WorldWideScience

Sample records for arthrobacter species collected

  1. Biosorption of Cr(VI)_ and Cr(III)_Arthrobacter species

    OpenAIRE

    Gelagutashvili, E.; Pataraia, E. Ginturi D.; Gurielidze, M.

    2011-01-01

    The biosorption of Cr(VI)_ and Cr(III)_ Arthrobacter species (Arthrobacter globiformis and Arthrobacter oxidas) was studied simultaneous application dialysis and atomic absorption analysis. Also biosorption of Cr(VI) in the presence of Zn(II) during growth of Arthrobacter species and Cr(III) in the presence of Mn(II) were discussed. Comparative Cr(VI)_ and Cr(III)_ Arthrobacter species shown, that Cr(III) was more effectively adsorbed by both bacterium than Cr(VI). The adsorption capacity is ...

  2. Isolation of Arthrobacter species from the phyllosphere and demonstration of their epiphytic fitness

    OpenAIRE

    Scheublin, T.R.; Leveau, J.H.J.

    2013-01-01

    Bacteria of the genus Arthrobacter are common inhabitants of the soil environment, but can also be recovered from leaf surfaces (the phyllosphere). Using enrichment cultures on 4-chlorophenol, we succeeded in specifically isolating Arthrobacter bacteria from ground cover vegetation in an apple orchard. Based on 16S rRNA gene sequencing, the isolates were found to belong to at least three different species of Arthrobacter. Compared to the model bacterial epiphyte Pantoea agglomerans, the Arthr...

  3. Biosorption of Cr(VI)_ and Cr(III)_Arthrobacter species

    CERN Document Server

    Gelagutashvili, E; Gurielidze, M

    2011-01-01

    The biosorption of Cr(VI)_ and Cr(III)_ Arthrobacter species (Arthrobacter globiformis and Arthrobacter oxidas) was studied simultaneous application dialysis and atomic absorption analysis. Also biosorption of Cr(VI) in the presence of Zn(II) during growth of Arthrobacter species and Cr(III) in the presence of Mn(II) were discussed. Comparative Cr(VI)_ and Cr(III)_ Arthrobacter species shown, that Cr(III) was more effectively adsorbed by both bacterium than Cr(VI). The adsorption capacity is the same for both the Chromium-Arthrobacter systems. The biosorption constants for Cr(III) is higher than for Cr(VI) 5.7-5.9- fold for both species. Comparative Freundlich biosorption characteristics Cr(VI) Arthrobacter species of living and dry cells shown, that capacity(n) is in both cases the same(1.25,1.35). Dry cells have larger biosorption constant for both species, than living cells. Biosorption characteristics (K) and (n) for A. oxidas are without Mn(II) and in the presence of Mn(II) 2.6 x 10-4 (K), 1.37 (n) and 2...

  4. Ability of Cyanobacteria and Arthrobacter Species to Remove Gold Ions from Solution

    CERN Document Server

    Gelagutashvili, E; Rcheulichvili, A; Tsakadze, K; Bagdavadze, N; Kuchava, N; Djandjalia, M

    2012-01-01

    The biosorption of Au(III) - Spirulina platensis and Au(III) - Arthrobacter species (Arthrobacter globiformis and Arthrobacter oxidas) were studied at simultaneous application of dialysis and atomic absorption analysis. Also biosorption of Au(III) - Spirulina platensis at various pH were discussed. Biosorption constants for Au-cyanobacteris Spirulina platensis at different pH, and for Arthrobacter oxidas and Arthrobacter globiformis at pH=7.1 are : 1. K=3.91 x 10-4 (Au- Arthrobacter oxidas 61B, pH=7.1) 2. K=14.17 x 10-4 . (Au- Arthrobacter globiformis 151B, pH=7.1). 3. K=2.07x10-4 (Au- Spirulina platensis, pH=7.1) 4. K= 4.87x10-4 (Au- Spirulina platensis, pH=6.2) 5. K=8.7x10-4 (Au- Spirulina platensis, pH=8.4)

  5. Bioavailability of Ag(I) with Arthrobacter oxidas and Arthrobacter globiformis

    CERN Document Server

    Gelagutashvili, E; Ginturi, E; Bagdavadze, N; Kuchava, N; Tsakadze, K; Janjalia, M

    2012-01-01

    The biosorption of Ag(I)_ Arthrobacter species (Arthrobacter globiformis 151B and Arthrobacter oxidas 61B) was studied at simultaneous application of dialysis and atomic absorption analysis. The biosorption constants and nature of interaction for Ag(I) -Arthrobacter oxidas and Ag(I) -Arthrobacter globiformis were determined. The biosorption constants for Ag(I)- -Arthrobacter globiformis and for Ag(I) -Arthrobacter oxidas equal to 65.0 x10-4 and 35.0 x10-4 respectively.

  6. Isolation of Arthrobacter Bacteriophage from Soil †

    OpenAIRE

    Germida, James J.; Casida, L. E.

    1981-01-01

    Soil was percolated with water and various nutrient solutions, and then the percolates were analyzed for bacteriophages which produced plaques on various Arthrobacter strains. The water percolates did not contain detectable phage. In contrast, phages for A. globiformis strains ATCC 8010 and 4336, and for several recent Arthrobacter species soil isolates, were easily detected in nutrient broth, soil extract, and cation-complete medium percolates. These percolates did not contain phage that pro...

  7. Collective behaviour across animal species

    OpenAIRE

    DeLellis, P.; G. Polverino; Ustuner, G.; Abaid, N.; Macri, S.; Bollt, E. M.; M. Porfiri

    2014-01-01

    We posit a new geometric perspective to define, detect, and classify inherent patterns of collective behaviour across a variety of animal species. We show that machine learning techniques, and specifically the isometric mapping algorithm, allow the identification and interpretation of different types of collective behaviour in five social animal species. These results offer a first glimpse at the transformative potential of machine learning for ethology, similar to its impact on robotics, whe...

  8. Trichoderma species collected from Iran

    Institute of Scientific and Technical Information of China (English)

    Doostmorad Zafari

    2004-01-01

    @@ In order to identify Trichoderma species isolated from Iran, Trichoderma selective media and malt extract agar (MEA) were used to isolate Trichoderma species from the soil samples. All the cultures were purified on 2% water agar by hyphal tip method prior to morphological examination.Morphological observations were carried out on the cultures grown on 2% MEA and oat meal agar at 20℃ under ambient laboratory conditions. Macroscopic features of colony and microscopic features of conidiophore, phialid and conidium including position of phialids on conidiophore and shape and size of phialids and conidia were studied and recorded 3-5 days after inoculation. Out of 36 tested isolates, using morphological features and molecular data obtained from ITS1, ITS2 and 5.8S regions fourteen species were identified as follow: T. atroviride, T. ghanense, T. spirale, T. erinaceum, T. citrinoviride, T. saturnisporum,T. longibrachiatum , T. hamatum , T. harzianum, T. inhamatum , T. tomentosum , T.virens, T. asperellum, T. koningii. Among the species T. harzianum and T. virens isolates were the most frequent species. In addition of the mentioned species two Tichoderma sp. were collected from walnut rhizospher that they are not fit to any described species so far. Although one of them are T. brevicumpactum introduced informally.

  9. Modeling species-abundance relationships in multi-species collections

    Science.gov (United States)

    Peng, S.; Yin, Z.; Ren, H.; Guo, Q.

    2003-01-01

    Species-abundance relationship is one of the most fundamental aspects of community ecology. Since Motomura first developed the geometric series model to describe the feature of community structure, ecologists have developed many other models to fit the species-abundance data in communities. These models can be classified into empirical and theoretical ones, including (1) statistical models, i.e., negative binomial distribution (and its extension), log-series distribution (and its extension), geometric distribution, lognormal distribution, Poisson-lognormal distribution, (2) niche models, i.e., geometric series, broken stick, overlapping niche, particulate niche, random assortment, dominance pre-emption, dominance decay, random fraction, weighted random fraction, composite niche, Zipf or Zipf-Mandelbrot model, and (3) dynamic models describing community dynamics and restrictive function of environment on community. These models have different characteristics and fit species-abundance data in various communities or collections. Among them, log-series distribution, lognormal distribution, geometric series, and broken stick model have been most widely used.

  10. Uptake of Glyphosate by an Arthrobacter sp

    OpenAIRE

    Pipke, Rüdiger; Schulz, Arno; Amrhein, Nikolaus

    1987-01-01

    The uptake of glyphosate (N-[phosphonomethyl]glycine) by an Arthrobacter sp. which can utilize this herbicide as its sole source of phosphorus was investigated. Orthophosphate suppressed the expression of the uptake system for glyphosate and also competed with glyphosate for uptake. The Km for glyphosate uptake was 125 μM, and the Ki for orthophosphate was 24 μM. Organophosphonates as well as organophosphates inhibited glyphosate uptake, but only organophosphates and orthophosphate suppressed...

  11. The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese.

    Directory of Open Access Journals (Sweden)

    Christophe Monnet

    Full Text Available Arthrobacter arilaitensis is one of the major bacterial species found at the surface of cheeses, especially in smear-ripened cheeses, where it contributes to the typical colour, flavour and texture properties of the final product. The A. arilaitensis Re117 genome is composed of a 3,859,257 bp chromosome and two plasmids of 50,407 and 8,528 bp. The chromosome shares large regions of synteny with the chromosomes of three environmental Arthrobacter strains for which genome sequences are available: A. aurescens TC1, A. chlorophenolicus A6 and Arthrobacter sp. FB24. In contrast however, 4.92% of the A. arilaitensis chromosome is composed of ISs elements, a portion that is at least 15 fold higher than for the other Arthrobacter strains. Comparative genomic analyses reveal an extensive loss of genes associated with catabolic activities, presumably as a result of adaptation to the properties of the cheese surface habitat. Like the environmental Arthrobacter strains, A. arilaitensis Re117 is well-equipped with enzymes required for the catabolism of major carbon substrates present at cheese surfaces such as fatty acids, amino acids and lactic acid. However, A. arilaitensis has several specificities which seem to be linked to its adaptation to its particular niche. These include the ability to catabolize D-galactonate, a high number of glycine betaine and related osmolyte transporters, two siderophore biosynthesis gene clusters and a high number of Fe(3+/siderophore transport systems. In model cheese experiments, addition of small amounts of iron strongly stimulated the growth of A. arilaitensis, indicating that cheese is a highly iron-restricted medium. We suggest that there is a strong selective pressure at the surface of cheese for strains with efficient iron acquisition and salt-tolerance systems together with abilities to catabolize substrates such as lactic acid, lipids and amino acids.

  12. Inferring species decline from collection records

    DEFF Research Database (Denmark)

    Carpaneto, Giuseppe Maria; Mazziotta, Adriano; Valerio, Laura

    2007-01-01

    increased clearly as a consequence of the escalation of entomological surveys. Nevertheless, comparing R species (rollers) with all the scarab dung beetles from the first to the last quarter of the 20th century, the relative frequency of roller records decreased by 31%, while the relative number of occupied......The decline of roller dung beetles (Coleoptera, Scarabaeidae) in Italy, at national and regional level, was described using a database of both literature and unpublished data, since the late of 19th century. The probability of finding roller species was assessed for each decade of the 20th century...... UTM cells dropped by 23%. Six roller species showed a significant decline in Italy from the first to the second part of the 20th century, and nine in the last 30years. Other two species disappeared from the majority of the northern regions. Finally, the values of all the extinction indexes were...

  13. Agaritine content of 53 Agaricus species collected from nature

    DEFF Research Database (Denmark)

    Schulzova, V.; Hajslova, J.; Peroutka, R.;

    2009-01-01

    carcinogen. There was a huge variation in agaritine content between species, but less variation between samples of a species. Whereas the cultivated mushroom Agaricus bisporus commonly contain 200-500 mg agaritine kg-1 fresh weight, no less than 24 of the 53 species contained agaritine levels above 1000 mg...... kg-1 fresh weight. The highest level was found in A. elvensis containing up to 10, 000 mg kg-1 fresh weight. Twenty species contained intermediate levels (100-1000 mg kg-1), and nine species were below 100 mg kg-1. Some of the species producing low levels of agaritine might be candidates for future...... strain development of Agaricus mushrooms for cultivation. No correlation could be observed between agaritine content and size of the mushroom, week of the year when collected, year of collection, or site of collection. Besides occurring in the genus Agaricus, some species of the genera Leucoagaricus...

  14. Erythema caused by a localised skin infection with Arthrobacter mysorens

    Directory of Open Access Journals (Sweden)

    Chakraborty Trinad

    2010-12-01

    Full Text Available Abstract Background Skin erythemas of unknown origin are a frequent reason for consulting the general practitioner or dermatologist. Case presentation Here we report a case of an erythema resembling the erythema migrans manifestation of Lyme disease, but with atypical symptoms like persistent pruritus. The patient had no history of a recent tick-bite but displayed a positive serology for an advanced stage of Lyme borreliosis, which stood in contrast to the clinical manifestation of erythema migrans as a symptom of early Lyme disease. Three skin swabs and soil samples, collected in the area where the patient possibly acquired the infection, were examined by bacterial and fungal culture methods. Microorganisms were identified by using 16 S rRNA gene sequencing and bioinformatics. The patient and soil isolates were compared by employing RAPD analysis. The serum samples of the patient were examined by immunoblotting. Arthrobacter mysorens, a soil bacterium, was isolated from the collected skin and soil samples. The identity of both isolates was determined by molecular fingerprinting methods. A. mysorens was proven to be causative for the erythema by direct isolation from the affected skin and a positive serology, thus explaining the atypical appearance of the erythema compared to erythema migrans caused by Borrelia infection. Conclusions Infections with A.mysorens might be underreported and microbiological diagnostic techniques should be applied in cases of patients with unclear erythemas, resembling erythema migrans, without a history of tick bites.

  15. Cloning and sequencing of the trpE gene from Arthrobacter globiformis ATCC 8010 and several related subsurface Arthrobacter isolates

    Energy Technology Data Exchange (ETDEWEB)

    Chernova, T.; Viswanathan, V.K.; Austria, N.; Nichols, B.P.

    1998-09-01

    Tryptophan dependent mutants of Arthrobacter globiformis ATCC 8010 were isolated and trp genes were cloned by complementation and marker rescue of the auxotrophic strains. Rescue studies and preliminary sequence analysis reveal that at least the genes trpE, trpC, and trpB are clustered together in this organism. In addition, sequence analysis of the entire trpE gene, which encodes component I of anthranilate synthase, is described. Segments of the trpE gene from 17 subsurface isolates of Arthrobacter sp. were amplified by PCR and sequenced. The partial trpE sequences from the various strains were aligned and subjected to phylogenetic analysis. The data suggest that in addition to single base changes, recombination and genetic exchange play a major role in the evolution of the Arthrobacter genome.

  16. Arthrobacter P 1, a Fast Growing Versatile Methylotroph with Amine Oxidase as a Key Enzyme in the Metabolism of Methylated Amines

    NARCIS (Netherlands)

    Dijken, J.P. van; Veenhuis, M.; Harder, W.

    1981-01-01

    A facultative methylotrophic bacterium was isolated from enrichment cultures containing methylamine as the sole carbon source. It was tentatively identified as an Arthrobacter species. Extracts of cells grown on methylamine or ethylamine contained high levels of amine oxidase (E.C. 1.4.3) activity.

  17. Molecular characterization of some lignicolous species from fungal culture collection

    Directory of Open Access Journals (Sweden)

    Stević Nevena

    2014-01-01

    Full Text Available Culture collections of microorganisms, including fungi, are strain deposits recognised as Biological Resource Centers (BRCs with a great importance in science, industry and education. Their objective is to preserve the purity, viability and genomic integrity of every single strain as a member of such collection. Since improvement of molecular methods nowadays brought many novel approaches in manipulation with strains of microorganisms, they can also be useful for characterization of existing stored strains. ITS1 region in nuclear DNA is preferred barcoding marker for taxon identification, which can be explained by its great inter-species variability. This paper presents results from analysing ITS1 region sequences (17 obtained from fungal DNA of culture collection of autochthonous, lignicolous genera Piptoporus, Pleurotus, Ganoderma and Schizophyllum cultured on malt agar plates for 14 days at 25°C. BLAST (Basic Local Alignment Search Tool was used for comparison with online databases, while alignment of sequences was made with MEGA 5.10 software. Morphological determination of species or genus was confirmed for 13 cultures, while the others were disproved. The resulting alignment indicated small intra-species variability of ITS1 region and pointed to it as an ideal marker for verification of fungal culture collections' authenticity. [Projekat Ministarstva nauke Republike Srbije, br. III43002 and by the Provincial Secretariat for Science and Technological Development, Vojvodina, Serbia APV 114-4513592/2013-03: Molecular and phenotypic diversity of taxa of economical and epidemiological importance, and endangered and endemic species in Europe

  18. Improving Remote Species Identification through Efficient Training Data Collection

    Directory of Open Access Journals (Sweden)

    Claire A. Baldeck

    2014-03-01

    Full Text Available Plant species identification and mapping based on remotely-sensed spectral signatures is a challenging task with the potential to contribute enormously to ecological studies. Success in this task rests upon the appropriate collection and use of costly field-based training data, and researchers are in need of ways to improve collection efficiency based on quantitative evidence. Using imaging spectrometer data collected by the Carnegie Airborne Observatory for hundreds of field-identified tree crowns in Kruger National Park, South Africa, we developed woody plant species classification models and evaluated how classification accuracy increases with increasing numbers of training crowns. First, we show that classification accuracy must be estimated while respecting the crown as the basic unit of data; otherwise, accuracy will be overestimated and the amount of training data needed to perform successful classification will be underestimated. We found that classification accuracy and the number of training crowns needed to perform successful classification varied depending on the number and spectral separability of species in the model. We also used a modified Michaelis-Menten function to describe the empirical relationship between training crowns and model accuracy, and show how this function may be useful for predicting accuracy. This framework can assist researchers in designing field campaigns to maximize the efficiency of field data collection, and thus the amount of biodiversity information gained from remote species identification models.

  19. Predicting species distributions from samples collected along roadsides.

    Science.gov (United States)

    McCarthy, Kyle P; Fletcher, Robert J; Rota, Christopher T; Hutto, Richard L

    2012-02-01

    Predictive models of species distributions are typically developed with data collected along roads. Roadside sampling may provide a biased (nonrandom) sample; however, it is currently unknown whether roadside sampling limits the accuracy of predictions generated by species distribution models. We tested whether roadside sampling affects the accuracy of predictions generated by species distribution models by using a prospective sampling strategy designed specifically to address this issue. We built models from roadside data and validated model predictions at paired locations on unpaved roads and 200 m away from roads (off road), spatially and temporally independent from the data used for model building. We predicted species distributions of 15 bird species on the basis of point-count data from a landbird monitoring program in Montana and Idaho (U.S.A.). We used hierarchical occupancy models to account for imperfect detection. We expected predictions of species distributions derived from roadside-sampling data would be less accurate when validated with data from off-road sampling than when it was validated with data from roadside sampling and that model accuracy would be differentially affected by whether species were generalists, associated with edges, or associated with interior forest. Model performance measures (kappa, area under the curve of a receiver operating characteristic plot, and true skill statistic) did not differ between model predictions of roadside and off-road distributions of species. Furthermore, performance measures did not differ among edge, generalist, and interior species, despite a difference in vegetation structure along roadsides and off road and that 2 of the 15 species were more likely to occur along roadsides. If the range of environmental gradients is surveyed in roadside-sampling efforts, our results suggest that surveys along unpaved roads can be a valuable, unbiased source of information for species distribution models. PMID:22010858

  20. Sequence variation of Pleurotus species collected from Eastern Asia

    Directory of Open Access Journals (Sweden)

    A. Imtiaj

    2011-01-01

    Full Text Available The systematic and genetic relationship among different species of Pleurotus mushrooms is still unclear. Because of that, 20 strains of Pleurotus spp. collected from differing regions, such as Korea (P. djamor, P. eryngii, P. ostreatus, P. pulmonarius, China (P. cornucopiae, P. eryngii, P. ferulae, P. nebrodensis, P. ostreatus, and Taiwan (P. cornucopiae, P. cystidiosus, P. ostreatus were used to study their genetic make-up. In this study, we used DNA sequences of the ITS (Internal Transcribed Spacer region to analyze the genetic diversity of Pleurotus strains. A few differences were found in the sequences implying that all strains belonged to Pleurotus regardless of the geographical origin and species. This is also supported by phylogenetic analysis, which revealed that Pleurotus strains collected from different environments have a little genetic variation in case of differing species. Some strains belonging to the same species showed 100% similarities, even those collected from different regions, suggesting that strains studied might be distributed from a common ancestor.

  1. Rickettsia species in fleas collected from small mammals in Slovakia.

    Science.gov (United States)

    Špitalská, Eva; Boldiš, Vojtech; Mošanský, Ladislav; Sparagano, Olivier; Stanko, Michal

    2015-11-01

    Epidemiological and epizootiological studies of Rickettsia felis and other Rickettsia spp. are very important, because their natural cycle has not yet been established completely. In total, 315 fleas (Siphonaptera) of 11 species of Ceratophyllidae, Hystrichopsyllidae and Leptopsyllidae families were tested for the presence of Rickettsia species and Coxiella burnetii with conventional and specific quantitative real-time PCR assays. Fleas were collected from five rodent hosts (Myodes glareolus, Apodemus flavicollis, Apodemus agrarius, Microtus subterraneus, Microtus arvalis) and three shrew species (Sorex araneus, Neomys fodiens, Crocidura suaveolens) captured in Eastern and Southern Slovakia. Overall, Rickettsia spp. was found in 10.8% (34/315) of the tested fleas of Ctenophthalmus agyrtes, Ctenophthalmus solutus, Ctenophthalmus uncinatus and Nosopsyllus fasciatus species. Infected fleas were coming from A. flavicollis, A. agrarius, and M. glareolus captured in Eastern Slovakia. C. burnetii was not found in any fleas. R. felis, Rickettsia helvetica, unidentified Rickettsia, and rickettsial endosymbionts were identified in fleas infesting small mammals in the Košice region, Eastern Slovakia. This study is the first report of R. felis infection in C. solutus male flea collected from A. agrarius in Slovakia.

  2. Draft Genome Sequence of Arthrobacter chlorophenolicus Strain Mor30.16, Isolated from the Bean Rhizosphere

    OpenAIRE

    Miranda-Ríos, José Antonio; Ramírez-Trujillo, José Augusto; Nova-Franco, Bárbara; Lozano-Aguirre Beltrán, Luis Fernando; Iturriaga, Gabriel; Suárez-Rodríguez, Ramón

    2015-01-01

    Bacteria of the genus Arthrobacter are commonly found in the soil and plant rhizosphere. In this study we report the draft genome of Arthrobacter chlorophenolicus strain Mor30.16 that was isolated from rhizosphere of beans grown in Cuernavaca Morelos, Mexico. This strain promotes growth and ameliorates drought stress in bean plants.

  3. Wide Distribution of Closely Related, Antibiotic-Producing Arthrobacter Strains throughout the Arctic Ocean

    DEFF Research Database (Denmark)

    Wietz, Matthias; Månsson, Maria; Bowman, Jeff S.;

    2012-01-01

    We isolated 16 antibiotic-producing bacterial strains throughout the central Arctic Ocean, including seven Arthrobacter spp. with almost identical 16S rRNA gene sequences. These strains were numerically rare, as revealed using 454 pyrosequencing libraries. Arthrobacter spp. produced arthrobacilin...

  4. Complete Genome Sequencing of Protease-Producing Novel Arthrobacter sp. Strain IHBB 11108 Using PacBio Single-Molecule Real-Time Sequencing Technology

    OpenAIRE

    Kiran, Shashi; Swarnkar, Mohit K.; Pal, Mohinder; Thakur, Rishu; Tewari, Rupinder; Singh, Anil Kumar; Gulati, Arvind

    2015-01-01

    A previously uncharacterized species of the genus Arthrobacter, strain IHBB 11108 (MCC 2780), is a Gram-positive, strictly aerobic, nonmotile, cold-adapted, and protease-producing alkaliphilic actinobacterium, isolated from shallow undersurface water from Chandra Tal Lake, Lahaul-Spiti, India. The complete genome of the strain is 3.6 Mb in size with an average 58.97% G+C content.

  5. Adhesion of an Amylolytic Arthrobacter sp. to Starch-Containing Plastic Films

    OpenAIRE

    Imam, Syed H.; Gould, J. Michael

    1990-01-01

    Cells of the amylolytic bacterium KB-1 (thought to be an Arthrobacter sp.) adhered (∼70%) to the surface of plastic films composed of starch-poly (methylacrylate) graft copolymer (starch-PMA), but did not adhere (

  6. Three new rarely collected or endangered species of Annonaceae from Venezuela

    NARCIS (Netherlands)

    Chatrou, L.W.; Pirie, M.D.

    2005-01-01

    Three new species of Annonaceae from Venezuela are described here: Cremastosperma venezuelanum Pirie, Klarobelia subglobosa Chatrou, and Pseudomalmea wingfieldii Chatrou. All three are represented by few collections (in comparison to those of other Neotropical species of Annonaceae). Klarobelia subg

  7. Plant compounds that induce polychlorinated biphenyl biodegradation by Arthrobacter sp. strain B1B.

    OpenAIRE

    Gilbert, E S; Crowley, D. E.

    1997-01-01

    Plant compounds that induced Arthrobacter sp. strain B1B to cometabolize polychlorinated biphenyls (PCBs) were identified by a screening assay based on the formation of a 4,4'-dichlorobiphenyl ring fission product. A chemical component of spearmint (Mentha spicata), l-carvone, induced Arthrobacter sp. strain B1B to cometabolize Aroclor 1242, resulting in significant degradation of 26 peaks in the mixture, including selected tetra- and pentachlorobiphenyls. Evidence for PCB biodegradation incl...

  8. Degradation of the Phosphonate Herbicide Glyphosate by Arthrobacter atrocyaneus ATCC 13752

    OpenAIRE

    Pipke, Rüdiger; Amrhein, Nikolaus

    1988-01-01

    Of nine authentic Arthrobacter strains tested, only A. atrocyaneus ATCC 13752 was capable of using the herbicide glyphosate [N-(phosphonomethyl)glycine] as its sole source of phosphorus. Contrary to the previously isolated Arthrobacter sp. strain GLP-1, which degrades glyphosate via sarcosine, A. atrocyaneus metabolized glyphosate to aminomethylphosphonic acid. The carbon of aminomethylphosphonic acid was entirely converted to CO2. This is the first report on glyphosate degradation by a bacte...

  9. Genome sequence of Arthrobacter antarcticus strain W2, isolated from a slaughterhouse

    DEFF Research Database (Denmark)

    Herschend, Jakob; Raghupathi, Prem Krishnan; Røder, Henriette Lyng;

    2016-01-01

    We report the draft genome sequence ofArthrobacter antarcticusstrain W2, which was isolated from a wall of a small slaughterhouse in Denmark. The 4.43-Mb genome sequence was assembled into 170 contigs.......We report the draft genome sequence ofArthrobacter antarcticusstrain W2, which was isolated from a wall of a small slaughterhouse in Denmark. The 4.43-Mb genome sequence was assembled into 170 contigs....

  10. Core collections of potato (Solanum) species native to the USA

    Science.gov (United States)

    Potato has two wild relatives native to the USA, Solanum jamesii (jam) and S. fendleri (fen). Core collections are a useful tool for genebanks, identifying a ranked minimum number of samples that together encompass most of the total diversity. With diversity measured as presence of AFLP bands, core ...

  11. High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes

    Directory of Open Access Journals (Sweden)

    Thompson Dorothea K

    2009-09-01

    Full Text Available Abstract Background The genome of Arthrobacter sp. strain FB24 contains a chromate resistance determinant (CRD, consisting of a cluster of 8 genes located on a 10.6 kb fragment of a 96 kb plasmid. The CRD includes chrA, which encodes a putative chromate efflux protein, and three genes with amino acid similarities to the amino and carboxy termini of ChrB, a putative regulatory protein. There are also three novel genes that have not been previously associated with chromate resistance in other bacteria; they encode an oxidoreductase (most similar to malate:quinone oxidoreductase, a functionally unknown protein with a WD40 repeat domain and a lipoprotein. To delineate the contribution of the CRD genes to the FB24 chromate [Cr(VI] response, we evaluated the growth of mutant strains bearing regions of the CRD and transcript expression levels in response to Cr(VI challenge. Results A chromate-sensitive mutant (strain D11 was generated by curing FB24 of its 96-kb plasmid. Elemental analysis indicated that chromate-exposed cells of strain D11 accumulated three times more chromium than strain FB24. Introduction of the CRD into strain D11 conferred chromate resistance comparable to wild-type levels, whereas deletion of specific regions of the CRD led to decreased resistance. Using real-time reverse transcriptase PCR, we show that expression of each gene within the CRD is specifically induced in response to chromate but not by lead, hydrogen peroxide or arsenate. Higher levels of chrA expression were achieved when the chrB orthologs and the WD40 repeat domain genes were present, suggesting their possible regulatory roles. Conclusion Our findings indicate that chromate resistance in Arthrobacter sp. strain FB24 is due to chromate efflux through the ChrA transport protein. More importantly, new genes have been identified as having significant roles in chromate resistance. Collectively, the functional predictions of these additional genes suggest the

  12. On various species of Mus, collected by S. C. I. W. van Musschenbroek Esq. in Celebes

    NARCIS (Netherlands)

    Jentink, F.A.

    1879-01-01

    Last year we received trom S. C. I. W. van Musschenbroek, Ex-Resident of Menado, a large collection of Mammalia and Birds; and among them the following species of the genus Mus of Celebes. Four species are new to science and another species is new to the Celebian Fauna. It should here be observed, t

  13. Combined bioremediation of atrazine-contaminated soil by Pennisetum and Arthrobacter sp. strain DNS10.

    Science.gov (United States)

    Zhang, Ying; Ge, Shijie; Jiang, Mingyue; Jiang, Zhao; Wang, Zhigang; Ma, Bingbing

    2014-05-01

    Strain DNS10 was isolated from the black soil collected from the northeast of China which had been cultivated with atrazine as the sole nitrogen source. Pennisetum is a common plant in Heilongjiang Province of China. The main objective of this paper was to evaluate the efficiency of plant-microbe joint interactions (Arthrobacter sp. DNS10 + Pennisetum) in atrazine degradation compared with single-strain and single-plant effects. Plant-microbe joint interactions degraded 98.10 % of the atrazine, while single strain and single plant only degraded 87.38 and 66.71 % after a 30-day experimental period, respectively. The results indicated that plant-microbe joint interactions had a better degradation effect. Meanwhile, we found that plant-microbe joint interactions showed a higher microbial diversity. The results of microbial diversity illustrated that the positive effects of cropping could improve soil microbial growth and activity. In addition, we planted atrazine-sensitive plants (soybean) in the soil after repair. The results showed that soybean growth in soil previously treated with the plant-microbe joint interactions treatment was better compared with other treatments after 20 days of growth. This was further proved that the soil is more conducive for crop cultivation. Hence, plant-microbe joint interactions are considered to be a potential tool in the remediation of atrazine-contaminated soil.

  14. List of Strigiformes species in the Belgrade Natural History Museum bird collection

    Directory of Open Access Journals (Sweden)

    Novčić Ivana D.

    2004-01-01

    Full Text Available During re-inventory of the order Strigiformes in the ornithological collection of the Belgrade Natural History Museum, we recorded a total of 134 specimens, collected at over 40 localities throughout Serbia. Of these 71 are in the study collection, 59 in the exhibition collection, and four in the historical collection of birds. In view of the number of specimens diversity of species, and the geographical representatives, the collection of owls in the Natural History Museum represents an extremely important source of information for the taxon Strigiformes.

  15. Application of NAA Method to Study Chromium Uptake by Arthrobacter oxydans

    CERN Document Server

    Tsibakhashvili, N Ya; Kalabegishvili, T L; Kirkesali, E I; Frontasyeva, M V; Pomyakushina, E V; Pavlov, S S

    2002-01-01

    To study chromium uptake by Arthrobacter oxydans (Cr(VI)-reducer bacteria isolated from Columbia basalt rocks, USA) instrumental neutron activation analysis method was applied. It was established that chromate accumulation is dose-dependent and it is more intesive in the interval of concentrations of Cr(VI) (10-50 mg/l). At low concentrations of Cr(VI) (up to 50 mg/l) the most intensive formation of Cr(V) was also found (using ESR method). Besides, it was estimated that reduction from Cr(VI) to Cr(V) is faster process than the uptake of Cr(VI). According to ENAA measurements Cr(III), in constant to Cr(VI), is not accumulated in Arthrobacter oxydans cells up to concentration of 200 mg/l. Using epithermal neutron activation analysis the background levels of 17 major, minor and trace elements were determined in Arthrobacter oxydans.

  16. Potential Risk of Hybridization in Ex Situ Collections of Two Endangered Species of Sinojackia Hu (Styracaceae)

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Spontaneous hybridization in ex situ facilities can undermine the genetic integrity of ex situ collections and potentially contaminate open-pollinated seeds or seedlings destined for the reintroduction of endangered plant species into the wild. In the present study, the potential risk of hybridization between two endangered Chinese endemic species, namely Sinojackia xylocarpa Hu and S. rehderiana Hu, which are naturally allopatric species but were conserved ex situ in Wuhan Botanical Garden (WBG), Wuhan, China, were investigated over three consecutive years from 2003 to 2005. The entire overlapping flowering period of the two species was 14-20 d and the two species shared the same pollinator insects during the entire flowering season in WBG. The floral isolation between the two species was not an issue in the ex situ collection at WBG. The results suggest an opportunity for pollen transfer between species and a potential risk of genetic introgression and loss of genetic identity of open-pollinated seeds produced in the ex situ collection of these two endangered species. An artificial reciprocal cross between S. xylocarpa and S. rehderiana confirmed that the two congener species could readily set seeds, indicating no post-pollination barriers to hybridization and the importance of spatial isolation as a barrier to inter-specific crossing. Therefore, to manage these crossable species with overlapping flowering times and shared pollination vectors in ex situ facilities, spatial isolation should be carefully considered to minimize the possibility of spontaneous hybridization.

  17. On the parasitic fauna of two species of anurans collected from Sungai Pinang, Penang Island, Malaysia.

    Science.gov (United States)

    Wahab, A R; Andy Tan, W A; Intan, S

    2008-08-01

    A total of fifty anurans, comprising of Rana limnocharis and Bufo melanostictus were collected from Sungai Pinang, Balik Pulau, Penang. The prevalence, mean intensity and distribution of parasite species along the digestive tract were reported. Seven species of parasites were recorded. Blood parasites recovered were trypansomes and microfilariae.

  18. 76 FR 17147 - Proposed Information Collection; Monitoring Recovered Species After Delisting-American Peregrine...

    Science.gov (United States)

    2011-03-28

    ... Threatened Wildlife on August 25, 1999 (64 FR 46542). Section 4(g) of the ESA requires that all species that... Fish and Wildlife Service Proposed Information Collection; Monitoring Recovered Species After Delisting... procedures for systematically monitoring recovered wildlife and plants. The American peregrine falcon has...

  19. Two Species of Sargassum (Fucales, Phaeophyceae), Collected from Motupore Island, Papua New Guinea

    OpenAIRE

    AJISAKA, Tetsuro; アジサカ, テツロウ; 鰺坂, 哲朗

    1990-01-01

    Two species of Sargassum (Fucales, Phaeophyceae), S.peronii (MERTENS) C.AGARDH (subgenus Phyllotrichia) and S.polyporum MONTAGNE (subgenus Sargassum) were collected and described from Motupore Island, Papua New Guinea. The latter species was reported for the first time.

  20. Noteworthy lichen species in Poland collected in the Świętokrzyski National Park

    Directory of Open Access Journals (Sweden)

    Anna Łubek

    2014-08-01

    Full Text Available In this paper 25 species of the lichens new to the Świętokrzyski National Park are presented on the basis of recent collection and revision of the herbarial material from this arc. Some of these species are new to the Świętokrzykie Mountains and one have not been recorded in Poland so far.

  1. First Records of Two Species of Crabs (Crustacea: Decapoda: Brachyura Collected from Southern Korea

    Directory of Open Access Journals (Sweden)

    Hyun Sook Ko

    2013-04-01

    Full Text Available Two species of crabs, Homola orientalis Henderson, 1888 and Pseudomicippe nipponica (Sakai, 1938, are described and illustrated for the first time in Korea. Homola orientalis was collected at 30 m depth by trap from Busan, and P. nipponica was collected on the intertidal region in Seongsanpo, Jejudo Island. Homola orientalis is the first species of its family in the region. The family Homoldae is characterized by a linea homolica on the carapace and they carry camouflage in the form of sponges or cnidarians with subchelate of the fourth ambulatory legs. The Korean brachyuran fauna now comprises 223 species including the new records from this study.

  2. Pollen grain traits of oil species from the Novi Sad collection

    OpenAIRE

    Atlagić Jovanka; Marjanović-Jeromela Ana; Marinković Radovan; Terzić Sreten

    2009-01-01

    The collection of oil species in Novi Sad contains 12 species represented with 1-4 cultivars or landraces. In the continuous work on this collection in the sense of breeding of some of those species and their usage as a source of 'desirable genes' we analyzed pollen grain morphology (shape and size), as well as pollen viability. To determine mentioned pollen traits we used Axiovert 40C microscope together with a software package (AxioVision LE; Rel.4.3.) for measurem...

  3. CONTRIBUTIONS TO THE KNOWLEDGE OF THE STRUCTURE, DYNAMICS AND ECOLOGICAL PARAMETERS OF COLLECTED SPECIES OF INVERTEBRATES IN PLUM ORCHARDS

    Directory of Open Access Journals (Sweden)

    Mihai Tălmaciu

    2016-07-01

    Full Text Available The paper presents the results of the observations made in a plum fruit growing plantation in the years 2013 and 2014, belonging Teaching Station Vasile Adamachi within USAMV, Iasi County, at the Stanley variety. The material gathering it was made using soil traps type Barber, from May until August, at intervals between 10 and 20 days. The collection of 2013 was made on the following dates: 30.05, 15.06, 28.06, 12.07, 26.07, 10.08 and 24.08. In total 2013 were collected 151 species belonging to 19 species (taxa. The species (taxa with the largest number of species collected were Heteroptera species (bedbugs with 28 species, Dermestes laniarius L. with 27 species, Coccinella septempunctata L. with 27 species, Polydrosus sericeus Schall. with 15 species and Harpalus calceatus Duft. with 11 species. The collection of biological material in 2014 was made on the following dates: 19.05, 10.06, 29.06, 16.07, 06.08. In total in 2014 it was collected 402 species belonging to 29 species (taxa. The species (taxa with the largest number of species collected were Pseudophonus rufipes De Geer with 86 species, Harpalus distinguendus Duft. 68 species, Pseudephonus griseus Payk. 38 species, Orthoptera (locusts species with 33 species and Hymenoptera (ants species with 20 species.

  4. Potential Degradation of Swainsonine by Intracellular Enzymes of Arthrobacter sp. HW08

    Directory of Open Access Journals (Sweden)

    Haili Li

    2013-11-01

    Full Text Available Swainsonine (SW is a toxin produced by locoweeds and harmful to the livestock industry. Degrading SW by Arthrobacter sp. HW08 was demonstrated as a promising way to deal with SW poisoning. However, it is unknown which part of the subcellular enzymes in Arthrobacter sp. HW08 is responsible for biodegrading SW and whether the metabolites are atoxic. In this study, intracellular and extracellular enzymes of Arthrobacter sp. HW08 were isolated and their enzyme activity was evaluated. The metabolites were fed to mice, and physiological and histological properties of the treated mice were investigated. The results showed that only intracellular enzyme of Arthrobacter sp. HW08 (IEHW08 could degrade SW efficiently. Compared with mice in SW treatment group, mice in SW + IEHW08 treatment group (1 increased their body weights; (2 showed higher number of platelets and lower number of white blood cells; (3 decreased the levels of creatinine, urea nitrogen, alanine transaminase and aspartate aminotransferase in serum; (4 reduced the number of vacuolated cells in cerebellum, liver and kidney. All these data demonstrate that IEHW08 was potentially safe for mice, while keeping the capacity of degrading SW. This study indicates a possible application of IEHW08 as an additive in the livestock industry to protect animals from SW poisoning.

  5. Arthrobacter luteus restriction endonuclease cleavage map of X174 RF DNA

    NARCIS (Netherlands)

    Vereijken, J.M.; Mansfeld, A.D.M. van; Baas, P.D.; Jansz, H.S.

    1975-01-01

    Cleavage of X174 RF DNA with the restriction endonuclease from Arthrobacter luteus (Alu I) produces 23 fragments of approximately 24–1100 base pairs in length. The order of most of these fragments has been established by digestion of Haemophilus influenzae Rd (Hind II) and Haemophilus aegyptius (Hae

  6. [Heterotrophic Nitrification and Aerobic Denitrification of the Hypothermia Aerobic Denitrification Bacterium: Arthrobacter arilaitensis].

    Science.gov (United States)

    He, Teng-xia; Ni, Jiu-pai; Li, Zhen-lun; Sun, Quan; Ye Qing; Xu, Yi

    2016-03-15

    High concentrations of ammonium, nitrate and nitrite nitrogen were employed to clarify the abilities of heterotrophic nitrification and aerobic denitrification of Arthrobacter arilaitensis strain Y-10. Meanwhile, by means of inoculating the strain suspension into the mixed ammonium and nitrate, ammonium and nitrite nitrogen simulated wastewater, we studied the simultaneous nitrification and denitrification ability of Arthrobacter arilaitensis strain Y-10. In addition, cell optical density was assayed in each nitrogen removal process to analyze the relationship of cell growth and nitrogen removal efficiency. The results showed that the hypothermia denitrification strain Arthrobacter arilaitensis Y-10 exhibited high nitrogen removal efficiency during heterotrophic nitrification and aerobic denitrification. The ammonium, nitrate and nitrite removal rates were 65.0%, 100% and 61.2% respectively when strain Y-10 was cultivated for 4 d at 15°C with initial ammonium, nitrate and nitrite nitrogen concentrations of 208.43 mg · L⁻¹, 201.16 mg · L⁻¹ and 194.33 mg · L⁻¹ and initial pH of 7.2. Nitrite nitrogen could only be accumulated in the medium containing nitrate nitrogen during heterotrophic nitrification and aerobic denitrification process. Additionally, the ammonium nitrogen was mainly removed in the inorganic nitrogen mixed synthetic wastewater. In short, Arthrobacter arilaitensis Y-10 could conduct nitrification and denitrification effectively under aerobic condition and the ammonium nitrogen removal rate was more than 80.0% in the inorganic nitrogen mixed synthetic wastewater. PMID:27337904

  7. Collective decision making and social interaction rules in mixed-species flocks of songbirds.

    Science.gov (United States)

    Farine, Damien R; Aplin, Lucy M; Garroway, Colin J; Mann, Richard P; Sheldon, Ben C

    2014-09-01

    Associations in mixed-species foraging groups are common in animals, yet have rarely been explored in the context of collective behaviour. Despite many investigations into the social and ecological conditions under which individuals should form groups, we still know little about the specific behavioural rules that individuals adopt in these contexts, or whether these can be generalized to heterospecifics. Here, we studied collective behaviour in flocks in a community of five species of woodland passerine birds. We adopted an automated data collection protocol, involving visits by RFID-tagged birds to feeding stations equipped with antennae, over two winters, recording 91 576 feeding events by 1904 individuals. We demonstrated highly synchronized feeding behaviour within patches, with birds moving towards areas of the patch with the largest proportion of the flock. Using a model of collective decision making, we then explored the underlying decision rule birds may be using when foraging in mixed-species flocks. The model tested whether birds used a different decision rule for conspecifics and heterospecifics, and whether the rules used by individuals of different species varied. We found that species differed in their response to the distribution of conspecifics and heterospecifics across foraging patches. However, simulating decisions using the different rules, which reproduced our data well, suggested that the outcome of using different decision rules by each species resulted in qualitatively similar overall patterns of movement. It is possible that the decision rules each species uses may be adjusted to variation in mean species abundance in order for individuals to maintain the same overall flock-level response. This is likely to be important for maintaining coordinated behaviour across species, and to result in quick and adaptive flock responses to food resources that are patchily distributed in space and time.

  8. Collective decision making and social interaction rules in mixed-species flocks of songbirds.

    Science.gov (United States)

    Farine, Damien R; Aplin, Lucy M; Garroway, Colin J; Mann, Richard P; Sheldon, Ben C

    2014-09-01

    Associations in mixed-species foraging groups are common in animals, yet have rarely been explored in the context of collective behaviour. Despite many investigations into the social and ecological conditions under which individuals should form groups, we still know little about the specific behavioural rules that individuals adopt in these contexts, or whether these can be generalized to heterospecifics. Here, we studied collective behaviour in flocks in a community of five species of woodland passerine birds. We adopted an automated data collection protocol, involving visits by RFID-tagged birds to feeding stations equipped with antennae, over two winters, recording 91 576 feeding events by 1904 individuals. We demonstrated highly synchronized feeding behaviour within patches, with birds moving towards areas of the patch with the largest proportion of the flock. Using a model of collective decision making, we then explored the underlying decision rule birds may be using when foraging in mixed-species flocks. The model tested whether birds used a different decision rule for conspecifics and heterospecifics, and whether the rules used by individuals of different species varied. We found that species differed in their response to the distribution of conspecifics and heterospecifics across foraging patches. However, simulating decisions using the different rules, which reproduced our data well, suggested that the outcome of using different decision rules by each species resulted in qualitatively similar overall patterns of movement. It is possible that the decision rules each species uses may be adjusted to variation in mean species abundance in order for individuals to maintain the same overall flock-level response. This is likely to be important for maintaining coordinated behaviour across species, and to result in quick and adaptive flock responses to food resources that are patchily distributed in space and time. PMID:25214653

  9. Wild Musa Species Collection of Purwodadi Botanic Garden: Inventory and Its Morpho - taxonomic Review

    Directory of Open Access Journals (Sweden)

    Lia Hapsari

    2014-01-01

    Full Text Available Indonesia, being part of the center of origin of bananas (Musaceae, has a large number diversity of bananas both wild seeded species and edible seedless cultivated varieties. Inventory of wild Musa species in Purwodadi Botanic Garden has been conducted through compiling data records from PBG’s Registration section, field inspection and observation to living collections in the garden, herbarium specimens and literature studies. The results show that total 17 wild Musa accessions has been recorded planted in Purwodadi Botanic Garden since 1990 until 2012; comprises of 8 Musa acuminata sub species, 2 Musa balbisiana forms, 1 Musa ornata, 1 Musa troglodytarum, 1 Musa borneensis and 4 unidentified species Musa spp.; but only 8 living accessions remained in 2012. Morphotaxonomic review of those 8 wild Musa accessions remained will be discussed in this paper including their geographical distributions. According to its differentiated morphological characteristics observations, it is known that there are three accessions were resembled cultivars and one unidentified species have been determined its species level, so that their registration identity needs to be revised. It is important next to prioritize ex-situ conservation of wild Musa species not yet collected in Purwodadi Botanic Garden especially from Eastern Indonesia.

  10. Pollen grain traits of oil species from the Novi Sad collection

    Directory of Open Access Journals (Sweden)

    Atlagić Jovanka

    2009-01-01

    Full Text Available The collection of oil species in Novi Sad contains 12 species represented with 1-4 cultivars or landraces. In the continuous work on this collection in the sense of breeding of some of those species and their usage as a source of 'desirable genes' we analyzed pollen grain morphology (shape and size, as well as pollen viability. To determine mentioned pollen traits we used Axiovert 40C microscope together with a software package (AxioVision LE; Rel.4.3. for measurement of pollen length and width. Pollen viability was determined using a staining method (ALEXANDER, 1969. The results showed that species differ by pollen grain shape (round, egg-shaped, triangular and rod as well as by shape of exine (thick and spiky, thick to thin. In some species there was a specific number of apertures present (1-11. The size of viable pollen grains ranged from 29,10/12,58μ (coriander to 176,63/169,94μ (oil gourd, while non-viable pollen grains were always smaller (27,27/10,97μ to 119,62/100,86μ at the same plant species. Pollen viability of most species was around 80%. Lowest pollen viability was found in white flax (56,98%, and the highest in oil pumpkin (91,43%.

  11. Cryptic species of hairworm parasites revealed by molecular data and crowdsourcing of specimen collections.

    Science.gov (United States)

    Hanelt, Ben; Schmidt-Rhaesa, Andreas; Bolek, Matthew G

    2015-01-01

    Recognizing cryptic species promotes a better understanding of biodiversity, systematics, evolutionary biology, and biogeography. When cryptic species are disease-causing organisms, such as parasites, their correct recognition has important implications for the study of epidemiology, disease ecology, and host-parasite relationships. Freshwater nematomorphs (Nematomorpha: Gordiida) or hairworms, are an enigmatic yet fascinating group of parasites that are known to manipulate host behavior to aid transition from the parasitic phase, within terrestrial insects, to the free-living aquatic stage. Hairworm taxonomy has been hampered by a paucity of informative diagnostic characters and it has long been suspected that this group contains numerous cryptic species. Study of single hairworm species over large geographical areas has been difficult due to extremely rare encounters and unreliable methods of collecting adult worms. Here we report that by using crowdsourcing, citizen scientists have collected and submitted samples of Gordius cf. robustus from throughout its range in North America making its genetic study possible. Combined with our own collections, we examined samples from 28 localities within the USA; despite the collection of numerous hairworms from Canada and Mexico, G. cf. robustus were not collected outside of the contiguous United States. Mitochondrial CO1 genetic distances revealed that specimens grouped into 8 clades separated by 8-24.3%. In addition, molecular evidence from mitochondrial (CO1 and cytB) and nuclear (partial 28S, ITS1, 5.8S and ITS2) DNA suggests that these 8 clades are distinct species and that this group of species is paraphyletic, since the North American species G. attoni and the European species G. aquaticus and G. balticus group among the G. robustus lineages. Furthermore, there was a significant correlation between genetic (CO1) and geographic distance between the 8 Gordius species. This study demonstrates the value of involving the

  12. Electrochemical sensor based on Arthrobacter globiformis for cholinesterase activity determination.

    Science.gov (United States)

    Stoytcheva, Margarita; Zlatev, Roumen; Valdez, Benjamin; Magnin, Jean-Pierre; Velkova, Zdravka

    2006-07-15

    The sensors applied recently for determination of cholinesterase activity are mostly enzymatic amperometric sensors, in spite of their disadvantages: short life-time at ambient temperature, instability of the response, interferences, as well as passivation of the electrode surface. In the present paper a new approach for determination of cholinesterase activity was proposed, overcoming the main drawbacks of the analysis performed with amperometric enzymatic sensors. Instead of the immobilization of enzymes on a conducting electrode surface, whole cells of Arthrobacter globiformis, containing choline oxidase were fixed on a Clark type oxygen probe. Current proportional to bacteria respiration is registered as a sensor response. The application of whole cells of bacteria as a sensing element permits to achieve high stability of the response and long life-time of the sensor at ambient temperature, due to the conservation of the enzyme in its natural micro-environment inside the immobilized cells. The proposed sensor keeps its functionality more than 7 weeks stored in deionized water at ambient temperature. For the first 2 weeks the amplitude of the response decreases with only 10% and at the end of the studied 7 weeks period the response was 50% of the initial. The other advantages of the proposed sensor are: the dissolved oxygen is used as a mediator which concentration can be reliably and interferences free measured by the aim of a Clark type oxygen probe applied as a transducer; reproducible bacterial membranes can be elaborated by filtration of resuspended bacterial culture after preliminary determination of its activity; application of membranes containing lyophilized bacteria capable to be conserved infinitely long time and activated just before their application; negligible cost compared with the sensors based on immobilized enzymes. The steady-state response of the proposed bacterial sensor to choline obtained in 200 s is linear in the investigated

  13. Interspecific shared collective decision-making in two forensically important species.

    Science.gov (United States)

    Boulay, Julien; Deneubourg, Jean-Louis; Hédouin, Valéry; Charabidzé, Damien

    2016-02-10

    To date, the study of collective behaviour has mainly focused on intraspecific situations: the collective decision-making of mixed-species groups involving interspecific aggregation-segregation has received little attention. Here, we show that, in both conspecific and heterospecific groups, the larvae of two species (Lucilia sericata and Calliphora vomitoria, calliphorid carrion-feeding flies) were able to make a collective choice. In all groups, the choice was made within a few minutes and persisted throughout the period of the experiment. The monitoring of a focal individual within a group showed that these aggregations were governed by attractive and retentive effects of the group. Furthermore, the similarity observed between the conspecific and heterospecific groups suggested the existence of shared aggregation signals. The group size was found to have a stronger influence than the species of necrophagous larvae. These results should be viewed in relation to the well-known correlation between group size and heat generation. This study provides the first experimental examination of the dynamics of collective decision-making in mixed-species groups of invertebrates, contributing to our understanding of the cooperation-competition phenomenon in animal social groups.

  14. Characterization of a new clinical yeast species isolated from a strain collection of Tunisian hospitals

    NARCIS (Netherlands)

    Eddouzi, J.; Hofstetter, V.; Groenewald, M.; Manai, M.; Sanglard, S.

    2013-01-01

    From a collection of yeast isolates isolated from patients in Tunisian hospitals between September 2006 and July 2010, the yeast strain JEY63 (CBS 12513), isolated from a 50-year-old male that suffered from oral thrush, could not be identified to the species level using conventional methods used in

  15. Isolation, purification and characterization of xylanase produced by Arthrobacter sp. MTCC 5214 when grown in solid-state fermentation

    Digital Repository Service at National Institute of Oceanography (India)

    Khandeparker, R.; Bhosle, N.B.

    Thermoalkalophilic Arthrobacter sp. produced extracellular xylanase, when wheat bran, rice husk, rice bran and bagassae were used as carbon source under solid-state fermentation (SSF). The xylanase enzyme was isolated by ammonium sulfate (80...

  16. SDMdata: A Web-Based Software Tool for Collecting Species Occurrence Records.

    Directory of Open Access Journals (Sweden)

    Xiaoquan Kong

    Full Text Available It is important to easily and efficiently obtain high quality species distribution data for predicting the potential distribution of species using species distribution models (SDMs. There is a need for a powerful software tool to automatically or semi-automatically assist in identifying and correcting errors. Here, we use Python to develop a web-based software tool (SDMdata to easily collect occurrence data from the Global Biodiversity Information Facility (GBIF and check species names and the accuracy of coordinates (latitude and longitude. It is an open source software (GNU Affero General Public License/AGPL licensed allowing anyone to access and manipulate the source code. SDMdata is available online free of charge from .

  17. An Arthrobacter spp. bacteremia leading to fetal death and maternal disseminated intravascular coagulation.

    Science.gov (United States)

    Shigeta, Naoya; Ozaki, Kimiaki; Hori, Kensuke; Ito, Kimihiko; Nakayama, Masahiro; Nakahira, Kumiko; Yanagihara, Itaru

    2013-02-01

    A 34-year-old parous woman developed high fever and threatened preterm labor after a 1-day trip, for which she was receiving prenatal care at a hospital. Three days after onset, at 24 4/7 weeks of gestation, she was transferred to our hospital in an emergency. Soon after the woman's arrival at our hospital, the infant was spontaneously stillborn via a transvaginal delivery. Laboratory tests revealed severe maternal disseminated intravascular coagulation with renal and liver insufficiency. Histopathologic examination of the placenta revealed vast fibrin deposition and remarkable neutrophilic infiltration in the intervillous space, suggesting a rare bacterial infection caused by Arthrobacter spp. The bacteria were predominantly detected in the placenta and maternal blood serum by common bacterial 16S rRNA sequencing after polymerase chain reaction amplification. We report the first case, to our knowledge, of bacteremia with Arthrobacter spp., which may lead to maternal disseminated intravascular coagulation and intrauterine fetal death.

  18. A new species of Paraproto (Crustacea: Amphipoda: Phtisicidae) collected from the South Shetland Islands, Antarctica

    Science.gov (United States)

    Takeuchi, Ichiro

    2015-12-01

    A new species of amphipod crustacean (Amphipoda: Phtisicidae), Paraproto mccaini n. sp. is described based on specimens collected from south of Elephant Island, the South Shetland Islands near the Antarctic Peninsula. This species was first reported as Paraproto condylata (Haswell, 1885) [sensu lato], recorded from a temperate region of Australia. P. mccaini n. sp. is distinct from P. condylata [sensu stricto] by an elongated head with pereonite 1, presence of a mid-lateral projection on pereonites 2-4, and lack of a distal round projection on the propodus of gnathopod 2. Paraproto differs from Pseudoprotomima, the most phylogenetically similar genus, in having gills on pereonites 3 and 4.

  19. Improved biosorption for Cr(VI) reduction and removal by Arthrobacter viscosus using zeolite

    OpenAIRE

    Silva, Bruna Andreia Nogueira Airosa; Figueiredo, Hugo; Quintelas, C.; Neves, Isabel C.; Tavares, M.T.

    2012-01-01

    The aim of the present work was to optimize the reduction and removal of chromium from aqueous solutions by a biosorption system consisting of a bacteria supported on a zeolite. The system proposed combines the biosorption properties of Arthrobacter viscosus, with the ion exchange capacity of NaY zeolite. Experiments were also performed without the zeolite for comparison purposes. Experimental parameters such as solution pH, biomass concentration and initial Cr(VI) concentration were investig...

  20. Isolation and Preliminary Characterization of Twenty Bacteriophages Infecting Either Brevibacterium or Arthrobacter Strains

    OpenAIRE

    Trautwetter, Annie; Blanco, Carlos

    1988-01-01

    Thirty-seven bacteriophages plaquing on Corynebacterium, Brevibacterium, or Arthrobacter strains were isolated from soil or vegetation samples. Restriction analysis of phage DNA indicated that 20 phages were unique; one of them produced entirely turbid plaques on Brevibacterium ketoglutamicum and was characterized as temperate. All these phages were assigned to group B of the classification of Bradley (Bacteriol. Rev. 31:230-314, 1967) and had relatively narrow host ranges.

  1. Improving the Survival of Arthrobacter sp., CW9 during Spray Drying Monitored by Scan Electric Microscope

    OpenAIRE

    Zhenqiang Xia; Ming Zhu; Yanqiu Zhang

    2014-01-01

    The culture of an aquaculture probiotic, i.e., Arthrobacter sp., CW9, was spray dried with different carriers/protectants, in which Scan Electric Microscope (SEM) was used to analyze the surface of micro-paticles produced by spray-drying. Matrix of protectants, inlet temperature and feed rate were optimized according to the survival rate after spray drying. Scanning electron micrographs showed that cracks formed on the particle surface were a key factor in enhancing bacteria survival during s...

  2. Cesium and strontium tolerant Arthrobacter sp. strain KMSZP6 isolated from a pristine uranium ore deposit.

    Science.gov (United States)

    Swer, Pynskhem Bok; Joshi, Santa Ram; Acharya, Celin

    2016-12-01

    Arthrobacter sp. KMSZP6 isolated from a pristine uranium ore deposit at Domiasiat located in North-East India exhibited noteworthy tolerance for cesium (Cs) and strontium (Sr). The strain displayed a high minimum inhibitory concentration (MIC) of 400 mM for CsCl and for SrCl2. Flow cytometric analysis employing membrane integrity indicators like propidium iodide (PI) and thiazole orange (TO) indicated a greater sensitivity of Arthrobacter cells to cesium than to strontium. On being challenged with 75 mM of Cs, the cells sequestered 9612 mg Cs g(-1) dry weight of cells in 12 h. On being challenged with 75 mM of Sr, the cells sequestered 9989 mg Sr g(-1) dry weight of cells in 18 h. Heat killed cells exhibited limited Cs and Sr binding as compared to live cells highlighting the importance of cell viability for optimal binding. The association of the metals with Arthrobacter sp. KMSZP6 was further substantiated by Field Emission-Scanning Electron Microscopy (FE-SEM) coupled with Energy dispersive X-ray (EDX) spectroscopy. This organism tolerated up to 1 kGy (60)Co-gamma rays without loss of survival. The present report highlights the superior tolerance and binding capacity of the KMSZP6 strain for cesium and strontium over other earlier reported strains and reveals its potential for bioremediation of nuclear waste. PMID:27620733

  3. New metabolic pathway for degradation of 2-nitrobenzoate by Arthrobacter sp. SPG

    Science.gov (United States)

    Arora, Pankaj K.; Sharma, Ashutosh

    2015-01-01

    Arthrobacter sp. SPG utilized 2-nitrobenzoate as its sole source of carbon and energy and degraded it with accumulation of stoichiometric amounts of nitrite ions. Salicylate and catechol were detected as metabolites of the 2-nitrobenzoate degradation using high performance liquid chromatography and gas chromatography–mass spectrometry. Enzyme activities for 2-nitrobenzoate-2-monooxygenase, salicylate hydroxylase, and catechol-1,2-dioxygenase were detected in the crude extracts of the 2-nitrobenzoate-induced cells of strain SPG. The 2-nitrobenzoate-monooxygenase activity resulted in formation of salicylate and nitrite from 2-nitrobenzoate, whereas salicylate hydroxylase catalyzed the conversion of salicylate to catechol. The ring-cleaving enzyme, catechol-1,2-dioxygenase cleaved catechol to cis,cis-muconic acid. Cells of strain SPG were able to degrade 2-nitrobenzoate in sterile as well as non-sterile soil microcosms. The results of microcosm studies showed that strain SPG degraded more than 90% of 2-nitrobenzoate within 10–12 days. This study clearly shows that Arthrobacter sp. SPG degraded 2-nitrobenzoate via a new pathway with formation of salicylate and catechol as metabolites. Arthrobacter sp. SPG may be used for bioremediation of 2-nitrobenzoate-contaminated sites due to its ability to degrade 2-nitrobenzoate in soil. PMID:26082768

  4. New metabolic pathway for degradation of 2-nitrobenzoate by Arthrobacter sp. SPG

    Directory of Open Access Journals (Sweden)

    Pankaj Kumar Arora

    2015-06-01

    Full Text Available Arthrobacter sp. SPG utilized 2-nitrobenzoate as its sole source of carbon and energy and degraded it with accumulation of stoichiometric amounts of nitrite ions. Salicylate and catechol were detected as metabolites of the 2-nitrobenzoate degradation using high performance liquid chromatography and gas chromatography-mass spectrometry. Enzyme activities for 2-nitrobenzoate-2-monooxygenase, salicylate hydroxylase, and catechol-1,2-dioxygenase were detected in the crude extracts of the 2-nitrobenzoate-induced cells of strain SPG. The 2-nitrobenzoate-monooxygenase activity resulted in formation of salicylate and nitrite from 2-nitrobenzoate whereas salicylate hydroxylase catalyzed the conversion of salicylate to catechol. The ring-cleaving enzyme, catechol-1,2-dioxygenase cleaved catechol to cis, cis-muconic acid. Cells of strain SPG were able to degrade 2-nitrobenzoate in sterile as well as non-sterile soil microcosms. The results of microcosm studies showed that strain SPG degraded more than 90% of 2-nitrobenzoate within 10-12 days. This study clearly shows that Arthrobacter sp. SPG degraded 2-nitrobenzoate via a new pathway with formation of salicylate and catechol as metabolites. Arthrobacter sp. SPG may be used for bioremediation of 2-nitrobenzoate-contaminated sites due to its ability to degrade 2-nitrobenzoate in soil.

  5. Biosorption of Lead(II) by Arthrobacter sp. 25: Process Optimization and Mechanism.

    Science.gov (United States)

    Jin, Yu; Wang, Xin; Zang, Tingting; Hu, Yang; Hu, Xiaojing; Ren, Guangming; Xu, Xiuhong; Qu, Juanjuan

    2016-08-28

    In the present work, Arthrobacter sp. 25, a lead-tolerant bacterium, was assayed to remove lead(II) from aqueous solution. The biosorption process was optimized by response surface methodology (RSM) based on the Box-Behnken design. The relationships between dependent and independent variables were quantitatively determined by second-order polynomial equation and 3D response surface plots. The biosorption mechanism was explored by characterization of the biosorbent before and after biosorption using atomic force microscopy (AFM), scanning electron microscopy, energy dispersive X-ray spectroscopy, X-ray diffraction, and Fourier transform infrared spectroscopy. The results showed that the maximum adsorption capacity of 9.6 mg/g was obtained at the initial lead ion concentration of 108.79 mg/l, pH value of 5.75, and biosorbent dosage of 9.9 g/l (fresh weight), which was close to the theoretically expected value of 9.88 mg/g. Arthrobacter sp. 25 is an ellipsoidalshaped bacterium covered with extracellular polymeric substances. The biosorption mechanism involved physical adsorption and microprecipitation as well as ion exchange, and functional groups such as phosphoryl, hydroxyl, amino, amide, carbonyl, and phosphate groups played vital roles in adsorption. The results indicate that Arthrobacter sp. 25 may be potentially used as a biosorbent for low-concentration lead(II) removal from wastewater. PMID:27197671

  6. Essential and non-essential element concentrations in two sleeper shark species collected in arctic waters

    Energy Technology Data Exchange (ETDEWEB)

    McMeans, Bailey C. [Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Avenue, Windsor, ON, N9B 3P4 (Canada); Borga, Katrine [Norwegian Institute for Water Research, P.O. Box 173, Kjelsas, N-0411 Oslo (Norway); Bechtol, William R. [Alaska Department of Fish and Game, Division of Commercial Fisheries, Anchorage, AK 99518-1599 (United States); Higginbotham, David [Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602-2152 (United States); Fisk, Aaron T. [Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Avenue, Windsor, ON, N9B 3P4 (Canada)]. E-mail: afisk@uwindsor.ca

    2007-07-15

    A number of elements/metals have increased in arctic biota and are of concern due to their potential toxicity. Most studies on elements in the Arctic have focused on marine mammals and seabirds, but concentrations in the Greenland shark (Somniosus microcephalus) and Pacific sleeper shark (Somniosus pacificus), the only two shark species known to regularly inhabit arctic waters, have never been reported. To address this data gap, concentrations and patterns of 25 elements were analyzed in liver of Greenland sharks collected about Cumberland Sound (n = 24) and Pacific sleeper sharks collected about Prince William Sound (n = 14). Several non-essential elements differed between species/locations, which could suggest geographical exposure differences or ecological (e.g., diet) differences between the species. Certain essential elements also differed between the two sleeper sharks, which may indicate different physiological requirements between these closely related shark species, although information on such relationships are lacking for sharks and fish. - Patterns of essential and non-essential elements provide insight into sleeper shark biology and physiology.

  7. Species characteristics of lead in sea foods collected from coastal water of Fujian, Southeastern of China

    Science.gov (United States)

    He, Ye; Chen, Zhiqiang; Mo, Fan; Huang, Limei; Xu, Liangjun; Wu, Yongning; Xue, Zhimin; Fu, Fengfu

    2016-09-01

    Various sea foods including fish, shellfish and shrimp were collected from different coastal areas of Fujian in China, and their Pb species characteristics were investigated in detail. The results indicated that there are two different species characteristics of Pb existing in sea food samples. About half of samples were detected to have only Pb2+, and another half of samples were detected to have both Pb2+ and trimethyl lead (TML). The results also revealed that Pb species characteristics in the sea foods rather depend on the species of sea food than the sampling area. In comparison with shellfish/shrimp samples, fish samples have higher concentrations of TML and Pb2+. Especially, the average concentration of TML in the TML-detected fish samples is about 3 times of that in the TML-detected shellfish/shrimp samples, indicating that fish has stronger ability to uptake and accumulate TML. The concentrations of total lead in all samples are lower than the maximum allowable limit of national standard, suggesting that the sea foods collected from Fujian are safe for consumption. By considering that TAL has more toxicity than Pb2+, the effect of TML in sea foods on the human health should be paid more attention in the future.

  8. Molecular epidemiology and genetic diversity of Entamoeba species in a chelonian collection.

    Science.gov (United States)

    García, Gabriela; Ramos, Fernando; Pérez, Rodrigo Gutiérrez; Yañez, Jorge; Estrada, Mónica Salmerón; Mendoza, Lilian Hernández; Martinez-Hernandez, Fernando; Gaytán, Paul

    2014-02-01

    Veterinary medicine has focused recently on reptiles, due to the existence of captive collections in zoos and an increase in the acquisition of reptiles as pets. The protozoan parasite, Entamoeba can cause amoebiasis in various animal species and humans. Although amoebiasis disease is remarkably rare in most species of chelonians and crocodiles, these species may serve as Entamoeba species carriers that transmit parasites to susceptible reptile species, such as snakes and lizards, which can become sick and die. In this study, we identified the Entamoeba species in a population of healthy (disease-free) chelonians, and evaluated their diversity through the amplification and sequencing of a small subunit rDNA region. Using this procedure, three Entamoeba species were identified: Entamoeba invadens in 4.76 % of chelonians, Entamoeba moshkovskii in 3.96 % and Entamoeba terrapinae in 50 %. We did not detect mixed Entamoeba infections. Comparative analysis of the amplified region allowed us to determine the intra-species variations. The E. invadens and E. moshkovskii strains isolated in this study did not exhibit marked differences with respect to the sequences reported in GenBank. The analysis of the E. terrapinae isolates revealed three different subgroups (A, B and C). Although subgroups A and C were very similar, subgroup B showed a relatively marked difference with respect to subgroups A and C (Fst = 0.984 and Fst = 1.000, respectively; 10-14 % nucleotide variation, as determined by blast) and with respect to the sequences reported in GenBank. These results suggested that E. terrapinae subgroup B may be either in a process of speciation or belong to a different lineage. However, additional research is necessary to support this statement conclusively.

  9. Diversity and localization of bacterial endosymbionts from whitefly species collected in Brazil.

    Directory of Open Access Journals (Sweden)

    Julio Massaharu Marubayashi

    Full Text Available Whiteflies (Hemiptera: Aleyrodidae are sap-sucking insect pests, and some cause serious damage in agricultural crops by direct feeding and by transmitting plant viruses. Whiteflies maintain close associations with bacterial endosymbionts that can significantly influence their biology. All whitefly species harbor a primary endosymbiont, and a diverse array of secondary endosymbionts. In this study, we surveyed 34 whitefly populations collected from the states of Sao Paulo, Bahia, Minas Gerais and Parana in Brazil, for species identification and for infection with secondary endosymbionts. Sequencing the mitochondrial Cytochrome Oxidase I gene revealed the existence of five whitefly species: The sweetpotato whitefly Bemisia tabaci B biotype (recently termed Middle East-Asia Minor 1 or MEAM1, the greenhouse whitefly Trialeurodes vaporariorum, B. tabaci A biotype (recently termed New World 2 or NW2 collected only from Euphorbia, the Acacia whitefly Tetraleurodes acaciae and Bemisia tuberculata both were detected only on cassava. Sequencing rRNA genes showed that Hamiltonella and Rickettsia were highly prevalent in all MEAM1 populations, while Cardinium was close to fixation in only three populations. Surprisingly, some MEAM1 individuals and one NW2 population were infected with Fritschea. Arsenopnohus was the only endosymbiont detected in T. vaporariorum. In T. acaciae and B. tuberculata populations collected from cassava, Wolbachia was fixed in B. tuberculata and was highly prevalent in T. acaciae. Interestingly, while B. tuberculata was additionally infected with Arsenophonus, T. acaciae was infected with Cardinium and Fritschea. Fluorescence in situ hybridization analysis on representative individuals showed that Hamiltonella, Arsenopnohus and Fritschea were localized inside the bacteriome, Cardinium and Wolbachia exhibited dual localization patterns inside and outside the bacteriome, and Rickettsia showed strict localization outside the

  10. Diversity and localization of bacterial endosymbionts from whitefly species collected in Brazil.

    Science.gov (United States)

    Marubayashi, Julio Massaharu; Kliot, Adi; Yuki, Valdir Atsushi; Rezende, Jorge Alberto Marques; Krause-Sakate, Renate; Pavan, Marcelo Agenor; Ghanim, Murad

    2014-01-01

    Whiteflies (Hemiptera: Aleyrodidae) are sap-sucking insect pests, and some cause serious damage in agricultural crops by direct feeding and by transmitting plant viruses. Whiteflies maintain close associations with bacterial endosymbionts that can significantly influence their biology. All whitefly species harbor a primary endosymbiont, and a diverse array of secondary endosymbionts. In this study, we surveyed 34 whitefly populations collected from the states of Sao Paulo, Bahia, Minas Gerais and Parana in Brazil, for species identification and for infection with secondary endosymbionts. Sequencing the mitochondrial Cytochrome Oxidase I gene revealed the existence of five whitefly species: The sweetpotato whitefly Bemisia tabaci B biotype (recently termed Middle East-Asia Minor 1 or MEAM1), the greenhouse whitefly Trialeurodes vaporariorum, B. tabaci A biotype (recently termed New World 2 or NW2) collected only from Euphorbia, the Acacia whitefly Tetraleurodes acaciae and Bemisia tuberculata both were detected only on cassava. Sequencing rRNA genes showed that Hamiltonella and Rickettsia were highly prevalent in all MEAM1 populations, while Cardinium was close to fixation in only three populations. Surprisingly, some MEAM1 individuals and one NW2 population were infected with Fritschea. Arsenopnohus was the only endosymbiont detected in T. vaporariorum. In T. acaciae and B. tuberculata populations collected from cassava, Wolbachia was fixed in B. tuberculata and was highly prevalent in T. acaciae. Interestingly, while B. tuberculata was additionally infected with Arsenophonus, T. acaciae was infected with Cardinium and Fritschea. Fluorescence in situ hybridization analysis on representative individuals showed that Hamiltonella, Arsenopnohus and Fritschea were localized inside the bacteriome, Cardinium and Wolbachia exhibited dual localization patterns inside and outside the bacteriome, and Rickettsia showed strict localization outside the bacteriome. This study is

  11. Species of Spalangia (Hymenoptera: Pteromalidae collected from buffalo dung in Itumbiara, Goias, Brazil

    Directory of Open Access Journals (Sweden)

    Michel E. V. Milhomem

    2004-11-01

    Full Text Available This study had the objective of determining the species of Spalangia in pupae of muscoid Diptera present in buffalo dung, collected in the municipality of Itumbiara, GO, from May to December 2003. The dipterous pupae were obtained by the flotation method. They were individually placed in gelatin capsules until the emergence of the flies and/or their parasitoids. The overall prevalence of parasitism was 2.59%. The prevalences of parasitism presented by the parasitoid species Spalangia cameroni (Perkins, Spalangia drosophilae (Ashmead, Spalangia endius (Walker, Spalangia nigra (Letraille and Spalangia nigroaenea (Curtis were 0.53%, 1.37%, 0.15%, 0.04% and 0.49%, respectively.

  12. Characterization of qnrB-like genes in Citrobacter species of the American Type Culture Collection.

    Science.gov (United States)

    Saga, Tomoo; Sabtcheva, Stefana; Mitsutake, Kotaro; Ishii, Yoshikazu; Tateda, Kazuhiro; Yamaguchi, Keizo; Kaku, Mitsuo

    2013-06-01

    Among five American Type Culture Collection (ATCC) Citrobacter strains, qnrB60 in Citrobacter freundii ATCC 6879, an isolate from the preantibiotic era, and qnrB61 in Citrobacter braakii ATCC 51113(T), a type strain belonging to the C. freundii complex, were identified. Meanwhile, a truncated qnrB-like pseudogene was identified in C. freundii ATCC 8090(T) and ATCC 43864. No qnrB-like sequence was found in Citrobacter koseri ATCC 27028(T). These findings underscore the close relationship between this species and qnrB.

  13. Food collection and response to pheromones in an ant species exposed to electromagnetic radiation.

    Science.gov (United States)

    Cammaerts, Marie-Claire; Rachidi, Zoheir; Bellens, François; De Doncker, Philippe

    2013-09-01

    We used the ant species Myrmica sabuleti as a model to study the impact of electromagnetic waves on social insects' response to their pheromones and their food collection. We quantified M. sabuleti workers' response to their trail, area marking and alarm pheromone under normal conditions. Then, we quantified the same responses while under the influence of electromagnetic waves. Under such an influence, ants followed trails for only short distances, no longer arrived at marked areas and no longer orientated themselves to a source of alarm pheromone. Also when exposed to electromagnetic waves, ants became unable to return to their nest and recruit congeners; therefore, the number of ants collecting food increases only slightly and slowly. After 180 h of exposure, their colonies deteriorated. Electromagnetic radiation obviously affects social insects' behavior and physiology.

  14. The effect of the Convention on International Trade in Endangered Species on scientific collections.

    Science.gov (United States)

    Roberts, David L; Solow, Andrew R

    2008-04-22

    The Convention on International Trade in Endangered Species (CITES) was conceived in the spirit of cooperation, with the aim of ensuring that the international trade in wild animals and plants, including all parts and derivatives, did not threaten their survival. However, concerns have been raised by scientists that CITES hinders the cross-border movement of scientific specimens. To our knowledge, no empirical analysis has been undertaken to demonstrate the existence of this effect. We test for a CITES effect on the collection record of orchids from Brazil and Costa Rica using the collection records of bromeliads, which are not covered by CITES, as a control. Highly significant effects are found in both countries. PMID:18252676

  15. Regulation and function of transaldolase isoenzymes involved in sugar and one-carbon metabolism in the ribulose monophosphate cycle methylotroph Arthrobacter P1

    NARCIS (Netherlands)

    Levering, P.R.; Dijkhuizen, Lubbert

    1986-01-01

    In the facultative methylotroph Arthrobacter P1 the enzyme transaldolase plays an important role in both the pentose phosphate pathway and in the ribulose monophosphate cycle of formaldehyde fixation. Among gluconate-negative mutants of Arthrobacter P1 strains occurred which also were unable to grow

  16. On a collection of calappid crabs (Crustacea: Decapoda: Brachyura) from Fiji, with a description of a new species of Mursia.

    Science.gov (United States)

    Galil, Bella S

    2013-11-07

    Seven species of calappid crabs were identified from material collected during four IRD-MNHN expeditions conducted in 1998 and 1999 in shallow and deep waters off Fiji. Six species are reported for the first time from the islands. One new species, Mursia murimura n. sp., is described and illustrated. The new species differs from the closely related M. diwata Galil & Takeda, 2004, with which it shares a stout, distally auriculated first male pleopod, by possessing much longer lateral carapacial and cheliped spines.

  17. Hazardous impact of arsenic on tissues of same fish species collected from two ecosystem

    Energy Technology Data Exchange (ETDEWEB)

    Shah, Abdul Qadir, E-mail: aqshah07@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Kazi, Tasneem Gul, E-mail: tgkazi@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Arain, Mohammad Balal, E-mail: bilal_KU2004@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Baig, Jameel Ahmed, E-mail: jab_mughal@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Afridi, Hassan Imran, E-mail: hassanimranafridi@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Kandhro, Ghulam Abbas, E-mail: gakandhro@yahoo.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Khan, Sumaira, E-mail: skhanzai@gmail.com [National Center of Excellence in Analytical Chemistry, University of Sindh, Jamshoro 76080 (Pakistan); Jamali, Mohammad Khan, E-mail: mkhanjamali@yahoo.com [Government degree college Usta Mohammad Balochistan Pakistan (Pakistan)

    2009-08-15

    The purpose of this paper is to develop a database of fish tissues and to evaluate concentration of arsenic (As) in five tissues of fish species collected from Manchar Lake Pakistan and to compare concentration of As in fish tissues of same fish species collected from the Indus River, Pakistan. A sensitive and precise, hydride generation atomic absorption spectrometry (HG AAS) method is presented for the determination of total Arsenic (As). Microwave acid-assisted digestion (MAD) procedure based on the mixture HNO{sub 3}/H{sub 2}O{sub 2} was evaluated. The method was successfully validated against CRM DORM-2 (dogfish muscle). Quantitative As recovery in CRM (DORM-2) was obtained and no statistical differences were found at 95% level by applying the t-test. The limit of detection (LOD) and limit of quantitation (LOQ), for As were established as 0.022 and 0.063 {mu}g g{sup -1}, respectively. The results of this study indicated that As concentration in fish tissues from the Indus River are generally lower than in tissues of fishes from Manchar Lake. Arsenic concentrations in fish tissues of Indus River are although above the respective human health-based concentrations.

  18. 2,3-Dihydroxybiphenyl dioxygenase gene was first discovered in Arthrobacter sp. strain P J3

    Institute of Scientific and Technical Information of China (English)

    YANG MeiYing; MA PengDa; LI WenMing; LIU JinYing; LI Liang; ZHU XiaoJuan; WANG XingZhi

    2007-01-01

    Bacterium strain PJ3, isolated from wastewater and identified as Arthrobacter sp. bacterium based on its 16S rDNA gene, could use carbazole as the sole carbon, nitrogen and energy source. The genomic libraryof strain PJ3 was constructed and a positive clone JM109 (pUCW402) was screened out for the expression of dioxygenase by the ability to form yellow ring-fission product. A 2,3-dihydroxybiphenyl dioxygenase (23DHBD) gene of 933 bp was found in the 3360 bp exogenous fragment of pUCW402 by GenSCAN software and BLAST analysis. The phylogenetic analysis showed that 23DHBD from strain PJ3 formed a deep branch separate from a cluster containing most known 23DHBD in GenBank.Southern hybridization confirmed for the first time that the 23DHBD gene was from the genomic DNA of Arthrobacter sp. PJ3. In order to test the gene function, recombinant bacterium BL21 (pETW-8) was constructed to express 23DHBD. The expression level in BL21 (pETW-8) was highest compared with the recombinant bacteria JM109 (pUCW402) and strain PJ3. We observed that 23DHBD was not absolute specific. The enzyme activity was higher with 2,3-dihydroxybiphenyl as a substrate than with catechol.The substrate specificity assay suggested that 23DHBD was essential for cleavage of bi-cyclic aromatic compounds during the course of aromatic compound biodegradation in Arthrobacter sp. strain PJ3.

  19. Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a

    Directory of Open Access Journals (Sweden)

    Niewerth Heiko

    2012-10-01

    Full Text Available Abstract Background Bacteria of the genus Arthrobacter are ubiquitous in soil environments and can be considered as true survivalists. Arthrobacter sp. strain Rue61a is an isolate from sewage sludge able to utilize quinaldine (2-methylquinoline as sole carbon and energy source. The genome provides insight into the molecular basis of the versatility and robustness of this environmental Arthrobacter strain. Results The genome of Arthrobacter sp. Rue61a consists of a single circular chromosome of 4,736,495 bp with an average G + C content of 62.32%, the circular 231,551-bp plasmid pARUE232, and the linear 112,992-bp plasmid pARUE113 that was already published. Plasmid pARUE232 is proposed to contribute to the resistance of Arthrobacter sp. Rue61a to arsenate and Pb2+, whereas the linear plasmid confers the ability to convert quinaldine to anthranilate. Remarkably, degradation of anthranilate exclusively proceeds via a CoA-thioester pathway. Apart from quinaldine utilization, strain Rue61a has a limited set of aromatic degradation pathways, enabling the utilization of 4-hydroxy-substituted aromatic carboxylic acids, which are characteristic products of lignin depolymerization, via ortho cleavage of protocatechuate. However, 4-hydroxyphenylacetate degradation likely proceeds via meta cleavage of homoprotocatechuate. The genome of strain Rue61a contains numerous genes associated with osmoprotection, and a high number of genes coding for transporters. It encodes a broad spectrum of enzymes for the uptake and utilization of various sugars and organic nitrogen compounds. A. aurescens TC-1 is the closest sequenced relative of strain Rue61a. Conclusions The genome of Arthrobacter sp. Rue61a reflects the saprophytic lifestyle and nutritional versatility of the organism and a strong adaptive potential to environmental stress. The circular plasmid pARUE232 and the linear plasmid pARUE113 contribute to heavy metal resistance and to the ability to degrade

  20. Impact of phenolic substrate and growth temperature on the arthrobacter chlorophenolicus proteome

    Energy Technology Data Exchange (ETDEWEB)

    Unell, Maria; Abraham, Paul E.; Shah, Manesh; Zhang, Bing; Ruckert, Christian; VerBerkmoes, Nathan C.; Jansson, Janet K.

    2009-02-15

    We compared the Arthrobacter chlorophenolicus proteome during growth on 4-chlorophenol, 4-nitrophenol or phenol at 5 C and 28 C; both for the wild type and a mutant strain with mass spectrometry based proteomics. A label free workflow employing spectral counting identified 3749 proteins across all growth conditions, representing over 70% of the predicted genome and 739 of these proteins form the core proteome. Statistically significant differences were found in the proteomes of cells grown under different conditions including differentiation of hundreds of unknown proteins. The 4-chlorophenol-degradation pathway was confirmed, but not that for phenol.

  1. Improving and integrating data on invasive species collected by citizen scientists

    Science.gov (United States)

    2010-01-01

    Limited resources make it difficult to effectively document, monitor, and control invasive species across large areas, resulting in large gaps in our knowledge of current and future invasion patterns. We surveyed 128 citizen science program coordinators and interviewed 15 of them to evaluate their potential role in filling these gaps. Many programs collect data on invasive species and are willing to contribute these data to public databases. Although resources for education and monitoring are readily available, groups generally lack tools to manage and analyze data. Potential users of these data also retain concerns over data quality. We discuss how to address these concerns about citizen scientist data and programs while preserving the advantages they afford. A unified yet flexible national citizen science program aimed at tracking invasive species location, abundance, and control efforts could be designed using centralized data sharing and management tools. Such a system could meet the needs of multiple stakeholders while allowing efficiencies of scale, greater standardization of methods, and improved data quality testing and sharing. Finally, we present a prototype for such a system (see www.citsci.org).

  2. Molecular detection of Rickettsia species in Amblyomma ticks collected from snakes in Thailand.

    Science.gov (United States)

    Sumrandee, Chalao; Hirunkanokpun, Supanee; Doornbos, Kathryn; Kitthawee, Sangvorn; Baimai, Visut; Grubhoffer, Libor; Trinachartvanit, Wachareeporn; Ahantarig, Arunee

    2014-10-01

    Some reptile ticks are potential vectors of pathogens such as spotted fever group (SFG) rickettsiae. Here, we report for the first time in detail the molecular evidence, DNA sequences and phylogenetic studies, for the presence of Rickettsia spp. in Amblyomma ticks (Amblyomma helvolum and Amblyomma varanense) from snakes in Thailand. A total of 24 tick samples was collected from 4 snake species and identified. A phylogenetic analysis inferred from the partial sequences of the gltA gene indicated that the Rickettsia spp. from 2 Amblyomma helvolum and 1 Amblyomma varanense belong to the same group as the SFG rickettsiae, which are closely related to Rickettsia raoultii strains. In contrast, there was 1 Rickettsia sp. from Amblyomma helvolum grouped into the same clade with other SFG rickettsiae (Rickettsia tamurae, Rickettsia monacensis, and a Rickettsia endosymbiont of Amblyomma dubitatum from Brazil). However, another Rickettsia sp. from Amblyomma varanense was closely related to Rickettsia bellii and Rickettsia sp. strain RDa420 from Thailand. In addition, from phylogenetic results based on the 16S rRNA gene and a concatenated tree of the 3 genes (gltA, ompA, and ompB), we found what may be a novel SFG rickettsia species closely related to Rickettsia raoultii (from both Amblyomma varanense and Amblyomma helvolum). In conclusion, our findings are the first report on the presence of novel SFG rickettsiae in 2 snake tick species, Amblyomma varanense and Amblyomma helvolum in Thailand and in south-eastern Asia.

  3. Accumulation of rare earth elements by siderophore-forming Arthrobacter luteolus isolated from rare earth environment of Chavara, India

    Indian Academy of Sciences (India)

    E S Challaraj Emmanuel; T Ananthi; B Anandkumar; S Maruthamuthu

    2012-03-01

    In this study, Arthrobacter luteolus, isolated from rare earth environment of Chavara (Quilon district, Kerala, India), were found to produce catechol-type siderophores. The bacterial strain accumulated rare earth elements such as samarium and scandium. The siderophores may play a role in the accumulation of rare earth elements. Catecholate siderophore and low-molecular-weight organic acids were found to be present in experiments with Arthrobacter luteolus. The influence of siderophore on the accumulation of rare earth elements by bacteria has been extensively discussed.

  4. Diversity Driven Coexistence: Collective Stability in the Cyclic Competition of Three Species

    Science.gov (United States)

    Bassler, Kevin E.; Frey, Erwin; Zia, R. K. P.

    2015-03-01

    The basic physics of collective behavior are often difficult to quantify and understand, particularly when the system is driven out of equilibrium. Many complex systems are usefully described as complex networks, consisting of nodes and links. The nodes specify individual components of the system and the links describe their interactions. When both nodes and links change dynamically, or `co-evolve', as happens in many realistic systems, complex mathematical structures are encountered, posing challenges to our understanding. In this context, we introduce a minimal system of node and link degrees of freedom, co-evolving with stochastic rules. Specifically, we show that diversity of social temperament (intro- or extroversion) can produce collective stable coexistence when three species compete cyclically. It is well-known that when only extroverts exist in a stochastic rock-paper-scissors game, or in a conserved predator-prey, Lotka-Volterra system, extinction occurs at times of O(N), where N is the number of nodes. We find that when both introverts and extroverts exist, where introverts sever social interactions and extroverts create them, collective coexistence prevails in long-living, quasi-stationary states. Work supported by the NSF through Grants DMR-1206839 (KEB) and DMR-1244666 (RKPZ), and by the AFOSR and DARPA through Grant FA9550-12-1-0405 (KEB).

  5. Heavy metal resistance in Arthrobacter ramosus strain G2 isolated from mercuric salt-contaminated soil

    International Nuclear Information System (INIS)

    Present study describes isolation of a multiple metal-resistant Arthrobacter ramosus strain from mercuric salt-contaminated soil. The isolate was found to resist and bioaccumulate several metals, such as cadmium, cobalt, zinc, chromium and mercury. Maximum tolerated concentrations for above metals were found to be 37, 525, 348, 1530 and 369 μM, respectively. The isolate could also reduce and detoxify redox-active metals like chromium and mercury, indicating that it has great potential in bioremediation of heavy metal-contaminated sites. Chromate reductase and mercuric reductase (MerA) activities in protein extract of the culture were found to be 2.3 and 0.17 units mg-1 protein, respectively. MerA enzyme was isolated from the culture by (NH4)2SO4 precipitation followed by dye affinity chromatography and its identity was confirmed by nano-LC-MS/MS. Its monomeric molecular weight, and optimum pH and temperature were 57 kDa, 7.4 and 55 deg. C, respectively. Thus, the enzyme was mildly thermophilic as compared to other MerA enzymes. Km and Vmax of the enzyme were 16.9 μM HgCl2 and 6.2 μmol min-1 mg-1 enzyme, respectively. The enzyme was found to be NADPH-specific. To our knowledge this is the first report on characterization of MerA enzyme from an Arthrobacter sp.

  6. Isolation of Indole Utilizing Bacteria Arthrobacter sp. and Alcaligenes sp. From Livestock Waste.

    Science.gov (United States)

    Kim, Minsu; Lee, Jin-Hyung; Kim, Eonmi; Choi, Hyukjae; Kim, Younghoon; Lee, Jintae

    2016-06-01

    Indole is an interspecies and interkingdom signaling molecule widespread in different environmental compartment. Although multifaceted roles of indole in different biological systems have been established, little information is available on the microbial utilization of indole in the context of combating odor emissions from different types of waste. The present study was aimed at identifying novel bacteria capable of utilizing indole as the sole carbon and energy source. From the selective enrichment of swine waste and cattle feces, we identified Gram-positive and Gram-negative bacteria belonging to the genera Arthrobacter and Alcaligenes. Bacteria belonging to the genus Alcaligenes showed higher rates of indole utilization than Arthrobacter. Indole at 1.0 mM for growth was completely utilized by Alcaligenes sp. in 16 h. Both strains produced two intermediates, anthranilic acid and isatin, during aerobic indole metabolism. These isolates were also able to grow on several indole derivatives. Interestingly, an adaptive response in terms of a decrease in cell size was observed in both strains in the presence of indole. The present study will help to explain the degradation of indole by different bacteria and also the pathways through which it is catabolized. Furthermore, these novel bacterial isolates could be potentially useful for the in situ attenuation of odorant indole and its derivatives emitted from different types of livestock waste. PMID:27570307

  7. Genetic differentiation of Arthrobacter population from heavy metal-contaminated environment

    Institute of Scientific and Technical Information of China (English)

    ZHANG Hanbo; REN Weimin; SHAO Qiyong; DUAN Changqun

    2007-01-01

    Six samples containing extremely high concentration of Pb,Zn,and Cd were obtained from the layers of 5-10 cm and 25-30 cm three tailing piles,with ages of about 10,20 and more than 80 years,respectively.Then,48 bacterial strains were obtained from these samples,and subsequently their phylogenetic positions were determined by analysis on the partial sequence of 16S rRNA gene (fragment length ranging from 474 to 708 bp).These isolates were members of the Arthrobacter genus,phylogenetically close to A.keyseri and A.ureafaciens,with sequence ranging from 99.1%to 100%.Furthermore,genetic variation between subpopulations from different samples was revealed by analysis on their randomly amplified polymorphic DNA profile.Nei genetic distance showed that the greatest differentiation occurred between subpopulation A and C.Notably,either genetic distance between subpopulations from the layers of 5-10 cm and 25-30 cm of each tailing pile or between same layers of different tailing pile increased with the history of tailings.Moreover,correlation analysis showed that soluble Pb has a significantly negative relationship with Nei'gene diversity of subpopulation.It was assumed that soluble Pb may be responsible for the reduced genetic diversity of the Arthrobacter population.Our data provided evidence that genetic differentiation of microbial populations was consistent with the changes of environmental factors,particularly heavy metals.

  8. Parasites of domestic and wild animals in South Africa. XLIV. Fleas (Insecta : Siphonaptera : Pulicidae collected from 15 carnivore species

    Directory of Open Access Journals (Sweden)

    I.G. Horak

    2004-11-01

    Full Text Available Fleas were collected from 61 wild carnivores belonging to 13 species in various nature reserves and on farms, two feral domestic cats in a nature reserve and a domestic dog in the city of Johannesburg. Eleven flea species, including two subspecies of one of these, belonging to six genera were recovered. Amongst these only Ctenocephalides felis felis and Ctenocephalides felis strongylus are considered specific parasites of carnivores. The remaining ten species normally infest the prey animals of the various carnivores.

  9. Hepatozoon and Theileria species detected in ticks collected from mammals and snakes in Thailand.

    Science.gov (United States)

    Sumrandee, Chalao; Baimai, Visut; Trinachartvanit, Wachareeporn; Ahantarig, Arunee

    2015-04-01

    We report the detection of Hepatozoon and Theileria in 103 ticks from mammals and snakes in Thailand. By using a genus-specific 18S rRNA PCR, Hepatozoon and Theileria spp. were detected in 8% and 18%, respectively, of ticks (n=79) removed from mammals. Of the ticks removed from snakes (n=24), 96% were infected with Hepatozoon spp., but none were infected with Theileria. Phylogenetic analysis revealed that Hepatozoon spp. detected from Dermacentor astrosignatus and Dermacentor auratus ticks from Wild boar (Sus scrofa) formed a phylogenetic group with many isolates of Hepatozoon felis that were distantly related to a species group containing Hepatozoon canis and Hepatozoon americanum. In contrast, a phylogenetic analysis of the Hepatozoon sequences of snake ticks revealed that Hepatozoon spp. from Amblyomma varanense from King cobra (Ophiophagus hannah) and Amblyomma helvolum ticks from Indochinese rat snake (Ptyas korros), and Asiatic water snake (Xenochrophis piscator) are grouped with Hepatozoon spp. recently isolated from Monocellate cobras, Reticulated pythons and Burmese pythons, all of Thai origin, and with Hepatozoon sp. 774c that has been detected from a tick species obtained from Argus monitors in Australia. A phylogenetic analysis demonstrated that Theileria spp. from Rhipicephalus (Boophilus) microplus, Haemaphysalis obesa, and Haemaphysalis lagrangei ticks from Sambar deer (Cervus unicolor) cluster with the Theileria cervi isolates WU11 and 239, and Theileria sp. Iwate 141. We report for the first time a Hepatozoon species that shares genetic similarity with Hepatozoon felis found in Dermacentor astrosignatus and Dermacentor auratus ticks collected from Wild boars in Thailand. In addition, we found the presence of a Theileria cervi-like sp. which suggests the potential role of Haemaphysalis lagrangei as a Theileria vector in Thailand.

  10. Prevalence of Anaplasma, Bartonella and Borrelia Species in Haemaphysalis longicornis collected from goats in North Korea.

    Science.gov (United States)

    Kang, Jun-Gu; Ko, Sungjin; Smith, W Barney; Kim, Heung-Chul; Lee, In-Yong; Chae, Joon-Seok

    2016-06-30

    North Korea is located on the northern part of the Korean Peninsula in East Asia. While tick-borne pathogens of medical and veterinary importance have been reported from China and South Korea, they have not been reported from North Korea. To screen for zoonotic tick-borne pathogens in North Korea, ticks were collected from domestic goats. A total of 292 (27 nymph, 26 male, 239 female) Haemaphysalis (H.) longicornis were collected and assayed individually for selected tick-borne pathogens. A total of 77 (26.4%) were positive for Anaplasma bovis, followed by Bartonella (B.) grahamii (15, 5.1%), Anaplasma phagocytophilum (12, 4.1%), Bartonella henselae (10, 3.4%), and Borrelia spp. (3, 1.0%) based on 16S ribosomal RNA and ITS species-specific nested polymerase chain reaction. Using the groEL-based nested PCR, a total of 6 and 1 H. longicornis were positive for B. grahamii and B. henselae, respectively. All products were sequenced and demonstrated 100% identity and homology with previously reported sequences from other countries in GenBank. This is the first report of the detection of tick-borne pathogens in the North Korea and suggests that farm animals may act as reservoirs for zoonotic tick-borne pathogens. PMID:26645342

  11. One-pot conversion of levan prepared from Serratia levanicum NN to difructose anhydride IV by Arthrobacter nicotinovorans levan fructotransferase.

    Science.gov (United States)

    Kikuchi, Hiroto; Sakurai, Hiroaki; Nagura, Taizo; Aritsuka, Tsutomu; Tomita, Fusao; Yokota, Atsushi

    2010-03-01

    The newly established difructose anhydride IV (DFA IV) production system is comprised of the effective production of levan from sucrose by Serratia levanicum NN, the conversion of the levan into DFA IV by levan fructotransferase from Arthrobacter nicotinovorans GS-9, which is highly expressed in an Escherichiacoli transformant, and a practical purification step. The chemical properties of DFA IV were also investigated. PMID:20159571

  12. Growth of Arthrobacter sp. strain JBH1 on nitroglycerin as the sole source of carbon and nitrogen.

    Science.gov (United States)

    Husserl, Johana; Spain, Jim C; Hughes, Joseph B

    2010-03-01

    Arthrobacter sp. strain JBH1 was isolated from nitroglycerin-contaminated soil by selective enrichment. Detection of transient intermediates and simultaneous adaptation studies with potential intermediates indicated that the degradation pathway involves the conversion of nitroglycerin to glycerol via 1,2-dinitroglycerin and 1-mononitroglycerin, with concomitant release of nitrite. Glycerol then serves as the source of carbon and energy.

  13. Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds

    NARCIS (Netherlands)

    Scheublin, T.R.; Deusch, S.; Moreno-Forero, S.K.; Müller, J.A.; van der Meer, J.R.; Leveau, J.H.J.

    2014-01-01

    Arthrobacter chlorophenolicus A6 is a Gram-positive, 4-chlorophenol degrading soil bacterium that was recently shown to be an effective colonizer of plant leaf surfaces. The genetic basis for this phyllosphere competency is unknown. In this paper, we describe the genome-wide expression profile of A.

  14. Nitrogen metabolism in the facultative methylotroph Arthrobacter P1 grown with various amines or ammonia as nitrogen sources

    NARCIS (Netherlands)

    de Boer, L.; Brouwer, J.W.; Hassel, C.W. van; Levering, Pieter; Dijkhuizen, L.

    1989-01-01

    The metabolism of trimethylamine (TMA) and dimethylamine (DMA) in Arthrobacter P1 involved the enzymes TMA monooxygenase and trimethylamine-N-oxide (TMA-NO) demethylase, and DMA monooxygenase, respectively. The methylamine and formaldehyde produced were further metabolized via a primary amine oxidas

  15. Draft Genome Sequence of a Papaverine-Degrading, Gram-positive Arthrobacter sp., Isolated from Soil Near Hohenheim, Germany

    OpenAIRE

    Reznicek, Ondrej; Facey, Sandra J; Hauer, Bernhard

    2015-01-01

    We present the 4.8-Mb draft genome of a soil bacterium identified as Arthrobacter sp. This Gram-positive soil bacterium is able to use the aromatic compound papaverine as sole carbon source and will be examined for novel oxygenases.

  16. Increased iron-stress resilience of maize through inoculation of siderophore-producing Arthrobacter globiformis from mine.

    Science.gov (United States)

    Sharma, Meenakshi; Mishra, Vandana; Rau, Nupur; Sharma, Radhey Shyam

    2016-07-01

    Iron deficiency is common among graminaceous crops. Ecologically successful wild grasses from iron-limiting habitats are likely to harbour bacteria which secrete efficient high-affinity iron-chelating molecules (siderophores) to solubilize and mobilize iron. Such siderophore-producing rhizobacteria may increase the iron-stress resilience of graminaceous crops. Considering this, 51 rhizobacterial isolates of Dichanthium annulatum from iron-limiting abandoned mine (∼84% biologically unavailable iron) were purified and tested for siderophore production; and efficacy of Arthrobacter globiformis inoculation to increase iron-stress resilience of maize and wheat was also evaluated. 16S rRNA sequence analyses demonstrated that siderophore-producing bacteria were taxonomically diverse (seven genera, nineteen species). Among these, Gram-positive Bacillus (eleven species) was prevalent (76.92%). A. globiformis, a commonly found rhizobacterium of graminaceous crops was investigated in detail. Its siderophore has high iron-chelation capacity (ICC: 13.0 ± 2.4 μM) and effectively dissolutes diverse iron-complexes (FeCl3 : 256.13 ± 26.56 μM/ml; Fe2 O3 red: 84.3 ± 4.74 μM/ml; mine spoil: 123.84 ± 4.38 μM/ml). Siderophore production (ICC) of A. globiformis BGDa404 also varied with supplementation of different iron complexes. In plant bioassay with iron-deficiency sensitive species maize, A. globiformis inoculation triggered stress-associated traits (peroxidase and proline) in roots, enhanced plant biomass, uptake of iron and phosphate, and protein and chlorophyll contents. However, in iron deficiency tolerant species wheat, growth improvement was marginal. The present study illustrates: (i) rhizosphere of D. annulatum colonizing abandoned mine as a "hotspot" of siderophore-producing bacteria; and (ii) potential of A. globiformis BGDa404 inoculation to increase iron-stress resilience in maize. A. globiformis BGDa404 has the potential to develop as

  17. Informing species conservation at multiple scales using data collected for marine mammal stock assessments.

    Directory of Open Access Journals (Sweden)

    Alana Grech

    Full Text Available BACKGROUND: Conservation planning and the design of marine protected areas (MPAs requires spatially explicit information on the distribution of ecological features. Most species of marine mammals range over large areas and across multiple planning regions. The spatial distributions of marine mammals are difficult to predict using habitat modelling at ecological scales because of insufficient understanding of their habitat needs, however, relevant information may be available from surveys conducted to inform mandatory stock assessments. METHODOLOGY AND RESULTS: We use a 20-year time series of systematic aerial surveys of dugong (Dugong dugong abundance to create spatially-explicit models of dugong distribution and relative density at the scale of the coastal waters of northeast Australia (∼136,000 km(2. We interpolated the corrected data at the scale of 2 km * 2 km planning units using geostatistics. Planning units were classified as low, medium, high and very high dugong density on the basis of the relative density of dugongs estimated from the models and a frequency analysis. Torres Strait was identified as the most significant dugong habitat in northeast Australia and the most globally significant habitat known for any member of the Order Sirenia. The models are used by local, State and Federal agencies to inform management decisions related to the Indigenous harvest of dugongs, gill-net fisheries and Australia's National Representative System of Marine Protected Areas. CONCLUSION/SIGNIFICANCE: In this paper we demonstrate that spatially-explicit population models add value to data collected for stock assessments, provide a robust alternative to predictive habitat distribution models, and inform species conservation at multiple scales.

  18. 78 FR 77705 - Proposed Agency Information Collection Activity: Nonindigenous Aquatic Species Sighting Reporting...

    Science.gov (United States)

    2013-12-24

    ... health-related costs of invasive species exceed those of all other natural disasters combined. Through... important role in federal efforts to combat invasive species in natural and semi-natural areas through early... nonindigenous species are now established in the United States, posing risks to native species,...

  19. Biofilm inhibition activity of compounds isolated from two Eunicea species collected at the Caribbean Sea

    Directory of Open Access Journals (Sweden)

    Yenny Martínez Díaz

    2015-12-01

    Full Text Available Abstract Biofilm has a primary role in the pathogenesis of diseases and in the attachment of multicellular organisms to a fouled surface. Because of that, the control of bacterial biofilms has been identified as an important target. In the present study, five lipid compounds isolated from soft coral Eunicea sp. and three terpenoids together with a mixture of sterols from Eunicea fusca collected at the Colombian Caribbean Sea showed different effectiveness against biofilm formation by three marine bacteria associated with immersed fouled surfaces, Ochrobactrum pseudogringnonense,Alteromona macleodii and Vibrio harveyi, and against two known biofilm forming bacteria, Pseudomonas aeruginosa ATCC 27853 and Staphylococcus aureus ATCC 25923. The pure compounds were characterized by NMR, HRESI-MS, HRGC-MS and optical rotation. The most effective compounds were batyl alcohol (1 and fuscoside E peracetate (6, acting against four strains without affecting their microbial growth. Compound 1 showed biofilm inhibition greater than 30% against A. macleodii, and up to 60% against O. pseudogringnonense,V. harveyi and S. aureus. Compound 6 inhibited O. pseudogringnonense and V. harveyi between 25 and 50%, and P. aeruginosa or S. aureus up to 60% at 0.5 mg/ml. The results suggest that these compounds exhibit specific biofilm inhibition with lower antimicrobial effect against the bacterial species assayed.

  20. Biodegradation of p-nitrophenol via 1,2,4-benzenetriol by an Arthrobacter sp.

    Energy Technology Data Exchange (ETDEWEB)

    Jain, R.K.; Spain, J.C. [Armstrong Lab., Tyndall Air Force Base, FL (United States); Dreisbach, J.H. [Univ. of Scranton, PA (United States)

    1994-08-01

    The degradation of p-nitrophenol (PNP) by Moraxella and Pseudomonas spp. involves an initial monooxygenase-catalyzed removal of the nitro group. The resultant hydroquinone is subject to ring fission catalyzed by a dioxygenase enzyme. A strain of an Arthrobacter sp. JS443, capable of degrading PNP with stoichiometric release of nitrite has been isolated. During induction of the enzymes required for growth on PNP, 1,2,4-benzenetriol was identified as an intermediate by gas chromatography-mass spectroscopy and radiotracer studies. 1,2,4-Benzenetriol was converted to maleylacetic acid, which was further degraded by the beta-ketoadipate pathway. Conversion of PNP to 1,2,4-benzenetriol is catalyzed by a monooxygenase system in strain JS443 through the formation of 4-nitrocatechol, 4-nitroresorcinol, or both. Results clearly indicate the existence of an alternative pathway for the biodegradation of PNP. 15 refs, 2 figs., 2 tabs.

  1. Taxonomy of Atlantic Central African orchids 2. A second species of the rare genus Distylodon (Orchidaceae, Angraecinae) collected in Cameroon

    OpenAIRE

    Vincent Droissart; Cribb,Phillip J.; Murielle Simo-Droissart; Tariq Stévart

    2014-01-01

    While conducting field inventories in South Cameroon, we collected two specimens of a new species that we considered to belong to the genus Angraecopsis. Afterwards, a careful examination of specimens housed at main herbaria, along with the nomenclatural types, allows us to place it in Distylodon, a monotypic genus previously known from East Africa. Distylodon sonkeanum Droissart, Stévart & P.J.Cribb, sp. nov. was collected in the lowland coastal forest of Atlantic Central Africa. ...

  2. California dragonfly and damselfly (Odonata) database: temporal and spatial distribution of species records collected over the past century

    OpenAIRE

    Ball-Damerow, Joan E.; Oboyski, Peter T.; Resh, Vincent H

    2015-01-01

    Abstract The recently completed Odonata database for California consists of specimen records from the major entomology collections of the state, large Odonata collections outside of the state, previous literature, historical and recent field surveys, and from enthusiast group observations. The database includes 32,025 total records and 19,000 unique records for 106 species of dragonflies and damselflies, with records spanning 1879–2013. Records have been geographically referenced using the po...

  3. Distribution of Brown Blotch Bacteria in Wild and Cultivated Species of Basidiomycetes

    OpenAIRE

    Bessette, Alan E.

    1984-01-01

    Wild and cultivated Basidiomycetes species were cultured to determine the distribution of bacteria causing brown blotch disease of Agaricus bisporus. Colonies from each basidiocarp were screened for brown blotch organisms by the white line and host pathogenicity tests. Isolates causing brown blotch were identified as Pseudomonas tolaasi and an Arthrobacter species.

  4. Molecular Detection of Rickettsia Species Within Ticks (Acari: Ixodidae) Collected from Arkansas United States.

    Science.gov (United States)

    Trout Fryxell, R T; Steelman, C D; Szalanski, A L; Billingsley, P M; Williamson, P C

    2015-05-01

    Rocky Mountain spotted fever (RMSF), caused by the etiological agent Rickettsia rickettsii, is the most severe and frequently reported rickettsial illness in the United States, and is commonly diagnosed throughout the southeast. With the discoveries of Rickettsia parkeri and other spotted fever group rickettsiae (SFGR) in ticks, it remains inconclusive if the cases reported as RMSF are truly caused by R. rickettsii or other SFGR. Arkansas reports one of the highest incidence rates of RMSF in the country; consequently, to identify the rickettsiae in Arkansas, 1,731 ticks, 250 white-tailed deer, and 189 canines were screened by polymerase chain reaction (PCR) for the rickettsial genes gltA, rompB, and ompA. None of the white-tailed deer were positive, while two of the canines (1.1%) and 502 (29.0%) of the ticks were PCR positive. Five different tick species were PCR positive: 244 (37%) Amblyomma americanum L., 130 (38%) Ixodes scapularis Say, 65 (39%) Amblyomma maculatum (Koch), 30 (9%) Rhipicephalus sanguineus Latreille, 7 (4%) Dermacentor variabilis Say, and 26 (44%) unidentified Amblyomma ticks. None of the sequenced products were homologous to R. rickettsii. The most common Rickettsia via rompB amplification was Rickettsia montanensis and nonpathogenic Candidatus Rickettsia amblyommii, whereas with ompA amplification the most common Rickettsia was Ca. R. amblyommii. Many tick specimens collected in northwest Arkansas were PCR positive and these were commonly A. americanum harboring Ca. R. amblyommii, a currently nonpathogenic Rickettsia. Data reported here indicate that pathogenic R. rickettsii was absent from these ticks and suggest by extension that other SFGR are likely the causative agents for Arkansas diagnosed RMSF cases.

  5. Antibacterial Activity of Extracts of Three Croton Species Collected in Mpumalanga Region in South Africa

    OpenAIRE

    Selowa, SC; Shai, LJ; Masoko, P; Mokgotho, MP; Magano, SR

    2009-01-01

    The antibacterial activities of three Croton species were compared using bioautography and the serial microdilution methods. The methanolic extracts of all the species had low activity against Escherichia coli. The highest activity was observed with Croton megalobotrys against Enterococcus faecalis with a minimal inhibitory concentration (MIC) value of 0.02 mg/ml. Croton steenkapianus extracts were the least active of the species investigated, only managing an MIC value of 0.625 mg/ml against...

  6. Purification and characterization of alpha-L-arabinofuranosidase from Arthrobacter sp. MTCC 5214 in solid-state fermentation

    Digital Repository Service at National Institute of Oceanography (India)

    Khandeparker, R.; Numan, M.T.H.; Mukherjee, B.; Satwekar, A.; Bhosle, N.B.

    protein following the method of bicinchoninic acid with bovine serum albumin as the standard [27]. The protein content of the chromatographic eluents was measured by monitoring the absorbance at 280 nm. 2.6. Preparation of enzyme Erlenmeyer flask (500 ml... cellulose [31] and Aspergillus kawachii [32]. This may indicate the constitutive nature of a-L-AFase production in Arthrobacter sp. 3.2. Growth and enzyme production Aswheatbraninducesoptimalexpressionofa-L-AFaseinSSF,it was used for further studies...

  7. Application of zeolite-Arthrobacter viscosus system for the removal of heavy metal and dye : chromium and azure B

    OpenAIRE

    Rosales, E.; Pazos, M.; Sanromán, M. A.; Tavares, M. T.

    2012-01-01

    A hybrid system combining the ion-exchange properties of a NaY zeolite and the characteristics of the bacterium Arthrobacter viscosus was investigated to treat polluted effluents with dye and toxic metals. In this study, the dye and the metal ion employed were a thiazine dye, Azure B, and chromium (VI), respectively. Initially, the removal of dye by the zeolite was tested. The analysis of dye equilibrium isotherms data was done using Langmuir, Freundlich, Sips and Redlich–Peterson models. Red...

  8. A new species of Euchirella (fam. Aetideidae) from the "Dana"-collections (Copepoda, Calanoida)

    NARCIS (Netherlands)

    Vaupel-Klein, von J.C.

    1980-01-01

    SUMMARY Euchirella paulinae spec. nov. is described and illustrated in extenso ; various structures are outlined in detail for the first time. The external morphology of the new species is discussed with reference to the other species of the genus. Some brief remarks are made about the anatomical te

  9. Robustness and accuracy of Maxent niche modelling for Lactuca species distributions in light of collecting expeditions

    NARCIS (Netherlands)

    Cobben, M.M.P.; Treuren, van R.; Castaneda-Alvarez, N.P.; Khoury, C.K.; Kik, C.; Hintum, van T.J.L.

    2015-01-01

    Niche modelling software can be used to assess the probability of detecting a population of a plant species at a certain location. In this study, we used the distribution of the wild relatives of lettuce (Lactuca spp.) to investigate the applicability of Maxent species distribution models for collec

  10. A collection of Australian Drosophila datasets on climate adaptation and species distributions.

    Science.gov (United States)

    Hangartner, Sandra B; Hoffmann, Ary A; Smith, Ailie; Griffin, Philippa C

    2015-11-24

    The Australian Drosophila Ecology and Evolution Resource (ADEER) collates Australian datasets on drosophilid flies, which are aimed at investigating questions around climate adaptation, species distribution limits and population genetics. Australian drosophilid species are diverse in climatic tolerance, geographic distribution and behaviour. Many species are restricted to the tropics, a few are temperate specialists, and some have broad distributions across climatic regions. Whereas some species show adaptability to climate changes through genetic and plastic changes, other species have limited adaptive capacity. This knowledge has been used to identify traits and genetic polymorphisms involved in climate change adaptation and build predictive models of responses to climate change. ADEER brings together 103 datasets from 39 studies published between 1982-2013 in a single online resource. All datasets can be downloaded freely in full, along with maps and other visualisations. These historical datasets are preserved for future studies, which will be especially useful for assessing climate-related changes over time.

  11. Low temperature reduction of hexavalent chromium by a microbial enrichment consortium and a novel strain of Arthrobacter aurescens

    Directory of Open Access Journals (Sweden)

    Thompson Vicki S

    2006-01-01

    Full Text Available Abstract Background Chromium is a transition metal most commonly found in the environment in its trivalent [Cr(III] and hexavalent [Cr(VI] forms. The EPA maximum total chromium contaminant level for drinking water is 0.1 mg/l (0.1 ppm. Many water sources, especially underground sources, are at low temperatures (less than or equal to 15 Centigrade year round. It is important to evaluate the possibility of microbial remediation of Cr(VI contamination using microorganisms adapted to these low temperatures (psychrophiles. Results Core samples obtained from a Cr(VI contaminated aquifer at the Hanford facility in Washington were enriched in Vogel Bonner medium at 10 Centigrade with 0, 25, 50, 100, 200, 400 and 1000 mg/l Cr(VI. The extent of Cr(VI reduction was evaluated using the diphenyl carbazide assay. Resistance to Cr(VI up to and including 1000 mg/l Cr(VI was observed in the consortium experiments. Reduction was slow or not observed at and above 100 mg/l Cr(VI using the enrichment consortium. Average time to complete reduction of Cr(VI in the 30 and 60 mg/l Cr(VI cultures of the consortium was 8 and 17 days, respectively at 10 Centigrade. Lyophilized consortium cells did not demonstrate adsorption of Cr(VI over a 24 hour period. Successful isolation of a Cr(VI reducing organism (designated P4 from the consortium was confirmed by 16S rDNA amplification and sequencing. Average time to complete reduction of Cr(VI at 10 Centigrade in the 25 and 50 mg/l Cr(VI cultures of the isolate P4 was 3 and 5 days, respectively. The 16S rDNA sequence from isolate P4 identified this organism as a strain of Arthrobacter aurescens, a species that has not previously been shown to be capable of low temperature Cr(VI reduction. Conclusion A. aurescens, indigenous to the subsurface, has the potential to be a predominant metal reducer in enhanced, in situ subsurface bioremediation efforts involving Cr(VI and possibly other heavy metals and radionuclides.

  12. Sapphire: a better material for atomization and in situ collection of silver volatile species for atomic absorption spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Musil, Stanislav, E-mail: stanomusil@biomed.cas.cz; Matoušek, Tomáš; Dědina, Jiří

    2015-06-01

    Sapphire is presented as a high temperature and corrosion resistant material of an optical tube of an atomizer for volatile species of Ag generated by the reaction with NaBH{sub 4}. The modular atomizer design was employed which allowed to carry out the measurements in two modes: (i) on-line atomization and (ii) in situ collection (directly in the optical tube) by means of excess of O{sub 2} over H{sub 2} in the carrier gas during the trapping step and vice versa in the volatilization step. In comparison with quartz atomizers, the sapphire tube atomizer provides a significantly increased atomizer lifetime as well as substantially improved repeatability of the Ag in situ collection signals shapes. In situ collection of Ag in the sapphire tube atomizer was highly efficient (> 90%). Limit of detection in the on-line atomization mode and in situ collection mode, respectively, was 1.2 ng ml{sup −1} and 0.15 ng ml{sup −1}. - Highlights: • Sapphire was tested as a new material of an atomizer tube for Ag volatile species. • Two measurement modes were investigated: on-line atomization and in situ collection. • In situ collection of Ag was highly efficient (> 90%) with LOD of 0.15 ng ml{sup −1}. • No devitrification of the sapphire tube observed in the course of several months.

  13. s-triazine degrading bacterial isolate Arthrobacter sp. AK-YN10, a candidate for bioaugmentation of atrazine contaminated soil.

    Science.gov (United States)

    Sagarkar, Sneha; Bhardwaj, Pooja; Storck, Veronika; Devers-Lamrani, Marion; Martin-Laurent, Fabrice; Kapley, Atya

    2016-01-01

    The Arthrobacter sp. strain AK-YN10 is an s-triazine pesticide degrading bacterium isolated from a sugarcane field in Central India with history of repeated atrazine use. AK-YN10 was shown to degrade 99 % of atrazine in 30 h from media supplemented with 1000 mg L(-1) of the herbicide. Draft genome sequencing revealed similarity to pAO1, TC1, and TC2 catabolic plasmids of the Arthrobacter taxon. Plasmid profiling analyses revealed the presence of four catabolic plasmids. The trzN, atzB, and atzC atrazine-degrading genes were located on a plasmid of approximately 113 kb.The flagellar operon found in the AK-YN10 draft genome suggests motility, an interesting trait for a bioremediation agent, and was homologous to that of Arthrobacter chlorophenolicus. The multiple s-triazines degradation property of this isolate makes it a good candidate for bioremediation of soils contaminated by s-triazine pesticides. PMID:26403923

  14. s-triazine degrading bacterial isolate Arthrobacter sp. AK-YN10, a candidate for bioaugmentation of atrazine contaminated soil.

    Science.gov (United States)

    Sagarkar, Sneha; Bhardwaj, Pooja; Storck, Veronika; Devers-Lamrani, Marion; Martin-Laurent, Fabrice; Kapley, Atya

    2016-01-01

    The Arthrobacter sp. strain AK-YN10 is an s-triazine pesticide degrading bacterium isolated from a sugarcane field in Central India with history of repeated atrazine use. AK-YN10 was shown to degrade 99 % of atrazine in 30 h from media supplemented with 1000 mg L(-1) of the herbicide. Draft genome sequencing revealed similarity to pAO1, TC1, and TC2 catabolic plasmids of the Arthrobacter taxon. Plasmid profiling analyses revealed the presence of four catabolic plasmids. The trzN, atzB, and atzC atrazine-degrading genes were located on a plasmid of approximately 113 kb.The flagellar operon found in the AK-YN10 draft genome suggests motility, an interesting trait for a bioremediation agent, and was homologous to that of Arthrobacter chlorophenolicus. The multiple s-triazines degradation property of this isolate makes it a good candidate for bioremediation of soils contaminated by s-triazine pesticides.

  15. Characterization of the in vitro assembly of FtsZ in Arthrobacter strain A3 using light scattering.

    Science.gov (United States)

    Yang, Fan; Zhang, Shanshan; Ding, Shenglong; Hou, Yannan; Yu, Linghui; Chen, Ximing; Xiao, Jianxi

    2016-10-01

    The self-assembly of FtsZ, the bacterial homolog of tubulin, plays an essential role in cell division. Light scattering technique is applied to real-time monitor the in vitro assembly of FtsZ in Arthrobacter strain A3, a newly isolated psychrotrophic bacterium. The critical concentration needed for the assembly is estimated as 6.7μM. The polymerization of FtsZ in Arthrobacter strain A3 requires both GTP and divalent metal ions, while salt is an unfavorable condition for the assembly. The FtsZ polymerizes under a wide range of pHs, with the fastest rate around pH 6.0. The FtsZ from Arthrobacter strain A3 resembles Mycobacterium tuberculosis FtsZ in terms of the dependence on divalent metal ions and the slow polymerization rate, while it is different from M. tuberculosis FtsZ considering the sensitivity to salt and pH. The comparison of FtsZ from different organisms will greatly advance our understanding of the biological role of the key cell division protein. PMID:27164494

  16. A method for the production of D-tagatose using a recombinant Pichia pastoris strain secreting β-D-galactosidase from Arthrobacter chlorophenolicus and a recombinant L-arabinose isomerase from Arthrobacter sp. 22c

    Directory of Open Access Journals (Sweden)

    Wanarska Marta

    2012-08-01

    Full Text Available Abstract Background D-Tagatose is a natural monosaccharide which can be used as a low-calorie sugar substitute in food, beverages and pharmaceutical products. It is also currently being tested as an anti-diabetic and obesity control drug. D-Tagatose is a rare sugar, but it can be manufactured by the chemical or enzymatic isomerization of D-galactose obtained by a β-D-galactosidase-catalyzed hydrolysis of milk sugar lactose and the separation of D-glucose and D-galactose. L-Arabinose isomerases catalyze in vitro the conversion of D-galactose to D-tagatose and are the most promising enzymes for the large-scale production of D-tagatose. Results In this study, the araA gene from psychrotolerant Antarctic bacterium Arthrobacter sp. 22c was isolated, cloned and expressed in Escherichia coli. The active form of recombinant Arthrobacter sp. 22c L-arabinose isomerase consists of six subunits with a combined molecular weight of approximately 335 kDa. The maximum activity of this enzyme towards D-galactose was determined as occurring at 52°C; however, it exhibited over 60% of maximum activity at 30°C. The recombinant Arthrobacter sp. 22c L-arabinose isomerase was optimally active at a broad pH range of 5 to 9. This enzyme is not dependent on divalent metal ions, since it was only marginally activated by Mg2+, Mn2+ or Ca2+ and slightly inhibited by Co2+ or Ni2+. The bioconversion yield of D-galactose to D-tagatose by the purified L-arabinose isomerase reached 30% after 36 h at 50°C. In this study, a recombinant Pichia pastoris yeast strain secreting β-D-galactosidase Arthrobacter chlorophenolicus was also constructed. During cultivation of this strain in a whey permeate, lactose was hydrolyzed and D-glucose was metabolized, whereas D-galactose was accumulated in the medium. Moreover, cultivation of the P. pastoris strain secreting β-D-galactosidase in a whey permeate supplemented with Arthrobacter sp. 22c L-arabinose isomerase resulted in a 90% yield

  17. Taxonomy and new collections of wild potato species in Central and Southern Peru in 1999

    NARCIS (Netherlands)

    Salas, A.R.; Spooner, D.M.; Huamán, Z.; Torres Maita, R.V.; Hoekstra, R.; Schüler, K.; Hijmans, R.J.

    2001-01-01

    Peru contains about half of the described wild potato taxa, and many of these are not yet preserved in genebanks. This paper reports results of the second of a series of five planned collecting expeditions to Peru. Collections were made in the central Peruvian departments of Ancash, Huancavelica, La

  18. Remarks on the species of Matuta Fabr. in the collection of the Leyden Museum

    NARCIS (Netherlands)

    Man, de J.G.

    1881-01-01

    The carcinological collection of our Museum contains no less than 270 specimens of the genus Matuta Fabr., preserved in spirits, collected in the seas of the Indo-Pacific Region, from the shores of the Red Sea to those of the eastern islands of the Malayan Archipelago. They belong to six different s

  19. Zooplankton species identities, zooplankton species number per sample, and zooplankton abundance collected using zooplankton net as part of the California Cooperative Fisheries Investigation (CALCOFI) project, for 1994-03-01 (NODC Accession 9700104)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities, zooplankton species number per sample, and zooplankton abundance were collected from March 1, 1994 to March 1, 1994. Data were...

  20. Four new species and one new subspecies of Asteroidea (Echinodermata) collected by the “Siboga” Expedition in the Indo-Malayan region

    NARCIS (Netherlands)

    Aziz, Aznam; Jangoux, Michel

    1985-01-01

    Four new species and one new subspecies of asteroids collected by the “Siboga” Expedition in the Indo-Malayan region are described. They are deep-water species belonging to the families Goniasteridae, Solasteridae, Ganeriidae, Asteriidae and Brisingidae.

  1. Harvest Records for Game Species Collected at Morgan Brake National Wildlife Refuges in 1997 and 1998

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — These records were taken by Refuge employees at check stations between 1997 and 1998 involving archery, muzzle loading, and multiple game species

  2. The accidental release of exotic species from breeding colonies and zoological collections.

    Science.gov (United States)

    Barrat, J; Richomme, C; Moinet, M

    2010-04-01

    Exotic species have often been introduced into a new country in zoological or botanical gardens or on game and fur farms. When accidentally or deliberately released, these alien species can become invasive and have negative impacts on native plant and animal communities and human activities. This article focuses on a selection of such invasive species: principally the American mink (Neovison vison), but also the coypu (Myocastor coypus), muskrat (Ondatra zibethicus), raccoon dog (Nyctereutes procyonoides), raccoon (Procyon lotor) and African sacred ibis (Threskiornis aethiopicus). In each of these cases, the authors describe the biological characteristics and life history of the species, in relation to its invasive capacity, the origins and establishment of non-native populations, the environmental consequences and possible control measures. The main negative impacts observed are the destruction of habitat, the introduction and/or spread of pathogens and changes in the composition of native communities with consequent effects on biodiversity. PMID:20617652

  3. The effect of nocturnal sampling on semen quality and the efficiency of collection in bovine species.

    Science.gov (United States)

    Yates, Jennifer H; Chandler, John E; Canal, Anita L; Braden Paul, J

    2003-12-01

    This study evaluated night and day semen collection regimes in Holstein and Brahman bulls (four bulls of each breed) that were collected weekly, each during a morning and a night collection. Ejaculates (n=64) were obtained via artificial vagina over 4 weeks. The first collection of each week alternated between night and day. Two collection teams were employed. Bull behavior parameters included reaction time to first mount, time to ejaculation, a refractory period test, and a thrust intensity test. The numbers of interruptions were counted as a managerial parameter. Pre-freeze semen parameters included total volume, initial motility and concentration. Post-freeze semen parameters measured were: 0- and 3-h post-thaw motility; percent intact acrosomes; and percent sperm abnormalities. Data were analyzed by least squares methods. The bull within breed effect differed (P<0.05) for behavior parameters. The bull within breed effect for total motile sperm harvested was not significant. The bull within breed response was mixed for post-freeze semen viability parameters. Bull within breed was not significant for sperm abnormalities. The night versus day treatment was significant for the managerial parameter (P=0.002). Although a different collection schedule for Bos indicus cattle was not warranted, the efficiency of the collection process was affected by extraneous environmental conditions. PMID:14580649

  4. Zooplankton species identities and other data collected by ATLANTIS II from net casts in NW Atlantic Ocean from 23 November 1988 to 04 December 1988 (NODC Accession 9500081)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities and other data were collected using net casts in the Northwest Atlantic Ocean from ATLANTIS II. Data were collected from 23 November...

  5. Zooplankton species identities collected from zooplankton net casts in Indian Ocean from 17 February 1960 to 23 July 1962 (NODC Accession 9400059)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Zooplankton species identities and other data were collected using zooplankton net casts in the Indian Ocean. Data were collected from 17 February 1960 to 23 July...

  6. Toxicity screening of soils from different mine areas—A contribution to track the sensitivity and variability of Arthrobacter globiformis assay

    Energy Technology Data Exchange (ETDEWEB)

    Marques, Catarina R., E-mail: crmarques@ua.pt [Departamento de Biologia and CESAM (Centro de Estudos do Ambiente e do Mar), Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro (Portugal); Caetano, Ana L. [Departamento de Biologia and CESAM (Centro de Estudos do Ambiente e do Mar), Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro (Portugal); Haller, Andreas [ECT Oekotoxikologie GmbH, Böttgerstraße 2–14, D-65439 Flörsheim a. M. (Germany); Gonçalves, Fernando [Departamento de Biologia and CESAM (Centro de Estudos do Ambiente e do Mar), Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro (Portugal); Pereira, Ruth [Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, s/n, 4169-007 Porto (Portugal); Interdisciplinary Centre of Marine and Environmental Research (CIIMAR/CIMAR), Universidade do Porto, Rua dos Bragas 289, P 4050-123 Porto (Portugal); Römbke, Jörg [ECT Oekotoxikologie GmbH, Böttgerstraße 2–14, D-65439 Flörsheim a. M. (Germany)

    2014-06-01

    Highlights: • The assay gave rapid and feasible discrimination of toxic soils to A. globiformis. • Sensitive and low variability response to soils from different regions. • Soil properties may interfere with metal toxicity and fluorescence measurements. • Proposal of a toxicity threshold for the contact assay regarding soils. • A. globiformis assay should be included in the Tier I of risk assessment frameworks. - Abstract: This study used the Arthrobacter globiformis solid-contact test for assessing the quality of soils collected in areas subjected to past and present mine activities in Europe (uranium mine, Portugal) and North Africa (phosphogypsum pile, Tunisia; iron mine, Morocco). As to discriminate the influence of soils natural variability from the effect of contaminants, toxicity thresholds were derived for this test, based on the dataset of each study area. Furthermore, the test sensitivity and variability was also evaluated. As a result, soils that inhibited A. globiformis dehydrogenase activity above 45% or 50% relatively to the control, were considered to be toxic. Despite the soil metal content determined, the properties of soils seemed to influence dehydrogenase activity. Overall, the contact test provided a coherent outcome comparing to other more time-consuming and effort-demanding ecotoxicological assays. Our results strengthened the feasibility and ecological relevance of this assay, which variability was quite reduced hence suggesting its potential integration within the test battery of tier 1 of soil risk assessment schemes.

  7. Grassland Species Collected in an Area of the Amazon Dense Rain Forest Southern

    Directory of Open Access Journals (Sweden)

    J. M. P. Florentino

    2013-07-01

    Full Text Available Abstract: The knowledge related to floristic composition and all strata, including herbaceous, are needed to characterize and understand the dynamics of tropical forests. This study aimed to investigate the floristic composition of herbs in an area of ??tropical rain forest of Mato Grosso, producing a list of herbaceous species are on site. All individuals and herbaceous hemiepiphytes above 5 cm were recorded. Inventoried 7,965 individuals, representing 70 species. The angiosperms were represented by 10 families, with the most representative families in number of species Cyperaceae and Poaceae. Ferns were represented by 13 families, the family Pteridaceae as the richest in species. These results reinforce the need to increase the sampling effort for the herbaceous layer, especially floristic surveys for Southern Amazon as of 70 species inventoried 11espies not have records for the state of Mato Grosso. The Amazon of Mato Grosso suffers severe pressure from deforestation, as part of the region known as the Arc of Deforestation. This fact combined with the results of this work shows the urgency to intensify the sampling effort in this region that presents itself as a void in terms of surveys of plant diversity.Keywords: floristic composition, plant diversity, ferns

  8. Detection of inter-species contaminations in a cell line collection using isoenzymes and molecular markers

    Directory of Open Access Journals (Sweden)

    M. Ferarri

    2011-03-01

    Full Text Available As in human research, also in livestock species the use of continuous cell cultures is an important tool for the study of physiological and tissue developmental processes, as well as for immunological, virological and toxicological assays. This widespread use of animal cell cultures needs that quality control tests are systematically performed in order to evaluate the authenticity of the cells used. Cell cross-contamination (CCC can occur with cells from other species (interspecies contamination or with unrelated cells from the same species (intraspecies contamination. Several methods have been used to identify inter- and intraspecies CCC: isoenzyme profile (Nims, 1998, cytogenetic analysis (Macville et al., 1996, DNA fingerprinting (Stacey et al., 1992, and, more recently, PCR-based methods (Matsuo et al., 1999. Amplified Fragment Length Polymorphism (AFLP technology is a PCR-based technique (Vos et al., 1995 able to reveal polymorphism, with no need of prior sequence information or probe isolation..........

  9. Chemical composition and digestibility of some browse plant species collected from Algerian arid rangelands

    Energy Technology Data Exchange (ETDEWEB)

    Boufennara, S.; Lopez, S.; Boussebouna, H.; Bodas, R.; Bouazza, L.

    2012-11-01

    Many wild browse and bush species are undervalued mainly because of insufficient knowledge about their potential feeding value. The objective was to evaluate some nutritional attributes of various Algerian browse and shub species (Atriplex halimus, Artemisia campestris, Artemisia herba-alba, Astragalus gombiformis, Calobota saharae, Retama raetam, Stipagrostis pungens, Lygeum spartum and Stipa tenacissima). Chemical composition, phenols and tannins concentration, in vitro digestibility, in vitro gas production kinetics and in vitro bio-assay for assessment of tannins using buffered rumen fluid, and in situ disappearence of the edible parts of the plants (leaves, thin twigs and flowers) were determined. In general, protein content in dicotyledon species was always greater than in monocotyledon grasses, these showing higher neutral and acid detergent fibre and lower lignin contents than dicots. The tannin concentrations varied considerably between species, but in general the plants investigated in this study had low tannin contents (except for Artemisia spp. and S. tenacissima). Monocots showed lower in vitro and in situ digestibilities, fermentation rate, cumulative gas production and extent of degradation than dicot species. The plants were clustered by principal components analysis in two groups: poor-quality grasses and the most digestible dicot species. Chemical composition (neutral detergent fibre and protein) and digestibility were the main influential variables determining the ranking. In conclusion, A. halimus, A. campestris, A. herba-alba and A. gombiformis can be considered of greater nutritional value than the highly fibrous and low digestible grasses (S. pungens, L. spartum and S. tenacissima) that should be considered emergency roughages. (Author) 46 refs.

  10. Biodegradation of nitroglycerin in porous media and potential for bioaugmentation with Arthrobacter sp. strain JBH1.

    Science.gov (United States)

    Husserl, Johana; Hughes, Joseph B

    2013-07-01

    Nitroglycerin (NG) is a toxic explosive found as a contaminant of soil and groundwater. Several microbial strains are capable of partially reducing the NG molecule to dinitro or mononitroesters. Recently, a strain capable of growing on NG as the sole source of carbon and nitrogen (Arthrobacter sp. strain JBH1) was isolated from contaminated soil. Despite the widespread presence of microbial strains capable of transforming NG in contaminated soils and sediments, the extent of NG biodegradation at contaminated sites is still unknown. In this study column experiments were conducted to investigate the extent of microbial degradation of NG in saturated porous media, specifically after bioaugmentation with JBH1. Initial experiments using sterile, low sorptivity sand, showed mineralization of NG after bioaugmentation with JBH1 in the absence of sources of carbon and nitrogen other than NG. Results could be modeled using a first order degradation rate of 0.14d(-1). Further experiments conducted using contaminated soil with high organic carbon content (highly sorptive) resulted in column effluents that did not contain NG although high dinitroester concentrations were observed. Bioaugmentation with JBH1 in sediments containing strains capable of partial transformation of NG resulted in complete mineralization of NG and faster degradation rates.

  11. Biodegradation of Benzo[a]pyrene by Arthrobacter oxydans B4

    Institute of Scientific and Technical Information of China (English)

    PENG Hui; YIN Hua; DENG Jun; YE Jin-Shao; CHEN Shuo-Na; HE Bao-Yan; ZHANG Na

    2012-01-01

    A bacterial strain,Arthrobacter oxydans (B4),capable of degrading benzo[a]pyrene (BaP) in water body,was isolated from a polycyclic aromatic hydrocarbons-contaminated site.Effects of different factors,such as reaction time,pH value,temperature and organic nutrients,on BaP biodegradation by the strain B4 were studied.After 5 d treatment,the concentration of BaP in mineral salts medium was reduced to 0.318 mg L-1,compared to the initial concentration of 1.000 mg L-1.There was a process of acid formation during the degradation with pH failing from initial 7.01 to 4.61 at 5 d,so keeping the water body under slightly alkaline condition was propitious to BaP degradation.Strain B4 efficiently degraded BaP at 20 to 37 ℃ with addition of organic nutrients.The biodegradation and transformation of BaP mainly occurred on cell surfaces,and extracellular secretions played an important role in these processes.Fourier transform infrared spectroscopy and gas chromatograph-mass spectrometer analyses of metabolites showed that ring cleavage occurred in the BaP degradation process and the resulting metabolically utilizable substrates were generated as sole carbon sources for B4 growth.Furthermore,mineralization extent of metabolites was verified by determining the total organic carbon and inorganic carbon in the degradation system.

  12. The rhizobacterium Arthrobacter agilis produces dimethylhexadecylamine, a compound that inhibits growth of phytopathogenic fungi in vitro.

    Science.gov (United States)

    Velázquez-Becerra, Crisanto; Macías-Rodríguez, Lourdes I; López-Bucio, José; Flores-Cortez, Idolina; Santoyo, Gustavo; Hernández-Soberano, Christian; Valencia-Cantero, Eduardo

    2013-12-01

    Plant diseases caused by fungal pathogens such as Botrytis cinerea and the oomycete Phytophthora cinnamomi affect agricultural production worldwide. Control of these pests can be done by the use of fungicides such as captan, which may have deleterious effects on human health. This study demonstrates that the rhizobacterium Arthrobacter agilis UMCV2 produces volatile organic compounds that inhibit the growth of B. cinerea in vitro. A single compound from the volatile blends, namely dimethylhexadecylamine (DMHDA), could inhibit the growth of both B. cinerea and P. cinnamomi when supplied to the growth medium in low concentrations. DMHDA also inhibited the growth of beneficial fungi Trichoderma virens and Trichoderma atroviride but at much higher concentrations. DMHDA-related aminolipids containing 4, 8, 10, 12, and 14 carbons in the alkyl chain were tested for their inhibitory effect on the growth of the pathogens. The results show that the most active compound from those tested was dimethyldodecylamine. This effect correlates with a decrease in the number of membrane lipids present in the mycelium of the pathogen including eicosanoic acid, (Z)-9-hexadecenoic acid, methyl ester, and (Z)-9-octadecenoic acid, methyl ester. Strawberry leaflets treated with DMHDA were not injured by the compound. These data indicate that DMHDA and related compounds, which can be produced by microorganisms may effectively inhibit the proliferation of certain plant pathogens. PMID:23674267

  13. Plasmid-encoded degradation of p-nitrophenol and 4-nitrocatechol by Arthrobacter protophormiae.

    Science.gov (United States)

    Chauhan, A; Chakraborti, A K; Jain, R K

    2000-04-21

    Arthrobacter protophormiae strain RKJ100 is capable of utilizing p-nitrophenol (PNP) as well as 4-nitrocatechol (NC) as the sole source of carbon, nitrogen and energy. The degradation of PNP and NC by this microorganism takes place through an oxidative route, as stoichiometry of nitrite molecules was observed when the strain was grown on PNP or NC as sole carbon and energy sources. The degradative pathways of PNP and NC were elucidated on the basis of enzyme assays and chemical characterization of the intermediates by TLC, GC, (1)H NMR, GC-MS, UV spectroscopy, and HPLC analyses. Our studies clearly indicate that the degradation of PNP proceeds with the formation of p-benzoquinone (BQ) and hydroquinone (HQ) and is further degraded via the beta-ketoadipate pathway. Degradation of NC involved initial oxidation to generate 1,2,4-benzenetriol (BT) and 2-hydroxy-1,4-benzoquinone; the latter intermediate is then reductively dehydroxylated, forming BQ and HQ, and is further cleaved via beta-ketoadipate to TCA intermediates. It is likely, therefore, that the same set of genes encode the further metabolism of HQ in PNP and NC degradation. A plasmid of approximately 65 kb was found to be responsible for harboring genes for PNP and NC degradation in this strain. This was based on the fact that PNP(-) NC(-) derivatives were devoid of the plasmid and had simultaneously lost their capability to grow at the expense of these nitroaromatic compounds.

  14. Improving stability of a novel dextran-degrading enzyme from marine Arthrobacter oxydans KQ11.

    Science.gov (United States)

    Wang, Delong; Lu, Mingsheng; Wang, Xiaobei; Jiao, Yuliang; Fang, Yaowei; Liu, Zhaopu; Wang, Shujun

    2014-03-15

    Dextranases can hydrolyze dextran, so they are used in the sugar industry to mitigate the milling problems associated with dextran contamination. Few studies have been carried out on the storage stability of dextranase, let alone the dextranase of Arthrobacter oxydans KQ11 isolated from sea mud samples. This study improved the storage stability of dextranase from marine A. oxydans KQ11 by adding enzymatic protective reagents (stabilizer and antiseptic). Initially, the conditions (55 °C and 30 min) for maintaining 50% dextranase activity were obtained. Then, the best stabilizers of dextranase were obtained, namely, glycerol (16%), sodium acetate (18%) and sodium citrate (20%). Results showed that p-hydroxybenzoic acid compound sodium acetate (0.05%), D-sodium isoascorbiate (0.03%), and potassium sorbate (0.05%) were the best antiseptics. Subsequent validation experiment showed that dextranase with enzymatic protective reagents maintained 70.8% and 28.96% activities at the 13th week at 25 and 37 °C, respectively. PMID:24528732

  15. Isolation and characteristics of Arthrobacter sp. strain CW-1 for biodegradation of PAEs

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Isolation of new bacterial strains and recognition of their metabolic activities are highly desirable for sustainability of natural ecosystems. Biodegradation of dimethyl phthalate (DMP) under anoxic conditions has been shown to occur as a series of sequential steps using strain CW-1 isolated from digested sludge of Sibao Wastewater Treatment Plant in Hangzhou, China. The microbial colony on LB medium was yellowish, 3~5 mm in diameter, convex in the center, and embedded in mucous externally.The individual cells of strain CW-1 are irregular rods, measuring (0.6~0.7)×(0.9~1.0) μm, V-shaped, with clubbed ends, Gram positive and without any filaments. 16S rDNA (1438 bp) sequence analysis showed that the strain was related to Arthrobacter sp.CW-1 and can degrade PAEs utilizing nitrate as electron acceptor, but cannot mineralize DMP completely. The degradation pathway was recommended as: dimethyl phthalate (DMP)→monomethyl phthalate (MMP)→phthalic acid (PA). DMP biodegradation was a first order reaction with degradation rate constant of 0.3033 d-1 and half-life 2.25 d. The DMP conversion to PA by CW-1 could be described by using sequential kinetic model.

  16. Adenylate nucleotide levels and energy charge in Arthrobacter crystallopoietes during growth and starvation.

    Science.gov (United States)

    Leps, W T; Ensign, J C

    1979-07-01

    The adenylate nucleotide concentrations, based on internal water space, were determined in cells of Arthrobacter crystallopoietes during growth and starvation and the energy charge of the cells was calculated. The energy charge of spherical cells rose during the first 10 h of growth, then remained nearly constant for as long as 20 h into the stationary phase. The energy charge of rod-shaped cells rose during the first 4 h of growth, then remained constant during subsequent growth and decreased in the stationary growth phase. Both spherical and rod-shaped cells excreted adenosine monophosphate but not adenosine triphosphate or adenosine diphosphate during starvation. The intracellular energy charge of spherical cells declined during the initial 10 h and then remained constant for 1 week of starvation at a value of 0.78. The intracellular energy charge of rod-shaped cells declined during the first 24 h of starvation, remained constant for the next 80 h, then decreased to a value of 0.73 after a total of 168 h starvation. Both cell forms remained more than 90% viable during this time. Addition of a carbon and energy source to starving cells resulted in an increase in the ATP concentration and as a result the energy charge increased to the smae levels as found during growth.

  17. Detection of Vibrio cholerae and Acanthamoeba species from same natural water samples collected from different cholera endemic areas in Sudan

    Directory of Open Access Journals (Sweden)

    Saeed Amir

    2011-04-01

    Full Text Available Abstract Background Vibrio cholerae O1 and V. cholerae O139 infect humans, causing the diarrheal and waterborne disease cholera, which is a worldwide health problem. V. cholerae and the free-living amoebae Acanthamoeba species are present in aquatic environments, including drinking water and it has shown that Acanthamoebae support bacterial growth and survival. Recently it has shown that Acanthamoeba species enhanced growth and survival of V. cholerae O1 and O139. Water samples from different cholera endemic areas in Sudan were collected with the aim to detect both V. cholerae and Acanthamoeba species from same natural water samples by polymerase chain reaction (PCR. Findings For the first time both V. cholerae and Acanthamoeba species were detected in same natural water samples collected from different cholera endemic areas in Sudan. 89% of detected V. cholerae was found with Acanthamoeba in same water samples. Conclusions The current findings disclose Acanthamoedae as a biological factor enhancing survival of V. cholerae in nature.

  18. Development of a core collection of Triticum and Aegilops species for improvement of wheat for activity against chronic diseases

    Directory of Open Access Journals (Sweden)

    Santra Meenakshi

    2013-02-01

    Full Text Available Abstract Background The objective of this study was to develop a core collection of Triticum and Aegilops species as a resource for the identification and characterization of wheat lines with preventive activity against chronic diseases. Given that cancer is the leading cause of mortality in the world and shares risk factors with obesity, type-2 diabetes, and cardiovascular disease, and given that wheat has been reported to protect against these diseases, the core collection was developed based on cancer prevalence. Methods The Germplasm Resources Information Network (GRIN database was used to identify Triticum and Aegilops species grown in regions of the world that vary in cancer prevalence based on the International Agency for Cancer Research GLOBOCAN world map of cancer statistics (2008. Cancer incidence data drove variety selection with secondary consideration of ploidy, center of origin, and climate. Results Analysis indicated that the geographic regions from which wheat is considered to have originated have a lower incidence of cancer than other geographic regions (P Conclusions A diverse core collection of wheat germplasm has been established from a range of regions worldwide. This core collection will be used to identify wheat lines with activity against chronic diseases using anticancer activity as a screening tool.

  19. Informing Species Conservation at Multiple Scales Using Data Collected for Marine Mammal Stock Assessments

    OpenAIRE

    Alana Grech; James Sheppard; Helene Marsh

    2011-01-01

    BACKGROUND: Conservation planning and the design of marine protected areas (MPAs) requires spatially explicit information on the distribution of ecological features. Most species of marine mammals range over large areas and across multiple planning regions. The spatial distributions of marine mammals are difficult to predict using habitat modelling at ecological scales because of insufficient understanding of their habitat needs, however, relevant information may be available from surveys con...

  20. A polyphasic approach for characterization of a collection of cereal isolates of the Fusarium incarnatum-equiseti species complex.

    Science.gov (United States)

    Villani, Alessandra; Moretti, Antonio; De Saeger, Sarah; Han, Zheng; Di Mavungu, Jose Diana; Soares, Célia M G; Proctor, Robert H; Venâncio, Armando; Lima, Nelson; Stea, Gaetano; Paciolla, Costantino; Logrieco, Antonio F; Susca, Antonia

    2016-10-01

    DNA-based phylogenetic analyses have resolved the fungal genus Fusarium into multiple species complexes. The F. incarnatum-equiseti species complex (FIESC) includes fusaria associated with several diseases of agriculturally important crops, including cereals. Although members of FIESC are considered to be only moderately aggressive, they are able to produce a diversity of mycotoxins, including trichothecenes, which can accumulate to harmful levels in cereals. High levels of cryptic speciation have been detected within the FIESC. As a result, it is often necessary to use approaches other than morphological characterization to distinguish species. In the current study, we used a polyphasic approach to characterize a collection of 69 FIESC isolates recovered from cereals in Europe, Turkey, and North America. In a species phylogeny inferred from nucleotide sequences from four housekeeping genes, 65 of the isolates were resolved within the Equiseti clade of the FIESC, and four isolates were resolved within the Incarnatum clade. Seven isolates were resolved as a genealogically exclusive lineage, designated here as FIESC 31. Phylogenies based on nucleotide sequences of trichothecene biosynthetic genes and MALDI-TOF MS (Matrix-Assisted Laser Desorption/Ionization Time-Of-Flight Mass Spectrometry) were largely concordant with phylogeny inferred from the housekeeping gene. Finally, Liquid Chromatography (Time-Of-Flight) Mass Spectrometry [LC-(TOF-)MS(/MS)] revealed variability in mycotoxin production profiles among the different phylogenetic species investigated in this study. PMID:27376677

  1. A new species of parasitic wasp Neastymachus Girault (Hymenoptera: Chalcidoidea: Encyrtidae collected by fogging Vateria indic a L. (Dipterocarpaceae canopy in the Western Ghats of India

    Directory of Open Access Journals (Sweden)

    S. Singh

    2012-08-01

    Full Text Available A new species of the encyrtid genus Neastymachus (N. punctatiscutellum Singh, sp. nov. is described from a female specimen collected from the Western Ghats of India. It was collected by fogging the canopy of Vateria indica L. (Dipterocarpaceae. A key to the females of the Afrotropical, Australian and Oriental species is also given.

  2. Survey of Ticks Collected from Tennessee Cattle and Their Pastures for Anaplasma and Ehrlichia Species.

    Science.gov (United States)

    Pompo, K; Mays, S; Wesselman, C; Paulsen, D J; Fryxell, R T Trout

    2016-02-01

    Anaplasma marginale is the causative agent for bovine anaplasmosis (BA) and Ehrlichia ruminantium is the causative agent for heartwater, 2 devastating diseases of cattle. BA is common in the United States and frequently reported in western Tennessee cattle; however, cases of heartwater are not yet established in the continental United States. Because both pathogens are transmitted via the bites of infected ticks, the objective of this study was to survey cattle and pastures for ticks and for each pathogen. University of Tennessee AgResearch has 7 research and education centers (REC) located throughout the state at which they manage cattle. Ticks were collected from selected cattle (every fourth to sixth animal) and pastures (via dragging) associated with the herd from each REC during the summer of 2013. A total of 512 ticks were collected from cattle (n = 386) and pastures (n = 126) and were PCR-screened for Anaplasma and Ehrlichia using genus-specific primers. Collections consisted of 398 (77.7%) Amblyomma americanum, 84 (16.4%) Amblyomma maculatum, and 30 (5.9%) Dermacentor variabilis. Ticks were not recovered from pastures or cattle east of the Tennessee Plateau. The North American vectors for An. marginale and E. ruminantium were identified (D. variabilis and A. maculatum, respectively), but neither pathogen was recovered. A large proportion of ticks were collected from cattle and, of these, a majority were attached to their host (compared to questing on their host or engorged on the host). Four A. americanum were positive for Ehrlichia spp. (Ehrlichia ewingii, Ehrlichia chaffeensis, and Panola Mountain Ehrlichia), all in western Tennessee. With the identification of a few Ehrlichia infections in cattle-associated ticks and current A. marginale rates in Tennessee beef cattle nearing 11%, additional research is needed to establish baseline tick, Anaplasma, and Ehrlichia data for future management studies.

  3. Taxonomy of Atlantic Central African orchids 2. A second species of the rare genus Distylodon (Orchidaceae, Angraecinae collected in Cameroon

    Directory of Open Access Journals (Sweden)

    Vincent Droissart

    2014-04-01

    Full Text Available While conducting field inventories in South Cameroon, we collected two specimens of a new species that we considered to belong to the genus Angraecopsis. Afterwards, a careful examination of specimens housed at main herbaria, along with the nomenclatural types, allows us to place it in Distylodon, a monotypic genus previously known from East Africa. Distylodon sonkeanum Droissart, Stévart & P.J.Cribb, sp. nov. was collected in the lowland coastal forest of Atlantic Central Africa. It is known from a single locality in the surroundings of the Campo-Ma’an National Park. The species differs from D. comptum, by its several-flowered inflorescences, longer leaves and spur, and shorter pedicel and ovary. The species appears to be rare and is assessed as Critically Endangered [CR B2ab(iii] according to IUCN Red List Categories and Criteria. New field investigations are required to attempt to find it in the low-elevation parts of the Campo-Ma’an National Park in Cameroon.

  4. Fusarium species isolated from Pennisetum clandestinum collected during outbreaks of kikuyu poisoning in cattle in South Africa.

    Science.gov (United States)

    Botha, Christo J; Truter, Mariëtte; Jacobs, Adriaana

    2014-11-20

    Kikuyu poisoning occurs sporadically in South Africa. It is of major economic importance, as valuable dairy cows are often poisoned by it, and once affected, the mortality rate is high. Pennisetum clandestinum samples were collected during eight outbreaks of kikuyu poisoning in cattle in the Eastern Cape Province of South Africa from 2008 to 2010. The kikuyu grass samples were submitted specifically for the isolation and molecular identification of Fusarium species, as it was recently suggested that mycotoxins synthesised by Fusarium torulosum could be the cause of this intoxication. Ninety-four Fusarium isolates were retrieved from the grass samples, of which 72 were members of the Fusarium incarnatum/Fusarium equiseti species complex based on morphology and phylogenetic analyses of the translation elongation factor 1α sequence data. The South African isolates from kikuyu identified as members of the F. incarnatum/F. equiseti species complex grouped together in six separate clades. The other isolates were Fusarium culmorum (n = 3), Fusarium redolens (n = 4) and Fusarium oxysporum (n = 15). Although F. torulosum could not be isolated from P. clandestinum collected during kikuyu poisoning outbreaks in South Africa, the mycotoxicosis theory is still highly plausible.

  5. Fusarium species isolated from Pennisetum clandestinum collected during outbreaks of kikuyu poisoning in cattle in South Africa

    Directory of Open Access Journals (Sweden)

    Christo J. Botha

    2014-02-01

    Full Text Available Kikuyu poisoning occurs sporadically in South Africa. It is of major economic importance, as valuable dairy cows are often poisoned by it, and once affected, the mortality rate is high. Pennisetum clandestinum samples were collected during eight outbreaks of kikuyu poisoning in cattle in the Eastern Cape Province of South Africa from 2008 to 2010. The kikuyu grass samples were submitted specifically for the isolation and molecular identification of Fusarium species, as it was recently suggested that mycotoxins synthesised by Fusarium torulosum could be the cause of this intoxication. Ninety-four Fusarium isolates were retrieved from the grass samples, of which 72 were members of the Fusarium incarnatum/Fusarium equiseti species complex based on morphology and phylogenetic analyses of the translation elongation factor 1α sequence data. The South African isolates from kikuyu identified as members of the F. incarnatum/F. equiseti species complex grouped together in six separate clades. The other isolates were Fusarium culmorum (n = 3, Fusarium redolens (n = 4 and Fusarium oxysporum (n = 15. Although F. torulosum could not be isolated from P. clandestinum collected during kikuyu poisoning outbreaks in South Africa, the mycotoxicosis theory is still highly plausible.

  6. Molecular identification and antifungal susceptibility profiles of Candida parapsilosis complex species isolated from culture collection of clinical samples

    Directory of Open Access Journals (Sweden)

    Fábio Silvestre Ataides

    2015-08-01

    Full Text Available AbstractINTRODUCTION:Candida parapsilosis is a common yeast species found in cases of onychomycosis and candidemia associated with infected intravascular devices. In this study, we differentiated Candida parapsilosis sensu stricto, Candida orthopsilosis , and Candida metapsilosis from a culture collection containing blood and subungual scraping samples. Furthermore, we assessed the in vitro antifungal susceptibility of these species to fluconazole, itraconazole, voriconazole, posaconazole, amphotericin B, and caspofungin.METHODS:Differentiation of C. parapsilosis complex species was performed by amplification of the secondary alcohol dehydrogenase (SADH gene and digestion by the restriction enzyme Ban I. All isolates were evaluated for the determination of minimal inhibitory concentrations using Etest, a method for antifungal susceptibility testing.RESULTS:Among the 87 isolates, 78 (89.7% were identified as C. parapsilosis sensu stricto , five (5.7% were identified as C. orthopsilosis , and four (4.6% were identified as C. metapsilosis . Analysis of antifungal susceptibility showed that C. parapsilosis sensu strictoisolates were less susceptible to amphotericin B and itraconazole. One C. parapsilosis sensu stricto isolate was resistant to amphotericin B and itraconazole. Moreover, 10.2% of C. parapsilosis sensu stricto isolates were resistant to caspofungin. Two C. parapsilosis sensu strictoisolates and one C. metapsilosis isolate were susceptible to fluconazole in a dose-dependent manner.CONCLUSIONS:We reported the first molecular identification of C. parapsilosiscomplex species in State of Goiás, Brazil. Additionally, we showed that although the three species exhibited differences in antifungal susceptibility profiles, the primary susceptibility of this species was to caspofungin.

  7. Characterizing the Catalytic Potential of Deinococcus, Arthrobacter and other Robust Bacteria in Contaminated Subsurface Environments of the Hanford Site

    Energy Technology Data Exchange (ETDEWEB)

    Daly, Michael J.

    2005-06-01

    Natural selection in highly radioactive waste sites may yield bacteria with favorable bioremediating characteristics. However, until recently the microbial ecology of such environments has remained unexplored because of the high costs and technical complexities associated with extracting and characterizing samples from such sites. We have examined the bacterial ecology within radioactive sediments from a high-level nuclear waste plume in the vadose zone on the DOE?s Hanford Site in south-central Washington state (Fredrickson et al, 2004). Manganese-dependent, radiation resistant bacteria have been isolated from this contaminated site including the highly Mn-dependent Deinococcus and Arthrobacter spp.

  8. California dragonfly and damselfly (Odonata database: temporal and spatial distribution of species records collected over the past century

    Directory of Open Access Journals (Sweden)

    Joan E. Ball-Damerow

    2015-02-01

    Full Text Available The recently completed Odonata database for California consists of specimen records from the major entomology collections of the state, large Odonata collections outside of the state, previous literature, historical and recent field surveys, and from enthusiast group observations. The database includes 32,025 total records and 19,000 unique records for 106 species of dragonflies and damselflies, with records spanning 1879–2013. Records have been geographically referenced using the point-radius method to assign coordinates and an uncertainty radius to specimen locations. In addition to describing techniques used in data acquisition, georeferencing, and quality control, we present assessments of the temporal, spatial, and taxonomic distribution of records. We use this information to identify biases in the data, and to determine changes in species prevalence, latitudinal ranges, and elevation ranges when comparing records before 1976 and after 1979. The average latitude of where records occurred increased by 78 km over these time periods. While average elevation did not change significantly, the average minimum elevation across species declined by 108 m. Odonata distribution may be generally shifting northwards as temperature warms and to lower minimum elevations in response to increased summer water availability in low-elevation agricultural regions. The unexpected decline in elevation may also be partially the result of bias in recent collections towards centers of human population, which tend to occur at lower elevations. This study emphasizes the need to address temporal, spatial, and taxonomic biases in museum and observational records in order to produce reliable conclusions from such data.

  9. California dragonfly and damselfly (Odonata) database: temporal and spatial distribution of species records collected over the past century.

    Science.gov (United States)

    Ball-Damerow, Joan E; Oboyski, Peter T; Resh, Vincent H

    2015-01-01

    The recently completed Odonata database for California consists of specimen records from the major entomology collections of the state, large Odonata collections outside of the state, previous literature, historical and recent field surveys, and from enthusiast group observations. The database includes 32,025 total records and 19,000 unique records for 106 species of dragonflies and damselflies, with records spanning 1879-2013. Records have been geographically referenced using the point-radius method to assign coordinates and an uncertainty radius to specimen locations. In addition to describing techniques used in data acquisition, georeferencing, and quality control, we present assessments of the temporal, spatial, and taxonomic distribution of records. We use this information to identify biases in the data, and to determine changes in species prevalence, latitudinal ranges, and elevation ranges when comparing records before 1976 and after 1979. The average latitude of where records occurred increased by 78 km over these time periods. While average elevation did not change significantly, the average minimum elevation across species declined by 108 m. Odonata distribution may be generally shifting northwards as temperature warms and to lower minimum elevations in response to increased summer water availability in low-elevation agricultural regions. The unexpected decline in elevation may also be partially the result of bias in recent collections towards centers of human population, which tend to occur at lower elevations. This study emphasizes the need to address temporal, spatial, and taxonomic biases in museum and observational records in order to produce reliable conclusions from such data. PMID:25709531

  10. Are both sympatric species Ilex perado and Ilex canariensis secretly hybridizing? Indication from nuclear markers collected in Tenerife

    Directory of Open Access Journals (Sweden)

    Manen Jean-François

    2004-11-01

    Full Text Available Abstract Background Intra-specific and intra-individual polymorphism is frequently observed in nuclear markers of Ilex (Aquifoliaceae and discrepancy between plastid and nuclear phylogenies is the rule in this genus. These observations suggest that inter-specific plastid or/and nuclear introgression played an important role in the process of evolution of Ilex. With the aim of a precise understanding of the evolution of this genus, two distantly related sympatric species collected in Tenerife (Canary Islands, I. perado and I. canariensis, were studied in detail. Introgression between these two species was previously never reported. One plastid marker (the atpB-rbcL spacer and two nuclear markers, the ribosomal internal transcribed spacer (ITS and the nuclear encoded plastid glutamine synthetase (nepGS were analyzed for 13 and 27 individuals of I. perado and I. canariensis, respectively. Results The plastid marker is intra-specifically constant and correlated with species identity. On the other hand, whereas the nuclear markers are conserved in I. perado, they are highly polymorphic in I. canariensis. The presence of pseudogenes and recombination in ITS sequences of I. canariensis explain this polymorphism. Ancestral sequence polymorphism with incomplete lineage sorting, or past or recent hybridization with an unknown species could explain this polymorphism, not resolved by concerted evolution. However, as already reported for many other plants, past or recent introgression of an alien genotype seem the most probable explanation for such a tremendous polymorphism. Conclusions Data do not allow the determination with certitude of the putative species introgressing I. canariensis, but I. perado is suspected. The introgression would be unilateral, with I. perado as the male donor, and the paternal sequences would be rapidly converted in highly divergent and consequently unidentifiable pseudogenes. At least, this study allows the establishment of

  11. A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

    Directory of Open Access Journals (Sweden)

    Muhammad Shah Nawaz-ul-Rehman

    Full Text Available CLCuD in southern Asia is caused by a complex of multiple begomoviruses (whitefly transmitted, single-stranded [ss]DNA viruses in association with a specific ssDNA satellite; Cotton leaf curl Multan betasatellite (CLCuMuB. A further single ssDNA molecule, for which the collective name alphasatellites has been proposed, is also frequently associated with begomovirus-betasatellite complexes. Multan is in the center of the cotton growing area of Pakistan and has seen some of the worst problems caused by CLCuD. An exhaustive analysis of the diversity of begomoviruses and their satellites occurring in 15 Gossypium species (including G. hirsutum, the mainstay of Pakistan's cotton production that are maintained in an orchard in the vicinity of Multan has been conducted using φ29 DNA polymerase-mediated rolling-circle amplification, cloning and sequence analysis. The non-cultivated Gossypium species, including non-symptomatic plants, were found to harbor a much greater diversity of begomoviruses and satellites than found in the cultivated G. hirsutum. Furthermore an African cassava mosaic virus (a virus previously only identified in Africa DNA-A component and a Jatropha curcas mosaic virus (a virus occurring only in southern India DNA-B component were identified. Consistent with earlier studies of cotton in southern Asia, only a single species of betasatellite, CLCuMuB, was identified. The diversity of alphasatellites was much greater, with many previously unknown species, in the non-cultivated cotton species than in G. hirsutum. Inoculation of newly identified components showed them to be competent for symptomatic infection of Nicotiana benthamiana plants. The significance of the findings with respect to our understanding of the role of host selection in virus diversity in crops and the geographical spread of viruses by human activity are discussed.

  12. A melting pot of Old World begomoviruses and their satellites infecting a collection of Gossypium species in Pakistan.

    Science.gov (United States)

    Nawaz-ul-Rehman, Muhammad Shah; Briddon, Rob W; Fauquet, Claude M

    2012-01-01

    CLCuD in southern Asia is caused by a complex of multiple begomoviruses (whitefly transmitted, single-stranded [ss]DNA viruses) in association with a specific ssDNA satellite; Cotton leaf curl Multan betasatellite (CLCuMuB). A further single ssDNA molecule, for which the collective name alphasatellites has been proposed, is also frequently associated with begomovirus-betasatellite complexes. Multan is in the center of the cotton growing area of Pakistan and has seen some of the worst problems caused by CLCuD. An exhaustive analysis of the diversity of begomoviruses and their satellites occurring in 15 Gossypium species (including G. hirsutum, the mainstay of Pakistan's cotton production) that are maintained in an orchard in the vicinity of Multan has been conducted using φ29 DNA polymerase-mediated rolling-circle amplification, cloning and sequence analysis. The non-cultivated Gossypium species, including non-symptomatic plants, were found to harbor a much greater diversity of begomoviruses and satellites than found in the cultivated G. hirsutum. Furthermore an African cassava mosaic virus (a virus previously only identified in Africa) DNA-A component and a Jatropha curcas mosaic virus (a virus occurring only in southern India) DNA-B component were identified. Consistent with earlier studies of cotton in southern Asia, only a single species of betasatellite, CLCuMuB, was identified. The diversity of alphasatellites was much greater, with many previously unknown species, in the non-cultivated cotton species than in G. hirsutum. Inoculation of newly identified components showed them to be competent for symptomatic infection of Nicotiana benthamiana plants. The significance of the findings with respect to our understanding of the role of host selection in virus diversity in crops and the geographical spread of viruses by human activity are discussed.

  13. Soluble species in aerosols collected on the route of the Second Chinese National Arctic Research Expedition

    Institute of Scientific and Technical Information of China (English)

    Xu Jianzhong; Sun Junying; Ren Jiawen; Qin Dahe

    2005-01-01

    Aerosol samples are collected on the route of the Second Chinese National Arctic Research Expedition from July 15 to September 28, 2003. The concentration of water soluble ions (Na+, NH4+, Ca2+, CI-, MSA , SO42- and so on) are analyzed. By correlation analysis, the ions can be divided into three groups: ( 1 ) Na + ,Mg2+ , K + , Ca2 + , Cl- , SO42 - , mainly from sea salt; (2) NH4+ , NO3- , markedly from coastal regions of the continents ; (3) Acetate, MSA, C2042-, from other sources. Marine aerosols are the dominant origin, Cl- and Na + are the most dominant anion and cation, respectively and these two ions ( Na + + Cl - ) account for 55.6% of the total aerosol loading. The mean equivalence ratio of NH4+/SO42 - is 0.45,we suggest that ammonium and sulfate exist mainly as NH4HSO4. The concentration of NO3- shows three different patterns on the route of expedition: Japan Sea with meparison of the concentration of main water soluble ions between the First and Second Chinese National Arctic Research Expedition, the variation matches each other.

  14. Optimization of Endoglucanase Production from a Novel Bacterial Isolate, Arthrobacter sp. HPG166 and Characterization of Its Properties

    Directory of Open Access Journals (Sweden)

    Shengwei Huang

    2015-10-01

    Full Text Available ABSTRACTIn this study, a potential novel cellulolytic bacteriumArthrobacter sp. HPG166 was isolated from the hindgut of root-feeding larvaeHolotrichia parallela. Optimization of fermentation factors for endoglucanase production byArthrobacter sp. HPG166 was carried out via response surface methodology. Sodium carboxymethylcellulose 1.19% (w/v and beef extract 0.35% (w/v were the ideal combination of carbon and nitrogen sources for enzyme production; the optimum temperature and pH for cellulase production were 34°C and pH 8.0 respectively. Under the optimized fermentation conditions, the maximum endoglucanase activity of 1.411 U mL-1 was obtained. The crude endoglucanase was thermotolerant as it retained 50.31% of its activity after incubation at 70°C for an hour. Metal profile of the enzyme indicated that Mg2+ and Na+ were strong stimulators while Mn2+ and Co+ drastically inhibited its activity. Due to its particular characteristics, this enzyme could have potential for industrial applications.

  15. Optimization of four types of antimicrobial agents to increase the inhibitory ability of marine Arthrobacter oxydans KQ11 dextranase mouthwash

    Science.gov (United States)

    Ren, Wei; Wang, Shujun; Lü, Mingsheng; Wang, Xiaobei; Fang, Yaowei; Jiao, Yuliang; Hu, Jianen

    2016-03-01

    We adopted the response surface methodology using single factor and orthogonal experiments to optimize four types of antimicrobial agents that could inhibit biofilm formation by Streptococcus mutans, which is commonly found in the human oral cavity and causes tooth decay. The objective was to improve the function of marine Arthrobacter oxydans KQ11 dextranase mouthwash (designed and developed by our laboratory). The experiment was conducted in a three-level, four-variable central composite design to determine the best combination of ZnSO4, lysozyme, citric acid and chitosan. The optimized antibacterial agents were 2.16 g/L ZnSO4, 14 g/L lysozyme, 4.5 g/L citric acid and 5 g/L chitosan. The biofilm formation inhibition reached 84.49%. In addition, microscopic observation of the biofilm was performed using scanning electron microscopy and confocal laser scanning microscopy. The optimized formula was tested in marine dextranase Arthrobacter oxydans KQ11 mouthwash and enhanced the inhibition of S. mutans. This work may be promoted for the design and development of future marine dextranase oral care products.

  16. Multilocus sequence typing of a global collection of Pasteurella multocida isolates from cattle and other host species demonstrates niche association

    Directory of Open Access Journals (Sweden)

    Lainson F Alex

    2011-05-01

    Full Text Available Abstract Background Pasteurella multocida causes disease in many host species throughout the world. In bovids, it contributes to bovine respiratory disease (BRD and causes haemorrhagic septicaemia (HS. Previous studies have suggested that BRD-associated P. multocida isolates are of limited diversity. A multilocus sequence typing (MLST scheme for P. multocida was used to determine whether the low levels of diversity reported are due to the limited discriminatory power of the typing method used, restricted sample selection or true niche association. Bovine respiratory isolates of P. multocida (n = 133 from the UK, the USA and France, collected between 1984 and 2008 from both healthy and clinically affected animals, were typed using MLST. Isolates of P. multocida from cases of HS, isolates from other host species and data from the MLST database were used as comparison. Results Bovine respiratory isolates were found to be clonal (ISA 0.45 with 105/128 belonging to clonal complex 13 (CC13. HS isolates were not related to bovine respiratory isolates. Of the host species studied, the majority had their own unique sequence types (STs, with few STs being shared across host species, although there was some cross over between porcine and bovine respiratory isolates. Avian, ovine and porcine isolates showed greater levels of diversity compared to cattle respiratory isolates, despite more limited geographic origins. Conclusions The homogeneity of STs of bovine respiratory P. multocida observed, and the differences between these and P. multocida subpopulations from bovine non-respiratory isolates and non-bovine hosts may indicate niche association.

  17. Regulation of methylamine and formaldehyde metabolism in Arthrobacter P1. Formaldehyde is the inducing signal for the synthesis of the RuMP cycle enzyme hexulose phosphate synthase

    NARCIS (Netherlands)

    Croes, L.M.; Dijkhuizen, L.

    1986-01-01

    The inducing potential of formaldehyde on the synthesis of hexulose phosphate synthase, a key enzyme of the RuMP cycle in Arthrobacter P1, was investigated in resting cell suspensions. Induction of this enzyme only occurred at formaldehyde concentrations of 0.5 mM and below. No evidence was obtained

  18. Deep-sea shrimps of the genus Bythocaris G.O. Sars in the collections of Russian museums, with the description of a new species (Crustacea: Decapoda: Hippolytidae)

    NARCIS (Netherlands)

    Sokolov, V.

    2000-01-01

    The collections of Bythocaris in Russian museums and research institutes were studied. Three species, B. biruli Kobjakova, 1964, B. curvirostris Kobjakova, 1957 and B. irene Retovsky, 1946, are redescribed, and a new species, B. kobjakovae spec. nov. is described. The intra-specific variation of six

  19. Distribution of vibrio species in shellfish and water samples collected from the atlantic coastline of south-east Nigeria.

    Science.gov (United States)

    Eyisi, Onyedikachukwu A L; Nwodo, Uchechukwu U; Iroegbu, Christian U

    2013-09-01

    Crayfish, lobster, and sea-water samples collected from five fishing islands on the Atlantic coast-Bight of Biafra (Bonny)-belonging to Ibaka Local Government Area of Akwa-Ibom State of Nigeria were bacteriologically evaluated on thiosulphate citrate bile-salt sucrose (TCBS) agar for Vibrio load and pathotypes. Mean log10 Vibrio counts of 7.64+/-2.78 cfu/g (in crayfish), 5.07+/-3.21 cfu/g (in lobster), and 3.06+/-2.27 cfu/mL (in sea-water) were obtained in rainy season (June-July) while counts in the dry season (November-December) were 6.25+/-1.93 cfu/g, 5.99+/-1.54 cfu/g, and 3.84+/-1.78 cfu/mL respectively. The physicochemical measurements (temperature, pH, and total dissolved solutes) of the sea-water did not vary significantly in the two seasons across all five islands. Vibrio species isolated were Vibrio cholerae (both O1 and non-O1 serotypes), V parahaemolyticus, V vulnificus, V mimicus, and V fluvialis. Both Ogawa and Inaba subtypes of V cholerae O1 serotype were found. In addition, the Hikojima subtype, which had not been previously reported in the region, was isolated in two samples. The results show that these Vibrio species are endemic in the area.

  20. On a collection of Peruvian Neniinae (Mollusca: Gastropoda: Clausiliidae), with a check-list and a provisional key to all the Peruvian species known

    NARCIS (Netherlands)

    Loosjes, F.E.; Loosjes-van Bemmel, A.C.W.

    1984-01-01

    An annotated list is given of all Neniinae collected in 1975 by Dr. A. S. H. Breure in Peru. The localities that have been visited are also listed, together with the Neniinae collected there. Pseudogracilinenia gen. nov. is described for P. huallagana (Pilsbry, 1949) (type-species) and P.jolyi (O. B

  1. Physicochemical factors for affecting the efficiency of Arthrobacter chlorophenolicus MN1409 on manganese oxidation%理化因素对锰细菌Arthrobacter chlorophenolicus MN1409氧化Mn2+的影响

    Institute of Scientific and Technical Information of China (English)

    冯福鑫; 王芳; 许旭萍

    2012-01-01

    Arthrobacter chlorophenolicus MN1409是1株分离自锰矿样品的高效锰氧化细菌.为了建立该菌株氧化Mn2+的适宜条件,研究了接种量、装液量、摇床转速、温度、pH值、Fe2+初始质量浓度和Mn2+初始质量浓度等理化因素对其锰氧化效率的影响.结果表明,接种量、装液量、转速和Mn2+初始质量浓度在一定范围内变化对锰氧化率影响不大;而温度、pH值和Fe2+初始质量浓度变化对锰氧化率有较大影响.当接种量为4%,装液量为60mL,温度为25℃,摇床转速为100r/min,pH值为7,且有一定的Fe2+存在时,Arthrobacter chlorophenolicus MN1409对锰的氧化效率最高.%The physicochemical factors for affecting the manganese oxidation efficiency of an manganese oxidizing bacteria named Arthrobacter chlorophennlicus MN1409 which was isolated from manganese ore sample were studied. The identified factors include inoculum volume, liquid volume, temperature, shaking speed, pH as well as the concentration of Fe2+ and Mn2+ . The results showed that there was no significant effect on the biological manganese oxidation rate and chemical manganese oxidation rate during 2% - 10% inoculum volumes. 4% inoculum volume was the optimum condition according to its highest total manganese oxidation rate. Similarly, biological and chemical manganese oxidation rale have no significant difference for the liquid volume ranging from 50 mL to 100 mL in 250 mL triangular flask , the highest total manganese oxidation rate occurred in 60 mL liquid volume. Nevertheless, temperature showed an positive effect on manganese oxidation rate. By increasing the temperature from 15 ℃ to 35 ℃, highest biological and chemical manganese oxidation rate could be reached at 25 ℃ and 35 ℃ , respectively, plus the total oxidation rate could achieved 81.52% as well in 35 ℃ . In addition, the effect of shaker speed on manganese oxidation efficiency (MOE) showed that the oxidation rates were similar for

  2. Life history correlates of fecal bacterial species richness in a wild population of the blue tit Cyanistes caeruleus.

    Science.gov (United States)

    Benskin, Clare McW H; Rhodes, Glenn; Pickup, Roger W; Mainwaring, Mark C; Wilson, Kenneth; Hartley, Ian R

    2015-02-01

    Very little is known about the normal gastrointestinal flora of wild birds, or how it might affect or reflect the host's life-history traits. The aim of this study was to survey the species richness of bacteria in the feces of a wild population of blue tits Cyanistes caeruleus and to explore the relationships between bacterial species richness and various life-history traits, such as age, sex, and reproductive success. Using PCR-TGGE, 55 operational taxonomic units (OTUs) were identified in blue tit feces. DNA sequencing revealed that the 16S rRNA gene was amplified from a diverse range of bacteria, including those that shared closest homology with Bacillus licheniformis, Campylobacter lari, Pseudomonas spp., and Salmonella spp. For adults, there was a significant negative relationship between bacterial species richness and the likelihood of being detected alive the following breeding season; bacterial richness was consistent across years but declined through the breeding season; and breeding pairs had significantly more similar bacterial richness than expected by chance alone. Reduced adult survival was correlated with the presence of an OTU most closely resembling C. lari; enhanced adult survival was associated with an OTU most similar to Arthrobacter spp. For nestlings, there was no significant change in bacterial species richness between the first and second week after hatching, and nestlings sharing the same nest had significantly more similar bacterial richness. Collectively, these results provide compelling evidence that bacterial species richness was associated with several aspects of the life history of their hosts.

  3. Species of the subfamily Triatominae Jeannel, 1919 (Hemiptera: Reduviidae present in the Collection of Chagas Disease Vectors (FIOCRUZ-COLVEC, State of Minas Gerais

    Directory of Open Access Journals (Sweden)

    Rita de Cássia Moreira de Souza

    2014-12-01

    Full Text Available Introduction Biological collections are depositories of information on different species and contribute to the knowledge, protection, conservation and maintenance of biodiversity. Methods A list of triatomine species currently included in the Collection of Chagas Disease Vectors (FIOCRUZ-COLVEC was prepared from the database made available by the Reference Center on Environmental Information. Results COLVEC curatorship houses 4,778 specimens of triatomines, of which 811 come from other American countries (Argentina, Bolivia, Colombia, Costa Rica, the United States of America, Guatemala, Mexico, Peru, Uruguay and Venezuela and 3,967 are autochthonous from Brazil. Altogether, 56 species of Chagas disease vectors are represented in the COLVEC: two species of the Tribe Cavernicolini Usinger, 1944; fifteen species of the tribe Rhodniini Pinto, 1926, of which 12 are of the genus Rhodnius and 3 are of the genus Psamolestes; and 39 species of the tribe Triatomini Jeannel, 1919, represented by the genus Dipetalogaster, two species of the genus Eratyrus, two of the genus Meccus, seven of the genus Panstrongylus and 27 of the genus Triatoma. Conclusions This list provides important data on the diversity of triatomines currently included in COLVEC, including the expanded area of Panstrongylus lutzi occurrence in the municipalities Pirapora and Januária, State of Minas Gerais. The maintenance and expansion of the collection ensures the preservation of biodiversity and further studies.

  4. Observation of particle-species dependence and collectivity in azimuthal correlations of pp collisions at the LHC

    CERN Document Server

    CMS Collaboration

    2016-01-01

    Measurements of two- and multi-particle angular correlations in pp collisions at $\\sqrt{s} = 5$, $7$, and $13~\\mathrm{TeV}$ are presented as a function of charged-particle multiplicity. The data, corresponding to an integrated luminosity of $1.0~\\mathrm{pb}^{-1}$ ($5~\\mathrm{TeV}$), $6.2~\\mathrm{pb}^{-1}$ ($7~\\mathrm{TeV}$), and $0.7~\\mathrm{pb}^{-1}$ ($13~\\mathrm{TeV}$), were collected using the CMS detector at the LHC. The second-order ($v_2$) and third-order ($v_3$) azimuthal anisotropy harmonics of unidentified charged particles, as well as $v_2$ of $\\text{K}_{\\text{S}}^{0}$ and $\\Lambda$/$\\overline{\\Lambda}$ particles, are extracted from long-range two-particle correlations as functions of particle multiplicity and transverse momentum, after correcting for the contribution of back-to-back jet correlations. A clear particle-species dependence of $v_2$ is observed for high-multiplicity pp events (e.g., with more than 105 charged particles produced within $|\\eta|<2.4$) at $\\sqrt{s} = 13~\\mathrm{TeV}$. Fo...

  5. [Microphallidae Travassos, 1920 (Trematoda). XXXIII. Apropos of 11 species described or collected by P. Oschmarin in the Far East (author's transl)].

    Science.gov (United States)

    Deblock, S

    1975-01-01

    The collection of the Microphallidae collected by P. Oschmarin includes the following species: 1) Maritrema magnicirrus, M. gratiosum, Maritrema sp.; 2) Basantisia halcyonae, B. longa, B. ramai -- Belopolskiella prolecithum; 3) Microphallus oviformis; 4) Levinseniella acanthophalla, L. bucephalae tringae; 5) Spiculotrema littoralis. The writer describes and illustrates the anatomy of several of those species; consequently he proposes the following changes of systematic: 1) Maritrema gratiosum sensu Oschmarin is a new species: Maritrema (Maritrema) chiriacae; the Maritrema sp. could be M. sachalinicum Schumakowitsch; 2) The genus Belopolskiella and Basantisia are synonymous; the species prolecithum and longa are synonymous. Besides B. prolecithum and B. tamsuiensis could be synonymous but it is not proved; 3) L. acanthophalla and L. bucephalae tringae are both synonimisided with L. bucephalae Yamaguti, 1939.

  6. Intertidal Species Inventory and Quantitative Data Collected on Oahu and Maui during 2001-2005 (NODC Accession 0002447)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Two types of data sets generated by our project: species inventories and quantitative counts of key organisms. The species inventories are a compilation of data...

  7. Intertidal species inventory and quantitative data collected on Oahu and Maui, Islands of Hawaii during 2001 - 2005 (NODC Accession 0002447)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Two types of data sets generated by our project: species inventories and quantitative counts of key organisms. The species inventories are a compilation of data...

  8. New Report of Two Species of Crabs, Cycloes granulosa and Pugettia vulgaris (Crustacea: Decapoda Collected from Korea

    Directory of Open Access Journals (Sweden)

    Yang, Kea Cheong

    2015-07-01

    Full Text Available Two species of crabs, Cycloes granulosa and Pugettia vulgaris, are described and illustrated for the first time in Korea. The former is the first species of calappoid genus Cycloes and characterized by having a minute lateral spine on the margin of carapace. The latter is a species of majoid crab and similar to P. pellucens. However, it can be distinguished by shorter rostral spines, a smaller hepatic spine, and a carapace entirely covered with short setae. In Korea the calappoid crab now includes seven species of three genera (Calappa, Mursia, and Cycloes and the majoid genus Pugettia consists of six species.

  9. New collections of freshwater crabs from northern Madagascar, with the description of a new species of Foza Reed & Cumberlidge, 2006 (Brachyura, Potamonautidae, and comments on their conservation status

    Directory of Open Access Journals (Sweden)

    Neil Cumberlidge

    2015-01-01

    Full Text Available We report here on recent collections of freshwater crabs from Antsiranana Province, northern Madagascar. The specimens belong to three species, one of which is new to science and is described here. This raises the number of species of freshwater crabs found in Madagascar to 17. All are endemic to the island and all belong to the Afrotropical family Potamonautidae Bott, 1970. The new species, Foza manonae sp. nov., is compared to other species in this genus, and an updated key is provided. It is distinguished from the other three congeners by characters of the male first gonopod, sternum, carapace, and cheliped. The conservation status of the Malagasy freshwater crab fauna is summarized and discussed in light of the new material reported on here belonging to two other species, Madagapotamon humberti Bott, 1965 and Foza ambohitra Cumberlidge & Meyer, 2009.

  10. Alleviating salt stress in tomato seedlings using Arthrobacter and Bacillus megaterium isolated from the rhizosphere of wild plants grown on saline-alkaline lands.

    Science.gov (United States)

    Fan, Pengfei; Chen, Daitao; He, Yanan; Zhou, Qingxia; Tian, Yongqiang; Gao, Lihong

    2016-11-01

    Salt-induced soil degradation is common in farmlands and limits the growth and development of numerous crop plants in the world. In this study, we isolated salt-tolerant bacteria from the rhizosphere of Tamarix chinensis, Suaeda salsa and Zoysia sinica, which are common wild plants grown on a saline-alkaline land, to test these bacteria's efficiency in alleviating salt stress in tomato plants. We screened out seven strains (TF1-7) that are efficient in reducing salt stress in tomato seedlings. The sequence data of 16S rRNA genes showed that these strains belong to Arthrobacter and Bacillus megaterium. All strains could hydrolyze casein and solubilize phosphate, and showed at least one plant growth promotion (PGP)-related gene, indicating their potential in promoting plant growth. The Arthrobacter strains TF1 and TF7 and the Bacillus megaterium strain TF2 and TF3 could produce indole acetic acid under salt stress, further demonstrating their PGP potential. Tomato seed germination, seedling length, vigor index, and plant fresh and dry weight were enhanced by inoculation of Arthrobacter and B. megaterium strains under salt stress. Our results demonstrated that salt-tolerant bacteria isolated from the rhizosphere of wild plants grown on saline-alkaline lands could be used for alleviating salt stress in crop plants. PMID:27196364

  11. The dynamics of questing ticks collected for 164 consecutive months off the vegetation of two landscape zones in the Kruger National Park (1988-2002). Part III. The less commonly collected species.

    Science.gov (United States)

    Gallivan, Gordon J; Spickett, Andrea; Heyne, Heloise; Spickett, Arthur M; Horak, Ivan G

    2011-04-19

    Despite many studies regarding tick ecology, limited information on long-term changes in tick populations exist. This study assessed the long-term population dynamics of the less frequently collected questing ixodid ticks in the Kruger National Park (KNP). From 1988 to 2002, monthly dragging of the vegetation was performed in three habitats (grassland, woodland and gully) at two sites in the KNP (Nhlowa Road, Landscape Zone 17, and Skukuza, Landscape Zone 4). Amblyomma marmoreum and Rhipicephalus evertsi evertsi were collected as larvae most commonly. Most A. marmoreum larvae were collected at Skukuza and numbers peaked from March to July. More R. evertsi evertsi larvae were collected at Nhlowa Road and numbers peaked in summer and in winter, while at Skukuza there was a single peak in spring. Haemaphysalis elliptica, Rhipicephalus simus and Rhipicephalus turanicus were collected as adults most commonly. More Ha. elliptica and R. turanicus were collected at Nhlowa Road than at Skukuza, while R. simus numbers from the two sites were approximately equal. Ha. elliptica were collected most often between February and June, and R. simus and R. turanicus during February and March. All three species were collected more frequently in gullies than in grassland or woodland. Their numbers increased in 1994/1995 following an eruption of rodents, the preferred hosts of the immature stages. The different host-seeking strategies of ticks largely determine the development stage at which they are likely to be collected during vegetation dragging and reflect a complex interaction between ticks, their hosts and the environment.

  12. Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

    OpenAIRE

    Léger Patrick; Cabane Cyril; Abadie Pierre; Derory Jérémy; Brendel Oliver; Murat Florent; Abrouk Michael; Salse Jérôme; Salin Franck; Frigerio Jean-Marc; Noirot Céline; Klopp Christophe; Léger Valérie; Le Provost Grégoire; Ueno Saneyoshi

    2010-01-01

    Abstract Background The Fagaceae family comprises about 1,000 woody species worldwide. About half belong to the Quercus family. These oaks are often a source of raw material for biomass wood and fiber. Pedunculate and sessile oaks, are among the most important deciduous forest tree species in Europe. Despite their ecological and economical importance, very few genomic resources have yet been generated for these species. Here, we describe the development of an EST catalogue that will support e...

  13. Evaluation of Arthrobacter aurescens Strain TC1 as Bioaugmentation Bacterium in Soils Contaminated with the Herbicidal Substance Terbuthylazine.

    Directory of Open Access Journals (Sweden)

    Vera P Silva

    Full Text Available In the last years the chloro-s-triazine active substance terbuthylazine has been increasingly used as an herbicide and may leave residues in the environment which can be of concern. The present study aimed at developing a bioaugmentation tool based on the soil bacterium Arthrobacter aurescens strain TC1 for the remediation of terbuthylazine contaminated soils and at examining its efficacy for both soil and aquatic compartments. First, the feasibility of growing the bioaugmentation bacterium inocula on simple sole nitrogen sources (ammonium and nitrate instead of atrazine, while still maintaining its efficiency to biodegrade terbuthylazine was shown. In sequence, the successful and quick (3 days bioremediation efficacy of ammonium-grown A. aurescens TC1 cells was proven in a natural soil freshly spiked or four-months aged with commercial terbuthylazine at a dose 10× higher than the recommended in corn cultivation, to mimic spill situations. Ecotoxicity assessment of the soil eluates towards a freshwater microalga supported the effectiveness of the bioaugmentation tool. Obtained results highlight the potential to decontaminate soil while minimizing terbuthylazine from reaching aquatic compartments via the soil-water pathway. The usefulness of this bioaugmentation tool to provide rapid environment decontamination is particularly relevant in the event of accidental high herbicide contamination. Its limitations and advantages are discussed.

  14. Production of Xylanase from Arthrobacter sp. MTCC 6915 Using Saw Dust As Substrate under Solid State Fermentation

    Directory of Open Access Journals (Sweden)

    Sevanan Murugan

    2011-01-01

    Full Text Available Saw dust was used as substrate for xylanase production from Arthrobacter sp. MTCC 6915. The study of period of incubation, temperature, pH, carbon, and nitrogen sources for xylanase production was optimized. Xylanase production was found to be optimum at an incubation period of 96 hrs (117.0 U/mL, temperature 30°C (105.0 U/mL, and pH 9.0 (102.9 U/mL. The results showed that the xylanase production was found to be higher in the presence of carboxymethylcellulose (176.4 U/mL and dextrose (126.0 U/mL. It was also observed that peptone (170.1 U/mL and beef extract (161.7 U/mL supported maximum xylanase production.The enzyme was characterized and found to be fairly active at pH 9 (764.4 U/mL and temperature 60°C (819 U/mL. Even in the present study, a major difference in the production temperature (30°C and optimal temperature (60°C of the enzyme activity was observed. However, the pH of the production media and the enzyme activity were found to be the same (pH 9.

  15. Evaluation of Arthrobacter aurescens Strain TC1 as Bioaugmentation Bacterium in Soils Contaminated with the Herbicidal Substance Terbuthylazine.

    Science.gov (United States)

    Silva, Vera P; Moreira-Santos, Matilde; Mateus, Carla; Teixeira, Tânia; Ribeiro, Rui; Viegas, Cristina A

    2015-01-01

    In the last years the chloro-s-triazine active substance terbuthylazine has been increasingly used as an herbicide and may leave residues in the environment which can be of concern. The present study aimed at developing a bioaugmentation tool based on the soil bacterium Arthrobacter aurescens strain TC1 for the remediation of terbuthylazine contaminated soils and at examining its efficacy for both soil and aquatic compartments. First, the feasibility of growing the bioaugmentation bacterium inocula on simple sole nitrogen sources (ammonium and nitrate) instead of atrazine, while still maintaining its efficiency to biodegrade terbuthylazine was shown. In sequence, the successful and quick (3 days) bioremediation efficacy of ammonium-grown A. aurescens TC1 cells was proven in a natural soil freshly spiked or four-months aged with commercial terbuthylazine at a dose 10× higher than the recommended in corn cultivation, to mimic spill situations. Ecotoxicity assessment of the soil eluates towards a freshwater microalga supported the effectiveness of the bioaugmentation tool. Obtained results highlight the potential to decontaminate soil while minimizing terbuthylazine from reaching aquatic compartments via the soil-water pathway. The usefulness of this bioaugmentation tool to provide rapid environment decontamination is particularly relevant in the event of accidental high herbicide contamination. Its limitations and advantages are discussed. PMID:26662024

  16. TIME DEPENDENT ACCUMULATION OF NICOTINE DERIVATIVES IN THE CULTURE MEDIUM OF ARTHROBACTER NICOTINOVORANS pAO1

    Directory of Open Access Journals (Sweden)

    Răzvan Ștefan Boiangiu

    2014-12-01

    Full Text Available Previous studies have shown that the metabolic intermediate 6-hidroxy-D-nicotine (6HNic found in the Arthrobacter nicotinovorans pAO1+ nicotine catabolic pathway has the ability to bind nicotinic acetylcholine receptors and to sustain spatial memory in rats. These properties make 6HNic a valuable compound with some potential for medical applications, thereby a suitable, simple and efficient method for producing 6-hidroxy-D-nicotine is necessary. Here, we focus on identifying the best moment for harvesting A. nicotinovorans cells in order to directly convert nicotine to 6HNic with the best yield.  The growth of  A. nicotinovorans pAO1+ was monitored and the correlation between the growth phases and nicotine metabolism was established. After about 5 hours of lag,the strain entered the log phase and was fully grown after 10 hours. The nicotine concentration began to drop dramatically as the pAO1+ culture reached saturation and was depleted in 5 hours. As the nicotine concentration dropped, 6HNic began to accumulate, reaching the maximum levels after about 11 hours of growth. Two other products could be detected by HPLC, one which was identified as the nicotine-blue (NB pigment and a second a still unknown end-product. 

  17. Evaluation of 4-bromophenol biodegradation in mixed pollutants system by Arthrobacter chlorophenolicus A6 in an upflow packed bed reactor.

    Science.gov (United States)

    Sahoo, Naresh Kumar; Pakshirajan, Kannan; Ghosh, Pranab Kumar

    2014-09-01

    Bromophenol is listed as priority pollutant by U.S. EPA, however, there is no report so far on its removal in mixed pollutants system by any biological reactor operated in continuous mode. Furthermore, bromophenol along with chlorophenol and nitrophenol are usually the major constituents of paper pulp and pesticide industrial effluent. The present study investigated simultaneous biodegradation of these three pollutants with specially emphasis on substrate competition and crossed inhibition by Arthrobacter chlorophenolicus A6 in an upflow packed bed reactor (UPBR). A 2(3) full factorial design was employed with these pollutants at two different levels by varying their influent concentration in the range of 250-450 mg l(-1). Almost complete removal of all these pollutants and 97 % effluent toxicity removal were achieved in the UPBR at a pollutant loading rate of 1707 mg l(-1) day(-1) or lesser. However, at higher loading rates, the reactor performance deteriorated due to transient accumulation of toxic intermediates. Statistical analysis of the results revealed a strong negative interaction of 4-CP on 4-NP biodegradation. On the other hand, interaction effect between 4-CP and 4-BP was found to be insignificant. Among these three pollutants 4-NP preferentially degraded, however, 4-CP exerted more inhibitory effect on 4-NP biodegradation. This study demonstrated the potential of A. chlorophenolicus A6 for biodegradation of 4-BP in mixed pollutants system by a flow through UPBR system. PMID:24934870

  18. Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds.

    Science.gov (United States)

    Scheublin, Tanja R; Deusch, Simon; Moreno-Forero, Silvia K; Müller, Jochen A; van der Meer, Jan Roelof; Leveau, Johan H J

    2014-07-01

    Arthrobacter chlorophenolicus A6 is a Gram-positive, 4-chlorophenol-degrading soil bacterium that was recently shown to be an effective colonizer of plant leaf surfaces. The genetic basis for this phyllosphere competency is unknown. In this paper, we describe the genome-wide expression profile of A.chlorophenolicus on leaves of common bean (Phaseolus vulgaris) compared with growth on agar surfaces. In phyllosphere-grown cells, we found elevated expression of several genes known to contribute to epiphytic fitness, for example those involved in nutrient acquisition, attachment, stress response and horizontal gene transfer. A surprising result was the leaf-induced expression of a subset of the so-called cph genes for the degradation of 4-chlorophenol. This subset encodes the conversion of the phenolic compound hydroquinone to 3-oxoadipate, and was shown to be induced not only by 4-chlorophenol but also hydroquinone, its glycosylated derivative arbutin, and phenol. Small amounts of hydroquinone, but not arbutin or phenol, were detected in leaf surface washes of P.vulgaris by gas chromatography-mass spectrometry. Our findings illustrate the utility of genomics approaches for exploration and improved understanding of a microbial habitat. Also, they highlight the potential for phyllosphere-based priming of bacteria to stimulate pollutant degradation, which holds promise for the application of phylloremediation. PMID:24373130

  19. The suitability of the Triple trap for the collection of South African livestock-associated Culicoides species

    Directory of Open Access Journals (Sweden)

    Gert J. Venter

    2013-02-01

    Full Text Available The relatively large number of Culicoides midges (Diptera: Ceratopogonidae that can be collected with a light trap makes it the most widely used tool for this purpose. However, the majority of these traps were originally designed for collecting mosquitoes. The evaluation and improvement of traps to increase their effectiveness in collecting Culicoides midges will unavoidably form part of research on these insects. In the present study the efficiency of the Triple trap for collecting livestock-associated Culicoides midges was compared with that of the Onderstepoort 220 V, the BG-sentinel and the mini-CDC traps. A unique feature of the Triple trap is that selected surfaces are coated with TiO2 (titanium dioxide which, in the presence of ultra violet light, acts as a photo-catalyser to produce CO2, which in turn may attract blood-feeding insects. Overall, the Onderstepoort trap collected significantly higher numbers of midges than the others. Relative efficiency varied between different occasions and under some conditions, for example periods with low midge abundance during the winter, the mean numbers collected with the Triple trap did not differ significantly from those of the Onderstepoort or BG-sentinel traps. By replacing the collection chamber of the Triple trap with a sock and beaker, similar to that of the Onderstepoort trap, it can effectively be used for the collection of Culicoides midges.

  20. Harvest Records for Game Species Collected at Hillside, Mathews Brake, and Morgan Brake National Wildlife Refuges from 1998 to 2002

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — These harvest records were taken by Refuge employees at check stations between 1998 and 2002 involving archery, muzzle loading, and multiple game species

  1. Species identification and other data collected from visual observation and other data from AIRCRAFT in the Puget Sound from 23 May 1978 to 31 October 1978 (NODC Accession 7900174)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Species identification and other data were collected using visual observation and other instruments from AIRCRAFT in the Puget Sound. Data were collected from 23...

  2. The dynamics of questing ticks collected for 164 consecutive months off the vegetation of two landscape zones in the Kruger National Park (1988–2002. Part III. The less commonly collected species

    Directory of Open Access Journals (Sweden)

    Gordon J. Gallivan

    2011-02-01

    Full Text Available Despite many studies regarding tick ecology, limited information on long-term changes in tick populations exist. This study assessed the long-term population dynamics of the less frequently collected questing ixodid ticks in the Kruger National Park (KNP. From 1988 to 2002, monthly dragging of the vegetation was performed in three habitats (grassland, woodland and gully at two sites in the KNP (Nhlowa Road, Landscape Zone 17, and Skukuza, Landscape Zone 4. Amblyomma marmoreum and Rhipicephalus evertsi evertsi were collected as larvae most commonly. Most A. marmoreum larvae were collected at Skukuza and numbers peaked from March to July. More R. evertsi evertsi larvae were collected at Nhlowa Road and numbers peaked in summer and in winter, while at Skukuza there was a single peak in spring. Haemaphysalis elliptica, Rhipicephalus simus and Rhipicephalus turanicus were collected as adults most commonly. More Ha. elliptica and R. turanicus were collected at Nhlowa Road than at Skukuza, while R. simus numbers from the two sites were approximately equal. Ha. elliptica were collected most often between February and June, and R. simus and R. turanicus during February and March. All three species were collected more frequently in gullies than in grassland or woodland. Their numbers increased in 1994/1995 following an eruption of rodents, the preferred hosts of the immature stages. The different host-seeking strategies of ticks largely determine the development stage at which they are likely to be collected during vegetation dragging and reflect a complex interaction between ticks, their hosts and the environment.

  3. The genus Aphidura (Hemiptera, Aphididae in the collection of the Muséum national d’Histoire naturelle of Paris, with six new species

    Directory of Open Access Journals (Sweden)

    Juan M. Nieto Nafría

    2013-07-01

    Full Text Available Specimens were studied of 65 samples of the genus Aphidura (Aphididae, Aphidinae, Macrosiphini from the collection of the Muséum national d’Histoire naturelle (Paris. The possible synonymies of three pairs of species are discussed. New aphid host plant relationships are reported for A. bozhkoae, A. delmasi, A. ornata, A. pannonica and A. picta; this last species is recorded for first time from Afghanistan. The record of A. pujoli from Pakistan is refuted. The fundatrices, oviparous females and males of A. delmasi are described. Six new species are established: A. gallica sp. n. and A. amphorosiphon sp. n. from specimens caught on species of Silene (Caryophyllaceae from France and Iran, respectively, A. pakistanensis sp. n., A. graeca sp. n. and A. urmiensis sp. n. from specimens caught on species of Dianthus, Gypsophila and Spergula (Caryophyllaceae from Pakistan, Greece and Iran, respectively, and A. iranensis sp. n. from specimens caught on Prunus sp. from Iran. Modifications are made to the keys by Blackman and Eastop to aphids living on Dianthus, Gypsophyla, Silene, Spergula and Prinsepia and Prunus (Rosaceae. An identification key to apterous viviparous females of species of Aphidura is also provided.

  4. Isolation and characterization of atrazine-degrading Arthrobacter sp. AD26 and use of this strain in bioremediation of contaminated soil

    Institute of Scientific and Technical Information of China (English)

    LI Qingyan; LI Ying; ZHU Xikun; CAI Baoli

    2008-01-01

    A bacterial strain (AD26) capable of utilizing atrazine as a sole nitrogen source for growth was isolated from an industrial wastewatersample by enrichment culture. The 16S rRNA gene sequencing identified AD26 as anArthrobacter sp. PCR assays indicated that AD26contained atrazine-degrading genes trzN and atzBC. The trzN gene of AD26 only differs from the trzN ofArthrobacter aurescens TC1by one base (A→T at 907) and one amino acid (Met→Leu at 303). The specific activity of trzN of AD26 in crude cell extract was0.28 U/mg, which was 1.2 times that of TC 1. This strain has shown faster growth and atrazine-degradation rates in atrazine-containingminimal media than two well characterized atrazine-degrading bacteria, Pseudomonas sp. ADP and Arthrobacter aurescens TC 1. Afterincubating for 48 h at 30℃, the OD600 of AD26 reached 2.6 compared with 1.33 of ADP. AD26 was capable of degrading 500 mg/Lof atrazine in minimal medium at 95% in 72 h, while the degradative rates by TC1 and ADP were only 90% and 86%, respectively. Abioremediation trial of contaminated soil has indicated that AD26 can degrade as high as 98% of atrazine contained in soil (300 mg/kg)after incubating for 20 d at 26℃, nominating this strain as a good candidate for use in bioremediation programs.

  5. Applying the collective impact approach to address non-native species: A case study of the Great Lakes Phragmites Collaborative

    Science.gov (United States)

    Braun, H. B.; Kowalski, Kurt P.; Hollins, K.

    2016-01-01

    To address the invasion of non-native Phragmites in the Great Lakes, researchers at the U.S. Geological Survey—Great Lakes Science Center partnered with the Great Lakes Commission in 2012 to establish the Great Lakes Phragmites Collaborative (GLPC). The GLPC is a regional-scale partnership established to improve collaboration among stakeholders and increase the effectiveness of non-native Phragmites management and research. Rather than forming a traditional partnership with a narrowly defined goal, the GLPC follows the principles of collective impact to engage stakeholders, guide progress, and align resources to address this complex, regional challenge. In this paper, the concept and tenets of collective impact are described, the GLPC is offered as a model for other natural resource-focused collective impact efforts, and steps for establishing collaboratives are presented. Capitalizing on the interactive collective impact approach, the GLPC is moving toward a broadly accepted common agenda around which agencies and individuals will be able to better align their actions and generate measureable progress in the regional campaign to protect healthy, diverse ecosystems from damage caused by non-native Phragmites.

  6. Enhanced U(VI) release from autunite mineral by aerobic Arthrobacter sp. in the presence of aqueous bicarbonate

    Energy Technology Data Exchange (ETDEWEB)

    Katsenovich, Yelena; Carvajal, Denny A.; Wellman, Dawn M.; Lagos, Leonel

    2012-04-20

    The bacterial effect on U(VI) leaching from the autunite mineral (Ca[(UO{sub 2})(PO{sub 4})]{sub 2} {center_dot} 3H{sub 2}O) was investigated to provide a more comprehensive understanding into important microbiological processes affecting autunite stability within subsurface bicarbonate-bearing environments. Experiments were performed in a culture of G975 Arthrobacter oxydans strain, herein referred to as G975, a soil bacterium previously isolated from Hanford Site soil. 91 mg of autunite powder and 50 mL of phosphorus-limiting sterile media were amended with bicarbonate ranging between 1-10 mM in glass reactor bottles and inoculated with G975 strain after the dissolution of autunite was at steady state. SEM observations indicated G975 formed a biofilm on the autunite surface and penetrated the mineral cleavages. The mineral surface colonization by bacteria tended to increase concomitantly with bicarbonate concentrations. Additionally, a sterile cultureware with inserts was used in non-contact bioleaching experiments where autunite and bacteria cells were kept separately. The data suggest the G975 bacteria is able to enhance U(VI) leaching from autunite without the direct contact with the mineral. In the presence of bicarbonate, the damage to bacterial cells caused by U(VI) toxicity was reduced, yielding similar values for total organic carbon (TOC) degradation and cell density compared to U(VI)-free controls. The presence of active bacterial cells greatly enhanced the U(VI) bioleaching from autunite in bicarbonate-amended media.

  7. Enhanced U(VI) release from autunite mineral by aerobic Arthrobacter sp. in the presence of aqueous bicarbonate

    Energy Technology Data Exchange (ETDEWEB)

    Katsenovich, Yelena P.; Carvajal, Denny A.; Wellman, Dawn M.; Lagos, Leonel E.

    2012-05-01

    The bacterial effect on U(VI) release from the autunite mineral (Ca[(UO2)(PO4)]2•3H2O) was investigated to provide a more comprehensive understanding of the important microbiological processes affecting autunite stability within subsurface bicarbonate-bearing environments. Experiments were performed in a culture of the Arthrobacter oxydans G975 strain, herein referred to as G975, a soil bacterium previously isolated from Hanford Site soil. 91 mg of autunite powder and 50 mL of phosphorous-limiting sterile media were amended with bicarbonate (ranging between 1 and 10 mM) in glass reactor bottles and inoculated with the G975 strain after the dissolution of autunite was at steady state. SEM observations indicated that G975 formed a biofilm on the autunite surface and penetrated the mineral cleavages. The mineral surface colonization by bacteria tended to increase concomitantly with bicarbonate concentrations. Additionally, a sterile culture-ware with inserts was used in non-contact dissolution experiments where autunite and bacteria cells were kept separately. The data suggest that G975 bacteria is able to enhance the release of U(VI) from autunite without direct contact with the mineral. In the presence of bicarbonate, the damage to bacterial cells caused by U(VI) toxicity was reduced, yielding similar values for total organic carbon (TOC) degradation and cell density compared to U(VI)-free controls. The presence of active bacterial cells greatly enhanced the release of U(VI) from autunite in bicarbonate-amended media.

  8. Proizvodnja β-fruktofuranozidaze s pomoću bakterije Arthrobacter sp. i primjena tog enzima u pretvorbi steviozida i rebaudiozida A

    OpenAIRE

    Xu, Zhong-Wei; Li, Yu-Qiang; Wang, Yong-Hua; Yang, Bo; Ning, Zheng-Xiang

    2009-01-01

    U proizvodnji enzima β-fruktofuranozidaze upotrijebljen je soj bakterije Arthrobacter sp. 10137. Kao najbolji izvori ugljika i dušika za proizvodnju enzima u pokusu na tresilici upotrijebljeni su saharoza i kukuruzni ekstrakt u omjeru 10:1. Maksimalna aktivnost β-fruktofuranozidaze od 26,69 U/mL postignuta je šaržnim uzgojem nakon 22,5 h. Sirovi enzim β-fruktofuranozidaza, dobiven ultrafiltracijom i frakcioniranjem s (NH4)2SO4, pročišćen je 7 puta, što je potvrđeno usporedbom specifične aktiv...

  9. Exotic and indigenous viruses infect wild populations and captive collections of temperate terrestrial orchids (Diuris species) in Australia.

    Science.gov (United States)

    Wylie, Stephen J; Li, Hua; Dixon, Kingsley W; Richards, Helen; Jones, Michael G K

    2013-01-01

    Four species of Diuris temperate terrestrial orchids from wild and captive populations were tested for the presence of polyadenylated RNA viruses. The genomes of three exotic viruses were determined: two potyviruses, Bean yellow mosaic virus and Ornithogalum mosaic virus, and the polerovirus Turnip yellows virus. The genomes of five indigenous viruses were detected, including four novel species. They were the potyvirus Blue squill virus A, another potyvirus, two proposed capilloviruses, and a partitivirus. Partitivirus infection is of interest as this group of viruses is also associated with endophytic fungi (mycorrhizae) that are necessary for the germination, growth, development of many terrestrial orchids. Sequence divergence data indicate post-European, pre-European, and endemic origins for these viruses via inoculum from introduced and native plants. The implications of the findings of this study for orchid conservation, and particularly reintroduction programs where viruses may be spread inadvertently to wild populations from infected propagation sources, are discussed.

  10. Effect of Arthrobacter agilis UMCV2 on germination and growth of Pinus devoniana Lindley

    Directory of Open Access Journals (Sweden)

    Wilber Montejo-Mayo

    2016-03-01

    Full Text Available Soil microorganisms are essential for growth, emergence and development in all plants. In our study we decided to evaluate the effect that A. agilis UMCV2 rhizobacteria had on germination and growth of plants of economic-forest interest as P. devoniana to an age of 65 days. Our results show that the UMCV2 bacteria promoted growth of P. devoniana at this early stage of development, further highlighting that despite the short time of interaction between these two, the bacterium was able to increase the rate of germination, increase the size of shoot and generate a proliferation of lateral roots. The data shows a huge potential for using inoculum both in the greenhouse and in open ground and generate a growth promoting species of interest in both agricultural and forest, thereby reducing production periods depending on the crop.

  11. Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

    Directory of Open Access Journals (Sweden)

    Léger Patrick

    2010-11-01

    Full Text Available Abstract Background The Fagaceae family comprises about 1,000 woody species worldwide. About half belong to the Quercus family. These oaks are often a source of raw material for biomass wood and fiber. Pedunculate and sessile oaks, are among the most important deciduous forest tree species in Europe. Despite their ecological and economical importance, very few genomic resources have yet been generated for these species. Here, we describe the development of an EST catalogue that will support ecosystem genomics studies, where geneticists, ecophysiologists, molecular biologists and ecologists join their efforts for understanding, monitoring and predicting functional genetic diversity. Results We generated 145,827 sequence reads from 20 cDNA libraries using the Sanger method. Unexploitable chromatograms and quality checking lead us to eliminate 19,941 sequences. Finally a total of 125,925 ESTs were retained from 111,361 cDNA clones. Pyrosequencing was also conducted for 14 libraries, generating 1,948,579 reads, from which 370,566 sequences (19.0% were eliminated, resulting in 1,578,192 sequences. Following clustering and assembly using TGICL pipeline, 1,704,117 EST sequences collapsed into 69,154 tentative contigs and 153,517 singletons, providing 222,671 non-redundant sequences (including alternative transcripts. We also assembled the sequences using MIRA and PartiGene software and compared the three unigene sets. Gene ontology annotation was then assigned to 29,303 unigene elements. Blast search against the SWISS-PROT database revealed putative homologs for 32,810 (14.7% unigene elements, but more extensive search with Pfam, Refseq_protein, Refseq_RNA and eight gene indices revealed homology for 67.4% of them. The EST catalogue was examined for putative homologs of candidate genes involved in bud phenology, cuticle formation, phenylpropanoids biosynthesis and cell wall formation. Our results suggest a good coverage of genes involved in these

  12. Purification and characterization of a novel marine Arthrobacter oxydans KQ11 dextranase.

    Science.gov (United States)

    Wang, Delong; Lu, Mingsheng; Wang, Shujun; Jiao, Yuliang; Li, Weijuan; Zhu, Qiang; Liu, Zhaopu

    2014-06-15

    Dextranases can hydrolyze dextran deposits and have been used in the sugar industry. Microbial strains which produce dextranases for industrial use are chiefly molds, which present safety issues, and dextranase production from them is impractically long. Thus, marine bacteria to produce dextranases may overcome these problems. Crude dextranase was purified by a combination of ammonium sulfate fractionation and ion-exchange chromatography, and then the enzyme was characterized. The enzyme was 66.2 kDa with an optimal temperature of 50°C and a pH of 7. The enzyme had greater than 60% activity at 60°C for 1h. Moreover, 10mM Co(2+) enhanced dextranase activity (196%), whereas Ni(2+) and Fe(3+) negatively affected activity. 0.02% xylitol and 1% alcohol enhanced activity (132.25% and 110.37%, respectively) whereas 0.05% SDS inhibited activity (14.07%). The thickness of S. mutans and mixed-species oral biofilm decreased from 54,340 nm to 36,670 nm and from 64,260 nm to 43,320 nm, respectively. PMID:24721052

  13. Characterization of an exo-inulinase from Arthrobacter: a novel NaCl-tolerant exo-inulinase with high molecular mass.

    Science.gov (United States)

    Shen, Jidong; Zhang, Rui; Li, Junjun; Tang, Xianghua; Li, Ruixian; Wang, Min; Huang, Zunxi; Zhou, Junpei

    2015-01-01

    A glycoside hydrolase family 32 exo-inulinase gene was cloned from Arthrobacter sp. HJ7 isolated from saline soil located in Heijing town. The gene encodes an 892-residue polypeptide with a calculated mass of 95.1 kDa and a high total frequency of amino acid residues G, A, and V (30.0%). Escherichia coli BL21 (DE3) cells were used as hosts to express the exo-inulinase gene. The recombinant exo-inulinase (rInuAHJ7) showed an apparently maximal activity at pH 5.0-5.5 and 40-45°C. The addition of 1.0 and 10.0 mM Zn(2+) and Pb(2+) had little or no effect on the enzyme activity. rInuAHJ7 exhibited good salt tolerance, retaining more than 98% inulinase activity at a concentration of 3.0%-20.0% (w/v) NaCl. Fructose was the main product of inulin, levan, and Jerusalem artichoke tubers hydrolyzed by the enzyme. The present study is the first to report the identification and characterization of an Arthrobacter sp exo-inulinase showing a high molecular mass of 95.1 kDa and NaCl tolerance. These results suggest that the exo-inulinase might be an alternative material for potential applications in processing seafood and other foods with high saline contents, such as marine algae, pickles, and sauces. PMID:25695343

  14. Key enzymes enabling the growth of Arthrobacter sp. strain JBH1 with nitroglycerin as the sole source of carbon and nitrogen.

    Science.gov (United States)

    Husserl, Johana; Hughes, Joseph B; Spain, Jim C

    2012-05-01

    Flavoprotein reductases that catalyze the transformation of nitroglycerin (NG) to dinitro- or mononitroglycerols enable bacteria containing such enzymes to use NG as the nitrogen source. The inability to use the resulting mononitroglycerols limits most strains to incomplete denitration of NG. Recently, Arthrobacter strain JBH1 was isolated for the ability to grow on NG as the sole source of carbon and nitrogen, but the enzymes and mechanisms involved were not established. Here, the enzymes that enable the Arthrobacter strain to incorporate NG into a productive pathway were identified. Enzyme assays indicated that the transformation of nitroglycerin to mononitroglycerol is NADPH dependent and that the subsequent transformation of mononitroglycerol is ATP dependent. Cloning and heterologous expression revealed that a flavoprotein catalyzes selective denitration of NG to 1-mononitroglycerol (1-MNG) and that 1-MNG is transformed to 1-nitro-3-phosphoglycerol by a glycerol kinase homolog. Phosphorylation of the nitroester intermediate enables the subsequent denitration of 1-MNG in a productive pathway that supports the growth of the isolate and mineralization of NG.

  15. Identification of a recombinant inulin fructotransferase (difructose dianhydride III forming) from Arthrobacter sp. 161MFSha2.1 with high specific activity and remarkable thermostability.

    Science.gov (United States)

    Wang, Xiao; Yu, Shuhuai; Zhang, Tao; Jiang, Bo; Mu, Wanmeng

    2015-04-01

    Difructose dianhydride III (DFA III) is a functional carbohydrate produced from inulin by inulin fructotransferase (IFTase, EC 4.2.2.18). In this work, an IFTase gene from Arthrobacter sp. 161MFSha2.1 was cloned and expressed in Escherachia coli. The recombinant enzyme was purified by metal affinity chromatography. It showed significant inulin hydrolysis activity, and the produced main product from inulin was determined as DFA III by nuclear magnetic resonance analysis. The molecular mass of the purified protein was calculated to be 43 and 125 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and gel filtration, respectively, suggesting the native enzyme might be a homotrimer. The recombinant enzyme showed maximal activity as 2391 units/mg at pH 6.5 and 55 °C. It displayed the highest thermostability among previously reported IFTases (DFA III forming) and was stable up to 80 °C for 4 h of incubation. The smallest substrate was determined as nystose. The conversion ratio of inulin to DFA III reached 81% when 100 g/L inulin was catalyzed by 80 nM recombinant enzyme for 20 min at pH 6.5 and 55 °C. All of these data indicated that the IFTase (DFA III forming) from Arthrobacter sp. 161MFSha2.1 had great potential for industrial DFA III production.

  16. Evaluation of chromate reductase activity in the cell-free culture filtrate of Arthrobacter sp. SUK 1201 isolated from chromite mine overburden.

    Science.gov (United States)

    Dey, Satarupa; Paul, A K

    2016-08-01

    Arthrobacter sp. SUK 1201, a chromate resistant and reducing bacterium isolated from chromite mine overburden of Sukinda valley, Odisha, India has been evaluated for its hexavalent chromium [Cr(VI)] reduction potential using cell-free culture filtrate as extracellular chromate reductase enzyme. Production of the enzyme was enhanced in presence of Cr(VI) and its reducing efficiency was increased with increasing concentration of Cr(VI). The Michaelis-Menten constant (Km) and the maximum specific velocity (Vmax) of the extracellular Cr(VI) reductase were calculated to be 54.03 μM Cr(VI) and 5.803 U mg(-1) of protein respectively showing high affinity towards Cr(VI). The reducing activity of the enzyme was maximum at pH 6.5-7.5 and at a temperature of 35 °C and was dependent on NADH. The enzyme was tolerant to different metals such as Mn(II), Mg(II) and Fe(III) and was able to reduce Cr(VI) present in chromite mine seepage. These findings suggest that the extracellular chromate reductase of Arthrobacter sp. SUK 1201 has a great promise for use in Cr(VI) detoxification under different environmental conditions, particularly in the mining waste water treatment systems. PMID:27176938

  17. Altered transcription levels of endocrine associated genes in two fisheries species collected from the Great Barrier Reef catchment and lagoon.

    Science.gov (United States)

    Kroon, Frederieke J; Hook, Sharon E; Jones, Dean; Metcalfe, Suzanne; Henderson, Brent; Smith, Rachael; Warne, Michael St J; Turner, Ryan D; McKeown, Adam; Westcott, David A

    2015-03-01

    The Great Barrier Reef (GBR) is chronically exposed to agricultural run-off containing pesticides, many of which are known endocrine disrupting chemicals (EDCs). Here, we measure mRNA transcript abundance of two EDC biomarkers in wild populations of barramundi (Lates calcarifer) and coral trout (Plectropomus leopardus and Plectropomus maculatus). Transcription levels of liver vitellogenin (vtg) differed significantly in both species amongst sites with different exposures to agricultural run-off; brain aromatase (cyp19a1b) revealed some differences for barramundi only. Exposure to run-off from sugarcane that contains pesticides is a likely pathway given (i) significant associations between barramundi vtg transcription levels, catchment sugarcane land use, and river pesticide concentrations, and (ii) consistency between patterns of coral trout vtg transcription levels and pesticide distribution in the GBR lagoon. Given the potential consequences of such exposure for reproductive fitness and population dynamics, these results are cause for concern for the sustainability of fisheries resources downstream from agricultural land uses.

  18. PLASMID-ENCODED PHTHALATE CATABOLIC PATHWAY IN ARTHROBACTER KEYSERI 12B: BIOTRANSFORMATIONS OF 2-SUBSTITUTED BENZOATES AND THEIR USE IN CLONING AND CHARACTERIZATION OF PHTHALATE CATABOLISM GENES AND GENE PRODUCTS

    Science.gov (United States)

    Several 2-substituted benzoates (including 2-trifluoromethyl-, 2-chloro-, 2-bromo-, 2-iodo-, 2-nitro-, 2-methoxy-, and 2-acetyl-benzoates) were converted by phthalate-grown Arthrobacter keyseri 12B to the corresponding 2-substituted 3,4-dihydroxybenzoates (protocatechuates)...

  19. Crustacea Isopoda collected during the Oc/S "Almirante Saldanha" cruises in southern South America, II: additions to the species of Serolis (Flabellifera, Serolidae

    Directory of Open Access Journals (Sweden)

    Plínio Soares Moreira

    1977-12-01

    Full Text Available This paper reports on part of the species of Serolis Leach, 1818 (Crustacea, Flabellifera, Serolidae collected from benthic stations performed during cruises of the Brazilian Navy Oc/S "Almirante Saldanha" along southern South America. The species studied are Serolis schythei Lütken, 1858, Serolis polaris Richardson, 1911, Serolis foresti Bastida & Torti, 1970, Serolis uaperta Moreira, 1971, Serolis exigua Nordenstam, 1933 and Serolis elliptica Sheppard, 1933. New localities of occurrence are reported, as well as it is given a com plete synonymy for each species treated, and for Serolis schythei and Serolis exigua also its main distinctive characteristics.O presente trabalho versa sobre as especies de isópodes do gênero Serolis Leach, 1818 (Crustacea, Flabellifera, Serolidae coletadas em estações bênticas realizadas ao largo da América do Sul pelo N/Oc "Almirante Saldanha". São estudadas as espécies S. schythei Lütken, 1858, S. polaris Richardson, 1911, S. foresti Bastida & Torti, 1970, S. uaperta Moreira, 1971, S. exigua Nordenstam, 1933 and S. elliptica Sheppard, 1933. Novas localidades de ocorrência são assinaladas, e para algumas espécies as distribuições geográfica e/ou batimétrica são ampliadas. Completa sinonímia e dada para todas as especies, e para S. schythei e S. exigua suas principais características distintivas.

  20. Assess the prevalence rate of Campylobacter genus and Campylobacter jejuni species in raw milk collected from the Amol City by Multiplex- Polymerase Chain Reaction

    Directory of Open Access Journals (Sweden)

    Ali Dabiri

    2016-03-01

    Full Text Available Background & Objective: Campylobacter can be transmitted through the raw milk. The purpose of this study was to determine the prevalence of Campylobacter genus and Campylobacter jejuni (C. jejuni species in raw milk samples. Materials & Methods: In this study, 72 samples of raw milk were collected of the platforms milk in the Amol city in summer. Phenotypic identification of Campylobacter genus and C. jejuni species using microbiology laboratory methods and molecular identification of this bacterium using Multiplex- Polymerase Chain Reaction (M-PCR were performed. The data was calculated using the SPSS 16.0 software and the Fisher's exact test (p < 0.05. Results: Among the 72 samples, 13.88% of samples were contaminated with C. jejuni and 2.77% were contaminated with Campylobacter genus. The highest prevalence rate for this bacterium was in July (20.83% and the lowest prevalence rate was in September (12.5%. The significant difference between the prevalence of the Campylobacter genus and C. jejuni species in raw milk samples in various months of summer was not observed (p = 0.07. Conclusion: This study showed the raw milk contamination with Campylobacter, and thereby the sanitation in the dairy food production places and the use of fast and accurate method to identify this bacterium is important.

  1. Entomological and ecological aspects of six sylvatic species of triatomines (Hemiptera, Reduviidae from the collection of the National Biodiversity Institute of Costa Rica, Central America

    Directory of Open Access Journals (Sweden)

    Rodrigo Zeledón

    2001-08-01

    Full Text Available A total of 797 specimens of wild adult triatomines, belonging to six species from the entomological collections of the Costa Rican National Biodiversity Institute, was studied from the standpoint of their relative abundance, as reflected by light traps, distribution in the country, seasonal variations and climatic and altitudinal preferences. Triatoma dimidiata was the most abundant species (32.9% of the total specimens, with a very extensive distribution in different ecological zones, being more common between 100 to 400 m above sea level mainly at the end of the dry season. T. dispar was the third in frequency (21.5%, with narrower distribution, more abundant between 600 to 800 m and scarce during the dry season. Panstrongylus geniculatus and P. rufotuberculatus, second and fourth in frequency (22.1% and 15.1%, respectively, were widely distributed on both the Pacific and Caribbean basins, the former being more common between 80 to 270 m all year round and the latter below 800 m mainly during the first semester. Eratyrus cuspidatus which represented only 4.9% of the insects, was also present on both basins mainly below 200 m with a tendency to be scarce during certain months of the year, and was found in all types of ecological zones. Finally, Rhodnius pallescens, the least abundant species (3.6% was restricted to very humid areas below 20 m, on the north side and Caribbean basin. With the exception of R. pallescens, males were more commonly found than females. Some epidemiological implications related to the six species are discussed.

  2. Species identification and other data collected from visual observation and other data from AIRCRAFT in the North Pacific Ocean and Puget Sound from 30 November 1977 to 04 October 1978 (NODC Accession 7800394)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Species identification and other data were collected using visual observation and other instruments from AIRCRAFT in the Puget Sound and North Pacific Ocean. Data...

  3. Production of β -cyclodextrin from pH and thermo stable Cyclodextrin Glycosyl Transferase, obtained from Arthrobacter mysorens and its evaluation as a drug carrier for Irbesartan.

    Science.gov (United States)

    Rajesh, Y; Narayanan, K; Reddy, M Sreenivasa; Bhaskar, Vijaya K; Shenoy, G Gautham; Subrahmanyam, V M; Rao, J Venkata

    2015-01-01

    Cyclodextrins (CDs) are carrier molecules produced by cyclization of α-1,4-glucans by Cyclodextrin Glycosyl Transferase (CGTase). These torus shaped molecules have hydrophobic cavity and hydrophilic shell making them useful in pharmaceutical, food, textile, pesticide and cosmetic industries. In this study, culture conditions for the production of CGTase by organism belonging to Arthrobacter genus obtained from a paddy field soil were optimized by single parameter mode. Soluble starch, yeast extract and magnesium sulphate played an important role in CGTase production. Percentage increase in CGTase yield under optimized conditions was 396.77%. The enzyme precipitated by 60% ammonium sulphate was purified using DEAE-sepharose. The molecular weight of the purified protein as determined by SDS-PAGE was 75 kDa. Purified CGTase was thermostable and stable over a wide pH range. Dissolution studies on β -cyclodextrin-Irbesartan complex revealed that β -CDs formed were useful in preparing immediate release oral dosage forms. PMID:25901452

  4. A new cold-adapted β-D-galactosidase from the Antarctic Arthrobacter sp. 32c – gene cloning, overexpression, purification and properties

    Directory of Open Access Journals (Sweden)

    Kur Józef

    2009-07-01

    Full Text Available Abstract Background The development of a new cold-active β-D-galactosidases and microorganisms that efficiently ferment lactose is of high biotechnological interest, particularly for lactose removal in milk and dairy products at low temperatures and for cheese whey bioremediation processes with simultaneous bio-ethanol production. Results In this article, we present a new β-D-galactosidase as a candidate to be applied in the above mentioned biotechnological processes. The gene encoding this β-D-galactosidase has been isolated from the genomic DNA library of Antarctic bacterium Arthrobacter sp. 32c, sequenced, cloned, expressed in Escherichia coli and Pichia pastoris, purified and characterized. 27 mg of β-D-galactosidase was purified from 1 L of culture with the use of an intracellular E. coli expression system. The protein was also produced extracellularly by P. pastoris in high amounts giving approximately 137 mg and 97 mg of purified enzyme from 1 L of P. pastoris culture for the AOX1 and a constitutive system, respectively. The enzyme was purified to electrophoretic homogeneity by using either one step- or a fast two step- procedure including protein precipitation and affinity chromatography. The enzyme was found to be active as a homotrimeric protein consisting of 695 amino acid residues in each monomer. Although, the maximum activity of the enzyme was determined at pH 6.5 and 50°C, 60% of the maximum activity of the enzyme was determined at 25°C and 15% of the maximum activity was detected at 0°C. Conclusion The properties of Arthrobacter sp. 32cβ-D-galactosidase suggest that this enzyme could be useful for low-cost, industrial conversion of lactose into galactose and glucose in milk products and could be an interesting alternative for the production of ethanol from lactose-based feedstock.

  5. Effects of Cd (Ⅱ) on the physico-biochemical behaviors of Arthrobacter sp.and Bacillus sp.%镉胁迫对节杆菌(Arthrobacter sp.)和芽孢杆菌(Bacillus sp.)生理生化特性的影响

    Institute of Scientific and Technical Information of China (English)

    杜瑞英

    2012-01-01

    将节杆菌和芽孢杆菌分别暴露于不同质量比的镉溶液中,进行不同暴露时间的急性毒性试验.结果表明,20 mg/kg的Cd(Ⅱ)处理会使节杆菌中还原型谷胱甘肽(GSH)质量浓度显著降低,细胞膜脂质过氧化产物——硫代巴比妥酸活性物质(TBARS)浓度显著升高;0.2mg/kg的Cd(Ⅱ)处理会使芽孢杆菌中GSH质量浓度、过氧化氢酶(CAT)活性显著降低.节杆菌的可溶性蛋白、可溶性糖质量浓度随暴露时间延长而减少,GSH质量浓度、CAT和超氧化物歧化酶(SOD)活性随暴露时间延长而增加,TBARS浓度呈先减后增的变化趋势;芽孢杆菌的可溶性蛋白质量浓度、CAT活性和TBARS浓度呈先增后减的变化趋势,可溶性糖、GSH质量浓度和SOD活性呈先减后增的变化趋势.镉处理对节杆菌和芽孢杆菌具有一定的胁迫作用,两种菌通过启动不同的抗性系统来抵抗外界胁迫.%This paper is engaged in the study of the effects of Cd(II) on the physico-biochemical behaviors of Arthrobacter sp. through tox-icity testing. The toxicity test has been arranged by putting the an-tioxidant system of Arthrobacter sp. and Bacillus sp. under the exposure to different concentrations of Cd(II) for different lengths of testing time. The results of our testing show that Cd(II) has a strong impact on the antioxidant system of Arthrobacter sp. and Bacillus sp. . However, it is possible to reduce GSH content and increase TBARS content of Arthrobacter sp. significantly by letting Cd(II) treated with 20 mg/kg. Our testing proves that it is possible to reduce the GSH content and CAT activity of Bacillus sp. significantly by treating Cd(II) with 0.2 mg/kg, for the Arthrobacter sp. , the soluble protein and soluble sugar content can be reduced through prolonging the time of exposure. On the contrary, it is also possible to increase the GSH content and the CAT & SOD activity by means of prolonging the exposure, with the TBARS content

  6. Collecting biodiversity

    OpenAIRE

    Haripersaud, P.P.

    2009-01-01

    Collecting biodiversity There are major concerns about the use of primary species occurrence data that are rapidly becoming available on the internet for ecological studies. To this end, this research assessed the extent of biases associated with a herbarium dataset based is based on specimens collected in Guyana, Suriname and French Guiana. After getting an understanding of the biases, the database was used to: (a) develop a model to simulate relative abundance distributions in the herbarium...

  7. Spatial distribution and temporal trends of soft-bottom marine benthic alien species collected during the period 1989-2008 in the Nervión estuary (southeastern Bay of Biscay)

    Science.gov (United States)

    Zorita, Izaskun; Solaun, Oihana; Borja, Angel; Franco, Javier; Muxika, Iñigo; Pascual, Marta

    2013-10-01

    As the introduction of alien species represents one of the most important causes of biodiversity loss, it is crucial to study the distribution of alien species in order to control or eradicate their introduction and spread. Thus, the present study aimed to analyse the spatial distribution and temporal trends of soft-bottom marine benthic alien species collected during 20 years in the Nervión estuary, southeastern Bay of Biscay. Results indicated that, from a total of 6688 species records, 117 corresponded to alien species. Likewise, from a total of 742 different species identified, 23 species were classified as alien species. The two most frequently recorded alien species, Pseudopolydora paucibranchiata and Monocorophium acherusicum, appeared mainly at the intermediate part of the estuary that suffered historically an intense pollution. The presence and abundance of soft-bottom alien species became more evident since the mid-nineties, when the widening of the Bilbao Harbour occurred, together with a water quality improvement and the industry decline. Finally, although the identified alien species are considered as not invasive, the spread of alien species in the estuary might be considered as a threat.

  8. Biogeochemical plant–soil interaction: Variable element composition in leaves of four plant species collected along a south–north transect at the southern tip of Norway

    Energy Technology Data Exchange (ETDEWEB)

    Reimann, C., E-mail: clemens.reimann@ngu.no [Geological Survey of Norway (NGU), PO Box 6315 Sluppen, N-7491 Trondheim (Norway); Englmaier, P. [Department of Freshwater Ecology, Faculty of Life Science, University of Vienna, Althanstr. 14, A-1090 Vienna (Austria); Fabian, K. [Geological Survey of Norway (NGU), PO Box 6315 Sluppen, N-7491 Trondheim (Norway); Gough, L. [US Geological Survey National Centre, MS 954, Reston, VA 20192 (United States); Lamothe, P. [US Geological Survey, Denver Federal Centre, Box 25046, MS-964, Denver, CO 80225 (United States); Smith, D. [US Geological Survey, Denver Federal Centre, Box 25046, MS-973, Denver, CO 80225 (United States)

    2015-02-15

    Leaves from four different plant species (birch, willow, juniper, and heather) together with samples of the soil O and C horizons were collected at 44–46 sites along a south-to-north transect extending inland for 200 km from the southern tip of Norway. The transect covers one of the steepest vegetation gradients on Earth, crossing six vegetation zones. Juniper and heather are evergreen, and preferably exclude potentially toxic elements to avoid their accumulation in assimilating tissues, birch and willow shed their leaves in autumn together with the load of potentially toxic elements, and thus can tolerate the uptake of such elements. The plant leaves show the highest concentrations for B, Ca, K, Mg, Mn, P, Rb and S. In the soil O-horizon Ag, Au, As, Bi, Cu, Ge, Hg, In, Pb, Sb, Se, Sn, Te and W are enriched with respect to the C-horizon, whilst Mn and Rb are depleted. Cadmium, Sr and Zn are enriched in willow and Cs, Na and Tl in heather. In terms of concentration gradients from the coast inland, two different patterns are detected: 1) short range with an almost exponential decrease of concentrations from the coast, which appears to be typical for seaspray-related element input, and 2) long range with an almost linear decrease of concentrations with distance from the coast. These patterns differ among the four species, even for one and the same element. Inter-element correlation is different from material to material. Along the transect each of the different plants at the same site individually adapts to the available element combination. High linear correlations in the plants occur between the lanthanides (La, Ce, Y), and interestingly, between P and Ti. The plant/soil system appears highly non-linear and self-regulated. - Highlights: • Plant–soil element uptake and interactions were studied along a 200 km transect. • 53 elements were analysed in leaves of 4 plants and 2 soil horizons. • Element relations within and between the materials revealed

  9. Levan fructotransferase from Arthrobacter oxydans J17-21 catalyzes the formation of the di-D-fructose dianhydride IV from levan.

    Science.gov (United States)

    Jang, Ki-Hyo; Ryu, Eun-Ja; Park, Buem-Seek; Song, Ki-Bang; Kang, Soon Ah; Kim, Chul Ho; Uhm, Tai-Boong; Park, Yong-Il; Rhee, Sang-Ki

    2003-04-23

    A new levan fructotransferase (LFTase) isolated from Arthrobacter oxydans J17-21 was characterized for the production of difructose dianhydride IV (DFA IV). LFTase was purified to apparent homogeneity by Q-Sepharose ion exchange chromatography, Mono-Q HR 5/5 column chromatography, and gel permeation chromatography. The enzyme had an apparent molecular mass of 54000 Da. The optimum pH for the enzyme-catalyzed reaction was pH 6.5, and the optimum temperature was observed at 45 degrees C. The LFTase was activated by the presence of CaCl(2) and EDTA-2Na but inhibited strongly by MnCl(2) and CuSO(4) at 1 mM and completely by FeSO(4) and Ag(2)SO(4) at 1 mM. A bacterial levan from Zymomonas mobilis was incubated with an LFTase; final conversion yield from the levan to DFA IV was 35%. Neither inulin, levanbiose, sucrose, dextran, nor starch was hydrolyzed by LFTase. DFA IV was very stable at acidic pH and high temperature, thus indicating that DFA IV may be suitable for the food industry and related areas. PMID:12696949

  10. Probing the Role of Two Critical Residues in Inulin Fructotransferase (DFA III-Producing) Thermostability from Arthrobacter sp. 161MFSha2.1.

    Science.gov (United States)

    Yu, Shuhuai; Wang, Xiao; Zhang, Tao; Jiang, Bo; Mu, Wanmeng

    2016-08-10

    Inulin fructotransferase (IFTase) is an important enzyme that produces di-d-fructofuranose 1,2':2,3' dianhydride (DAF III), which is beneficial for human health. Present investigations mainly focus on screening and characterizing IFTase, including catalytic efficiency and thermostability, which are two important factors for enzymatic industrial applications. However, few reports aimed to improve these two characteristics based on the structure of IFTase. In this work, a structural model of IFTase (DFA III-producing) from Arthrobacter sp. 161MFSha2.1 was constructed through homology modeling. Analysis of this model reveals that two residues, Ser-309 and Ser-333, may play key roles in the structural stability. Therefore, the functions of the two residues were probed by site-directed mutagenesis combined with the Nano-DSC method and assays for residual activity. In contrast to other mutations, single mutation of serine 309 (or serine 333) to threonine did not decrease the enzymatic stability, whereas double mutation (serine 309 and serine 333 to threonine) can enhance thermostability (by approximately 5 °C). The probable mechanisms for this enhancement were investigated.

  11. Interaction mechanism between Arthrobacter oxydans and BaP-Cd%氧化节杆菌与苯并[a]芘-镉交互作用机理

    Institute of Scientific and Technical Information of China (English)

    邓军; 尹华; 叶锦韶; 彭辉; 秦华明; 龙焰; 何宝燕; 张娜

    2010-01-01

    利用HPLC、FTIR分析技术,研究了氧化节杆菌(Arthrobacter oxydans)对水体中苯并[a]芘(BaP)-镉(Cd)复合污染物交互作用机理.结果表明,BaP、Cd及BaP-Cd复合污染均对菌株的正常生长产生影响,其影响程度为:BaP-Cd>Cd>BaP;使用该菌投加到BaP、Cd浓度均为1 mg·L~(-1)的BaP-Cd复合污染无机盐溶液中,30 ℃、130 r·min~(-1),培养5 d后,体系BaP、Cd的残留量分别为0.39、0.65 mg·L~(-1);添加一定浓度的H_2O_2并保持体系呈偏碱性更适于该复合污染的处理.红外扫描分析显示,在微生物作用下,BaP的结构发生改变,菌株降解BaP和吸附Cd的过程主要与羟基、CC键、酰胺基团和C-H键有关.

  12. Characteristics of an organic solvent-tolerant β-fructofuranosidase from Arthrobacter arilaitensis NJEM01 and efficient synthesis of prebiotic kestose.

    Science.gov (United States)

    Chu, Jianlin; Wu, Xueming; Wu, Bin; Wang, Rui; He, Bingfang

    2014-06-18

    An organic solvent-tolerant β-fructofuranosidase (β-FFase) from Arthrobacter arilaitensis NJEM01 was purified, characterized, cloned, and overexpressed in Escherichia coli. The mature β-FFase contained 495 amino acid residues with an estimated molecular mass of 55 kDa. The purified β-FFase from strain NJEM01 was very stable in the buffer systems (pH 5.0-9.5) and showed high stability below 45 °C. Furthermore, the enzyme exhibited relatively high solvent stability in various aqueous organic mixtures and retained nearly 100% of its initial activity after incubation for 10 days in 20% (v/v) DMSO. In addition, the β-FFase exhibited high transfructosylation activity, synthesized prebiotic products of mainly 6-kestose (up to 476 g/L), and showed fructosyl receptor specificity to C-glucosyl flavone. A relatively high yield of FOS was achieved by the β-FFase from bacterium with a high concentration of sucrose. It made the β-FFase an exploitable biocatalyst for the production of glycosides of natural products and prebiotic kestose. PMID:24854707

  13. Cloning, nucleotide sequence and expression of a new L-N-carbamoylase gene from Arthrobacter aurescens DSM 3747 in E. coli.

    Science.gov (United States)

    Wilms, B; Wiese, A; Syldatk, C; Mattes, R; Altenbuchner, J; Pietzsch, M

    1999-02-19

    An L-N-carbamoyl amino acid amidohydrolase (L-N-carbamoylase) from Arthrobacter aurescens DSM 3747 was cloned in E. coli and the nucleotide sequence was determined. After expression of the gene in E. coli the enzyme was purified to homogeneity and characterized. The enzyme was shown to be strictly L-specific and exhibited the highest activity in the hydrolysis of beta-aryl substituted N alpha-carbamoyl-alanines as e.g. N-carbamoyl-tryptophan. Carbamoyl derivatives of beta-alanine and charged aliphatic amino acids were not accepted as substrates. The N-carbamoylase of A. aurescens DSM 3747 differs from all known enzymes with respect to its substrate specificity although amino acid sequence identity scores of 35-38% to other N-carbamoylases have been detected. The enzyme consists of two subunits of 44,000 Da, and has an isoelectric point of 4.3. The optima of temperature and pH were determined to be 50 degrees C and pH 8.5 respectively. At 37 degrees C the enzyme was completely stable for several days. PMID:10194852

  14. Assessment of phylogenetic relationship of rare plant species collected from Saudi Arabia using internal transcribed spacer sequences of nuclear ribosomal DNA.

    Science.gov (United States)

    Al-Qurainy, F; Khan, S; Nadeem, M; Tarroum, M; Alaklabi, A

    2013-01-01

    The rare and endangered plants of any country are important genetic resources that often require urgent conservation measures. Assessment of phylogenetic relationships and evaluation of genetic diversity is very important prior to implementation of conservation strategies for saving rare and endangered plant species. We used internal transcribed spacer sequences of nuclear ribosomal DNA for the evaluation of sequence identity from the available taxa in the GenBank database by using the Basic Local Alignment Search Tool (BLAST). Two rare plant species viz, Heliotropium strigosum claded with H. pilosum (98% branch support) and Pancratium tortuosum claded with P. tenuifolium (61% branch support) clearly. However, some species, viz Scadoxus multiflorus, Commiphora myrrha and Senecio hadiensis showed close relationships with more than one species. We conclude that nuclear ribosomal internal transcribed spacer sequences are useful markers for phylogenetic study of these rare plant species in Saudi Arabia.

  15. Characterizing the Catalytic Potential of Deinococcus, Arthrobacter and other Robust Bacteria in Contaminated Subsurface Environments of the Hanford Site

    Energy Technology Data Exchange (ETDEWEB)

    Daly, Michael J.

    2007-07-23

    Progress is briefly summarized in these areas: ionizing radiation resistance in bacteria; a hypothesis regarding ionizing radiation resistance emerging for bacterial cells; transcriptome analysis of irradiated D. radiodurans and Shewanella oneidensis; the role of metal reduction in Mn-dependnet Deinococcal species; and engineered Deinococcus strains as models for bioremediation. Key findings are also reported regarding protein oxidation as a possible key to bacterial desiccation resistance, and the whole-genome sequence of the thermophile Deinococcus geothermalis.

  16. Morphological and molecular description of eight new species of Gyrodactylus von Nordmann, 1832 (Platyhelminthes: Monogenea) from poeciliid fishes, collected in their natural distribution range in the Gulf of Mexico slope, Mexico.

    Science.gov (United States)

    García-Vásquez, Adriana; Razo-Mendivil, Ulises; Rubio-Godoy, Miguel

    2015-09-01

    Eight new species of Gyrodactylus are described from Poecilia mexicana, Poeciliopsis gracilis, Pseudoxiphophorus bimaculatus [syn. = Heterandria bimaculata], and Xiphophorus hellerii collected in the Nautla and La Antigua River Basins in Veracruz, and in the Tecolutla River Basin in Puebla, Mexico. Analyzing the morphology of the marginal hooks, Gyrodactylus pseudobullatarudis n. sp. and Gyrodactylus xtachuna n. sp. are both very similar to Gyrodactylus bullatarudis; Gyrodactylus takoke n. sp. resembles Gyrodactylus xalapensis; Gyrodactylus lhkahuili n. sp. is similar to Gyrodactylus jarocho; and both Gyrodactylus microdactylus n. sp. and Gyrodactylus actzu n. sp. are similar to Gyrodactylus poeciliae in that all three species possess extremely short shaft points. A hypothesis of the systematic relationships of the eight new Gyrodactylus species and some of the known gyrodactylids infecting poeciliids was constructed with sequences of the Internal Transcribed Spacers (ITS1 and ITS2) and the 5.8S ribosomal gene of the rRNA. Phylogenetic trees showed that the new and previously described species of Gyrodactylus infecting poeciliid fishes do not form a monophyletic assemblage. Trees also showed that the eight new species described morphologically correspond to well-supported monophyletic groups; and that morphologically similar species are also phylogenetically close. Additionally, we correct previous erroneous records of the presence of Gyrodactylus bullatarudis on wild Poecilia mexicana and Xiphophorus hellerii collected in Mexico, as re-examination of the original specimens indicated that these corresponded to Gyrodactylus pseudobullatarudis n. sp. (infecting Poecilia mexicana and Xiphophorus hellerii) and to Gyrodactylus xtachuna n. sp. (on Xiphophorus hellerii). Finally, given the widespread anthropogenic translocation of poeciliid fishes for the aquarium trade and mosquito control programs, as well as the existence of invasive, feral poeciliid populations

  17. In Silico Approach to Support that p-Nitrophenol Monooxygenase from Arthrobacter sp. Strain JS443 Catalyzes the Initial Two Sequential Monooxygenations.

    Science.gov (United States)

    Kallubai, Monika; Amineni, Umamaheswari; Mallavarapu, Megharaj; Kadiyala, Venkateswarlu

    2015-06-01

    p-Nitrophenol (PNP), used primarily for manufacturing pesticides and dyes, has been recognized as a priority environmental pollutant. It is therefore important to reduce the input of this toxicant into the environment and to establish approaches for its removal from the contaminated sites. PNP monooxygenase, a novel enzyme from Gram-positive bacteria like Arthrobacter sp. and Bacillus sp., that comprises two components, a flavoprotein reductase and an oxygenase, catalyzes the initial two sequential monooxygenations to convert PNP to trihydroxybenzene. Accurate and reliable prediction of this enzyme-substrate interactions and binding affinity are of vital importance in understanding these catalytic mechanisms of the two sequential reactions. As crystal structure of the enzyme has not yet been published, we built a homology model for PNP monooxygenase using crystallized chlorophenol 4-monooxygenase from Burkholderia cepacia AC1100 (3HWC) as the template. The model was assessed for its reliability using PROCHECK, ERRAT and ProSA. Molecular docking of the physiological substrates, PNP and 4-nitrocatechol (4-NC), was carried out using Glide v5.7 implemented in Maestro v9.2, and the binding energies were calculated to substantiate the prediction. Docking complexes formed by molecular level interactions of PNP monooxygenase-PNP/4-NC without or with the cofactors, FAD and NADH, showed good correlation with the established experimental evidence that the two-component PNP monooxygenase catalyzes both the hydroxylation of PNP and the oxidative release of nitrite from 4-NC in B. sphaericus JS905. Furthermore, molecular dynamics simulations performed for docking complexes using Desmond v3.0 showed stable nature of the interactions as well.

  18. Identification of a Novel Di-D-Fructofuranose 1,2’:2,3’ Dianhydride (DFA III) Hydrolysis Enzyme from Arthrobacter aurescens SK8.001

    Science.gov (United States)

    Yu, Shuhuai; Wang, Xiao; Zhang, Tao; Stressler, Timo; Fischer, Lutz; Jiang, Bo; Mu, Wanmeng

    2015-01-01

    Previously, a di-D-fructofuranose 1,2’:2,3’ dianhydride (DFA III)-producing strain, Arthrobacter aurescens SK8.001, was isolated from soil, and the gene cloning and characterization of the DFA III-forming enzyme was studied. In this study, a DFA III hydrolysis enzyme (DFA IIIase)-encoding gene was obtained from the same strain, and the DFA IIIase gene was cloned and expressed in Escherichia coli. The SDS-PAGE and gel filtration results indicated that the purified enzyme was a homotrimer holoenzyme of 145 kDa composed of subunits of 49 kDa. The enzyme displayed the highest catalytic activity for DFA III at pH 5.5 and 55°C, with specific activity of 232 U mg-1. Km and Vmax for DFA III were 30.7 ± 4.3 mM and 1.2 ± 0.1 mM min-1, respectively. Interestingly, DFA III-forming enzymes and DFA IIIases are highly homologous in amino acid sequence. The molecular modeling and docking of DFA IIIase were first studied, using DFA III-forming enzyme from Bacillus sp. snu-7 as a template. It was suggested that A. aurescens DFA IIIase shared a similar three-dimensional structure with the reported DFA III-forming enzyme from Bacillus sp. snu-7. Furthermore, their catalytic sites may occupy the same position on the proteins. Based on molecular docking analysis and site-directed mutagenesis, it was shown that D207 and E218 were two potential critical residues for the catalysis of A. aurescens DFA IIIase. PMID:26555784

  19. Arthrobacter aurescens TC1 Atrazine Catabolism Genes trzN, atzB, and atzC Are Linked on a 160-Kilobase Region and Are Functional in Escherichia coli

    OpenAIRE

    Sajjaphan, Kannika; Shapir, Nir; Wackett, Lawrence P; Palmer, Michael; Blackmon, Barbara; Tomkins, Jeff; Sadowsky, Michael J.

    2004-01-01

    Arthrobacter aurescens strain TC1 metabolizes atrazine to cyanuric acid via TrzN, AtzB, and AtzC. The complete sequence of a 160-kb bacterial artificial chromosome clone indicated that trzN, atzB, and atzC are linked on the A. aurescens genome. TrzN, AtzB, and AtzC were shown to be functional in Escherichia coli. Hybridization studies localized trzN, atzB, and atzC to a 380-kb plasmid in A. aurescens strain TC1.

  20. The types of Palaearctic species of the families Apionidae, Rhynchitidae, Attelabidae and Curculionidae in the collection of Étienne Louis Geoffroy (Coleoptera, Curculionoidea

    Directory of Open Access Journals (Sweden)

    Alonso-Zarazaga, M. A.

    2008-06-01

    Full Text Available The study of 131 more or less complete Curculionoid specimens of the collection Étienne Louis Geoffroy, conserved in the Muséum d’Histoire Naturelle de Paris (Entomologie has permitted the identification of several nominal species that were nomina dubia and the establishment of several new synonymies and combinations, and, in some cases, the reversion of precedence following Art. 23.9 of the Code, declaring nomina protecta and nomina oblita. New synonymies are (the first term is the valid name: Lixus filiformis (Fabricius, 1781 = Curculio longus Gmelin, 1790; Lasiorhynchites cavifrons (Gyllenhal, 1833 nom. protectum = Rhinomacer viridis Geoffroy, 1785, nom. oblitum; Byctiscus betulae (Linnaeus, 1758 = Rhinomacer auratus Geoffroy, 1785; Neocoenorrhinus pauxillus (Germar, 1824 nom. protectum = Rhinomacer caeruleus Geoffroy, 1785, nom. oblitum; Deporaus betulae (Linnaeus, 1758 = Curculio nigrostriatus Goeze, 1777 = Rhinomacer niger Geoffroy, 1785 = Curculio fuliginosus Gmelin, 1790; Coniocleonus hollbergii (F√•hraeus, 1842 = Curculio sulcatus Goeze, 1777 = Curculio sulcatus Geoffroy, 1785 = Curculio sulcatus Gmelin, 1790; Larinus iaceae (Fabricius, 1775 = Curculio carduelis Goeze, 1777; Hypera postica (Gyllenhal, 1813, nom. protectum = Curculio fasciolatus Geoffroy, 1785, nom. oblitum; Charagmus griseus (Fabricius, 1775 = Curculio cupreosquamosus Goeze, 1777 = Curculio intersectus Geoffroy, 1785 = Curculio squamosus Gmelin, 1790; Sitona hispidulus (Fabricius, 1777 = Curculio griseus Goeze, 1777 = Curculio modestus Geoffroy, 1785 = Curculio geoffroaei Gmelin, 1790; Aulacobaris cuprirostris (Fabricius, 1787 = Curculio viridisericeus Goeze, 1777; Cleopomiarus plantarum (Germar, 1824, nom. protectum =

  1. Using LC and Hierarchical Cluster Analysis as Tools to Distinguish Timbó Collections into Two Deguelia Species: A Contribution to Chemotaxonomy

    Directory of Open Access Journals (Sweden)

    Danielle da Costa

    2016-04-01

    Full Text Available The species Deguelia utilis and Deguelia rufescens var. urucu, popularly known as “timbó,” have been used for many years as rotenone sources in insecticide formulations. In this work, a method was developed and validated using a high-performance liquid chromatography-photodiode array (HPLC-PDA system, and results were analyzed using hierarchical cluster analysis (HCA. By quantifying the major rotenoids of these species, it was possible to establish a linear relation between them. The ratio between the concentrations of rotenone and deguelin for D. utilis is approximately 1:0.8, respectively, while for D. rufescens var. urucu it is 2:1. These results may help to distinguish these species contributing to their taxonomic identification.

  2. Sibling species of the Anopheles funestus group, and their infection with malaria and lymphatic filarial parasites, in archived and newly collected specimens from northeastern Tanzania

    DEFF Research Database (Denmark)

    Derua, Yahya A; Alifrangis, Michael; Magesa, Stephen M;

    2015-01-01

    , and Anopheles leesoni, with the first being by far the most common (overall 94.4%). When comparing archived specimens from 2005-2007 to those from 2008-2012, a small but statistically significant decrease in proportion of An. funestus s.s. was noted, but otherwise observed temporal changes in sibling species......BACKGROUND: Studies on the East African coast have shown a recent dramatic decline in malaria vector density and change in composition of sibling species of the Anopheles gambiae complex, paralleled by a major decline in malaria incidence. In order to better understand the ongoing changes in vector......-parasite dynamics in the area, and to allow for appropriate adjustment of control activities, the present study examined the composition, and malaria and lymphatic filarial infection, of sibling species of the Anopheles funestus group. Similar to the An. gambiae complex, the An. funestus group contains important...

  3. Using LC and Hierarchical Cluster Analysis as Tools to Distinguish Timbó Collections into Two Deguelia Species: A Contribution to Chemotaxonomy.

    Science.gov (United States)

    da Costa, Danielle; E Silva, Consuelo; Pinheiro, Aline; Frommenwiler, Débora; Arruda, Mara; Guilhon, Giselle; Alves, Cláudio; Arruda, Alberto; Da Silva, Milton

    2016-01-01

    The species Deguelia utilis and Deguelia rufescens var. urucu, popularly known as "timbó," have been used for many years as rotenone sources in insecticide formulations. In this work, a method was developed and validated using a high-performance liquid chromatography-photodiode array (HPLC-PDA) system, and results were analyzed using hierarchical cluster analysis (HCA). By quantifying the major rotenoids of these species, it was possible to establish a linear relation between them. The ratio between the concentrations of rotenone and deguelin for D. utilis is approximately 1:0.8, respectively, while for D. rufescens var. urucu it is 2:1. These results may help to distinguish these species contributing to their taxonomic identification. PMID:27144548

  4. Class 1 integrons and tetracycline resistance genes in Alcaligenes, Arthrobacter, and Pseudomonas spp. isolated from pigsties and manured soil

    DEFF Research Database (Denmark)

    Agersø, Yvonne; Sandvang, Dorthe

    2005-01-01

    The presence of tetracycline resistance (Tc-r) genes and class I integrons (in-1), and their ability to cotransfer were investigated in Tc-r gram-negative (185 strains) and gram-positive (72 strains) bacteria from Danish farmland and pigsties. The isolates belonged to the groups or species...... tet(33). No isolates contained more than one tet gene. The in-l-positive isolates were tested for resistance to selected antimicrobial agents and showed resistance to three to nine drugs. Filter-mating experiments showed cotransfer of Tc-r and class I integrons from soil isolates to Escherichia coli...... and/or Pseudomonas putida. We conclude that soil bacteria in close contact to manure or pigsty environment may thus have an important role in horizontal spread of resistance. Use of tetracyclines in food animal production may increase not only Tc-r but also multidrug resistance (caused by the presence...

  5. WATER DEPTH, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE, species abundance and SPECIES IDENTIFICATION - WET WEIGHT trawl data collected in the North Pacific Ocean on the CHARTER/FISHING BOATS cruises FR0206-01, FR0206-02 and others as part of the NEP project from 2000-05-29 to 2002-08-18 (NODC Accession 0114641)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0114641 includes meteorological, biological and trawl data collected aboard the CHARTER/FISHING BOATS during cruises FR0206-01, FR0206-02, FR0208,...

  6. A report on a small collection of shrimps from the Kenya National Marine Parks at Malindi, with notes on selected species

    NARCIS (Netherlands)

    Bruce, A.J.

    1976-01-01

    The marine caridean fauna of East Africa has been little studied. Prior to World War 1, German authors produced a number of general studies but the emphasis of these papers was on crabs. Most of the carideans are reported from Zanzibar. Hilgendorf (1869) reported two unidentified species of Alpheus

  7. Genome mining of the genetic diversity in the Aspergillus genus - from a collection of more than 30 Aspergillus species

    DEFF Research Database (Denmark)

    Rasmussen, Jane Lind Nybo; Vesth, Tammi Camilla; Theobald, Sebastian;

    , this project uses BLAST on the amino acid level to discover orthologs. With a potential of 300 Aspergillus species each having ~12,000 annotated genes, traditional clustering will demand supercomputing. Instead, our approach reduces the search space by identifying isoenzymes within each genome creating...

  8. Notes on a small collection of Calanoid Copepods from the Northeastern Pacific, including the description of a new species of Undinella (Fam. Tharybidae)

    NARCIS (Netherlands)

    Vaupel-Klein, von J.C.

    1970-01-01

    The present paper deals with a sample of Copepoda collected by the crew of the Canadian weathership "P" in the northeastern Pacific, 50°N 145°W, on 22 September 1959 at 08.55 hours, depth 1200 m to the surface, the sample is labelled "V-3". All Copepoda Calanoida, with the exception of nauplii, have

  9. Note on a Collection of Decapoda Branchyura from the Coasts of Mexico, includung the Description of a new Genus and Species

    NARCIS (Netherlands)

    Buitendijk, A.M.

    1950-01-01

    The material of Brachyura on which this paper is based was collected during some years on the Mexican coasts and I am greatly indebted to Dr. F. Bonet of the Escuela Nacional de Ciencias Biologicas in Mexico, D. F., for the opportunity he offered me to study this interesting material and for his kin

  10. Bioactive compounds and antifungal activity of three different seaweed species Ulva lactuca, Sargassum tenerrimum and Laurencia obtusa collected from Okha coast, Western India

    Directory of Open Access Journals (Sweden)

    Megha Barot

    2016-04-01

    Full Text Available Objective: To evaluate bioactive compounds responsible for antifungal activity from seaweeds of Okha coast, Western India. Methods: Each species were extracted with different solvents with increasing polarity: hexane, ethyl acetate, chloroform and methanol using Soxhlet apparatus. The antifungal activity was determined by agar diffusion plate method by using fluconazole, ketoconazole and amphotericin B as standards. Gas chromatography-mass spectrometer analysis was done for identification of bioactive compounds present in crude extract. Results: The gas chromatography-mass spectrometer analysis of all the extracts revealed the presence of steroids, fatty acids and esters compounds. Among the three species, the maximum crude extract yield (53.46% and the largest inhibition zone (36 mm were recorded in methanol extract of Ulva lactuca, whereas the minimum crude extract yield and inhibition zone were recorded in chloroform extract of the same species as 0.5% and 10 mm, respectively. Methanol and ethyl acetate extract showed the maximum antifungal activity and the major important compounds like steroids, fatty acids and esters were detected with higher amount in all the extracts. Conclusions: The present study revealed that the different seaweed extracts showed moderate to significant antifungal activity against the strains tested as compared with the standard fungicides, and polar solvents methanol and ethyl acetate were comparatively efficient for extraction of different metabolites that are responsible for antifungal activity.

  11. Bioactive compounds and antifungal activity of three different seaweed speciesUlva lactuca,Sargassum tenerrimum andLaurencia obtusa collected from Okha coast, Western India

    Institute of Scientific and Technical Information of China (English)

    Megha Barot; Nirmal Kumar J.I.; Rita N. Kumar

    2016-01-01

    Objective:To evaluate bioactive compounds responsible for antifungal activity from seaweeds of Okha coast, Western India. Methods: Each species were extracted with different solvents with increasing polarity: hexane, ethyl acetate, chloroform and methanol using Soxhlet apparatus. The antifungal activity was determined by agar diffusion plate method by using fluconazole, ketoconazole and amphotericin B as standards. Gas chromatography-mass spectrometer analysis was done for identification of bioactive compounds present in crude extract. Results: The gas chromatography-mass spectrometer analysis of all the extracts revealed the presence of steroids, fatty acids and esters compounds. Among the three species, the maximum crude extract yield (53.46%) and the largest inhibition zone (36 mm) were recorded in methanol extract ofUlva lactuca, whereas the minimum crude extract yield and inhibition zone were recorded in chloroform extract of the same species as 0.5% and 10 mm, respectively. Methanol and ethyl acetate extract showed the maximum antifungal activity and the major important compounds like steroids, fatty acids and esters were detected with higher amount in all the extracts. Conclusions: The present study revealed that the different seaweed extracts showed moderate to significant antifungal activity against the strains tested as compared with the standard fungicides, and polar solvents methanol and ethyl acetate were comparatively efficient for extraction of different metabolites that are responsible for antifungal activity.

  12. Genetic diversity of Trichoderma atroviride strains collected in Poland and identification of loci useful in detection of within-species diversity.

    Science.gov (United States)

    Skoneczny, Dominik; Oskiera, Michał; Szczech, Magdalena; Bartoszewski, Grzegorz

    2015-07-01

    Molecular markers that enable monitoring of fungi in their natural environment or assist in the identification of specific strains would facilitate Trichoderma utilization, particularly as an agricultural biocontrol agent (BCA). In this study, sequence analysis of internal transcribed spacer regions 1 and 2 (ITS1 and ITS2) of the ribosomal RNA (rRNA) gene cluster, a fragment of the translation elongation factor 1-alpha (tef1) gene, and random amplified polymorphic DNA (RAPD) markers were applied to determine the genetic diversity of Trichoderma atroviride strains collected in Poland, and also in order to identify loci and PCR-based molecular markers useful in genetic variation assessment of that fungus. Although tef1 and RAPD analysis showed limited genetic diversity among T. atroviride strains collected in Poland, it was possible to distinguish major groups that clustered most of the analyzed strains. Polymorphic RAPD amplicons were cloned and sequenced, yielding sequences representing 13 T. atroviride loci. Based on these sequences, a set of PCR-based markers specific to T. atroviride was developed and examined. Three cleaved amplified polymorphic sequence (CAPS) markers could assist in distinguishing T. atroviride strains. The genomic regions identified may be useful for further exploration and development of more precise markers suitable for T. atroviride identification and monitoring, especially in environmental samples.

  13. 阿特拉津降解茵FM326(Arthrobacter sp.)的分离筛选、鉴定和生物学特性%Isolation, Screening and Identification of Atrazine-degrading Bacterium FM326(Arthrobacter sp.)

    Institute of Scientific and Technical Information of China (English)

    李明锐; 祖艳群; 陈建军; 湛方栋; 何永美; 李元

    2011-01-01

    采集除草剂阿特拉津污染的土壤,通过直接涂布法和富集驯化培养分离法,分别获得6株和5株能够降解阿特拉津的细菌.通过降解效率和降解动态试验,筛选到1株高效降解阿特拉津的菌株FM326,该菌株能以阿特拉津为唯一的碳源和氮源生长,培养96 h后对1000 mg· L-1阿特拉津降解效率达到97%.通过生理生化鉴定和16S rDNA序列分析,菌株FM326鉴定为节杆菌属(Arthrobacter sp.)细菌.该菌株表现出最适生长温度30~35℃,最适生长pH值5~9,好氧生长的生长特性.%The Iriazine herbicide atrazine(2-chloro-4-ethylamino-6-isopropyl-amino-s-triazine) is one of the most used pesticides. Atrazine is principally used for control of certain annual broadleaf and grass weeds, primarily in com but also in sorghum, sugarcane, and other crops. Although atrazine has relatively low persistency in soil, its remanets have been found in many higher concentrations even years after application due to widespread use. Microbial remediation is an effective and economic method to control the environment that has been polluted by atrazine. From herbicide contaminated soil, 5 atrazine degrading bacterial strains were isolated by enrichment culture, and 6 a- trazine-degrading bacterial strains were isolated by direct coating method. In the 11 strains, FM326 was screened out as the most highly efficient degradation bacteria by degradation test and could use atrazine as the sole carbon and nitrogen sources for growth. The degradation efficiency of strain FM326 was up to 97% within 96 hours while atrazine concentration was 1 000 mg-L"'. Strain FM326 was identified as Arthrobacter sp. According to physiological and biochemical tests and the phylogenic tree established by means of 16S rDNA sequencing. Moreover, strain FM326 was aerobic bacteria, its optimum temperature and pH value for growth was 30-35 t and 5~9, respectively. Strain of highly efficient degrading atrazine was found from soils

  14. Lista das espécies de Culicidae (Diptera depositadas na Coleção de Entomologia Pe. J. S. Moure Species list of the Culicidae (Diptera deposited at the Entomological Collection "Pe. J. S. Moure"

    Directory of Open Access Journals (Sweden)

    Ana Cristina Tissot

    2008-01-01

    Full Text Available A Coleção de Entomologia do Departamento de Zoologia da Universidade Federal do Paraná (DZUP abriga cerca de 5.000.000 de exemplares de insetos. A coleção de Diptera está representada por aproximadamente 2.000.000 de exemplares, sendo Muscidae; Culicidae e Syrphidae as famílias mais representativas. A ordem Diptera possui cerca de 150.000 espécies descritas e a coleção conta com cerca de 103.000 exemplares representantes de 78 famílias. A lista das espécies pertencentes à família Culicidae conta com 9.579 exemplares, distribuídos em 2 subfamílias, 7 tribos, 17 gêneros, 26 subgêneros e 85 espécies. A maioria dos exemplares foi coletado em remanescentes de mata localizados em áreas urbanas e rurais, ambientes silvestres e urbanos de regiões litorâneas ou áreas urbanas pertencentes a diferentes cidades do Estado do Paraná, e algumas espécies incluídas foram capturadas nos Estados de São Paulo, Mato Grosso, Santa Catarina e no Distrito Federal. As informações específicas de cada exemplar, como local de coleta, latitude, longitude, coletor, data de coleta, método de coleta e nome do pesquisador que identificou, e também informações taxonômicas como ordem, tribo, gênero, subgênero e espécie, foram informatizados em um banco de dados.The Entomological Collection of Departamento de Zoologia of Universidade Federal do Paraná (DZUP accommodates about 5,000,000 insect specimens. The collection of Diptera is represented by approximately 2,000,000 specimens, being Muscidae, Culicidae and Syrphidae the most representative families. The Diptera order consists of approximately 150,000 described species and in the Collection about 103,000 specimens within 78 families are registered. The list of species of the family Culicidae presents 9,579 specimens within 2 subfamilies, 7 tribes, 17 genera, 26 subgenera and 85 species. Most specimens were captured in forest remnants in urban and rural areas, wild and urban environments in

  15. Variation in cyanobacterial hepatotoxin (microcystin) content of water samples and two species of fishes collected from a shallow lake in Algeria.

    Science.gov (United States)

    Amrani, Amina; Nasri, Hichem; Azzouz, Amina; Kadi, Yacine; Bouaïcha, Noureddine

    2014-04-01

    Microcystins (MCs) produced from cyanobacteria can accumulate in freshwater fish tissues. In this study, variations in these toxins content were examined monthly in water samples and two species of fish in Lake Oubeira, Algeria, from April 2010 to March 2011. During the study period, MCs were analyzed using protein phosphatase type 2A (PP2A) inhibition assay. In lake water, total (dissolved and intracellular toxins) MC concentrations by PP2A ranged from 0.028 to 13.4 μg equivalent MC-LR/l, with a peak in September 2010. MC-LR was the dominant variant (90 % of the total) in water samples, followed by MC-YR and MC-(H4)YR. The highest MC concentration in the omnivorous common carp (Cyprinus carpio) was found in the order intestine > hepatopancreas > muscle; however, in the carnivorous European eel (Anguilla anguilla) the order was liver > intestine > muscle. Highest MC concentrations in the intestine tissue of the common carp were found between August and November 2010 where high MC concentrations were detected in water samples, whereas high levels of MCs in the liver of the European eel were found later between January and February 2011. During the entire period of study, the World Health Organization (WHO) lifetime limit for tolerable daily intake was exceeded only in common carp muscle. PMID:24445842

  16. Influence of single-walled carbon nanotubes on the growth and phenol biodegradation characteristics of Arthrobacter sp.W1%单壁碳纳米管对Arthrobacter sp.W1生长及苯酚降解功能的影响

    Institute of Scientific and Technical Information of China (English)

    李端行; 王经伟; 沈文丽; 张照婧; 厉舒祯; 李会杰; 刘紫嫣; 马桥; 曲媛媛

    2015-01-01

    单壁碳纳米管(SWCNTs)对大肠杆菌等模式菌株的生长抑制作用明显,为了解SWCNTs对具有环境功能的菌株的作用,以苯酚降解菌Arthrobacter sp.Wl为对象,考察不同浓度SWCNTs下菌株W1的生长曲线和苯酚降解曲线,并通过扫描电镜观察、细胞凋亡检测、DNA泄漏量分析和活性氧产量分析考察作用机制.结果表明,特定浓度范围的SWCNTs (0.5-5.0 mg/L)会加快W1的苯酚降解速率,且1.5-2.0 mg/L SWCNTs不抑制Wl的生长.SWCNTs在溶液中形成团簇并吸附Wl细胞,且对Wl产生以物理穿刺为主的毒性作用,但在特定浓度范围的SWCNTS条件下,SWCNTs-菌株-苯酚体系增加了菌体与苯酚的接触机会,从而对Wl生长和苯酚降解产生明显的促进作用.本研究结果可为进一步揭示SWCNTs的环境微生物效应提供理论依据.

  17. Optimization of Process Parameters of Producing Trehalose Synthase by Arthrobacter nicotinovorus Fermentation%响应面法优化食尼古丁节杆菌发酵产海藻糖合成酶的工艺

    Institute of Scientific and Technical Information of China (English)

    张良; 肖勇生; 包珍; 汤峰; 刘媛洁; 郭德斌

    2012-01-01

    [目的]应用响应面法优化食尼古丁节杆菌发酵产海藻糖合成酶的工艺.[方法]首先以培养温度、初始pH、摇床转速、接种量、发酵时间为因素进行单因素试验,在此基础上,应用 Box-Behnken 中心组合设计,以摇床转速、接种量和发酵时间为因素,以食尼古丁节杆菌发酵产海藻糖合成酶酶活的变化为响应值进行试验,运用SAS统计软件对试验数据进行分析,建立二次响应面回归模型,得出重要因素的最佳水平,从而确定最佳的发酵产酶条件.[结果]经响应面法优化获得食尼古丁节杆菌发酵产海藻糖合成酶的工艺参数为转速172.60 r/min、接种量13.96%、发酵时间55.97 h,在此优化条件下,海藻糖合成酶酶活力达到645.48 U/g.[结论]该研究可为海藻糖的生产提供科学依据.%[Objective] To optimize the process parameters of producing.trehalose synthase by Arthrobacter nicotinovorus fermentation. [ Method] The influence of fermentation temperature, initial pH, rotational speed, inoculation amount and fermentation time on trehalose synthase enzyme activity producing by Arthrobacter nicotinovorus fermentation were studied through single factor experiment, and approximately determined the a-mount of the various factors. Then the rotational speed, the inoculation amount and the fermentation time were selected as three factors, the center combination of Box-Behnken design experiments was used to study the change of trehalose synthase enzyme activity in the fermentation as response value. The experiment dates were analyzed by the SAS statistical software to set up quadratic response surface regression model for obtaining the the optimal level of the important factor, determining the optimum conditions of fermentation. [ Result ] The response surface method results showed that the optimum condition of producing trehalose synthase by Arthrobacter nicotinovorus fermentation was as follow; the rotational speed 172

  18. Neutralization of calcite in mineral aerosols by acidic sullur species collected in China and Japan studied by ca K-edge X-ray absorption near-edge structure.

    Science.gov (United States)

    Takahashi, Yoshio; Miyoshi, Takuro; Higashi, Masayuki; Kamioka, Hikari; Kanai, Yutaka

    2009-09-01

    Calcium species in mineral aerosols collected simultaneously in Aksu (near the Taklimakan Desert), Qingdao (eastern China), and Tsukuba (Japan) during dust and nondust periods were determined using Ca K-edge X-ray absorption near-edge structure (XANES). From the fitting of XANES spectra, it was found that (i) calcite and gypsum were the main Ca species in the aerosol samples, and (ii) the gypsum fraction versus total Ca minerals [Gyp]/[Ca2+]t increased progressively in the order Aksu aerosols for all the samples except for that taken in Aksu during the dust period. The decrease of the [Gyp]/[Ca2+]t ratio with an increase in particle size showed that the neutralization effect proceeds from the particle surface. For the Aksu sample in the dust period, however, (i) the [Gyp]/[Ca2+]t ratios obtained by XANES measured in the fluorescence (FL; regarded as bulk analysis) and CEY modes were similar and (ii) size dependence was not found, showing that neutralization is not important for the sample because of the large supply of mineral aerosol with little neutralization effect in Aksu. It was also found that the pH of the aerosol and the ratio of (NH4)2SO4 to gypsum were positively and negatively correlated with the Ca (or calcite) content, respectively. The speciation of Ca by XANES revealed the neutralization processes of acidic sulfur species by calcite during the long-range transport of mineral aerosols. PMID:19764213

  19. Três espécies novas do gênero Chorisoneura (Blattellidae, Chorisoneuriinae coletadas em ninhos de Sphecidae (Hymenoptera do Estado do Acre, Brasil Three new species of the genus Chorisoneura (Blattellidae, Chorisoneuriinae collected in Sphecidae nests (Hymenoptera from Acre State, Brazil

    Directory of Open Access Journals (Sweden)

    Sonia Maria Lopes

    Full Text Available Three new species of Chorisoneura Brunner, 1865 from Acre State, Brazil collected in nests of Podium Fabricius, 1804 (Hymenoptera, Sphecidae are described. Illustrations of genitalia are presented.

  20. Collection Development.

    Science.gov (United States)

    School Libraries in Canada, 2002

    2002-01-01

    Includes 21 articles that discuss collection development in Canadian school libraries. Topics include digital collections in school library media centers; print and electronic library resources; library collections; collaborative projects; print-disabled students; informing administrators of the importance of collection development; censorship;…

  1. New species of Malaysian ferns

    NARCIS (Netherlands)

    Holttum, R.E.

    1962-01-01

    The present paper includes descriptions of several new species of ferns found among recent collections from various parts of Malaysia; also two new combinations of names of species which are of interest on account of their taxonomic history.

  2. SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE, SPECIES IDENTIFICATION - SEX and species abundance pump cast data collected in the North Atlantic Ocean on the EDWIN LINK, OCEANUS and SEWARD JOHNSON cruises EL9904, EL9905 and others as part of the GB project from 1995-06-10 to 1999-05-28 (NODC Accession 0107116)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0107116 includes pump cast and biological data collected aboard the EDWIN LINK, OCEANUS and SEWARD JOHNSON during cruises EL9904, EL9905, OC303 and...

  3. INDIVIDUAL FISH EXAMINATION - WEIGHT, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE and SPECIES IDENTIFICATION - SEX fish examination data collected in the North Pacific Ocean on the CHARTER/FISHING BOATS cruises FR0206-01, FR0206-02 and others as part of the NEP project from 2000-05-29 to 2002-08-18 (NODC Accession 0114242)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0114242 includes fish examination and biological data collected aboard the CHARTER/FISHING BOATS during cruises FR0206-01, FR0206-02, FR0208, SE0005...

  4. SPECIES IDENTIFICATION - ORGANISM LENGTH, SPECIES IDENTIFICATION, WATER DEPTH, SPECIES IDENTIFICATION - LIFE STAGE and other fish examination data collected in the Gulf of Alaska and North Pacific Ocean on the CHARTER/FISHING BOATS cruises GP0108, GP0207-01 and others as part of the NEP project from 2001-07-18 to 2004-11-08 (NODC Accession 0115200)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115200 includes meteorological, fish examination and biological data collected aboard the CHARTER/FISHING BOATS during cruises GP0108, GP0207-01,...

  5. BIOMASS, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE and species abundance tows data collected in the Gulf of Alaska on the ALPHA HELIX and WECOMA cruises HX201, HX203 and others as part of the NEP project from 1997-10-14 to 2004-10-08 (NODC Accession 0113956)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113956 includes tows and biological data collected aboard the ALPHA HELIX and WECOMA during cruises HX201, HX203, HX205, HX208, HX211, HX215, HX217,...

  6. BIOMASS, SPECIES IDENTIFICATION, TAXONOMIC CODE, SPECIES IDENTIFICATION - LIFE STAGE and species abundance tows data collected in the Gulf of Alaska on the ALPHA HELIX and WECOMA cruises HX201, HX203 and others as part of the NEP project from 1997-10-10 to 2004-10-07 (NODC Accession 0113896)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113896 includes tows and biological data collected aboard the ALPHA HELIX and WECOMA during cruises HX201, HX203, HX205, HX208, HX211, HX215, HX217,...

  7. WATER DEPTH, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE and species abundance tows data collected in the North Pacific Ocean on the ATLANTIS, ELAKHA and other platforms cruises AR9807, AT7-21 and others as part of the NEP project from 1997-11-15 to 2003-10-23 (NODC Accession 0114259)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0114259 includes meteorological, tows and biological data collected aboard the ATLANTIS, ELAKHA, NOAA Ship McARTHUR, NEW HORIZON, UNKNOWN and WECOMA...

  8. ANIMALS - INDIVIDUAL - COUNTS, SPECIES IDENTIFICATION - ORGANISM LENGTH, SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE and species abundance profile and discrete sample data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0104 and LMG0203 as part of the Southern Ocean GLOBEC project from 2001-05-01 to 2002-05-10 (NODC Accession 0112167)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112167 includes profile, discrete sample and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0104 and LMG0203 in the South...

  9. SEA STATE, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE, species abundance and WIND SPEED trawl data collected in the Gulf of Alaska on the PANDALUS cruises PA0101, PA0102 and others as part of the NEP project from 1999-08-27 to 2004-09-17 (NODC Accession 0115221)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115221 includes meteorological, biological, physical and trawl data collected aboard the PANDALUS during cruises PA0101, PA0102, PA0103, PA0104,...

  10. BIOMASS, SPECIES IDENTIFICATION, SPECIES IDENTIFICATION - LIFE STAGE and species abundance tows data collected in the North Pacific Ocean on the CHARTER/FISHING BOATS cruises FR0206-01, FR0206-02 and others as part of the NEP project from 2000-05-29 to 2002-08-17 (NODC Accession 0113950)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113950 includes tows and biological data collected aboard the CHARTER/FISHING BOATS during cruises FR0206-01, FR0206-02, FR0208, SE0005 and SE0007...

  11. Áreas prioritarias para colectar germoplasma de Amaranthus en México con base en la diversidad y riqueza de especies Priority areas to collect Amaranthus germplasm in Mexico based on diversity and species richness

    Directory of Open Access Journals (Sweden)

    Eduardo Espitia Rangel

    Full Text Available Esta investigación tuvo como objetivo utilizar el Sistema de Información Geográfico, para crear mapas de índices de diversidad y riqueza de especies del género Amaranthus en México, para proyectar las mejores áreas de colecta de germoplasma. La máxima riqueza de especies se encontró en el centro occidente del Estado de México incluyendo el Distrito Federal y la costa del Pacífico, entre Jalisco y Colima, así como en Sinaloa. El índice de biodiversidad de Brillouin mostró alta diversidad en la costa del Pacífico, Sinaloa, entre los estados de Jalisco y Colima, además el centro occidente de Nuevo León, la región de la Huasteca del sureste de Tamaulipas y noreste de Veracruz, así como la zona noroeste de la Península de Yucatán. Las áreas prioritarias que se proponen son: la costa central de Sinaloa, sur de la región biogeográfica de Sonora, parte centro occidente del Estado de México incluyendo el Distrito Federal, región biogeográfica del Eje Volcánico Transmexicano y la costa del pacífico centro entre los estados de Jalisco y Colima, finalmente en la región biogeográfica de la costa pacífica mexicana.This investigation had as objective to use the Geographical Information System, to create maps of indexes of diversity and wealth of species of genus Amaranthus in Mexico, to plan the best areas of germplasm collection. The maximum wealth of species was in west center of State of Mexico including Distrito Federal and the Pacific coast, between Jalisco and Colima, as well as in Sinaloa. The Brillouin index of biodiversity showed high diversity in the Pacific coast, Sinaloa, between the states of Jalisco and Colima, also the west center of Nuevo León, the region of Huasteca of southeast of Tamaulipas and northeast of Veracruz, as well as the northwest area of Yucatán Peninsula. The priority areas proposed are: the central coast of Sinaloa, south of biogeographic region of Sonora, west center section of State of Mexico

  12. Collective Enumeration

    Science.gov (United States)

    Bahrami, Bahador; Didino, Daniele; Frith, Chris; Butterworth, Brian; Rees, Geraint

    2013-01-01

    Many joint decisions in everyday life (e.g., Which bar is less crowded?) depend on approximate enumeration, but very little is known about the psychological characteristics of counting together. Here we systematically investigated collective approximate enumeration. Pairs of participants made individual and collective enumeration judgments in a…

  13. Generative collectives

    NARCIS (Netherlands)

    W. van Osch; M. Avital

    2010-01-01

    Analyzing generative group activities against the backdrop of an increasingly connected world, this theory development paper introduces the concept of "generative collectives" as a new framework for classifying internet-based collectives and a novel theoretical lens for explaining why some internet-

  14. Collective Bargaining.

    Science.gov (United States)

    Zirkel, Perry A.

    This chapter discusses litigation touching on collective bargaining issues. The chapter is organized to follow the collective bargaining process, from cases dealing with union organizing to cases involving arbitration. Issues covered also include determination of bargaining units, scope of bargaining, union security, and unfair labor practices in…

  15. Temperature, salinity, and zooplankton species identification, number per sample, and wet weight per sample collected by MOCNESS net tow in the Gulf of Alaska from 13 October 1997 to 13 May 1999 (NODC Accession 0000102)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Temperature profile, zooplantkon, and other data were collected using MOCNESS net tows casts from the ALPHA HELIX in the Gulf of Alaska. Data were collected from 13...

  16. Culture collections.

    Science.gov (United States)

    Smith, David

    2012-01-01

    Culture collections no matter their size, form, or institutional objectives play a role in underpinning microbiology, supplying the resources for study, innovation, and discovery. Their basic roles include providing a mechanism for ex situ conservation of organisms; they are repositories for strains subject to publication, taking in safe, confidential, and patent deposits from researchers. They supply strains for use; therefore, the microorganisms provided must be authentic and preserved well, and any associated information must be valid and sufficient to facilitate the confirmation of their identity and to facilitate their use. The organisms must be collected in compliance with international conventions, international and national legislation and distributed to users indicating clearly the terms and conditions under which they are received and can be used. Collections are harmonizing approaches and characterizing strains to meet user needs. No one single collection can carry out this task alone, and therefore, it is important that output and strategy are coordinated to ensure culture collections deliver the basic resources and services microbiological innovation requires. This chapter describes the types of collection and how they can implement quality management systems and operate to deliver their basic functions. The links to information sources given not only provide support for the practitioners within collections but also provide guidance to users on accessing the huge resource available and how they can help ensure microbiology has the resources and a solid platform for future development.

  17. Preliminary separation and qualitative analysis of carotenoids in Arthrobacter sp.%一株节杆菌发酵产物中类胡萝卜素的分离及组分分析的初探

    Institute of Scientific and Technical Information of China (English)

    翟玉贵; 张伟国; 钱和

    2014-01-01

    [目的]对实验室保存的一株红色球菌进行菌株鉴定,并对色素提取液的组分进行定性分析.[方法]采取形态学观察、16S rDNA序列同源性分析和生理生化分析相结合的方法确定菌株的分类地位.使用乙醇-丙酮混合液提取胞内色素,采用硅胶G薄板层析法对色素提取液进行初步分离纯化,并结合其光谱吸收特性、质谱结果进行定性分析.[结果]实验结果表明此菌株属于节杆菌属(Arthrobacter sp.).薄板层析结果显示该菌株内主要有4种色素组分,且靠近溶剂前沿组分为黄色,其它组分皆为橘红色.吸收光谱特性、质谱结果显示黄色组分可能为β-胡萝卜素,橘红色组分可能为螺菌黄质系类胡萝卜素.[结论]此株节杆菌以较为廉价的糖蜜和玉米浆作为营养物质用于满足自身生长需要,并且积累胞内类胡萝卜素,因此该菌的进一步研究有一定的价值.

  18. Pb2 + Tolerance and Adsorption of Arthrobacter sp. 12-1 Isolated from Lead-zinc Mine Tailing Dam%铅锌矿尾矿坝分离节杆菌12-1对Pb2+的耐受和吸附性能研究

    Institute of Scientific and Technical Information of China (English)

    陈志; 邹情雅; 潘晓鸿; 林璋; 关雄

    2014-01-01

    The extensive exploitation and usage of lead resources have caused serious environmental pollution problems currently. Bioremediation of Pb2 + contaminated water and soil environments using microbes is regarded as a promising technology due to the advantages of its cost-effective, easy operation and environmental-friendly properties. In order to understand Pb2+ biosorption characterization of microbes, an indigenous lead-resistant bacterium-Arthrobacter sp. 12-1(GenBank No. KM362724) was isolated from lead-zinc mine tailing dam, and the process and mechanism of Pb2+ biosorption by Arthrobacter sp. 12-1 were furtherly investigated in this study. Study on the growth of Arthrobacter sp. 12-1 in LB medium containing different concentration of Pb2+suggested that the highest Pb2+tolerant concentration of Arthrobacter sp. 12-1 was 800 mg/L. In water solution, 105 mg/L of Pb2+could be reduced to 2.17 mg/L by Arthrobacter sp. 12-1 within 24 h with biosorption rate of 97.93%. Microscopic investigation (atomic force microscopy and scanning electronic microscopy) combined with energy dispersive X-ray spectroscopy analysis showed that lead containing mineral was formed on the surface of cell after Pb2+sorption by Arthrobacter sp. 12-1. Further fourier transform infrared (FT- IR) analysis revealed that carboxyl, amide and phosphate groups of Arthrobacter sp. 12-1 might be involved in Pb2 + biosorption process. The results demonstrated that the Arthrobacter sp. 12-1 isolated from lead-zinc mine tailing dam had strong ability of Pb2 + resistance and biosorption, indicating an attractive prospect of practical applications in bioremediation Pb2+ contaminated water and soil environments. The present work provides much fundamental information for help in constructing feasible strategies for Pb2+bioremediation in the environment.%当前铅资源的粗放式开采和使用对环境造成了严重的污染。利用微生物修复铅污染具有费用低、易操作、环境友好等优

  19. Collective Security

    DEFF Research Database (Denmark)

    Galster, Kjeld

    Collective Security: National Egotism (Abstract) In Danish pre-World War I defence debate the notion of collective security is missing. During the early years of the 19th century, the political work is influenced by a pervasive feeling of rising tension and danger on the continent of Europe...... World War I it is not surprising that a salient feature of the defence debate is aversion against armed conflict. The Wilsonian agenda of a new system of collective security featuring prominently in the peace talks as well as in European debate generally does indeed have ramifications in Danish...... be implemented, the sooner the better. In order to accelerate peaceful development, and because their armed forces were seen rather as harmful than conducive to security, pacifist politicians believed that small states should set an example and disarm to a level just adequate for monitoring the borders so...

  20. Locals Collection

    Directory of Open Access Journals (Sweden)

    Stephen Hastings-King

    2010-03-01

    Full Text Available A locals collection is a set of parameters that are used to delimit data-mining operations. This piece uses a collection of locals from around Essex Massachusetts to shape and delimit an interrogation of post-reality in contemporary America. It explores the notion of crisis, the possibility of a crisis of empire that may or may not emerge in a media-space that does not allow crisis of empire to be mentioned and relations this maybe-crisis to the various levels of economic dysfunction that have become evident since late 2008. But mostly this piece explores ways in which particular stories about particular people do and do not link/link to these larger-scale narratives. This is the first of a potential series of locals collections that will mine the American post-real.

  1. Collective intentions

    NARCIS (Netherlands)

    Dunin-Keplicz, B; Verbrugge, L.C.

    2002-01-01

    In this paper the notion of collective intention in teams of agents involved in cooperative problem solving (CPS) in multiagent systems (MAS) is investigated. Starting from individual intentions, goals, and beliefs defining agents' local asocial motivational and informational attitudes, we arrive at

  2. Collective Bargaining.

    Science.gov (United States)

    Goldschmidt, Steven M.

    This chapter deals with the legal process by which employers and employee organizations discuss matters related to employment. The chapter is organized to reflect the initial sequence of events in the collective bargaining process. Cases are reported and analyzed in nine sections: obligation and authority to bargain; unit determination and…

  3. Cerambycidae (Coleoptera coletados à luz a 45 metros de altura, no dossel da floresta amazônica, e a descrição de quatro espécies novas Cerambycidae (Coleoptera collected with light trap at 45 meters height over an Amazon forest canopy and the description of four new species

    Directory of Open Access Journals (Sweden)

    Ubirajara R. Martins

    2006-01-01

    Full Text Available É apresentada uma relação das 69 espécies de Cerambycidae coletados a 45 m numa torre metálica de 50 m que ultrapassa a maioria das copas das árvores, num platô de terra firme, na bacia do Rio Cueiras, Estação Experimental de Silvicultura Tropical, km 14 do núcleo ZF-2 em Manaus, Amazonas, Brasil. As coletas foram realizadas de janeiro a dezembro de 2004, durante três noites de transição lunar minguante/nova de cada mês, das 18 às 6 horas. Os insetos foram capturados em um lençol iluminado com lâmpada de 250 watts, luz mista de vapor de mecúrio e lâmpada de 20 watts BLB. Foram coletados Prioninae (12 espécies, Disteniinae (uma espécie, Cerambycinae (27 espécies e Lamiinae (29 espécies. Novas espécies descritas: Physopleurus rafaeli, sp. nov. (Prioninae, Macrotomini; Oncideres tuberosa sp. nov. (Lamiinae, Onciderini, Plistonax rafaeli sp. nov. (Lamiinae, Acanthoderini e Hemiloapis mena sp. nov. (Lamiinae, Hemilophini. São apresentadas notas em Oncideres phaetusa Dillon & Dillon, 1946, chave que modifica aquela para as espécies de Physopleurus Lacordaire, 1869 e chave para as espécies de Hemiloapis Galileo & Martins, 2004.A list of 69 species of Cerambycidae collected at 45 m height in a metallic tower of 50 m height, in a "platô de terra firme", in the Cueiras River basin, "Estação Experimental de Silvicultura Tropical, km 14 do núcleo ZF-2" in Manaus, Amazonas, Brazil. The collections were carried out monthly from January to December of 2004, during three nights of lunar transition third quarter monn/new moon from 18 p.m. to 6 a.m. The insects were collected over a vertical white sheet illuminated by a 250 watts mixed light and a 20 watts black-light (BLB lamps. Were collected Prioninae (12 species, Disteniidae (one species, Cerambycinae (27 species and Lamiinae (29 species. New species described: Physopleurus rafaeli, sp. nov. (Prioninae, Macrotomini; Oncideres tuberosa sp. nov. (Lamiinae, Onciderini

  4. Collective Success or Collective Failure?

    DEFF Research Database (Denmark)

    Fayyaz, Anjum

    study of soccer village project to learn how various attempts at facilitating joint CSR action in the Pakistani football manufacturing have consistently failed in addressing international CSR compliance demands. I conclude that this form of collective failure – along with technological changes, lack...

  5. Collective instabilities

    Energy Technology Data Exchange (ETDEWEB)

    K.Y. Ng

    2003-08-25

    The lecture covers mainly Sections 2.VIII and 3.VII of the book ''Accelerator Physics'' by S.Y. Lee, plus mode-coupling instabilities and chromaticity-driven head-tail instability. Besides giving more detailed derivation of many equations, simple interpretations of many collective instabilities are included with the intention that the phenomena can be understood more easily without going into too much mathematics. The notations of Lee's book as well as the e{sup jwt} convention are followed.

  6. Abundância e sazonalidade das espécies de Hydropsychidae (Insecta, Trichoptera capturadas em armadilha luminosa no Estado do Paraná, Brasil Abundance and seasonality of Hydropsychidae species (Insccta, Trichoptera collected with light trap at Paraná State, Brazil

    Directory of Open Access Journals (Sweden)

    Luciane Marinoni

    2000-03-01

    Full Text Available During one year of the project called "Survey of the Entomological Fauna in Paraná State" (henceforth PROFAUPAR, 126,340 adult specimens of Trichoptera were collected with light trap. The individuais of the family Hydropsychidae were identified and a list of species is presented. Eighteen species in four genera were identified. From this, S. (R. discalis Flint, 1972,5. (R. paramnsis Flint, 1983;S (R. spinulosa Flint, 1972 are for the first time registered for Brazil and Leptonema sparsum (Ulmer, 1905, Macrostemum hyalinum (Pictet, 1836, S. (Smicridea albosignata Ulmer, 1907; S. (Rhyacophylax dentifera Flint, 1983; S. (R. iguazu Flint, 1983; S. (R. piraya Flint, 1983; S. (R. unguiculaia Flint, 1983; S. (R. vermiculata Flint, 1978 and S. (R. weidneri Flint, 1972, for Paraná State. Discussion about the individuais abundance and species seasonality is presented.

  7. Tetrameranthus (Annonaceae revisited including a new species

    Directory of Open Access Journals (Sweden)

    Lubbert Y.Th. Westra

    2012-04-01

    Full Text Available The taxonomic revision of the infrequently collected genus Tetrameranthus by Westra (1985 is updated. A new species is described from French Guiana and Amapá, Brazil, increasing the number of species in this genus to seven.

  8. Collective Motion

    CERN Document Server

    Czirok, A

    1999-01-01

    With the aim of understanding the emergence of collective motion from local interactions of organisms in a "noisy" environment, we study biologically inspired, inherently non-equilibrium models consisting of self-propelled particles. In these models particles interact with their neighbors by turning towards the local average direction of motion. In the limit of vanishing velocities this behavior results in a dynamics analogous to some Monte Carlo realization of equilibrium ferromagnets. However, numerical simulations indicate the existence of new types of phase transitions which are not present in the corresponding ferromagnets. In particular, here we demonstrate both numerically and analytically that even in certain one dimensional self-propelled particle systems an ordered phase exists for finite noise levels.

  9. Multi-species integrative biclustering

    OpenAIRE

    Waltman, Peter; Kacmarczyk, Thadeous; Bate, Ashley R.; Kearns, Daniel B.; Reiss, David J.; Eichenberger, Patrick; Bonneau, Richard

    2010-01-01

    We describe an algorithm, multi-species cMonkey, for the simultaneous biclustering of heterogeneous multiple-species data collections and apply the algorithm to a group of bacteria containing Bacillus subtilis, Bacillus anthracis, and Listeria monocytogenes. The algorithm reveals evolutionary insights into the surprisingly high degree of conservation of regulatory modules across these three species and allows data and insights from well-studied organisms to complement the analysis of related ...

  10. Evaluation of Caspofungin Susceptibility Testing by the New Vitek 2 AST-YS06 Yeast Card Using a Unique Collection of FKS Wild-Type and Hot Spot Mutant Isolates, Including the Five Most Common Candida Species

    DEFF Research Database (Denmark)

    Astvad, Karen M; Perlin, David S; Johansen, Helle K;

    2013-01-01

    susceptibility card to correctly identify the fks mutants from wt isolates and compared the performance to those of the CLSI and EUCAST reference methods. A collection of 98 Candida isolates, including 31 fks hot spot mutants, were included. Performance was evaluated using the FKS genotype as the "gold standard...

  11. The leaf surface strucure of the species from the subgenus Sedum of the genus Sedum L. (Crassulaceae DC. from the protected soil collections of A.V. Fomin Botanical Garden

    Directory of Open Access Journals (Sweden)

    Mykola V. Yatsenko

    2013-04-01

    Full Text Available By means of light and scanning electron microscopy (SEM the structure of leaf ’s epidermis of 8 species of genus SedumL. was investigated. A number of common (amphistomatics, anisocytic type of stomatal complex, strum cuticle and different signs have been revealed in the structure of the leaf ’s tissue. The results acquired on the basis of micromorphology of a leaf ’s epidermis can be used in the taxonomy of the investigated Sedumspecies.

  12. Invasive species

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This is a summary of management activities and research related to invasive species on Neal Smith National Wildlife Refuge between 1992 and 2009. As part of the...

  13. Biosorption of heavy metals by Pseudomonas species isolated from sugar industry.

    Science.gov (United States)

    Naz, Tayyaba; Khan, Muhammad Daud; Ahmed, Iftikhar; Rehman, Shafiq Ur; Rha, Eui Shik; Malook, Ijaz; Jamil, Muhammad

    2016-09-01

    Heavy metal-resistant bacteria can be efficient bioremediators of metals and may provide an alternative or additional method to conventional methods of metal removal. In this study, 10 bacterial isolates were isolated from soil samples of a sugar industry, located at Peshawar, Pakistan. Morphological, physiological, and biochemical characteristics of these isolates were observed. Sequence analysis (16S ribosomal RNA) revealed that isolated strains were closely related to the species belonging to the genera Pseudomonas, Arthrobacter, Exiguobacterium, Citrobacter, and Enterobacter Bacterial isolates were resistant with a minimum inhibitory concentration (500-900 ppm) to lead ion (Pb(2+)), (500-600 ppm) nickel ion (Ni(2+)), (500-800 ppm) copper ion (Cu(2+)), and (600-800 ppm) chromium ion (Cr(3+)) in solid media. Furthermore, biosorption of metals proved considerable removal of heavy metals by isolated metal-resistant strains. Pseudomonas sp. reduced 37% (Pb(2+)), 32% (Ni(2+)), 29% (Cu(2+)), and 32% (Cr(3+)) and was thus found to be most effective, whereas Enterobacter sp. reduced 19% (Pb(2+)), 7% (Ni(2+)), 14% (Cu(2+)), and 21% (Cr(3+)) and was found to be least effective. While average reduction of Pb(2+), Ni(2+), Cu(2+), and Cr(3+) by Citrobacter sp. was found to be 24%, 18%, 23%, and 27%, respectively, among recognized species. This study revealed that Pseudomonas sp. may provide a new microbial community that can be used for enhanced remediation of contaminated environment.

  14. Eighteen new oleaginous yeast species.

    Science.gov (United States)

    Garay, Luis A; Sitepu, Irnayuli R; Cajka, Tomas; Chandra, Idelia; Shi, Sandy; Lin, Ting; German, J Bruce; Fiehn, Oliver; Boundy-Mills, Kyria L

    2016-07-01

    Of 1600 known species of yeasts, about 70 are known to be oleaginous, defined as being able to accumulate over 20 % intracellular lipids. These yeasts have value for fundamental and applied research. A survey of yeasts from the Phaff Yeast Culture Collection, University of California Davis was performed to identify additional oleaginous species within the Basidiomycota phylum. Fifty-nine strains belonging to 34 species were grown in lipid inducing media, and total cell mass, lipid yield and triacylglycerol profiles were determined. Thirty-two species accumulated at least 20 % lipid and 25 species accumulated over 40 % lipid by dry weight. Eighteen of these species were not previously reported to be oleaginous. Triacylglycerol profiles were suitable for biodiesel production. These results greatly expand the number of known oleaginous yeast species, and reveal the wealth of natural diversity of triacylglycerol profiles within wild-type oleaginous Basidiomycetes. PMID:27072563

  15. ANIMALS - INDIVIDUAL - COUNTS, Displacement Volume, SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE and species abundance profile and discrete sample data collected in the South Atlantic Ocean and South Pacific Ocean on the NATHANIEL B. PALMER cruises NBP0103, NBP0104 and others as part of the Southern Ocean GLOBEC project from 2001-04-30 to 2002-09-11 (NODC Accession 0112171)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112171 includes profile, discrete sample and biological data collected aboard the NATHANIEL B. PALMER during cruises NBP0103, NBP0104, NBP0202 and...

  16. BIOMASS, ANIMALS - INDIVIDUAL - COUNTS, SPECIES IDENTIFICATION, TAXONOMIC CODE and species abundance trawl data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD and NATHANIEL B. PALMER cruises LMG0104, LMG0203 and others as part of the Southern Ocean GLOBEC project from 2001-04-30 to 2002-09-08 (NODC Accession 0112166)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112166 includes biological and trawl data collected aboard the LAURENCE M. GOULD and NATHANIEL B. PALMER during cruises LMG0104, LMG0203, NBP0104...

  17. SPECIES IDENTIFICATION - ORGANISM LENGTH and SPECIES IDENTIFICATION fish examination data collected in the North Pacific Ocean on the CHARTER/FISHING BOATS cruises FR0206-01, FR0206-02 and others as part of the NEP project from 2000-05-29 to 2002-08-18 (NODC Accession 0113968)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113968 includes biological and fish examination data collected aboard the CHARTER/FISHING BOATS during cruises FR0206-01, FR0206-02, FR0208, SE0005...

  18. PIGMENTS, SPECIES IDENTIFICATION - LIFE STAGE and SPECIES IDENTIFICATION - WET WEIGHT site samples data collected in the South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0106 and LMG0205 as part of the Southern Ocean GLOBEC project from 2001-08-06 to 2002-09-09 (NODC Accession 0112635)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112635 includes site samples and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0106 and LMG0205 in the South Pacific...

  19. SPECIES IDENTIFICATION - ORGANISM LENGTH, SPECIES IDENTIFICATION and TAXONOMIC CODE tows - plankton tows data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9505, AL9506 and others as part of the GB project from 1995-02-11 to 1999-06-24 (NODC Accession 0105586)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0105586 includes tows - plankton tows and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9505,...

  20. SPECIES IDENTIFICATION - DRY WEIGHT, SPECIES IDENTIFICATION - ORGANISM LENGTH, Condition factor, Carbon content of specimen and Nitrogen content of specimen site samples data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0106 and LMG0205 as part of the Southern Ocean GLOBEC project from 2001-07-29 to 2002-09-09 (NODC Accession 0112563)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112563 includes site samples and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0106 and LMG0205 in the South Atlantic...

  1. SPECIES IDENTIFICATION - ORGANISM LENGTH, growth rate and SPECIES IDENTIFICATION - LIFE STAGE site samples data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0106 and LMG0205 as part of the Southern Ocean GLOBEC project from 2001-07-28 to 2002-09-05 (NODC Accession 0112634)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112634 includes site samples and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0106 and LMG0205 in the South Atlantic...

  2. SPECIES IDENTIFICATION - ORGANISM LENGTH, MARINE MAMMALS, SPECIES IDENTIFICATION, body fat and other marine mammal observation data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0104, LMG0106 and others as part of the Southern Ocean GLOBEC project from 2001-05-05 to 2002-09-09 (NODC Accession 0112821)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112821 includes marine mammal observation and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0104, LMG0106, LMG0203 and...

  3. ANIMALS - INDIVIDUAL - COUNTS, Displacement Volume, SPECIES IDENTIFICATION - LIFE STAGE, TAXONOMIC CODE and species abundance profile and discrete sample data collected in the South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD cruises LMG0104 and LMG0203 as part of the Southern Ocean GLOBEC project from 2001-05-01 to 2002-05-10 (NODC Accession 0112170)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112170 includes profile, discrete sample and biological data collected aboard the LAURENCE M. GOULD during cruises LMG0104 and LMG0203 in the South...

  4. SPECIES IDENTIFICATION, TAXONOMIC CODE and species abundance tows - plankton tows data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9505, AL9506 and others as part of the GB project from 1995-02-11 to 1999-06-24 (NODC Accession 0105531)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0105531 includes tows - plankton tows and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9505,...

  5. ANIMALS - INDIVIDUAL - COUNTS, Displacement Volume, TAXONOMIC CODE, SPECIES IDENTIFICATION - SEX and species abundance tows data collected in the Gulf of Alaska and North Pacific Ocean on the CHARTER/FISHING BOATS cruises GP0401-01 and GP0401-02 as part of the NEP project from 2004-10-19 to 2004-11-08 (NODC Accession 0115259)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115259 includes tows and biological data collected aboard the CHARTER/FISHING BOATS during cruises GP0401-01 and GP0401-02 in the Gulf of Alaska and...

  6. Hybrid seine for full fish community collections

    Science.gov (United States)

    McKenna, James E.; Waldt, Emily M.; Abbett, Ross; David, Anthony; Snyder, James

    2013-01-01

    Seines are simple and effective fish collection gears, but the net mesh size influences how well the catch represents the fish communities. We designed and tested a hybrid seine with a dual-mesh bag (1/4″ and 1/8″) and compared the fish assemblage collected by each mesh. The fine-mesh net retained three times as many fish and collected more species (as many as eight), including representatives of several rare species, than did the coarser mesh. The dual-mesh bag permitted us to compare both sizes and species retained by each layer and to develop species-specific abundance correction factors, which allowed comparison of catches with the coarse-mesh seine used for earlier collections. The results indicate that a hybrid seine with coarse-mesh wings and a fine-mesh bag would enhance future studies of fish communities, especially when small-bodied fishes or early life stages are the research focus.

  7. Deep-water Holothuroidea (Echinodermata collected during the TALUD cruises off the Pacific coast of Mexico, with the description of two new species Holothuroidea (Echinodermata de mar profundo recolectadas durante las campañas TALUD frente a la costa del Pacífico mexicano, con la descripción de dos especies nuevas

    Directory of Open Access Journals (Sweden)

    Claude Massin

    2011-06-01

    Full Text Available Research cruises aboard the R/V "El Puma" were organized to collect deep-water benthic and pelagic specimens off the Pacific coast of Mexico. Seventy four specimens of Holothuroidea were collected off the Pacific coast of Mexico in depths of 377-2 200 m. The collection includes representatives of 5 of the 6 orders of Holothuroidea, 3 Dendrochirotida, 2 Dactylochirotida, 2 Aspidochirotida, 4 Elasipodida and 2 Molpadiida. Apodida were not represented. Of the 13 species recognized, 11 were identified to species level and 2, belonging to the genera Ypsilocucumis Panning, 1949, and Mitsukuriella Heding and Panning, 1954, are new to science. Five species represent new geographic or depth records. A list of Mexican localities previously and newly reported for each species are plotted on distribution maps. Environmental data, i.e., depth, temperature, and dissolved oxygen measured at the bottom level during the survey are provided. When compared with other areas of the world, the reduced number of specimens collected during this survey could be linked to the limiting effect of the Pacific Mexico Oxygen Minimum Zone. An updated checklist of species of Holothuroidea recorded below 350 m depth along the Pacific coast of Mexico is also provided totaling 31 species: 13 of these occur in the California Current area, 20 in the Gulf of California, and 15 (16 along the SW coast of Mexico.Una serie de campañas oceanográficas fue organizada a bordo del B/O "El Puma", frente a las costas del Pacífico mexicano con el propósito de recolectar ejemplares de la fauna bentónica y pelágica de aguas profundas. La recolección incluyó representantes de 5 de los 6 órdenes de Holothuroidea, i.e., 3 Dendrochirotida, 2 Dactylochirotida, 2 Aspidochirotida, 4 Elasipodida y 2 Molpadiida. Los Apodida no están representados. De las 13 especies capturadas por debajo de los 350 m de profundidad (377-2 200 m, 11 fueron identificadas hasta especie y 2 pertenecientes a los g

  8. Effect of Plant Species on Degradation of Butachlor in Rhizosphere Soils Collected from Agricultural Field%作物种类对根际土壤中丁草胺降解的影响

    Institute of Scientific and Technical Information of China (English)

    虞云龙; 杨基峰; 潘学冬; 喻景权; 杨肖娥; 樊德方

    2004-01-01

    Plant rhizosphere provides a favorable micro-ecosystem for the proliferation of soil microorganisms and therefore vegetation can promote actively microbial degradation of organic chemicals in soil. The degradation of herbicide butachlor in nonrhizosphere soil and in rhizosphere soils after vegetation of crop plants was studied. The results showed that the degradation rate of butachlor in soil was accelerated markedly after vegetation of cotton, rice, wheat, and corn plant, and the half-lives of butachlor, at concentration of 15 mg/kg, in these rhizosphere soils, were shorten by 26.6% to 57.2%, respectively, compared to those in nonrhizosphere soil. The enhancement of the degradation activity increased with species of crop plant in the order of corn, wheat, rice and cotton. Although butachlor at high concentration (50 mg/kg) showed some degree of inhibition, the degradation was also enhanced by vegetation of the crop plants. Measurement of the growth of butachlor degraders during the degradation experiment period indicated that the number of butachlor degraders in rhizosphere soils was larger than that in nonrhizosphere soil. Our results suggest that vegetation of a certain crop plants may accelerate removal of residual herbicides and avoid residual toxicity to crops.%研究了根际和非根际土壤中除草剂丁草胺的降解.结果表明,棉花、水稻、小麦和玉米的种植明显促进丁草胺的降解,15 mg/kg丁草胺的降解半衰期缩短26.6%~57.2%,这种促进作用与作物种类有关,玉米、小麦、水稻、棉花依次增强.50 mg/kg丁草胺的降解有所受抑制,但作物种植仍显示良好的促进作用.作物根际丁草胺降解菌的测定结果显示,根际土壤中丁草胺降解菌的数量大于非根际土壤,作物种植对丁草胺降解的促进作用源于根际丰富的降解菌.

  9. Nitrogen species

    Science.gov (United States)

    Harries, J. E.; Brasseur, G.; Coffey, M. T.; Fischer, H.; Gille, J.; Jones, R.; Louisnard, N.; McCormick, M. P.; Noxon, J.; Owens, A. J.

    Total odd nitrogen, NO(y), may be defined as the sum of all active nitrogen species that interchange photochemically with one another on a time scale of the order of weeks or less. As noted, NO + NO2 reactions dominate the processes controlling the ozone balance in the contemporary stratosphere. The observational data from non-satellite platforms are reviewed. The growth in available satellite data in the past four years is considered. Some of the most important scientific issues are discussed, taking into account new results from atmospheric models (mainly 2-D). The model results are compared with the observational data.

  10. 75 FR 66119 - Proposed Information Collection; International Conservation Grant Programs

    Science.gov (United States)

    2010-10-27

    ... Species, and Amphibians in Decline). Currently, information that we collect for Critically Endangered... collection for Amphibians in Decline grants is approved under OMB Control No. 1018-0144, which...

  11. GENETIC VARIABILITY OF THE COLOMBIAN COLLECTION OF LULO (SOLANUM QUITOENSE LAM. AND RELATED SPECIES OF SECTION LASIOCARPA VARIABILIDAD GENÉTICA DE LA COLECCIÓN COLOMBIANA DE LULO (SOLANUM QUITOENSE LAM. Y ESPECIES RELACIONADAS DE LA SECCIÓN LASIOCARPA

    Directory of Open Access Journals (Sweden)

    Paola Andrea Fory Sánchez

    2010-12-01

    Full Text Available An AFLP genetic variability study of the Colombian collection of lulo Solanum quitoense and related species of section Lasiocarpa was carried out. The aim was to elucidate the genetic polymorphism of such collection and interspecific affinities. Two primer combinations, E-ACG/M-CAT and E-ACG-M-CTC, were chosen out of 30 evaluated combinations based on their high expression levels of polymorphism. The UPGMA dendrogram, obtained through similarity analysis, exhibited systemic power with discrimination at species level and between the groups of Andean and Amazonian taxa from section Lasiocarpa, with a clear separation between Lasiocarpa species and outgroup taxa. Clustering patterns regarding the geographic origin of the accessions, as well as between materials of the S. quitoense botanical varieties septentrionale and quitoense were not evident. Wider genetic variability was observed in the wild section Lasiocarpa species than in the cultivated ones S. quitoense and S. sessiliflorum. The interespecific hybrids between S. hirtum and S. quitoense and backcrosses of these with S. quitoense exhibited greater variability in comparison to S. quitoense. The above, indicated the feasibility of the use of S. hirtum to broaden the genetic base of the cultivated species, with potentiality of S. psudolulo and S. vestissimum for the same purpose. The results obtained with the multiple analysis of correspondence were in agreement with those of the similarity index analysis, and the neighbor joining analysis with high “bootstrap” values, which indicates that the support of each cluster for the studied species is well represented.Se realizó un estudio de la variabilidad genética de la colección colombiana de lulo Solanum quitoense Lam y especies relacionadas de la sección Lasiocarpa, por medio de marcadores AFLP, con el fin de conocer el polimorfismo y las afinidades entre materiales y taxa. Para tal fin se emplearon marcadores moleculares AFLP, y se

  12. 发酵产菊糖果糖转移酶的培养基设计及菌体生长动力学研究%Optimization of Inulin Fructotransferase-producing Medium and Determination of Cell Growth Kinetic Parameter for Arthrobacter ureafaciens SK-8.001

    Institute of Scientific and Technical Information of China (English)

    卢峥嵘; 赵萌; 沐万孟; 张涛; 江波

    2009-01-01

    In this paper,the optimal inulin fructotransferase-producing medium and fermentation kinetic parameters of Arthrobacter ureafaciens SK -8.001 were studied. The recipes of optimal media included 2. 5% inulin,0. 3% NaN0_3,0. 1% yeast extract,0. 01% MgSO_4,0. 04% KH_2P0_4,0. 001% FeSO_4·7H_2O. The maximum enzyme activity reached 19. 85 U/mL,which was 2. 04 fold higher than in initial media. The study on the fermentation process in the optimal media suggested the right time to add inducers into the media was 12 h or 66th hours during the fermentation. The cell growth kinetic model for SK-8.001 in batch fermentation was X (t) = 9. 356 05/ [1 + exp~((4.4222-0.1102l)) ].%对1株产菊糖果糖转移酶(inulin fructotransferase)的金黄色节杆菌(Arthrobacter ureafaciens)SK-8.001的产酶培养基进行了优化,同时对其在分批发酵过程中培养基组分变化和菌体生长动力学进行了研究.所得到的改进型产酶培养基配方为25 g/L菊糖,3 g/L NaNO_3,1g/L酵母膏,0.1 g/L MgSO_4,0.4g/L KH_2PO_4,0.01g/LFeSO_4·7H_2O.在此培养基中的最高酶活达到19.85 U/mL,较初始培养基提高了2.04倍.对在此培养基中Sk-8.001的发酵过程研究发现发酵12 h和66 h是较为理想的诱导物添加时刻.得到SK-8.001在优化培养基中分批培养的菌体生长动力学模型为:X(t)=9.356 05/[1+exp~((4.4222-0.1102:))].

  13. The Effects of Heterologous Expression of groEL from Arthrobacter simplex on the Resistance Performance of Escherichia coli%简单节杆菌groEL基因表达对大肠杆菌抗逆性能的影响

    Institute of Scientific and Technical Information of China (English)

    王艳霞; 王红玲; 王敏; 骆健美

    2016-01-01

    Arthrobacter simplex,a strain with steroid C1,2 dehydrogenation ability,has been widely used in the steroid industry, usually adding ethanol in the transforming system may catalyze the dissolution of hydrophobic substrates. Our prior work by LC-MS/MS and bioinformatics analysis found that heat shock protein(HSP)GroEL was closely correlated to the cell adaptive behavior under ethanol stress condition. Based on this concept,groEL gene was cloned by PCR while usingA. simplexTCCC 11037 genome as a template. The results showed that the homologies of nucleotide and amino acid sequence of GroEL in the strain were the highest with that fromNocardioides sp. JS614 by the ratio of 89% and 95%,respectively. Then its heterologous expression was conducted in Escherichia coli BL21(DE3)with the vector pET-22b (+),and the results showed that the recombinant strain presented the significant increase on the survival performance under the shock condition with high-concentration of methanol,hypertonicity and superacid,as well as the growth performance under the proper stresses of them. The study was the first report on the cloning and expression of genegroEL fromA. simplex,and also provided fundamental data for exploring the biological function of HSP protein GroEL from A. simplex.%以简单节杆菌(Arthrobacter simplex)TCCC 11037基因组为模板,通过PCR方法进行groEL基因克隆,结果表明,该菌株中GroEL的核苷酸和氨基酸序列与Nocardioidessp. JS614来源的GroEL同源性最高,分别为89%和95%。通过pET-22b(+)将其在大肠杆菌BL21(DE3)中进行异源表达,结果表明,重组菌株在甲醇、高渗和强酸这3种压力高浓度冲击条件下的存活能力和适当压力条件下的生长性能均明显提高。

  14. Leaf Collection Posting Log

    Data.gov (United States)

    Montgomery County of Maryland — This dataset contains leaf collection dates for area and subarea where leaf collection service is provided by Montgomery County Department of Transportation. Update...

  15. Five new species of Baeus Haliday, 1833 (Hymenoptera: Platygastroidea: Scelioninae) from Brazil with an updated key to Neotropical species.

    Science.gov (United States)

    Araujo, Rodrigo De Oliveira; Vivallo, Felipe; Araujo, Cristina De Oliveira

    2013-01-01

    The species of the genus Baeus are small endoparasitoids wasps that attack spiders' egg sacs. Although there are data of occurrence in several biogeographical regions, their distribution records are scarce, especially due to their small size, mak- ing difficult to collect them in natural environments. In this paper, five new species of Baeus are described as results of collections made in southeastern Brazil: Baeus fluminensis new species, B. itatiaiaensis new species, B. leucophthalmus new species, B. melanocephalus new species and B. morenus new species. An updated key to the known Neotropical spe- cies of the genus is also provided.

  16. Espécies de flebotomíneos (Diptera, Psychodidae coletadas em ambiente urbano em municípios com transmissão de Leishmaniose Visceral do Estado de Mato Grosso do Sul, Brasil Species of phlebotomines (Diptera, Psychodidae collected in urban municipalities with transmission of visceral leishmaniasis in Mato Grosso do Sul State, Brazil

    Directory of Open Access Journals (Sweden)

    Paulo Silva de Almeida

    2010-06-01

    providing data for the leishmaniasis control programmes. The collections were undertaken with automatic light traps, installed monthly on three consecutive nights, from 06:00 pm to 6:00 am over a two-year period. A total of 34,799 sand fly specimens, belonging to 36 species, were collected. Lutzomyia longipalpis (Lutz & Neiva, 1912 and Nyssomyia whitmani (Antunes, 1939 were the most widely dispersed species, the former was found in 16 and the latter in 15 out of the 18 municipalities investigated, however, Lu. longipalpis was predominant in all the municipalities and Ny. whitmani was not predominant in any of them. Corumbá contributed with 40.92% of the specimens and Lutzomyia cruzi (Mangabeira, 1938 with 92.50% of the specimens captured there. It is suggested that the species of Lutzomyia genus and Ny. whitmani may be involved in the transmission of leishmaniasis in Mato Grosso do Sul state.

  17. 76 FR 46837 - Endangered and Threatened Species Permit Applications

    Science.gov (United States)

    2011-08-03

    ... recovery purposes to collect voucher specimens and seeds from the following species within New Mexico... Fish and Wildlife Service Endangered and Threatened Species Permit Applications AGENCY: Fish and... with endangered species under the Endangered Species Act of 1973, as amended (Act). The Act...

  18. Chromosome numbers of some Angiospermae collected in Cameroun and the Ivory Coast

    NARCIS (Netherlands)

    Gadella, Th.W.J.

    1969-01-01

    The chromosome numbers of 16 species of Angiosperms, collected in Cameroun and the Ivory Coast, were determined. The numbers given for 14 species are new, in the remaining species the results of other authors could be confirmed.

  19. Innovation in the collective brain.

    Science.gov (United States)

    Muthukrishna, Michael; Henrich, Joseph

    2016-03-19

    Innovation is often assumed to be the work of a talented few, whose products are passed on to the masses. Here, we argue that innovations are instead an emergent property of our species' cultural learning abilities, applied within our societies and social networks. Our societies and social networks act as collective brains. We outline how many human brains, which evolved primarily for the acquisition of culture, together beget a collective brain. Within these collective brains, the three main sources of innovation are serendipity, recombination and incremental improvement. We argue that rates of innovation are heavily influenced by (i) sociality, (ii) transmission fidelity, and (iii) cultural variance. We discuss some of the forces that affect these factors. These factors can also shape each other. For example, we provide preliminary evidence that transmission efficiency is affected by sociality--languages with more speakers are more efficient. We argue that collective brains can make each of their constituent cultural brains more innovative. This perspective sheds light on traits, such as IQ, that have been implicated in innovation. A collective brain perspective can help us understand otherwise puzzling findings in the IQ literature, including group differences, heritability differences and the dramatic increase in IQ test scores over time.

  20. Espécies selvagens do gênero arachis: observações sôbre os exemplares da coleção da seção de citologia Wild species of Arachis: observations on some plants in the cytology department collection

    Directory of Open Access Journals (Sweden)

    Cândida H. T. M. Conagin

    1962-01-01

    Full Text Available Uma coleção viva de espécies selvagens de amendoim (Arachis spp. vem sendo há alguns anos mantida pela Seção de Citologia para realizar pesquisas com êsse gênero e colaborar com a Seção de Oleaginosas no melhoramento das variedades econômicas. Neste trabalho é apresentada a descrição de dez espécies cuja classificação botânica é conhecida. Algumas como Arachis villcsulicarpa, A. diogoi e A. monticola são de porte ereto. Arachis repens, A. glabrata, A. hagenbeckii e A. villosa são rasteiros; é também rasteiro uma espécie ainda não identificado, de número V. 360. A presente descrição é apenas um subsidio para melhor conhecimento das espécies. Do mesmo modo que foi feito poro as variedades do amendoim cultivado, Arachis hypogaea L. (3, também para as espécies selvagens foram estudados as principais características dos exemplares da coleção, procurando delimitar cada grupo de plantas, considerando as condições locais de Campinas.Since some years ago the Cytology Departament maintains a plant collection of wild species of Arachis with which many basic researches have been conducted. This paper presents the description of ten species which are already botanically classified. Some are erect as Arachis villosalicarpa, A. diogoi and A. monticola; others are of the runner type as Arachis repens, A. glabrata, A. hagenbekii and A. villosa. A not yet identified species, called V. 360, is of the runner type too. The present description contributes to a better knowledge of the species in the some way as it has been done before for the commercial varieties of Arachis hypogaea L. The principal characteristics of the wild plants and the measurements of their parts hove been listed here, looking for a delimitation of each group of plants far the local conditions of Campinas.

  1. A new species of Pseudaulacaspis MacGillivray, 1921 from China (Hemiptera, Coccoidea, Diaspididae with a key to Chinese species

    Directory of Open Access Journals (Sweden)

    Jiu-Feng Wei

    2012-07-01

    Full Text Available A new species of armored scale, Pseudaulacaspis zhenyuanensis Wei & Feng, sp. n. is described and illustrated from specimens collected on Spermadictyon suaveolens in China. A key to armored scale species known from China is provided.

  2. A new species of Aulacaspis Cockerell, 1893 from China with a key to Chinese species (Hemiptera, Coccoidea, Diaspididae

    Directory of Open Access Journals (Sweden)

    Jiufeng Wei

    2016-09-01

    Full Text Available A new species of armored scale insect, Aulacaspis zunyiensis sp. n. is described and illustrated from collections on cycads in China. A key to the Aulacaspis species known from China is provided.

  3. Electronic collection management

    CERN Document Server

    Mcginnis, Suzan D

    2013-01-01

    Build and manage your collection of digital resources with these successful strategies! This comprehensive volume is a practical guide to the art and science of acquiring and organizing electronic resources. The collections discussed here range in size from small college libraries to large research libraries, but all are facing similar problems: shrinking budgets, increasing demands, and rapidly shifting formats. Electronic Collection Management offers new ideas for coping with these issues. Bringing together diverse aspects of collection development, Electronic Collection

  4. The Jean Gutierrez spider mite collection

    Directory of Open Access Journals (Sweden)

    Alain Migeon

    2015-03-01

    Full Text Available The family Tetranychidae (spider mites currently comprises 1,275 species and represents one of the most important agricultural pest families among the Acari with approximately one hundred pest species, ten of which considered major pests. The dataset presented in this document includes all the identified spider mites composing the Jean Gutierrez Collection hosted at the CBGP (Montferrier-sur-Lez, France, gathered from 1963 to 1999 during his career at the Institut de Recherche pour le Développement (IRD. It consists of 5,262 specimens corresponding to 1,564 occurrences (combination species/host plant/date/location of 175 species. Most specimens were collected in Madagascar and other islands of the Western Indian Ocean, New Caledonia and other islands of the South Pacific and Papuasia. The dataset constitutes today the most important one available on Tetranychidae worldwide.

  5. The Jean Gutierrez spider mite collection.

    Science.gov (United States)

    Migeon, Alain

    2015-01-01

    The family Tetranychidae (spider mites) currently comprises 1,275 species and represents one of the most important agricultural pest families among the Acari with approximately one hundred pest species, ten of which considered major pests. The dataset presented in this document includes all the identified spider mites composing the Jean Gutierrez Collection hosted at the CBGP (Montferrier-sur-Lez, France), gathered from 1963 to 1999 during his career at the Institut de Recherche pour le Développement (IRD). It consists of 5,262 specimens corresponding to 1,564 occurrences (combination species/host plant/date/location) of 175 species. Most specimens were collected in Madagascar and other islands of the Western Indian Ocean, New Caledonia and other islands of the South Pacific and Papuasia. The dataset constitutes today the most important one available on Tetranychidae worldwide.

  6. Study of the inorganic constituents in different species of Casearia medicinal plant collected in distinct regions of the Atlantic Forest, SP State, Brazil; Estudo sobre os constituintes inorganicos presentes em diferentes especies da planta medicinal do genero Casearia coletadas em regioes distintas da Mata Atlantica, SP

    Energy Technology Data Exchange (ETDEWEB)

    Yamashita, Celina Izumi

    2006-07-01

    The use of medicinal plants in the treatment of diseases has increased significantly in the last years, as has research concerning chemical characterization of these plants. In this study, inorganic constituents were determined in leaves and in extracts from three medicinal plant species of the Casearia genus (C. sylvestris, C. decandra and C. obliqua) collected in distinct regions of the Atlantic Forest, SP. The elemental compositions of the soils in which these plants were grown were also determined. Traditionally, these plants are used due to their antiinflammatory, antiacid, antiseptic and cicatrizing properties. The antiulcer and the antitumor activities of the Casearia genus and its capacity to neutralize snake and bee venoms, have also been scientifically confirmed. The analytical methodology used was neutron activation analysis. Long and short irradiation periods of the samples and the standards were carried out at IPEN's IEA-R1 nuclear research reactor. In the leaf K was found at the percentage levels, Ca, Cl, Mg and Na at mg g{sup -1} levels and the elements Br, Fe, Mn, Rb and Zn at the {mu}g g{sup -1} levels. As, Co, Cr, Cs, La, Sb, Sc and Se at the ng g{sup -1} levels. Results obtained in the extracts indicated that the same elements present in the leaves are also found in their extracts. The comparison between the inorganic composition of Casearia sylvestris leaves collected from three different regions of the Atlantic Forest showed that the elemental concentrations in the plants leaves varied depending on the place where they were grown. Different Casearia species cultivated in a same region presented similar elemental compositions. Based on these findings it can be concluded that the studies about the pharmacological effect of Casearia genus plants grown in different types of soil are of great importance. The quality of the obtained results was assured by the analyses of the certified reference materials NIST 1573a Tomato Leaves, NIST 1515 Apple

  7. Clinical hematology of rodent species.

    Science.gov (United States)

    Pilny, Anthony A

    2008-09-01

    Pet rodents, such as rats, guinea pigs, and chinchillas, differ from more traditional companion animal species in many aspects of their hematologic parameters. Animals within this order have much diversity in size, anatomy, methods of restraint, and blood collection technique. Appropriate sample collection is often the most challenging aspect of the diagnostic protocol, and inappropriate restraint may cause a stress response that interferes with blood test results. For many of these patients, sedation is required and can also affect results as well. In most cases, however, obtaining a standard database is necessary and very possible when providing medical care for this popular group of pets. PMID:18675732

  8. Thromboelastography in Selected Avian Species.

    Science.gov (United States)

    Strindberg, Sophie; Nielsen, Tenna W; Ribeiro, Ângela M; Wiinberg, Bo; Kristensen, Annemarie T; Bertelsen, Mads F

    2015-12-01

    Currently available assay methods and reagents are not optimized for evaluating avian hemostasis; therefore, assessing avian coagulopathies is challenging. Recently, thromboelastography (TEG), which measures the viscoelastic properties of blood, has been used clinically in mammalian species to diagnose and characterize hemostatic disorders. To evaluate TEG in healthy individuals of 6 avian species, we modified existing mammalian TEG protocols to allow analysis of citrated, avian whole-blood samples collected from scarlet ibis (Eudocimus ruber) (n = 13), American flamingos ( Phoenicopterus ruber ) (n = 13), helmeted Guinea fowl ( Numida meleagris ) (n = 12), Amazon parrots (Amazona species) (n = 9), Humboldt penguins ( Spheniscus humboldti ) (n = 6), and domestic chickens (n = 16). Activated partial thromboplastin time, prothrombin time, and fibrinogen were measured as a means of comparison. Regardless of the mode of activation, clot formation in the species studied was markedly delayed compared with mammals. Because of prolonged reaction time (14.7-52.7 minutes) with kaolin and diluted tissue factor, undiluted human tissue factor was used in all avian samples because it provided the shortest reaction time. Species differed significantly in reaction time (P = .007), clotting rate (P < .001), rate of clot formation (α angle; P < .001), and maximum amplitude (P < .001) values, indicating that species-specific reference intervals are necessary. Based on these results, TEG with specific reference intervals could prove useful in evaluating avian hemostatic disorders. PMID:26771317

  9. Towards modern petrological collections

    NARCIS (Netherlands)

    Kriegsman, L.M.

    2004-01-01

    Petrological collections result from sampling for academic research, for aesthetic or commercial reasons, and to document natural diversity. Selection criteria for reducing and enhancing collections include adequate documentation, potential for future use, information density, time and money investe

  10. Calibrating collective commitments

    NARCIS (Netherlands)

    Dunin-Keplicz, B; Verbrugge, R; Marik,; Muller, J; Pechoucek, M

    2003-01-01

    In this paper we aim to formally model the strongest motivational attitude occurring in teamwork, collective commitment. First, building on our previous work, a logical framework is sketched in which social commitments and collective intentions are formalized. Then, different versions of collective

  11. The Undergraduate Library Collection.

    Science.gov (United States)

    Stewart, Rolland C.

    The development of undergraduate library collections is shown under two aspects: (1) the formation of the basic collection of the Undergraduate Library of the University of Michigan, and (2) the problems, practical and theoretial, encountered in the day-to-day effort to maintain the collection. The budget is the sire of all selection criteria.…

  12. A new species of Ptilomymar (Hymenoptera, Mymaridae and a key to the described species

    Directory of Open Access Journals (Sweden)

    Xiangxiang Jin

    2014-09-01

    Full Text Available Ptilomymar dianensis sp. n. (Hymenoptera, Mymaridae from southwest China is described and illustrated. A key to the six described species is given. The type specimens are deposited in the insect collections of Northeast Forestry University, China.

  13. Sarcophyton andamanensis, a new species of soft coral from Andaman Islands

    Digital Repository Service at National Institute of Oceanography (India)

    Jayasree, V.; Bhat, K.L.; Parulekar, A

    A systematic and morphological description of a new species of soft coral, Sorcophyton andamanensis collected from Andaman Islands is given. A comparative study made between the new species of sarcophyton and other related species along with its...

  14. Two new species of mealybugs (Hemiptera, Coccoidea, Pseudococcidae from Iran

    Directory of Open Access Journals (Sweden)

    Masumeh Moghaddam

    2010-04-01

    Full Text Available Polystomophora arakensis Moghaddam and Phenacoccus salviacus Moghaddam are described and illustrated in detail from Iran. The species P. arakensis was collected from the roots of Atraphaxis sp. (Family: Polygonaceae and P. salviacus was collected from the leaves of Salvia bracteata (Family: Labiatae. The genera Phenacoccus and Polystomophora are briefly reviewed and a key to the Iranian species of Phenacoccus is provided.

  15. 球形节杆菌C224分批发酵2-酮基-D-葡萄糖酸的条件优化及其动力学模型的构建%Optimization of 2-keto-D-gluconic acid batch fermentation by Arthrobacter globiformis C224 and its kinetics

    Institute of Scientific and Technical Information of China (English)

    孙文敬; 高培玲; 魏转; 崔凤杰; 周延政; 滕文华; 刘敬泽

    2013-01-01

    In the present study,the operation parameters including aeration rate and initial glucose concentration during 50-L batch fermentation were optimized to increase the 2-keto-D-gluconic acid (2KGA) productivity from rice starch hydrolysate by Arthrobacter globiformis C224.The kinetic models for describing the cell growth,2KGA production and glucose consumption were proposed by using Logistic/Luedeking-Piret equations and mass balance calculation.Results showed that the 2KGA yield decreased slightly and its productivity lowered significantly when the aeration rate was below 1.5 v · v-1 · m-1 The initial glucose concentrations varying from 120.0 g/L to 180.0 g/L were optimal.Under the optimized conditions,the productivities and yields reached to 6.36 ~6.54 g/(L · h) and 0.96 ~0.97 g/g,respectively.Those proposed models could fit the predictive values well with the obtained experimental data.The determination coefficients (R2) of all models were over 0.95,which also indicated that theses models could elucidate the 2KGA metabolic characteristics of Arthrobacter globiformis C224.%通过优化发酵条件,提高球形节杆菌C224菌株利用大米淀粉水解糖分批发酵2-酮基-D-葡萄糖酸的生产强度,并在此基础上构建其发酵动力学模型.在50 L的发酵罐上考察了通气量与葡萄耱浓度对2-酮基-D-葡萄糖酸发酵的影响,并基于Logistic方程、Luedeking-Piret方程和物料平衡计算分别构建了菌体生长、产物形成和底物消耗的动力学模型.研究结果表明,通气量低于1.5 v·v-1·m-1时,发酵生产强度明显减小,糖酸转化率有所降低;发酵培养基中的葡萄糖浓度以120.0~180.0 g/L为宜,过高或过低对生产强度和糖酸转化率均有不利影响.在适宜的发酵条件下,球形节杆菌C224菌株分批发酵生产2-酮基-D-葡萄糖酸的生产强度达6.36~6.54 g/(L h),糖酸转化率为0.96 ~ 0.97 g/g.所构建动力学模型的计算值与实验值拟合效果

  16. Solar energy collection system

    Science.gov (United States)

    Selcuk, M. K. (Inventor)

    1977-01-01

    An improved solar energy collection system, having enhanced energy collection and conversion capabilities, is delineated. The system is characterized by a plurality of receivers suspended above a heliostat field comprising a multiplicity of reflector surfaces, each being adapted to direct a concentrated beam of solar energy to illuminate a target surface for a given receiver. A magnitude of efficiency, suitable for effectively competing with systems employed in collecting and converting energy extracted from fossil fuels, is indicated.

  17. Alien species on the coasts of Turkey

    Directory of Open Access Journals (Sweden)

    M.E. CINAR

    2012-12-01

    Full Text Available The compilation of data on alien species reported from the Turkish coasts yielded a total of 263 species belonging to 11 systematic groups, of which Mollusca had the highest number of species (85 species, followed by Crustacea (51, fishes (43 and phytobenthos (39. The Black Sea is represented by a total of 20 alien species, the Sea of Marmara by 48 species, the Aegean Sea by 98 species and the Levantine Sea by 202 species. The majority of aliens found in the Black Sea and the Sea of Marmara were transported via shipping, whereas the Levantine coast is extensively subjected to Lessepsian migration. Benthic habitats (soft and hard substrata comprise 76% of the total alien species and the pelagic environment is inhabited by thirty-nine species. Almost 50% of aliens collected from the Turkish coasts were found only at 0-10 m depth. Eight species occur at depths deeper than 100 m. The impacts of aliens on the benthic and pelagic ecosystems are presented.

  18. Collecting Taxes Database

    Data.gov (United States)

    US Agency for International Development — The Collecting Taxes Database contains performance and structural indicators about national tax systems. The database contains quantitative revenue performance...

  19. Agroforestry Species Switchboard

    DEFF Research Database (Denmark)

    Kindt, R.; John, I.; Ordonez, J.;

    2016-01-01

    The current version of the Agroforestry Species Switchboard documents the presence of a total of 26,135 plant species (33,813 species including synonyms) across 19 web-based databases. When available, hyperlinks to information on the selected species in particular databases are provided. In total...

  20. A new species of Zamischus (Hymenoptera, Cynipoidea, Figitidae from Brazil

    Directory of Open Access Journals (Sweden)

    Norma Díaz

    2011-12-01

    Full Text Available A new species of Zamischus (Hymenoptera, Cynipoidea, Figitidae from Brazil. A new species of Zamischus from Brazil is described and diagnosed. The species is closely related to Z. brasiliensis but differs in the morphology of antennae and scutellum. Z. aquilesi sp. nov. was collected via Malaise trapping in a tobacco field in Santa Cruz do Sul, Rio Grande do Sul.

  1. Dianthus aticii, a new species from Turkey (Caryophyllaceae

    Directory of Open Access Journals (Sweden)

    Ergin Hamzaoğlu

    2015-04-01

    Full Text Available During the taxonomic revision of the Turkish Dianthus species, specimens collected from Bilecik, Seben (Bolu, and Nallıhan (Ankara were discovered that represent a new species. Its description, images, chorology, ecology, and threat category are provided. It was compared with a closely related species, D. zonatus, and differences are based on its general morphology and seed micromorphology.

  2. Determination of Tannins of Three Common Acacia Species of Sudan

    OpenAIRE

    Isam Eldin Hussein Elgailani; Christina Yacoub Ishak

    2014-01-01

    The objective of this study is to analyze and compare tannins of three common Acacia species of Sudan, since vegetable tannins are important in leather industry. Acacia nilotica and Acacia seyal samples were collected from Sunt Forest in Khartoum State, while Acacia senegal samples were collected from the Debabat Forest in South Kordofan State. Bark samples from bulk collections of the three Acacia species were extracted with boiled deionized water. The amount of tannins present in these bulk...

  3. COLLECTIVE-FIELD ACCELERATION

    Energy Technology Data Exchange (ETDEWEB)

    Sessler, Andrew M.

    1969-07-04

    Diverse methods proposed for the acceleration of particles by means of collective fields are reviewed. A survey is made of the various currently active experimental programs devoted to investigating collective acceleration, and the present status of the research is briefly noted.

  4. Preparing collections for digitization

    CERN Document Server

    Bulow, Anna E

    2010-01-01

    Most libraries, archives and museums are confronting the challenges of providing digital access to their collections. This guide offers guidance covering the end-to-end process of digitizing collections, from selecting records for digitization to choosing suppliers and equipment and dealing with documents that present individual problems.

  5. Metals in Mediterranean aquatic species

    International Nuclear Information System (INIS)

    Highlights: • Study on metals in Mediterranean fish and fishery products. • Data collected for several contaminants in wild and farmed species of commercial interest. • Samples compliance with EU regulatory limits. • Identification of Mediterranean Sea areas showing background concentrations. • An interpretation of the chemical pollution issue of Marine Framework Strategy Directive. - Abstract: Metals such as arsenic (As), cadmium (Cd), copper (Cu), chromium (Cr), nickel (Ni), lead (Pb), vanadium (V), have been determined in species of Mediterranean marine organisms collected from areas supposed to be at background contamination levels. The Inductively Coupled Plasma Mass Spectrometry (ICP-MS) approach was adopted for the determination of all the metals. Arsenic, Cd and Pb determined in the 42 samples, do not exceed the pertinent maximum level except a sample of hake. In wild fish, the concentration range for Cr, Ni, V and Cu was, respectively: 0.07–0.09, 87.6–124, 0.022–0.075 and 0.79–1.74 μg/g fresh weight (fw). The farmed fish samples show concentration levels below the wild fish ones, except for Cr which range at the same levels. Cadmium and Pb show a high sample number under the quantification limit. The elements do not bio-magnify among the species considered and appear to show low variations in relation to organisms’ position in the food chain and at sampling sites

  6. Debt collection project report

    Energy Technology Data Exchange (ETDEWEB)

    1980-05-01

    In October 1979 the Office of Management and Budget initiated a review of debt collection within the Federal Government. A DOE Debt Collection Project Team was established, and seven activites were selected for review. These were Albuquerque Operations Office; Bonneville Power Administration; Chicago Operations and Regional Office; Naval Petroleum Reserves, California; Oak Ridge Operations Office; Washington Financial Services Division; and Western Area Power Administration. The team visited each of these activities to collect data on the size, age, and types of receivables managed and procedures for billing, aging, and handling overdue accounts. Various deficiencies were found to exist at several of the DOE entities that are not consistent with good management practices in the performance of their debt collection functions. Also, the Debt Collection Project Team identified a wide variation in the procedures followed by DOE activities in the management of accounts receivable, and a wide variation in the effectiveness of the debt management functions. 1 figure, 17 tables. (RWR)

  7. Digital Audio Collections

    Directory of Open Access Journals (Sweden)

    Jason Tenter

    2010-11-01

    Full Text Available

    This paper is about the possibility of libraries creating digital music or audio collections based on the current state of the digital music industry, and in comparison with the difficulties librarians have found in adding e-books to collections. In comparing the e-book and digital music markets, factors such as digital rights management (DRM and the differences in both markets’ relationships with customers are examined. This juxtaposition suggests that where e-books have been difficult to include in library collections because publishers want to maintain control over their content, music publishers have had to resign some of the control over their products because of file-sharing, and so may work with libraries to develop these collections in a more constructive way than e-book venders. At the end of the paper, some models are suggested for developing these collections.

  8. Checklist of collected plants from the Fish Springs study area

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This checklist contains 34 families and 99 species of plants which were identified from collections made in marshes at Fish Springs study area.

  9. Virulence of Fusarium species to alfalfa seedlings

    OpenAIRE

    Krnjaja Vesna; Lević Jelena; Ivanović M.; Tomić Zorica P.

    2005-01-01

    In in vitro conditions, virulence of 91 isolates of species Fusarium genus (F. oxysporum, F. solani, F. acuminatum, F. equiseti, F. arthrosporioides, F. prolifera- tum, F. avenaceum, F. semitectum, F. tricinctum, F. sporotrichioides and F. graminearum) towards alfalfa seedlings was investigated. Isolates of investigated species originated from diseased alfalfa plants collected at four locations in Serbia based on symptoms of wilting caused by Fusarium and root rotting. Pathogenicity and virul...

  10. Virulence of Fusarium species to alfalfa seedlings

    OpenAIRE

    Krnjaja Vesna; Lević Jelena T.; Ivanović Mirko; Tomić Zorica P.

    2005-01-01

    In in vitro conditions, virulence of 91 isolates of species Fusarium genus (F. oxysporum, F. solani, F. acuminatum, F. equiseti, F. arthrosporioides, F. proliferatum, F. avenaceum, F. semitectum, F. tricinctum, F. sporotrichioides and F. graminearum) towards alfalfa seedlings was investigated. Isolates of investigated species originated from diseased alfalfa plants collected on four locations in Serbia based on symptoms of wilting caused by fusarium and root rotting. Pathogenicity and virulen...

  11. The Rhoton Collection.

    Science.gov (United States)

    Sorenson, Jeffrey; Khan, Nickalus; Couldwell, William; Robertson, Jon

    2016-08-01

    The Rhoton Collection is an archive of Dr. Al Rhoton Jr.'s anatomical images and video lectures, as well as an anatomical reference. In an effort to maximize the educational impact of these teaching materials, web-based technologies are used to dynamically format this material for a variety of devices ranging from cellular phones to projectors. Surgical cases are cross-referenced to further enhance the usefulness of this collection, which is available at http://rhoton.ineurodb.org. The features of the Rhoton Collection website are described in this article. PMID:27319307

  12. Collective dynamics at RHIC

    International Nuclear Information System (INIS)

    The strong collective flow effects, 2> and t>, observed at RHIC (√SNN = 130 GeV) is discussed. It is shown that part of the collectivity could have already developed at partonic stage. To 'see' the partonic effects directly, measurements of multi-strange baryons like Ξ, Ω and charmed particles like J/ψ transverse momentum distributions are important. They provide one of the possible keys to the discovery of collective modes with the partonic (quarks and gluons) degrees of freedom. (author)

  13. Blind Collective Signature Protocol

    Directory of Open Access Journals (Sweden)

    Nikolay A. Moldovyan

    2011-06-01

    Full Text Available Using the digital signature (DS scheme specified by Belarusian DS standard there are designed the collective and blind collective DS protocols. Signature formation is performed simultaneously by all of the assigned signers, therefore the proposed protocols can be used also as protocols for simultaneous signing a contract. The proposed blind collective DS protocol represents a particular implementation of the blind multisignature schemes that is a novel type of the signature schemes. The proposed protocols are the first implementations of the multisignature schemes based on Belarusian signature standard.

  14. Introduction of some Odonata species (Insecta) from northern Iran

    OpenAIRE

    Elham Elham Yoosefi Lafooraki; Fatemeh Rasekhi; Masoumeh Shayanmehr

    2014-01-01

    Odonata are an order belonging to Paleoptera which are divided into three suborders, Anisoptera, Anisozygoptera and Zygoptera. In order to investigate Odonata fauna from Mazandaran province, adult insects were collected from several different natural habitats and were identified. The specimens were included 13 species from 10 genera belonging to seven families. Seven species belonged to Anisoptera and six species belonged to Zygoptera. The species that were marked by asterisk were recorded fo...

  15. Morphological Characterisation of Some Important Indian Garcinia Species

    OpenAIRE

    Utpala Parthasarathy; Nandakishore, O. P.

    2014-01-01

    The genus Garcinia has over 200 species distributed in the tropics of the world. About 35 species occur in India, many of which are endemic and economically important with immense medicinal properties. However, lack of awareness, coupled with habitat destruction, leads to genetic erosion of this forest resource and many species are threatened. The Indian Institute of Spices Research (IISR), Calicut, has Garcinia genetic resources’ collection of 15 species of Western Ghats and Eastern Himalaya...

  16. Glacier Photograph Collection

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Glacier Photograph Collection is a database of photographs of glaciers from around the world, some dating back to the mid-1850's, that provide an historical...

  17. Walrus parts collection notes

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The attached field diary notes provide documentation of walrus parts collection activities which occurred in the Nome and surrounding area during the periods of May...

  18. Seed collection notes

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This document contains tables, lists, and notes related to tallgrass prairie seed collection on Neal Smith National Wildlife Refuge in 1992.

  19. NLM Digital Collections

    Data.gov (United States)

    U.S. Department of Health & Human Services — The National Library of Medicine's (NLM) Digital Collections offers a search-based Web service that provides access to the Dublin Core metadata and full-text OCR of...

  20. Turtle Photograph Collection

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Photos collected in marine turtle research programs are diverse, ranging from isolated observations of incidental encounters with turtles on the high-seas to...

  1. Introduction to collection development

    Directory of Open Access Journals (Sweden)

    Eva Kodrič-Dačič

    2007-01-01

    Full Text Available Due to constant evolution of the libraries’ cultural environment, the process of library collection development demands extensive knowledge of specific library and information skills, understanding of library’s mission, and instant reactions to the changes in book market and to demands of library users at the same time. The author systematically introduces terminology and basic skills, which are needed for effective and efficient library collection development: basic knowledge of book and information market , library collection processing and management. The article represents basic information on financing, acquisition and library procedures: selection of library materials, checking up the relevance of bibliographic data, allocation of library funds, coordinated acquisition, selection of suppliers, ordering, claiming, inflow control, distribution of library materials and inventory control, withdrawal of library materials and monitoring the comprehensiveness and relevance of library collections.

  2. Microalgal Culture Collection Transfers

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Milford Microalgal culture Collection holds over 200 live cultures representing 13 classes of of algae. The cultures are maintained in three different growing...

  3. NOS Hydrographic Surveys Collection

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  4. Freedom and the Collective

    Directory of Open Access Journals (Sweden)

    Straume, Ingerid S.

    2008-12-01

    Full Text Available Since Isaiah Berlin’s epitomizing Cold War-essay, "Two Concepts of Liberty, " thinkers who emphasize collective concepts of social life have carried the burden of proof against charges of totalitarian tendencies. The background is a ground figure in contemporary political thought that sets notions of collectivity against individual freedom, in a zero sum game: Either one is in favour of the individual, or one is in favour of the collective, and hence, so the bias has it, willing to sacrifice the rights and liberties of individuals. Since it is impossible to favour the latter position and remain liberal, in the wide sense of the term, this dichotomy serves to rob contemporary political thought of both its classical and revolutionary connotations, leaving only individual initiatives like lobbying and voting. Cornelius Castoriadis offers a way around this – arguably false – dichotomy, by regarding individual and collective freedom as two sides of the same coin.

  5. Long-term collections

    CERN Multimedia

    Collectes à long terme

    2007-01-01

    The Committee of the Long Term Collections (CLT) asks for your attention for the following message from a young Peruvian scientist, following the earthquake which devastated part of her country a month ago.

  6. Review: Ecological distribution of Dipterocarpaceae species in Indonesia

    Directory of Open Access Journals (Sweden)

    PURWANINGSIH

    2004-07-01

    Full Text Available Dipterocarpaceae is one of the biggest family with >500 species in the world, and most of dipterocarps population are grown in Indonesia which have high economical value of wood. One of the most important value from dipterocarps species is high on endemicities; there are up to 128 species (53.78% from 238 dipterocarps species in Indonesia. Distribution of dipterocarps species would be affected by some factors especially edaphic, climate, and altitude. In Indonesia the dipterocarps species distribution could be shown from islands groups, number of species and forest types. Based on the observation of herbarium collection in Herbarium Bogoriense the distribution of the most dipterocarps species was in the altitude of 0-500 m and 500-1000 m on the dipterocarps forest type. Kalimantan and Sumatra were the two bigger islands with have the dipterocarps species distributed relatively high on population and species.

  7. Sparse matrix test collections

    Energy Technology Data Exchange (ETDEWEB)

    Duff, I.

    1996-12-31

    This workshop will discuss plans for coordinating and developing sets of test matrices for the comparison and testing of sparse linear algebra software. We will talk of plans for the next release (Release 2) of the Harwell-Boeing Collection and recent work on improving the accessibility of this Collection and others through the World Wide Web. There will only be three talks of about 15 to 20 minutes followed by a discussion from the floor.

  8. The Arthur Hailey Collection

    OpenAIRE

    Lundstrom, Thomas E.

    2013-01-01

    The Arthur Hailey Collection consists of over 800 items from the estate of Arthur Hailey: personal copies of the author’s commercial publications as well as mementos from the study at his Lyford Cay home in The Bahamas. These materials, along with the manuscript collection donated to the Thomas Fisher Rare Book Library, University of Toronto, can provide scholars with resources to support research about this bestselling author.

  9. COLLECTIVE REPUTATION AND QUALITY

    OpenAIRE

    Winfree, Jason A.; McCluskey, Jill J.

    2003-01-01

    Firms who sell a regional or specialty product often share a common or collective reputation, which is based on the group's aggregate quality. The dynamic problem of collective reputation is similar to the natural resource extraction problems. Therefore, for the analysis of this particular problem, we use differential games. If there is unrestricted access to a common property resource (the reputation stock), agents perceive its shadow value to be zero and extract too rapidly; i.e, they all "...

  10. Collective excitations in nuclei

    Energy Technology Data Exchange (ETDEWEB)

    Chomaz, Ph. [Grand Accelerateur National d`Ions Lourds (GANIL), 14 - Caen (France); Collaboration: La Direction des Sciences de la Matiere du CEA (FR); Le Fonds National de la Recherche Scientifique de Belgique (BE)

    1998-12-31

    The properties of the nucleus cannot be reduced to the properties of its constituents: it is a complex system. The fact that many properties of the nucleus are consequences of the existence of mean-field potential is a manifestation of this complexity. In particular, the nucleons can thus self-organize in collective motions such as giant resonances. Therefore the study of this collective motions is a very good tool to understand the properties of the nucleus itself. The purpose of this article is to stress some aspects of these collective vibrations. We have studied how an ensemble of fermions as the nucleus can self-organize in collective vibrations which are behaving like a gas of bosons in weak interaction. Understanding of these phenomena remains one of the important subjects of actuality in the context of quantal systems in strong interaction. In particular, the study of the states with one or two vibration quanta provides a direct information on the structure of nuclei close to their ground states. Moreover, some collective states appear to be very robust against the onset of chaos. This is the case of the hot giant dipole built on top of a hot nucleus which seems to survive up to rather high temperatures. Their sudden disappearance is still a subject of controversy. It may be that the mean-field and the associated collective states are playing a crucial role also in catastrophic processes such as the phase-transitions. Indeed, when the system is diluted the collective vibrations may become unstable and it seems that these unstable modes provide a natural explanation to the self organization of the system in drops. Finally, considering the diversity of the different structures of exotic nuclei one may expect new vibration types. All these studies are showing the diversity of the collective motions of strongly correlated quantum systems such as the nucleus but many open questions remain to be solved. (authors) 304 refs., 53 figs., 5 tabs.

  11. Collective Identity and Conflict

    OpenAIRE

    Jensen, Nanna Gorm; Pinhasi, Tami; Christensen, Jonas Juhl; Vahl, Hans Peter; Johannsen, Christina; Christensen, Julie Hellesøe; Stockner, Selma Maria; Adler, Tara Maria Sellner

    2009-01-01

    This project, “Collective Identity and Conflict”, is a largely theoretical approach to gaining an understanding of how identity groups are shaped and reinforced, and why opposing groups get into seemingly unsolvable conflicts. We create a synthesis of theory on collective identity and social conflict mechanisms by drawing upon the fields of social psychology, sociology and cultural studies. Our ambition is to construct a comprehensive body of knowledge, which will be helpful when analyzing an...

  12. Rehabilitating the Stroke Collection

    Directory of Open Access Journals (Sweden)

    Mary Grimmond

    2006-06-01

    Full Text Available Objective The aim of this project was to complete an analysis of monograph and audiovisual items held in the Central Coast Health Service (CCHS Libraries and containing information relevant to the treatment of acute stroke. Acute stroke is treated by multidisciplinary teams of clinicians based at two hospitals within the CCHS. The adequacy of the library collection was measured by subject coverage and age. Methods The methodology used consisted of three main steps: a literature review; design, administration, and analysis of a questionnaire to members of the CCHS Acute Stroke Team; and an analysis of the libraries’ collections. The research project utilised project management methodology and an evidence based librarianship framework. Results The questionnaire revealed that electronic resources were by far the most frequently used by participants, followed in order by print journals, books, interlibrary loan articles, and audiovisual items. Collection analysis demonstrated that the monograph and audiovisual collections were adequate in both scope and currency to support the information needs of Acute Stroke Team members, with the exception of resources to support patient education. Conclusion The researchers developed recommendations for future collection development in the area of acute stroke resources. Conducting this project within the evidence based librarianship framework helped to develop library staff members’ confidence in their ability to make future collection development decisions, informed by the target group’s information needs and preferences. The collection analysis methodology was designed to be replicated, and new specialist groups within the client base of the library will be targeted to repeat the collection analysis process.

  13. Endangered Species Act

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The purpose of the Endangered Species Act (ESA) is to protect and recover imperiled species and the ecosystems upon which they depend. The U.S. Fish and Wildlife...

  14. Viabilidade, confirmação taxonômica e detecção enzimática de espécies de Acremonium preservadas sob óleo mineral na Coleção de Culturas University Recife Mycology Viability, taxonomic confirmation and enzymatic detection of Acremonium species preserved under mineral oil in the URM Culture Collection

    Directory of Open Access Journals (Sweden)

    Suellen Carvalho de Moura Braz

    2009-02-01

    Full Text Available Enzimas hidrolíticas secretadas por fungos têm um papel importante na patogenicidade das infecções. Objetivando avaliar a atividade enzimática foram testados 31 isolados de Acremonium mantidos na Coleção de Culturas University Recife Mycology. Fragmentos das culturas foram transferidos para caldo glicosado para reativação e posterior crescimento em meio ágar batata dextrose, para verificar viabilidade, pureza e confirmação taxonômica pela observação das características macroscópicas e microscópicas. Para detecção enzimática foram utilizados substratos de caseína do leite e gelatina para protease, amido para amilase e lecitina de soja para fosfolipase. Das 31 culturas, 26 (83,9% mantiveram-se viáveis e 24 (92,3% foram confirmadas taxonomicamente. Das 24 culturas, 12 (50% apresentaram atividade proteásica, duas (16,7% em caseína do leite, uma (8,3% em gelatina e nove (75% em ambos os substratos; 16 (66,7% degradaram amido. Nenhuma cultura apresentou atividade fosfolipásica. Conclui-se que espécies de Acremonium são capazes de produzir enzimas envolvidas na patogenicidade das infecções fúngicas.Hydrolytic enzymes secreted by fungi play an important role in the pathogenesis of infection. With the aim of evaluating the enzymatic activity, 31 isolates of Acremonium stored in the University of Recife Mycology (URM Culture Collection were tested. Culture fragments were transferred to glycoside broth for reactivation and further growth in potato dextrose agar medium in order to investigate viability and purity and to confirm the taxonomy through observing the macroscopic and microscopic characteristics. To detect enzymes, milk casein and gelatin were used as substrates for proteinase, starch for amylase and soy lecithin for phospholipase. Among the 31 cultures, 26 (83.9% remained viable and 24 (92.3% were confirmed taxonomically. Out of these 24 cultures, 12 (50% presented proteinase activity, of which two (16.7% were on

  15. A Theory of Flagship Species Action

    Directory of Open Access Journals (Sweden)

    Paul Jepson

    2015-01-01

    Full Text Available The flagship species approach is an enduring strategy in conservation. Academic discussion on flagship species has focussed on two dimensions: on what basis should they be selected and how have they been put to use. Here we consider a third dimension, namely the manner in which flagship species act and have the capacity to galvanise and influence conservation outcomes. Drawing on concepts from the social sciences, viz. affordance, framing, and actor-networks; we discuss examples of flagship species to propose a theory of flagship species action. In brief, our theory posits that a flagship species is one with traits that afford the assembly of relatively coherent networks of associations with ideational elements located in pre-existing cultural framings. These associations give rise to opportunities to align with deep cultural frames, contemporary cultural phenomena and political economy such that when a conservation action is introduced, forms of agency cause the species and human publics to change. The species becomes re-framed (or reinvigorated as a cultural asset speaking for a wider nature, publics and political agendas. Further our theory posits that species with traits that enrol in idea networks incorporating human fears, will have limited flagship capacity. This is because the ability of the representations produced to align with frames incorporating collective aspirations is constrained. In terms of applied conservation practice, our theory suggests that: a key criteria for selecting potential flagship species is presence in existing cultural frames, that effective deployment of flagship species requires an understanding of the species′ cultural associations, and a species ability to galvanise action may be limited to certain times and places. Furthermore, once deployed conservation interests will never have full control over the flagship species: it may act in uncertain and unexpected ways.

  16. Quantifying the taxonomic diversity in real species communities

    CERN Document Server

    Cartozo, C Caretta; Ricotta, C; Barthelemy, M; Caldarelli, G

    2008-01-01

    We analyze several florae (collections of plant species populating specific areas) in different geographic and climatic regions. For every list of species we produce a taxonomic classification tree and we consider its statistical properties. We find that regardless of the geographical location, the climate and the environment all species collections have universal statistical properties that we show to be also robust in time. We then compare observed data sets with simulated communities obtained by randomly sampling a large pool of species from all over the world. We find differences in the behavior of the statistical properties of the corresponding taxonomic trees. Our results suggest that it is possible to distinguish quantitatively real species assemblages from random collections and thus demonstrate the existence of correlations between species.

  17. Conservation status of Chinese species: (2) Invertebrates.

    Science.gov (United States)

    Xie, Yan; Wang, Sung

    2007-06-01

    A total of 2441 invertebrate species were evaluated using the IUCN Red List Criteria and Regional Guidelines. Approximately 30 experts were involved in this project, which covered a wide range of species, including jellyfish, corals, planarians, snails, mollusks, bivalves, decapods, benthic crustaceans, arachnids (spiders, scorpions), butterflies, moths, beetles, sea cucumbers, sea urchins, sea stars, acorn worms and lancelets. In general, invertebrate species in China were found to be severely threatened, with 0.9% being critically endangered, 13.44% endangered and 20.63% vulnerable. All species of hermatypic corals and planarians are threatened. More than 80% of evaluated species face serious threat due to habitat destruction by coral collection, logging, non-woody vegetation collection, timber plantations, non-timber plantations, extraction and/or livestock. Other threats are intrinsic factors, harvesting by humans, alien invasive species and pollution. The main intrinsic factors contributing to the high levels of threat are limited dispersal and restricted range. No conservation measures have been taken for 70% of the threatened invertebrates evaluated. Existing conservation measures include: strengthening of national and international legislation (Convention on International Trade in Endangered Species of Wild Fauna and Flora), increasing public awareness, studying population trends/monitoring, and establishment of protected areas. The major conservation measure employed is strengthening of policies. Relative to the situation worldwide (2006 IUCN Red List), there is little information available about invertebrate extinctions in China. PMID:21396022

  18. Mosquito species geographical distribution in Iraq 2009

    Directory of Open Access Journals (Sweden)

    Haidar A. Hantosh, Hameeda M. Hassan, Bushra Ahma & Ali Al-fatlawy

    2012-03-01

    Full Text Available Background & objectives: Mosquitoes transmit diseases to >700 million people annually. Malaria kills threemillion persons every year, including one child every 30 sec. Worldwide there are >3000 mosquito species.In Iraq, 37 species have been identified in different surveys over several decades. We conducted an entomologicalsurvey to determine the mosquito species and their distribution in Iraq in 2009.Methods: Between January 20 and December 31, 2009, mosquitoes in houses in 12 Iraqi provinces werecollected and speciated. Five to 10 villages were selected randomly in each province and in each village 10houses were selected randomly to collect mosquitoes and the density of mosquitoes per room was calculated.Kits for entomological investigation were used and the collected mosquitoes were sent to the vector bornedisease section laboratory for classification using the Naval Medical Research Unit 3 standard classificationkey.Results: A total of 29,156 mosquitoes were collected, representing two genera: Anopheles (n=13,268, or 46%of the total collected and Culex (n=15,888, or 54% of the total collected. Four Anopheles (An. pulcherrimus,An. stephensi, An. superpictus, and An. sacharovi and one Culex (Cx. pipiens species were identified. Anophelespulcherrimus was found in 11 provinces, An. stephensi in 7, An. superpictus in 2 and An. sacharovi in oneprovince, while Cx. pipiens was found in all the 12 provinces. Two peaks of mosquito density were found: thefirst from April–June and the other from September–October.Interpretation & conclusion: There are clear differences in Anopheles mosquito species geographical distributionand density among Iraqi provinces, while Cx. pipiens mosquitoes are distributed all over Iraq. All mosquitogenera show clear seasonal density variation. The study highlights that the manual mosquito classification isnot enough to identify all the species of mosquitoes in Iraq

  19. Microalgae Culture Collection, 1985-1986

    Energy Technology Data Exchange (ETDEWEB)

    1986-01-01

    The SERI Microalgae Culture Collection was established in support of the US Department of Energy's Biofuels Program to provide a repository for strains identified or developed for mass culture biomass production and to make these strains readily available to the research community. The strains in the collection have been selected for their potential in biomass fuel applications, and many produce significant quantities of cellular storage lipids. The Culture Collection Catalog lists 20 strains of ten species. Many have been tested in outdoor mass culture systems, and several have demonstrated excellent performance as biomass producers, with yields of up to 40 grams of organic matter per square meter per day. The majority of strains added to the collection this year have been isolated from inland saline waters, although marine species are included as well. We believe that the strains in this collection can provide a source of extremely useful organisms, both for laboratory experimentation and for mass culture research. 98 refs., 31 figs., 52 tabs.

  20. Aquatic invasive species

    Science.gov (United States)

    Thorsteinson, Lyman

    2005-01-01

    Invasive species are plants or animals that are present in an ecosystem beyond their native range. They may have few natural controls in their new environment and proliferate. They can threaten native species and interfere with human activities. The Western Fisheries Research Center (WFRC) has been conducting research to understand how non-native species invade and affect ecosystems, thus aiding management efforts.

  1. The Earth's Vanishing Species.

    Science.gov (United States)

    USA Today, 1981

    1981-01-01

    Elaborates on the problem of expanding human activity to the world's plant and animal species. Concludes that preserving an individual species is largely a waste of time and effort and that the best way to protect the most species of plants and animals is to save their environments over large tracts of land. (DB)

  2. Species diversity modulates predation

    NARCIS (Netherlands)

    Kratina, P.; Vos, M.; Anholt, B.R.

    2007-01-01

    Predation occurs in a context defined by both prey and non-prey species. At present it is largely unknown how species diversity in general, and species that are not included in a predator's diet in particular, modify predator–prey interactions.Therefore we studied how both the density and diversity

  3. Species choice, provenance and species trials among native Brazilian species

    Energy Technology Data Exchange (ETDEWEB)

    Drumond, M.A.

    1982-01-01

    Six papers from the conference are presented. Drumond, M.A., Potential of species native to the semi-arid tropics, 766-781, (Refs. 18), reports on Anadenanthera macrocarpa, Mimosa species, Schinopsis brasiliensis, Spondias tuberosa, Ziziphus joazeiro, Cnidoscolus phyllacanthus, Bursera leptophleos (leptophloeos), Tabebuia impetiginosa, Astronium urundeuva, and Mimosa caesalpinia. Monteiro, R.F.R., Speltz, R.M., Gurgel, J.T. do A.; Silvicultural performance of 24 provenances of Araucaria angustifolia in Parana, 814-824, (Refs. 8). Pires, C.L. da S., Kalil Filho, A.N., Rosa, P.R.F. da, Parente, P.R., Zanatto, A.C.S.; Provenance trials of Cordia alliodora in the State of Sao Paulo, 988-995, (Refs. 9). Nogueira, J.C.B., Siqueira, A.C.M.F., Garrido, M.A.O., Gurgel Garrido, L.M. do A., Rosa, P.R.F., Moraes, J.L. de, Zandarin, M.A., Gurgel Filho, O.A., Trials of some native species in various regions of the State of Sao Paulo, 1051-1063, (Refs. 9) describes Centrolobium tomentosum, Peltophorum dubium, Tabebuia vellosoi, Cariniana legalis, and Balfourodendron riedelianum. Batista, M.P., Borges, J.F., Franco, M.A.B.; Early growth of a native species in comparison with exotics in northeastern Para, Brazil, 1105-1110, (Refs. 3). Jacaranda copaia is compared with Gmelina arborea, Pinus caribaea various hondurensis, Eucalyptus deglupta, and E. urophylla. Lima, P.C.F., Souza, S.M. de, Drumond, M.A.; Trials of native forest species at Petrolina, Pernambuco, 1139-1148, (Refs. 8), deals with Anadenanthera macrocarpa, Piptadenia obliqua, Pithecellobium foliolosum, Astronium urundeuva, Schinopsis brasiliensis, Cassia excelsa, Caesalpinia pyramidalis, Parkia platycephala, Pseudobombax simplicifolium, Tabebuia impetiginosa, Caesalpinia ferrea, and Aspidosperma pyrifolium. 18 references.

  4. Theory of Collective Intelligence

    Science.gov (United States)

    Wolpert, David H.

    2003-01-01

    In this chapter an analysis of the behavior of an arbitrary (perhaps massive) collective of computational processes in terms of an associated "world" utility function is presented We concentrate on the situation where each process in the collective can be viewed as though it were striving to maximize its own private utility function. For such situations the central design issue is how to initialize/update the collective's structure, and in particular the private utility functions, so as to induce the overall collective to behave in a way that has large values of the world utility. Traditional "team game" approaches to this problem simply set each private utility function equal to the world utility function. The "Collective Intelligence" (COIN) framework is a semi-formal set of heuristics that recently have been used to construct private utility. functions that in many experiments have resulted in world utility values up to orders of magnitude superior to that ensuing from use of the team game utility. In this paper we introduce a formal mathematics for analyzing and designing collectives. We also use this mathematics to suggest new private utilities that should outperform the COIN heuristics in certain kinds of domains. In accompanying work we use that mathematics to explain previous experimental results concerning the superiority of COIN heuristics. In that accompanying work we also use the mathematics to make numerical predictions, some of which we then test. In this way these two papers establish the study of collectives as a proper science, involving theory, explanation of old experiments, prediction concerning new experiments, and engineering insights.

  5. Brachyuran Crabs collected at Curaçao

    NARCIS (Netherlands)

    Rathbun, Mary J.

    1924-01-01

    In 1920 a report ¹) on Dr. BOEKE’S collection of crabs and shrimps from Curaçao and other Dutch West Indian Islands was published. Dr. VAN DER HORST’S collection forms an important addition to the fauna of Curaçao, especially as to the Xanthids and Majids, or spider crabs. Four new species were disc

  6. INVENTORY OF THE INVASIVE ALIE N PLANT SPECIES IN INDONESIA

    Directory of Open Access Journals (Sweden)

    SRI S UDARMIYATI T JITROSOEDIRDJO

    2005-01-01

    Full Text Available An inventory of the alien plant species in Indone sia based on the existing references and herbarium specimens concluded that 1936 alien plant species ar e found in Indonesia which belong to 187 families. Field studies should be done to get the complete figur es of alien plant species in Indonesia. Based on the existing figures of the plant species, the invasive alien plant species can be iden tified, followed by studies on the assessment of losses, biology, management and their possible utilizations. Alien plant species are imported to Indonesia for cultivation, collection of the botanical garden, as experimental plants or other curiosities. Aside from plants purposely imported, there are also introduced plant propagules conta-minating imported agricultural products. These alien plant species can be beneficial or have a potential of being invasive. The alien cultivated species consisted of 67% of the total number. More than half of the cultivated plants are ornamental plants. Some of th e species are naturalized or escaped from cultivation and become wild and invasive. Some other natura lized species, adapted well without any problems of invasion. There are 339 species or 17% of the species r ecorded as weeds. The highest record of weeds is found in the family of Poaceae (57 species, follo wed by Asteraceae (53 species and Cyperaceae (35 species. There are 6 families having more than 10 species of weeds: Amaranthaceae, Asteraceae, Cyperaceae, Euphorbiaceae, Poaceae, and Rubiaceae. Three families have more than 100 species: Asteraceae 162 species, Poaceae 120 species, and Papillionaceae 103 species. Five species of aquatic and 20 species of terrestrial plants considered as important alien plant species in Indonesia were identified and some of their distributions noted

  7. Flexible human collective wisdom.

    Science.gov (United States)

    Juni, Mordechai Z; Eckstein, Miguel P

    2015-12-01

    Group decisions typically outperform individual decisions. But how do groups combine their individual decisions to reach their collective decisions? Previous studies conceptualize collective decision making using static combination rules, be it a majority-voting rule or a weighted-averaging rule. Unknown is whether groups adapt their combination rules to changing information environments. We implemented a novel paradigm for which information obeyed a mixture of distributions, such that the optimal Bayesian rule is nonlinear and often follows minority opinions, while the majority rule leads to suboptimal but above chance performance. Using perceptual (Experiment 1) and cognitive (Experiment 2) signal-detection tasks, we switched the information environment halfway through the experiments to a mixture of distributions without informing participants. Groups gradually abandoned the majority rule to follow any minority opinion advocating signal presence with high confidence. Furthermore, groups with greater ability to abandon the majority rule achieved higher collective-decision accuracies. It is important to note that this abandonment was not triggered by performance loss for the majority rule relative to the first half of the experiment. Our results propose a new theory of human collective decision making: Humans make inferences about how information is distributed across individuals and time, and dynamically alter their joint decision algorithms to enhance the benefits of collective wisdom.

  8. Life Cycle Collection Management

    Directory of Open Access Journals (Sweden)

    Helen Shenton

    2003-09-01

    Full Text Available Life cycle collection management is a way of taking a long-term approach to the responsible stewardship of the British Library's collections and is one of the Library's strategic strands. It defines the different stages in a collection item's existence over time. These stages range from selection and acquisitions processing, cataloguing and press marking, through to preventive conservation, storage and retrieval. Life cycle collection management seeks to identify the costs of each stage in order to show the economic interdependencies between the phases over time. It thereby aims to demonstrate the long-term consequences of what the library takes into its collections, by making explicit the financial and other implications of decisions made at the beginning of the life cycle for the next 100 plus years. This paper describes the work over the past year at the British Library on this complex and complicated subject. It presents the emerging findings and suggests how it can be used for practical reasons (by individual curators and selectors and for economic, governance and political purposes. The paper describes the next steps in the project, for example, on a predictive data model. The British Library is seeking to benchmark itself against comparable organisations in this area. It intends to work with others on specific comparison for example, of life cycle costing of electronic and paper journals, as a prelude to eliding digital and 'traditional' formats.

  9. Bird Populations in Fernbank Forest: MIGRANT SPECIES.

    Science.gov (United States)

    Schmalz, Georgann

    1991-01-01

    This article discusses fragmented forests in general and provides arrival/departure data about migratory birds collected at Fernbank Forest which is located within metropolitan Atlanta. The data indicate that population trends for selected species have not changed over 19 years of migration recordings within this small, but important, fragmented…

  10. Fostering collective intelligence education

    Directory of Open Access Journals (Sweden)

    Jaime Meza

    2016-06-01

    Full Text Available New educational models are necessary to update learning environments to the digitally shared communication and information. Collective intelligence is an emerging field that already has a significant impact in many areas and will have great implications in education, not only from the side of new methodologies but also as a challenge for education. This paper proposes an approach to a collective intelligence model of teaching using Internet to combine two strategies: idea management and real time assessment in the class. A digital tool named Fabricius has been created supporting these two elements to foster the collaboration and engagement of students in the learning process. As a result of the research we propose a list of KPI trying to measure individual and collective performance. We are conscious that this is just a first approach to define which aspects of a class following a course can be qualified and quantified.

  11. Collective supernova neutrino oscillations

    Energy Technology Data Exchange (ETDEWEB)

    Mirizzi, Alessandro [Max Planck Institute for Physics, Munich (Germany)

    2009-07-01

    Neutrinos emitted by core-collapse supernovae (SNe) represent an important laboratory for both particle physics and astrophysics. While propagating in the dense SN environment, they can feel not only the presence of background matter (via ordinary Mikheev-Smirnov-Wolfenstein effects) but also of the gas of neutrinos and antineutrinos (via neutrino-neutrino interaction effects). The neutrino-neutrino interactions appear to modify the flavor evolution of SN neutrinos in a collective way, completely different from the ordinary matter effects. In these conditions, the flavor evolution equations become highly nonlinear, sometimes resulting in surprising phenomena when the entire neutrino system oscillates coherently as a single collective mode. In this talk, I present the recent results on collective supernova neutrino flavor conversions and I discuss about the sensitivity of these effects to the ordering of the neutrino mass spectrum.

  12. Collection for Ecuador

    CERN Multimedia

    Staff Association

    2016-01-01

    After the violent earthquake that caused the death of hundreds of people, and left thousands wounded and homeless in Ecuador, we appeal to your generosity. We are starting a collection today to help the victims, and the funds will be donated to the INEPE Institute in Quito. This organization, known at CERN for many years as it has been supported by the Long Term Collections of the Staff Association, will be responsible for sending the proceeds of the collection directly to the victims in the field. On behalf of the CERN Management and the CERN Staff Association Fabiola Gianotti, Director General, and Alessandro Raimondo, President of the Staff Association =========================== Bank account details for donations: Bank account holder: Staff Association CERN - 1211 GENEVA 23 Account number: 279-HU106832.1 IBAN: CH85 0027 9279 HU10 6832 1 BIC: UBSWCHZH80A Please mention: Ecuador

  13. Wildlife specimen collection, preservation, and shipment

    Science.gov (United States)

    White, C. LeAnn; Dusek, Robert J.; Franson, J. Christian; Friend, Milton; Gibbs, Samantha E.J.; Wild, Margaret A.

    2015-01-01

    Specimens are used to provide supporting information leading to the determination of the cause of disease or death in wildlife and for disease monitoring or surveillance. Commonly used specimens for wildlife disease investigations include intact carcasses, tissues from carcasses, euthanized or moribund animals, parasites, ingested food, feces, or environmental samples. Samples from live animals or the environment (e.g., contaminated feed) in the same vicinity as a mortality event also may be helpful. The type of specimen collected is determined by availability of samples and biological objectives. Multiple fresh, intact carcasses from affected species are the most useful in establishing a cause for a mortality event. Submission of entire carcasses allows observation of gross lesions and abnormalities, as well as disease testing of multiple tissues. Samples from live animals may be more appropriate when sick animals cannot be euthanized (e.g., threatened or endangered species) or for research and monitoring projects examining disease or agents circulating in apparently healthy animals or those not exhibiting clinical signs. Samples from live animals may include collections of blood, hair, feathers, feces, or ectoparasites, or samples obtained by swabbing lesions or orifices. Photographs and videos are useful additions for recording field and clinical signs and conveying conditions at the site. Collection of environmental samples (e.g., feces, water, feed, or soil) may be appropriate when animals cannot be captured for sampling or the disease agent may persist in the environment. If lethal collection is considered necessary, biologists should refer to the policies, procedures, and permit requirements of their institution/facility and the agency responsible for species management (U.S. Fish and Wildlife Service or State natural resource agency) prior to use in the field. If threatened or endangered species are found dead, or there is evidence of illegal take, field

  14. Collective academic supervision

    DEFF Research Database (Denmark)

    Nordentoft, Helle Merete; Thomsen, Rie; Wichmann-Hansen, Gitte

    2013-01-01

    are interconnected. Collective Academic Supervision provides possibilities for systematic interaction between individual master students in their writing process. In this process they learn core academic competencies, such as the ability to assess theoretical and practical problems in their practice and present them...... process. This article fills these gaps by discussing potentials and challenges in “Collective Academic Supervision”, a model for supervision at the Master of Education in Guidance at Aarhus University in Denmark. The pedagogical rationale behind the model is that students’ participation and learning...

  15. Collective nuclear dynamics. Proceedings

    International Nuclear Information System (INIS)

    The Fourth International school on nuclear physics was help on 29 Aug - 7 Sep, 1994 in Ukraine. The specialists discussed following subjects:liquid drop and the shell correction method; nuclear deformation energy and fission; nuclear structure at high spins, superdeformed states, structure of excited and exotic nuclei; nuclear fluid dynamics and large scale collective motion; order and chaos as they relate to the collective motion; quantum and interference phenomena in nuclear collisions; quasi-fission and multinucleon fragmentation effects; shell effects in non-nuclear systems; new nuclear facilities

  16. Collection for Nepal

    CERN Multimedia

    Staff Association

    2015-01-01

    Following the violent earthquake in Nepal and neighbouring countries, a collection of money to help the victims was organized at CERN. A sum of 34 800 CHF was collected, and transferred to the NGO Live to Love. On July 22, the NGO sent a letter to CERN thanking for the support (see below). You can also find more information concerning this NGO and how they use their funds on our website: http://staff-association.web.cern.ch/sites/staff-association.web.cern.ch/files/Docs/Live_to_Love.pdf

  17. Impedance and Collective Effects

    CERN Document Server

    Metral, E; Rumolo, R; Herr, W

    2013-01-01

    This document is part of Subvolume C 'Accelerators and Colliders' of Volume 21 'Elementary Particles' of Landolt-Börnstein - Group I 'Elementary Particles, Nuclei and Atoms'. It contains the Chapter '4 Impedance and Collective Effects' with the content: 4 Impedance and Collective Effects Introduction 4.1 Space Charge 4.2 Wake Fields and Impedances 4.3 Coherent Instabilities 4.4 Landau Damping 4.5 Two-Stream Effects (Electron Cloud and Ions) 4.6 Beam-Beam Effects 4.7 Numerical Modelling

  18. Collective Action under Globalization

    DEFF Research Database (Denmark)

    Scheuer, Steen

    organizations deliberating collective action. Institutional factors are especially important for understanding still persisting inter-country variance, and they point to a novel industrial conflict calculus for employees. This calculus seems to entail a more restricted use, but not the withering away of the......Collective action in the form of industrial conflict has declined dramatically since the high tide in the 1970s in Europe. This article argues that this decline is the result of significant changes in both economic and institutional factors, influencing the calculations of employees and of their...

  19. ODONATA FROM BULGARIA IN THE COLLECTION OF NATIONAL MUSEUM OF BOSNIA AND HERZEGOVINA

    OpenAIRE

    Kulijer, Dejan; Marinov, Milen

    2010-01-01

    The entomological collection of the National Museum of Bosnia and Herzegovina is one of the oldest Balkan insect collections. Eighty-seven (87) dragonfly specimens from 19 species that originate from Bulgaria were found in this collection. In this paper we present the oldest and till now unknown records of dragonflies from Bulgaria from this collection. Some interesting and new distribution data on several species are also presented and discussed.

  20. Sample collection and documentation

    International Nuclear Information System (INIS)

    Beginning within a few weeks after the bombings and periodically during the intervening decades, investigators in Hiroshima and Nagasaki have collected samples of materials that were in the cities at the time of the bombings. Although some early efforts were not driven by specific measurement objectives, many others were. Even some of the very earliest samples collected in 1945 were based on carefully conceived research plans and detailed specifications for samples appropriate to particular retrospective measurements, i.e., of particular residual quantities remaining from exposure to the neutrons and gamma rays from the bombs. This chapter focuses mainly on the work of groups at two institutions that have actively collaborated since the 1980s in major collection efforts and have shared samples among themselves and with other investigators: the Radiation Effects Research Foundation (RERF) and its predecessor the Atomic Bomb Casualty Commission (ABCC), and Hiroshima University. In addition, a number of others are listed, who also contributed to the literature by their collection of samples. (J.P.N.)

  1. A DIY Collection

    Science.gov (United States)

    Freedman, Jenna

    2006-01-01

    Chris Dodge, a renowned alternative pressologist and the librarian at "Utne" magazine, has been known to say, "Every library should be a special library." In order to meet this challenge, the librarians at Barnard College decided to start a collection of underground publications known as zines. In this article, the author describes how librarians…

  2. Quick Fixes: Collection Development

    Science.gov (United States)

    Nabb, Alicia

    2010-01-01

    The Do It Yourself (DIY) section is an essential and well-used part of the public library's collection and must be kept up-to-date to remain valuable, since tools, materials, and building codes are always changing. Current economic decline has increased the topic's popularity as homeowners choose to remodel rather than buy, or attempt to make…

  3. Collective Negotiations in Education.

    Science.gov (United States)

    Piele, Philip

    1968-01-01

    This literature review examines current documents on collective negotiations in education that were processed by the Clearinghouse on Educational Administration. Principal topics discussed are negotiating procedures, the role of the superintendent, teacher organization-school administrator relations, causes of teacher militancy, negotiation laws,…

  4. Fully electric waste collection

    CERN Multimedia

    Anaïs Schaeffer

    2015-01-01

    Since 15 June, Transvoirie, which provides waste collection services throughout French-speaking Switzerland, has been using a fully electric lorry for its collections on the CERN site – a first for the region!   Featuring a motor powered by electric batteries that charge up when the brakes are used, the new lorry that roams the CERN site is as green as can be. And it’s not only the motor that’s electric: its waste compactor and lifting mechanism are also electrically powered*, making it the first 100% electric waste collection vehicle in French-speaking Switzerland. Considering that a total of 15.5 tonnes of household waste and paper/cardboard are collected each week from the Meyrin and Prévessin sites, the benefits for the environment are clear. This improvement comes as part of CERN’s contract with Transvoirie, which stipulates that the firm must propose ways of becoming more environmentally friendly (at no extra cost to CERN). *The was...

  5. Collective excitations in nuclei

    Energy Technology Data Exchange (ETDEWEB)

    Chomaz, Ph

    1997-12-31

    The properties of the nucleus cannot be reduced to the properties of its constituents: it is a complex system. The fact that many properties of the nucleus are consequences of the existence of mean-field potential is a manifestation of this complexity. In particular the nucleons can thus self-organize in collective motions such as giant resonances. Therefore the study of these collective motions is a very good to understand the properties of the nucleus itself. The purpose of this article was to stress some aspects of these collective vibrations. In particular we have studied how an ensemble of fermions as the nucleus can self-organize in collective vibrations which are behaving like a gas of bosons in weak interaction. The understanding of these phenomena remains one of the important subjects of actually in the context of quantal systems in strong interaction. In particular the study of the states with one or two vibration quanta provides a direct information on the structure if nuclei close to their ground states. (author) 270 refs.

  6. Collective variables and dissipation

    International Nuclear Information System (INIS)

    This course is an introduction to some basic concepts of non-equilibrium statistical mechanics. We put stress on the relevant entropy associated to a set of collective variables, on the meaning of the projection method in Liouville space and its use to establish equations of motion for these variables, and on the interpretation of dissipation in the framework of information theory

  7. Innovation and collective entrepreneurship

    DEFF Research Database (Denmark)

    Spear, Roger

    2012-01-01

    different perspectives on innovation and social innovation and the dynamic interaction through collective entrepreneurship in the the social and solidarity economy; bringing out process and outcome dimensions of innovation. And it will develop an understanding of the drivers and barriers to innovation...

  8. Materials and Collections

    Science.gov (United States)

    Hinseth, Lois

    1978-01-01

    This discussion of collection development considers (1) special problems as they relate to specific types of institutions--nursing, long term residential, psychiatric and developmental; (2) acquisition; (3) organization--classification, cataloging, and physical arrangement; (4) use--circulation, special methods, and the role of librarians; and (5)…

  9. Octupole collectivity in nuclei

    Science.gov (United States)

    Butler, P. A.

    2016-07-01

    The experimental and theoretical evidence for octupole collectivity in nuclei is reviewed. Recent theoretical advances, covering a wide spectrum from mean-field theory to algebraic and cluster approaches, are discussed. The status of experimental data on the behaviour of energy levels and electric dipole and electric octupole transition moments is reviewed. Finally, an outlook is given on future prospects for this field.

  10. Collective Action under Globalization

    DEFF Research Database (Denmark)

    Scheuer, Steen

    Collective action in the form of industrial conflict has declined dramatically since the high tide in the 1970s in Europe. This article argues that this decline is the result of significant changes in both economic and institutional factors, influencing the calculations of employees and of their ...

  11. Collection for SOS animaux

    CERN Multimedia

    2005-01-01

    The Pays de Gex animal shelter is collecting funds. There will be things to buy. You will be able to make a donation and/or become a member of the association or simply get information. SOS Animaux stall (Hall, Build. 60, next to restaurant 1) On Wednesday 23 November 2005 (from 9h - 17h non-stop)

  12. The nuclear collective motion

    International Nuclear Information System (INIS)

    Current developments in nuclear structure are discussed from a theoretical perspective. First, the progress in theoretical modeling of nuclei is reviewed. This is followed by the discussion of nuclear time scales, nuclear collective modes, and nuclear deformations. Some perspectives on nuclear structure research far from stability are given. Finally, interdisciplinary aspects of the nuclear many-body problem are outlined. (orig.)

  13. Collective Rights Management Directive

    NARCIS (Netherlands)

    L. Guibault

    2014-01-01

    Collective management organisations play an essential role in enabling the mass dissemination of content that is protected by copyright and related rights within Europe and beyond, especially when such dissemination takes place over the internet. Whether it is through commercial content delivery ser

  14. Developing the Collection Graph

    NARCIS (Netherlands)

    Blanke, Tobias; Bryant, Michael; Speck, Reto

    2015-01-01

    Library Hi Tech, Volume 33, Issue 4, November 2015. Purpose In 2010 the European Holocaust Research Infrastructure (EHRI) was funded to support research into the Holocaust. The project follows on from significant efforts in the past to develop and record the collections of the Holocaust in several n

  15. Collection for Italy

    CERN Multimedia

    Fabiola Gianotti, Director-General, and Ghislain Roy, President of the Staff Association

    2016-01-01

    Following the earthquake of 24 August in central Italy, many of you have expressed your solidarity. The collection to support the victims raised a total of 10 000 CHF, which was transferred in its entirety to Italy’s civil protection through the Italian delegation to the CERN Council. The CERN Directorate and the CERN Staff Association sincerely thank you for your generosity.

  16. Long-Term Collections

    CERN Multimedia

    Comité des collectes à long terme

    2011-01-01

    It is the time of the year when our fireman colleagues go around the laboratory for their traditional calendars sale. A part of the money of the sales will be donated in favour of the long-term collections. We hope that you will welcome them warmly.

  17. Collections Define Cataloging's Future

    Science.gov (United States)

    Simpson, Betsy

    2007-01-01

    The role of catalogers within academic libraries is evolving to meet new demands and cultivating a broader understanding of cataloging--one that focuses on collections, not the catalog, and applies cataloger expertise across metadata activities. Working collaboratively as never before, catalogers are reinventing their place within the library.

  18. Overview of the leiognathid species in Malaysia

    Directory of Open Access Journals (Sweden)

    Ying G. Seah

    2011-10-01

    Full Text Available The taxonomy of leiognathid species has changed drastically as a result of revisions carriedout in recent years. During the same period, new species have also been described. In this study, ataxonomic review and update of leiognathid species present in Malaysian waters was carried out.Leiognathid specimens were collected from the coastal waters of Peninsular Malaysia. All specimens wereexamined for their internal and external morphological features and osteological features. Theleiognathids of Malaysia reviewed here comprised at least 22 species. Malaysia thus has one of therichest assemblages of leiognathid species in the world. Equulites laterofenestra (Sparks & Chakrabarty,2007, Leiognathus robustus Sparks & Dunlap, 2004, and Nuchequula mannusella Chakrabarty & Sparks,2007 are new records in Malaysian waters. Some previously described species from Malaysia wereerroneously identified. These include specimens misidentified as Equulites rivulatus (Temminck &Schlegel, 1845, Gazza achlamys Jordan & Starck, 1917, and Nuchequula nuchalis (Temminck &Schlegel, 1845. E. rivulatus and G. achlamys have been recorded in the Western Pacific but thesespecies have not been encountered in Malaysia or in collections held in Malaysia.

  19. AFSC/ABL: Juvenile rockfish DNA species identification

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Many pelagic juvenile rockfish (Sebastes) were collected in juvenile salmonid surveys in the Gulf of Alaska (GOA) from 1998 to 2002. Often species identification of...

  20. Species Observations (poly) - San Diego County [ds648

    Data.gov (United States)

    California Department of Resources — Created in 2009, the SanBIOS database serves as a single repository of species observations collected by various departments within the County of San Diego's Land...

  1. BIOMASS, Displacement Volume, WATER DEPTH, SPECIES IDENTIFICATION and other tows - plankton tows data collected in the Coastal Waters of SE Alaska, Gulf of Alaska and North Pacific Ocean on NOAA Ship JOHN N. COBB cruises SECM, jc0005 and others as part of the NEP project from 1997-05-24 to 2006-08-20 (NODC Accession 0115197)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115197 includes discrete sample, meteorological, tows - plankton tows and biological data collected aboard NOAA Ship JOHN N. COBB during cruises...

  2. SPECIES IDENTIFICATION - LIFE STAGE and TAXONOMIC CODE pump cast data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9505, AL9506 and others as part of the GB project from 1995-01-12 to 1999-06-23 (NODC Accession 0107285)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0107285 includes pump cast and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9505, AL9506, AL9508,...

  3. SPECIES IDENTIFICATION - LIFE STAGE and TAXONOMIC CODE tows - plankton tows data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9506, AL9605 and others as part of the GB project from 1995-02-12 to 1999-05-21 (NODC Accession 0107469)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0107469 includes tows - plankton tows and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9506,...

  4. BIOMASS, SALINITY, TEMPERATURE, TAXONOMIC CODE and species abundance tows - plankton tows data collected in the North Atlantic Ocean on the ENDEAVOR and OCEANUS cruises EN307, EN330 and others as part of the GB project from 1997-10-11 to 1999-12-09 (NODC Accession 0106090)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0106090 includes tows - plankton tows, biological and physical data collected aboard the ENDEAVOR and OCEANUS during cruises EN307, EN330, EN331,...

  5. SPECIES IDENTIFICATION - LIFE STAGE and TAXONOMIC CODE tows - plankton tows data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9506, AL9605 and others as part of the GB project from 1995-02-12 to 1999-05-21 (NODC Accession 0107117)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0107117 includes tows - plankton tows and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9506,...

  6. SPECIES IDENTIFICATION - DRY WEIGHT and Displacement Volume tows data collected in the South Atlantic Ocean and South Pacific Ocean on the NATHANIEL B. PALMER cruises NBP0103, NBP0104 and others as part of the Southern Ocean GLOBEC project from 2001-04-30 to 2002-09-11 (NODC Accession 0112163)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112163 includes tows and biological data collected aboard the NATHANIEL B. PALMER during cruises NBP0103, NBP0104, NBP0202 and NBP0204 in the South...

  7. SPECIES IDENTIFICATION - LIFE STAGE and TAXONOMIC CODE pump cast data collected in the North Atlantic Ocean on NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS cruises AL9505, AL9506 and others as part of the GB project from 1995-01-12 to 1999-06-23 (NODC Accession 0107647)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0107647 includes pump cast and biological data collected aboard NOAA Ship ALBATROSS IV, ENDEAVOR and OCEANUS during cruises AL9505, AL9506, AL9508,...

  8. ANIMALS - INDIVIDUAL - COUNTS, SPECIES IDENTIFICATION and ANIMALS - GROUP - BEHAVIOR visual observation data collected in the South Pacific Ocean on the NATHANIEL B. PALMER cruises NBP0103, NBP0104 and others as part of the Southern Ocean GLOBEC project from 2001-04-29 to 2002-09-09 (NODC Accession 0112819)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112819 includes visual observation and biological data collected aboard the NATHANIEL B. PALMER during cruises NBP0103, NBP0104, NBP0202 and NBP0204...

  9. BIOMASS, TAXONOMIC CODE and species abundance tows data collected in the South Atlantic Ocean and South Pacific Ocean on the NATHANIEL B. PALMER cruises NBP0103 and NBP0104 as part of the Southern Ocean GLOBEC project from 2001-04-30 to 2001-08-26 (NODC Accession 0112172)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112172 includes tows and biological data collected aboard the NATHANIEL B. PALMER during cruises NBP0103 and NBP0104 in the South Atlantic Ocean and...

  10. BIOMASS, FLUORESCENCE and species abundance tows - undulating tow and tows data collected in the North Pacific Ocean on the NEW HORIZON, RANGE RECOVERER and THOMAS G. THOMPSON cruises NH0005, NH0007 and others as part of the NEP project from 2000-05-30 to 2002-08-16 (NODC Accession 0114240)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0114240 includes tows - undulating tow, tows and biological data collected aboard the NEW HORIZON, RANGE RECOVERER and THOMAS G. THOMPSON during...

  11. STOMACH CONTENTS - FULLNESS, WATER TEMPERATURE, STOMACH CONTENTS - PREY COUNT, SPECIES IDENTIFICATION and other fish examination data collected in the Gulf of Alaska and North Pacific Ocean on the CHARTER/FISHING BOATS cruises GP0108, GP0207-01 and MF0310 as part of the NEP project from 2001-07-18 to 2003-08-08 (NODC Accession 0115262)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115262 includes biological, fish examination and physical data collected aboard the CHARTER/FISHING BOATS during cruises GP0108, GP0207-01 and...

  12. HABITAT, WATER TEMPERATURE, SPECIES IDENTIFICATION and INDIVIDUAL FISH EXAMINATION - AGE fish examination data collected in the Gulf of Alaska and North Pacific Ocean on the CHARTER/FISHING BOATS cruises GP0108, GP0207-01 and others as part of the NEP project from 2001-07-18 to 2004-11-08 (NODC Accession 0115263)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115263 includes fish examination, biological and physical data collected aboard the CHARTER/FISHING BOATS during cruises GP0108, GP0207-01,...

  13. ANIMALS - INDIVIDUAL - COUNTS, Flight direction, SPECIES IDENTIFICATION, ANIMALS - GROUP - BEHAVIOR and WIND SPEED visual observation data collected in the North Pacific Ocean on the NEW HORIZON cruises NH0005 and NH0007 as part of the NEP project from 2000-05-30 to 2000-08-12 (NODC Accession 0113338)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113338 includes meteorological, visual observation and biological data collected aboard the NEW HORIZON during cruises NH0005 and NH0007 in the...

  14. WIND DIRECTION, Snow thickness, ICE - TYPE, SPECIES IDENTIFICATION - COUNT and other visual observation data collected in the Indian Ocean, South Atlantic Ocean and South Pacific Ocean on the LAURENCE M. GOULD and NATHANIEL B. PALMER cruises LMG0106, LMG0205 and others as part of the Southern Ocean GLOBEC project from 2001-07-26 to 2002-09-15 (NODC Accession 0112820)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112820 includes meteorological, visual observation and physical data collected aboard the LAURENCE M. GOULD and NATHANIEL B. PALMER during cruises...

  15. ICE - COVERAGE, ICE - TYPE, SEDIMENTS - PERCENT COVER, SPECIES IDENTIFICATION - COUNT and precipitation type visual observation data collected in the South Atlantic Ocean and South Pacific Ocean on the NATHANIEL B. PALMER cruises NBP0103, NBP0104 and others as part of the Southern Ocean GLOBEC project from 2001-04-29 to 2002-09-09 (NODC Accession 0112763)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0112763 includes meteorological, visual observation and physical data collected aboard the NATHANIEL B. PALMER during cruises NBP0103, NBP0104,...

  16. ANIMALS - INDIVIDUAL - COUNTS, cetacean and SPECIES IDENTIFICATION marine mammal observation and visual observation data collected in the North Pacific Ocean on the NEW HORIZON cruises NH0005 and NH0007 as part of the NEP project from 2000-05-31 to 2000-08-12 (NODC Accession 0113948)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0113948 includes marine mammal observation, visual observation and biological data collected aboard the NEW HORIZON during cruises NH0005 and NH0007...

  17. HABITAT, WATER TEMPERATURE, SPECIES IDENTIFICATION, cloud amount/frequency and other trawl data collected in the Gulf of Alaska and North Pacific Ocean on the CHARTER/FISHING BOATS cruises GP0108, GP0207-01 and others as part of the NEP project from 2001-07-18 to 2004-11-08 (NODC Accession 0115261)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115261 includes meteorological, biological, physical and trawl data collected aboard the CHARTER/FISHING BOATS during cruises GP0108, GP0207-01,...

  18. SPECIES IDENTIFICATION - ORGANISM LENGTH, HABITAT, STOMACH CONTENTS - FULLNESS, STOMACH CONTENTS - CONTENT WEIGHT and other fish examination data collected in the Coastal Waters of SE Alaska, Gulf of Alaska and North Pacific Ocean on NOAA Ship JOHN N. COBB cruises SECM, jc0009 and others as part of the NEP project from 1997-05-21 to 2006-07-31 (NODC Accession 0115196)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115196 includes biological and fish examination data collected aboard NOAA Ship JOHN N. COBB during cruises SECM, jc0009, jc0012, jc0016, jc0018,...

  19. Collective stimulated Brillouin scatter

    CERN Document Server

    Korotkevich, Alexander O; Rose, Harvey A

    2011-01-01

    We develop a statistical theory of stimulated Brillouin backscatter (BSBS) of a spatially and temporally partially incoherent laser beam for laser fusion relevant plasma. We find a new collective regime of BSBS which has a much larger threshold than the classical threshold of a coherent beam in long-scale-length laser fusion plasma. We identify two contributions to BSBS convective instability increment. The first is collective with intensity threshold independent of the laser correlation time and controlled by diffraction. The second is independent of diffraction, it grows with increase of the correlation time and does not have an intensity threshold. The instability threshold is inside the typical parameter region of National Ignition Facility (NIF). We also find that the bandwidth of KrF-laser-based fusion systems would be large enough to allow additional suppression of BSBS.

  20. Flexicurity and Collective Bargaining

    DEFF Research Database (Denmark)

    Ibsen, Christian Lyhne; Simonsen, Mikkel Mailand

    bargaining and agreements at sector level to the development of flexicurity in print and electrical contracting of the United Kingdom, Denmark and Spain, respectively. The study is primarily based on document analysis of the three countries' collective agreements in print and electrical contracting together...... countries combine flexibility and security. Minimum rates provide a certain degree of income security in shifting jobs and economic downturns while companies can introduce variable pay systems at workplace level. The same logic applies to working time, but here balances between working time flexibility...... as for the transferability of experiences between countries. Learning from the positive experiences in the UK and Denmark seems problematic from the get-go as the general weakening of collective bargaining at sector level in many countries continues. The results of this report do, nonetheless, suggest that under the right...

  1. Collective network routing

    Science.gov (United States)

    Hoenicke, Dirk

    2014-12-02

    Disclosed are a unified method and apparatus to classify, route, and process injected data packets into a network so as to belong to a plurality of logical networks, each implementing a specific flow of data on top of a common physical network. The method allows to locally identify collectives of packets for local processing, such as the computation of the sum, difference, maximum, minimum, or other logical operations among the identified packet collective. Packets are injected together with a class-attribute and an opcode attribute. Network routers, employing the described method, use the packet attributes to look-up the class-specific route information from a local route table, which contains the local incoming and outgoing directions as part of the specifically implemented global data flow of the particular virtual network.

  2. Collecting Passion with a Purpose.

    Science.gov (United States)

    Vandergrift, Kay E.

    1986-01-01

    Explores collecting of children's books and discusses the motivations of collectors, various levels of collecting, bibliographic tools, sources of books, collection patterns, facsimiles, and cataloging. Lists of selected bibliographic tools and selected rare book dealers are included. (EM)

  3. Virulence of Fusarium species to alfalfa seedlings

    Directory of Open Access Journals (Sweden)

    Krnjaja Vesna

    2005-01-01

    Full Text Available In in vitro conditions, virulence of 91 isolates of species Fusarium genus (F. oxysporum, F. solani, F. acuminatum, F. equiseti, F. arthrosporioides, F. prolifera- tum, F. avenaceum, F. semitectum, F. tricinctum, F. sporotrichioides and F. graminearum towards alfalfa seedlings was investigated. Isolates of investigated species originated from diseased alfalfa plants collected at four locations in Serbia based on symptoms of wilting caused by Fusarium and root rotting. Pathogenicity and virulence of investigated isolates of Fusarium spp. were determined by visual evaluation of inoculated seedlings of cultivar K28 in laboratory conditions. All isolated of investigated species had pathogenic effect on alfalfa seedlings which expressed symptoms such as necrosis of root, moist rotting and "melting of seedlings". Colour of necrotic root tissue varied from light brown, brown lipstick red to explicit black, depending on the Fusarium species. Strong virulence was established in 48 isolates, medium virulence in 31 and weak virulence in 12 isolates.

  4. Virulence of Fusarium species to alfalfa seedlings

    Directory of Open Access Journals (Sweden)

    Krnjaja Vesna

    2005-01-01

    Full Text Available In in vitro conditions, virulence of 91 isolates of species Fusarium genus (F. oxysporum, F. solani, F. acuminatum, F. equiseti, F. arthrosporioides, F. proliferatum, F. avenaceum, F. semitectum, F. tricinctum, F. sporotrichioides and F. graminearum towards alfalfa seedlings was investigated. Isolates of investigated species originated from diseased alfalfa plants collected on four locations in Serbia based on symptoms of wilting caused by fusarium and root rotting. Pathogenicity and virulence of investigated isolates of Fusarium spp. were determined by visual evaluation of inoculated seedlings of cultivars K28 in laboratory conditions. All isolated of investigated species had pathogenic effect on alfalfa seedlings, which expressed symptoms such as necrosis of root, moist rotting and "melting of seedlings". Colour of necrotic root tissue varied from light brown, brown, lipstick red to explicit black, depending on the Fusarium species. Strong virulence was established in 48 isolates, medium virulence in 31 and weak virulence in 12 isolates.

  5. Ferroelectricity the fundamentals collection

    CERN Document Server

    Jimenez, Basilio

    2008-01-01

    This indispensable collection of seminal papers on ferroelectricity provides an overview over almost a hundred years of basic and applied research. Containing historic contributions from renowned authors, this book presents developments in an area of science that is still rapidly growing. Although primarily aimed at scientists and academics involved in research, this will also be of use to students as well as newcomers to the field.

  6. Wastewater Collection Systems.

    Science.gov (United States)

    Vallabhaneni, Srinivas

    2016-10-01

    This chapter presents a review of the literature published in 2015 on topics relating to wastewater collection systems. It presents noteworthy advances in research and industry experiences selected from major literature sources. This review is divided into the following sections: sewer system planning; sewer condition assessment/rehabilitation; pump stations/force mains/ system design; operation and maintenance; asset management; and regulatory issues/ integrated planning. PMID:27620080

  7. ASUKA Hydrographic Data Collection

    OpenAIRE

    Uchida, Hiroshi; Imawaki, Shiro; Ichikawa, Hiroshi

    2008-01-01

    Repeated hydrographic surveys across the Kuroshio and its recirculation south of Japan were carried out by a group called ASUKA (Affiliated Surveys of the Kuroshio off Cape Ashizuri) since 1992, Conductivity-temperature-depth profiler (CTD), expendable CTD (XCTD), expendable bathythermograph (XBT), and digital bathythermograph (DBT) data obtained from 155 cruises were collected for a period of 16 years, from November 1992 to May 2008. A uniform data processing was applied to raw data from the...

  8. Innovation and Collective Entrepreneurship

    OpenAIRE

    Spear, Roger

    2012-01-01

    This paper examines different forms of innovation including social innovation, and why innovation and social innovation have become important themes in public policy in a context of the increasing and diverse demands on welfare regimes, and in an era of constrained budgets. It will review different perspectives on innovation and social innovation and the dynamic interaction through collective entrepreneurship in the social and solidarity economy; bringing out process and outcome dimensions of...

  9. Algebraic nonlinear collective motion

    OpenAIRE

    Troupe, J.; Rosensteel, G.

    1999-01-01

    Finite-dimensional Lie algebras of vector fields determine geometrical collective models in quantum and classical physics. Every set of vector fields on Euclidean space that generates the Lie algebra sl(3, R) and contains the angular momentum algebra so(3) is determined. The subset of divergence-free sl(3, R) vector fields is proven to be indexed by a real number $\\Lambda$. The $\\Lambda=0$ solution is the linear representation that corresponds to the Riemann ellipsoidal model. The nonlinear g...

  10. Digital collections and exhibits

    CERN Document Server

    Denzer, Juan

    2015-01-01

    Today's libraries are taking advantage of cutting-edge technologies such as flat panel displays using touch, sound, and hands-free motions to design amazing exhibits using everything from simple computer hardware to advanced technologies such as the Microsoft Kinect. Libraries of all types are striving to add new interactive experiences for their patrons through exciting digital exhibits, both online and off. Digital Collections and Exhibits takes away the mystery of designing stunning digital exhibits to spotlight library trea

  11. Curating Virtual Data Collections

    Science.gov (United States)

    Lynnes, C.; Ramapriyan, H.; Leon, A.; Tsontos, V. M.; Liu, Z.; Shie, C. L.

    2015-12-01

    NASA's Earth Observing System Data and Information System (EOSDIS) contains a rich set of datasets and related services throughout its many elements. As a result, locating all the EOSDIS data and related resources relevant to particular science theme can be daunting. This is largely because EOSDIS data's organizing principle is affected more by the way they are produced than around the expected end use.Virtual collections oriented around science themes can overcome this by presenting collections of data and related resources that are organized around the user's interest, not around the way the data were produced. Science themes can be: Specific applications (uses) of the data, e.g., landslide prediction Geophysical events (e.g., Hurricane Sandy) A specific science research problem Virtual collections consist of annotated web addresses (URLs) that point to data and related resource addresses, thus avoiding the need to copy all of the relevant data to a single place. These URL addresses can be consumed by a variety of clients, ranging from basic URL downloaders (wget, curl) and web browsers to sophisticated data analysis programs such as the Integrated Data Viewer. Eligible resources include anything accessible via URL: data files: data file URLs data subsets: OPeNDAP, webification or Web Coverage Service URLs data visualizations: Web Map Service data search results: OpenSearch Atom response custom analysis workflows: e.g., Giovanni analysis URL

  12. The Origin of Species

    NARCIS (Netherlands)

    Darwin, Charles

    2005-01-01

    In The Origin of Species Darwin outlined his theory of evolution, which proposed that species had been evolving and differentiating over time under the influence of natural selection. On its publication it became hugely influential, bringing about a seismic shift in the scientific view of humanitys

  13. Mysidacea (Crustacea) from the Minicoy lagoon (Lakshadweep, India) with description of a new species of Anisomysis

    Digital Repository Service at National Institute of Oceanography (India)

    Biju, A.; Panampunnayil, S.U.; Prabhakaran, M.P.

    Four species of mysids collected from the Minicoy lagoon are reported. Anisomysis minicoyensis sp. nov. is distinguished from the related species by the shape of the rostrum, the relative length of the antennal scale and the short protuberances...

  14. Dasybasis elquiensis, a new species of horse fly from Northern Chile (Diptera: Tabanidae: Diachlorini

    Directory of Open Access Journals (Sweden)

    González Christian R

    2000-01-01

    Full Text Available The female of Dasybasis elquiensis, new species, is described and illustrated from specimens collected in Paso La Ternera, Elqui Province, north Chile. Its relationships to other Dasybasis species are discussed.

  15. Collective irrationality and positive feedback.

    Directory of Open Access Journals (Sweden)

    Stamatios C Nicolis

    Full Text Available Recent experiments on ants and slime moulds have assessed the degree to which they make rational decisions when presented with a number of alternative food sources or shelter. Ants and slime moulds are just two examples of a wide range of species and biological processes that use positive feedback mechanisms to reach decisions. Here we use a generic, experimentally validated model of positive feedback between group members to show that the probability of taking the best of options depends crucially on the strength of feedback. We show how the probability of choosing the best option can be maximized by applying an optimal feedback strength. Importantly, this optimal value depends on the number of options, so that when we change the number of options the preference of the group changes, producing apparent "irrationalities". We thus reinterpret the idea that collectives show "rational" or "irrational" preferences as being a necessary consequence of the use of positive feedback. We argue that positive feedback is a heuristic which often produces fast and accurate group decision-making, but is always susceptible to apparent irrationality when studied under particular experimental conditions.

  16. Species diversity of vascular plants in Si Phang-nga National Park, Phangnga Province

    Directory of Open Access Journals (Sweden)

    Leeratiwong, C.

    2005-07-01

    Full Text Available A survey of the vascular plants in Si Phang-nga National Park, Phangnga Province, was conducted from September 2002 to August 2003. Five hundred and forty three species of 287 genera and 111 families were collected. The most diverse family was Rubiaceae, 53 species. Four species of these collected plants are endemic to Thailand, Argostemma lobulatum, Aristolochia helix, Crinum thaianum and Mallotus hymenophyllus and three species, Hedyotis hedyotidea, Lipocarpha microcephala and Pterolobium intergum are newly recorded for southern Thailand.

  17. Species diversity of vascular plants in Si Phang-nga National Park, Phangnga Province

    OpenAIRE

    Leeratiwong, C.; Jornead, S.

    2005-01-01

    A survey of the vascular plants in Si Phang-nga National Park, Phangnga Province, was conducted from September 2002 to August 2003. Five hundred and forty three species of 287 genera and 111 families were collected. The most diverse family was Rubiaceae, 53 species. Four species of these collected plants are endemic to Thailand, Argostemma lobulatum, Aristolochia helix, Crinum thaianum and Mallotus hymenophyllus) and three species, Hedyotis hedyotidea, Lipocarpha microcephala and Pterolobium ...

  18. A new species of Smicromyrme from Israel (Hymenoptera: Mutillidae

    Directory of Open Access Journals (Sweden)

    Pietro Lo Cascio

    2014-10-01

    Full Text Available Smicromyrme bartolozzii sp. n. is described from a female specimen collected in a coastal desert of Israel. The new species is similar to S. ellipsifera (Gribodo, 1884, known for some localities of Eritrea, Ethiopia, Egypt and Djibouti. Sculpture of the pygidial plate, punctuation of the head and some morphological features of mesosoma are the main differential characters between both species.

  19. A new species of Symplocos (Symplocaceae) from southern Ecuador.

    Science.gov (United States)

    Ulloa Ulloa, Carmen; Ståhl, Bertil; Minga, Danilo; Ansaloni, Raffaella

    2015-01-01

    A new species from Ecuador, Symplocos limonensis, is here described and illustrated. It resembles Symplocos clethrifolia but differs by having larger leaves with evident (i.e., not concealed) areoles on lower surface, sessile inflorescences, smaller white corollas, and fewer stamens. The species is only known from three collections in the Andean forests of Morona-Santiago Province in southern Ecuador.

  20. Trichoderma (Hypocrea) species with green ascospores from China

    NARCIS (Netherlands)

    Zhu, Z.X.; Zhuang, W.Y.

    2015-01-01

    Stromata of Trichoderma species having green ascospores were collected in various regions of China. Based on morphology of the sexual and asexual morph, culture characteristics, and sequence analyses of rpb2 and tef1 genes, 17 species with green ascospores were identified. Among them, Trichoderma ro

  1. New foliicolous species of Cladosporium from South America

    NARCIS (Netherlands)

    Schubert, K.; Greslebin, A.; Groenewald, J.Z.; Crous, P.W.

    2009-01-01

    Two new species of Cladosporium found on necrotic needles of Pinus ponderosa trees in Patagonia, Argentina, are described as C. chubutense and C. pini-ponderosae. An additional isolate from dead leaves of Cortaderia collected in Colombia, which is a sister taxon to the species occurring on Pinus, is

  2. New species of Ashmeadiella Cockerell (Hymenoptera: Megachilidae) from Mexico

    Science.gov (United States)

    Two new species of bees from Mexico are described and illustrated here: Ashmeadiella (Ashmeadiella) danuncia n. sp. and A. (A.) mandibularis n. sp. These species are most frequently found visiting flowers of Cactaceae, although they have also been collected on flowers of Acacia, Prosopis, Lopezia, D...

  3. Two Species of Myxomycetes Causing Slime Mold of Sweet Potato

    OpenAIRE

    Kim, Wan Gyu; Lee, Sang Yeob; Cho, Weon Dae

    2007-01-01

    Specimens collected from sweet potato plants with slime mold symptoms in fields in Daejeon, Korea were examined. Two species of Myxomycetes, Fuligo septica and Stemonitis herbatica were identified based on their morphological characteristics. This is the first report that the two species of Myxomycetes cause slime mold of sweet potato in Korea.

  4. A new species of Osmia from Iran (Hymenoptera: Megachilidae):

    OpenAIRE

    Engel, Michael S.

    2006-01-01

    A new species of Osmia, subgenus Helicosmia, is described and figured from a male and female collected near Karaj, Iran. Osmia (Helicosmia) mediana sp. n. can be superficially confused with O. (H.) indigotea Morawitz and in other respects O. (H.) adae Bingham. The new species is diagnosed and distinguished from other Helicosmia.

  5. Species of Pleistodontes from the Australian continent (Hymenoptera, Agaonidae)

    NARCIS (Netherlands)

    Wiebes, J.T.

    1990-01-01

    Review of the Australian species of Pleistodontes Saunders (Hymenoptera Chalcidoidea, Agaonidae: fig insects), with description of new species Pleistodontes cuneatus (from Ficus leucotricha Miq.) and P. proximus (from F. platypoda A. Cunn. ex Miq.), both collected in E. Kimberley, W. Australia, and

  6. Records and Distribution of New World Phlebotomine Sand Flies (Psychodidae, Diptera), With Special Emphasis on Primary Types and Species Diversity.

    Science.gov (United States)

    Rueda, Leopoldo M; Foley, Desmond H; Pecor, David; Wolkoff, Matthew

    2015-01-01

    This article includes the records and distribution of Phlebotomine sand flies (Psychodidae, Diptera) in the New World based on the specimen collections housed in 2 repositories, the US National Museum of Natural History and the Museum of Entomology, Florida State Collection of Arthropods. Approximately 128 species have primary types housed in the 2 repositories, including holotypes (47 species, 3 subspecies), "types" (7 species), allotypes (52 species, 6 subspecies), lectotypes (4 species), paratypes (93 species, 10 subspecies), and neoallotype (1 species), mounted on slides, with a total of 1,107 type slides. For species diversity, collection data from 24 countries in the sand fly database were analyzed according to the number of species present, specimen records, decade of collections, and countries where collections were conducted.

  7. Collective Intelligence. Chapter 17

    Science.gov (United States)

    Wolpert, David H.

    2003-01-01

    Many systems of self-interested agents have an associated performance criterion that rates the dynamic behavior of the overall system. This chapter presents an introduction to the science of such systems. Formally, collectives are defined as any system having the following two characteristics: First, the system must contain one or more agents each of which we view as trying to maximize an associated private utility; second, the system must have an associated world utility function that rates the possible behaviors of that overall system. In practice, collectives are often very large, distributed, and support little, if any, centralized communication and control, although those characteristics are not part of their formal definition. A naturally occurring example of a collective is a human economy. One can identify the agents and their private utilities as the human individuals in the economy and the associated personal rewards they are each trying to maximize. One could then identify the world utility as the time average of the gross domestic product. ("World utility" per se is not a construction internal to a human economy, but rather something defined from the outside.) To achieve high world utility it is necessary to avoid having the agents work at cross-purposes lest phenomena like liquidity traps or the Tragedy of the Commons (TOC) occur, in which agents' individually pursuing their private utilities lowers world utility. The obvious way to avoid such phenomena is by modifying the agents utility functions to be "aligned" with the world utility. This can be done via punitive legislation. A real-world example of an attempt to do this was the creation of antitrust regulations designed to prevent monopolistic practices.

  8. Morphometric study of some Salvia L. (Lamiaceae) species in Iran

    OpenAIRE

    Navaz Kharazian

    2012-01-01

    This study concerns the morphological studies in some Salvia L. (Lamiaceae) species in Iran. In order to elucidate the taxonomic status and morphological studies, 53 accessions of 12 Salvia species were collected from their natural habitats in Iran. A total of 17 quantitative and 13 qualitative morphological characters were selected as diagnostic characters in Salvia species through the use of numerical methods. The statistical analysis consisted of cluster analysis with Euclidean distance c...

  9. Diplycosia platyphylla (Ericaceae), a new species from Mindanao, Philippines

    OpenAIRE

    Fritsch, Peter; Amoroso, Victor

    2016-01-01

    Diplycosia platyphylla P.W.Fritsch, a new species from Mindanao Island, Philippines, is described and illustrated. This species is most similar to the Bornean D. urceolata but differs by its green or slightly flushed pink petioles 4–7 mm long, wider leaf blades, acute calyx lobe apices, and lavender mature fruiting calyx. The new species is known only from a single collection made from Mount Apo in North Cotabato Province, southern Mindanao.

  10. A new species of Camchaya (Asteraceae, Vernonieae from Thailand

    Directory of Open Access Journals (Sweden)

    Sukhonthip Bunwong

    2012-05-01

    Full Text Available Camchaya thailandica Bunwong, Chantar. & S.C.Keeley, sp. nov. from Phu Phrabat Historical Park, Udon Thani, Thailand is described as a new species. Plant of this new species are similar to C. gracilis (Gagnep. Bunwong & H.Rob. but differ inovate phyllaries without margin spines, 10-ribbed achenes, and broadly ovate leaves. This species is a rare endemic known only from the type collection and probably confined to open areas of sandstone hills in Udon Thani province.

  11. Percent Stomach Emptiness in Fish Collections: Sources of Variation and Study Design Implications

    Science.gov (United States)

    We summarized fish stomach content data from 369,000 fish from 402 species in 1,096 collections made between 1925 and 2009 and report on the percentage of individuals with empty stomachs (PES). The mean PES among all species, locations, habitats, dates, and collection methods was...

  12. On a collection of bats (Chiroptera) from Kikwit, Democratic Republic of the Congo

    DEFF Research Database (Denmark)

    van Cakenberghe, V.; de Vree, F.; Leirs, Herwig

    1999-01-01

    The collection of vertebrates made in Kikwit in the aftermath of the 1995 Ebola haemorrhagic fever epidemic included 538 bat specimens, representing 18 species. This collection contains large numbers of a very common species, Chaerephon pumila, but also of Chaerephon ansorgei, which was not yet...

  13. Husserl on Collective Intentionality

    DEFF Research Database (Denmark)

    Szanto, Thomas

    2016-01-01

    Unlike Husserl’s theory of empathy and intersubjectivity, his theory of collective intentionality has hardly been studied. In this paper, I shall address this neglected but important aspect of his phenomenology. I will argue that Husserl’s contribution, on closer scrutiny, not only stands......, respectively. On this background, I will concentrate on Husserl’s alternative construal and demonstrate how it entails a robust anti-individualism regarding both the form and the subject of we-intentions. I will suggest that, contrary to appearances, Husserl does not fall prey to committing a content...

  14. Adsorption and collective paramagnetism

    CERN Document Server

    Selwood, Pierce W

    1962-01-01

    Adsorption and Collective Paramagnetism describes a novel method for studying chemisorption. The method is based on the change in the number of unpaired electrons in the adsorbent as chemisorption occurs. The method is applicable to almost all adsorbates, but it is restricted to ferromagnetic adsorbents such as nickel, which may be obtained in the form of very small particles, that is to say, to ferromagnetic adsorbents with a high specific surface. While almost all the data used illustratively have been published elsewhere this is the first complete review of the subject. The book is addresse

  15. Collection of particles

    International Nuclear Information System (INIS)

    Apparatus and a method for collecting particles formed by vaporisation during a high temperature treatment of steel (eg cutting or welding) are described in which gas is drawn from the area in which the treatment is taking place through a collector in which the particles are separated magnetically. The air may be drawn by an air ejector from a hood around the treatment area. The invention has particular application where the high temperature treatment is the laser cutting of the stainless steel wrapper around a nuclear fuel sub-assembly. (author)

  16. Collective Uncertainty Entanglement Test

    CERN Document Server

    Rudnicki, Łukasz; Życzkowski, Karol

    2011-01-01

    For a given pure state of a composite quantum system we analyze the product of its projections onto a set of locally orthogonal separable pure states. We derive a bound for this product analogous to the entropic uncertainty relations. For bipartite systems the bound is saturated for maximally entangled states and it allows us to construct a family of entanglement measures, we shall call collectibility. As these quantities are experimentally accessible, the approach advocated contributes to the task of experimental quantification of quantum entanglement, while for a three-qubit system it is capable to identify the genuine three-party entanglement.

  17. Collection for Philippines

    CERN Multimedia

    Staff Association

    2015-01-01

    Following the devastating Typhoon Haiyan that hit the Philippines in autumn 2013, a collection of funds to help the victims was organised at CERN. An amount of 16 950 CHF had been contributed and was forwarded to Caritas Switzerland. Tuesday 14 July, we received a message from Caritas in order to thank all the contributors for their generosity and to share with you their project’s progress and the results obtained so far. You can find the report on our website: http://staff-association.web.cern.ch/sites/staff-association.web.cern.ch/files/Docs/Rapport_Philippines.pdf

  18. Collection for Refugiees

    CERN Multimedia

    Staff Association

    2015-01-01

    You are wonderful, thank you! In response to the refugee and migration crisis, we organised a collection in October and November which called on your generosity. We are now pleased to announce that the amount raised is CHF 14'710. These funds will be forwarded to the International Federation of Red Cross and Red Crescent Societies to respond to the humanitarian needs of the refugees and migrants, providing immediate and longer-term relief, including emergency medical care and basic health services, psychological support, temporary shelter, distribution of food & water and other urgently needed items. We thank everyone who contributed to this important cause.

  19. LONG TERM COLLECTIONS

    CERN Multimedia

    2004-01-01

    The Committee would like to thank all those, from near and far, who kindly gave donations to the collection organized at the time of the sudden death of our friend and colleague Stephen O'NEALE The sum of 3,615 francs will be sent to the INEPE Association for the education of children in Quito, Ecuador. We are deeply grateful for this gesture from Steve's family and hope that they find comfort in knowing that Steve's memory will live on through the children whose daily lives will be improved by this gift.

  20. Mechanosensory interactions drive collective behaviour in Drosophila.

    Science.gov (United States)

    Ramdya, Pavan; Lichocki, Pawel; Cruchet, Steeve; Frisch, Lukas; Tse, Winnie; Floreano, Dario; Benton, Richard

    2015-03-12

    Collective behaviour enhances environmental sensing and decision-making in groups of animals. Experimental and theoretical investigations of schooling fish, flocking birds and human crowds have demonstrated that simple interactions between individuals can explain emergent group dynamics. These findings indicate the existence of neural circuits that support distributed behaviours, but the molecular and cellular identities of relevant sensory pathways are unknown. Here we show that Drosophila melanogaster exhibits collective responses to an aversive odour: individual flies weakly avoid the stimulus, but groups show enhanced escape reactions. Using high-resolution behavioural tracking, computational simulations, genetic perturbations, neural silencing and optogenetic activation we demonstrate that this collective odour avoidance arises from cascades of appendage touch interactions between pairs of flies. Inter-fly touch sensing and collective behaviour require the activity of distal leg mechanosensory sensilla neurons and the mechanosensory channel NOMPC. Remarkably, through these inter-fly encounters, wild-type flies can elicit avoidance behaviour in mutant animals that cannot sense the odour--a basic form of communication. Our data highlight the unexpected importance of social context in the sensory responses of a solitary species and open the door to a neural-circuit-level understanding of collective behaviour in animal groups. PMID:25533959

  1. Rediscovery of a forgotten snake in an unexpected place and remarks on a small herpetological collection from southeastern Brazil

    NARCIS (Netherlands)

    Hoogmoed, M.S.

    1997-01-01

    A collection of snakes and frogs collected in the area of Porto Real, Rio de Janeiro State, Brazil, was bought in December 1890 and remained unidentified until now. The collection comprises 100 snakes belonging to 18 species and 152 frogs belonging to 19 species. A comparison with the herpetofauna f

  2. Two new species of Parapharyngodon parasites of Sceloporus pyrocephalus, with a key to the species found in Mexico (Nematoda, Pharyngodonidae)

    Science.gov (United States)

    Garduño-Montes de Oca, Edgar Uriel; Mata-López, Rosario; León-Règagnon, Virginia

    2016-01-01

    Abstract Two new species of Parapharyngodon collected from the intestine of the Mexican boulder spiny lizard Sceloporus pyrocephalus are described. This study increases to 49 the number of valid species assigned to Parapharyngodon worldwide, 11 of them distributed in Mexico. Males of the two new species share the presence of four pairs of caudal papillae, an anterior echinate cloacal lip and the presence of lateral alae; however, both differ from each other in lateral alae extension and echinate cloacal anterior lip morphology. Females of both species have a prebulbar uterus and eggs shell punctuate with pores, characteristics shared with few other species of Parapharyngodon. Both new species differ from other congeneric species in the papillar arrangement, the anterior cloacal lip morphology, the lateral alae extension and total length/spicule ratio. A taxonomic key for the species of Parapharyngodon distributed in Mexico is provided. PMID:27006602

  3. Description of two new species of Tetracneminae Howard (Hymenoptera: Encyrtidae from India with key to the species

    Directory of Open Access Journals (Sweden)

    Tirunagaru Krishnachaitanya

    2016-04-01

    Full Text Available Two new species of Tetracneminae (Hymenoptera: Chalcidoidea: Encyrtidae are described from the material collected from Andhra Pradesh and Tamil Nadu states of India. They are: Charitopus montibus sp. nov. and Eotopus elongare sp. nov. A key to the Indian species of both genera is provided.

  4. On a new species of the genus Testudo

    NARCIS (Netherlands)

    Lidth de Jeude, van Th.W.

    1893-01-01

    On arranging the tortoises of the genus Testudo in the collections of the Leyden Museum I met with a mounted specimen, collected at the Cape of Good Hope by the late Kuhl and van Hasselt, which though having much in common with Testudo geometrica L., yet in other points differs from that species and

  5. Long-Term Collections

    CERN Multimedia

    Staff Association

    2016-01-01

    45 years helping in developing countries! CERN personnel have been helping the least fortunate people on the planet since 1971. How? With the Long-Term Collections! Dear Colleagues, The Staff Association’s Long-Term Collections (LTC) Committee is delighted to share this important milestone in the life of our Laboratory with you. Indeed, whilst the name of CERN is known worldwide for scientific discoveries, it also shines in the many humanitarian projects which have been supported by the LTC since 1971. Several schools and clinics, far and wide, carry its logo... Over the past 45 years, 74 projects have been supported (9 of which are still ongoing). This all came from a group of colleagues who wanted to share a little of what life offered them here at CERN, in this haven of mutual understanding, peace and security, with those who were less fortunate elsewhere. Thus, the LTC were born... Since then, we have worked as a team to maintain the dream of these visionaries, with the help of regular donat...

  6. DataCollection Prototyping

    CERN Multimedia

    Beck, H.P.

    DataCollection is a subsystem of the Trigger, DAQ & DCS project responsible for the movement of event data from the ROS to the High Level Triggers. This includes data from Regions of Interest (RoIs) for Level 2, building complete events for the Event Filter and finally transferring accepted events to Mass Storage. It also handles passing the LVL1 RoI pointers and the allocation of Level 2 processors and load balancing of Event Building. During the last 18 months DataCollection has developed a common architecture for the hardware and software required. This involved a radical redesign integrating ideas from separate parts of earlier TDAQ work. An important milestone for this work, now achieved, has been to demonstrate this subsystem in the so-called Phase 2A Integrated Prototype. This prototype comprises the various TDAQ hardware and software components (ROSs, LVL2, etc.) under the control of the TDAQ Online software. The basic functionality has been demonstrated on small testbeds (~8-10 processing nodes)...

  7. Partonic collectivity at RHIC

    Science.gov (United States)

    Shi, Shusu

    2009-10-01

    The measurement of event anisotropy, often called v2, provides a powerful tool for studying the properties of hot and dense medium created in high-energy nuclear collisions. The important discoveries of partonic collectivity and the brand-new process for hadronization - quark coalescence were obtained through a systematic analysis of the v2 for 200 GeV Au+Au collisions at RHIC [1]. However, early dynamic information might be masked by later hadronic rescatterings. Multistrange hadrons (φ, ξ and φ) with their large mass and presumably small hadronic cross sections should be less sensitive to hadronic rescattering in the later stage of the collisions and therefore a good probe of the early stage of the collision. We will present the measurement of v2 of π, p, KS^0, λ, ξ, φ and φ in heavy ion collisions. In minimum-bias Au+Au collisions at √sNN = 200 GeV, a significant amount of elliptic flow, almost identical to other mesons and baryons, is observed for φ and φ. Experimental observations of pT dependence of v2 of identified particles at RHIC support partonic collectivity. [4pt] [1] B. I. Abelev et al., (STAR Collaboration), Phys. Rev. C 77, 054901 (2008).

  8. Collective ion acceleration

    International Nuclear Information System (INIS)

    Progress achieved in the understanding and development of collective ion acceleration is presented. Extensive analytic and computational studies of slow cyclotron wave growth on an electron beam in a helix amplifier were performed. Research included precise determination of linear coupling between beam and helix, suppression of undesired transients and end effects, and two-dimensional simulations of wave growth in physically realizable systems. Electrostatic well depths produced exceed requirements for the Autoresonant Ion Acceleration feasibility experiment. Acceleration of test ions to modest energies in the troughs of such waves was also demonstrated. Smaller efforts were devoted to alternative acceleration mechanisms. Langmuir wave phase velocity in Converging Guide Acceleration was calculated as a function of the ratio of electron beam current to space-charge limiting current. A new collective acceleration approach, in which cyclotron wave phase velocity is varied by modulation of electron beam voltage, is proposed. Acceleration by traveling Virtual Cathode or Localized Pinch was considered, but appears less promising. In support of this research, fundamental investigations of beam propagation in evacuated waveguides, of nonneutral beam linear eigenmodes, and of beam stability were carried out. Several computer programs were developed or enhanced. Plans for future work are discussed

  9. Cicadidae types (Hemiptera-Cicadomorpha) housed at the Museo de La Plata entomological collection (Argentina).

    Science.gov (United States)

    De Remes Lenicov, Ana M Marino; Maciá, Arnaldo; Pianzola, Bruno

    2015-06-23

    A catalog of the 161 type specimens of species of Hemiptera Cicadidae housed in the collection of the Entomology Division of the Museo de La Plata is presented. This collection represents 52 species grouped in 19 genera. For each species the original and current names, bibliographic references, type category, number of specimens, gender, Museo de La Plata code numbers, and transcription of data from labels (country, province, locality, date of collection, collector's name, and hosts) are given. Information about the state of preservation of the specimens in each series and photographs of each type species are also provided.

  10. Arthrobacter enclensis sp. nov., isolated from sediment sample

    Digital Repository Service at National Institute of Oceanography (India)

    Dastager, S.G.; Qin, L.; Tang, S.K.; Krishnamurthi, S.; Lee, J.C.; Li, W.J.

    ,000 replicates. The DNA G+C content (mol%) was estimated accord- ing to Gonzalez and Saiz-Jimenez (2002). ΔTm values between homologous and hybrid DNA are analysed by real-time PCR (Gonzalez and Saiz-Jimenez 2005). For DNA–DNA hybridization experiments...:228–230 Gillis M, De Ley J, De Cleene M (1970) The determination of molec- ular weight of bacterial genome DNA from renaturation rates. Eur J Biochem 12:143–153 Gonzalez JM, Saiz-Jimenez C (2002) A fluorimetric method for the estimation of G+C mol% content...

  11. CURRENT STATE OF THE COLLECTION OF MEDICINAL PLANTS OF THE YAKUTSK BOTANICAL GARDEN

    Directory of Open Access Journals (Sweden)

    Semenova V. V.

    2016-02-01

    Full Text Available The article considers data on the stocktaking of plants in the collection of medicinal plants of the Yakut Botanical Garden on the following parameters: the study of the component composition, the inclusion in the Pharmacopoeia articles and the Russian State Register of medicinal products. Introduction test in the collection has been performed for 158 species from 99 genera and 41 families, currently the collection has 101 species from 79 genera and 34 families. Chemical composition of plants is known for 61 species. 17 species are pharmacopoeal and 15 species make medicinal products available. The rest of the medicinal plants can be used in folk medicine. Most represented are Asteraceae family (25, Ranunculaceae (20, Rosaceae (16, Fabaceae (15, Lamiaceae (13, among tested plants. According to the assessment of introduction capabilities, 49 species in the collection are highly stable, 51 - stable and just one is unstable

  12. How reticulated are species?

    Science.gov (United States)

    Mallet, James; Besansky, Nora; Hahn, Matthew W

    2016-02-01

    Many groups of closely related species have reticulate phylogenies. Recent genomic analyses are showing this in many insects and vertebrates, as well as in microbes and plants. In microbes, lateral gene transfer is the dominant process that spoils strictly tree-like phylogenies, but in multicellular eukaryotes hybridization and introgression among related species is probably more important. Because many species, including the ancestors of ancient major lineages, seem to evolve rapidly in adaptive radiations, some sexual compatibility may exist among them. Introgression and reticulation can thereby affect all parts of the tree of life, not just the recent species at the tips. Our understanding of adaptive evolution, speciation, phylogenetics, and comparative biology must adapt to these mostly recent findings. Introgression has important practical implications as well, not least for the management of genetically modified organisms in pest and disease control. PMID:26709836

  13. Threatened & Endangered Species Occurrences

    Data.gov (United States)

    Kansas Data Access and Support Center — The database consists of a single statewide coverage of location records for 54 species contained in the Kansas Natural Heritage Inventory database of the Kansas...

  14. Lista dos exemplares tipos de Ceratopogonidae (Diptera: Nematocera depositados na Coleção Entomológica do Instituto Oswaldo Cruz, Rio de Janeiro, Brasil List of the type species of Ceratopogonidae (Diptera, Nematocera deposited in the Entomological Collection of Instituto Oswaldo Cruz, Rio de Janeiro, Brazil

    Directory of Open Access Journals (Sweden)

    ML Felippe-Bauer

    2001-11-01

    Full Text Available A list of all type specimens of the Family Ceratopogonidae, present in the Entomological Collection of Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brazil is presented. This list includes the genera Bahiahelea, Culicoides, Dasyhelea, Downeshelea, Forcipomyia, Leptoconops, Mallochohelea, Monohelea, Neobezzia, Palpomyia and Sphaerohelea.

  15. Communication on invasive species

    OpenAIRE

    2014-01-01

    Like any other environmental problem, control of invasive species needs to be based on awareness of the implications by the public and by private enterprise. Active, informed public support is a major factor for success in managing a pest crisis; regulations and coercive measures alone do not succeed. Which raises the question of what to communicate, and how. There may be conflicts of interest where alien species are concerned because some of them are a source of income, pleasure or even a st...

  16. Genetic assessment of ornamental fish species from North East India.

    Science.gov (United States)

    Dhar, Bishal; Ghosh, Sankar Kumar

    2015-01-25

    Ornamental fishes are traded with multiple names from various parts around the world, including North East India. Most are collected from the wild, due to lack of species-specific culture or breeding, and therefore, such unmanaged collection of the wild and endemic species could lead to severe threats to biodiversity. Despite many regulatory policies, trade of threatened species, including the IUCN listed species have been largely uncontrolled, due to species identification problems arising from the utilization of multiple trade names. So, the development of species-specific DNA marker is indispensable where DNA Barcoding is proved to be helpful in species identification. Here, we investigated, through DNA Barcoding and morphological assessment, the identification of 128 ornamental fish specimens exported from NE India from different exporters. The generated sequences were subjected to similarity match in BOLD-IDS as well as BLASTN, and analysed using MEGA5.2 for species identification through Neighbour-Joining (NJ) clustering, and K2P distance based approach. The analysis revealed straightforward identification of 84 specimens into 35 species, while 44 specimens were difficult to distinguish based on CO1 barcode alone. However, these cases were resolved through morphology, NJ and distanced based method and found to be belonging to 16 species. Among the 51 identified species, 14 species represented multiple trade names; 17 species belonged to threatened category. Species-level identification through DNA Barcoding along with traditional morphotaxonomy reflects its efficacy in regulating ornamental fish trade and therefore, appeals for their conservation in nature. The use of trade names rather than the zoological name created the passage for trafficking of the threatened species and demands immediate attention for sustaining wildlife conservation. PMID:25447914

  17. Confining collective motion

    Science.gov (United States)

    Bartolo, Denis; Bricard, Antoine; Caussin, Jean-Baptiste; Savoie, Charles; Das, Debasish; Chepizhko, Oleskar; Peruani, Fernando; Saintillan, David

    2014-11-01

    It is well established that geometrical confinement have a significant impact on the structure and the flow properties of complex fluids. Prominent examples include the formation of topological defects in liquid crystals, and the flow instabilities of viscoelastic fluids in curved geometries. In striking contrast very little is known about the macroscopic behavior of confined active fluids. In this talk we show how to motorize plastic colloidal beads and turn them into self-propelled particles. Using microfluidic geometries we demonstrate how confinement impacts their collective motion. Combining quantitative experiments, analytical theory and numerical simulations we show how a population of motile bodies interacting via alignement and repulsive interactions self-organizes into a single heterogeneous macroscopic vortex that lives on the verge of a phase separation.

  18. Emergence of collective memories

    CERN Document Server

    Lee, Sungmin; Holme, Petter

    2010-01-01

    We understand the dynamics of the world around us as by associating pairs of events, where one event has some influence on the other. These pairs of events can be aggregated into a web of memories representing our understanding of an episode of history. The events and the associations between them need not be directly experienced-they can also be acquired by communication. In this paper we take a network approach to study the dynamics of memories of history. First we investigate the network structure of a data set consisting of reported events by several individuals and how associations connect them. We focus our measurement on degree distributions, degree correlations, cycles (which represent inconsistencies as they would break the time ordering) and community structure. We proceed to model effects of communication using an agent-based model. We investigate the conditions for the memory webs of different individuals to converge to collective memories, how groups where the individuals have similar memories (b...

  19. Geoengineering as Collective Experimentation.

    Science.gov (United States)

    Stilgoe, Jack

    2016-06-01

    Geoengineering is defined as the 'deliberate and large-scale intervention in the Earth's climatic system with the aim of reducing global warming'. The technological proposals for doing this are highly speculative. Research is at an early stage, but there is a strong consensus that technologies would, if realisable, have profound and surprising ramifications. Geoengineering would seem to be an archetype of technology as social experiment, blurring lines that separate research from deployment and scientific knowledge from technological artefacts. Looking into the experimental systems of geoengineering, we can see the negotiation of what is known and unknown. The paper argues that, in renegotiating such systems, we can approach a new mode of governance-collective experimentation. This has important ramifications not just for how we imagine future geoengineering technologies, but also for how we govern geoengineering experiments currently under discussion.

  20. Networks for Collective Action

    CERN Document Server

    Bruggeman, Jeroen

    2016-01-01

    A significant challenge is to explain how people cooperate for public goods. The problem is more difficult for people when their public good and its benefits are unclear at the outset and its timing and costs are uncertain. However, history shows that even under adverse conditions, people can cooperate. As a prelude to cooperation, people can establish (or reinforce) social ties through communication. Consequently, individuals' cognitive states may synchronize, so that they can depend on like-minded people rather than on a situation beyond their control. Whether this succeeds largely depends on the network that is formed (or used), which should also help them to overcome misunderstandings and to synchronize relatively fast. From a well-known model of social influence it is inferred that network patterns with high algebraic connectivity, featuring multiple independent connections, are optimal for collective action.

  1. Geoengineering as Collective Experimentation.

    Science.gov (United States)

    Stilgoe, Jack

    2016-06-01

    Geoengineering is defined as the 'deliberate and large-scale intervention in the Earth's climatic system with the aim of reducing global warming'. The technological proposals for doing this are highly speculative. Research is at an early stage, but there is a strong consensus that technologies would, if realisable, have profound and surprising ramifications. Geoengineering would seem to be an archetype of technology as social experiment, blurring lines that separate research from deployment and scientific knowledge from technological artefacts. Looking into the experimental systems of geoengineering, we can see the negotiation of what is known and unknown. The paper argues that, in renegotiating such systems, we can approach a new mode of governance-collective experimentation. This has important ramifications not just for how we imagine future geoengineering technologies, but also for how we govern geoengineering experiments currently under discussion. PMID:25862639

  2. Innovation and collective entrepreneurship

    DEFF Research Database (Denmark)

    Spear, Roger

    2012-01-01

    different perspectives on innovation and social innovation and the dynamic interaction through collective entrepreneurship in the the social and solidarity economy; bringing out process and outcome dimensions of innovation. And it will develop an understanding of the drivers and barriers to innovation......This paper aims to examine different forms of innovation including social innovation, and why innovation and social innovation have become important themes in public policy – in a context of the increasing and diverse demands on welfare regimes, and in an era of constrained budgets. It will review......, including the role of the institutional and policy framework. It will set this analysis within the context of public policy, demonstrating the role of public policy in enabling such innovations in the social and solidarity economy....

  3. Collective biogas plants

    International Nuclear Information System (INIS)

    Papers contributed to the European seminar on collective biogas plants held at Herning, Denmark on October 22-23 under the auspices of the Commission of the European Communities, Directorate-General for Energy (DG XVII) are presented. Within the framework of the THERMIE programme, a network of OPETs (Organizations for the Promotion of Energy Technologies) was set up in order to disseminate information on new energy technologies throughout the European communities. The potential for further implementation of centralized capacity for the conversion of animal manures and other organic wastes to bio-fuels, not only in central and eastern Europe but also in the developing countries, is discussed in addition to the relevant technologies. Actual biomass conversion plants are described and details are given on operational experience and plant management. Agricultural, economic and policy aspects are also dealt with. (AB)

  4. Solar energy collection system

    Science.gov (United States)

    Miller, C. G.; Stephens, J. B. (Inventor)

    1979-01-01

    A fixed, linear, ground-based primary reflector having an extended curved sawtooth-contoured surface covered with a metalized polymeric reflecting material, reflects solar energy to a movably supported collector that is kept at the concentrated line focus reflector primary. The primary reflector may be constructed by a process utilizing well known freeway paving machinery. The solar energy absorber is preferably a fluid transporting pipe. Efficient utilization leading to high temperatures from the reflected solar energy is obtained by cylindrical shaped secondary reflectors that direct off-angle energy to the absorber pipe. A seriatim arrangement of cylindrical secondary reflector stages and spot-forming reflector stages produces a high temperature solar energy collection system of greater efficiency.

  5. The Holothurioidea (Echinodermata) collected during the Tyro Mauritania-II expedition 1988

    NARCIS (Netherlands)

    Massin, C.

    1993-01-01

    During the tyro Mauritania-II expedition (5-21.vi.1988) 15 holothurian species were collected between 19 and 1,900 m depth. Twelve species are new to the fauna of Mauritania, including Paracucumaria deridderae spec. nov. Mauritania represents the southern distribution limit of four species also know

  6. Campsomerinae (Hymenoptera, Scoliidae) collected in Malawi (Central Africa) between 1968 and 1973

    NARCIS (Netherlands)

    Schulten, G.G.M.

    1975-01-01

    A collection of 301 Campsomerinae (Hymenoptera; Scoliidae) was made in Malawi (Central Africa) between 1968 – 1973. The specimens belong to 14 species, 10 subspecies and 4 formae, of which 5 species, 2 subspecies and 3 formae are new to the fauna of Malawi. A description is given of two new species

  7. New species of mayflies (Ephemeroptera) from Cape Verde.

    Science.gov (United States)

    Soldán, Tomáš; Bojková, Jindřiška

    2015-01-01

    To date, no mayflies have been described from Cape Verde, an archipelago of volcanic islands in the Atlantic Ocean. Based on the material collected on two islands, Santo Antão and Santiago, two species of the genus Cloeon Leach, 1815 (Ephemeroptera: Baetidae) are described based on larvae and imagines. Cloeon morna sp. n., collected in Santo Antão, and C. sidadi sp. n., collected in Santiago, have 3-segmented maxillary palps and tapered labial palps of larvae. The new species can be distinguished from each other and from other West-African species of the genus mainly according to details of the lateral spines on larval abdominal segments and characteristic colourations of vitta and terga in female imagines and colours of male turbinate eyes. Affinities to the West African species of the genus are discussed. PMID:25781802

  8. Species Composition and Relative Abundance of Mosquitoes in Swat, Pakistan

    Directory of Open Access Journals (Sweden)

    Ikram Ilahi

    2013-04-01

    Full Text Available A comprehensive survey of mosquitoes (Diptera: Culicidae was conducted in Swat Pakistan, from April to September during 2000. The survey involved the sampling of both, adult and immature stages of mosquitoes, and recovered a total of 21 species in five genera. Sampling of adult mosquitoes involved Pyrethrum spray collections, Man-biting collections, and Animal-biting collection. Immature stages of mosquitoes were collected from variety of habitats including springs, irrigation channels, rice fields, marshes, temporary pools, construction pools, agriculture pools, river margins, ditches, waste water drains, wells and tree holes. During the study most of the species built up their populations in June, July and August, while a few increased their populations in September. During the survey of immature stages, from a total of 138 samples taken, Cx. quinquefasciatus showed maximum frequency of occurrence (recovered from 48 samples followed by An. maculatus (17 samples, Cx. pseudovishnui (14 samples, An. annularis and An. stephensi (13 samples each, Cx. bitaeniorhynchus (11 samples, An. splendidus (5 samples and Cx. theileri (4 samples. The rest of the species occurred infrequently. The observations on habitat specificity of different species of mosquitoes showed the rice fields as the most favorable site for mosquito breeding (harboring 12 species followed by river margins (five species and temporary pools and springs (four species each. During this study Ae. aegypti was recovered from tyres in Mingora; it was not reported earlier from Swat.

  9. Odonata collected in Hainan and Guangdong Provinces, China in 2014

    OpenAIRE

    Garrison, Rosser W.; Cordero-Rivera, Adolfo; Zhang, Haomiao

    2015-01-01

    A three week trip to Hainan and Guangdong provinces was conducted between 26 May and 11 June 2014, sampling odonates within the vicinity of Diaoluoshan National Nature Reserve, Shuimanxing Village (both Hainan Province) and Nankunshan Nature Reserve (Guangdong Province). Additionally, Cordero and Zhang collected at Shuimanxing Village between 13 and 23 June. A total of 103 species in 78 genera were found for Hainan Province and 51 species in 42 genera in Guangdong Province. Lists of all spec...

  10. PHEMERANTHUS CONFERTIFLORUS: NEW ALIEN SPECIES TO EUROPE

    OpenAIRE

    NAGODĂ Eugenia; COMĂNESCU Petronela; ANASTASIU Paulina

    2013-01-01

    Phemeranthus confertiflorus (Montiaceae) is reported as a new alien species to Europe. It is native to North America and used as decorative in rock gardens. The specimens of this plant were collected in Bucharest (Romania) and deposited in BUC. The mode of introduction of the plant is unknown, most likely escaped from cultivation. Data about habitat and population of the taxon are presented. One of the plants that accompany Phemeranthus confertiflorus is also an alien to Europe – Portulaca pi...

  11. Results of the Rumphius Biohistorical Expedition to Ambon . Part 12. The Asteroidea (Echinodermata) collected from Ambon, Indonesia

    NARCIS (Netherlands)

    Fujita, T.; Marsh, L.M.

    2004-01-01

    During the Rumphius Biohistorical Expedition (4.xi-17.xii.1990) and some additional field trips to Ambon, a total of 26 species of asteroids were collected. Seven species were new to Ambon, and four species new to Indonesia. The asteroid fauna of Ambon is now represented by 44 species. Anthenea diff

  12. Recurrent habitat disturbance and species diversity in a multiple-competitive species system.

    Science.gov (United States)

    Ohsawa, Kyoko; Kawasaki, Kohkichi; Takasu, Fugo; Shigesada, Nanako

    2002-05-21

    To address how species interactions, dispersal and environmental disturbances interplay to affect the spatial distribution and diversity of species, we present a compartment model in which multiple species undergo competitive interaction of Lotka-Volterra type in a patchy environment arranged in a square lattice. Dispersal of species occurs between adjacent patches. Disturbances are periodically imposed on a central part of the environment in a belt-like block or an island-like block of various sizes where each species is killed for a certain time interval and then allowed to recover for the rest of a disturbance cycle. We deal with a case in which the local population dynamics within each patch is analytically determinable and has multiple locally stable equilibrium states in the absence of environmental disturbance. We further assume a trade-off between the reproductive rate of species and its dispersal ability. With these settings, we numerically examine how the spatio-temporal distributions of species are affected by changes in the pattern, size and duration of disturbances. The results demonstrate that: (1) in the undisturbed area, environmental disturbances could generate spatially segregated distributions of species; (2) in the disturbed area, species with higher dispersal abilities quickly invade and preferentially recover their population during the post-disturbance period, being temporarily relieved of competition from other species. These mechanisms collectively lead to increased species diversity in the whole habitat, functioning best when both the size and duration of disturbances are intermediate. In particular, the belt-like disturbance is more effective than the island-like disturbance in sustaining spatial heterogeneity for a wider range of duration of disturbance. PMID:12079366

  13. Assessment of weed species composition and species diversity in some fruit orchards

    Directory of Open Access Journals (Sweden)

    Patience Olorunmaiye

    2013-05-01

    Full Text Available Fruits are often perennial crops and therefore can be invaded by weeds at many different times of the year because of their varied life-cycle. Thus a weed survey was conducted in some fruit orchards containing guava/soursop, mango, irvingia and plantain/banana at the National Horticultural Research Institute (NIHORT Ibadan in 2009 cropping season to determine weed species composition and species diversity. Weeds were sampled from each fruit orchard with a 0.5m × 0.5m wooden quadrat, identified to species level, counted and recorded. Data collected were used to calculate relative frequency, relative density and importance relative value for each species. Result shows that 45 weed species were encountered in all the fruit orchards and mango orchard had the highest species diversity (33 species while the least was recorded in guava/soursop orchard (10 species. All these 10 species had their relative frequencies > 5% out of which Ageratum conyzoides > Panicum maximum > Cyperus esculentus > Chromolaena odorata > Commelina erecta are of ecological importance. Three weed species: Ageratum conyzoides, Centrosema pubescens and Panicum maximum associated with all the fruit orchards in all the locations and T. procumbens was the most abundant and most dominant species in guava/soursop, irvingia and plantain/banana orchards while Echinocloa phyllopogon followed the same trend in mango orchard. These weeds are low-growing plants and regular weeding before seed formation will help to reduce their abundance in these orchards so that they do not interfere with harvesting of these fruits.

  14. Catalog of Osteological Collections of Aquatic Mammals from Mexico

    OpenAIRE

    Vidal, Omar

    1991-01-01

    This paper compiles available information on osteological and other anatomical specimens of at least 51 species of aquatic mammals (34 extant, one recently extinct and 16 fossil) collected in Mexico between 1868 and 1990 and housed in 29 scientific institutions (18 in the USA, nine in Mexico, one in the Netherlands, and one in England). These collections contain a total of 1427 specimens representing 10 families of odontocetes (Squalodontidaet , Rhabdosteidaet , Pontoporiidae, Albireonidae...

  15. WHITE BLISTER SPECIES (Albuginaceae ON WEEDS

    Directory of Open Access Journals (Sweden)

    Karolina Vrandečić

    2011-06-01

    Full Text Available The obligate fungi inside the family Albuginaceae are widespread world wide and cause white rust or white blister disease. Mycopopulation of weeds has been researched within the project „The role of weeds in epidemiology of row-crop diseases“. The aim of this research was to identify white blister species occurring on weeds in Eastern Croatia. Weed plants with disease symptoms characteristic for white blister species have been collected since 2001 on location Slavonia and Baranja country. Determination of white blister species was based on morphological characters of pathogen and the host. Wilsoniana bliti was determined on Amaranthus retroflexus and Amaranthus hybridus leaves. Capsella bursa pastoris is a host for Albugo candida. Ambrosia artemisiifolia is a host for Pustula sp. and Cirsium arvense was found to be host for Pustula spinulosa. Wilsoniana portulaceae was determined on Portulaca oleracea.

  16. Marine macrophytes : Macroalgae species and life forms from Golden Beach, Similajau National Park, Bintulu, Sarawak, Malaysia

    OpenAIRE

    Muta Harah, Zakaria; Japar Sidik, Bujang; Raesah, Amit; Suzalina Akma, Awing; Ogawa, Hisao

    2006-01-01

    A study on macroalgae was carried out around Golden Beach, Similajau National Park during the month of April 2005. Collections and recordings of macroalgae species and life forms were conducted during low tide period. A total of 35 macroalgae were identified belonging to 27 genera comprising of 10 species (28.6%) Chlorophyta, 6 species (17.1%) Phaeophyta and 19 species (54.3%) Rhodophyta. Sargassum paniculatum, the common species inhabited the sand and rock substrates. Entero-morpha intestina...

  17. Concepts of keystone species and species importance in ecology

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    This paper discussed the keystone species concept and introduced the typical characteristics of keystone species and their identification in communities or ecosystems. Based on the research of the keystone species, the concept of species importance (SI) was first advanced in this paper. The species importance can be simply understood as the important value of species in the ecosystem, which consists of three indexes: species structural important value (SIV), functional important value (FIV) and dynamical important value (DIV). With the indexes, the evaluation was also made on species importance of arbor trees in the Three-Hardwood forests (Fraxinus mandshurica, Juglans mandshurica, and Phellodendron amurense) ecosystem.

  18. Collection for Ecuador

    CERN Multimedia

    Staff Association

    2016-01-01

    Following the terrible earthquake in Ecuador on April 16th, 2016, a collection was organized at CERN and sent to the INEPE Institute in Quito to help the victims. CERN has received the following two letters that we want to share with you. We wish our Ecuadorian friends a prompt recovery and keep them in our thoughts! Dear Fabiola and Alessandro, […] As the CERN contact person in Ecuador, and as the Country Representative for Ecuador in the CMS Experiment, I would like to thank you, the offices you precede and, through you, the whole CERN community, for all the concern and generosity after the terrible earthquake in the coast of Ecuador.  Rather slowly, but full of hope, our people are overcoming this difficult situation.  Contributions from different sources abroad, like CERN's, combined with the rapid and generous local intervention, have greatly helped the affected communities cope with the most urgent needs in order to restart their lives. Once again, I express my ...

  19. LONG TERM COLLECTIONS

    CERN Multimedia

    STAFF ASSOCIATION

    2010-01-01

    ACKNOWLEDGMENTS The Long-Term Collections (CLT) committee would like to warmly thank its faithful donors who, year after year, support our actions all over the world. Without you, all this would not be possible. We would like to thank, in particular, the CERN Firemen’s Association who donated 5000 CHF in the spring thanks to the sale of their traditional calendar, and the generosity of the CERN community. A huge thank you to the firemen for their devotion to our cause. And thank you to all those who have opened their door, their heart, and their purses! Similarly, we warmly thank the CERN Yoga Club once again for its wonderful donation of 2000 CHF we recently received. We would also like to tell you that all our projects are running well. Just to remind you, we are currently supporting the activities of the «Réflexe-Partage» Association in Mali; the training centre of «Education et Développement» in Abomey, Benin; and the orphanage and ...

  20. Long-Term Collection

    CERN Multimedia

    Staff Association

    2016-01-01

    Dear Colleagues, As previously announced in Echo (No. 254), your delegates took action to draw attention to the projects of the Long-Term Collections (LTC), the humanitarian body of the CERN Staff Association. On Tuesday, 11 October, at noon, small Z-Cards were widely distributed at the entrances of CERN restaurants and we thank you all for your interest. We hope to have achieved an important part of our goal, which was to inform you, convince you and find new supporters among you. We will find out in the next few days! An exhibition of the LTC was also set up in the Main Building for the entire week. The Staff Association wants to celebrate the occasion of the Long-Term Collection’s 45th anniversary at CERN because, ever since 1971, CERN personnel have showed great support in helping the least fortunate people on the planet in a variety of ways according to their needs. On a regular basis, joint fundraising appeals are made with the Directorate to help the victims of natural disasters around th...