MACHIDA,S.

2002-06-03

Space charge in high intensity beams is an important issue in accelerator physics. Due to the complicity of the problems, the most effective way of investigating its effect is by computer simulations. In the resent years, many space charge simulation methods have been developed and incorporated in various 2D or 3D multi-particle-tracking codes. It has becoming necessary to benchmark these methods against each other, and against experimental results. As a part of global effort, we present our initial comparison of the space charge methods incorporated in simulation codes ORBIT++, ORBIT and SIMPSONS. In this paper, the methods included in these codes are overviewed. The simulation results are presented and compared. Finally, from this study, the advantages and disadvantages of each method are discussed.

ORIGEN-ARP 2.00, Isotope Generation and Depletion Code System-Matrix Exponential Method with GUI and Graphics Capability

International Nuclear Information System (INIS)

2002-01-01

1 - Description of program or function: ORIGEN-ARP was developed for the Nuclear Regulatory Commission and the Department of Energy to satisfy a need for an easy-to-use standardized method of isotope depletion/decay analysis for spent fuel, fissile material, and radioactive material. It can be used to solve for spent fuel characterization, isotopic inventory, radiation source terms, and decay heat. This release of ORIGEN-ARP is a standalone code package that contains an updated version of the SCALE-4.4a ORIGEN-S code. It contains a subset of the modules, data libraries, and miscellaneous utilities in SCALE-4.4a. This package is intended for users who do not need the entire SCALE package. ORIGEN-ARP 2.00 (2-12-2002) differs from the previous release ORIGEN-ARP 1.0 (July 2001) in the following ways: 1.The neutron source and energy spectrum routines were replaced with computational algorithms and data from the SOURCES-4B code (RSICC package CCC-661) to provide more accurate spontaneous fission and (alpha,n) neutron sources, and a delayed neutron source capability was added. 2.The printout of the fixed energy group structure photon tables was removed. Gamma sources and spectra are now printed for calculations using the Master Photon Library only. 2 - Methods: ORIGEN-ARP is an automated sequence to perform isotopic depletion / decay calculations using the ARP and ORIGEN-S codes of the SCALE system. The sequence includes the OrigenArp for Windows graphical user interface (GUI) that prepares input for ARP (Automated Rapid Processing) and ORIGEN-S. ARP automatically interpolates cross sections for the ORIGEN-S depletion/decay analysis using enrichment, burnup, and, optionally moderator density, from a set of libraries generated with the SCALE SAS2 depletion sequence. Library sets for four LWR fuel assembly designs (BWR 8 x 8, PWR 14 x 14, 15 x 15, 17 x 17) are included. The libraries span enrichments from 1.5 to 5 wt% U-235 and burnups of 0 to 60,000 MWD/MTU. Other

Linking the plasma code EDGE2D to the neutral code NIMBUS for a self consistent transport model of the boundary

International Nuclear Information System (INIS)

De Matteis, A.

1987-01-01

This report describes the fully automatic linkage between the finite difference, two-dimensional code EDGE2D, based on the classical Braginskii partial differential equations of ion transport, and the Monte Carlo code NIMBUS, which solves the integral form of the stationary, linear Boltzmann equation for neutral transport in a plasma. The coupling has been performed for the real poloidal geometry of JET with two belt-limiters and real magnetic configurations with or without a single-null point. The new integrated system starts from the magnetic geometry computed by predictive or interpretative equilibrium codes and yields the plasma and neutrals characteristics in the edge

An inverse method for non linear ablative thermics with experimentation of automatic differentiation

Energy Technology Data Exchange (ETDEWEB)

Alestra, S [Simulation Information Technology and Systems Engineering, EADS IW Toulouse (France); Collinet, J [Re-entry Systems and Technologies, EADS ASTRIUM ST, Les Mureaux (France); Dubois, F [Professor of Applied Mathematics, Conservatoire National des Arts et Metiers Paris (France)], E-mail: stephane.alestra@eads.net, E-mail: jean.collinet@astrium.eads.net, E-mail: fdubois@cnam.fr

2008-11-01

Thermal Protection System is a key element for atmospheric re-entry missions of aerospace vehicles. The high level of heat fluxes encountered in such missions has a direct effect on mass balance of the heat shield. Consequently, the identification of heat fluxes is of great industrial interest but is in flight only available by indirect methods based on temperature measurements. This paper is concerned with inverse analyses of highly evolutive heat fluxes. An inverse problem is used to estimate transient surface heat fluxes (convection coefficient), for degradable thermal material (ablation and pyrolysis), by using time domain temperature measurements on thermal protection. The inverse problem is formulated as a minimization problem involving an objective functional, through an optimization loop. An optimal control formulation (Lagrangian, adjoint and gradient steepest descent method combined with quasi-Newton method computations) is then developed and applied, using Monopyro, a transient one-dimensional thermal model with one moving boundary (ablative surface) that has been developed since many years by ASTRIUM-ST. To compute numerically the adjoint and gradient quantities, for the inverse problem in heat convection coefficient, we have used both an analytical manual differentiation and an Automatic Differentiation (AD) engine tool, Tapenade, developed at INRIA Sophia-Antipolis by the TROPICS team. Several validation test cases, using synthetic temperature measurements are carried out, by applying the results of the inverse method with minimization algorithm. Accurate results of identification on high fluxes test cases, and good agreement for temperatures restitutions, are obtained, without and with ablation and pyrolysis, using bad fluxes initial guesses. First encouraging results with an automatic differentiation procedure are also presented in this paper.

An automatic gain matching method for {gamma}-ray spectra obtained with a multi-detector array

Energy Technology Data Exchange (ETDEWEB)

Pattabiraman, N.S.; Chintalapudi, S.N.; Ghugre, S.S. E-mail: ssg@alpha.iuc.res.in

2004-07-01

The increasing size of data sets from large multi-detector arrays makes the traditional approach to the pre-evaluation of the data difficult and time consuming. The pre-sorting involves detection and correction of the observed on-line drifts followed by calibration of the raw data. A new method for automatic detection and correction of these instrumental drifts is presented. An application of this method to the data acquired using a multi-Clover array is discussed.

An automatic gain matching method for γ-ray spectra obtained with a multi-detector array

International Nuclear Information System (INIS)

Pattabiraman, N.S.; Chintalapudi, S.N.; Ghugre, S.S.

2004-01-01

The increasing size of data sets from large multi-detector arrays makes the traditional approach to the pre-evaluation of the data difficult and time consuming. The pre-sorting involves detection and correction of the observed on-line drifts followed by calibration of the raw data. A new method for automatic detection and correction of these instrumental drifts is presented. An application of this method to the data acquired using a multi-Clover array is discussed

Automatic measurement for solid state track detectors

International Nuclear Information System (INIS)

Ogura, Koichi

1982-01-01

Since in solid state track detectors, their tracks are measured with a microscope, observers are forced to do hard works that consume time and labour. This causes to obtain poor statistic accuracy or to produce personal error. Therefore, many researches have been done to aim at simplifying and automating track measurement. There are two categories in automating the measurement: simple counting of the number of tracks and the requirements to know geometrical elements such as the size of tracks or their coordinates as well as the number of tracks. The former is called automatic counting and the latter automatic analysis. The method to generally evaluate the number of tracks in automatic counting is the estimation of the total number of tracks in the total detector area or in a field of view of a microscope. It is suitable for counting when the track density is higher. The method to count tracks one by one includes the spark counting and the scanning microdensitometer. Automatic analysis includes video image analysis in which the high quality images obtained with a high resolution video camera are processed with a micro-computer, and the tracks are automatically recognized and measured by feature extraction. This method is described in detail. In many kinds of automatic measurements reported so far, frequently used ones are ''spark counting'' and ''video image analysis''. (Wakatsuki, Y.)

The Potential of Automatic Word Comparison for Historical Linguistics.

Science.gov (United States)

List, Johann-Mattis; Greenhill, Simon J; Gray, Russell D

2017-01-01

The amount of data from languages spoken all over the world is rapidly increasing. Traditional manual methods in historical linguistics need to face the challenges brought by this influx of data. Automatic approaches to word comparison could provide invaluable help to pre-analyze data which can be later enhanced by experts. In this way, computational approaches can take care of the repetitive and schematic tasks leaving experts to concentrate on answering interesting questions. Here we test the potential of automatic methods to detect etymologically related words (cognates) in cross-linguistic data. Using a newly compiled database of expert cognate judgments across five different language families, we compare how well different automatic approaches distinguish related from unrelated words. Our results show that automatic methods can identify cognates with a very high degree of accuracy, reaching 89% for the best-performing method Infomap. We identify the specific strengths and weaknesses of these different methods and point to major challenges for future approaches. Current automatic approaches for cognate detection-although not perfect-could become an important component of future research in historical linguistics.

Vortex flows in the solar chromosphere. I. Automatic detection method

Science.gov (United States)

Kato, Y.; Wedemeyer, S.

2017-05-01

Solar "magnetic tornadoes" are produced by rotating magnetic field structures that extend from the upper convection zone and the photosphere to the corona of the Sun. Recent studies show that these kinds of rotating features are an integral part of atmospheric dynamics and occur on a large range of spatial scales. A systematic statistical study of magnetic tornadoes is a necessary next step towards understanding their formation and their role in mass and energy transport in the solar atmosphere. For this purpose, we develop a new automatic detection method for chromospheric swirls, meaning the observable signature of solar tornadoes or, more generally, chromospheric vortex flows and rotating motions. Unlike existing studies that rely on visual inspections, our new method combines a line integral convolution (LIC) imaging technique and a scalar quantity that represents a vortex flow on a two-dimensional plane. We have tested two detection algorithms, based on the enhanced vorticity and vorticity strength quantities, by applying them to three-dimensional numerical simulations of the solar atmosphere with CO5BOLD. We conclude that the vorticity strength method is superior compared to the enhanced vorticity method in all aspects. Applying the method to a numerical simulation of the solar atmosphere reveals very abundant small-scale, short-lived chromospheric vortex flows that have not been found previously by visual inspection.

An Automatic Detection Method of Nanocomposite Film Element Based on GLCM and Adaboost M1

Directory of Open Access Journals (Sweden)

Hai Guo

2015-01-01

Full Text Available An automatic detection model adopting pattern recognition technology is proposed in this paper; it can realize the measurement to the element of nanocomposite film. The features of gray level cooccurrence matrix (GLCM can be extracted from different types of surface morphology images of film; after that, the dimension reduction of film can be handled by principal component analysis (PCA. So it is possible to identify the element of film according to the Adaboost M1 algorithm of a strong classifier with ten decision tree classifiers. The experimental result shows that this model is superior to the ones of SVM (support vector machine, NN and BayesNet. The method proposed can be widely applied to the automatic detection of not only nanocomposite film element but also other nanocomposite material elements.

A computer code for fault tree calculations: PATREC

International Nuclear Information System (INIS)

Blin, A.; Carnino, A.; Koen, B.V.; Duchemin, B.; Lanore, J.M.; Kalli, H.

1978-01-01

A computer code for evaluating the reliability of complex system by fault tree is described in this paper. It uses pattern recognition approach and programming techniques from IBM PL1 language. It can take account of many of the present day problems: multi-dependencies treatment, dispersion in the reliability data parameters, influence of common mode failures. The code is running currently since two years now in Commissariat a l'Energie Atomique Saclay center and shall be used in a future extension for automatic fault trees construction

Towards Qualifiable Code Generation from a Clocked Synchronous Subset of Modelica

Directory of Open Access Journals (Sweden)

Bernhard Thiele

2015-01-01

Full Text Available So far no qualifiable automatic code generators (ACGs are available for Modelica. Hence, digital control applications can be modeled and simulated in Modelica, but require tedious additional efforts (e.g., manual reprogramming to produce qualifiable target system production code. In order to more fully leverage the potential of a model-based development (MBD process in Modelica, a qualifiable automatic code generator is needed. Typical Modelica code generation is a fairly complex process which imposes a huge development burden to any efforts of tool qualification. This work aims at mapping a Modelica subset for digital control function development to a well-understood synchronous data-flow kernel language. This kernel language allows to resort to established compilation techniques for data-flow languages which are understood enough to be accepted by certification authorities. The mapping is established by providing a translational semantics from the Modelica subset to the synchronous data-flow kernel language. However, this translation turned out to be more intricate than initially expected and has given rise to several interesting issues that require suitable design decisions regarding the mapping and the language subset.

TRACK The New Beam Dynamics Code

CERN Document Server

Mustapha, Brahim; Ostroumov, Peter; Schnirman-Lessner, Eliane

2005-01-01

The new ray-tracing code TRACK was developed* to fulfill the special requirements of the RIA accelerator systems. The RIA lattice includes an ECR ion source, a LEBT containing a MHB and a RFQ followed by three SC linac sections separated by two stripping stations with appropriate magnetic transport systems. No available beam dynamics code meet all the necessary requirements for an end-to-end simulation of the RIA driver linac. The latest version of TRACK was used for end-to-end simulations of the RIA driver including errors and beam loss analysis.** In addition to the standard capabilities, the code includes the following new features: i) multiple charge states ii) realistic stripper model; ii) static and dynamic errors iii) automatic steering to correct for misalignments iv) detailed beam-loss analysis; v) parallel computing to perform large scale simulations. Although primarily developed for simulations of the RIA machine, TRACK is a general beam dynamics code. Currently it is being used for the design and ...

A gridding method for object-oriented PIC codes

International Nuclear Information System (INIS)

Gisler, G.; Peter, W.; Nash, H.; Acquah, J.; Lin, C.; Rine, D.

1993-01-01

A simple, rule-based gridding method for object-oriented PIC codes is described which is not only capable of dealing with complicated structures such as multiply-connected regions, but is also computationally faster than classical gridding techniques. Using, these smart grids, vacant cells (e.g., cells enclosed by conductors) will never have to be stored or calculated, thus avoiding the usual situation of having to zero electromagnetic fields within conductors after valuable cpu time has been spent in calculating the fields within these cells in the first place. This object-oriented gridding technique makes use of encapsulating characteristics of actual physical objects (particles, fields, grids, etc.) in C ++ classes and supporting software reuse of these entities through C ++ class inheritance relations. It has been implemented in the form of a simple two-dimensional plasma particle-in-cell code, and forms the initial effort of an AFOSR research project to develop a flexible software simulation environment for particle-in-cell algorithms based on object-oriented technology

Interface code between WIMS-AECL and RFSP-IST for coupling computing

International Nuclear Information System (INIS)

Xu Liangwang; Liu Yu; Jia Baoshan

2007-01-01

A code based on the protocols of Telnet and FTP is developed with C++ for coupling computing between WIMS-AECL and RFSP-IST. the input document of WIMS-AECL and RFSP-ISP cna be generated automatically and be submitted to server, the output document will be downloaded by the end of computing. the function of analyzing standard output document is also included in this code. After simple updating, this code can meet the requirement of other code using input document, e.g. CATHENA. A pilot study of the relation between void fraction and reactivity in TACR, some valuable conclusions has been achieved. (authors)

A FUZZY AUTOMATIC CAR DETECTION METHOD BASED ON HIGH RESOLUTION SATELLITE IMAGERY AND GEODESIC MORPHOLOGY

Directory of Open Access Journals (Sweden)

N. Zarrinpanjeh

2017-09-01

Full Text Available Automatic car detection and recognition from aerial and satellite images is mostly practiced for the purpose of easy and fast traffic monitoring in cities and rural areas where direct approaches are proved to be costly and inefficient. Towards the goal of automatic car detection and in parallel with many other published solutions, in this paper, morphological operators and specifically Geodesic dilation are studied and applied on GeoEye-1 images to extract car items in accordance with available vector maps. The results of Geodesic dilation are then segmented and labeled to generate primitive car items to be introduced to a fuzzy decision making system, to be verified. The verification is performed inspecting major and minor axes of each region and the orientations of the cars with respect to the road direction. The proposed method is implemented and tested using GeoEye-1 pansharpen imagery. Generating the results it is observed that the proposed method is successful according to overall accuracy of 83%. It is also concluded that the results are sensitive to the quality of available vector map and to overcome the shortcomings of this method, it is recommended to consider spectral information in the process of hypothesis verification.

Local coding based matching kernel method for image classification.

Directory of Open Access Journals (Sweden)

Yan Song

Full Text Available This paper mainly focuses on how to effectively and efficiently measure visual similarity for local feature based representation. Among existing methods, metrics based on Bag of Visual Word (BoV techniques are efficient and conceptually simple, at the expense of effectiveness. By contrast, kernel based metrics are more effective, but at the cost of greater computational complexity and increased storage requirements. We show that a unified visual matching framework can be developed to encompass both BoV and kernel based metrics, in which local kernel plays an important role between feature pairs or between features and their reconstruction. Generally, local kernels are defined using Euclidean distance or its derivatives, based either explicitly or implicitly on an assumption of Gaussian noise. However, local features such as SIFT and HoG often follow a heavy-tailed distribution which tends to undermine the motivation behind Euclidean metrics. Motivated by recent advances in feature coding techniques, a novel efficient local coding based matching kernel (LCMK method is proposed. This exploits the manifold structures in Hilbert space derived from local kernels. The proposed method combines advantages of both BoV and kernel based metrics, and achieves a linear computational complexity. This enables efficient and scalable visual matching to be performed on large scale image sets. To evaluate the effectiveness of the proposed LCMK method, we conduct extensive experiments with widely used benchmark datasets, including 15-Scenes, Caltech101/256, PASCAL VOC 2007 and 2011 datasets. Experimental results confirm the effectiveness of the relatively efficient LCMK method.

Automatic structural scene digitalization.

Science.gov (United States)

Tang, Rui; Wang, Yuhan; Cosker, Darren; Li, Wenbin

2017-01-01

In this paper, we present an automatic system for the analysis and labeling of structural scenes, floor plan drawings in Computer-aided Design (CAD) format. The proposed system applies a fusion strategy to detect and recognize various components of CAD floor plans, such as walls, doors, windows and other ambiguous assets. Technically, a general rule-based filter parsing method is fist adopted to extract effective information from the original floor plan. Then, an image-processing based recovery method is employed to correct information extracted in the first step. Our proposed method is fully automatic and real-time. Such analysis system provides high accuracy and is also evaluated on a public website that, on average, archives more than ten thousands effective uses per day and reaches a relatively high satisfaction rate.

Automatic Peak Selection by a Benjamini-Hochberg-Based Algorithm

KAUST Repository

Abbas, Ahmed; Kong, Xin-Bing; Liu, Zhi; Jing, Bing-Yi; Gao, Xin

2013-01-01

A common issue in bioinformatics is that computational methods often generate a large number of predictions sorted according to certain confidence scores. A key problem is then determining how many predictions must be selected to include most of the true predictions while maintaining reasonably high precision. In nuclear magnetic resonance (NMR)-based protein structure determination, for instance, computational peak picking methods are becoming more and more common, although expert-knowledge remains the method of choice to determine how many peaks among thousands of candidate peaks should be taken into consideration to capture the true peaks. Here, we propose a Benjamini-Hochberg (B-H)-based approach that automatically selects the number of peaks. We formulate the peak selection problem as a multiple testing problem. Given a candidate peak list sorted by either volumes or intensities, we first convert the peaks into p-values and then apply the B-H-based algorithm to automatically select the number of peaks. The proposed approach is tested on the state-of-the-art peak picking methods, including WaVPeak [1] and PICKY [2]. Compared with the traditional fixed number-based approach, our approach returns significantly more true peaks. For instance, by combining WaVPeak or PICKY with the proposed method, the missing peak rates are on average reduced by 20% and 26%, respectively, in a benchmark set of 32 spectra extracted from eight proteins. The consensus of the B-H-selected peaks from both WaVPeak and PICKY achieves 88% recall and 83% precision, which significantly outperforms each individual method and the consensus method without using the B-H algorithm. The proposed method can be used as a standard procedure for any peak picking method and straightforwardly applied to some other prediction selection problems in bioinformatics. The source code, documentation and example data of the proposed method is available at http://sfb.kaust.edu.sa/pages/software.aspx. © 2013

Automatic Peak Selection by a Benjamini-Hochberg-Based Algorithm

KAUST Repository

Abbas, Ahmed

2013-01-07

A common issue in bioinformatics is that computational methods often generate a large number of predictions sorted according to certain confidence scores. A key problem is then determining how many predictions must be selected to include most of the true predictions while maintaining reasonably high precision. In nuclear magnetic resonance (NMR)-based protein structure determination, for instance, computational peak picking methods are becoming more and more common, although expert-knowledge remains the method of choice to determine how many peaks among thousands of candidate peaks should be taken into consideration to capture the true peaks. Here, we propose a Benjamini-Hochberg (B-H)-based approach that automatically selects the number of peaks. We formulate the peak selection problem as a multiple testing problem. Given a candidate peak list sorted by either volumes or intensities, we first convert the peaks into p-values and then apply the B-H-based algorithm to automatically select the number of peaks. The proposed approach is tested on the state-of-the-art peak picking methods, including WaVPeak [1] and PICKY [2]. Compared with the traditional fixed number-based approach, our approach returns significantly more true peaks. For instance, by combining WaVPeak or PICKY with the proposed method, the missing peak rates are on average reduced by 20% and 26%, respectively, in a benchmark set of 32 spectra extracted from eight proteins. The consensus of the B-H-selected peaks from both WaVPeak and PICKY achieves 88% recall and 83% precision, which significantly outperforms each individual method and the consensus method without using the B-H algorithm. The proposed method can be used as a standard procedure for any peak picking method and straightforwardly applied to some other prediction selection problems in bioinformatics. The source code, documentation and example data of the proposed method is available at http://sfb.kaust.edu.sa/pages/software.aspx. © 2013

Automatic planning for robots: review of methods and some ideas about structure and learning

Energy Technology Data Exchange (ETDEWEB)

Cuena, J.; Salmeron, C.

1983-01-01

After a brief review of the problems involved in the design of an automatic planner system, the attention is focused in the particular problems that appear when the planner is used to control the actions of a robot. As conclusion, the introduction of techniques for learning in order to improve the efficiency of a planner are suggested, and a method for it, at present in development, is presented. 14 references.

An improved method for storing and retrieving tabulated data in a scalar Monte Carlo code

International Nuclear Information System (INIS)

Hollenbach, D.F.; Reynolds, K.H.; Dodds, H.L.; Landers, N.F.; Petrie, L.M.

1990-01-01

The KENO-Va code is a production-level criticality safety code used to calculate the k eff of a system. The code is stochastic in nature, using a Monte Carlo algorithm to track individual particles one at a time through the system. The advent of computers with vector processors has generated an interest in improving KENO-Va to take advantage of the potential speed-up associated with these new processors. Unfortunately, the original Monte Carlo algorithm and method of storing and retrieving cross-section data is not adaptable to vector processing. This paper discusses an alternate method for storing and retrieving data that not only is readily vectorizable but also improves the efficiency of the current scalar code

TU-H-CAMPUS-JeP1-02: Fully Automatic Verification of Automatically Contoured Normal Tissues in the Head and Neck

Energy Technology Data Exchange (ETDEWEB)

McCarroll, R [UT MD Anderson Cancer Center, Houston, TX (United States); UT Health Science Center, Graduate School of Biomedical Sciences, Houston, TX (United States); Beadle, B; Yang, J; Zhang, L; Kisling, K; Balter, P; Stingo, F; Nelson, C; Followill, D; Court, L [UT MD Anderson Cancer Center, Houston, TX (United States); Mejia, M [University of Santo Tomas Hospital, Manila, Metro Manila (Philippines)

2016-06-15

Purpose: To investigate and validate the use of an independent deformable-based contouring algorithm for automatic verification of auto-contoured structures in the head and neck towards fully automated treatment planning. Methods: Two independent automatic contouring algorithms [(1) Eclipse’s Smart Segmentation followed by pixel-wise majority voting, (2) an in-house multi-atlas based method] were used to create contours of 6 normal structures of 10 head-and-neck patients. After rating by a radiation oncologist, the higher performing algorithm was selected as the primary contouring method, the other used for automatic verification of the primary. To determine the ability of the verification algorithm to detect incorrect contours, contours from the primary method were shifted from 0.5 to 2cm. Using a logit model the structure-specific minimum detectable shift was identified. The models were then applied to a set of twenty different patients and the sensitivity and specificity of the models verified. Results: Per physician rating, the multi-atlas method (4.8/5 point scale, with 3 rated as generally acceptable for planning purposes) was selected as primary and the Eclipse-based method (3.5/5) for verification. Mean distance to agreement and true positive rate were selected as covariates in an optimized logit model. These models, when applied to a group of twenty different patients, indicated that shifts could be detected at 0.5cm (brain), 0.75cm (mandible, cord), 1cm (brainstem, cochlea), or 1.25cm (parotid), with sensitivity and specificity greater than 0.95. If sensitivity and specificity constraints are reduced to 0.9, detectable shifts of mandible and brainstem were reduced by 0.25cm. These shifts represent additional safety margins which might be considered if auto-contours are used for automatic treatment planning without physician review. Conclusion: Automatically contoured structures can be automatically verified. This fully automated process could be used to

A simple method for automatic measurement of excitation functions

International Nuclear Information System (INIS)

Ogawa, M.; Adachi, M.; Arai, E.

1975-01-01

An apparatus has been constructed to perform the sequence control of a beam-analysing magnet for automatic excitation function measurements. This device is also applied to the feedback control of the magnet to lock the beam energy. (Auth.)

Structural dynamics in LMFBR containment analysis. A brief survey of computational methods and codes

International Nuclear Information System (INIS)

Chang, Y.W.

1977-01-01

This paper gives a brief survey of the computational methods and codes available for LMFBR containment analysis. The various numerical methods commonly used in the computer codes are compared. It provides the reactor engineers to up-to-date information on the development of structural dynamics in LMFBR containment analysis. It can also be used as a basis for the selection of the numerical method in the future code development. First, the commonly used finite-difference expressions in the Lagrangian codes will be compared. Sample calculations will be used as a basis for discussing and comparing the accuracy of the various finite-difference representations. The distortion of the meshes will also be compared; the techniques used for eliminating the numerical instabilities will be discussed and compared using examples. Next, the numerical methods used in the Eulerian formulation will be compared, first among themselves and then with the Lagrangian formulations. Special emphasis is placed on the effect of mass diffusion of the Eulerian calculation on the propagation of discontinuities. Implicit and explicit numerical integrations will be discussed and results obtained from these two techniques will be compared. Then, the finite-element methods are compared with the finite-difference methods. The advantages and disadvantages of the two methods will be discussed in detail, together with the versatility and ease of application of the method to containment analysis having complex geometries. It will also be shown that the finite-element equations for a constant-pressure fluid element is identical to the finite-difference equations using contour integrations. Finally, conclusions based on this study will be given

Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.

Science.gov (United States)

Agarwal, Shashank; Yu, Hong

2009-12-01

Biomedical texts can be typically represented by four rhetorical categories: Introduction, Methods, Results and Discussion (IMRAD). Classifying sentences into these categories can benefit many other text-mining tasks. Although many studies have applied different approaches for automatically classifying sentences in MEDLINE abstracts into the IMRAD categories, few have explored the classification of sentences that appear in full-text biomedical articles. We first evaluated whether sentences in full-text biomedical articles could be reliably annotated into the IMRAD format and then explored different approaches for automatically classifying these sentences into the IMRAD categories. Our results show an overall annotation agreement of 82.14% with a Kappa score of 0.756. The best classification system is a multinomial naïve Bayes classifier trained on manually annotated data that achieved 91.95% accuracy and an average F-score of 91.55%, which is significantly higher than baseline systems. A web version of this system is available online at-http://wood.ims.uwm.edu/full_text_classifier/.

A Method for Automatic Extracting Intracranial Region in MR Brain Image

Science.gov (United States)

Kurokawa, Keiji; Miura, Shin; Nishida, Makoto; Kageyama, Yoichi; Namura, Ikuro

It is well known that temporal lobe in MR brain image is in use for estimating the grade of Alzheimer-type dementia. It is difficult to use only region of temporal lobe for estimating the grade of Alzheimer-type dementia. From the standpoint for supporting the medical specialists, this paper proposes a data processing approach on the automatic extraction of the intracranial region from the MR brain image. The method is able to eliminate the cranium region with the laplacian histogram method and the brainstem with the feature points which are related to the observations given by a medical specialist. In order to examine the usefulness of the proposed approach, the percentage of the temporal lobe in the intracranial region was calculated. As a result, the percentage of temporal lobe in the intracranial region on the process of the grade was in agreement with the visual sense standards of temporal lobe atrophy given by the medical specialist. It became clear that intracranial region extracted by the proposed method was good for estimating the grade of Alzheimer-type dementia.

A nodal Grean's function method of reactor core fuel management code, NGCFM2D

International Nuclear Information System (INIS)

Li Dongsheng; Yao Dong.

1987-01-01

This paper presents the mathematical model and program structure of the nodal Green's function method of reactor core fuel management code, NGCFM2D. Computing results of some reactor cores by NGCFM2D are analysed and compared with other codes

Automatic interpretation of seismic micro facies using the fuzzy mathematics method

Energy Technology Data Exchange (ETDEWEB)

Dongrun, G.; Gardner, G.H.F.

1988-01-01

The interpretation of seismic micro facies concentrates on changes involving single reflection or several reflections, and endeavors to explain the relations between these changes and stratigraphic variation or hydrocarbon accumulation. In most cases, one can not determine the geological significance of reflection character anomalies on single or several seismic sections. But when one maps them on a plane, their distribution may on the whole indicate the geological significance. It is stated how the fuzzy method is used on a VAX computer to automatically construct a plane map of the reflection character changes in a time window. What an interpreter needs to do for whole interpretation is only to provide some parameters, such as time window, threshold, weight coefficients etc.

Gray-Matter Volume Estimate Score: A Novel Semi-Automatic Method Measuring Early Ischemic Change on CT

OpenAIRE

Song, Dongbeom; Lee, Kijeong; Kim, Eun Hye; Kim, Young Dae; Lee, Hye Sun; Kim, Jinkwon; Song, Tae-Jin; Ahn, Sung Soo; Nam, Hyo Suk; Heo, Ji Hoe

2015-01-01

Background and Purpose We developed a novel method named Gray-matter Volume Estimate Score (GRAVES), measuring early ischemic changes on Computed Tomography (CT) semi-automatically by computer software. This study aimed to compare GRAVES and Alberta Stroke Program Early CT Score (ASPECTS) with regards to outcome prediction and inter-rater agreement. Methods This was a retrospective cohort study. Among consecutive patients with ischemic stroke in the anterior circulation who received intra-art...

An Optimal Linear Coding for Index Coding Problem

OpenAIRE

Pezeshkpour, Pouya

2015-01-01

An optimal linear coding solution for index coding problem is established. Instead of network coding approach by focus on graph theoric and algebraic methods a linear coding program for solving both unicast and groupcast index coding problem is presented. The coding is proved to be the optimal solution from the linear perspective and can be easily utilize for any number of messages. The importance of this work is lying mostly on the usage of the presented coding in the groupcast index coding ...

[Coding Causes of Death with IRIS Software. Impact in Navarre Mortality Statistic].

Science.gov (United States)

Floristán Floristán, Yugo; Delfrade Osinaga, Josu; Carrillo Prieto, Jesus; Aguirre Perez, Jesus; Moreno-Iribas, Conchi

2016-08-02

There are few studies that analyze changes in mortality statistics derived from the use of IRIS software, an automatic system for coding multiple causes of death and for the selection of the underlying cause of death, compared to manual coding. This study evaluated the impact of the use of IRIS in the Navarre mortality statistic. We proceeded to double coding 5,060 death certificates corresponding to residents in Navarra in 2014. We calculated coincidence between the two encodings for ICD10 chapters and for the list of causes of the Spanish National Statistics Institute (INE-102) and we estimated the change on mortality rates. IRIS automatically coded 90% of death certificates. The coincidence to 4 characters and in the same chapter of the CIE10 was 79.1% and 92.0%, respectively. Furthermore, coincidence with the short INE-102 list was 88.3%. Higher matches were found in death certificate of people under 65 years. In comparison with manual coding there was an increase in deaths from endocrine diseases (31%), mental disorders (19%) and disease of nervous system (9%), while a decrease of genitourinary system diseases was observed (21%). The coincidence at level of ICD10 chapters coding by IRIS in comparison to manual coding was 9 out of 10 deaths, similar to what is observed in other studies. The implementation of IRIS has led to increased of endocrine diseases, especially diabetes and hyperlipidaemia, and mental disorders, especially dementias.

A Method for Automatic Image Rectification and Stitching for Vehicle Yaw Marks Trajectory Estimation

Directory of Open Access Journals (Sweden)

Vidas Žuraulis

2016-02-01

Full Text Available The aim of this study has been to propose a new method for automatic rectification and stitching of the images taken on the accident site. The proposed method does not require any measurements to be performed on the accident site and thus it is frsjebalaee of measurement errors. The experimental investigation was performed in order to compare the vehicle trajectory estimation according to the yaw marks in the stitched image and the trajectory, reconstructed using the GPS data. The overall mean error of the trajectory reconstruction, produced by the method proposed in this paper was 0.086 m. It was only 0.18% comparing to the whole trajectory length.

A semi-automatic method for positioning a femoral bone reconstruction for strict view generation.

Science.gov (United States)

Milano, Federico; Ritacco, Lucas; Gomez, Adrian; Gonzalez Bernaldo de Quiros, Fernan; Risk, Marcelo

2010-01-01

In this paper we present a semi-automatic method for femoral bone positioning after 3D image reconstruction from Computed Tomography images. This serves as grounding for the definition of strict axial, longitudinal and anterior-posterior views, overcoming the problem of patient positioning biases in 2D femoral bone measuring methods. After the bone reconstruction is aligned to a standard reference frame, new tomographic slices can be generated, on which unbiased measures may be taken. This could allow not only accurate inter-patient comparisons but also intra-patient comparisons, i.e., comparisons of images of the same patient taken at different times. This method could enable medical doctors to diagnose and follow up several bone deformities more easily.

An approach to improving the structure of error-handling code in the linux kernel

DEFF Research Database (Denmark)

Saha, Suman; Lawall, Julia; Muller, Gilles

2011-01-01

The C language does not provide any abstractions for exception handling or other forms of error handling, leaving programmers to devise their own conventions for detecting and handling errors. The Linux coding style guidelines suggest placing error handling code at the end of each function, where...... an automatic program transformation that transforms error-handling code into this style. We have applied our transformation to the Linux 2.6.34 kernel source code, on which it reorganizes the error handling code of over 1800 functions, in about 25 minutes....

AELAS: Automatic ELAStic property derivations via high-throughput first-principles computation

Science.gov (United States)

Zhang, S. H.; Zhang, R. F.

2017-11-01

The elastic properties are fundamental and important for crystalline materials as they relate to other mechanical properties, various thermodynamic qualities as well as some critical physical properties. However, a complete set of experimentally determined elastic properties is only available for a small subset of known materials, and an automatic scheme for the derivations of elastic properties that is adapted to high-throughput computation is much demanding. In this paper, we present the AELAS code, an automated program for calculating second-order elastic constants of both two-dimensional and three-dimensional single crystal materials with any symmetry, which is designed mainly for high-throughput first-principles computation. Other derivations of general elastic properties such as Young's, bulk and shear moduli as well as Poisson's ratio of polycrystal materials, Pugh ratio, Cauchy pressure, elastic anisotropy and elastic stability criterion, are also implemented in this code. The implementation of the code has been critically validated by a lot of evaluations and tests on a broad class of materials including two-dimensional and three-dimensional materials, providing its efficiency and capability for high-throughput screening of specific materials with targeted mechanical properties. Program Files doi:http://dx.doi.org/10.17632/f8fwg4j9tw.1 Licensing provisions: BSD 3-Clause Programming language: Fortran Nature of problem: To automate the calculations of second-order elastic constants and the derivations of other elastic properties for two-dimensional and three-dimensional materials with any symmetry via high-throughput first-principles computation. Solution method: The space-group number is firstly determined by the SPGLIB code [1] and the structure is then redefined to unit cell with IEEE-format [2]. Secondly, based on the determined space group number, a set of distortion modes is automatically specified and the distorted structure files are generated