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Sample records for angelica gigas inhibits

  1. An ethanolic extract of Angelica gigas improves atherosclerosis by inhibiting vascular smooth muscle cell proliferation

    OpenAIRE

    Jang, Ja Young; Kim, Jihyun; Cai, Jingmei; Kim, Youngeun; Shin, Kyungha; Kim, Tae-Su; Lee, Sung-Pyo; Park, Sung Kyeong; Choi, Ehn-Kyoung; Kim, Yun-Bae

    2014-01-01

    The effects of an ethanolic extract of Angelica gigas (EAG) on the vascular smooth muscle cell (VSMC) proliferation and high-cholesterol diet-induced hypercholesterolemia and atherosclerosis were investigated. Rat aortic VSMCs were stimulated with platelet-derived growth factor-BB (25 ng/mL) for the induction of DNA synthesis and cell proliferation. EAG (1-10 µg/mL) significantly inhibited both the thymidine incorporation and cell proliferation in a concentration-dependent manner. Hypercholes...

  2. Antifungal Activity of Decursinol Angelate Isolated from Angelica gigas Roots Against Puccinia recondita

    OpenAIRE

    Mi-Young Yoon; Kyoung Soo Jang; Gyung Ja Choi; Young Sup Kim; Yong Ho Choi; Jin-Cheol Kim; Byeongjin Cha

    2011-01-01

    Rust causes significant losses in the yield and quality of various crops. The development of new effective and environmentally benign agents against the pathogen is of great interest. In the course of searching a natural antifungal compound from medicinal plants, we found that the methanol extract of Angelica gigas roots had a potent control efficacy against wheat leaf rust (WLR) caused by Puccinia recondita. The antifungal substance was isolated from the methanol extract by silica gel column...

  3. Effects of gamma irradiation on the yields of volatile extracts of Angelica gigas Nakai

    Science.gov (United States)

    Seo, Hye-Young; Kim, Jun-Hyoung; Song, Hyun-Pa; Kim, Dong-Ho; Byun, Myung-Woo; Kwon, Joog-Ho; Kim, Kyong-Su

    2007-11-01

    The study was carried out to determine the effects of gamma irradiation on the volatile flavor components including essential oils, of Angelica gigas Nakai. The volatile organic compounds from non- and irradiated A. gigas Nakai at doses of 1, 3, 5, 10 and 20 kGy were extracted by a simultaneous steam distillation and extraction (SDE) method and identified by GC/MS analysis. A total of 116 compounds were identified and quantified from non- and irradiated A. gigas Nakai. The major volatile compounds were identified 2,4,6-trimethyl heptane, α-pinene, camphene, α-limonene, β-eudesmol, α-murrolene and sphatulenol. Among these compounds, the amount of essential oils in non-irradiated sample were 77.13%, and the irradiated samples at doses of 1, 3, 5, 10 and 20 kGy were 84.98%, 83.70%, 83.94%, 82.84% and 82.58%, respectively. Oxygenated terpenes such as β-eudesmol, α-eudesmol, and verbenone were increased after irradiation but did not correlate with the irradiation dose. The yields of active substances such as essential oil were increased after irradiation; however, the yields of essential oils and the irradiation dose were not correlated. Thus, the profile of composition volatiles of A. gigas Nakai did not change with irradiation.

  4. Effects of gamma irradiation on the yields of volatile extracts of Angelica gigas Nakai

    International Nuclear Information System (INIS)

    The study was carried out to determine the effects of gamma irradiation on the volatile flavor components including essential oils, of Angelica gigas Nakai. The volatile organic compounds from non- and irradiated A. gigas Nakai at doses of 1, 3, 5, 10 and 20 kGy were extracted by a simultaneous steam distillation and extraction (SDE) method and identified by GC/MS analysis. A total of 116 compounds were identified and quantified from non- and irradiated A. gigas Nakai. The major volatile compounds were identified 2,4,6-trimethyl heptane, α-pinene, camphene, α-limonene, β-eudesmol, α-murrolene and sphatulenol. Among these compounds, the amount of essential oils in non-irradiated sample were 77.13%, and the irradiated samples at doses of 1, 3, 5, 10 and 20 kGy were 84.98%, 83.70%, 83.94%, 82.84% and 82.58%, respectively. Oxygenated terpenes such as β-eudesmol, α-eudesmol, and verbenone were increased after irradiation but did not correlate with the irradiation dose. The yields of active substances such as essential oil were increased after irradiation; however, the yields of essential oils and the irradiation dose were not correlated. Thus, the profile of composition volatiles of A. gigas Nakai did not change with irradiation

  5. Physicochemical characterization and toxicity of decursin and their derivatives from Angelica gigas.

    Science.gov (United States)

    Mahat, Bimit; Chae, Jung-Woo; Baek, In-Hwan; Song, Gyu-Yong; Song, Jin-Sook; Cho, Seong-Kwon; Kwon, Kwang-Il

    2012-01-01

    Angelica gigas NAKAI is used to treat dysmenorrhea, amenorrhea, menopause, abdominal pain, injuries, migraine, and arthritis. The present study provided a physicochemical and toxicological characterization of compounds in A. gigas NAKAI (decursin, decursinol angelate, diketone decursin, ether decursin, epoxide decursin and oxim decursin). Diketone decursin (173.16 μg/mL) and epoxide decursin (122.12 μg/mL) exhibited >100 μg/mL kinetic solubility after applying nephelometry, suggesting a highly soluble compound. The Student’s t-test revealed significant differences in the pKa ranges of the compounds by automatic titration from capillary electrophoresis (pautomatic titration analysis. A parallel artificial membrane permeability assay demonstrated permeability coefficients of <10 x 10⁻⁶ cm/s for all of the compounds, suggesting poor permeability. Ether decursin exhibited a toxic effect after being applied to mouse (NIH 3T3, EC₅₀: 57.9 μM) and human (HT-29, EC₅₀: 36.1 μM; Hep-G2, EC₅₀: 4.92 μM) cells. Additionally, epoxide and oxim decursin were toxic through acute oral toxicity (four and three deaths of Institute of Cancer Research (ICR) mice) and mutation toxicity testing by applying Salmonella typhimurium cells with and without S9. Although diketone decursin exhibited less permeability, it is potentially valuable pharmacological compound that should be investigated. PMID:22791156

  6. Antifungal Activity of Decursinol Angelate Isolated from Angelica gigas Roots Against Puccinia recondita

    Directory of Open Access Journals (Sweden)

    Mi-Young Yoon

    2011-04-01

    Full Text Available Rust causes significant losses in the yield and quality of various crops. The development of new effective and environmentally benign agents against the pathogen is of great interest. In the course of searching a natural antifungal compound from medicinal plants, we found that the methanol extract of Angelica gigas roots had a potent control efficacy against wheat leaf rust (WLR caused by Puccinia recondita. The antifungal substance was isolated from the methanol extract by silica gel column chromatography, alumina column chromatography and C18 preparative HPLC. It was identified as decursinol angelate by EI-MS and 1H-NMR data. In in vivo test, decursinol angelate effectively suppressed the development of WLR and red pepper anthracnose (RPA among the 6 plant diseases tested. In addition, the wettable powder-type formulation of ethyl acetate extract of A. gigas roots significantly suppressed the development of WLR. The crude extract containing decursinol angelate and the chemical appear to be a potential candidate for control of WLR. In addition, this is the first report on the in vivo antifungal activity of decursinol angelate against WLR as well as RPA

  7. Hybridization Between Natural Extract of Angelica gigas Nakai and Inorganic Nanomaterial of Layered Double Hydroxide via Reconstruction Reaction.

    Science.gov (United States)

    Kim, Tae-Hyun; Kim, Hyoung-Jun; Choi, Ae-Jin; Choi, Hyun-Jin; Oh, Jae-Min

    2016-01-01

    We have hybridized layered double hydroxide (LDH) with Angelica gigas Nakai root extract (AGNR) through reversible dehydration-rehydration reaction which is known as reconstruction. LDHs having well-ordered hydrotalcite-like crystal structure and average size 250 ± 20 nm were prepared by hydrothermal method. The root of Angelica gigas Nakai, which has been utilized in the treatment of female disorders as herbal medicine, was treated with methanol to obtain extract. Pristine LDHs were calcined at 400 °C for 8 hours to obtain layered double oxide (LDO), which was further dispersed into extract solution with various AGNR/LDO weight ratios, 0.11, 0.21 and 0.43. The extract content in each hybrid increased in proportion to initial AGNR/LDO ratio, showing the highest content of ~12%. The zeta potential of LDH shifted from +44 mV to +20 mV upon hybridization with extract, which was attributed to the adsorption of negatively charged organic moieties in AGNR on LDH surface. The scanning electron microscopic (SEM) results exhibited that the random stacking of LDH nanolayers resulted in LDH-AGNR hybrid with house-of-cards structure, of which inter-particle cavity serves nano-reservoir for natural extract. According to quantitative analyses, it was revealed that the content of active components in AGNR increased when they were hybridized with LDHs compared with those in AGNR alone. PMID:27398576

  8. Inhibition of platelet thromboxane formation and phosphoinositides breakdown by osthole from Angelica pubescens.

    Science.gov (United States)

    Ko, F N; Wu, T S; Liou, M J; Huang, T F; Teng, C M

    1989-11-24

    Osthole, isolated from Chinese herb Angelica pubescens, inhibited platelet aggregation and ATP release induced by ADP, arachidonic acid, PAF, collagen, ionophore A23187 and thrombin in washed rabbit platelets. It showed a weak activity in platelet-rich plasma. Osthole inhibited the thromboxane B2 formation caused by arachidonic acid, collagen, ionophore A23187 and thrombin in washed platelets, and also the thromboxane B2 formation caused by the incubation of lysed platelet homogenate with arachidonic acid. The generation of inositol phosphates in washed platelets caused by collagen, PAF and thrombin was suppressed by osthole. These data indicate that the inhibitory effect of osthole on platelet aggregation and release reaction was due to the inhibition of thromboxane formation and phosphoinositides breakdown. PMID:2556815

  9. Coumarins from Angelica decursiva inhibit α-glucosidase activity and protein tyrosine phosphatase 1B.

    Science.gov (United States)

    Ali, Md Yousof; Jannat, Susoma; Jung, Hyun Ah; Jeong, Hyong Oh; Chung, Hae Young; Choi, Jae Sue

    2016-05-25

    In the present study, we investigated the anti-diabetic potential of six natural coumarins, 4-hydroxy Pd-C-III (1), 4'-methoxy Pd-C-I (2), decursinol (3), decursidin (4), umbelliferone 6-carboxylic acid (5), and 2'-isopropyl psoralene (6) isolated from Angelica decursiva and evaluated their inhibitory activities against protein tyrosine phosphatase 1B (PTP1B), α-glucosidase, and ONOO(-)-mediated protein tyrosine nitration. Coumarins 1-6 showed potent PTP1B and α-glucosidase inhibitory activities with ranges of IC50 values of 5.39-58.90 μM and 65.29-172.10 μM, respectively. In the kinetic study for PTP1B enzyme inhibition, compounds 1, 5, and 6 were competitive, whereas 2 and 4 showed mixed type, and 3 displayed noncompetitive type inhibition. For α-glucosidase enzyme inhibition, compounds 1 and 3 exhibited good mixed-type, while 2, 5, and 6 showed noncompetitive and 4 displayed competitive type inhibition. Furthermore, these coumarins also effectively suppressed ONOO(-)-mediated tyrosine nitration in a dose-dependent manner. To further investigate PTP1B inhibition, we generated a 3D structure of PTP1B using Autodock 4.2 and simulated the binding of compounds 1-6. Docking simulations showed that different residues of PTP1B interacted with different functional groups of compounds 1-6 through hydrogen and hydrophobic interactions. In addition, the binding energies of compounds 1-6 were negative, suggesting that hydrogen bonding may stabilize the open form of the enzyme and potentiate tight binding of the active site of PTP1B, thereby resulting in more effective PTP1B inhibition. These results demonstrate that the whole plant of A. decursiva and its coumarins are useful as potential functional food ingredients for the prevention and treatment of type 2 diabetes. PMID:27085377

  10. Chalcones isolated from Angelica keiskei inhibit cysteine proteases of SARS-CoV.

    Science.gov (United States)

    Park, Ji-Young; Ko, Jin-A; Kim, Dae Wook; Kim, Young Min; Kwon, Hyung-Jun; Jeong, Hyung Jae; Kim, Cha Young; Park, Ki Hun; Lee, Woo Song; Ryu, Young Bae

    2016-01-01

    Two viral proteases of severe acute respiratory syndrome coronavirus (SARS-CoV), a chymotrypsin-like protease (3CL(pro)) and a papain-like protease (PL(pro)) are attractive targets for the development of anti-SARS drugs. In this study, nine alkylated chalcones (1-9) and four coumarins (10-13) were isolated from Angelica keiskei, and the inhibitory activities of these constituents against SARS-CoV proteases (3CL(pro) and PL(pro)) were determined (cell-free/based). Of the isolated alkylated chalcones, chalcone 6, containing the perhydroxyl group, exhibited the most potent 3CL(pro) and PL(pro) inhibitory activity with IC50 values of 11.4 and 1.2 µM. Our detailed protein-inhibitor mechanistic analysis of these species indicated that the chalcones exhibited competitive inhibition characteristics to the SARS-CoV 3CL(pro), whereas noncompetitive inhibition was observed with the SARS-CoV PL(pro). PMID:25683083

  11. Angelica sinensis induces hair regrowth via the inhibition of apoptosis signaling.

    Science.gov (United States)

    Kim, Mi Hye; Choi, You Yeon; Cho, Ik-Hyun; Hong, Jongki; Kim, Sung-Hoon; Yang, Woong Mo

    2014-01-01

    Hair loss is accompanied by keratinocyte apoptosis-regression during catagen and prolonged telogen. Angelica sinensis was reported to promote hair growth in vitro. Based on previous studies, we explored the hair growth effect and the mechanism of A. sinensis related to keratinocyte apoptosis-regression during catagen in mice. The 70% Ethanol extract of A. sinensis was applied topically at doses of 1 and 100 mg/mL to the dorsa of C57BL/6 mice for 2 weeks. The A. sinensis-treated group showed noticeable hair regrowth. Treatment with A. sinensis restored the lengths of hair shafts and size of hair follicles. In addition, mice treated with A. sinensis showed notably decreased apoptotic cells, along with a significant change in the expression of cleaved caspase-3 and the ratio of a pair of apoptosis-associated proteins: Bcl-2 and Bax. Also, A. sinensis inhibited the nuclear translocation of NF-κB, the phosphorylation of IκB-α, the phosphorylation of three mitogen-activated protein MAP kinases, and the activation of c-Jun with decreased TNF-α. These findings reveal a role of A. sinensis as an alternative treatment for hair loss that acts through hair cycle pathways associated with apoptosis regression during catagen. PMID:25004889

  12. Supplementation with Angelica keiskei inhibits expression of inflammatory mediators in the gastric mucosa of Helicobacter pylori-infected mice.

    Science.gov (United States)

    Kim, Aryoung; Lim, Joo Weon; Kim, Hoguen; Kim, Hyeyoung

    2016-05-01

    Oxidative stress is involved in the pathogenesis of Helicobacter pylori-associated gastric ulceration and carcinogenesis. The oxidant-sensitive transcription factor, nuclear factor κ-light-chain-enhancer of activated B cells (NF-κB), regulates expression of inflammatory mediators such as interferon γ (IFN-γ), cyclooxygenase 2 (COX-2), and inducible nitric oxide synthase (iNOS). These inflammatory mediators increased in gastric mucosal tissues from patients infected with H pylori. Angelica keiskei (AK), a green leafy vegetable, is rich in carotenoids and flavonoids and shows antioxidant and anti-inflammatory activities. Therefore, we hypothesized that AK may protect the gastric mucosa of H pylori-infected mice against inflammation. We determined lipid peroxide abundance, myeloperoxidase activity, expression levels of inflammatory mediators (IFN-γ, COX-2, and iNOS), NF-κB-DNA binding activity, and histologic changes in gastric mucosal tissues. The antioxidant N-acetylcysteine served as the positive control treatment. Supplementation with AK suppressed increases in lipid peroxide abundance, myeloperoxidase activity, induction of inflammatory mediators (IFN-γ, COX-2, and iNOS), activation of NF-κB, and degradation of nuclear factor of κ light polypeptide gene enhancer in B-cells inhibitor α in gastric mucosal tissue from H pylori-infected mice. Inhibition of H pylori-induced alterations by AK was similar to that by N-acetylcysteine. Taken together, these results suggest that supplementation with AK may prevent H pylori-induced gastric inflammation by inhibiting NF-κB-mediated induction of inflammatory mediators in the gastric mucosa of patients infected with H pylori. PMID:27101766

  13. Angelicae Dahuricae Radix Inhibits Dust Mite Extract-Induced Atopic Dermatitis-Like Skin Lesions in NC/Nga Mice

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    Hoyoung Lee

    2012-01-01

    Full Text Available We examined whether Angelicae Dahuricae Radix (AR suppresses the development of atopic dermatitis (AD-like skin lesions induced by Dermatophagoides farinae in NC/Nga mice. To investigate the effect of AR, we measured the AD severity score, measured plasma levels of IgE and histamine, and performed histological analysis in NC/Nga mice. We also confirmed the anti-inflammatory effects of AR by measuring TARC/CCL17 production from LPS-treated RAW 264.7 cells and mRNA levels of TARC and MDC/CCL22 in TNF-α/IFN-γ-treated HaCaT cells. 10 mg/day of AR extract was applied for 4 weeks to NC/Nga mice. Both the AR extract and 0.1% tacrolimus suppressed the development of AD-like skin lesions and reduced dermatitis scores of the back and ear skin. AR extracts caused an inhibition of histological changes induced by repeated application of D. farinae and a reduction of IgE and histamine levels in plasma (P<0.05. Furthermore, NO production in LPS-treated RAW 264.7 cells was diminished in a dose-dependent manner, and hTARC production and TARC and MDC mRNA levels in TNF-α/IFN-γ-treated HaCaT cells were diminished by AR. The inhibitory effect of AR on NO, TARC and MDC production may be associated with the suppression of AD-like skin lesions in D. farinae-induced NC/Nga mice.

  14. Herbal Extract SH003 Suppresses Tumor Growth and Metastasis of MDA-MB-231 Breast Cancer Cells by Inhibiting STAT3-IL-6 Signaling

    OpenAIRE

    Youn Kyung Choi; Sung-Gook Cho; Sang-Mi Woo; Yee Jin Yun; Sunju Park; Yong Cheol Shin; Seong-Gyu Ko

    2014-01-01

    Cancer inflammation promotes cancer progression, resulting in a high risk of cancer. Here, we demonstrate that our new herbal extract, SH003, suppresses both tumor growth and metastasis of MDA-MB-231 breast cancer cells via inhibiting STAT3-IL-6 signaling path. Our new herbal formula, SH003, mixed extract from Astragalus membranaceus, Angelica gigas, and Trichosanthes kirilowii Maximowicz, suppressed MDA-MB-231 tumor growth and lung metastasis in vivo and reduced the viability and metastatic ...

  15. Effects of Angelicae Gigantis Radix pharmacopuncture on Nitric Oxide and Prostaglandin E2 Production in Macrophage

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    You Jin Choi

    2011-09-01

    Full Text Available Objectives: Angelicae Gigantis Radix has been known traditional medicine with antimicrobial activities and it has been widely used for treatment of blood and inflammatory diseases. In the present study, some studies examined anti-inflammation effects of Angelicae Gigantis Radix but they usually were performed by ethanol extracted Angelicae Gigantis Radix pharmacopuncture. So We investigated the inhibitory effects of Angelicae Gigantis Radix pharmacopuncture by hot water and ethanol extract on Nitric oxide(NO and Prostaglandin E2(PGE2 production in lipopolysaccharide(LPS induced macrophage cell. Methods: Angelicae Gigantis Radix was extracted by ethanol and hot water. Cell viability was determined by MTT assay. To evaluate anti-inflammation effects of Angelicae Gigantis Radix pharmacopuncture, we examined NO and PGE2 production in LPS induced macrophages. The concentrations of NO and PGE2 were measured by Griess assay and Enzyme Immuno-Assay. Results: 1 The MTT assay demonstrated that cytotoxic effect of Angelicae Gigantis Radix pharmacopuncture by hot water extract and ethanol extract in RAW 264.7 macrophage cells were not appeared. 2 Angelicae Gigantis Radix pharmacopuncture by ethanol extract and hot water extract inhibited NO production in LPS induced macrophages significantly. 3 Angelicae Gigantis Radix pharmacopuncture by ethanol extract tended to inhibiting PGE2 production in LPS induced macrophages. And Angelicae Gigantis Radix pharmacopuncture by hot water extract inhibited LPS induced production of PGE2 in RAW 264.7 macrophage cells significantly. Conclusions: This study suggests that Angelicae Gigantis Radix pharmacopuncture may have an anti-inflammatory property through the inhibition of NO and PGE2 production in LPS induced macrophages. It may have a therapeutic potential for the treatment of various inflammatory diseases.

  16. Interferon-mediated antiviral activities of Angelica tenuissima Nakai and its active components.

    Science.gov (United States)

    Weeratunga, Prasanna; Uddin, Md Bashir; Kim, Myun Soo; Lee, Byeong-Hoon; Kim, Tae-Hwan; Yoon, Ji-Eun; Ma, Jin Yeul; Kim, Hongik; Lee, Jong-Soo

    2016-01-01

    Angelica tenuissima Nakai is a widely used commodity in traditional medicine. Nevertheless, no study has been conducted on the antiviral and immune-modulatory properties of an aqueous extract of Angelica tenuissima Nakai. In the present study, we evaluated the antiviral activities and the mechanism of action of an aqueous extract of Angelica tenuissima Nakai both in vitro and in vivo. In vitro, an effective dose of Angelica tenuissima Nakai markedly inhibited the replication of Influenza A virus (PR8), Vesicular stomatitis virus (VSV), Herpes simplex virus (HSV), Coxsackie virus, and Enterovirus (EV-71) on epithelial (HEK293T/HeLa) and immune (RAW264.7) cells. Such inhibition can be described by the induction of the antiviral state in cells by antiviral, IFNrelated gene induction and secretion of IFNs and pro-inflammatory cytokines. In vivo, Angelica tenuissima Nakai treated BALB/c mice displayed higher survivability and lower lung viral titers when challenged with lethal doses of highly pathogenic influenza A subtypes (H1N1, H5N2, H7N3, and H9N2). We also found that Angelica tenuissima Nakai can induce the secretion of IL-6, IFN-λ, and local IgA in bronchoalveolar lavage fluid (BALF) of Angelica tenuissima Nakai treated mice, which correlating with the observed prophylactic effects. In HPLC analysis, we found the presence of several compounds in the aqueous fraction and among them; we evaluated antiviral properties of ferulic acid. Therefore, an extract of Angelica tenuissima Nakai and its components, including ferulic acid, play roles as immunomodulators and may be potential candidates for novel anti-viral/anti-influenza agents. PMID:26727903

  17. GIGA Annual Report 2013

    OpenAIRE

    2014-01-01

    The GIGA German Institute of Global and Area Studies is an independent social-science research institute based in Hamburg. It analyses political, social and economic developments in Africa, Asia, Latin America and the Middle East and combines this analysis with innovative comparative research on international relations, development and globalisation, violence and security, and political systems. On the basis of this research, the GIGA advises political, economic and socia...

  18. Angelica Gets the Spirit Out: Improvisation, Epiphany and Transformation

    Science.gov (United States)

    Pignato, Joseph

    2013-01-01

    This article presents excerpts from a case study describing Angelica Dawson, a New York State music educator. Angelica makes improvisation a central part of her curricula in ways that transcend traditional offerings prevalent in American public schools. Qualitative research methods were used to document Angelica's work over the course of an…

  19. Herbal Extract SH003 Suppresses Tumor Growth and Metastasis of MDA-MB-231 Breast Cancer Cells by Inhibiting STAT3-IL-6 Signaling

    Directory of Open Access Journals (Sweden)

    Youn Kyung Choi

    2014-01-01

    Full Text Available Cancer inflammation promotes cancer progression, resulting in a high risk of cancer. Here, we demonstrate that our new herbal extract, SH003, suppresses both tumor growth and metastasis of MDA-MB-231 breast cancer cells via inhibiting STAT3-IL-6 signaling path. Our new herbal formula, SH003, mixed extract from Astragalus membranaceus, Angelica gigas, and Trichosanthes kirilowii Maximowicz, suppressed MDA-MB-231 tumor growth and lung metastasis in vivo and reduced the viability and metastatic abilities of MDA-MB-231 cells in vitro. Furthermore, SH003 inhibited STAT3 activation, which resulted in a reduction of IL-6 production. Therefore, we conclude that SH003 suppresses highly metastatic breast cancer growth and metastasis by inhibiting STAT3-IL-6 signaling path.

  20. Phenolic Compounds of Fresh Roots and Rhizomes of Garden Angelica Angelica Archangelica L.

    OpenAIRE

    R. M. BASHIROVA; А. G. MUSTAFIN1; E. G. GALKIN; F. F. ABDULLAEV

    2014-01-01

    Because in the process of drying and storage of plant materials is a change of genuine compounds, we studied the content of phenolic compounds in freshly drawn angelica roots and rhizomes of the drug Angelica archangelica L. samples had been taken on the territory of the Bashkir State University experimental plot a few days before soil freezing. Fresh rhizomes and roots were ground at room temperature and poured with 96% ethanol. The first portion of the extract containing the glycosides was ...

  1. Pharmacognostical and phytochemical evaluation of Angelica archangelica Linn

    OpenAIRE

    Dinesh Kumar; Zulfiqar Ali Bhat; Vijender Kumar; I. A. Chashoo; N A Khan; Shah, M Y

    2011-01-01

    Ethnopharmacological relevance: Angelica archangelica Linn. is a herb distributed in tropical and subtropical regions of the world. Angelica is largely used in grocery trade as well as for medicine. The herb is traditionally used for the treatment of leukoderma, nervous headaches, fever, skin rashes, wounds, rheumatism, toothaches, gastric ulcers, anorexia, migraine, bronchitis, chronic fatigue, menstrual and obstetric complaints and for dental preparation. Aim of the study: Evaluation of pre...

  2. [Studies of the active constituents of the Chinese drug "duhuo" Angelica pubescents].

    Science.gov (United States)

    Li, R Z; He, Y Q; Chiao, M; Xu, Y; Zhang, Q B; Meng, J R; Gu, Y; Ge, L P

    1989-01-01

    Eight coumarins isolated from the alcohol extract of the Chinese drug "Duhuo", the root of Angelica pubescents Maxim. f. biserrata Shan et Yuan (Umbelliferae) were elucidated to be columbianetin (I), columbianetin acetate (II), columbiadin (III), osthol (IV), isoimperatorin (V), bergapten (VI), xanthotoxin (VII), and columbianetin-beta-D-glucopyranoside (VIII), by chemical and spectral analysis, compound VIII was isolated from plant for the first time. All these coumarins were tested on platelet aggregation induced by 2 microns ADP. I, II, III, IV and VIII showed strong inhibiting activity against platelet aggregation. PMID:2618698

  3. In Vitro Neuroprotective Activities of Compounds from Angelica shikokiana Makino

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    Amira Mira

    2015-03-01

    Full Text Available Angelica shikokiana is widely marketed in Japan as a dietary food supplement. With a focus on neurodegenerative conditions such as Alzheimer’s disease, the aerial part was extracted and through bio-guided fractionation, fifteen compounds [α-glutinol, β-amyrin, kaempferol, luteolin, quercetin, kaempferol-3-O-glucoside, kaempferol-3-O-rutinoside, methyl chlorogenate, chlorogenic acid, hyuganin E, 5-(hydroxymethyl-2-furaldehyde, β-sitosterol-3-O-glucoside, adenosine (isolated for the first time from A. shikokiana, isoepoxypteryxin and isopteryxin] were isolated. Isolated compounds were evaluated for in vitro neuroprotection using acetylcholine esterase inhibitory, protection against hydrogen peroxide and amyloid β peptide (Aβ25-35-induced neurotoxicity in neuro-2A cells, scavenging of hydroxyl radicals and intracellular reactive oxygen species and thioflavin T assays. Quercetin showed the strongest AChE inhibition (IC50 value = 35.5 µM through binding to His-440 and Tyr-70 residues at the catalytic and anionic sites of acetylcholine esterase, respectively. Chlorogenic acid, its methyl ester, quercetin and luteolin could significantly protect neuro-2A cells against H2O2-induced neurotoxicity and scavenge hydroxyl radical and intracellular reactive oxygen species. Kaempferol-3-O-rutinoiside, hyuganin E and isoepoxypteryxin significantly decreased Aβ25-35-induced neurotoxicity and Th-T fluorescence. To the best of our knowledge, this is the first report about neuroprotection of hyuganin E and isoepoxypteryxin against Aβ25-35-induced neurotoxicity.

  4. Identification and Comparative Quantification of Bio-Active Phthalides in Essential Oils from Si-Wu-Tang, Fo-Shou-San, Radix Angelica and Rhizoma Chuanxiong

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    Yin Lu

    2010-01-01

    Full Text Available Phthalides are important bio-active constituents in Si-Wu-Tang and Fo-Shou-San, two commonly used Traditional Chinese Medicine (TCM combined prescriptions mainly derived from Radix Angelica and Rhizoma Chuanxiong. In this paper, the contents of eight phthalides, including Z-ligustilide, E-ligustilide, Z-butylenephthalide, E-butylene-phthalide, 3-butylphthalide, neocnidilide and senkyunolide A were determined or estimated by gas chromatography–mass spectrometry (GC-MS. The results showed GC-MS was a simple, rapid, and high sensitive method for analyzing phthalides in Si-Wu-Tang, Fo-Shou-San, Radix Angelica and Rhizoma Chuanxiong, and the extractable contents of each phthalides including Z-ligustilide, E-ligustilide, Z-butylenephthalide, etc. varied after Radix Angelica, Rhizoma Chuanxiong were combined into a formulation, such as Si-Wu-Tang and Fo-Shou-San. Furthermore, inhibition activity of essential oils from Si-Wu-Tang, Fo-Shou-San, Radix Angelica and Rhizoma Chuanxiong on uterine contraction was tested in an in vitro assay, and the results showed that the activity of the essential oil is higher as the content of the phthalides increase, which demonstrated that phthalides are possibly main active components inhibiting mice uterine contraction in vitro. All of the results suggested that comparative analysis of chemical components and pharmacological activities of each herb and formula is possibly helpful to elucidate the active components in traditional Chinese medicine, and to reveal the compatibility mechanism of TCM formulae.

  5. Pacific cupped oyster - Crassostrea gigas

    OpenAIRE

    Lapegue, Sylvie; Boudry, Pierre; Goulletquer, Philippe

    2006-01-01

    Originating from the north eastern Asia, Crassostrea gigas is endemic to Japan, but has been introduced and translocated, mainly for aquaculture purpose, into several countries, almost worldwide (1). In North America, the species can be found from Southeast Alaska to Baja California, while in European waters the species is cultured from Norway to Portugal as well as in Mediterranean Sea (Fig.1) (2). Biological characteristics make it suitable for a wide range of environmental conditions, alth...

  6. [Experiment on polyploid induction of Angelica dahurica var. formosana].

    Science.gov (United States)

    Peng, F; Zhou, R; Liu, J

    1999-12-01

    Colchicine solution was applied to the primary adventitious buds of Angelica dahurica var. formosana in vitro to induce the polyploid. Compared with non-treated plantlet, the morphology, microhisology, and chromosome number of treated plantlets are varied. It proved that the polyploid induction was effective. PMID:12571900

  7. Phenolic Compounds of Fresh Roots and Rhizomes of Garden Angelica Angelica Archangelica L.

    Directory of Open Access Journals (Sweden)

    R. M. BASHIROVA

    2014-06-01

    Full Text Available Because in the process of drying and storage of plant materials is a change of genuine compounds, we studied the content of phenolic compounds in freshly drawn angelica roots and rhizomes of the drug Angelica archangelica L. samples had been taken on the territory of the Bashkir State University experimental plot a few days before soil freezing. Fresh rhizomes and roots were ground at room temperature and poured with 96% ethanol. The first portion of the extract containing the glycosides was kept at +5 ° C to precipitate the polysaccharides, and the residual plant material was extracted repeatedly during the day of 96% ethanol to isolate coumarins.After two hours, the first portion of the extract containing glycosides was frozen in a refrigerator, and the remaining part was re-extracted by 96% ethanol for coumarin isolation next day. The second portion representing 80% of the ethanol extract was evaporated to a "tar" state under vacuum at room temperature. Then it was dissolved in CHCl3 and placed in the refrigerator. After a day of keeping the chloroform extract at -10°C, its separation into two fractions was observed: a yellow-orange top and a poor-colored bottom.After separation a gas chromatography-mass spectrometer Thermo Finnigan, 800-Finnigan chromatograph and mass spectrometer of high resolution MAT-95XP "Delta" with “Data System” processing were used.In the alcohol fraction (50% 6.45% there were found catechol, methylcatechol 0.61%, 4.23% 2-methoxy-4-vinylphenol, xanthyletine 0.78%, 4.21% osthol, 10.47% 2,2-dimethyl-3,4-dihydro-2H,5H-pyrano[2,3-b]chromen-5-one, 1.35% kvannin, isoangenomalin 0.37%, 0.8% psoralen and 1.32% prangenin.In the colored fractions 0.41 % bergaptol, 0.41 % marmesin, 0.20 % oroselonе, and 0.07 % neobyakangelikol have been found. High levels of ethyl α-D-glucopyranoside amounting to 35 % were observed in this fraction as well. furocoumarin glycosides are entirely possible to be hydrolysed during the

  8. Anti-diabetic and anti-Alzheimer's disease activities of Angelica decursiva.

    Science.gov (United States)

    Yousof Ali, Md; Jung, Hyun Ah; Choi, Jae Sue

    2015-12-01

    Diabetes mellitus (DM) and Alzheimer's disease (AD) constitute two global health issues. DM is an ever-increasing epidemic affecting millions of elderly people worldwide, causing major repercussions on patients' daily lives, mostly due to chronic complications. Complications from DM can affect the brain, thereby characterizing DM as a risk factor for AD. In the present study, we examined the inhibitory activity of methanol extracts of different parts of 12 Angelica species against α-glucosidase, protein tyrosine phosphatase 1B (PTP1B), acetylcholinesterase (AChE), and butyrylcholinesterase (BChE). The methanol extract of Angelica decursiva exhibited the highest inhibitory activities against α-glucosidase, PTP1B, AChE, and BChE and so was selected for further investigation. Repeated column chromatography based on bioactivity-guided fractionation yielded seven compounds (1-7). Among these compounds, nodakenin (1), nodakenetin (2), umbelliferone (3), cis-3'-acetyl-4'-angeloylkhellactone (4), 3'(R)-O-acetyl-4'(S)-O-tigloylkhellactone (5), isorutarine (6), and para-hydroxybenzoic acid (7) exhibited potent inhibitory activities against α-glucosidase, PTP1B, rat lens aldose reductase (RLAR), AChE, BChE, and β-site amyloid precursor protein cleaving enzyme 1 (BACE1). Our results clearly indicate the potential inhibition of α-glucosidase, PTP1B, RLAR, AChE, BChE, and BACE1 by A. decursiva as well as its isolated constituents, which could be further explored to develop therapeutic modalities for the treatment of DM and AD. PMID:26152875

  9. EGFR/cell membrane chromatography-online-high performance liquid chromatography/mass spectrometry method for screening EGFR antagonists from Radix Angelicae Pubescentis

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The intracellular kinase domains of the epidermal growth factor receptor(EGFR) in some tumor cells are significant targets for drug discovery.We have developed a new EGFR cell membrane chromatography(EGFR/CMC)-online-high performance liquid chromatography/mass spectrometry(HPLC/MS) method for screening anti-EGFR antagonists from medicinal herbs such as Radix Angelicae Pubescentis.In this study,the HEK293 EGFR cells with high expression of EGFR were used to prepare cell membrane stationary phase(CMSP) in the EGFR/CMC model.The retention fractions on the EGFR/CMC model were directly analyzed by combining a 10 port columns switcher with a HPLC/MS system online.As a result,osthole from Radix Angelicae Pubescentis was found to be the active component acting on EGFR like dasatinib as the control drug.There was a good relationship between their inhibiting effects on EGFR secretion and HEK293 EGFR cell growth in vitro.This new EGFR/CMC-online-HPLC/MS method can be applied for screening anti-EGFR antagonists from TCMs,for instance,Radix Angelicae Pubescentis.It will be a useful method for drug discovery with natural medicinal herbs as a leading compound resource.

  10. Coniferyl Ferulate, a Strong Inhibitor of Glutathione S-Transferase Isolated from Radix Angelicae sinensis, Reverses Multidrug Resistance and Downregulates P-Glycoprotein

    Directory of Open Access Journals (Sweden)

    Chang Chen

    2013-01-01

    Full Text Available Glutathione S-transferase (GST is the key enzyme in multidrug resistance (MDR of tumour. Inhibition of the expression or activity of GST has emerged as a promising therapeutic strategy for the reversal of MDR. Coniferyl ferulate (CF, isolated from the root of Angelica sinensis (Oliv. Diels (Radix Angelicae sinensis, RAS, showed strong inhibition of human placental GST. Its 50% inhibition concentration (IC50 was 0.3 μM, which was greater than a known GSTP1-1 inhibitor, ethacrynic acid (EA, using the established high-throughput screening model. Kinetic analysis and computational docking were used to examine the mechanism of GST inhibition by CF. Computational docking found that CF could be fully docked into the gorge of GSTP1-1. The further exploration of the mechanisms showed that CF was a reversible noncompetitive inhibitor with respect to GSH and CDNB, and it has much less cytotoxicity. Apoptosis and the expression of P-gp mRNA were evaluated in the MDR positive B-MD-C1 (ADR+/+ cell line to investigate the MDR reversal effect of CF. Moreover, CF showed strong apoptogenic activity and could markedly decrease the overexpressed P-gp. The results demonstrated that CF could inhibit GST activity in a concentration-dependent manner and showed a potential MDR reversal effect for antitumour adjuvant therapy.

  11. Pyranocoumarin Tissue Distribution, Plasma Metabolome and Prostate Transcriptome Impacts of Sub-Chronic Exposure to Korean Angelica Supplement in Mice.

    Science.gov (United States)

    Zhang, Jinhui; Li, Li; Tang, Suni; Zhang, Yong; Markiewski, Maciej; Xing, Chengguo; Jiang, Cheng; Lü, Junxuan

    2016-04-01

    Herbal products containing Korean Angelica gigas Nakai (AGN) root extract are marketed as dietary supplements for memory enhancement, pain killing, and female menopausal symptom relief. We have shown the anticancer activities of AGN supplements in mouse models. To facilitate human anticancer translational research, we characterized the tissue distribution of AGN marker pyranocoumarin compounds decursin (D) and decursinol angelate (DA) ([Formula: see text]% in AGN) and their metabolite decursinol (DOH), assessed the safety of sub-chronic AGN dietary exposure in mice, and explored its impact on plasma aqueous metabolites and the prostate transcriptome. The data show that after a gavage dose, plasma contained readily detectable DOH, but little D and DA, mirroring patterns in the liver. Extra-hepatic tissues retained greater levels of DA and D than the liver did. For sub-chronic exposures, male mice were provided ad libitum AIN93M-pellet diets with 0.5 and 1% AGN for six weeks. No adverse effects were observed on the plasma biochemistry markers of liver and kidney integrity in spite of their enlargement. Histopathological examinations of the liver, kidney and other visceral organs did not reveal tissue abnormalities. Metabolomic assessment of plasma from mice fed the 1%-AGN diet suggested metabolic shifts of key amino acids especially in the methionine-cysteine cycle, purine cycle, and glycolysis-citrate cycle. Prostate transcriptomic profiling identified gene signature changes in the metabolisms of drugs, lipids and cellular energetics, neuro-muscular features, immunity and inflammation, and tumor suppressor/oncogene balance. The safety profile was corroborated with a daily [Formula: see text] injection of AGN extract (100-300[Formula: see text]mg/kg) for four weeks, which resulted in much greater systemic pyranocoumarin exposure than the dietary route did. PMID:27080944

  12. Preparation of Blood-Deficient Model and Research of Angelica Polysaccharide on Enriching Blood in Chickens

    OpenAIRE

    Wanyu Shi; Yongzhan Bao; Haifeng Hou; Qian Li

    2012-01-01

    In this study cyclophosphamide was used to prepare the blood-deficient model. The red blood cell count and hemoglobin content were measured. The experimental chickens presented the symptoms of blood-deficient syndrome, dullness, shrinkinginto oneself, broken winded, loose feather, waxy eyelid, and pale tongue. At the same time, red blood cell count and hemoglobin content decreased significantly. Angelica polysaccharide as the effective component of Angelica Sinensis could significantly increa...

  13. Evaluation of acute skin irritation and phototoxicity by aqueous and ethanol fractions of Angelica keiskei

    OpenAIRE

    Lee, Sang-Han

    2012-01-01

    In this study, to assess whether aqueous and ethanol fractions of Angelica keiskei induce acute skin irritation and phototoxicity, acute skin irritancy and phototoxicity tests were performed. The skin of rabbits or guinea pigs was treated with these fractions (100 mg/dose) and whether the animals sustained significant skin damage was determined. The data demonstrated that the aqueous and ethanol fractions of Angelica keiskei did not induce acute toxicity in the skin of the animals, as assesse...

  14. The Pacific Oyster (Crassostrea gigas) in the Isefjord, Denmark

    OpenAIRE

    Wang, Jing; Chrisoffersen, Kenn; Buck, Sine; Tao, Ying

    2007-01-01

    The Pacific Oyster (Crassostrea gigas) is one of the alien species that were introduced and cultured in Europe. Researches show that C. gigas has reached a high density in the Limfjord as oyster reefs in recent years. Since 1986, several attempts for cultivations of C. gigas had been done in the Isefjord, and stopped in 1998. Till now, there is no previously specific study on C. gigas done in that area. In order to investigate the density of pacific oysters in the Isefjord, and to estimate wh...

  15. Electroweak Precision Tests with GigaZ

    CERN Document Server

    Heinemeyer, S

    2000-01-01

    By running the prospective high-energy e^+e^- collider TESLA in the GigaZ mode on the Z resonance, experiments can be performed on the basis of more than 10^9 Z events. This will allow the measurement of the effective electroweak mixing angle to an accuracy of \\delta sin^2(theta_W,eff) \\approx \\pm 10^-5. The W boson mass is likewise expected to be measurable with an error of \\delta M_W \\approx \\pm 6 MeV near the W^+W^ threshold. We review the electroweak precision tests that can be performed with these high precision measurements within the Standard Model (SM) and its minimal Supersymmetric extension (MSSM). The complementarity of direct measurements at a prospective linear e^+e^- collider and indirect constraints following from measurements performed at GigaZ is emphasized.

  16. Bioactivity-Guided Fractionation and GC/MS Fingerprinting of Angelica sinensis and Angelica archangelica Root Components for Antifungal and Mosquito Deterrent Activity

    Science.gov (United States)

    Angelica sinensis and A. archangelica belong to the Umbelliferae and both are used in traditional Chinese medicine to treat gynecological and intestinal disorders. In this study, oils from three different A. sinensis collections and one A. archangelica root were analyzed by GC and GC/MS. The domin...

  17. Evaluation of Antioxidation and Whitening Activities for Combination of Aloe vera and Angelica dahurica Extracts%芦荟、白芷提取物联合应用的抗氧化和美白活性评估

    Institute of Scientific and Technical Information of China (English)

    黄立森; 张瞳昕; 庞海月; 吴黉坦; 叶子坚; 王贵弘

    2016-01-01

    为评估芦荟和白芷的乙醇提取物联合应用在抗氧化和美白方面的协同增效作用,采用乙醇浸提法从芦荟和白芷中提取分离功效成分,应用DPPH和ABTS方法评估其抗氧化活性,酪氨酸酶活性抑制实验评估其美白活性。结果表明,芦荟和白芷提取物联合应用比单独应用具有更强的抗氧化、清除DPPH自由基和抑制酪氨酸酶活性。芦荟和白芷提取物联合应用在抗氧化和美白方面具有协同增效作用。%To evaluate the synergetic effect of antioxidation and whitening activities for combination of Aloe vera and Angelica dahurica extracts,the active ingredients from Aloe vera and Angelica dahurica were separated by an ethanol ex-traction method. The antioxidant activity was evaluated by DPPH and ABTS methods. And the whitening activity was test-ed by using a tyrosinase inhibition experiment. Results showed that,the combination of Aloe vera and Angelica dahurica extracts had stronger antioxidant activity than the individual,as well as in the aspect of DPPH free radical scavenging and inhibiting tyrosinase activities. It has significant synergetic effect of antioxidation and whitening activities for combination of Aloe vera and Angelica dahurica extracts.

  18. EFFECT OF ANGELICA SINENSIS ON AFFERENT DISCHARGE OF SINGLE MUSCLE SPINDLE IN TOADS

    Institute of Scientific and Technical Information of China (English)

    高云芳; 樊小力

    2004-01-01

    Objective In drugs for invigorating blood circulation, to find a herb that can stimulate afferent discharge of muscle spindle. Methods A single muscle spindle was isolated from sartorial muscle of toad. Using air-gap technique, afferent discharge of the muscle spindle was recorded. Effects of Angelica Sinensis, Salvia Miltiorrhiza, and Safflower on afferent discharge of the muscle spindle were observed. Results Angelica Sinensis could distinctly increase afferent discharge frequency of the muscle spindle, and this increase was dose-dependent. But Salvia Miltiorrhiza and Safflower had no this excitatory effect. Conclusion It is known that Angelica Sinensis can invigorate blood circulation, and we have found its excitatory effect on muscle spindle which makes it possible to serve people with muscle atrophy if more evidences from clinical experiments are available.

  19. Neuroprotective and Cytotoxic Phthalides from Angelicae Sinensis Radix

    Directory of Open Access Journals (Sweden)

    Wenxia Gong

    2016-04-01

    Full Text Available Seven phthalides, including a new dimeric one named tokinolide C (7, were isolated from Angelicae Sinensis Radix and characterized. The structures of these compounds were elucidated on the basis of comprehensive analysis of spectroscopic data and comparison with literature data. All of the compounds were evaluated for their cytotoxic activities against the A549, HCT-8, and HepG2 cancer cell lines. Riligustilide (4 showed cytotoxicity against three cancer cell lines, with IC50 values of 13.82, 6.79, and 7.92 μM, respectively. Tokinolide A (6 and tokinolide C (6 exerted low cytotoxicity in these cancer cell lines, while the remaining compounds were inactive. Flow cytometry analysis was employed to evaluate the possible mechanism of cytotoxic action of riligustilide (4. We observed that compound 4 was able to arrest the cell cycle in the G1, S phases and induce apoptosis in a time-dependent manner in HCT-8 cell lines. In addition, these compounds were evaluated for neuroprotective effect against SH-SY5Y cells injured by glutamate. The result showed that ligustilide (1, Z-butylidenephthalide (3 and tokinolide A (6 exhibited significant neuroprotective effects.

  20. Neuroprotective and Cytotoxic Phthalides from Angelicae Sinensis Radix.

    Science.gov (United States)

    Gong, Wenxia; Zhou, Yuzhi; Li, Xiao; Gao, Xiaoxia; Tian, Junsheng; Qin, Xuemei; Du, Guanhua

    2016-01-01

    Seven phthalides, including a new dimeric one named tokinolide C (7), were isolated from Angelicae Sinensis Radix and characterized. The structures of these compounds were elucidated on the basis of comprehensive analysis of spectroscopic data and comparison with literature data. All of the compounds were evaluated for their cytotoxic activities against the A549, HCT-8, and HepG2 cancer cell lines. Riligustilide (4) showed cytotoxicity against three cancer cell lines, with IC50 values of 13.82, 6.79, and 7.92 μM, respectively. Tokinolide A (6) and tokinolide C (6) exerted low cytotoxicity in these cancer cell lines, while the remaining compounds were inactive. Flow cytometry analysis was employed to evaluate the possible mechanism of cytotoxic action of riligustilide (4). We observed that compound 4 was able to arrest the cell cycle in the G1, S phases and induce apoptosis in a time-dependent manner in HCT-8 cell lines. In addition, these compounds were evaluated for neuroprotective effect against SH-SY5Y cells injured by glutamate. The result showed that ligustilide (1), Z-butylidenephthalide (3) and tokinolide A (6) exhibited significant neuroprotective effects. PMID:27128890

  1. Systems Harmonization and Convergence - the GIGAS Approach

    Science.gov (United States)

    Marchetti, P. G.; Biancalana, A.; Coene, Y.; Uslander, T.

    2009-04-01

    0.1 Background The GIGAS1 Support Action promotes the coherent and interoperable development of the GMES, INSPIRE and GEOSS initiatives through their concerted adoption of standards, protocols, and open architectures. 0.2 Preparing for Coordinated Data Access The GMES Coordinated Data Access System is under design and implementation2. This objective has motivated the definition of the interoperability standards between the contributing missions. The following elements have been addressed with associated papers submitted to OGC: The EO Product Metadata has been based on the OGC Geographic Markup Language, addressing sensor characteristics for optical, radar and atmospheric products. Collection and service discovery: an ISO extension package for CSW ebRim has been proposed. Catalogue Service (CSW): an Earth Observation extension package of the CSW ebRim has been proposed. Feasibility Analysis and Order: an Order interface control document and an Earth Observation profile of the Sensor Planning Service have been proposed. Online Data Access: an Earth Observation profile of the Web Map Services (WMS) for visualization and evaluation purposes has been proposed. Identity (user) management: the objective in the long term is to allow for a single sign-on to the Coordinated Data Access system by users registered in the various Earth Observation ground segments by providing a federated identity across participating ground segments, exploiting OASIS standards. 0.3 The GIGAS proposed harmonization approach The approach proposed by GIGAS is based on three elements: Technology watch Comparative analysis Shaping of initiatives and standards This paper concentrates on the methodology for technology watch and comparative analysis. The complexity of the GIGAS scenario involving huge systems (i.e. GEOSS, INSPIRE, GMES etc.) entails the interaction with different heterogeneous partners, each with a specific competence, expertise and know-how. 0.3.1 Technology watch The methodology

  2. The NA62 GigaTracker

    CERN Document Server

    Perrin-Terrin, Mathieu

    2015-01-01

    The GigaTracker is an hybrid silicon pixel detector built for the NA62 experiment aiming at measuring the branching fraction of the ultra-rare kaon decay K + ! p + n ̄ n at the CERN SPS. The detector has to track particles in a beam with a flux reaching 1.3 MHz/mm 2 and provide single-hit timing with 200ps RMS resolution for a total material budget of less than 1.5 X 0 . The tracker comprises three 60.8mm 27mm stations installed in vacuum ( 10 ...

  3. Effect of Bovine Plasma Protein on Autolysis and Gelation of Protein Extracted from Giant Squid (Dosidicus gigas) Mantle

    OpenAIRE

    Laura Raquel Marquez-Alvarez; Wilfrido Torres-Arreola; Victor Manuel Ocano-Higuera; Benjamin Ramirez-Wong; Enrique Marquez-Rios

    2015-01-01

    The effect of bovine plasma protein (BPP) on the inhibition of autolytic activity and its effect on the gelling properties of a protein concentrate (PC) obtained from jumbo squid (Dosidicus gigas) mantle were investigated. Sols and gels were prepared from the PC by adding different amounts of BPP (0, 1, and 2%). Dynamic oscillatory measurements indicated that systems with 1% BPP had a higher elastic modulus (G′), in which hydrophobic interactions were favored. Concerning the technological and...

  4. The relaxant action of osthole isolated from Angelica pubescens in guinea-pig trachea.

    Science.gov (United States)

    Teng, C M; Lin, C H; Ko, F N; Wu, T S; Huang, T F

    1994-02-01

    The effect of osthole, isolated from Angelica pubescens, on the contraction of guinea-pig trachea was studied. Osthole (25-100 mumol/l), theophylline (10-1000 mumol/l) and higher concentrations of nifedipine (0.1-100 mumol/l) suppressed the contraction response curves of tracheal smooth muscle caused by carbachol, prostaglandin F2 alpha (PGF2 alpha), U46619 (thromboxane A2 analogue) and leukotriene C4 (LTC4) in a concentration-dependent manner. The contraction caused by high K+ (120 mmol/l) and cumulative concentrations of CaCl2 (0.03-3 mmol/l) was also inhibited concentration-dependently by osthole (25-100 mumol/l), theophylline (10-1000 mumol/l) and lower concentrations of nifedipine (0.01-0.1 mumol/l). The relaxant actions of osthole were not affected by propranolol (1 mumol/l), glibenclamide (10 mumol/l) or removal of tracheal epithelium. Osthole (100 mumol/l) was still effective in causing tracheal relaxation in the presence of nifedipine (1 mumol/l). In Ca(2+)-free- and EGTA (0.2 mmol/l)-containing medium, the relaxing effect of osthole was more potent than in normal Krebs solution. Osthole (25 and 50 mumol/l) caused 2.9 and 6.5, or 3.0 and 5.6 fold, respectively, increase in potency of forskolin or sodium nitroprusside in causing tracheal relaxation but did not affect that by cromakalim. Osthole (50 mumol/l) enhanced the increase in tissue cAMP and cGMP levels induced by forskolin and sodium nitroprusside, respectively, and in higher concentrations (100 and 250 mumol/l), itself increased markedly tissue cAMP and cGMP contents. Osthole (10-250 mol/l) inhibited the activity of cAMP and cGMP phosphodiesterases in a concentration-dependent manner. It is concluded that osthole exerts a non-specific relaxant effect on the trachealis by inhibiting the cAMP and cGMP phosphodiesterases. PMID:8170504

  5. Chemical and biological assessment of Angelica herbal decoction: comparison of different preparations during historical applications.

    Science.gov (United States)

    Zhang, Wendy Li; Zheng, Ken Yu-Zhong; Zhu, Kevin Yue; Zhan, Janis Ya-Xian; Bi, Cathy Wen-Chuan; Chen, Jian-Ping; Du, Crystal Ying-Qing; Zhao, Kui-Jun; Lau, David Tai-Wai; Dong, Tina Ting-Xia; Tsim, Karl Wah-Keung

    2012-08-15

    The commonly used Angelica herbal decoction today is Danggui Buxue Tang (DBT), which is a dietary supplement in treating menopausal irregularity in women, i.e. to nourish "Qi" and to enrich "Blood". According to historical record, many herbal decoctions were also named DBT, but the most popular formulation of DBT was written in Jin dynasty (1247 AD) of China, which contained Astragali Radix (AR) and Angelicae Sinensis Radix (ASR) with a weight ratio of 5:1. However, at least two other Angelica herbal decoctions recorded as DBT were prescribed in Song (1155 AD) and Qing dynasties (1687 AD). Although AR and ASR are still the major components in the DBT herbal decoctions, they are slightly varied in the herb composition. In order to reveal the efficiency of different Angelica herbal decoctions, the chemical and biological properties of three DBT herbal extracts were compared. Significantly, the highest amounts of AR-derived astragaloside III, astragaloside IV, calycosin and formononetin and ASR-derived ferulic acid were found in DBT described in 1247 AD: this preparation showed stronger activities in osteogenic, estrogenic and erythropoetic effects than the other two DBT. The current results supported the difference of three DBT in chemical and biological properties, which could be a result of different herbal combinations. For the first time, this study supports the popularity of DBT described in 1247 AD. PMID:22902230

  6. Insecticidal effect of furanocoumarins from fruits of Angelica archangelica L. against larvae Spodoptera littoralis Boisd

    Czech Academy of Sciences Publication Activity Database

    Pavela, R.; Vrchotová, Naděžda

    2013-01-01

    Roč. 43, MAY 2013 (2013), s. 33-39. ISSN 0926-6690 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Keywords : Angelica archangelica * furanocoumarins * essential oils * plant extracts * spodoptera littoralis * botanical insecticides * insecticidal activity Subject RIV: EH - Ecology, Behaviour Impact factor: 3.208, year: 2013

  7. The main chemical composition of irradiated tuber of elevated gastrodia and Chinese Angelica

    International Nuclear Information System (INIS)

    This article studies the changes of the main chemicl composition of the Chinese drugs Gastradia Elata BL and Angelica Sinensis (Oliv) which were irradiated by 60Co γ-ray and stored for half an year. The content of the main chemical composition gastrodin of Gastradia Elata BL was measured by thin-layer chromatography and gas chromatography and the main chemical compsition Ligustilide of the essential oils of Chinese Angelica was also measured. The result shows that the contents of the main chemial composition gastrodin of irradiation groups and control groups are almost the same. The content of the main chemical compostion Ligustilide of the irradiated Chinese Angelica is close to the content of the control (not irradiated). There is no remarkable difference after the data were treated statistically (P > 0.05). The thin-layer chromatography colour-maculates were almost the same with the same Rf exponent. Irradiation of the tuber of elevated gastrodia and Chinese Angelica with 6 x 103 Gy of 60Co γ-rays and with subsequent storage of half an year will not change the effective composition of the drugs

  8. Selective effects of the extract from Angelica archangelica L. against Harmonia axyridis (Pallas)—An important predator of aphids

    Czech Academy of Sciences Publication Activity Database

    Pavela, R.; Žabka, M.; Vrchotová, Naděžda; Tříska, Jan; Kazda, J.

    2013-01-01

    Roč. 51, NOV 2013 (2013), s. 87-92. ISSN 0926-6690 Institutional support: RVO:67179843 Keywords : Angelica archangelica * Harmonia axyridis * furanocoumarins * botanical insecticides * aphids Subject RIV: EH - Ecology, Behaviour Impact factor: 3.208, year: 2013

  9. Effect of Angelica sinensis on neural stem cell proliferation in neonatal rats following intrauterine hypoxia

    Institute of Scientific and Technical Information of China (English)

    Hesheng Yue; Xudong Chen; Xiaoming Zhong; Hong Yu

    2008-01-01

    BACKGROUND:Angelica sinensis is a widely used herb in Chinese traditional medicine.It has been shown to improve hypoxia in embryonic rats and reduce nestin expression in neural stem cells,resulting in proliferation of neural stem cells.OBJECTIVE:To study the protective effect of Angelica on neural stem cell proliferation in neonatal rats after intrauterine hypoxia.DESIGN,TIME AND SETTING:The randomized,controlled,experiment was performed at the Department of Histology and Embryology,Luzhou Medical College,China from July 2007 to January 2008.MATERIALS:Because gestational days 14-15 are a key stage in rat nervous system development,21 healthy,pregnant Sprague Dawley rats(14 days after conception)were used for this study.Nestin monoclonal primary antibody was obtained from Chemicon,USA.Angelica parenteral solution(250 g/L)was obtained from Pharmaceutical Preparation Section,Second Affiliated Hospital of Wuhan University,China.METHODS:Rats were randomly divided into a control group(n=5),a hypoxia group(n=8),and an Angelica group(n=8).Saline(8 mL/kg)was injected into the caudal vein of rats in the hypoxia group once a day for seven consecutive days.Intrauterine hypotonic hypoxia was induced using 13% O2 for two hours per day on three consecutive days.Rats in the Angelica group received injections of Angelica parenteral solution(250 g/L);all other protocols were the same as the hypoxia group.The control group procedures were identical to the hypoxia group,but under normal,non-hypoxic conditions.After birth,brain tissues were immediately obtained from neonatal rats and prepared for nestin immunohistochemistry.MAIN OUTCOME MEASURES:Nestin-positive cells in hippocampal CA3 area of neonatal rats in each group were quantified using image analysis to detect signal absorbance.RESULTS:The number of nestin-positive cells increased in the hippocampal CA3 area of neonatal rats in the hypoxia group.The number of nestin-positive cells was less in the Angelica group than in the

  10. Occurrence of fungal diseases on angelica (Archangelica officinalis Hoffm. in the region of Małopolska

    Directory of Open Access Journals (Sweden)

    Stanisław Mazur

    2012-12-01

    Full Text Available The field experiment on angelica (Archangelica officinalis Hoffm. was carried out in the years 2001-2002 at the plantations situated in Małopolska (Mydlniki near Kraków and Królówka near Bochnia. The results of two years' investigations pointed out, that angelica plants during vegetation were infested by many pathogens. The most often noticed on the plants were angelica rust (Puccinia anglicae, powdery mildew (Erysiphe umbelliferarum and Cercospora leaf spot (Cercospora sp.. Moreover, many various types of disease symptoms, which were described and made a diagnosis. There were mainly spots on leaves and steams, from which there were isolated most often fungi from Alternaria genus. The investigations on the salubrity of the seed material (angelica fruits coming from different sources showed that fungi from genus Alternaria were likely to transfer by seeds and caused disease symptoms on plants during vegetation. Fungi from genus Alternaria were most often isolated from angelica fruits. Saprotrophic fungi (Epicoccum purpurascens, Penicillium spp., Mucor hiemalis were also often isolated from angelica fruits. Disinfection on fruits reduced number of isolated fungi and bacteria.

  11. Effect of Dangguibohyul-Tang, a Mixed Extract of Astragalus membranaceus and Angelica sinensis, on Allergic and Inflammatory Skin Reaction Compared with Single Extracts of Astragalus membranaceus or Angelica sinensis

    Directory of Open Access Journals (Sweden)

    You Yeon Choi

    2016-01-01

    Full Text Available Dangguibohyul-tang (DBT, herbal formula composed of Astragalus membranaceus (AM and Angelica sinensis (AS at a ratio of 5 : 1, has been used for the treatment of various skin diseases in traditional medicine. We investigated the effect of DBT on allergic and inflammatory skin reaction in atopic dermatitis-like model compared to the single extract of AM or AS. DBT treatment showed the remission of clinical symptoms, including decreased skin thickness and scratching behavior, the total serum IgE level, and the number of mast cells compared to DNCB group as well as the single extract of AM- or AS-treated group. Levels of cytokines (IL-4, IL-6, IFN-γ, TNF-α, and IL-1β and inflammatory mediators (NF-κB, phospho-IκBα, and phospho-MAPKs were significantly decreased in AM, AS, and DBT groups. These results demonstrated that AM, AS, and DBT may have the therapeutic property on atopic dermatitis by inhibition of allergic and inflammatory mediators and DBT formula; a mixed extract of AM and AS based on the herb pairs theory especially might be more effective on antiallergic reaction as compared with the single extract of AM or AS.

  12. Molecular Weight and Proposed Structure of the Angelica sinensis Polysaccharide-iron Complex

    Institute of Scientific and Technical Information of China (English)

    WANG,Kai-Ping; CHEN,Zhi-Xiang; ZHANG,Yu; WANG,Pei-Pei; WANG,Ji-Hong; DAI,Li-Quan

    2008-01-01

    The molecular weight and the proposed structure of the Angelica sinensis polysaccharide-iron complex (APIC) were studied.Fourier transform infrared spectroscopy,X-ray powder diffraction,differential scanning calorimetry,transmission electron microscopy,electron paramagnetic resonance,thermogravimetric analysis,atomic force microscopy,and gel filtration chromatography were used to characterize APIC,which is a macromolecule complex composed of Angelica sinensis polysaccharide (ASP) and iron.The structure of APIC was proposed to be a polynuclear ferrihydrite core chelated firmly by an encircling framework of ASP chains,forming a core molecule,which is surrounded by a removable outer protective sheath of colloidal ASP.And the molecular formula of APIC was proposed to be { [(Fe2O3·2.2H2O)1043(ASP)32](ASP)12 },with MW=270000 Da.

  13. Population structure of the giant garter snake, Thamnophis gigas

    Science.gov (United States)

    Paquin, M.M.; Wylie, G.D.; Routman, E.J.

    2006-01-01

    The giant garter snake, Thamnophis gigas, is a threatened species endemic to California's Central Valley. We tested the hypothesis that current watershed boundaries have caused genetic differentiation among populations of T. gigas. We sampled 14 populations throughout the current geographic range of T. gigas and amplified 859 bp from the mitochondrial gene ND4 and one nuclear microsatellite locus. DNA sequence variation from the mitochondrial gene indicates there is some genetic structuring of the populations, with high F ST values and unique haplotypes occurring at high frequency in several populations. We found that clustering populations by watershed boundary results in significant between-region genetic variance for mtDNA. However, analysis of allele frequencies at the microsatellite locus NSU3 reveals very low F ST values and little between-region variation in allele frequencies. The discordance found between mitochondrial and microsatellite data may be explained by aspects of molecular evolution and/or T. gigas life history characteristics. Differences in effective population size between mitochondrial and nuclear DNA, or male-biased gene flow, result in a lower migration rate of mitochondrial haplotypes relative to nuclear alleles. However, we cannot exclude homoplasy as one explanation for homogeneity found for the single microsatellite locus. The mitochondrial nucleotide sequence data supports conservation practices that identify separate management units for T. gigas. ?? Springer 2006.

  14. Angelica sinensis Improves Exercise Performance and Protects against Physical Fatigue in Trained Mice

    OpenAIRE

    Tzu-Shao Yeh; Chi-Chang Huang; Hsiao-Li Chuang; Mei-Chich Hsu

    2014-01-01

    Angelica sinensis (AS) is a well-known medicinal herb and food material with antioxidative and multifunctional pharmacological activities. However, we lack evidence of the effect of AS on exercise performance and physical fatigue. We aimed to evaluate the potential beneficial effect of AS on ergogenic and anti-fatigue functions after physiological challenge. Male ICR strain mice were randomly assigned to four groups (n = 10 per group) for treatment: (1) sedentary control and vehicle treatment...

  15. Antifungal and Antioxidant Activities of the Essential Oil from Angelica koreana Nakai

    OpenAIRE

    2014-01-01

    Purpose. The purpose of this study is to determine the antifungal and antioxidant activities of the essential oil from Angelica koreana. Methods. Essential oil was obtained from the dried roots of A. koreana by steam distillation, and its composition was identified by gas chromatography and mass spectrometry (GC-MS). The minimal inhibitory concentrations (MICs) of the oil fraction and its main components were determined by broth dilution assay using common pathogenic Aspergillus and Trichophy...

  16. Physics Impact of GigaZ

    CERN Document Server

    Erler, J; Hollik, Wolfgang F L; Weiglein, Georg; Zerwas, Peter M

    2000-01-01

    By running the high-energy e^+ e^- collider TESLA in the GigaZ mode on the Z resonance, experiments can be performed on the basis of more than 10^9 Z events. They will allow the measurement of the effective electroweak mixing angle to an accuracy of approximately +- 10^-5. Likewise the W boson mass is expected to be measurable with an error of about 6 MeV near the W^+ W^- threshold. In this note, we study the accuracy with which the Higgs boson mass can be determined from loop corrections to these observables in the Standard Model. The comparison with a directly observed Higgs boson may be used to constrain new physics scales affecting the virtual loops. We also study constraints on the heavy Higgs particles predicted in the Minimal Supersymmetric Standard Model, which are very difficult to observe directly for large masses. Similarly, it is possible to constrain the mass of the heavy scalar top particle.

  17. Updrafts, Downdrafts, Entrainment, and Detrainment in the Giga-LES

    Science.gov (United States)

    Krueger, S. K.; Glenn, I.

    2012-12-01

    We are investigating the properties of evolving three-dimensional updraft and downdraft "cores" in a model dataset from the Giga-LES, a large-domain LES (large-eddy simulation) of tropical oceanic deep convection (Khairoutdinov et al. 2009). We have also applied the analysis method developed by Kuang and Bretherton (2006) to investigate various aspects of the ensemble characteristics of cumulus convection in the Giga-LES. Our results agree with those of Kuang and Bretherton for the cumulus updraft properties. We have examined the relative merits of different entrainment and cloud-top-height assumptions in spectral plume models of cumulus updrafts, the characteristics of downdrafts, and the nature of a rapid transition from shallow to deep convection.isualization of cumulus clouds from the Giga-LES. The realistic structure is associated with entrainment.

  18. Effects of Angelica Oil on Germ Tube Formation and Adhesion of Candida albicans%当归油对白色念珠菌芽管形成及黏附性的影响

    Institute of Scientific and Technical Information of China (English)

    苑天红; 罗喜荣; 佘晓玲; 贺娟; 杨军

    2012-01-01

    目的:研究当归油对白色念珠菌芽管形成及其黏附人口腔上皮细胞的影响.方法:将100、50、10mg/L当归油分别与白色念珠菌悬液、白色念珠菌与人口腔上皮细胞混合液共同孵育,显微镜下计数芽管形成率、白色念珠菌对人口腔上皮细胞的黏附百分率,分别设立阳性对照组和阴性对照组,重复5次试验.结果:当归油各剂量组白色念珠菌芽管生成率及对口腔上皮细胞黏附率低于阴性对照组(P<0.05),100mg/L当归油组白色念珠菌芽管生成率及对口腔上皮细胞黏附率低于50mg/L、10mg/L当归油组(P<0.05),与阳性对照组无统计学差异(P>0.05).结论:当归油对体外白色念珠菌的芽管形成及黏附性有较强抑制作用.%Objective; To investigate the effects of angelica oil on Candida albicans germ tube forma-tion and adhesion of Candida albicans to human oral epithelial cells. Methods: Candida albicans sus-pension and mixed suspension of Candida albicans with human oral epithelial cells were incubated with various concentrations of angelica oil (100, 50, 10 mg/L) respectively. The rates of germ tube forma-tion and Candida albicans adhering to human oral epithelial cells were counted under microscope. Re-sults : All concentrations of angelica oil inhibited Candida albicans germ tube formation and adhesion of Candida albicans to oral epithelial cells. Conclusions; Angelica oil could inhibit Candida albicans germ tube formation and adhesion of Candida albicans to oral epithelial cells.

  19. Characterization of the Anticoagulative Constituents of Angelicae Sinensis Radix and Their Metabolites in Rats by HPLC-DAD-ESI-IT-TOF-MSn.

    Science.gov (United States)

    Wang, Lu; Huang, Shuai; Chen, Bing; Zang, Xin-Yu; Su, Dan; Liang, Jing; Xu, Feng; Liu, Guang-Xue; Shang, Ming-Ying; Cai, Shao-Qing

    2016-03-01

    Angelicae Sinensis Radix is commonly used in traditional Chinese medicine. Pharmacological studies show that Angelicae Sinensis Radix has clear anticoagulant activity. Therefore, in this study, the anticoagulant activity of crude Angelicae Sinensis Radix extracts was investigated by measuring the thrombin times of the extracts. The results revealed that the petroleum ether-soluble fraction of Angelicae Sinensis Radix exhibited significant anticoagulant activity in vitro, and 26 compounds were characterized by high-performance liquid chromatography with diode array detection combined with electrospray ionization ion trap time-of-flight multistage mass spectrometry. In addition, 5 prototype constituents, 24 in vivo metabolites in rat urine and 7 prototype constituents, and 9 in vitro metabolites in the rat hepatic S9 incubation system of the petroleum ether-soluble fraction were tentatively identified. All metabolites were found from Angelicae Sinensis Radix for the first time. Among them, 13 (three ferulic acid-related constituents, six senkyunolide D-related constituents, and four senkyunolide F-related constituents) were identified as new metabolites (new compounds). This study is the first to qualitatively characterize the chemical constituents of the potent anticoagulative extract of Angelicae Sinensis Radix and to explore its metabolism. The result is a notable improvement in the discovery of Angelicae Sinensis Radix metabolites, and it provides the chemical basis for the effective forms and pharmacodynamic substances (prototypes, metabolites, or both) of the anticoagulant activity of Angelicae Sinensis Radix. PMID:26829520

  20. Efficient, solvent-free hydrogenation of α-angelica lactone catalysed by Ru/C at atmospheric pressure and room temperature.

    Science.gov (United States)

    Al-Shaal, Mohammad G; Hausoul, Peter J C; Palkovits, Regina

    2014-09-14

    The hydrogenation of α-angelica lactone was investigated over Ru/C. A mild protocol was developed, which resulted in full conversion and 96% selectivity toward γ-valerolactone. The reaction network was investigated and α-angelica lactone was employed in the one-pot conversion into 2-methyltetrahydrofuran, demonstrating its superiority as a platform molecule in potential biorefinery schemes. PMID:25027166

  1. Differentiation of human adipose-derived stem cells into neuron-like cells by Radix Angelicae Sinensis

    Institute of Scientific and Technical Information of China (English)

    Qiaozhi Wang; Lile Zhou; Yong Guo; Guangyi Liu; Jiyan Cheng; Hong Yu

    2013-01-01

    Human adipose tissues are an ideal source of stem cells. It is important to find inducers that can safely and effectively differentiate stem cells into functional neurons for clinical use. In this study, we investigate the use of Radix Angelicae Sinensis as an inducer of neuronal differentiation. Primary human adipose-derived stem cells were obtained from adult subcutaneous fatty tissue, then pre-induced with 10%Radix Angelicae Sinensis injection for 24 hours, and incubated in serum-free Dulbecco’s modified Eagle’s medium/Nutrient Mixture F-12 containing 40% Radix Angelicae Si-nensis to induce its differentiation into neuron-like cells. Butylated hydroxyanisole, a common in-ducer for neuronal differentiation, was used as the control. After human adipose-derived stem cells differentiated into neuron-like cells under the induction of Radix Angelicae Sinensis for 24 hours, the positive expression of neuron-specific enolase was lower than that of the butylated hydroxyani-sole-induced group, and the expression of glial fibril ary acidic protein was negative. After they were induced for 48 hours, the positive expression of neuron specific enolase in human adipose-derived stem cells was significantly higher than that of the butylated hydroxyanisole-induced group. Our experimental findings indicate that Radix Angelicae Sinensis can induce human adipose-derived stem celldifferentiation into neuron-like cells and produce less cytotoxicity.

  2. Morphometric characteristics in the horseshoe crab Tachypleus gigas (Arthropoda: Merostomata)

    Digital Repository Service at National Institute of Oceanography (India)

    Vijayakumar, R.; Das, S.; Chatterji, A.; Parulekar, A.H.

    , body weight were found statistically significant (p< 0.05) in the male and female horseshoe crab, Tachypleus gigas (Muller). In females, increase in weight was found to follow the cube law strictly. The carapace width grew faster at higher carapace...

  3. Discussion on the optimal dose of angelica sinensis sini decoctioncombined with mifepristone treatment to patients after endometriosis operation

    Institute of Scientific and Technical Information of China (English)

    Hong-Qin Liu

    2015-01-01

    Objective: Discussion on the optimal dose of angelica sinensis sini decoction combined with mifepristone treatment to patients after endometriosis operation. Method: Randomly divided 110 cases of patients who have done the endometriosis (EMS) operation into 5 groups, made sure each group were 22 cases respectively: KB group (blank group), D1 group (merely 5mg mifepristone), D2 group (merely angelica sinensis sini decoction), G1 group (5mg mifepristone+angelica sinensis sini decoction), G2 group (10mg mifepristone+angelica sinensis sini decoction), compared the serum sex hormone, CA125 levels changes, clinical remission and recurrence rate, adverse reactions etc. before and after treatment of each group. Results: The complete remission rate in G1 and G2 group was obviously higher than that in D1 and D2 group(P0.05), CA125 levels in G1 and G2 group were higher than that in D1 and D2 group (P0.05); P, E2 levels in G1 and G2 group were obviously lower than that in D1 and D2 group (P0.05). Conclusion: Adopting low dose (5mg) mifepristone combined angelica sinensis sini decoction to treat patients who have done endometriosis operation, it was found that the serum sex hormone,CA125 levels were obviously lower, clinical remission and recurrence rate, adverse reactions became lower, compared with high dose (10mg) mifepristone combined angelica sinensis sini decoction, clinical treatable effects had no difference, but the former was more cheaper, and comprehensive application value was higher.

  4. Application of mid-infrared spectroscopy in analyzing different segmented production of Angelica by AB-8 macroporous resin

    Science.gov (United States)

    Guo, Yizhen; Wang, Jingjuan; Lu, Lina; Sun, Suqin; Liu, Yang; Xiao, Yao; Qin, Youwen; Xiao, Lijuan; Wen, Haoran; Qu, Lei

    2016-01-01

    As complicated mixture systems, chemical components of Angelica are very difficult to identify and discriminate, so as not to control its quality effectively. In recent years, Mid-infrared spectroscopy has been innovatively employed to identify and assess the quality of Traditional Chinese medicine (TCM) products. In this paper, the macroscopic IR fingerprint method including Fourier transform infrared spectroscopy (FT-IR), the second derivative infrared spectroscopy (SD-IR) and two-dimensional correlation infrared spectroscopy (2D-IR), are applied to study and identify Angelica raw material, the decoction and different segmented production of AB-8 macroporous resin. FT-IR spectrum indicates that Angelica raw material is rich in sucrose and the correlation coefficient is 0.8465. The decoction of Angelica contains varieties of polysaccharides components and the content is gradually decreased with increasing concentration of ethanol. In addition, the decoction of Angelica contains a certain amount of protein components and 50% ethanol eluate has more protein than other eluates. Their second derivative spectra amplify the differences and reveal the potentially characteristic IR absorption bands, then we conclude that the decoction of Angelica contains a certain amount of ferulic acid and ligustilide. And 30% ethanol eluate, 50% ethanol eluate and 70% ethanol eluate are similar to ligustilide. Further, 2D-IR spectra enhance the spectral resolution and obtain much new information for discriminating the similar complicated samples. It is demonstrated that the above three-step infrared spectroscopy could be applicable for effective, visual and accurate analysis and identification of very complicated and similar mixture systems of traditional Chinese medicines.

  5. Anti-inflammatory coumarins with short- and long-chain hydrophobic groups from roots of Angelica dahurica cv. Hangbaizhi.

    Science.gov (United States)

    Wei, Wei; Wu, Xiu-Wen; Deng, Gai-Gai; Yang, Xiu-Wei

    2016-03-01

    The (1)H NMR-guided fractionation of a cyclohexane soluble portion of the 75% ethanolic extract of the roots of Angelica dahurica cv. Hangbaizhi led to the isolation of two coumarins, namely, 5-(3"-hydroxy-3"-methylbutyl)-8-hydroxyfuranocoumarin, and isobyakangelicin hydrate-3"-ethyl ether, and ten coumarins with short- or long-chain hydrophobic groups, namely, andafocoumarins A-J. Their structures were elucidated by extensive spectroscopic analyses. The absolute configurations of the C-2" secondary alcohols in ten of these compounds were deduced via the circular dichroism data of the in situ formed [Rh2(OCOCF3)4] complex, and oxidation reactions were utilized to determine location of the double bonds in the lipid chain of andafocoumarins H and I, respectively. The long-chain hydrophobic group of andafocoumarin J was determined by the method of chemical degradation and GC-MS analysis. It was the first time that coumarins with short- or long-chain hydrophobic groups in this plant had been comprehensively investigated. All isolates were assayed for their inhibitory effect against nitric oxide (NO) production in a lipopolysaccharide (LPS)-activated RAW264.7 macrophage cell line, among which andafocoumarins A and B exhibited a potent inhibition on LPS-activated NO production with IC50 values of 19.7 and 13.9 μM, respectively, indicating their stronger inhibitory activity than l-N(6)-(1-iminoethyl)-lysine (IC50=23.7 μM), a selective inhibitor of inducible nitric oxide synthase. PMID:26775737

  6. Angelica polymorpha Maxim Induces Apoptosis of Human SH-SY5Y Neuroblastoma Cells by Regulating an Intrinsic Caspase Pathway.

    Science.gov (United States)

    Rahman, Md Ataur; Bishayee, Kausik; Huh, Sung-Oh

    2016-02-29

    Angelica polymorpha Maxim root extract (APRE) is a popular herbal medicine used for treating stomachache, abdominal pain, stomach ulcers, and rheumatism; however the effect of APRE on cancer cells has not yet been explored. Here, we examined APRE cytotoxicity seen on target neuroblastoma cells (NB) using cell viability assays, DAPI visualization of fragmented DNA, and Western blotting analysis of candidate signaling pathways involved in proliferation and apoptosis. We demonstrated that APRE reduced cell viability in NB to a greater extent than in fibroblast cells. In addition, we found that APRE could inhibit the three classes of MAPK proteins and could also down-regulate the PI3K/AKT/GSK-3β activity all being relevant for proliferation and survival. APRE could also up-regulate Bax expression and down-regulate Bcl-2 and Mcl-1. With APRE treatment, depolarization of mitochondria membrane potential and activation of caspase-3 was demonstrated in the SH-SY5Y cells. We could not found increased activity of death receptor and caspase-8 as markers of the extrinsic apoptosis pathway for the APRE treated cells. In presence of a caspase-3 siRNA and a pan-caspase inhibitor, APRE could not reduce the viability of NB cells to a significant degree. So we predicted that with APRE, the intrinsic pathway was solely responsible for inducing apoptosis as we also showed that the non-caspase autophagy pathway or ER stress-ROS mediated pathways were not involved. These findings demonstrate that an intrinsic mitochondria-mediated apoptosis pathway mediates the apoptotic effects of APRE on SH-SY5Y cells, and that APRE shows promise as a novel agent for neuroblastoma therapy. PMID:26674967

  7. Molecular and phytochemical investigation of Angelica dahurica and Angelica pubescentis essential oils and their biological activity against Aedes aegypti, Stephanitis pyrioides, and Colletotrichum species.

    Science.gov (United States)

    Tabanca, Nurhayat; Gao, Zengping; Demirci, Betul; Techen, Natascha; Wedge, David E; Ali, Abbas; Sampson, Blair J; Werle, Chris; Bernier, Ulrich R; Khan, Ikhlas A; Baser, Kemal Husnu Can

    2014-09-01

    In this study, Angelica dahurica and Angelica pubescentis root essential oils were investigated as pest management perspectives, and root samples were also analyzed genetically using the nuclear ribosomal internal transcribed spacer (ITS) region as a DNA barcode marker. A. pubescentis root essential oil demonstrated weak antifungal activity against Colletotrichum acutatum, Colletotrichum fragariae, and Colletotrichum gloeosporioides, whereas A. dahurica root essential oil did not show antifungal activity. Conversely, A. dahurica root essential oil demonstrated better biting deterrent and insecticidal activity against yellow fever mosquito, Aedes aegypti, and azalea lace bugs, Stephanitis pyrioides, than A. pubescentis root oil. The major compounds in the A. dahurica oil were found as α-pinene (46.3%), sabinene (9.3%), myrcene (5.5%), 1-dodecanol (5.2%), and terpinen-4-ol (4.9%). α-Pinene (37.6%), p-cymene (11.6%), limonene (8.7%), and cryptone (6.7%) were the major compounds found in the A. pubescentis oil. In mosquito bioassays, 1-dodecanol and 1-tridecanol showed antibiting deterrent activity similar to the positive control DEET (N,N-diethyl-3-methylbenzamide) at 25 nmol/cm(2) against Ae. aegypti, whereas only 1-tridecanol showed repellent activity in human-based cloth patch bioassay with minimum effective dosages (MED) of 0.086 ± 0.089 mg/cm(2) (DEET = 0.007 ± 0.003 mg/cm(2)). In larval bioassays, 1-tridecanol was more toxic with an LC50 value of 2.1 ppm than 1-dodecanol having an LC50 value of 5.2 ppm against 1-day-old Ae. aegypti larvae. 1-Dodecanol and 1-tridecanol could be useful for the natural mosquito control agents. PMID:25133520

  8. Effect of intrauterine hypoxia and Angelica sinensis injection on dentate gyrus neurons and learning and memory in juvenile rats

    Institute of Scientific and Technical Information of China (English)

    Feng Zhao; Yi Han; Jing Ma; Hong Yu; Yan He; Xiaoming Zhong

    2009-01-01

    BACKGROUND: The present study analyzed the effect of 3 days (2 h/d) intrauterine hypoxia on learning and memory in juvenile rats, as well as the therapeutic effects of Angelica sinensis on dentate gyrus neurons, as well as learning and memory.OBJECTIVE: To explore the effects of intrauterine hypoxia on hippocampal dentate gyrus neurons, as well as learning and memory, in juvenile rats; to explore N-methyI-D-aspartate receptor-1 (NMDAR1) expression in the dentate gyrus of neonatal rats following intrauterine hypoxia, as well as prolonged hypoxia; to investigate the regulatory mechanisms of Angelica sinensis.DESIGN, TIME AND SETTING: A randomized and controlled experiment based on developmental neurobiology was performed at the Department of Histology and Embryology in Luzhou Medical College from October 2007 to October 2008.MATERIALS: Angelica sinensis solution (250 g/L) was obtained from Central South Hospital of Wuhan University, China. Neuron-specific enolase and NMDAR1 mRNA in situ hybridization reagents were provided by Wuhan Boster Biological Technology, China. Image-Pro Plus 6.0 analysis system was purchased from Media Cybernetics, USA.METHODS: Healthy pregnant Sprague Dawley rats (n = 30) were randomly divided into control (n = 10), hypoxia (n = 10), and Angelica (n = 10) groups. The Angelica and hypoxia pregnant rats were placed in a three-gas incubator (oxygen concentration: 13%) starting with day 14 of pregnancy for 2 hours/day for 5 consecutive days to establish a fetal rat intrauterine hypoxia model. One hour prior to modeling, the pregnant rats from the Angelica and hypoxia groups received Angelica sinensis and normal saline (8 mL/kg) injections, respectively, through the caudal vein. The control group procedures were identical to the hypoxia group, but lacked the hypoxic conditions.MAIN OUTCOME MEASURES: Brain tissues of neonatal rats were used to detect expression of NMDAR1 mRNA, and brain tissues of juvenile rats aged 30 days were used to determine

  9. Moderate establishment success of Pacific oyster, Crassostrea gigas, on a sheltered intertidal mussel bed

    DEFF Research Database (Denmark)

    Holm, M.W.; Davids, J.K.; Dolmer, Per;

    2015-01-01

    The Pacific oyster (Crassostrea gigas Thunberg 1793) is introduced into marine ecosystems worldwide. In Denmark, C. gigas was introduced into the micro tidal Limfjord, around 1972 for aquaculture. This study describes the population structure of C. gigas at Agger Tange in 2007, 2009, 2010 and 2011....... Here, C. gigas use beds of Blue mussels (Mytilus edulis L.) as primary habitat. The mean abundance (±1 SD) of C. gigas was unchanged during our study (45±2indv.m-2), while it increased for M. edulis from 2010 to 2011 (934±610 to 1434±750indv.m-2, respectively). In 2009, a newly settled cohort of C....... gigas was present, but in the succeeding years no or negligible recruitment was recorded. However, age cohort analyses, based on individual shell size at different ages, suggest successful recruitment in three out of seven years. A comparison with the course of the bioinvasion in List Tidal Basin...

  10. Stochasticity of convection in Giga-LES data

    Science.gov (United States)

    De La Chevrotière, Michèle; Khouider, Boualem; Majda, Andrew J.

    2015-12-01

    The poor representation of tropical convection in general circulation models (GCMs) is believed to be responsible for much of the uncertainty in the predictions of weather and climate in the tropics. The stochastic multicloud model (SMCM) was recently developed by Khouider et al. (Commun Math Sci 8(1):187-216, 2010) to represent the missing variability in GCMs due to unresolved features of organized tropical convection. The SMCM is based on three cloud types (congestus, deep and stratiform), and transitions between these cloud types are formalized in terms of probability rules that are functions of the large-scale environment convective state and a set of seven arbitrary cloud timescale parameters. Here, a statistical inference method based on the Bayesian paradigm is applied to estimate these key cloud timescales from the Giga-LES dataset, a 24-h large-eddy simulation (LES) of deep tropical convection (Khairoutdinov et al. in J Adv Model Earth Syst 1(12), 2009) over a domain comparable to a GCM gridbox. A sequential learning strategy is used where the Giga-LES domain is partitioned into a few subdomains, and atmospheric time series obtained on each subdomain are used to train the Bayesian procedure incrementally. Convergence of the marginal posterior densities for all seven parameters is demonstrated for two different grid partitions, and sensitivity tests to other model parameters are also presented. A single column model simulation using the SMCM parameterization with the Giga-LES inferred parameters reproduces many important statistical features of the Giga-LES run, without any further tuning. In particular it exhibits intermittent dynamical behavior in both the stochastic cloud fractions and the large scale dynamics, with periods of dry phases followed by a coherent sequence of congestus, deep, and stratiform convection, varying on timescales of a few hours consistent with the Giga-LES time series. The chaotic variations of the cloud area fractions were

  11. Protective effect of Angelica sinensis on cerebral neurons from rat embryos under hypoxia

    Institute of Scientific and Technical Information of China (English)

    Yuling Wu; Hongxian Zhao; Hong Yu

    2007-01-01

    BACKGROUND: The enhanced expression of c-Fos protein in nerve cells after hypoxia is the marker for converting extracellular hypoxia information to intracellular changes at hypoxia, and it is suspected that the increase of c-Fos protein can lead to the synthesis and excretion of related neurotrophic factor and nerve growth factor. However, it is still unclear what functional changes of nerve cells are induced by the increase of c-Fos protein at hypoxia, and whether it is good for the survival of damaged neurons.OBJECTIVE: To observe the expression of c-Fos in the cerebral neurons from embryos of rats with hypoxia in uterus, and investigate the pathway for the protective effect of Angelica sinensis injection on the cerebral neurons from rat embryos under hypoxia.DESIGN: A completely randomized controlled study.SETTING: Department of Histology and Embryology, Luzhou Medical College.MATERIALS: Twelve female Wistar rats in oestrum and 1 male adult Wistar rat with body mass of 220 to 250 g were selected. Rabbit-anti-rat neuro-specific enolase (NSE) and rabbit-anti-rat c-Fos were purchased from Wuhan Boster Biological Technology Co., Ltd.; Double-staining kit was bought from Beijing Zhongshan Golden Bridge Biotechnology Co., Ltd. Angelica sinensis injection was produced by the Department of Pharmacy, the Second Affiliated Hospital of Hubei Medical University.METHODS: The experiments were completed in the experimental animal center and the Department of Histology and Embryology of Luzhou Medical College from December 2004 to December 2005. ① Twelve adult female Wistar rats in oestrum and 1 male Wistar rat were housed in one rearing cage. The appearance of vaginal embolus at 8:00 in the next morning was recorded as 0 day of pregnancy and the rats were recorded for 15 days, and they were divided randomly into three groups, control group (n =4), hypoxia group (n =4)and Angelica group (n =4). The pregnant rats in the hypoxia group were firstly injected with saline (8 m

  12. Molecular cloning of a full-length cDNA for ECBP21 from Angelica dahurica

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    ECBP21 is an extracellular calmodulin-binding protein which was first detected and purified from extracellular extracts of suspension-cultured cells of Angelica dahurica. The purified protein was electroblotted onto PVDF membrane and the amino acid sequences from 1 to 20 were determined. Using degenerate oligonucleotides of the sequence, a full-length cDNA coding for ECBP21 was isolated by a combination of RT-PCR and 5′-RACE cloning. The cDNA contains 947 nucleotides and codes for a precursor protein of 216 amino acids. The N-terminal 1-25 amino acid sequence is a predicted signal peptide and the other 26-216 amino acid sequence is a mature peptide. The 26-45 amino acid sequence shows identity with the N-terminal amino acid sequence of purified ECBP21 from Angelica dahurica. The fragment of encoding the mature protein was cloned into pET-28b(+) and transformed into E. coli BL21(DE3). A protein with relative molecular mass 21 ku was expressed in E. coli. Using a biotinylated-CaM gel overlay technique, the expression protein was tested for its ability to bind CaM. The results indicated that the expression protein is a Ca2+- dependent CaM-binding protein. Thus, these results further defined the cDNA clone for ECBP21. This work laid a foundation for elucidating biological functions of ECBP21 by using molecular biological means.

  13. Amylase polymorphism affects growth in the cupped oyster Crassostrea gigas

    OpenAIRE

    Huvet, Arnaud; Samain, Jean-francois; Boudry, Pierre; Bedier, Edouard; Ropert, Michel; Van Wormhoudt, A

    2005-01-01

    The better understanding of physiological and environmental factors that determine optimal food conversion efficiencies is of major interest for the cupped oyster Crassostrea gigas for which the strong increase of aquaculture has been correlated in France with a decrease in productivity due to competition between aquatic species for limited food supplies at grow-out sites. To investigate the non-neutrality of the polymorphism of amylase, a key enzyme for carbohydrate assimilation, in oyster p...

  14. Adult Pacific Oyster (Crassostrea gigas) May Have Light Sensitivity

    OpenAIRE

    Wu, Changlu; Wang, Jiao; Yang, Yanjian; Li, Zhuang; Guo, Ting; Li, Yongchuan; Wang, Xiaotong

    2015-01-01

    Light-sensitivity is an important aspect of mollusk survival as it plays a vital role in reproduction and predator avoidance. In the Pacific oyster Crassostrea gigas light sensitivity has been demonstrated in the larval stage but has not yet been conclusively demonstrated in adult oysters. In this paper we describe an experiment which was undertaken to determine if adult Pacific oysters were sensitive to light. One LED flashlight was used to shine light onto adult oysters while they were filt...

  15. Analysis of toughening mechanisms in the Strombus gigas shell.

    Science.gov (United States)

    DiPette, Scott; Ural, Ani; Santhanam, Sridhar

    2015-08-01

    A finite element analysis of the fracture mechanisms in the Strombus gigas conch shell is presented in this work. The S. gigas shell has a complex microarchitecture that consists of three main macroscopic layers of calcium carbonate: the inner, middle, and outer layers. Each layer is composed of lamellae of calcium carbonate, held together by a cohesive organic protein. As a result of this elaborate architecture, the S. gigas shell exhibits a much greater damage tolerance than the calcium carbonate by itself, with a work of fracture reported to be three magnitudes of order greater. The two main energy dissipating factors that contribute to this are multiple, parallel cracking along first-order interfaces in the inner and outer layers and crack bridging through the second-order interfaces of the middle layer. Finite element analysis was conducted to simulate and replicate flexural strength and work-of-fracture results obtained in the literature for both dry and wet physical bend test specimens. Several parameters were varied including protein strength and fracture toughness, initial protein damage, and the relative heights of macroscopic layers in order to create a model that predicted published, experimental results. The simulations indicate that having some initially weakened protein interfaces is key to matching the parallel cracking in the inner layer of the physical specimens. The wet models exhibit significantly higher work of fracture compared to the dry specimens in large part due to a crack growth resistance behavior in the middle layer, which was successfully modeled. The parametric studies that have been performed on the finite element models provide guidelines for manufacturing the ideal S. gigas-inspired, biomimetic composite. PMID:25955562

  16. EFFECTS OF REINFORCED DECOCTION OF ANGELICAE SINENSIS FOR ENRICHING BLOOD ON THE IMMUNITY OF IMMUNOSUPPRESSED MICE

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Objective To investigate the effect of reinforced Decoction of Angelicae Sinensis for enriching blood (RDAEB) on the immunity of immunosuppressed mice induced by cyclophosphamide (Cy). Methods Mice were given RDAEB through stomach perfusion for 10 d(50 mg/d). Then, RBC-C3bR rate,RBC-IC rate( as the indexes of erythrocyte immunity)and E-rosette forming rate,acidic α-naphthyl acetate esterase positive rate, lymphocyte transformation rate (as the indexes of cellular immunity) of mice were tested.Results RBC-C3Br rate, RBC-IC rate,E-rosette forming rate, acidic α-naphthyl acetate esterase positive rate and lymphocyte transformation rate in the Cy-RDAEB group were markedly higher than those in the Cy group (P<0. 01 ),and returned to the levels of normal group. Conclusion RDAEB is effective in recovering and enhancing cellular and erythrocyte immunity of immunosuppressed mice.

  17. A glycoprotein in shells of conspecifics induces larval settlement of the Pacific oyster Crassostrea gigas.

    Directory of Open Access Journals (Sweden)

    Hebert Ely Vasquez

    Full Text Available Settlement of larvae of Crassostrea gigas on shell chips (SC prepared from shells of 11 different species of mollusks was investigated. Furthermore, the settlement inducing compound in the shell of C. gigas was extracted and subjected to various treatments to characterize the chemical cue. C. gigas larvae settled on SC of all species tested except on Patinopecten yessoensis and Atrina pinnata. In SC of species that induced C. gigas larvae to settle, settlement was proportionate to the amount of SC supplied to the larvae. When compared to C. gigas SC, all species except Crassostrea nippona showed lower settlement inducing activities, suggesting that the cue may be more abundant or in a more available form to the larvae in shells of conspecific and C. nippona than in other species. The settlement inducing activity of C. gigas SC remained intact after antibiotic treatment. Extraction of C. gigas SC with diethyl ether (Et2O-ex, ethanol (EtOH-ex, and water (Aq-ex did not induce larval settlement of C. gigas larvae. However, extraction of C. gigas SC with 2N of hydrochloric acid (HCl-ex induced larval settlement that was at the same level as the SC. The settlement inducing compound in the HCl-ex was stable at 100°C but was destroyed or degraded after pepsin, trypsin, PNGase F and trifluoromethanesulfonic acid treatments. This chemical cue eluted between the molecular mass range of 45 and 150 kDa after gel filtration and revealed a major band at 55 kDa on the SDS-PAGE gel after staining with Stains-all. Thus, a 55 kDa glycoprotein component in the organic matrix of C. gigas shells is hypothesized to be the chemical basis of larval settlement on conspecifics.

  18. [Protective effect of Angelica sinensis polysaccharides on subacute renal damages induced by D-galactose in mice and its mechanism].

    Science.gov (United States)

    Fan, Yan-ling; Xia, Jie-yu; Jia, Dao-yong; Zhang, Meng-si; Zhang, Yan-yan; Wang, Lu; Huang, Guo-ning; Wang, Ya-ping

    2015-11-01

    To explore the protective effect of Angelica sinensis polysaccharides(ASP) on subacute renal damages induced by D-galactose in mice and its mechanism. Male C57BL/6J mice were randomly divided into 3 groups, with 10 mice in each group. The D-galactose model group was subcutaneously injected with D-galactose (120 mg x kg(-1)), qd x 42; the ASP + D-galactose model group was intraperitoneally injected with ASP since the 8th day of the replication of the D-galactose model, qd x 35; and the normal control group was subcutaneously injected with saline at the same dose and time. On the 2nd day of after the injection, the peripheral blood was collected to measure the content of BUN, Crea, UA, Cys-C; paraffin sections were made to observe the renal histomorphology by HE staining; senescence-associated β-g-alactosidase (SA-β-Gal) stain was used to observe the relative optical density (ROD) in renal tissues; transmission electron microscopy was assayed to observe the renal ultrastructure; the renal tissue homogenate was prepared to measure the content of SOD, GSH-PX, MDA; the content of AGEs and 8-OH-dG were measured by ELISA. According to the result, compared with the D-galactose model group, the ASP + D-galactose model group showed obviously decreases in the content of BUN, Crea, UA, Cysc, AGES, 8-OH-dG, the number of hardening renal corpuscle, renal capsular space and renal tubular lumen, ROD of SA-β-Gal staining positive kidney cells, mesangial cells, basement membrane thickness, podocyte secondary processes fusion and MDA and increases in the number of normal renal corpuscle, ribosome and rough endoplasmic reticulum in podocytes, the activity of SOD and GSH-PX. In Conclusion, A. sinensis polysaccharides can antagonize kidney subacute damages induced by D-galactose in mice. Its protective mechanism may be correlated with the inhibition of the oxidative stress injury. PMID:27071262

  19. Photothermal characterization of thermally treated shells of Strombus Gigas

    Science.gov (United States)

    Hernández-Ayala, A.; Quintana, P.; Alvarado-Gil, J. J.; Aldana, D.

    2005-06-01

    The thermal properties of the marine shells of the mollusk Strombus gigas are studied using photoacoustic techniques. In order to generate changes in the layered structure of the shells, they were thermally treated in the range from ambient temperature up to 400ºC. Our results show that the thermal diffusivity and conductivity have a maximum at 200ºC due to the degradation of the organic matrix. At higher temperatures the thermal diffusivity and conductivity decrease due to the calcium carbonate structural phase transition from aragonite to calcite.

  20. The invasive Pacific oyster, Crassostrea gigas, in Scandinavia coastal waters

    DEFF Research Database (Denmark)

    Dolmer, Per; Holm, Mark Wejlemann; Strand, Åsa;

    visualized the need for a continued collaboration between scientists in the Scandinavian countries, as the bio-invasion is a cross-border issue and management actions then have to be synchronized, and based on a “state of the art” knowledge of the Scandinavian bio-invasion of the species. The risk assessment......A massive invasion of the Pacific oyster, Crassostrea gigas , has occurred in Scandinavia during the last decade. The introduction and dispersal was described through collaboration between scientists from Sweden, Denmark and Norway. This work has been followed up by national activities that clearly...

  1. GigaTracker, the NA62 Beam Tracker

    CERN Document Server

    Velghe, Bob; Bonacini, Sandro; Ceccucci, Augusto; Degrange, Jordan; Kaplon, Jan; Kluge, Alexander; Mapelli, Alessandro; Morel, Michel; Noël, Jérôme; Noy, Matthew; Perktold, Lukas; Petagna, Paolo; Poltorak, Karolina; Riedler, Petra; Romagnoli, Giulia; Chiozzi, Stefano; Ramusino, Angelo Cotta; Fiorini, Massimiliano; Gianoli, Alberto; Petrucci, Ferruccio; Wahl, Heinrich; Arcidiacono, Roberta; Jarron, Pierre; Marchetto, Flavio; Gil, Eduardo Cortina; Nuessle, Georg; Szilasi, Nicolas

    2015-01-01

    The GigaTracker measures the momentum, the direction and the crossing time of all the NA62 secondary beam particles. It is composed of three hybrid silicon pixel stations and four achromatic magnets. All the stations have a rate capability above 750 MHz, a single hit time resolution better than 200 ps and a thickness less than 0.5 % of X = X 0 . The stations’ sensor is read out by ten custom TDCpix ASICs. An innovative microchannel cooling solution is used to keep the sensor temperature below 0 °C. The stations are operated in vacuum and are easily swappable

  2. Comparison of the toxicity of aqueous and ethanol fractions of Angelica keiskei leaf using the eye irritancy test

    OpenAIRE

    SON, HYEONG-U; YOON, EUN-KYUNG; CHA, YONG-SOO; Kim, Min-A; SHIN, YONG-KYU; KIM, JONG-MYUNG; CHOI, YONG-HEE; Lee, Sang-Han

    2012-01-01

    To determine whether aqueous and ethanol fractions of the Angelica keiskei leaf exert toxicity when used for cosmetic purposes, we performed the acute eye irritancy test. Animals were treated with sample fractions (100 mg/dose) according to standard procedure guidelines. No significant changes or damage was detected in the fraction-treated groups in terms of ocular lesions in the cornea, the size of the cornea with turbidity, swelling of the eyelid and emission discharge. However, sodium dioc...

  3. GigaTracker, a Thin and Fast Silicon Pixels Tracker

    CERN Document Server

    Velghe, Bob; Bonacini, Sandro; Ceccucci, Augusto; Kaplon, Jan; Kluge, Alexander; Mapelli, Alessandro; Morel, Michel; Noël, Jérôme; Noy, Matthew; Perktold, Lukas; Petagna, Paolo; Poltorak, Karolina; Riedler, Petra; Romagnoli, Giulia; Chiozzi, Stefano; Cotta Ramusino, Angelo; Fiorini, Massimiliano; Gianoli, Alberto; Petrucci, Ferruccio; Wahl, Heinrich; Arcidiacono, Roberta; Jarron, Pierre; Marchetto, Flavio; Gil, Eduardo Cortina; Nuessle, Georg; Szilasi, Nicolas

    2014-01-01

    GigaTracker, the NA62’s upstream spectrometer, plays a key role in the kinematically constrained background suppression for the study of the K + ! p + n ̄ n decay. It is made of three independent stations, each of which is a six by three cm 2 hybrid silicon pixels detector. To meet the NA62 physics goals, GigaTracker has to address challenging requirements. The hit time resolution must be better than 200 ps while keeping the total thickness of the sensor to less than 0.5 mm silicon equivalent. The 200 μm thick sensor is divided into 18000 300 μm 300 μm pixels bump-bounded to ten independent read-out chips. The chips use an end-of-column architecture and rely on time-over- threshold discriminators. A station can handle a crossing rate of 750 MHz. Microchannel cooling technology will be used to cool the assembly. It allows us to keep the sensor close to 0 C with 130 μm of silicon in the beam area. The sensor and read-out chip performance were validated using a 45 pixel demonstrator with a laser test setu...

  4. Effect of Bovine Plasma Protein on Autolysis and Gelation of Protein Extracted from Giant Squid (Dosidicus gigas Mantle

    Directory of Open Access Journals (Sweden)

    Laura Raquel Marquez-Alvarez

    2015-01-01

    Full Text Available The effect of bovine plasma protein (BPP on the inhibition of autolytic activity and its effect on the gelling properties of a protein concentrate (PC obtained from jumbo squid (Dosidicus gigas mantle were investigated. Sols and gels were prepared from the PC by adding different amounts of BPP (0, 1, and 2%. Dynamic oscillatory measurements indicated that systems with 1% BPP had a higher elastic modulus (G′, in which hydrophobic interactions were favored. Concerning the technological and textural quality of the gels, BPP caused a greater water holding capacity (WHC, force, cohesiveness, and elasticity, probably due to improvement of the electrostatic and hydrophobic interactions during gel formation. Scanning electron microscopy (SEM allowed visualization of the formation of more rigid and ordered gels with less porosity when BPP was added. Therefore, the addition of BPP improved the gelling capacity of proteins extracted from giant squid.

  5. Caspase-3 serves as an intracellular immune receptor specific for lipopolysaccharide in oyster Crassostrea gigas.

    Science.gov (United States)

    Xu, Jiachao; Jiang, Shuai; Li, Yiqun; Li, Meijia; Cheng, Qi; Zhao, Depeng; Yang, Bin; Jia, Zhihao; Wang, Lingling; Song, Linsheng

    2016-08-01

    Apoptosis is a form of programmed cell death process controlled by a family of cysteine proteases called caspases, which plays a crucial role in the immune system homeostasis. The apoptosis and the detailed regulation mechanism have been well studied in vertebrate, but the information in lower animals, especially invertebrates, is still very limited. In the present study, Caspase-3 in the Pacific oyster Crassostrea gigas (designated CgCaspase-3) was enriched by lipopolysaccharide (LPS) affinity chromatography and further identified by MALDI-TOF/TOF-mass spectrometry. The binding activity of CgCaspase-3 to LPS was confirmed by enzyme-linked immunosorbent assay, and surface plasmon resonance analysis revealed its high binding specificity and moderate binding affinity (KD = 1.08 × 10(-6) M) to LPS. The recombinant CgCaspase-3 exhibited high proteolytic activity to substrate Ac-DEVD-pNA and relatively weak activity to substrate Ac-DMQD-pNA and Ac-VDQQD-pNA. The binding of CgCaspase-3 to LPS significantly inhibited its proteolytic activity toward AC-DEVD-pNA in vitro. The over-expression of CgCaspase-3 leaded to the phosphatidylserine exposure on the external plasma membrane and the cleavage of poly (ADP-ribose) polymerase, which reduced cell viability, and finally induced cell apoptosis. But the cell apoptosis mediated by CgCaspase-3 in vivo was significantly inhibited by the treatment of LPS. These results collectively indicated that CgCaspase-3 could serve as an intracellular LPS receptor, and the interaction of LPS with CgCaspase-3 specifically inhibited the cell apoptosis induced by CgCaspase-3. PMID:26993662

  6. Investigation of jumbo squid (Dosidicus gigas) skin gelatin peptides for their in vitro antioxidant effects.

    Science.gov (United States)

    Mendis, Eresha; Rajapakse, Niranjan; Byun, Hee-Guk; Kim, Se-Kwon

    2005-09-01

    Peptides derived from tryptic hydrolysate of jumbo squid (Dosidicus gigas) skin gelatin were assessed for their antioxidant properties in different in vitro assay systems. The hydrolysate itself exhibited a strong lipid peroxidation inhibition and it was much higher than that of natural antioxidant, alpha-tocopherol. In addition, it could scavenge highly active free radicals in oxidative systems, in the order of hydroxyl and carbon-centered radicals. Two representative peptides with comparatively higher antioxidant potency were purified and characterized as Phe-Asp-Ser-Gly-Pro-Ala-Gly-Val-Leu (880.18 Da) and Asn-Gly-Pro-Leu-Gln-Ala-Gly-Gln-Pro-Gly-Glu-Arg (1241.59 Da). Furthermore, viability of radical-mediated oxidation-induced human lung fibroblasts was enhanced following the treatment of two peptides. However it did not exhibit substantial ion chelation, and we presumed that the observed radical scavenging potency of these peptides play a vital role for their strong antioxidant activity. Based on our results we suggest that hydrophobic amino acids present in peptide sequences contributed greatly for observed antioxidant activities. PMID:15916780

  7. Purification and characterization of trimethylamine-N-oxide demethylase from jumbo squid (Dosidicus gigas).

    Science.gov (United States)

    Fu, Xue-Yan; Xue, Chang-Hu; Miao, Ben-Chun; Liang, Jun-Ni; Li, Zhao-Jie; Cui, Feng-Xia

    2006-02-01

    Trimethylamine-N-oxide demethylase (TMAOase) was purified from Jumbo squid (Dosidicus gigas) and characterized in detail herein. The TMAOase was extracted from squid with 20 mM Tris-acetate buffer (pH 7.0) containing 1.0 M NaCl, followed by acid treatment and heat treatment. Then it was purified by deithylaminoethyl-cellulose and Sephacryl S-300 chromatography, subsequently resulting in an 839-fold purification. The molecular mass of the TMAOase was defined to be 17.5 kDa. The optimum pH of the purified TMAOase was 7.0, and its optimum temperature was confirmed to be 55 degrees C. The TMAOase was stable to heat treatment up to 50 degrees C and stable at pH 7.0-9.0. Reducing agents such as DTT, Na2SO3, and NADH were effective at activating TMAOase, and ethylenediaminetetraacetic acid, as well as Mg2+ and Ca2+, could also enhance the activity of TMAOase remarkably, whereas the TMAOase could be significantly inhibited by tea polyphenol, phytic acid and acetic acid. In addition, the TMAOase converted TMAO to dimethylamine and formaldehyde stoichiometrically with a K(m) of 26.2 mM. PMID:16448210

  8. Protective role of Arapaima gigas fish scales: structure and mechanical behavior.

    Science.gov (United States)

    Yang, Wen; Sherman, Vincent R; Gludovatz, Bernd; Mackey, Mason; Zimmermann, Elizabeth A; Chang, Edwin H; Schaible, Eric; Qin, Zhao; Buehler, Markus J; Ritchie, Robert O; Meyers, Marc A

    2014-08-01

    The scales of the arapaima (Arapaima gigas), one of the largest freshwater fish in the world, can serve as inspiration for the design of flexible dermal armor. Each scale is composed of two layers: a laminate composite of parallel collagen fibrils and a hard, highly mineralized surface layer. We review the structure of the arapaima scales and examine the functions of the different layers, focusing on the mechanical behavior, including tension and penetration of the scales, with and without the highly mineralized outer layer. We show that the fracture of the mineral and the stretching, rotation and delamination of collagen fibrils dissipate a significant amount of energy prior to catastrophic failure, providing high toughness and resistance to penetration by predator teeth. We show that the arapaima's scale has evolved to minimize damage from penetration by predator teeth through a Bouligand-like arrangement of successive layers, each consisting of parallel collagen fibrils with different orientations. This inhibits crack propagation and restricts damage to an area adjoining the penetration. The flexibility of the lamellae is instrumental to the redistribution of the compressive stresses in the underlying tissue, decreasing the severity of the concentrated load produced by the action of a tooth. The experimental results, combined with small-angle X-ray scattering characterization and molecular dynamics simulations, provide a complete picture of the mechanisms of deformation, delamination and rotation of the lamellae during tensile extension of the scale. PMID:24816264

  9. Energy source in the developing eggs of the Indian horseshoe crab, Tachypleus gigas (Muller)

    Digital Repository Service at National Institute of Oceanography (India)

    Chatterji, A.; Aguiar, Q.; Saldanha, C.

    Wet weight, dry weight, water content, ash weight, soluble and insoluble proteins, carbohydrates, lipids, and glycogen were determined from 0 to 40th day after fertilization of the developing eggs of the Indian horseshoe crab, Tachypleus gigas...

  10. Feeding behaviour and food selection in the horseshoe crab, Tachypleus gigas (Muller)

    Digital Repository Service at National Institute of Oceanography (India)

    Chatterji, A; Mishra, J.K.; Parulekar, A

    The Indian horseshoe crab, Tachypleus gigas, is a benthic feeder which subsists mainly on molluscs, decayed organic matter and polychaetes, in order of prevalence. A strong and positive preference was recorded for molluscs over other food organisms...

  11. Spawning migration of the horseshoe crab, Tachypleus gigas (Muller), in relation to lunal cycle

    Digital Repository Service at National Institute of Oceanography (India)

    Chatterji, A.; Rathod, V.; Parulekar, A.H.

    Effects of lunar phases and tidal height on the spawning migration of the horseshoe crab, Tachypleus gigas, along the northeastern coast of India were studied. Mature pairs of crabs migrate towards the shore and build their nests in sandy beaches...

  12. The biology and ecology of the jumbo squid Dosidicus gigas (Cephalopoda) in Chilean waters: a review

    OpenAIRE

    Christian M Ibáñez; Roger D Sepúlveda; Patricio Ulloa; Friedemann Keyl; M. CECILIA PARDO-GANDARILLAS

    2015-01-01

    ABSTRACT. The jumbo squid Dosidicus gigas is the most abundant cephalopod species in the southeastern Pacific Ocean, which supports the biggest cephalopod fishery in the world. Due to its growing economic importance, the population growth and distributional expansion of this squid is being increasingly studied. Nevertheless, some basic features of the biology of D. gigas are still unknown or have been poorly investigated. In this review we summarize the known information regarding the biology...

  13. Giga-View. A distributed gigapixel image viewer controlled by mobile devices

    OpenAIRE

    Kristoffersen, Einar

    2015-01-01

    This thesis presents Giga-View, a gigapixel image viewer controllable from mobile devices. It's design makes interaction available through a web browser and requires no software installation or high processing power from the device being used. Fulfilling the goal of high throughput and low latency, Giga-View is capable of processing an input stream with the frame rate of 60 frames per second, without any noticeable delay being built up. The amount of data being processed each second correspon...

  14. Mitochondrial genome of the endangered marine gastropod Strombus gigas Linnaeus, 1758 (Mollusca: Gastropoda).

    Science.gov (United States)

    Márquez, Edna J; Castro, Erick R; Alzate, Juan F

    2016-01-01

    The queen conch Strombus gigas is an endangered marine gastropod of significant economic importance across the Greater Caribbean region. This work reports for the first time the complete mitochondrial genome of S. gigas, obtained by FLX 454 pyrosequencing. The mtDNA genome encodes for 13 proteins, 22 tRNAs and 2 ribosomal RNAs. In addition, the coding sequences and gene synteny were similar to other previously reported mitogenomes of gastropods. PMID:25186797

  15. Initial Data of Digital Correlation ECE with a Giga Hertz Sampling Digitizer

    Science.gov (United States)

    Tsuchiya, Hayato; Inagaki, Shigeru; Tokuzawa, Tokihiko; Nagayama, Yoshio

    2015-03-01

    The proposed Digital Correlation ECE (DCECE) technique is applied in Large Helical Device. DCECE is realized by the use of the Giga Hertz Sampling Digitizer. The waveform of intermediate frequency band of ECE, whose frequency is several giga hertz, can be discretized and saved directly. The discretized IF data can be used for the analysis of correlation ECE with arbitrary parameter of spatial resolution and temporal resolution. In this paper, the characteristic of DCECE and initial Data in LHD is introduced.

  16. EFFECTS OF BU GU ZHI(PSORALEA CORYLIFOLIA L) AND BAI ZHI (DAHURIAN ANGELICA ROOT) EXTRACTS ON MELANOCYTE ADHESION AND MIGRATION

    Institute of Scientific and Technical Information of China (English)

    Ma Huiqun; Feng Jie; Zhang Xianqi; Mu Kuanhou; Liu Chao; Niu Xinwu; Dang Qianli

    2005-01-01

    Objective To find direct effect of Chinese herbs Bu Gu Zhi (Psoralea corylifolia L) and Bai Zhi (Dahurian angelica root) Extracts on melanocyte adhesion and migration in vitro. Methods Ethanol extracts obtained from two kind of Chinese medicinable herbs were tested. Human melanocytes were obtained from neonatal foreskins and 48-well culture dish covered with fibronectin were used to perform melanocyte adhesion assay; Motility was assessed using the micropore filter method. Results: The extracts of Bu Gu Zhi(Psoralea corylifolia L), Bai Zhi(Dahurian angelica root) obviously showed an effect in increasing of human melanocyte adhesion and migration on fibronectin. Conclusion It is suggested that Buguzhi(Fructus Psoraleae) and Baizhi(Radix Angelicae Dahuricae) might induce melanocyte adhesion and/or migration in the treatment of vitiligo.

  17. Virtual Evaluation on the Activities of Phthalides and Terpenoids from Angelica sinensis

    Institute of Scientific and Technical Information of China (English)

    PEI Yuan; TAN Chu-bing; XU Wei-ren; LIU Peng; LIU Bing-ni; LIU Wei; CHEN Cheng-lung; TANG Li-da

    2010-01-01

    Objective To elucidate potential activities of phthalides and terpenoids from Angelica sinensis by theoreticaldocking calculation.Methods Eleven components of phthalides and terpenoids were selected as ligand.Thecrystalline structures of targets related to common diseases were used as the receptors for calculation.Thecalculations were conducted with Schr(o)dinger software package.The grading standard of selectivity was developedaccording to G-score between ligands and receptors.Results Selective targets of phthalides and terpenoids wererelated to nevous system diseases,cancer,pain,diabetes,cardiovascular disease,liver cirrhosis,nephrotic syndrome,inflammatory diseases,rheumatoid arthritis,dermatosis,leukemia,microbial inflections,immune diseases,andhypercholesterolemia.In addition to the medical treatments reported in the literature,our research also indicated thatthese two classes of compounds may be used for tumor,diabetes,rheumatoid arthritis,dermatosis,leukemia,livercirrhosis,and nephrotic syndrome.According to our research,the effects of phthalides and terpenoids may be not sostrong.Conclusion The effects of phthalides and terpenoids on diseases founded through virtual evaluation accord greatly with those reported in experiment and clinic.The combination of computer-aided drug evaluation technique and experiment is definitely an important and fast way to investigate the effects and mechanisms of traditional Chinese medicine.

  18. Interaction between Z-ligustilide from Radix Angelica sinensis and human serum albumin.

    Science.gov (United States)

    Chen, Tingting; Zhu, Xiting; Chen, Qi; Ge, Ming; Jia, Xueping; Wang, Xiang; Ge, Cunwang

    2015-11-01

    Z-ligustilide (LIG), an essential oil extract from Radix Angelica sinensis, has broad pharmaceutical applications in treating cardiovascular and cerebrovascular diseases. Interaction of LIG with the major transport protein of human blood circulation, human serum albumin (HSA) has been investigated by steady-state, UV-vis and circular dichroism (CD) spectroscopic methods, as well as the effect of metal ions (e.g. Zn(2+), Cu(2+), Fe(3+), Co(2+), Ni(2+)) on the LIG-HSA system. Fluorescence results revealed that a moderate binding affinity (1.59 × 10(4) M(-1) at 298 K) between LIG and HSA with a 1:1 stoichiometry. Thermodynamic analysis of the binding data (ΔS = +12.96 J mol(-1) K(-1) and ΔH =- 20.11 kJ mol(-1)) suggested the involvement of hydrophobic and van der Waals forces, as well as hydrogen bonding in the complex formation. The specific binding distance r (3.75 nm) between donor (Trp-214) and acceptor (LIG) was obtained according to fluorescence resonance energy transfer. CD results showed that slight conformational changes occurred in the protein upon complexation with LIG. PMID:25976824

  19. Bioactive Peptides from Angelica sinensis Protein Hydrolyzate Delay Senescence in Caenorhabditis elegans through Antioxidant Activities

    Directory of Open Access Journals (Sweden)

    Qiangqiang Wang

    2016-01-01

    Full Text Available Since excessive reactive oxygen species (ROS is known to be associated with aging and age-related diseases, strategies modulating ROS level and antioxidant defense systems may contribute to the delay of senescence. Here we show that the protein hydrolyzate from Angelica sinensis was capable of increasing oxidative survival of the model animal Caenorhabditis elegans intoxicated by paraquat. The hydrolyzate was then fractionated by ultrafiltration, and the antioxidant fraction (<3 kDa was purified by gel filtration to obtain the antioxidant A. sinensis peptides (AsiPeps, which were mostly composed of peptides with <20 amino acid residues. Further studies demonstrate that AsiPeps were able to reduce the endogenous ROS level, increase the activities of the antioxidant enzymes superoxide dismutase and catalase, and decrease the content of the lipid peroxidation product malondialdehyde in nematodes treated with paraquat or undergoing senescence. AsiPeps were also shown to reduce age pigments accumulation and extend lifespan but did not affect the food-intake behavior of the nematodes. Taken together, our results demonstrate that A. sinensis peptides (AsiPeps are able to delay aging process in C. elegans through antioxidant activities independent of dietary restriction.

  20. Serotonergic activity-guided phytochemical investigation of the roots of Angelica sinensis.

    Science.gov (United States)

    Deng, Shixin; Chen, Shao-Nong; Yao, Ping; Nikolic, Dejan; van Breemen, Richard B; Bolton, Judy L; Fong, Harry H S; Farnsworth, Norman R; Pauli, Guido F

    2006-04-01

    Serotonin receptor (5-HT(7)) binding assay-directed fractionation of a methanol extract of the dried roots of Angelica sinensis led to the isolation and identification of 21 compounds including a new phenolic ester, angeliferulate (1), and three new phthalides, 10-angeloylbutylphthalide (2), sinaspirolide (3), and ansaspirolide (4), along with 17 known compounds, p-hydroxyphenethyl trans-ferulate (5), Z-ligustilide (6), Z-butylidenephthalide (7), senkyunolide I (8), Z-6-hydroxy-7-methoxydihydroligustilide (9), N-butylbenzenesulfonamide (10), 11(S),16(R)-dihydroxyoctadeca-9Z,17-diene-12,14-diyn-1-yl acetate (11), (3R,8S)-falcarindiol (12), heptadeca-1-en-9,10-epoxy-4,6-diyne-3,8-diol (13), oplopandiol (14), 8-hydroxy-1-methoxy-, Z-9-heptadecene-4,6-diyn-3-one (15), imperatorin, ferulic acid, vanillin, stigmasterol, sucrose, and 1,3-dilinolenin. This is the first report of a sulfonamide (10) identified from a higher plant source, although its presence needs further investigation. Biosynthetic pathways for dimeric phthalides 3 and 4 are proposed. Compounds 5, 7, 11, 12, 15, and imperatorin exhibited affinity toward 5-HT(7) receptors in a competitive binding assay. PMID:16643021

  1. Inhibitory effects of Angelica pubescens f. biserrata on 5-lipoxygenase and cyclooxygenase.

    Science.gov (United States)

    Liu, J H; Zschocke, S; Reininger, E; Bauer, R

    1998-08-01

    Linoleic acid, osthol, osthenol and two polyacetylenes, falcarindiol and 11(S),16(R)-dihydroxyoctadeca-9Z,17-diene-12,14-diyn-1 -yl acetate were found to be the most active compounds responsible for the inhibitory activity of the dichloromethane extract of the roots of Angelica pubescens f. biserrata on 5-lipoxygenase (5-LO) and cyclooxygenase (COX-1) in vitro. They showed prominent inhibitory effect on 5-LO with IC50 values of 27.9 microM, 36.2 microM, 43.1 microM, 9.4 microM and 24.0 microM, respectively. Linoleic acid, osthenol, falcarindiol and 11(S), 16(R)-dihydroxyoctadeca-9Z,17-diene-12,14-diyn-1-yl acetate exhibited inhibitory activity on COX-1 with IC50 values of 13.3 microM, 64.3 microM, 66.0 microM and 73.3 microM. PMID:9741298

  2. [Cloning and tissue expression of 4-coumarate coenzyme A ligase gene in Angelica sinensis].

    Science.gov (United States)

    Wen, Sui-chao; Wang, Yin-quan; Luo, Jun; Xia, Qi; Fan, Qin; Li, Shu-nan; Wang, Zhen-heng

    2015-12-01

    4-coumarate coenzyme A ligase is a key enzyme of phenylpropanoid metabolic pathway in higher plant and may regulate the biosynthesis of ferulic acid in Angelica sinensis. In this study, the homology-based cloning and rapid amplification of cDNA ends (RACE) technique were used to clone a full length cDNA encoding 4-coumarate coenzyme A ligase gene (4CL), and then qRT-PCR was taken for analyzing 4CL gene expression levels in the root, stem and root tissue at different growth stages of seedlings of A. sinensis. The results showed that a full-length 4CL cDNA (1,815 bp) was obtained (GenBank accession number: KT880508) which shares an open reading frame (ORF) of 1 632 bp, encodes 544 amino acid polypeptides. We found 4CL gene was expressed in all tissues including leaf, stem and root of seedlings of A. sinensis. The expressions in the leave and stem were increased significantly with the growth of seedlings of A. sinensis (P space pattern of 4CL gene expression in seedlings of A. sinensis. These findings will be useful for establishing an experiment basis for studying the structure and function of 4CL gene and elucidating mechanism of ferulic acid biosynthesis and space-time regulation in A. sinensis. PMID:27245029

  3. Structural characterization and in vitro antitumor activity of an acidic polysaccharide from Angelica sinensis (Oliv.) Diels.

    Science.gov (United States)

    Zhang, Yu; Zhou, Tao; Wang, Hongjing; Cui, Zheng; Cheng, Fang; Wang, Kai-Ping

    2016-08-20

    A water-soluble polysaccharide extracted from the roots of Angelica sinensis (Oliv.) Diels, which is a traditional Chinese medicine herb, was fractioned and purified by Sephadex G-50 gel filtration chromatography. The structural characterization and antitumor activities of the purified polysaccharide fraction, named as ASP, were evaluated in the present study. ASP, which molecular weight was determined to be 80kDa by high-performance gel-permeation chromatography, is an acidic heteropolysaccharide consisting of glucuronic acid, glucose, arabinose and galactose in ratio of 1.00:1.70:1.85:5.02. It has a backbone composed of (1→3)-linked Galp, (1→6)-linked Galp and 2-OMe-(1→6)-linked Galp with three branches attached to O-3 of 2-OMe-(1→6)-linked Galp and terminated with GlcpA and Araf, and all of Araf and the majority of Glcp are distributed in branches. Moreover, all of GlcpA were presented as (1→)-linked GlcpA in branches. In in vitro antitumor assays, ASP displayed cytotoxicity against HepG2 cells (34.32±3.50% at the concentration of 1mg/mL) and MCF-7 cells (28.90±1.50% at the concentration of 1mg/mL) in a dose-dependent manner, and ASP also showed mild inhibitory activity against A549 cells. PMID:27178946

  4. Angelica sinensis Improves Exercise Performance and Protects against Physical Fatigue in Trained Mice

    Directory of Open Access Journals (Sweden)

    Tzu-Shao Yeh

    2014-03-01

    Full Text Available Angelica sinensis (AS is a well-known medicinal herb and food material with antioxidative and multifunctional pharmacological activities. However, we lack evidence of the effect of AS on exercise performance and physical fatigue. We aimed to evaluate the potential beneficial effect of AS on ergogenic and anti-fatigue functions after physiological challenge. Male ICR strain mice were randomly assigned to four groups (n = 10 per group for treatment: (1 sedentary control and vehicle treatment (vehicle control; (2 exercise training with vehicle treatment (exercise control; (3 exercise training with AS treatment at 0.41 g/kg/day (Ex-AS1; and (4 2.05 g/kg/day (Ex-AS5; both the vehicle and AS were orally administered for 6 weeks. Exercise performance and anti-fatigue function were evaluated by forelimb grip strength, exhaustive swimming time, and levels of serum lactate, ammonia, glucose, and creatine kinase (CK after a 15-min swimming exercise. Trend analysis revealed that AS treatments significantly increased endurance swimming time and blood glucose level, and decreased serum lactate, ammonia and CK levels. Liver and muscle glycogen contents were higher for Ex-AS1 and Ex-AS5 groups than the exercise control. Therefore, AS supplementation improved exercise performance and had anti-fatigue properties in mice and may be an effective ergogenic aid in exercise training.

  5. Extraction of Angelica sinensis polysaccharides using ultrasound-assisted way and its bioactivity.

    Science.gov (United States)

    Zhao, Ying; Shi, Yongyong; Yang, Huixin; Mao, Lijuan

    2016-07-01

    In the present article, ultrasound-assisted extraction (UAE) of polysaccharides from Angelica sinensis were investigated. The aim of the study is to examine the extraction parameters such as ultrasound power (140-180W), the ratio of liquid to solid (5-7), extraction time (40-50min) and extraction temperature (80-100°C) and to obtain the best possible combinations of these parameters through response surface methodology (RSM). Based on contour plots and variance analysis, optimum operational conditions for maximizing polysaccharides yield were found to be 180w, 7, 45min and 90°C. Under the optimum operating conditions determined, 6.96% polysaccharides were achieved. In addition, the results showed that A. sinensis polysaccharides (ASP) could increase antioxidant enzymes activities and decrease the MDA levels in the skeletal muscle of exhaustive exercise rats. This study provides strong evidence that A. sinensis polysaccharides supplementation possessed protective effects against exhaustive exercise-induced oxidative stress. PMID:26845475

  6. Structural analysis and immunoregulation activity comparison of five polysaccharides from Angelica sinensis.

    Science.gov (United States)

    Wang, Junmin; Ge, Beilei; Li, Zihong; Guan, Fangxia; Li, Feifei

    2016-04-20

    Four fractional polysaccharides (CAPS30, CAPS50, CAPS70 and CAPS80) and total polysaccharides (CAPSt) were obtained from Angelica sinensis. Their structures were identified by Fourier transform-infrared spectroscopy (FT-IR), molecular weights were evaluated by high performance gel permeation chromatography (HPGPC) and compositions were analyzed by gas chromatography-mass spectrometry (GC-MS). Their immunoregulation activities were further compared in vitro. The results showed that they displayed different structural features and immuno-enhancement activities. They all could cause the proliferation of the lymphocyte, up-regulate stimulate the productions of IFN-γ, IL-2, IL-6 and TNF-α secretion in the peripheral lymphocytes. Further experiments showed that CAPS50 and CAPS70 could increase the ratio of CD3(+)CD56(+) cells to some extent. These indicated that five CAPSs displayed different activities which were associated with their different structural characteristics and CAPS70, with the molecular weights of 20.82kDa and consisting of mannose and glucose in the molar ratio of 1.20:1.01, possessed the strongest immuno-enhancement activity. PMID:26876821

  7. Distinguishing Radix Angelica sinensis from different regions by HS-SFME/GC-MS.

    Science.gov (United States)

    Tan, Hong-Sheng; Hu, Dong-Dong; Song, Jing-Zheng; Xu, Yong; Cai, Shuang-Fan; Chen, Qi-Long; Meng, Qian-Wan; Li, Song-Lin; Chen, Shi-Lin; Mao, Qian; Xu, Hong-Xi

    2015-11-01

    An automated headspace solvent free microextraction (HS-SFME) based gas chromatography/mass spectrometry (GC/MS) was developed for discrimination of Radix Angelica sinensis (RAS) from different cultivation regions. The MS data were subjected to principal component analysis (PCA) and hierarchical clustering analysis (HCA) to rapidly find the potential characteristic components of RAS from top-geoherb region and non top-geoherb region. Totally, fifty-one volatile organic compounds (VOCs) were identified, in which β-ocimene, α-pinene, 3-methylbutanal, heptanes, butanal were identified as potential markers for distinguishing RAS from top-geoherb region and non top-geoherb region. Sulphur dioxide was detected in some commercial RAS samples, which implied that sulphur-fumigation might be the main reason for the quality inconsistencies of commercial RAS samples. These results suggested that RAS from top-geoherb region and non-top geoherb region could be discriminated by the method. And characteristic chemical markers found in current study can be used for ensuring consistent quality of top-geoherb of RAS. PMID:25976811

  8. Habitat suitability and conservation of the Giant Gartersnake (Thamnophis gigas) in the Sacramento Valley of California

    Science.gov (United States)

    Halstead, B.J.; Wylie, G.D.; Casazza, M.L.

    2010-01-01

    Resource managers often have little information regarding the habitat requirements and distribution of rare species. Factor analysis-based habitat suitability models describe the ecological niche of a species and identify locations where these conditions occur on the landscape using existing occurrence data. We used factor analyses to assess the suitability of habitats for Thamnophis gigas (Giant Gartersnake), a rare, threatened species endemic to the Central Valley of California, USA, and to map the locations of habitat suitable for T. gigas in the Sacramento Valley. Factor analyses indicated that the niche of T. gigas is composed of sites near rice agriculture with low stream densities. Sites with high canal densities and near wetlands also appeared suitable, but results for these variables were sensitive to potential sampling bias. In the Sacramento Valley, suitable habitats occur primarily in the central portion of the valley floor. Based upon the results of the factor analyses, recovery planning for T. gigas will require an on-the-ground assessment of the current distribution and abundance of T. gigas, maintaining the few remaining natural wetlands and the practice of rice agriculture in the Sacramento Valley, and studying the effects of agricultural practices and land use changes on populations of T. gigas. ?? 2010 by the American Society of Ichthyologists and Herpetologists.

  9. Selective breeding to improve resistance against summer mortality in the Pacific oyster Crassostrea gigas : results after 3 generations

    OpenAIRE

    Boudry, Pierre; Degremont, Lionel; Bedier, Edouard; Samain, Jean-francois

    2004-01-01

    Summer mortality of adults and juveniles has been reported in the Pacific oyster, Crassostrea gigas, for many years and in several countries. The French multidisciplinary program "Morest" aims to investigate the causes of the summer mortality in Crassostrea gigas. Within this program, we designed multi-site field experiments to assess to what extent genetic variability exists for summer mortality in French populations of C. gigas and to determine whether selective breeding could improve survi...

  10. Adult Pacific Oyster (Crassostrea gigas) May Have Light Sensitivity.

    Science.gov (United States)

    Wu, Changlu; Wang, Jiao; Yang, Yanjian; Li, Zhuang; Guo, Ting; Li, Yongchuan; Wang, Xiaotong

    2015-01-01

    Light-sensitivity is an important aspect of mollusk survival as it plays a vital role in reproduction and predator avoidance. In the Pacific oyster Crassostrea gigas light sensitivity has been demonstrated in the larval stage but has not yet been conclusively demonstrated in adult oysters. In this paper we describe an experiment which was undertaken to determine if adult Pacific oysters were sensitive to light. One LED flashlight was used to shine light onto adult oysters while they were filtering seawater through their shell openings. We found that the degree of opening increased gradually during the light period but rapidly decreased when the flashlight was turned off in the treated group but not in the control group. These results suggest that adult Pacific oyster may be sensitive to light. PMID:26474058

  11. GigaGauss magnetic fields in under-dense plasma

    CERN Document Server

    Lecz, Zsolt; Seryi, Andrei; Andreev, Alexander

    2016-01-01

    Magnetic fields have a crucial role in physics at all scales, from synchrotrons and laser-driven plasma accelerators to astrophysics and nanotechnology. Large field strengths, beside the guiding of relativistic particles along a shorter curvature, allows the investigation of material in extreme conditions existing only in exotic astro-objects like neutron stars or pulsars. Here we propose a method for generating magnetic field on the GigaGauss level in under-dense plasma using high intensity laser pulses with azimuthally non-uniform intensity distribution. The interaction is studied with the help of three-dimensional particle-in-cell plasma simulation code. Beside the standard wake-field and bubble generation, such laser beam induces the rotational motion of electrons at the edge of evacuated plasma region. The combined axial magnetic and electric fields form a compact source of both high frequency radiation, due to coherent synchrotron emission, and low emittance, high density relativistic electron bunches. ...

  12. Impact and fracture analysis of fish scales from Arapaima gigas.

    Science.gov (United States)

    Torres, F G; Malásquez, M; Troncoso, O P

    2015-06-01

    Fish scales from the Amazonian fish Arapaima gigas have been characterised to study their impact and fracture behaviour at three different environmental conditions. Scales were cut in two different directions to analyse the influence of the orientation of collagen layers. The energy absorbed during impact tests was measured for each sample and SEM images were taken after each test in order to analyse the failure mechanisms. The results showed that scales tested at cryogenic temperatures display fragile behaviour, while scales tested at room temperature did not fracture. Different failure mechanisms have been identified, analysed and compared with the failure modes that occur in bone. The impact energy obtained for fish scales was two to three times higher than the values reported for bone in the literature. PMID:25842120

  13. 音箱创新Giga Works T20 SeriesⅡ

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    小体积也能重低音:Giga Works T20SeriesⅡ是一款拥有独特设计的2.0音箱,其2.5英寸低音扬声器振膜由锥形玻璃纤维编织制成,不会受温度和湿度的影响,在不同环境中可保持统一的音质表现。其高频扬声器使用了1英寸的丝膜球顶扬声器,可以展现清晰的高音。

  14. Historical biogeography of the Angelica group (Apiaceae tribe Selineae) inferred from analyses of nrDNA and cpDNA sequences

    Institute of Scientific and Technical Information of China (English)

    Chen-Yang LIAO; Stephen R.DOWNIE; Yan YU; Xing-Jin HE

    2012-01-01

    Biogeographical patterns and diversification processes of Asia-centered angiosperm groups have been significantly affected by the multistage uplift of the Himalayas-Tibetan Plateau since the Late Tertiary.The divergence time of the largely East Asian Angelica group (Apiaceae,subfamily Apioideae,tribe Selineae) was initially analyzed using BEAST and nrDNA internal transcribed spacer sequence data from 96 representatives of tribe Selineae and relatives.Further analyses of the biogeographical history of the Angelica group were carried out using BEAST,S-DIVA,RASP,and LAGRANGE on datasets containing all or some of the following loci:nrDNA internal and external transcribed spacers; cpDNA rps16 intron; and cpDNA rps16-trnK,rpl32-trnL,and trnL-trnT intergenic spacers.The results suggested that the Angelica group was originally present in the East Palearctic during the global cooling of the late Middle Miocene (13.6 Mya) and that the Angelica s.s.clade originated in the same region at 10.2Mya.Subsequent diversifications of the Angelica s.s.clade intensified in the East Palearctic during the middle Late Miocene (10.0-7.0 Mya) and in the eastern Himalayan Zone during the late Pliocene and Pleistocene (<4.0Mya).These diversifications likely corresponded with plateau uplift-driven climatic changes.Considering elevational reconstructions,the differential responses to altitude appear to be the primary factor explaining the recent radiation of the group in the eastern Himalayas.The North American species of the Angelica group were retrieved as polyphyletic and their migrations involved six independent dispersals to North America at least since the middle Late Miocene,including four times from northeast Asia and twice from Europe.

  15. Down-regulation of NF-κB DNA binding activity by Angelica Sinensis to ameliorate radiation-induced pulmonary injury in mouse model

    International Nuclear Information System (INIS)

    Objective: To study the trend of NF-kB binding activity during the course of radiation-induced pulmonary injury (RPI), and to evaluate the intervention effect of Angelica Sinensis on it. Methods: Adult female C57BL/6J mice were randomly divided into 4 groups: blank control group (N group), Angelica Sinensis control group (A group), irradiation group (NX group) and irradiation group with Angelica Sinensis intervention (AX group). All mice from the NX and AX groups underwent single fraction of 12 Gy γ-ray delivered to the whole thorax. All mice were intraperitoneally injected 25% Angelica Sinensis injection (20 ml/kg) or identical volume Normal Sodiumdaily injection initiated 1 week before irradiation, lasted till 2 weeks after irradiation. Mice were sacrificed at designated time points (1, 24, 72 h, 1, 2, 4, 8, 16 and 24 weeks), and the whole lungs were removed freshly. HE and Masson staining were performed to provide histopathologic evidence and to evaluate the collagen deposit situation respectively. The immunohistochemical staining of NF-κB P65 protein was performed to identify the location as well as the relative content of P65 protein. The DNA binding activity of NF-κB was detected by TransAMTM ELISA assay. Results: HE and Masson staining manifested that visible pathological alterations began at 2 weeks, typical interstitial pneumonitis were showed at 4 and 8 weeks, collagen deposition was visible from 16 weeks. The NF-κB binding activity detection and the immunohistochemical half-quantity analysis showed two-phase elevation, at 24 h and 8 weeks. Preventive application of Angelica Sinensis revealed prominently ameliorative effect for RPI, with pathological improvement, decreased immunohistochemical staining and lower NF-κB binding activity in both peaks. Conclusions: During the development process of RPI, NF-κB binding activity shows two-phase elevation. Chinese medicine Angelica Sinensis can down-regulate the elevation, showing noted ameliorative effect

  16. EFFECTS OF RADIX ANGELICAE SINENSIS AND SHUANGHUANGLIAN ON A RAT MODEL OF CHRONIC PSEUDOMONAS AERUGINOSA PNEUMONIA

    Institute of Scientific and Technical Information of China (English)

    H.K.Johansen; C.Moser; V.Faber; A.Khamzmi; J.Rygaard; N.Hφiby; Z.J.Song

    2000-01-01

    Objective. To study the effects of two kinds of Chinese herbal medicine, Radix angelicae sinensis(RAS) (当归)and Shuanghuanglian(SHL)(双黄连) on chronic Pseudomortas aerug/nosa(PA)lung infection in a rat model mimicking cystic fibrosis(CF).Methods. Rats were divided into RAS, SIlL and control groups. All rats were challenged intratracheally with alginate embedded PA and the trealments with herbal medicine started on the same day of challenge. The drugs were administered subcutaneously once a day for ten days and the control group was treated with sterile saline. The rats were sacrificed two weeks after challenge. Results. Significantly improved lung bacterial clearance(P <0.05, P < 0.01) and milder macroecopic lung pathology (P<0.005) were found in the two treated groups compared to the control group. In tbe SHL treated group, the neutrophil percent in the peripheral blood leukocytes(P < 0.05), the anti-PA IgG level in serum (P < 0.05), the incidence of lung abscesses(P < 0.005) and the incidence of acnte lung inflammafion(P < 0.05) were signitlcanfly lower than in the control group. The RAS treatment reduced fever(P < 0.05), decreased the incidence of lung abscesses(P <0.005) and lung mast cell number (P< 0.05), and lowered anti-PA IgG1 level in serum(P< 0.05) when compared to the control group. The anti-PA bacterial activity test in SHL was weakly positive whereas in RAS it was negative. Conclusion. The treatment with both herbal medicines could increase the resistance of the rats against PA lung infection and they therefore might be potential premising drugs for stimulation of the immtme system in CF patients with chronic PA lung infection.

  17. Optimization of induction, subculture conditions, and growth kinetics of Angelica sinensis (Oliv. Diels callus

    Directory of Open Access Journals (Sweden)

    Bing Huang

    2015-01-01

    Full Text Available Background: Angelica sinensis (Oliv. Diels is an important traditional Chinese medicine, and the medicinal position is its root. This perennial herb grows vigorously only in specific areas and the environment. Tissue culture induction of callus and plant regeneration is an important and effective way to obtain large scale cultures of A. sinensis. Objective: The objective was to optimize the inductive, subculture conditions, and growth kinetics of A. sinensis. Materials and Methods: Tissue culture conditions for A. sinensis were optimized using leaves and petioles (types I and II as explants source. Murashige and Skoog (MS and H media supplemented with 30 g/L sucrose, 7.5 g/L agar, and varying concentrations of plant growth regulators were used for callus induction. In addition, four different basal media supplemented with 1.0 mg/L 2,4 dichlorophenoxy acetic acid (2,4 D, 0.2 mg/L 6 benzyladenine (BA and 30 g/L sucrose were optimized for callus subculture. Finally, growth kinetics of A. sinensis cultured on different subculture media was investigated based on callus properties, including fresh weight, dry weight, medium pH, callus relative fresh weight growth, callus relative growth rate (CRGR, and sucrose content. Results: MS medium supplemented with 5 mg/L α-naphthaleneacetic acid, 0.5 mg/L BA, 0.7 mg/L 2,4 D, 30 g/L sucrose and 7.5 g/L agar resulted in optimal callus induction in A. sinensis while petiole I was found as the best plant organ for callus induction. The B5 medium supplemented with 1.0 mg/L 2,4 D, 0.2 mg/L BA and 30 g/L sucrose displayed the best results in A. sinensis callus subculture assays. Conclusion: The optimized conditions could be one of the most potent methods for large scale tissue culture of A. sinensis.

  18. GaN Initiative for Grid Applications (GIGA)

    Energy Technology Data Exchange (ETDEWEB)

    Turner, George [MIT Lincoln Lab., Lexington, MA (United States)

    2015-07-03

    For nearly 4 ½ years, MIT Lincoln Laboratory (MIT/LL) led a very successful, DoE-funded team effort to develop GaN-on-Si materials and devices, targeting high-voltage (>1 kV), high-power, cost-effective electronics for grid applications. This effort, called the GaN Initiative for Grid Applications (GIGA) program, was initially made up of MIT/LL, the MIT campus group of Prof. Tomas Palacios (MIT), and the industrial partner M/A Com Technology Solutions (MTS). Later in the program a 4th team member was added (IQE MA) to provide commercial-scale GaN-on-Si epitaxial materials. A basic premise of the GIGA program was that power electronics, for ubiquitous utilization -even for grid applications - should be closer in cost structure to more conventional Si-based power electronics. For a number of reasons, more established GaN-on-SiC or even SiC-based power electronics are not likely to reach theses cost structures, even in higher manufacturing volumes. An additional premise of the GIGA program was that the technical focus would be on materials and devices suitable for operating at voltages > 1 kV, even though there is also significant commercial interest in developing lower voltage (< 1 kV), cost effective GaN-on-Si devices for higher volume applications, like consumer products. Remarkable technical progress was made during the course of this program. Advances in materials included the growth of high-quality, crack-free epitaxial GaN layers on large-diameter Si substrates with thicknesses up to ~5 μm, overcoming significant challenges in lattice mismatch and thermal expansion differences between Si and GaN in the actual epitaxial growth process. Such thick epilayers are crucial for high voltage operation of lateral geometry devices such as Schottky barrier (SB) diodes and high electron mobility transistors (HEMTs). New “Normally-Off” device architectures were demonstrated – for safe operation of power electronics circuits. The trade-offs between lateral and

  19. Multi-component analysis in sun-dried and sulfur-fumigated Angelicae Sinensis Radix by single marker quantitation and chemometric discrimination

    Directory of Open Access Journals (Sweden)

    Yajing Lou

    2014-01-01

    Full Text Available Background: A new method has been developed for the simultaneous determination of ferulic acid, senkyunolide A, and Z-ligustilide in Angelicae Sinensis Radix before and after sulfur-fumigation using quantitative analysis of multi-components by a single marker (QAMS. Materials and Methods: The feasibility and accuracy of QAMS were checked by the external standard method, and various high-performance liquid chromatographic instruments and chromatographic conditions were investigated to verify its applicability. Using ferulic acid as the internal reference substance, and the contents of senkyunolide A and Z-ligustilide were calculated according to relative correction factors by high-performance liquid chromatography. Meanwhile, the influence of sulfur-fumigation on these chemical components in Angelicae Sinensis Radix were evaluated and discriminated by chromatographic fingerprint and chemometrics. Results: There was no significant difference observed between the QAMS method and the external standard method. Furthermore, sulfur-fumigation reduced the contents of ferulic acid, senkyunolide A, and Z-ligustilide in Angelicae Sinensis Radix by some degree, and the sun-drying and sulfur-fumigation processing could be easily discriminated by chromatographic fingerprint and chemometrics. Conclusion: QAMS is a convenient and accurate approach to analyzing multi-component when reference substances are unavailable, simultaneously, chemometrics is an effective way to discriminate sun-dried and sulfur-fumigated Angelicae Sinensis Radix.

  20. The GigaFitter: Performance at CDF and Perspectives for Future Applications

    Science.gov (United States)

    Amerio, S.; Annovi, A.; Bettini, M.; Bucciantonio, M.; Catastini, P.; Crescioli, F.; Dell'Orso, M.; Giannetti, P.; Lucchesi, D.; Nicoletto, M.; Piendibene, M.; Volpi, G.

    2010-04-01

    The Silicon Vertex Trigger (SVT) is a processor developed at CDF experiment to perform online fast and precise track reconstruction. SVT is made of two pipelined processors, the Associative Memory, finding low precision tracks, and the Track Fitter, refining the track quality whith high precision fits. We will describe the architecture and the performances of a next generation track fitter, the GigaFitter, developed to reduce the degradation of the SVT efficiency due to the increasing instantaneous luminosity. The GigaFitter reduces the track parameter reconstruction to a few clock cycles and can perform many fits in parallel, thus allowing high resolution tracking at very high rate. The core of the GigaFitter is implemented in a modern Xilinx Virtex-5 FPGA chip, rich in powerful DSP arrays. The FPGA is housed on a mezzanine board which receives the data from a subset of the tracking detector and transfers the fitted tracks to a Pulsar motherboard for the final corrections. Instead of the current 12 boards, one per sector of the detector, the final system will be much more compact, consisting of a single GigaFitter Pulsar board equipped with four mezzanine cards receiving the data from the entire tracking detector. Moreover, the GigaFitter modular structure is adequate to scale for much better performances and is general enough to be easily adapted to future High Energy Physics (HEP) experiments and applications outside HEP.

  1. Phylogeny of forkhead genes in three spiralians and their expression in Pacific oyster Crassostrea gigas

    Science.gov (United States)

    Yang, Mei; Xu, Fei; Liu, Jun; Que, Huayong; Li, Li; Zhang, Guofan

    2014-11-01

    The Fox genes encode a group of transcription factors that contain a forkhead domain, which forms a structure known as a winged helix. These transcription factors play a crucial role in several key biological processes, including development. High-degree identity in the canonical forkhead domain has been used to divide Fox proteins into 23 families (FoxA to FoxS). We surveyed the genome of three spiralians, the oyster Crassostrea gigas, the limpet Lottia gigantea, and the annelid Capitella teleta. We identified 25 C. gigas fox genes, 21 L. gigantea fox genes, and 25 C. teleta fox genes. The C. gigas fox and L. gigantea fox genes represented 19 of the 23 families, whereas FoxI, Q1, R, and S were missing. The majority of the Fox families were observed within the C. teleta fox genes, with the exception of FoxR and S. In addition, the foxAB-like gene, foxY-like gene, and foxH gene were also present in the three genomes. The conserved FoxC-FoxL1 cluster, observed in mammals, was also found in C. gigas. The diversity of temporal expression patterns observed across the developmental process implies the C. gigas fox genes exert a wide range of functions. Further functional studies are required to gain insight into the evolution of Fox genes in bilaterians.

  2. Can the spread of non-native oysters (Crassostrea gigas) at the early stages of population expansion be managed?

    Science.gov (United States)

    Guy, Claire; Roberts, Dai

    2010-07-01

    The Pacific oyster (Crassostrea gigas) was introduced into Strangford Lough, Northern Ireland in the 1970s. It was assumed that local environmental conditions would not facilitate successful reproduction. However, in the 1990s there were reports of C. gigas outside licensed aquaculture sites and this investigation set out to ascertain the current distribution, years of likely recruitment and population structure of the species. C. gigas were found distributed widely throughout the northern basin during surveys; the frequency distribution suggesting C. gigas is not recruiting every year. Establishment of feral populations of C. gigas elsewhere have linked to habitat change. A pilot cull was initiated to assess the success rate of early intervention. This paper demonstrates the potential benefits of responding rapidly to initial reports of non-native species in a way that may curtail establishment and expansion. The method advocated in simple and can be recommended to the appropriate regulatory authorities. PMID:20189606

  3. The inhibitory role of γ-aminobutyric acid (GABA) on immunomodulation of Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Li, Meijia; Qiu, Limei; Wang, Lingling; Wang, Weilin; Xin, Lusheng; Li, Yiqun; Liu, Zhaoqun; Song, Linsheng

    2016-05-01

    γ-aminobutyric acid (GABA) is an inhibitory neurotransmitter to suppress the immune-mediated pro-inflammatory reactions, and it has been used in the treatment of many inflammation-related diseases in vertebrates, while its immunomodulatory role in invertebrates has never been reported. In the present study, GABA was found to exist in the hemolymph of Pacific oyster Crassostrea gigas, and its concentration decreased slightly from 8.00 ± 0.37 μmol L(-1) at normal condition to 7.73 ± 0.15 μmol L(-1) at 6 h after LPS stimulation, and then increased to 9.34 ± 0.15 μmol L(-1), 8.86 ± 0.68 μmol L(-1) at 12 h and 48 h, respectively. After LPS stimulation, the mRNA expressions of pro-inflammatory cytokines (CgIL-17 and CgTNF) and immune effectors (CgSOD and CgBPI), and the protein expression of NOS increased significantly, and these increased trends were remarkably inhibited by GABA stimulation. At the same time, the phagocytosis rate and apoptosis rate of immunocytes also increased obviously after LPS stimulation, whereas the increase was repressed with the addition of GABA. The results collectively demonstrated that GABA was an indispensable inhibitory agent for both humoral and cellular immune response, which mainly functioned at the late phase of immune response to avoid the excess immune reactions and maintain the immune homeostasis. PMID:26975413

  4. Terrestrial ecology of semi-aquatic giant gartersnakes (Thamnophis gigas)

    Science.gov (United States)

    Halstead, Brian J.; Skalos, Shannon M.; Wylie, Glenn D.; Casazza, Michael L.

    2015-01-01

    Wetlands are a vital component of habitat for semiaquatic herpetofauna, but for most species adjacent terrestrial habitats are also essential. We examined the use of terrestrial environments by Giant Gartersnakes (Thamnophis gigas) to provide behavioral information relevant to conservation of this state and federally listed threatened species. We used radio telemetry data collected 1995–2011 from adults at several sites throughout the Sacramento Valley, California, USA, to examine Giant Gartersnake use of the terrestrial environment. We found Giant Gartersnakes in terrestrial environments more than half the time during the summer, with the use of terrestrial habitats increasing to nearly 100% during brumation. While in terrestrial habitats, we found Giant Gartersnakes underground more than half the time in the early afternoon during summer, and the probability of being underground increased to nearly 100% of the time at all hours during brumation. Extreme temperatures also increased the probability that we would find Giant Gartersnakes underground. Under most conditions, we found Giant Gartersnakes to be within 10 m of water at 95% of observations. For females during brumation and individuals that we found underground, however, the average individual had a 10% probability of being located > 20 m from water. Individual variation in each of the response variables was extensive; therefore, predicting the behavior of an individual was fraught with uncertainty. Nonetheless, our estimates provide resource managers with valuable information about the importance of protecting and carefully managing terrestrial habitats for conserving a rare semiaquatic snake.

  5. Characteristic crystal orientation of folia in oyster shell, Crassostrea gigas

    International Nuclear Information System (INIS)

    The thin sheets of calcite, termed folia, that make up much of the shell of an oyster are composed of foliated lath. Folia of the giant Pacific oyster (Crassostrea gigas) were examined using TEM (transmission electron microscopy) and tested using microindentation and nanoindentation techniques. Analysis of the Kikuchi patterns obtained from the folia showed that there are two types (type I and type II) of preferred orientation, with an angle of around 70o between them. Nanoindentation tests showed that the folia exhibit a hardness of about 3 GPa and elastic modulus of about 73 GPa. Microcracks were generated using a microindenter in order to study the fracture mechanisms of the folia. Following on from these investigations, fracture mechanisms are discussed in conjunction with the correlation between preferred orientation and structural characteristics during cracking of the folia. Comparing the morphology and the polymorphism with nacre (also known as mother of pearl), the advantages of the relatively fast crystal growth and less amount of organic matrix in folia may have interesting implications for the development of sophisticated synthetic materials

  6. Characteristic crystal orientation of folia in oyster shell, Crassostrea gigas

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Seung Woo [Department of Chemical and Biomolecular Engineering, Sogang University, Seoul (Korea, Republic of); Kim, Gyeung Ho [Nano-Materials Reserch Center, Korea Institute of Science and Technology, Seoul (Korea, Republic of); Choi, Cheong Song [Department of Chemical and Biomolecular Engineering, Sogang University, Seoul (Korea, Republic of)], E-mail: cschoi@sogang.ac.kr

    2008-03-10

    The thin sheets of calcite, termed folia, that make up much of the shell of an oyster are composed of foliated lath. Folia of the giant Pacific oyster (Crassostrea gigas) were examined using TEM (transmission electron microscopy) and tested using microindentation and nanoindentation techniques. Analysis of the Kikuchi patterns obtained from the folia showed that there are two types (type I and type II) of preferred orientation, with an angle of around 70{sup o} between them. Nanoindentation tests showed that the folia exhibit a hardness of about 3 GPa and elastic modulus of about 73 GPa. Microcracks were generated using a microindenter in order to study the fracture mechanisms of the folia. Following on from these investigations, fracture mechanisms are discussed in conjunction with the correlation between preferred orientation and structural characteristics during cracking of the folia. Comparing the morphology and the polymorphism with nacre (also known as mother of pearl), the advantages of the relatively fast crystal growth and less amount of organic matrix in folia may have interesting implications for the development of sophisticated synthetic materials.

  7. Giga-bit optical data transmission module for Beam Instrumentation

    CERN Document Server

    Roedne, L T; Cenkeramaddi, L R; Jiao, L

    Particle accelerators require electronic instrumentation for diagnostic, assessment and monitoring during operation of the transferring and circulating beams. A sensor located near the beam provides an electrical signal related to the observable quantity of interest. The front-end electronics provides analog-to-digital conversion of the quantity being observed and the generated data are to be transferred to the external digital back-end for data processing, and to display to the operators and logging. This research project investigates the feasibility of radiation-tolerant giga-bit data transmission over optic fibre for beam instrumentation applications, starting from the assessment of the state of the art technology, identification of challenges and proposal of a system level solution, which should be validated with a PCB design in an experimental setup. Radiation tolerance of 10 kGy (Si) Total Ionizing Dose (TID) over 10 years of operation, Bit Error Rate (BER) 10-6 or better. The findings and results of th...

  8. IDENTIFICACIÓN MOLECULAR DE POBLACIONES BACTERIANAS ASOCIADAS AL CARACOL PALA (Strombus gigas DEL CARIBE COLOMBIANO

    Directory of Open Access Journals (Sweden)

    ROMERO MAGALLY

    2009-08-01

    Full Text Available RESUMEN

    El caracol Pala, Strombus gigas (Strombidae, es de gran importancia ecológica y socioeconómica en el área caribeña colombiana. Sin embargo, es una especie catalogada como “vulnerable” y existe muy poca información referente a las especies bacterianas asociadas al caracol que puedan ser importantes para el desarrollo, manejo productivo y de seguridad acuícola de estos gastrópodos. En este trabajo, nosotros empleamos un estudio microbiológico y molecular de la región intergénica entre los genes 16S y 23S rDNA, análisis del gen rDNA 16S y secuenciación, para analizar las bacterias asociadas al caracol Pala (S. gigas. La composición de bacterias cultivables asociadas fue evaluada por su capacidad para crecer en agar marino y en medios de cultivos selectivos. De un total de 28 muestras analizadas encontramos que el número de bacterias cultivadas en condiciones aerobias fue de alrededor 106 ufc mL-1 donde las bacterias pertenecientes a la familia Vibrionacea fueron las más abundantes, cerca de >105 ufc mL-1 . El análisis molecular de la región intergénica entre los genes 16S y 23S rDNA de las diferentes muestras, reveló una gran complejidad bacteriana asociada a S. gigas. Las secuencias de los amplificados del gen rDNA 16S identificó Pseudoalteromonas sp., Halomonas sp., Psycrobacter sp., Cobetia sp., Pseudomonas sp. y Vibrios sp. Nuestros resultados podrían sugerir un rol importante de estas bacterias como componentes de la comunidad asociada al S. gigas. Esta información puede complementar los estudios que se están implementando en los procesos para la conservación y repoblamiento de las poblaciones de S. gigas en Colombia.

    Palabras clave: Strombus gigas, Caracol pala, Bacteria, Región intergénica 16S-23S, rDNA 16S.

    ABSTRACT

    The Queen Conch, Strombus gigas (Strombidae, is a species of great ecological and socioeconomic importance in the Caribbean area of Colombia

  9. Study of D~0-D~0 mixing at a giga-Z linear collider

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The possibility of studying D 0-D 0 mixing at a giga-Z linear collider "Z factory" where 10 9 hadronic Z 0 decays can be accumulated is examined.We discuss the sensitivity for the measurements of neutral D mixing parameters.These results are compared to those attainable at B factories.We find that the typical decay length of the neutral D mesons at Z factory is about 10 times larger than that at B factory.In addition,the resolution of the vertex detector of a giga-Z factory is 2-3 times better than that of B factory.The proper time resolution at Z factory is about 20-30 times better than that at B factory.Therefore the determination of the mixing parameters at a giga-Z factory is more precise.

  10. The biology and ecology of the jumbo squid Dosidicus gigas (Cephalopoda in Chilean waters: a review

    Directory of Open Access Journals (Sweden)

    Christian M Ibáñez

    2015-07-01

    Full Text Available ABSTRACT. The jumbo squid Dosidicus gigas is the most abundant cephalopod species in the southeastern Pacific Ocean, which supports the biggest cephalopod fishery in the world. Due to its growing economic importance, the population growth and distributional expansion of this squid is being increasingly studied. Nevertheless, some basic features of the biology of D. gigas are still unknown or have been poorly investigated. In this review we summarize the known information regarding the biology and ecology of this species in the southeastern Pacific Ocean; we focus on the Chilean region in order to propose hypotheses and research lines for a better understanding the life history of this organism. Available data on the size structure, reproduction and genetics of D. gigas allows us to propose hypotheses related to the squid's life history traits. Based on the current literature and publications of colleagues, we propose two hypotheses regarding the effect of spatial variation on the life history of D. gigas. Hypothesis 1: Squids mature at large sizes and spawn in oceanic waters with warm temperatures where paralarvae and juveniles develop. Immature squids migrate near shore to feed, grow and mature, and then return to the offshore sites to spawn. Hypothesis 2: Alternatively, juvenile D. gigas in the oceanic zone do not migrate to coastal waters and mature at small sizes compared to individuals living near the coast that mature at larger size and migrate to oceanic waters to spawn. We provide background information about the feeding behavior and parasitism of this species, suggesting that D. gigas is an important trophic link in the southeastern Pacific marine ecosystem. However, more studies on the feeding habits, reproduction and parasite load are needed not only to test hypotheses proposed in this study, but also to advance the overall knowledge of this species.

  11. Anti-Cancer Effect of Angelica Sinensis on Women’s Reproductive Cancer

    Directory of Open Access Journals (Sweden)

    Hong-Hong Zhu

    2012-06-01

    Full Text Available Objective: Danggui, the root of Angelica Sinensis, has traditionally been used for the treatment of women’s reproductive disorders in China for thousands of years. This study was to determine whether Danggui have potential anti-cancer effect on women’s cancer and its potential mechanism. Methods: Danggui was extracted by ethanol. The Cell Titer 96® Aqueous Non-Radioactive Cell Proliferation Assay was used to compare the effects of Danggui on human breast (MCF-7 and 7368 and cervical (CaSki and SiHa cancer cells with its effects on normal fibroblasts (HTB-125. A revised Ames test was used to test for antimutagenicity. The standard strains of Salmonella typhimarium (TA 100 and 102 were used in the test. Methyl methane sulfonate (MMS and UV light were used as positive mutagen controls and ethanol and double distilled water (DDW as controls. The SAS statistical software was used to analyze the data. Results: Danggui was found to be much more toxic to all cancer cell lines tested than to normal fibroblasts. There was a significant negative dose-effect relationship between Danggui and cancer cell viability. Average viability of MCF-7 was 69.5%, 18.4%, 5.7%, 5.7%, and 5.0% of control for Danggui doses 0.07, 0.14, 0.21, 0.32, and 0.64 ug/ul, respectively, with a Ptrend < 0.0001. Half maximal inhibitory dose (ID50 of Danggui for cancer cell lines MCF-7, CaSki, SiHa and CRL-7368 was 0.10, 0.09, 0.10 and 0.07 ug/ul, Functional Foods in Health and Disease 2012, 2(6:242-250respectively. For the normal fibroblasts, ID50 was 0.58 ug/ul. At a dose of 0.32 ug/ul, Danggui killed over 90% of the cells in each cancer cell line, but at the same dose, only 12.3 % of the normal HTB-125 cells were killed. Revertants per plate of TA 100 decreased with the introduction of increasing doses of Danggui extracts with a Ptrend < 0.0001 when UV light was used as a mutagen. There was no difference in revertants per plate between ethanol and DDW control groups. Conclusions

  12. [Ingestion and digestion of seven species of microalgae by larvae of Strombus gigas (Mesogastropoda: Strombidae)].

    Science.gov (United States)

    Patiño Súarez, V; Aldana Aranda, D

    2000-12-01

    The potential nutritional value of seven microalgal diets as measured by their ingestibility and digestibility to queen conch Strombus gigas larvae was tested with 30 day old larvae reared at 28 degrees C and fed at 1000 cells x ml(-1). The algae were Tetraselmis suecica, Tetraselmis chuii Isochrysis aff. galbana, Dunaliella tertiolecta, Chlamydomonas coccoides, Chaetoceros sp. and Thalassiosira fluviatilis. Ingestion and digestion were measured by the four nutritional stages studied with epifluorescence microscopy with live larvae. Temporal and absolute indices showed that larvae fed Chaetoceros sp. and T. fluviatilis had lower ingestion and digestion levels. The other algae are recommend to feed S. gigas larvae. PMID:15266796

  13. Rapid Authentication of the Herbal Medicine Plant Species Aralia continentalis Kitag. and Angelica biserrata C.Q. Yuan and R.H. Shan Using ITS2 Sequences and Multiplex-SCAR Markers

    OpenAIRE

    Wook Jin Kim; Byeong Cheol Moon; Sungyu Yang; Kyeong Suk Han; Goya Choi; A Yeong Lee

    2016-01-01

    Accurate identification of the plant species that are present in herbal medicines is important for quality control. Although the dried roots of Aralia continentalis (Araliae Continentalis Radix) and Angelica biserrata (Angelicae Pubescentis Radix) are used in the same traditional medicine, namely Dok-Hwal in Korean and Du-Huo in Chinese, the medicines are described differently in the national pharmacopeia. Further confusion arises from the distribution of dried Levisticum officinale and Herac...

  14. Expression of c-Fos protein and nitricoxide synthase in neurons of cerebral cortex from fetal rats in hypoxia and protective role of Angelica sinensis

    Institute of Scientific and Technical Information of China (English)

    Hong Yu; Hongxian Zhao; Yuling Wu

    2006-01-01

    BACKGROUND: Both c-Fos protein and nitricoxide synthase (NOS) have been used as general indexes in relative research about neurons, but it is lack of reports that c-Fos protein and NOS are applied synchronously to study the neurons of hypoxic fetal rats in uterus.OBJECTIVE: To study the effect of hypoxia in uterus on the expression of c-Fos protein and NOS in neurons of cerebral cortex from fetal rats and whether Angelica sinensis has the protective effect on these neurons in hypoxia.DESIGN: Randomized control experiment.SETTING: Department of Histology and Embryology, Luzhou Medical College.MATERIALS: Twelve adult female Wistar rats in oestrum and 1 male Wistar rat with bodymass from 220 to 250 g were chosen. Parenteral solution of Angelica sinensis mainly contained angelica sinensis, 10 mL/ampoule, was provided by Department of Agent of the Second Hospital Affiliated to Hubei Medical University (batch number: 01062310).METHODS: This experiment was completed in the Department of Histology and Embryology of Luzhou Medical College from September 2003 to June 2004. ① Twelve adult female Wistar rats in oestrum and 1 male Wistar rat were housed in one rearing cage. Vaginal embolus was performed on conceive female rat at 8:00 am next day.On the 15th conceiving day,all conceiving rats were divided randomly into three groups:control group, hypoxia group and Angelica group with 4 in each group. Rats in hypoxia group and Angelica group were modeled with hypotonic hypoxia in uterus. Angelica group: Rats were injected with 8 mL/kg Angelica sinensis injection through caudal veins before hypoxia.Hypoxia group:Rats were injected with the same volume of saline.Control group:Rats were not modeled and fed with normal way. ② Twenty embryos of rats were chosen randomly from each group and then routinely embedded in paraffin. Paraffin sections were cut from the brain of embryos to anterior fontanelle. Double-label staining was used to detect the expression of nNOS and c-Fos in

  15. Antiproliferative constituents from umbelliferae plants. V. A new furanocoumarin and falcarindiol furanocoumarin ethers from the root of Angelica japonica.

    Science.gov (United States)

    Fujioka, T; Furumi, K; Fujii, H; Okabe, H; Mihashi, K; Nakano, Y; Matsunaga, H; Katano, M; Mori, M

    1999-01-01

    The CHCl3 extract of the root of Angelica japonica showed high inhibitory activity against human gastric adenocarcinoma (MK-1) cell growth. From this extract, a new furanocoumarin named japoangelone and four furanocoumarin ethers of falcarindiol, named japoangelols A-D, were isolated together with caffeic acid methyl ester, four polyacetylenic compounds (panaxynol, falcarindiol, 8-O-acetylfalcarindiol, and (9Z)-1,9-heptadecadiene-4,6-diyne-3,8,11-triol), eight coumarins (osthol, isoimperatorin, scopoletin, byakangelicin, xanthotoxin, bergapten, oxypeucedanin methanolate, and oxypeucedanin hydrate), and two chromones (3'-O-acetylhamaudol, and hamaudol). The structures of the new isolates were determined based on spectral evidence. The ED50 of isolates against MK-1, HeLa, and B16F10 cell lines are reported. PMID:9987830

  16. Status of the Pacific Oyster Crassostrea gigas (Thunberg, 1793) in the western Limfjord, Denmark – Five years of population development

    DEFF Research Database (Denmark)

    Groslier, Tilde; Christensen, Helle Torp; Davids, Jens;

    2014-01-01

    The Pacific oyster, Crassostrea gigas, was introduced into the Netherlands in 1964 for aquaculture purposes and has since spread extensively in Northern European waters. Eight locations in the western part of the Limfjord, Denmark, first sampled in 2006 were revisited in 2011, to determine how the...... population of C. gigas has changed. Densities were lower at all but two locations. No differences in average shell lengths or condition indices were detected. No changes in the number or distribution of shell size classes were observed. These similarities suggest there is a single population that has not....... gigas population is not a cause for concern in the Limfjord ecosystem...

  17. The Global Invertebrate Genomics Alliance (GIGA). 2014. Developing Community Resources to Study Diverse Invertebrate Genomes

    NARCIS (Netherlands)

    Pomponi, S.A.

    2014-01-01

    Over 95% of all metazoan (animal) species comprise the “invertebrates,” but very few genomes from these organisms have been sequenced. We have, therefore, formed a “Global Invertebrate Genomics Alliance” (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major cha

  18. Induction of gynogenetic haploidy in oyster Crassostrea gigas, using ultra violet irradiated sperms

    Digital Repository Service at National Institute of Oceanography (India)

    Goswami, U.

    Eggs of Crassostrea gigas were fertilized with sperms exposed to different doses of UV irradiations by keeping a constant rate of 121.47 ergs. mm/2 sec/1 and changing the period of exposure from 4 to 90 sec. Samples of larvae were analysed...

  19. A freak twin trilobite larva of the Indian horseshoe crab Tachypleus gigas (Muller)

    Digital Repository Service at National Institute of Oceanography (India)

    Mishra, J.K.; Chatterji, A; Parulekar, A

    Early embryonic stages of a horseshoe crab Tachypleus gigas were studied using micrographs of live embryo. A freak egg showing two trilobite larvae bridged with each other was noticed on 38th day after fertilization. Morphology of this egg has been...

  20. Histone H3 gene in the Pacific oyster, Crassostrea gigas Thunberg, 1793: molecular and cytogenetic characterisations

    Directory of Open Access Journals (Sweden)

    Karine Bouilly

    2010-12-01

    Full Text Available The Pacific oyster, Crassostrea gigas Thunberg, 1793 (2n = 20 is an economically important mollusc species cultured throughout the world. The most frequently used technique for molecular cytogenetic studies is fluorescence in situ hybridisation which offers new opportunities for the identification of oyster chromosomes. In oysters, it has been used to locate telomeric sequences, satellite DNA, simple sequence repeats, ribosomal RNA genes, and bacteriophage P1 clones. However, regarding chromosome identification, no study has been done with histone H3 gene. Histone H3 is among the most conserved eukaryotic proteins. Most histone H3 genes are repeatedly organised into clusters, which make them an ideal chromosomal marker. In bivalves, some data exist concerning sequence information but little knowledge is available concerning the physical mapping of histone genes. The histone H3 gene was sequenced in C. gigas and phylogenetic analysis revealed that C. gigas was more closely related to Ostrea edulis Linnaeus, 1758 and species of the genus Mytilus Linnaeus, 1758. In C. gigas, the histone H3 gene was mapped on two different pairs of chromosomes, one at an interstitial site on the long arm of chromosome pair 4, and the other on the telomeres of the smaller chromosome pair (pair 10. Polymorphism was detected on the telomeres of pair 10, once it was possible to observe single or double signals. Comparative chromosomal mapping should improve our understanding of bivalve genome organisation.

  1. Impact of an icy winter on the Pacific oyster (Crassostrea gigas Thunberg, 1793) populations in Scandinavia

    DEFF Research Database (Denmark)

    Strand, Åsa; Blanda, Elisa; Bodvin, Torjan;

    2012-01-01

    The Pacific oyster (Crassostrea gigas) is an invasive species that has dispersed into Scandinavia during the last few decades. The objective of this study was to evaluate the effects of extreme winter conditions on the mortality of the Pacific oyster in Scandinavia. The study was done by compiling...

  2. Fishery biology of jumbo flying squid Dosidicus gigas off Costa Rica Dome

    Science.gov (United States)

    Chen, Xinjun; Li, Jianghua; Liu, Bilin; Li, Gang; Lu, Huajie

    2014-06-01

    The jumbo flying squid ( Dosidicus gigas) population was surveyed with the help of Chinese squid jigging vessels off the Costa Rica Dome (4°-11°N, 90°-100°W) in 2009 and 2010. The daily catch of D. gigas in the two survey cruises ranged from 0 to 5.5 t and was mostly obtained from the areas bounded by 6°-9°N and 91°-94°W and by 6°30'-7°30'N and 96°-97°W. The sea surface temperature in the areas yielding the most catch ranged from 27.5 to 29°C. The sex ratio of the total catch was 3.75:1 (female: male). The mantle length of the squid ranged from 211 to 355 mm (male) and from 204 to 429 mm (female) with an average of 297.9 and 306.7 mm, respectively. In the relationship of the mantle length (mm) and body weight (g) of the squid, there was no significant difference between sexes. The female and male were at a similar maturity, and most individuals are maturing or have matured with a few females being spent. The size (mantle length) and age at the first sexual maturity were 297 mm and 195 d in females, and less than 211 mm and 130 d in males, respectively. Most of the sampled stomachs (70.6%) had no food remains. The major preys of the squids were fish, cephalopods and crustaceans, with the most abundant Myctophum orientale and D. gigas. The preys in more than 65% of the non-empty sampled stomachs evidenced the cannibalism of D. gigas. The results improved current understanding of the fishery biology of D. gigas off the Costa Rica Dome, which may facilitate the assessment and management of relative fishery resources.

  3. Fishery Biology of Jumbo Flying Squid Dosidicus gigas off Costa Rica Dome

    Institute of Scientific and Technical Information of China (English)

    CHEN Xinjun; LI Jianghua; LIU Bilin; LI Gang; LU Huajie

    2014-01-01

    The jumbo flying squid (Dosidicus gigas) population was surveyed with the help of Chinese squid jigging vessels off the Costa Rica Dome (4˚-11˚N, 90˚-100˚W) in 2009 and 2010. The daily catch of D. gigas in the two survey cruises ranged from 0 to 5.5 t and was mostly obtained from the areas bounded by 6˚-9˚N and 91˚-94˚W and by 6˚30´-7˚30´N and 96˚-97˚W. The sea surface temperature in the areas yielding the most catch ranged from 27.5 to 29℃. The sex ratio of the total catch was 3.75:1 (female:male). The mantle length of the squid ranged from 211 to 355 mm (male) and from 204 to 429 mm (female) with an average of 297.9 and 306.7 mm, respectively. In the relationship of the mantle length (mm) and body weight (g) of the squid, there was no significant dif-ference between sexes. The female and male were at a similar maturity, and most individuals are maturing or have matured with a few females being spent. The size (mantle length) and age at the first sexual maturity were 297 mm and 195 d in females, and less than 211 mm and 130 d in males, respectively. Most of the sampled stomachs (70.6%) had no food remains. The major preys of the squids were fish, cephalopods and crustaceans, with the most abundant Myctophum orientale and D. gigas. The preys in more than 65%of the non-empty sampled stomachs evidenced the cannibalism of D. gigas. The results improved current understanding of the fishery biology of D. gigas off the Costa Rica Dome, which may facilitate the assessment and management of relative fishery re-sources.

  4. Seawater temperature effect on metal accumulation and toxicity in the subantarctic Macquarie Island isopod, Exosphaeroma gigas.

    Science.gov (United States)

    Lewis, Alexander; King, Catherine K; Hill, Nicole A; Cooper, Ashley; Townsend, Ashley T; Mondon, Julie A

    2016-08-01

    Very little is currently known of subantarctic nearshore invertebrates' sensitivity to environmental metals and the role of temperature in this relationship. This study investigated Cu and Zn toxicity in the common subantarctic intertidal isopod, Exosphaeroma gigas, and the influence of temperature on Cu toxicity and bioaccumulation kinetics. Adult E. gigas are insensitive to Cu and Zn at concentrations of 3200 and 7400μg/L respectively in non-renewal tests at 5.5°C (ambient subtidal temperature) over 14days. Under renewed exposures over the same temperature and time period the LC50 for copper was 2204μg/L. A 10-fold increase in Cu body burden occurred relative to zinc, indicating E. gigas has different strategies for regulating the two metals. Copper toxicity and time to mortality both increased with elevated temperature. However, temperature did not significantly affect Cu uptake rate and efflux rate constants derived from biodynamic modelling at lower Cu concentrations. These results may be attributable to E. gigas being an intertidal species with physiological mechanisms adapted to fluctuating environmental conditions. Cu concentrations required to elicit a toxicity response indicates that E. gigas would not be directly threatened by current levels of Cu or Zn present in Macquarie Island intertidal habitats, with the associated elevated temperature fluctuations. This study provides evidence that the sensitivity of this subantarctic intertidal species to metal contaminants is not as high as expected, and which has significance for the derivation of relevant guidelines specific to this distinct subpolar region of the world. PMID:27367827

  5. Selective Acid Hydrolysis Condition for the Composition and Linkage with a Fructofuranosyl Backbone of a Polysaccharide from Angelica sinensis (Oliv) Diels

    Institute of Scientific and Technical Information of China (English)

    Gui Yun XU; Yang CHEN; Ru Xian CHEN

    2006-01-01

    A new polysaccharide was extracted and purified from the roots of Angelica sinensis (Oliv) Diels (ASD). Its composition and linkage was elucidated by selective hydrolysis and GC/MS analysis of its derivatives. The polysaccharide was made of→1) Fruf(2→and→6) GlCp (1→as its backbone with highly branched structure. To our best knowledge, this is the first report of the fructose residue in polysaccharides from the roots of the ASD.

  6. Assessment of Angelica sinensis (Oliv.) Diels as a repellent for personal protection against mosquitoes under laboratory and field conditions in northern Thailand

    OpenAIRE

    Champakaew, Danita; Junkum, Anuluck; Chaithong, Udom; Jitpakdi, Atchariya; Riyong, Doungrat; Wannasan, Anchalee; Intirach, Jitrawadee; Muangmoon, Roongtawan; Chansang, Arpaporn; Tuetun, Benjawan; Pitasawat, Benjawan

    2016-01-01

    Background Angelica sinensis (Oliv.) hexane extract (AHE) has been reported as a proven and impressive repellent against laboratory-reared female Aedes aegypti mosquitoes. With the aim of promoting products of plant origin as a viable alternative to conventional synthetic substances, this study was designed to transform AHE-based repellents for exploitable commercial production by enhancing their efficacy and assessing their physical and biological stability as well as repellency against mosq...

  7. Transport of Twelve Coumarins from Angelicae Pubescentis Radix across a MDCK-pHaMDR Cell Monolayer—An in Vitro Model for Blood-Brain Barrier Permeability

    OpenAIRE

    Yan-Fang Yang; Wei Xu; Wei Song; Min Ye; Xiu-Wei Yang

    2015-01-01

    Angelicae Pubescentis Radix (APR), a widely used traditional Chinese medicine, is reported to have central nervous system activities. The purpose of this study was to characterize the blood-brain barrier permeability of twelve coumarins from APR including umbelliferone (1), osthol (2), scopoletin (3), peucedanol (4), ulopterol (5), angepubebisin (6), psoralen (7), xanthotoxin (8), bergapten (9), isoimperatorin (10), columbianadin (11), and columbianetin acetate (12) with an in vitro model usi...

  8. Status of the Pacific oyster Crassostrea gigas (Thunberg, 1793) in the western Limfjord, Denmark ‐ Five years of population development

    OpenAIRE

    Groslier, Tilde

    2012-01-01

    The Pacific oyster, Crassostrea gigas, has been present in Europe since it was introduced in 1964 for aquacultural purposes in the Netherlands, from where it has since spread extensively. This study revisits eight locations in the western part of the Limfjord, Denmark, that were examined for the presence of C. gigas in 2006, to determine how the population of Pacific oysters has developed in the five intervening years. Densities where found to have declined at all but two locations on Mors. N...

  9. Status of the Pacific Oyster Crassostrea gigas (Thunberg, 1793) in the western Limfjord, Denmark - Five years of population development

    OpenAIRE

    Groslier, Tilde; Christensen, Helle Torp; Davids, Jens; Dolmer, Per; Elmedal, Ingrid; Wejlemann Holm, Mark; Hansen, Benni Winding

    2014-01-01

    The Pacific oyster, Crassostrea gigas, was introduced into the Netherlands in 1964 for aquaculture purposes and has since spread extensively in Northern European waters. Eight locations in the western part of the Limfjord, Denmark, first sampled in 2006 were revisited in 2011, to determine how the population of C. gigas has changed. Densities were lower at all but two locations. No differences in average shell lengths or condition indices were detected. No changes in the number or distributio...

  10. Ostreid herpesvirus 1 detection and relationship with Crassostrea gigas spat mortality in France between 1998 and 2006

    OpenAIRE

    Garcia Céline; Thébault Anne; Dégremont Lionel; Arzul Isabelle; Miossec Laurence; Robert Maeva; Chollet Bruno; François Cyrille; Joly Jean-Pierre; Ferrand Sylvie; Kerdudou Nolwenn; Renault Tristan

    2011-01-01

    Abstract Since its molecular characterisation, Ostreid herpesvirus 1 (OsHV-1) has been regularly detected in Crassostrea gigas in France. Although its pathogenicity was demonstrated on larval stages, its involvement during mortality outbreaks at the juvenile stage was highly suspected but not evidenced. To investigate mortality outbreaks, the French National Network for Surveillance and Monitoring of Mollusc Health (REPAMO) carried out two surveys in juvenile C. gigas. The first survey lasted...

  11. Innovative uses of GigaPan Technology for Onsite and Distance Education

    Science.gov (United States)

    Bentley, C.; Schott, R. C.; Piatek, J. L.; Richards, B.

    2013-12-01

    GigaPans are gigapixel panoramic images that can be viewed at a wide range of magnifications, allowing users to explore them in various degrees of detail from the smallest scale to the full image extent. In addition to panoramic images captured with the GigaPan camera mount ('Dry Falls' - http://www.gigapan.com/gigapans/89093), users can also upload annotated images (For example, 'Massanutten sandstone slab with trace fossils (annotated)', http://www.gigapan.com/gigapans/124295) and satellite images (For example, 'Geology vs. Topography - State of Connecticut', http://www.gigapan.com/gigapans/111265). Panoramas with similar topics have been gathered together on the site in galleries, both user-generated and site-curated (For example, http://www.gigapan.com/galleries?categories=geology&page=1). Further innovations in display technology have also led to the development of improved viewers (for example, the annotations in the image linked above can be explored via paired viewers at http://coursecontent.nic.edu/bdrichards/gigapixelimages/callanview) GigaPan panoramas can be created through use of the GigaPan robotic camera mount and a digital camera (different models of the camera mount are available and work with a wide range of cameras). The camera mount can be used to create high-resolution pans ranging in scale from hand sample to outcrop up to landscape via the stitching software included with the robotic mount. The software can also be used to generate GigaPan images from other sources, such as thin section or satellite images, so these images can also be viewed with the online viewer. GigaPan images are typically viewed via a web-based interface that allows the user to interact with the image from the limits of the image detail up to the full panorama. After uploading, information can be added to panoramas with both text captions and geo-referencing (geo-located panoramas can then be viewed in Google Earth). Users can record specific locations and zoom levels in

  12. Exposure to the toxic dinoflagellate Alexandrium catenella modulates juvenile oyster Crassostrea gigas hemocyte variables subjected to different biotic conditions.

    Science.gov (United States)

    Lassudrie, Malwenn; Soudant, Philippe; Nicolas, Jean-Louis; Miner, Philippe; Le Grand, Jacqueline; Lambert, Christophe; Le Goïc, Nelly; Hégaret, Hélène; Fabioux, Caroline

    2016-04-01

    The Pacific oyster Crassostrea gigas is an important commercial species cultured throughout the world. Oyster production practices often include transfers of animals into new environments that can be stressful, especially at young ages. This study was undertaken to determine if a toxic Alexandrium bloom, occurring repeatedly in French oyster beds, could modulate juvenile oyster cellular immune responses (i.e. hemocyte variables). We simulated planting on commercial beds by conducting a cohabitation exposure of juvenile, "specific pathogen-free" (SPF) oysters (naïve from the environment) with previously field-exposed oysters to induce interactions with new microorganisms. Indeed, toxic Alexandrium spp. exposures have been reported to modulate bivalve interaction with specific pathogens, as well as physiological and immunological variables in bivalves. In summary, SPF oysters were subjected to an artificial bloom of Alexandrium catenella, simultaneously with a cohabitation challenge. Exposure to A. catenella, and thus to the paralytic shellfish toxins (PSTs) and extracellular bioactive compounds produced by this alga, induced higher concentration, size, complexity and reactive oxygen species (ROS) production of circulating hemocytes. Challenge by cohabitation with field-exposed oysters also activated these hemocyte responses, suggesting a defense response to new microorganism exposure. These hemocyte responses to cohabitation challenge, however, were partially inhibited by A. catenella exposure, which enhanced hemocyte mortality, suggesting either detrimental effects of the interaction of both stressors on immune capacity, or the implementation of an alternative immune strategy through apoptosis. Indeed, no infection with specific pathogens (herpesvirus OsHV-1 or Vibrio aesturianus) was detected. Additionally, lower PST accumulation in challenged oysters suggests a physiological impairment through alteration of feeding-related processes. Overall, results of this

  13. GigaBASE在数据采集系统软件中的应用

    Institute of Scientific and Technical Information of China (English)

    衣应刚; 孟庆利; 臧国华

    2009-01-01

    采用模块化设计方法开发数据采集系统软件时,不同数据记录方式的优缺点,主要介绍对象关系数据库GigaBASE的特性以及如何使用它实现分布式雷电定位系统软件的数据存储模块.测试结果表明:使用GigaBASE管理采集数据安全可靠、查询方便快捷,广泛适用于高、低速数据采集系统软件.

  14. Attenuated reproduction of Strombus gigas by an Apicomplexa: Emeriidae-like parasite in the digestive gland.

    Science.gov (United States)

    Baqueiro Cardenas, Erick; Montero, Jorge; Frenkiel, Liliane; Aldana Aranda, Dalila

    2012-07-01

    An intense and generalized sporozoan infection was detected in every population of the queen conch, Strombus gigas through the Caribbean. In this contribution we establish the relationship between occurrences of an Apicomplexa: Emeriidae-like organism and reproductive activity at San Andres archipelago, Colombia. Occurrence of the parasites was estimated counting the feeding stage Merozoites and cysts Sporozoites at 40× magnification. Nonmetric multidimensional scaling analysis (NMDS) was made to correlate the parasites stages abundance with frequency of the reproductive stages. Gametogenesis and spawning were always low coinciding with high numbers of Merozoites, a positive correlation was established between parasite abundance with reabsorption and undifferentiated stages, and negative correlation was observed between parasite abundance with maturity and spawning stages. The nonmetric multidimensional scaling (NMDS) shows that gametogenesis, maturity and spawning increase as the number of parasites decrease, factor that could be threatening reproduction of S. gigas through the Caribbean. PMID:22484565

  15. Giga DSL使铜线接入进入千兆时代

    Institute of Scientific and Technical Information of China (English)

    黄磊

    2013-01-01

    高清视频等超高带宽业务的逐渐普及,以及有线电视服务商(MSO)同轴电缆接入技术的飞速发展,对电信运营商的铜线DSL接入能力提出了巨大的挑战。华为研发了基于单线对双绞线的新一代DSL接入技术——GigaDSL,并于2011年12月发布了GigaDSL样机。该样机在100米0.5mm线径的单线对双绞线上,

  16. Genetic variability and selective breeding for traits of aquacultural interest in the Pacific oyster (Crassostrea gigas)

    OpenAIRE

    Boudry, Pierre; Degremont, Lionel; Taris, Nicolas; Mccombie, Helen; Haffray, Pierrick; Ernande, Bruno

    2004-01-01

    The most significant genetic improvement for production of Pacific oyster (Crassastrea gigas) has been obtained through the breeding of triploids, especially since the development of tetraploids. Quantitative genetics studies suggest that significant gains, for disease resistance or for other traits of aquacultural interest, could be obtained using this approach. However, the limited extent of hatchery-propagation (versus natural recruitment) and/or various technical difficulties and biologic...

  17. "First class oysters" : progress and constgraints in genetic improvement of the Pacific oyster (Crassostrea gigas)

    OpenAIRE

    Boudry, Pierre

    2007-01-01

    The most significant genetic improvement for the production of Pacific oyster (Crassostrea gigas) up until now has been obtained through the production of triploids, particularly since the development of tetraploids in the mid 90s. Alternatively, quantitative genetics studies suggest that significant gains could be obtained in traits of aquacultural interest. However, the limited extent of hatchery propagation (compared with natural recruitment) in some countries and/or technical difficulties...

  18. Genetic variation and trade-offs for reproduction ans survival in the Pacific oyster Crassostrea gigas

    OpenAIRE

    Boudry, Pierre; Degremont, Lionel; Bedier, Edouard; Pouvreau, Stephane; Normand, Julien; Ernande, Bruno

    2006-01-01

    To date, the most significant method to genetically reduce reproductive effort in the Pacific oyster (Crassostrea gigas) has been through the production of triploids, especially since the development of tetraploid lines allowing the breeding of 'natural' triploids. Gametogenesis of triploid oysters is strongly reduced compared with diploids, although they are not fully sterile and can produce viable gametes and some progenies when crossed with diploids. Reduced reproductive allocation and hig...

  19. Den invasive art, Stillehavsøsters (Crassostrea gigas)ved Agger Tange, Limfjorden

    OpenAIRE

    Davids, Jens; Holm, Mark; Schollert, Michelle; Herring Rasmussen, Nicolai; Raith Richter, Stine

    2007-01-01

    Climate changes and the movement of the climate zones can have great influence on the ecosystems. Introduced species are for instants a huge problem around the world due to the possible damage it can cause on already existing ecosystems. This could be a problem if the introduced specie is invasive and spread to takeover the niche of native species. Due to the resent years with increased water temperature it has been possible for the invasive species Crassostrea gigas to reproduce in the Li...

  20. Lack of genetic differentiation among size groups of jumbo squid (Dosidicus gigas)

    OpenAIRE

    E Sandoval-Castellanos; M Uribe-Alcocer; P Díaz-Jaimes

    2009-01-01

    The population structure of the jumbo squid (Dosidicus gigas) is complex, containing several cohorts and three groups defined by their size (small, medium, and large) and by differences in maturation, growth, and life span. Several authors have indicated the possibility of such groups representing discrete genetic units even at level subspecies or species in statu nascendi. Genetic divergence was tested in samples from the Gulf of California (Mexico) and Peruvian Sea by estimation of populati...

  1. Physico-chemical and film forming properties of giant squid (Dosidicus gigas) gelatin

    OpenAIRE

    Giménez, B.; Gómez Estaca, Joaquín; Alemán, A.; Gómez Guillén, M. C.; Montero García, Pilar

    2009-01-01

    Giant squid (Dosidicus gigas) inner and outer tunics were subjected to hydrolysis with pepsin prior to gelatin extraction (G1 gelatin) by a mild-acid procedure. Furthermore, a second gelatin extraction (G2 gelatin) was done using the collagenous residues that remained from the first extraction. Pepsin allows the collagen solubilisation and the extraction yield to increase by yielding extracts high in α-chains. G1 exhibited good gel forming ability but G2 showed poor viscoelastic behaviour and...

  2. Size increment of jumbo flying squid Dosidicus gigas mature females in Peruvian waters, 1989-2004

    Science.gov (United States)

    Argüelles, Juan; Tafur, Ricardo; Taipe, Anatolio; Villegas, Piero; Keyl, Friedeman; Dominguez, Noel; Salazar, Martín

    2008-10-01

    Changes in population structure of the jumbo flying squid Dosidicus gigas in Peruvian waters were studied based on size-at-maturity from 1989 to 2004. From 1989 to 1999, mature squid belonging to the medium-sized group prevailed, but from 2001 on, mature squids were larger. This change is not related to the changes in sea surface temperature and we hypothesized that it was caused by the population increase of mesopelagic fishes as prey.

  3. Comprehensive Model of Jumbo Squid Dosidicus gigas Trophic Ecology in the Northern Humboldt Current System

    OpenAIRE

    Alegre, Ana; Ménard, Frédéric; Tafur, Ricardo; Espinoza, Pepe; Argüelles, Juan; Maehara, Víctor; Flores, Oswaldo; Simier, Monique; Bertrand, Arnaud

    2014-01-01

    The jumbo squid Dosidicus gigas plays an important role in marine food webs both as predator and prey. We investigated the ontogenetic and spatiotemporal variability of the diet composition of jumbo squid in the northern Humboldt Current system. For that purpose we applied several statistical methods to an extensive dataset of 3,618 jumbo squid non empty stomachs collected off Peru from 2004 to 2011. A total of 55 prey taxa was identified that we aggregated into eleven groups. Our results evi...

  4. Invasive range expansion by the Humboldt squid, Dosidicus gigas, in the eastern North Pacific

    OpenAIRE

    Zeidberg, Louis D.; Robison, Bruce H.

    2007-01-01

    A unique 16-year time series of deep video surveys in Monterey Bay reveals that the Humboldt squid, Dosidicus gigas, has substantially expanded its perennial geographic range in the eastern North Pacific by invading the waters off central California. This sustained range expansion coincides with changes in climate-linked oceanographic conditions and a reduction in competing top predators. It is also coincident with a decline in the abundance of Pacific hake, the most important commercial grou...

  5. Jumbo Squid (Dosidicus gigas) in situ Target Strength measurements in Northwest Mexico

    OpenAIRE

    Villalobos, H.; Manini-Ramos, F.; Salinas-Zavala, C.; Brehmer, Patrice

    2013-01-01

    In order to convert acoustic abundance indexes into biomass is essential to establish the relationship between squid size dorsal mantle length (DML) and acoustic Target Strength (TS). We had carried out in situ measurement in 2012 off Baja California on Dosidicus gigas. For both frequencies, we found significant differences between modes of measured and predicted TS distributions, 6 and 11 dB for 120 and 38 kHz, respectively. It is known that TS varies with several factors, including echosoun...

  6. The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes

    OpenAIRE

    GIGA Community of Scientists

    2013-01-01

    Over 95% of all metazoan (animal) species comprise the “invertebrates,” but very few genomes from these organisms have been sequenced. We have, therefore, formed a “Global Invertebrate Genomics Alliance” (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a la...

  7. Identification and Functional Characterization of Two Executioner Caspases in Crassostrea gigas

    OpenAIRE

    Tao Qu; Baoyu Huang; Linlin Zhang; Li Li; Fei Xu; Wen Huang; Chunyan Li; Yishuai Du; Guofan Zhang

    2014-01-01

    Caspase-3 and caspase-7 are two key effector caspases that play important roles in apoptotic pathways that maintain normal tissue and organ development and homeostasis. However, little is known about the sequence, structure, activity, and function of effector caspases upon apoptosis in mollusks, especially marine bivalves. In this study, we investigated the possible roles of two executioner caspases in the regulation of apoptosis in the Pacific oyster Crassostrea gigas. A full-length caspase-...

  8. Identification and functional characterization of two executioner caspases in Crassostrea gigas.

    Directory of Open Access Journals (Sweden)

    Tao Qu

    Full Text Available Caspase-3 and caspase-7 are two key effector caspases that play important roles in apoptotic pathways that maintain normal tissue and organ development and homeostasis. However, little is known about the sequence, structure, activity, and function of effector caspases upon apoptosis in mollusks, especially marine bivalves. In this study, we investigated the possible roles of two executioner caspases in the regulation of apoptosis in the Pacific oyster Crassostrea gigas. A full-length caspase-3-like gene named Cgcaspase-3 was cloned from C.gigas cDNA, encoding a predicted protein containing caspase family p20 and p10 domain profiles and a conserved caspase active site motif. Phylogenetic analysis demonstrated that both Cgcaspase-3 and Cgcaspase-1 may function as effector caspases clustered in the invertebrate branch. Although the sequence identities between the two caspases was low, both enzymes possessed executioner caspase activity and were capable of inducing cell death. These results suggested that Cgcaspase-3 and Cgcaspase-1 were two effector caspases in C. gigas. We also observed that nucleus-localized Cgcaspase-3, may function as a caspase-3-like protein and cytoplasm-localized Cgcaspase-1 may function as a caspase-7-like protein. Both Cgcaspase-3 and Cgcaspase-1 mRNA expression increased after larvae settled on the substratum, suggesting that both caspases acted in several tissues or organs that degenerated after oyster larvae settlement. The highest caspase expression levels were observed in the gills indicating that both effector caspases were likely involved in immune or metabolic processes in C. gigas.

  9. Studi Karakterisasi Pembuatan Kitin Dan Kitosan Dari Cangkang Belangkas (Tachypleus Gigas) Untuk Penentuan Berat Molekul

    OpenAIRE

    Noviary, Harry

    2011-01-01

    Research of the characterization study of the manufacture and modification of chitin and chitosan from crab shells (tachipleus gigas) for molecular weight determination. Chitin is modified to obtain phases that produce chitin crab I and II. Cshitin crab I used to produce chitosan crab I, so did the king crab chitin II is used to produce chitosan crab II. Characterization of chitin and chitosan involves determining the water content, ash content, total nitrogen, protein content, elemental anal...

  10. Penggunaan Karboksimetil Kitosan Dari Cangkang Belangkas (Tachypleus Gigas) Sebagai Adsorben Untuk Menurunkan Konsentrasi Logam Pb

    OpenAIRE

    Ananda, Fatya

    2015-01-01

    Reaserch has been done on the using of carboxymethyl chitosan from horseshoe crab’s shells (Tachypleus gigas) as adsorbent to reduce concentration of Pb metal. Carboxymethyl chitosan was made by reacting chitosan sample with NaOH 40 % and monochloroacetic acid which dispersed in 2-propanol for 10 hours at room temperature that results in carboxymethyl chitosan shown by functional groups using FTIR. On the adsorption process using standard solution of Pb with concentration of 5 mg/L and variat...

  11. Rapid accumulation of an interleukin 17 homolog transcript in Crassostrea gigas hemocytes following bacterial exposure

    OpenAIRE

    Roberts, S; Gueguen, Yannick; De Lorgeril, Julien; Goetz, F

    2008-01-01

    Interleukin-17 (IL-17) gene models have been found in the sequenced genomes of Strongylocentrotus purpuratus and Caenorhabditis elegans. However, there have been no published reports on the empirical cloning and characterization of any interleukin cDNAs in invertebrates. From a Pacific oyster (Crossostrea gigas) hemocyte cDNA library, two clones were obtained that encoded a protein similar to vertebrate IL-17s. The putative oyster IL-17 homolog (CgIL-17) was 27% identical to rainbow trout IL-...

  12. Silicon based millimeterwave integrated circuits for multi giga-bits-per-second wireless data

    OpenAIRE

    Kodkani, Rahul M.

    2009-01-01

    This research focuses on the design of silicon based millimeterwave integrated circuits for Multi Giga bits-per -second wireless communications. The use of Active sub- harmonic Mixers(ASHM) and Passive Sub-harmonic Mixers (PSHM) for millimeterwave receivers was explored for their advantages over fundamental order mixers. A multi-phase active sub-harmonic mixer/downconverter with an on-chip integrated ring Voltage Controlled Oscillator(VCO) was designed for millimeterwave wireless systems in a...

  13. Study of the antioxydant capacity in link with reproduction in the Pacific oyster Crassostrea gigas

    OpenAIRE

    Béguel, Jean-Philippe

    2012-01-01

    The "cost of reproduction" is a concept defining that a high reproductive investment has a price that is paid later by an acceleration of senescence. That may translate tradeoff between reproduction and other physiological functions such as antioxidant defense. In the Pacific oyster Crassostrea gigas, reproduction is a major physiological function. In a study led to understand the summer mortalities affecting this species, a negative correlation between reproductive effort and survival was ob...

  14. Viral gametocytic hypertrophy of Crassostrea gigas in France: from occasional records to disease emergence?

    OpenAIRE

    Garcia, Celine; Robert, Maeva; ARZUL, Isabelle; Chollet, Bruno; Joly, Jean-pierre; Miossec, Laurence; Comtet, Thierry; Berthe, Franck

    2006-01-01

    Viral gametocytic hypertrophy was reported for the first time in 2001 in Pacific oyster Crassostrea gigas in France. Since this date, the number of reported cases and the distribution area have increased every year; however, the cases are not associated with macroscopic signs or increased mortality rates. Both male and female gametes were hypertrophied and basophilic inclusions were observed in gamete nuclei, Transmission electron microscopy revealed the presence of viral particles in these i...

  15. Giga-z: A 100,000 Object Superconducting Spectrophotometer for LSST Follow-up

    Science.gov (United States)

    Marsden, Danica W.; Mazin, Benjamin A.; O'Brien, Kieran; Hirata, Chris

    2013-09-01

    We simulate the performance of a new type of instrument, a Superconducting Multi-Object Spectrograph (SuperMOS), that uses microwave kinetic inductance detectors (MKIDs). MKIDs, a new detector technology, feature good quantum efficiency in the UVOIR, can count individual photons with microsecond timing accuracy, and, like X-ray calorimeters, determine their energy to several percent. The performance of Giga-z, a SuperMOS designed for wide field imaging follow-up observations, is evaluated using simulated observations of the COSMOS mock catalog with an array of 100,000 R 423 nm = E/ΔE = 30 MKID pixels. We compare our results against a simultaneous simulation of LSST observations. In 3 yr on a dedicated 4 m class telescope, Giga-z could observe ≈2 billion galaxies, yielding a low-resolution spectral energy distribution spanning 350-1350 nm for each; 1000 times the number measured with any currently proposed LSST spectroscopic follow-up, at a fraction of the cost and time. Giga-z would provide redshifts for galaxies up to z ≈ 6 with magnitudes mi select subset. We also find catastrophic failure rates and biases that are consistently lower than for LSST. The added constraint on dark energy parameters for WL + CMB by Giga-z using the FoMSWG default model is equivalent to multiplying the LSST Fisher matrix by a factor of α = 1.27 (wp ), 1.53 (wa ), or 1.98 (Δγ). This is equivalent to multiplying both the LSST coverage area and the training sets by α and reducing all systematics by a factor of 1/\\sqrt{\\alpha }, advantages that are robust to even more extreme models of intrinsic alignment.

  16. Giga-Gauss scale quasistatic magnetic field generation in an 'escargot' target

    CERN Document Server

    Korneev, Ph; Tikhonchuk, V

    2014-01-01

    A simple setup for the generation of ultra-intense quasistatic magnetic fields, based on the generation of electron currents with a predefined geometry in a curved 'escargot' target, is proposed and analysed. Particle-In-Cell simulations and qualitative estimates show that giga-Gauss scale magnetic fields may be achieved with existent laser facilities. The described mechanism of the strong magnetic field generation may be useful in a wide range of applications, from laboratory astrophysics to magnetized ICF schemes.

  17. Complete mitochondrial genome and phylogenic analysis of the mudskipper Scartelaos gigas (Perciformes, Gobiidae).

    Science.gov (United States)

    Li, Zhe; Zhang, Yuting; Chen, Shixi; Chen, Wei; Hong, Wanshu

    2016-09-01

    In this paper, the complete mitochondrial genome sequence of Scartelaos gigas was firstly determined. The circular genome (16 717 bp) comprises 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control region. The overall base composition of S. gigas is 28.9% for C, 28.3% for A, 26.4% for T, 16.4% for G, with a slight A + T bias of 54.7%. In the control region, the termination-associated sequence and conserved sequence block domains were found, but the tandem repeat structure was not found. It has the typical vertebrate mitochondrial gene arrangement. The phylogenic analysis using the Neighbor-Joining method showed that the fishes belonging to Gobiidae, Odontoburidae, and Eleotridae formed three branches grouped with other fishes into one clade which separated from the mammals. We hope that the results from the present study will provide useful molecular information for the further studies on genetic structure and demographic history of S. gigas. PMID:26436681

  18. Giga-z: A 100,000 Object Superconducting Spectrophotometer for LSST Follow-up

    CERN Document Server

    Marsden, Danica; O'Brien, Kieran; Hirata, Chris

    2013-01-01

    We simulate the performance of a new type of instrument, a Superconducting Multi-Object Spectrograph (SuperMOS), that uses Microwave Kinetic Inductance Detectors (MKIDs). MKIDs, a new detector technology, feature good QE in the UVOIR, can count individual photons with microsecond timing accuracy and, like X-ray calorimeters, determine their energy to several percent. The performance of Giga-z, a SuperMOS designed for wide field imaging follow-up observations, is evaluated using simulated observations of the COSMOS mock catalog with an array of 100,000 R_{423 nm} = E/\\Delta E = 30 MKID pixels. We compare our results against a simultaneous simulation of LSST observations. In three years on a dedicated 4 m-class telescope, Giga-z could observe ~ 2 billion galaxies, yielding a low resolution spectral energy distribution (SED) spanning 350 - 1350 nm for each; 1000 times the number measured with any currently proposed LSST spectroscopic follow-up, at a fraction of the cost and time. Giga-z would provide redshifts f...

  19. Effects of cadmium on aneuploidy and hemocyte parameters in the Pacific oyster, Crassostrea gigas

    International Nuclear Information System (INIS)

    Pacific oysters, Crassostrea gigas, are commonly reared in estuaries where they are exposed to anthropogenic pollution. Much research has been made on the toxicity of cadmium to aquatic organisms because the compound recurrently contaminates their environment. Our study examined the influence of cadmium on aneuploidy level (lowered chromosome number in a percentage of somatic cells) and hemocyte parameters in C. gigas at different stages of life. Adults and juveniles were exposed to two different concentrations of cadmium. The first concentration applied was equivalent to a peak value found in Marennes-Oleron bay (Charente-Maritime, France; 50 ng L-1) and the second was 10 times higher (500 ng L-1). Exposure to 50 ng L-1 cadmium caused a significant decrease in the survival time of C. gigas, but exposure to 500 ng L-1 surprisingly affected the survival time positively. Significant differences in aneuploidy level were observed between the cadmium treatments and the control in adults but not in juveniles or the offspring of the adult groups. The effects of cadmium on hemocyte parameters were analyzed by flow cytometry. Several hemocyte parameters increased significantly after 21 days of cadmium exposure and subsequently decreased. Phenoloxidase-like activity, evaluated by spectrophotometry, varied over the time of the experiment and increased after 66 days of contact with 500 ng L-1 cadmium. Taken together, cadmium at environmentally relevant concentrations seems to have only moderate effects on aneuploidy and hemocyte parameters

  20. The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes

    KAUST Repository

    Bracken-Grissom, Heather

    2013-12-12

    Over 95% of all metazoan (animal) species comprise the invertebrates, but very few genomes from these organisms have been sequenced. We have, therefore, formed a Global Invertebrate Genomics Alliance (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a large taxonomic spectrum. We aim to promote standards that will facilitate comparative approaches to invertebrate genomics and collaborations across the international scientific community. Candidate study taxa include species from Porifera, Ctenophora, Cnidaria, Placozoa, Mollusca, Arthropoda, Echinodermata, Annelida, Bryozoa, and Platyhelminthes, among others. GIGA will target 7000 noninsect/nonnematode species, with an emphasis on marine taxa because of the unrivaled phyletic diversity in the oceans. Priorities for selecting invertebrates for sequencing will include, but are not restricted to, their phylogenetic placement; relevance to organismal, ecological, and conservation research; and their importance to fisheries and human health. We highlight benefits of sequencing both whole genomes (DNA) and transcriptomes and also suggest policies for genomic-level data access and sharing based on transparency and inclusiveness. The GIGA Web site () has been launched to facilitate this collaborative venture.

  1. 中药独活的化学成分及其抗肿瘤活性的研究进展%Research progress on the chemical constituents and the anti-tumor activity of Angelica pubescens

    Institute of Scientific and Technical Information of China (English)

    林黎; 钱晓萍; 刘宝瑞

    2011-01-01

    独活在临床治疗中运用广泛.现代研究表明独活含有多种抗肿瘤活性成分,包括甲氧基欧芹素、补骨脂素、花椒毒素、香柑内酯、伞形花内酯、异欧前胡素.本文就近年来对独活的化学成分及其抗肿瘤作用研究进展情况进行综述.%Angelica pubescens is widely used in the elinical treatment. Modern researches have showed that Angelica pubescens containins several anti - tumor constituenta , such as osthole , psoralen , xanthotoxin , aergapten , umbelliferone,isoimperatorin. The article submitted the research progress on the chemical constituents and the anti - tumor activity of Angelica pubescens.

  2. Polysaccharide from Angelica sinensis protects chondrocytes from H2O2-induced apoptosis through its antioxidant effects in vitro.

    Science.gov (United States)

    Zhuang, Chao; Xu, Nan-Wei; Gao, Gong-Ming; Ni, Su; Miao, Kai-Song; Li, Chen-Kai; Wang, Li-Ming; Xie, Hong-Guang

    2016-06-01

    This study aimed to explore the protective effects of Angelica sinensis polysaccharide (ASP) on rat chondrocyte injury induced by hydrogen peroxide (H2O2). Rat chondrocytes were cultured and treated with different concentrations of ASP alone or in combination with H2O2, and they were measured with cell viability, apoptosis, release of inflammatory cytokines, such as interleukin-1beta (IL-1β) and tumor necrosis factor-alpha (TNF-α), activity of superoxide dismutase (SOD), and catalase (CAT), and levels of malondialdehyde (MDA) production, respectively. In addition, quantitative real-time reverse transcription polymerase chain reaction was used to estimate the relative expression levels of osteoarthritis (OA)-associated genes, such as collagen type II (Col2a1), aggrecan, SOX9, matrix metalloproteinase (MMP)-1, -3, and -9, as well as tissue inhibitor of matrix metalloproteinase (TIMP)-1, respectively. Results indicated that ASP protected chondrocytes from H2O2-induced oxidative stress and subsequent cell injury through its antioxidant, antiapoptotic and anti-inflammatory effects in vitro. Our study suggests that ASP could become a therapeutic supplementation for the treatment of OA. PMID:26893055

  3. Anti-Osteoporotic Effects of Angelica sinensis (Oliv. Diels Extract on Ovariectomized Rats and Its Oral Toxicity in Rats

    Directory of Open Access Journals (Sweden)

    Dong Wook Lim

    2014-10-01

    Full Text Available Angelica sinensis root is one of the herbs most commonly used in China; it is also often included in dietary supplements for menopause in Europe and North America. In the present study, we examined the anti-osteoporotic effects of A. sinensis extract in an ovariectomized (OVX rat model of osteoporosis as well as toxicity of the extract after repeated oral administration. The OVX rats were treated with 17β-estradiol (10 μg/kg i.p. once daily or A. sinensis extract (30, 100, and 300 mg/kg, p.o. once daily for four weeks. The bone (femur mineral density (BMD of rats treated with the extract (300 mg/kg was significantly higher than that of the OVX-control, reaching BMD of the estradiol group. Markers of bone turnover in osteoporosis, serum alkaline phosphatase, collagen type I C-telopeptide and osteocalcin, were significantly decreased in the extract group. The body and uterus weight and serum estradiol concentration were not affected, and no treatment-related toxicity was observed during extract administration in rats. The results obtained indicate that A. sinensis extract can prevent the OVX-induced bone loss in rats via estrogen-independent mechanism.

  4. Extraction, chemical analysis of Angelica sinensis polysaccharides and antioxidant activity of the polysaccharides in ischemia-reperfusion rats.

    Science.gov (United States)

    Zhang, Song; He, Ben; Ge, Junbo; Li, Huibin; Luo, Xiuying; Zhang, Hui; Li, Yuhui; Zhai, Changlin; Liu, Pingang; Liu, Xin; Fei, Xuetao

    2010-11-01

    Angelica sinensis polysaccharides were analyzed using high performance liquid chromatography (HPLC) and Fourier Transform Infrared (FT-IR). The major sugar of the polysaccharide was saccharose (18.55%); and the sugar constituted about 83% of the monomer content. Glucose and fructose were found as minor components of the polysaccharides. The FT-IR spectra of A. sinensis polysaccharides are used for determination of their structural features. The FT-IR spectrum of A. sinensis polysaccharides showed bands at 1641 cm(-1), 1415 cm(-1), 1050 cm(-1) and 926 cm(-1) characteristic for the carboxylic group. Absorptions at 2920-2930 cm(-1) are attributed to asymmetrical stretching vibration of CH(2)-group. Medium stretch observed in the range 1650-1400 cm(-1) is assigned to C-C stretching of polysaccharides. Cardioprotective effects of A. sinensis polysaccharides were evaluated by using myocardial ischemia/reperfusion (IR) rats. A. sinensis polysaccharides treatment significantly reduced myocardial infarction size, enhanced CT-1 and antioxidant enzymes activity, downregulated caspase-12 mRNA expression in rats. The study strongly suggests the cardioprotective activity of A. sinensis polysaccharides in limiting ischemia-reperfusion induced myocardial injury. PMID:20691723

  5. HPLC-based activity profiling of Angelica pubescens roots for new positive GABAA receptor modulators in Xenopus oocytes.

    Science.gov (United States)

    Zaugg, Janine; Eickmeier, Eva; Rueda, Diana C; Hering, Steffen; Hamburger, Matthias

    2011-04-01

    A petroleum ether extract of the traditional Chinese herbal drug Duhuo (roots of Angelica pubescens Maxim. f. biserrata Shan et Yuan), showed significant activity in a functional two-microelectrode voltage clamp assay with Xenopus oocytes which expressed recombinant γ-aminobutyric acid type A (GABA(A)) receptors of the subtype α(1)β(2)γ(2S). HPLC-based activity profiling of the active extract revealed six compounds responsible for the GABA(A) receptor modulating activity. They were identified by microprobe NMR and high resolution mass spectrometry as columbianetin acetate (1), imperatorin (3), cnidilin (4), osthol (5), and columbianedin (6). In concentration-dependent experiments, osthol and cnidilin showed the highest potentiation of the GABA induced chloride current (273.6%±39.4% and 204.5%±33.2%, respectively at 300 μM). Bisabolangelone (2) only showed minor activity at the GABA(A) receptor. The example demonstrates that HPLC-based activity profiling is a simple and efficient method to rapidly identify GABA(A) receptor modulators in a bioactive plant extract. PMID:21147202

  6. Effect of SBD.4A--a defined multicomponent preparation of Angelica sinensis--in periodontal regeneration models.

    Science.gov (United States)

    Zhao, Hui; Alexeev, Alexei; Sharma, Vrushali; Guzman, Lorenzo Dave T; Bojanowski, Krzysztof

    2008-07-01

    Periodontitis is a major cause of tooth motility and loss, resulting in destruction of the supporting structures of the tooth, including periodontal ligaments and alveolar bone. Periodontal surgery can slow the progression of the disease, but is costly, invasive, limited by contraindications and technique-sensitive. Recently, non-invasive pharmacological treatments using proteinaceous biologicals have become available. Here, for the first time, the bone-regenerative capabilities of a non-proteinaceous biological--SBD.4A--a novel, stable multicomponent growth factor isolated from a medicinal plant Angelica sinensis are reported. SBD.4A was tested in osteoblast proliferation and differentiation systems, as well as in a fibroblast-secreted hyaluronic acid assay. Furthermore, SBD.4A was formulated in a slow release matrix and tested in the rat calvarial defect model. Apart from the previously reported strong stimulation of angiogenesis, fibroblast growth and collagen synthesis--the activities needed for periodontal regeneration--SBD.4A enhanced the deposition of hyaluronic acid and proliferation of osteoblasts in vitro, as well as bone regeneration in the rat calvarial defect model. Together, these results indicate the beneficial effect of SBD.4 on periodontal ligament and bone regeneration making the case for further development of this botanical growth factor. PMID:18389473

  7. The Kinome of Pacific Oyster Crassostrea gigas, Its Expression during Development and in Response to Environmental Factors.

    Directory of Open Access Journals (Sweden)

    Yanouk Epelboin

    Full Text Available Oysters play an important role in estuarine and coastal marine habitats, where the majority of humans live. In these ecosystems, environmental degradation is substantial, and oysters must cope with highly dynamic and stressful environmental constraints during their lives in the intertidal zone. The availability of the genome sequence of the Pacific oyster Crassostrea gigas represents a unique opportunity for a comprehensive assessment of the signal transduction pathways that the species has developed to deal with this unique habitat. We performed an in silico analysis to identify, annotate and classify protein kinases in C. gigas, according to their kinase domain taxonomy classification, and compared with kinome already described in other animal species. The C. gigas kinome consists of 371 protein kinases, making it closely related to the sea urchin kinome, which has 353 protein kinases. The absence of gene redundancy in some groups of the C. gigas kinome may simplify functional studies of protein kinases. Through data mining of transcriptomes in C. gigas, we identified part of the kinome which may be central during development and may play a role in response to various environmental factors. Overall, this work contributes to a better understanding of key sensing pathways that may be central for adaptation to a highly dynamic marine environment.

  8. The Kinome of Pacific Oyster Crassostrea gigas, Its Expression during Development and in Response to Environmental Factors

    Science.gov (United States)

    Epelboin, Yanouk; Quintric, Laure; Guévélou, Eric; Boudry, Pierre; Pichereau, Vianney; Corporeau, Charlotte

    2016-01-01

    Oysters play an important role in estuarine and coastal marine habitats, where the majority of humans live. In these ecosystems, environmental degradation is substantial, and oysters must cope with highly dynamic and stressful environmental constraints during their lives in the intertidal zone. The availability of the genome sequence of the Pacific oyster Crassostrea gigas represents a unique opportunity for a comprehensive assessment of the signal transduction pathways that the species has developed to deal with this unique habitat. We performed an in silico analysis to identify, annotate and classify protein kinases in C. gigas, according to their kinase domain taxonomy classification, and compared with kinome already described in other animal species. The C. gigas kinome consists of 371 protein kinases, making it closely related to the sea urchin kinome, which has 353 protein kinases. The absence of gene redundancy in some groups of the C. gigas kinome may simplify functional studies of protein kinases. Through data mining of transcriptomes in C. gigas, we identified part of the kinome which may be central during development and may play a role in response to various environmental factors. Overall, this work contributes to a better understanding of key sensing pathways that may be central for adaptation to a highly dynamic marine environment. PMID:27231950

  9. Sex-specific regulation of AMP-activated protein kinase (AMPK) in the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Guévélou, Eric; Huvet, Arnaud; Galindo-Sánchez, Clara E; Milan, Massimo; Quillien, Virgile; Daniel, Jean-Yves; Quéré, Claudie; Boudry, Pierre; Corporeau, Charlotte

    2013-10-01

    The hermaphrodite Pacific oyster Crassostrea gigas displays a high energy allocation to reproduction. We studied the expression of AMP-activated protein kinase (AMPK) during gametogenesis in the gonad and characterized the mRNA sequences of the AMPK subunits: the AMPK alpha mRNA sequence was previously characterized; we identified AMPK beta, AMPK gamma, and mRNAs of putative AMPK-related targets following bioinformatics mining on existing genomic resources. We analyzed the mRNA expression of the AMPK alpha, beta, and gamma subunits in the gonads of male and female oysters through a reproductive cycle, and we quantified the mRNA expression of genes belonging to fatty acid and glucose metabolism. AMPK alpha mRNA levels were more abundant in males at the first stage of gametogenesis, when mitotic activity and the differentiation of germinal cells occur, and were always more abundant in males than in females. Some targets of fatty acid and glucose metabolism appeared to be correlated with the expression of AMPK subunits at the mRNA level. We then analyzed the sex-specific AMPK activity by measuring the phosphorylation of the catalytic AMPK alpha protein and its expression at the protein level. Both the amount of AMPK alpha protein and threonine 172 phosphorylation appeared to be almost totally inhibited in mature female gonads at stage 3, at the time when accumulation of reserves in oocytes was promoted, while it remained at a high level in mature spermatozoa. Its activation might play a sex-dependent role in the management of energy during gametogenesis in oyster. PMID:23926284

  10. Characteristic and functional analysis of toll-like receptors (TLRs in the lophotrocozoan, Crassostrea gigas, reveals ancient origin of TLR-mediated innate immunity.

    Directory of Open Access Journals (Sweden)

    Yang Zhang

    Full Text Available The evolution of TLR-mediated innate immunity is a fundamental question in immunology. Here, we report the characterization and functional analysis of four TLR members in the lophotrochozoans Crassostreagigas (CgTLRs. All CgTLRs bear a conserved domain organization and have a close relationship with TLRs in ancient non-vertebrate chordates. In HEK293 cells, every CgTLR could constitutively activate NF-κB responsive reporter, but none of the PAMPs tested could stimulate CgTLR-activated NF-κB induction. Subcellular localization showed that CgTLR members have similar and dual distribution on late endosomes and plasma membranes. Moreover, CgTLRs and CgMyD88 mRNA show a consistent response to multiple PAMP challenges in oyster hemocytes. As CgTLR-mediated NF-κB activation is dependent on CgMyD88, we designed a blocking peptide for CgTLR signaling that would inhibit CgTLR-CgMyD88 dependent NF-κB activation. This was used to demonstrate that a Vibrio parahaemolyticus infection-induced enhancement of degranulation and increase of cytokines TNF mRNA in hemocytes, could be inhibited by blocking CgTLR signaling. In summary, our study characterized the primitive TLRs in the lophotrocozoan C. gigas and demonstrated a fundamental role of TLR signaling in infection-induced hemocyte activation. This provides further evidence for an ancient origin of TLR-mediated innate immunity.

  11. Status of the Pacific Oyster Crassostrea gigas (Thunberg, 1793) in the western Limfjord, Denmark – Five years of population development

    DEFF Research Database (Denmark)

    Groslier, Tilde; Christensen, Helle Torp; Davids, Jens; Dolmer, Per; Elmedal, Ingrid; Wejlemann Holm, Mark; Hansen, Benni Winding

    2014-01-01

    population of C. gigas has changed. Densities were lower at all but two locations. No differences in average shell lengths or condition indices were detected. No changes in the number or distribution of shell size classes were observed. These similarities suggest there is a single population that has not...... expanded in terms of geographic distribution. While reproduction does occur, conditions for population growth appear to be suboptimal. The species has become established in western Limfjord but abundance is low and densities are much lower than those considered harmful to the ecosystem. At present, the C....... gigas population is not a cause for concern in the Limfjord ecosystem...

  12. Exploitable Lipids and Fatty Acids in the Invasive Oyster Crassostrea gigas on the French Atlantic Coast

    Directory of Open Access Journals (Sweden)

    Flore Dagorn

    2016-05-01

    Full Text Available Economic exploitation is one means to offset the cost of controlling invasive species, such as the introduced Pacific oyster (Crassostrea gigas Thunberg on the French Atlantic coast. Total lipid and phospholipid (PL fatty acids (FAs and sterols were examined in an invasive population of C. gigas in Bourgneuf Bay, France, over four successive seasons, with a view to identify possible sources of exploitable substances. The total lipid level (% dry weight varied from 7.1% (winter to 8.6% (spring. Of this, PLs accounted for 28.1% (spring to 50.4% (winter. Phosphatidylcholine was the dominant PL throughout the year (up to 74% of total PLs in winter. Plasmalogens were identified throughout the year as a series of eleven dimethylacetals (DMAs with chain lengths between C16 and C20 (up to 14.5% of PL FAs + DMAs in winter. Thirty-seven FAs were identified in the PL FAs. Eicosapentaenoic acid (20:5n-3 EPA/7.53% to 14.5% and docosahexaenoic acid (22:6n-3 DHA/5.51% to 9.5% were the dominant polyunsaturated FAs in all seasons. Two non-methylene-interrupted dienoic (NMID FAs were identified in all seasons: 7,13-docosadienoic and 7,15-docosadienoic acids, the latter being present at relatively high levels (up to 9.6% in winter. Twenty free sterols were identified, including cholesterol at 29.9% of the sterol mixture and about 33% of phytosterols. C. gigas tissues thus contained exploitable lipids for health benefits or as a potential source of high-quality commercial lecithin.

  13. Comprehensive model of Jumbo squid Dosidicus gigas trophic ecology in the Northern Humboldt current system.

    Science.gov (United States)

    Alegre, Ana; Ménard, Frédéric; Tafur, Ricardo; Espinoza, Pepe; Argüelles, Juan; Maehara, Víctor; Flores, Oswaldo; Simier, Monique; Bertrand, Arnaud

    2014-01-01

    The jumbo squid Dosidicus gigas plays an important role in marine food webs both as predator and prey. We investigated the ontogenetic and spatiotemporal variability of the diet composition of jumbo squid in the northern Humboldt Current system. For that purpose we applied several statistical methods to an extensive dataset of 3,618 jumbo squid non empty stomachs collected off Peru from 2004 to 2011. A total of 55 prey taxa was identified that we aggregated into eleven groups. Our results evidenced a large variability in prey composition as already observed in other systems. However, our data do not support the hypothesis that jumbo squids select the most abundant or energetic taxon in a prey assemblage, neglecting the other available prey. Indeed, multinomial model predictions showed that stomach fullness increased with the number of prey taxa, while most stomachs with low contents contained one or two prey taxa only. Our results therefore question the common hypothesis that predators seek locally dense aggregations of monospecific prey. In addition D. gigas consumes very few anchovy Engraulis ringens in Peru, whereas a tremendous biomass of anchovy is potentially available. It seems that D. gigas cannot reach the oxygen unsaturated waters very close to the coast, where the bulk of anchovy occurs. Indeed, even if jumbo squid can forage in hypoxic deep waters during the day, surface normoxic waters are then required to recover its maintenance respiration (or energy?). Oxygen concentration could thus limit the co-occurrence of both species and then preclude predator-prey interactions. Finally we propose a conceptual model illustrating the opportunistic foraging behaviour of jumbo squid impacted by ontogenetic migration and potentially constrained by oxygen saturation in surface waters. PMID:24465788

  14. Comprehensive model of Jumbo squid Dosidicus gigas trophic ecology in the Northern Humboldt current system.

    Directory of Open Access Journals (Sweden)

    Ana Alegre

    Full Text Available The jumbo squid Dosidicus gigas plays an important role in marine food webs both as predator and prey. We investigated the ontogenetic and spatiotemporal variability of the diet composition of jumbo squid in the northern Humboldt Current system. For that purpose we applied several statistical methods to an extensive dataset of 3,618 jumbo squid non empty stomachs collected off Peru from 2004 to 2011. A total of 55 prey taxa was identified that we aggregated into eleven groups. Our results evidenced a large variability in prey composition as already observed in other systems. However, our data do not support the hypothesis that jumbo squids select the most abundant or energetic taxon in a prey assemblage, neglecting the other available prey. Indeed, multinomial model predictions showed that stomach fullness increased with the number of prey taxa, while most stomachs with low contents contained one or two prey taxa only. Our results therefore question the common hypothesis that predators seek locally dense aggregations of monospecific prey. In addition D. gigas consumes very few anchovy Engraulis ringens in Peru, whereas a tremendous biomass of anchovy is potentially available. It seems that D. gigas cannot reach the oxygen unsaturated waters very close to the coast, where the bulk of anchovy occurs. Indeed, even if jumbo squid can forage in hypoxic deep waters during the day, surface normoxic waters are then required to recover its maintenance respiration (or energy?. Oxygen concentration could thus limit the co-occurrence of both species and then preclude predator-prey interactions. Finally we propose a conceptual model illustrating the opportunistic foraging behaviour of jumbo squid impacted by ontogenetic migration and potentially constrained by oxygen saturation in surface waters.

  15. Symbiotic association between symbiodinium and the gastropod Strombus gigas: larval acquisition of symbionts.

    Science.gov (United States)

    García Ramos, Maribel; Banaszak, Anastazia T

    2014-04-01

    The importance of the dinoflagellate Symbiodinium sp. was studied in the early life stages of the gastropod Strombus gigas. This dinoflagellate was not found in the eggs or the gelatinous mass surrounding the eggs of the mollusk; therefore, Symbiodinium is not inherited directly. To determine whether the planktonic veligers can acquire these algae from the environment, they were exposed to freshly isolated Symbiodinium from adult S. gigas (homologous). The optimal stage for Symbiodinium inoculation was found at 48 h post-hatching. Survival and growth rates of veligers and juveniles were higher when inoculated with freshly isolated Symbiodinium in conjunction with daily feeding of Isochrysis spp. Veligers inoculated with Symbiodinium freshly isolated from three host species elicited distinct responses: (1) veligers did not take up Symbiodinium isolated from the hydrozoan Millepora alcicornis suggesting that there is discrimination on contact prior to ingestion, (2) veligers did take up Symbiodinium isolated from the anemone Bartholomea annulata, but the algae did not persist in the host tissue suggesting that selection against this type took place after ingestion or that the algae did not divide in the host, and (3) veligers did take up Symbiodinium isolated from Pterogorgia anceps where it persisted and was associated with metamorphosis of the larvae. In contrast, the Symbiodinium freshly isolated from S. gigas were not associated with metamorphosis and required an inducer such as the red alga Laurencia poitei. These data present a significant advancement for the establishment of a new approach in the aquaculture of this important but declining Caribbean species. PMID:24037186

  16. Exploitable Lipids and Fatty Acids in the Invasive Oyster Crassostrea gigas on the French Atlantic Coast.

    Science.gov (United States)

    Dagorn, Flore; Couzinet-Mossion, Aurélie; Kendel, Melha; Beninger, Peter G; Rabesaotra, Vony; Barnathan, Gilles; Wielgosz-Collin, Gaëtane

    2016-01-01

    Economic exploitation is one means to offset the cost of controlling invasive species, such as the introduced Pacific oyster (Crassostrea gigas Thunberg) on the French Atlantic coast. Total lipid and phospholipid (PL) fatty acids (FAs) and sterols were examined in an invasive population of C. gigas in Bourgneuf Bay, France, over four successive seasons, with a view to identify possible sources of exploitable substances. The total lipid level (% dry weight) varied from 7.1% (winter) to 8.6% (spring). Of this, PLs accounted for 28.1% (spring) to 50.4% (winter). Phosphatidylcholine was the dominant PL throughout the year (up to 74% of total PLs in winter). Plasmalogens were identified throughout the year as a series of eleven dimethylacetals (DMAs) with chain lengths between C16 and C20 (up to 14.5% of PL FAs + DMAs in winter). Thirty-seven FAs were identified in the PL FAs. Eicosapentaenoic acid (20:5n-3 EPA/7.53% to 14.5%) and docosahexaenoic acid (22:6n-3 DHA/5.51% to 9.5%) were the dominant polyunsaturated FAs in all seasons. Two non-methylene-interrupted dienoic (NMID) FAs were identified in all seasons: 7,13-docosadienoic and 7,15-docosadienoic acids, the latter being present at relatively high levels (up to 9.6% in winter). Twenty free sterols were identified, including cholesterol at 29.9% of the sterol mixture and about 33% of phytosterols. C. gigas tissues thus contained exploitable lipids for health benefits or as a potential source of high-quality commercial lecithin. PMID:27231919

  17. cDNA-AFLP analysis of gene expression differences between the flower bud and sprout-shoot apical meristem of Angelica sinensis (Oliv. Diels

    Directory of Open Access Journals (Sweden)

    Yu Guang

    2011-01-01

    Full Text Available Angelica sinensis (Oliv. Diels (Umbelliferae is a well-known medicinal plant mainly distributed in Gansu Province of China. Its local and global demand is significant because of its food and medicinal applications. However, the early bolting rate of Angelica sinensis (Oliv. Diels reaches 20%-60%, which seriously affects its food and medicinal qualities. Thus, differences in gene expression between the flower bud and sprout-shoot apical meristem underwent analysis, by means of cDNA-amplified restriction fragment length polymorphism, to better understand the flowering mechanism. 64 primer sets, each of which amplified to 60 transcript-derived fragments (TDFs, were used. Among these TDFs, 26 were expressed specifically in the flower bud. After cloning and sequencing, 32 distinct sequences were obtained from these 26 TDFs, and 25 were found with homologous sequences in databases. Confirmation of differential expression of 13 sequences was obtained by semi-quantitative RT-PCR, their showing higher expression levels in flower buds. These homologous sequences encode transposable elements, pentatricopeptide repeat-containing proteins, DNA-binding transcription factors, zinc finger (B-box type family proteins, NADP-dependent sorbitol 6-phosphate dehydrogenase (S6PDH, amongst others.

  18. Chronic administration of Angelica sinensis polysaccharide effectively improves fatty liver and glucose homeostasis in high-fat diet-fed mice.

    Science.gov (United States)

    Wang, Kaiping; Cao, Peng; Wang, Hanxiang; Tang, Zhuohong; Wang, Na; Wang, Jinglin; Zhang, Yu

    2016-01-01

    This study aimed to investigate the therapeutic effects of Angelica sinensis polysaccharide (ASP), an active component derived from a water extract of Angelica sinensis, in high-fat diet (HFD)-fed BALB/c mice. The potential mechanisms underlying the activity of this compound were also considered. Specifically, serum and hepatic biochemical parameters were evaluated, and key proteins involved in the lipid/glucose metabolism were analyzed. Long-term feeding with a HFD induced severe fatty liver and hyperglycemia. Histological examination clearly showed that ASP reduced lipid accumulation in the liver and attenuated hepatic steatosis in HFD-fed mice. In addition, ASP markedly alleviated serum and liver lipid disorders and fatty liver via the upregulation of PPARγ expression and the activation of adiponectin-SIRT1-AMPK signaling. Furthermore, ASP also significantly relieved severe oxidative stress, demonstrating that ASP might attenuate nonalcoholic fatty liver disease via a "two-hit" mechanism. In addition, ASP reduced blood glucose levels and ameliorated insulin resistance via the regulation of related metabolic enzymes and by activating the PI3K/Akt pathway in HFD-fed mice. Our findings revealed that ASP might be used as an alternative dietary supplement or health care product to ameliorate metabolic syndrome in populations that consistently consume HFDs. PMID:27189109

  19. Giga-Pixel Lensfree Holographic Microscopy and Tomography Using Color Image Sensors

    OpenAIRE

    Isikman, Serhan O.; Greenbaum, Alon; Luo, Wei; Coskun, Ahmet F.; Ozcan, Aydogan

    2012-01-01

    We report Giga-pixel lensfree holographic microscopy and tomography using color sensor-arrays such as CMOS imagers that exhibit Bayer color filter patterns. Without physically removing these color filters coated on the sensor chip, we synthesize pixel super-resolved lensfree holograms, which are then reconstructed to achieve ∼350 nm lateral resolution, corresponding to a numerical aperture of ∼0.8, across a field-of-view of ∼20.5 mm2. This constitutes a digital image with ∼0.7 Billion effecti...

  20. Tagging studies on the jumbo squid (Dosidicus gigas) in the Gulf of California, Mexico

    OpenAIRE

    Markaida, Unai; Rosenthal, Joshua J. C.; Gilly, William F

    2005-01-01

    Dosidicus gigas, the only species in the genus Dosidicus, is commonly known as the jumbo squid, jumbo flying squid (FAO, see Roper et al., 1984), or Humboldt squid. It is the largest ommastrephid squid and is endemic to the Eastern Pacific, ranging from northern California to southern Chile and to 140oW at the equator (Nesis, 1983; Nigmatullin, et al., 2001). During the last two decades it has become an extremely important fisheries resource in the Gulf of California (Ehrhardt et al., 1983; M...

  1. Invasive range expansion by the Humboldt squid, Dosidicus gigas, in the eastern North Pacific.

    Science.gov (United States)

    Zeidberg, Louis D; Robison, Bruce H

    2007-07-31

    A unique 16-year time series of deep video surveys in Monterey Bay reveals that the Humboldt squid, Dosidicus gigas, has substantially expanded its perennial geographic range in the eastern North Pacific by invading the waters off central California. This sustained range expansion coincides with changes in climate-linked oceanographic conditions and a reduction in competing top predators. It is also coincident with a decline in the abundance of Pacific hake, the most important commercial groundfish species off western North America. Recognizing the interactive effects of multiple changes in the environment is an issue of growing concern in ocean conservation and sustainability research. PMID:17646649

  2. Massive settlements of the Pacific oyster, Crassostrea gigas, in Scandinavia : Invasion note

    DEFF Research Database (Denmark)

    Wrange, Anna-Lisa; Valero, Johanna; Harkestad, Lisbeth S.;

    2010-01-01

    the establishment of Pacific oysters in Scandinavia. However, recent surveys reveal that the Pacific oyster is now established in many areas in Scandinavia. The biomass of oysters in the Danish Wadden Sea has increased dramatically between 2005 and 2007, large numbers were observed along the Swedish......The Pacific oyster (Crassostrea gigas) is an important aquaculture species world-wide. Due to its wide environmental tolerance and high growth rate, it has also become a successful invader in many areas, leading to major ecosystem changes. Low water temperatures were previously believed to restrict...

  3. Massive settlements of the Pacific oyster, Crassostrea gigas, in Scandinavia : Original paper

    DEFF Research Database (Denmark)

    Wrange, Anna-Lisa; Valero, Johanna; Harkestad, Lisbeth S.;

    2010-01-01

    the establishment of Pacific oysters in Scandinavia. However, recent surveys reveal that the Pacific oyster is now established in many areas in Scandinavia. The biomass of oysters in the Danish Wadden Sea has increased dramatically between 2005 and 2007, large numbers were observed along the Swedish......The Pacific oyster (Crassostrea gigas) is an important aquaculture species world-wide. Due to its wide environmental tolerance and high growth rate, it has also become a successful invader in many areas, leading to major ecosystem changes. Low water temperatures were previously believed to restrict...

  4. Impact of an icy winter on the Pacific oyster (Crassostrea gigas Thunberg, 1793) populations in Scandinavia

    DEFF Research Database (Denmark)

    Strand, Åsa; Blanda, Elisa; Bodvin, Torjan; Davids, Jens K.; Fast Jensen, Lasse; Holm-Hansen, Tore Hejl; Hjelmert, Anders; Lindegarth, Susanne; Mortensen, Stein; Moy, Frithjof E.; Nielsen, Pernille; Norling, Pia; Nyberg, Carlo; Christensen, Helle Torp; Vismann, Bent; Wejlemann Holm, Mark; Winding Hansen, Benny; Dolmer, Per

    2012-01-01

    The Pacific oyster (Crassostrea gigas) is an invasive species that has dispersed into Scandinavia during the last few decades. The objective of this study was to evaluate the effects of extreme winter conditions on the mortality of the Pacific oyster in Scandinavia. The study was done by compiling...... sampling sites of oyster populations. Despite the severe winter conditions of 2009/2010 causing high mortality, the Pacific oyster still exists in large numbers in Scandinavia. The present investigation indicates that extreme winter conditions may result in a temporary reduction of the density of the...... Pacific oyster, but that the species can be expected to continue its invasion of Scandinavian coastal areas...

  5. Gigabit Access Passive Optical Network Using Wavelength Division Multiplexing—GigaWaM

    DEFF Research Database (Denmark)

    Iglesias Olmedo, Miguel; Suhr, Lau; Prince, Kamau;

    2014-01-01

    This paper summarizes the research and technical achievements done under the EU project GigaWaM. The goal of this project was to develop a cost-effective solution that can meet the increasing bandwidth demands in access networks. The approach was to use a novel wavelength division multiplexing pa......-effective, flexible, and upgradable WDM-PON solution, achieving per-user datarates of 2.5 and 10 Gb/s for up and downstream, respectively. The proposed solution is not only suitable for access networks, but also for metro aggregation and mobile backhaul....

  6. Giga-z: A 100,000 OBJECT SUPERCONDUCTING SPECTROPHOTOMETER FOR LSST FOLLOW-UP

    Energy Technology Data Exchange (ETDEWEB)

    Marsden, Danica W.; Mazin, Benjamin A. [Department of Physics, University of California, Santa Barbara, CA 93106 (United States); O' Brien, Kieran [Department of Physics, University of Oxford, Denys Wilkinson Building, Keble Road, Oxford OX1 3RH (United Kingdom); Hirata, Chris [Department of Astrophysics, California Institute of Technology, 1216 East California Boulevard, Pasadena, CA 91106 (United States)

    2013-09-15

    We simulate the performance of a new type of instrument, a Superconducting Multi-Object Spectrograph (SuperMOS), that uses microwave kinetic inductance detectors (MKIDs). MKIDs, a new detector technology, feature good quantum efficiency in the UVOIR, can count individual photons with microsecond timing accuracy, and, like X-ray calorimeters, determine their energy to several percent. The performance of Giga-z, a SuperMOS designed for wide field imaging follow-up observations, is evaluated using simulated observations of the COSMOS mock catalog with an array of 100,000 R{sub 423{sub nm}} = E/{Delta}E = 30 MKID pixels. We compare our results against a simultaneous simulation of LSST observations. In 3 yr on a dedicated 4 m class telescope, Giga-z could observe Almost-Equal-To 2 billion galaxies, yielding a low-resolution spectral energy distribution spanning 350-1350 nm for each; 1000 times the number measured with any currently proposed LSST spectroscopic follow-up, at a fraction of the cost and time. Giga-z would provide redshifts for galaxies up to z Almost-Equal-To 6 with magnitudes m{sub i} {approx}< 25, with accuracy {sigma}{sub {Delta}z/(1+z)} Almost-Equal-To 0.03 for the whole sample, and {sigma}{sub {Delta}z/(1+z)} Almost-Equal-To 0.007 for a select subset. We also find catastrophic failure rates and biases that are consistently lower than for LSST. The added constraint on dark energy parameters for WL + CMB by Giga-z using the FoMSWG default model is equivalent to multiplying the LSST Fisher matrix by a factor of {alpha} = 1.27 (w{sub p} ), 1.53 (w{sub a} ), or 1.98 ({Delta}{gamma}). This is equivalent to multiplying both the LSST coverage area and the training sets by {alpha} and reducing all systematics by a factor of 1/{radical}({alpha}), advantages that are robust to even more extreme models of intrinsic alignment.

  7. Dynamique et enzymologie de la digestion chez l'huitre Crassostrea gigas

    OpenAIRE

    Boucaud, C; Lebesnerais, C; Lubet, P.; Lihrmann, I

    1983-01-01

    Chez Crassostrea gigas (Thunberg) des expériences d'alimentation contrôlée ont permis d'établir les modalités et la chronologie du transit alimentaire. Différentes activités enzymatiques en relation avec la digestion (glycosidases, esterases et peptidases) ont été localisées dans l'appareil digestif et ont permis de préciser les sites de digestion des glucides et des protides et les sites d'absorption. Un schéma explicatif des différentes étapes de la digestion est proposé.

  8. Cloning, characterization and chromosomal location of a satellite DNA from the Pacific oyster, Crassostrea gigas

    Digital Repository Service at National Institute of Oceanography (India)

    Clabby, C.; Goswami, U.; Flavin, F.; Wilkins, N.P.; Houghton, J.A; Powell, R.

    of genetic information. Annu. Rev. Biochem. 55 (1986) 631-661. Wijers, E.R., Zijlstra, C. and Lenstra, J.A.: Rapid evolution of horse satellite DNA. Genomics 18 (1993) 113-117. Wisconsin Package: Program manual for Wisconsin Package Version 8, September... Elsevier Science B.V. All rights reserved. 0378-1119/96/$15.00 205 GENE 09452 Cloning, characterization and chromosomal location of a satellite DNA from the Pacific oyster, Crassostrea gigas (HaelII and FokI repeated DNA; tandem repetition; genomic...

  9. A Radiation Tolerant 4.8 Gb/s Serializer for the Giga-Bit Transceiver

    CERN Document Server

    Çobanoglu, Ö; Faccio, F

    2009-01-01

    This paper describes the design of a full-custom 120:1 data serializer for the GigaBit Transceiver (GBT) which has been under development for the LHC upgrade (SLHC). The circuit operates at 4.8 Gb=s and is implemented in a commercial 130 nm CMOS technology. The serializer occupies an area of 0.6 mm2 and its power consumption is 300 mW. The paper focuses on the techniques used to achieve radiation tolerance and on the simulation method used to estimate the sensitivity to single event transients

  10. 华为发布业界首款Giga DSL样机

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    全球领先的信息与通信解决方案供应商华为日前宣布,其FBB(FixedBroadband)创新实验室已成功研制出业界首款GigaDSL样机,该系统划时代地在单线对双绞线上通过TDD全双工方式实现了上下行1Gbit/s的接入速率。

  11. Queen conch (Strombus gigas testis regresses during the reproductive season at nearshore sites in the Florida Keys.

    Directory of Open Access Journals (Sweden)

    Daniel J Spade

    Full Text Available BACKGROUND: Queen conch (Strombus gigas reproduction is inhibited in nearshore areas of the Florida Keys, relative to the offshore environment where conchs reproduce successfully. Nearshore reproductive failure is possibly a result of exposure to environmental factors, including heavy metals, which are likely to accumulate close to shore. Metals such as Cu and Zn are detrimental to reproduction in many mollusks. METHODOLOGY/PRINCIPAL FINDINGS: Histology shows gonadal atrophy in nearshore conchs as compared to reproductively healthy offshore conchs. In order to determine molecular mechanisms leading to tissue changes and reproductive failure, a microarray was developed. A normalized cDNA library for queen conch was constructed and sequenced using the 454 Life Sciences GS-FLX pyrosequencer, producing 27,723 assembled contigs and 7,740 annotated transcript sequences. The resulting sequences were used to design the microarray. Microarray analysis of conch testis indicated differential regulation of 255 genes (p<0.01 in nearshore conch, relative to offshore. Changes in expression for three of four transcripts of interest were confirmed using real-time reverse transcription polymerase chain reaction. Gene Ontology enrichment analysis indicated changes in biological processes: respiratory chain (GO:0015992, spermatogenesis (GO:0007283, small GTPase-mediated signal transduction (GO:0007264, and others. Inductively coupled plasma-mass spectrometry analysis indicated that Zn and possibly Cu were elevated in some nearshore conch tissues. CONCLUSIONS/SIGNIFICANCE: Congruence between testis histology and microarray data suggests that nearshore conch testes regress during the reproductive season, while offshore conch testes develop normally. Possible mechanisms underlying the testis regression observed in queen conch in the nearshore Florida Keys include a disruption of small GTPase (Ras-mediated signaling in testis development. Additionally, elevated tissue

  12. IDENTIFICACIÓN MOLECULAR DE POBLACIONES BACTERIANAS ASOCIADAS AL CARACOL PALA (Strombus gigas DEL CARIBE COLOMBIANO Molecular Identification Of Bacterial Populations Associated To Queen Conch (Strombus gigas From Colombian Caribbe

    Directory of Open Access Journals (Sweden)

    EDINSON ANDRÉS ACOSTA

    Full Text Available El caracol Pala, Strombus gigas (Strombidae, es de gran importancia ecológica y socioeconómica en el área caribeña colombiana. Sin embargo, es una especie catalogada como "vulnerable" y existe muy poca información referente a las especies bacterianas asociadas al caracol que puedan ser importantes para el desarrollo, manejo productivo y de seguridad acuícola de estos gastrópodos. En este trabajo, nosotros empleamos un estudio microbiológico y molecular de la región intergénica entre los genes 16S y 23S rDNA, análisis del gen rDNA 16S y secuenciación, para analizar las bacterias asociadas al caracol Pala (S. gigas. La composición de bacterias cultivables asociadas fue evaluada por su capacidad para crecer en agar marino y en medios de cultivos selectivos. De un total de 28 muestras analizadas encontramos que el número de bacterias cultivadas en condiciones aerobias fue de alrededor 10(6 ufc mL-1 donde las bacterias pertenecientes a la familia Vibrionacea fueron las más abundantes, cerca de >10(5 ufc mL-1. El análisis molecular de la región intergénica entre los genes 16S y 23S rDNA de las diferentes muestras, reveló una gran complejidad bacteriana asociada a S. gigas. Las secuencias de los amplificados del gen rDNA 16S identificó Pseudoalteromonas sp., Halomonas sp., Psycrobacter sp., Cobetia sp., Pseudomonas sp. y Vibrios sp. Nuestros resultados podrían sugerir un rol importante de estas bacterias como componentes de la comunidad asociada al S. gigas. Esta información puede complementar los estudios que se están implementando en los procesos para la conservación y repoblamiento de las poblaciones de S. gigas en Colombia.The Queen Conch, Strombus gigas (Strombidae, is a species of great ecological and socioeconomic importance in the Caribbean area of Colombia. However, it is currently catalogued as "vulnerable"; there is limited information concerning the bacterial species associated with conch and important in the

  13. The Rehbinder effect in iron during giga-cycle fatigue loading

    Energy Technology Data Exchange (ETDEWEB)

    Bannikov, M. V., E-mail: mbannikov@icmm.ru; Naimark, O. B. [Institute of Continuous Media Mechanics UrB RAS, Perm, 614013 (Russian Federation)

    2015-10-27

    The influence of the adsorptive strength reduction effect (the Rehbinder effect) on the fatigue life of pure iron under the giga-cycle loading regime was investigated. Specimens were loaded by an ultrasonic testing machine with a frequency of 20 kHz in air and in contact with eutectic alloy of gallium with tin and indium. A significant (by several orders of magnitude) worsening of the life-time of iron in contact with a molten metal as compared with tests in air was established. The liquid metal penetrates into the material to a depth of 200 μm to the center of a fatigue crack. The mechanism of the fatigue crack initiation in the giga-cycle regime of loading in contact with a surfactant is differing: the crack is formed on the surface of the specimen rather than within it as is the case for air. Based on the electron and optical microscopy data for the fracture surface, it can be concluded that exactly the change in the crack initiation mechanism reduces the fatigue life of iron in contact with a liquid metal because the initiated crack propagates regardless of the surfactant.

  14. Growth and reproductive investment of introduced Pacific oysters Crassostrea gigas in southern European waters

    Science.gov (United States)

    Cardoso, Joana F. M. F.; Peralta, Nelson R. E.; Machado, Jorge P.; van der Veer, Henk W.

    2013-02-01

    Growth and reproductive investment of cultured Pacific oysters Crassostrea gigas were studied in two south-western European estuaries: the Ría de Ribadeo in Spain and the Ria Formosa in Portugal. Developing gonads were found in individuals >23.5 mm shell length in the Ria Formosa and >27.5 mm shell length in the Ría de Ribadeo. Although the amount of gonadal mass in relation to total body mass was higher in the Ría de Ribadeo, oysters from this location did not spawn completely. In contrast, oysters from the Ria Formosa completely emptied their gonad during spawning. Reproduction and, consequently, the maximum potential for population expansion may be constrained in both areas: in the Ría de Ribadeo due to suboptimal spawning threshold temperatures and in the Ria Formosa due to higher metabolic costs caused by warmer winter temperatures. Nevertheless, in comparison to northern oyster populations, Portuguese and Spanish populations have higher reproductive output. If suitable environmental conditions are met, expansion of Portuguese and Spanish populations will most likely occur. In the Ria Formosa, where environmental conditions for growth and reproduction are favourable, wild oysters are already observed. In order to follow the dynamics of oyster populations and predict possible negative effects on the ecosystems, it is important to continue monitoring the physiological performance of C. gigas in these areas.

  15. Distinct immune responses of juvenile and adult oysters (Crassostrea gigas) to viral and bacterial infections.

    Science.gov (United States)

    Green, Timothy J; Vergnes, Agnes; Montagnani, Caroline; de Lorgeril, Julien

    2016-01-01

    Since 2008, massive mortality events of Pacific oysters (Crassostrea gigas) have been reported worldwide and these disease events are often associated with Ostreid herpesvirus type 1 (OsHV-1). Epidemiological field studies have also reported oyster age and other pathogens of the Vibrio genus are contributing factors to this syndrome. We undertook a controlled laboratory experiment to simultaneously investigate survival and immunological response of juvenile and adult C. gigas at different time-points post-infection with OsHV-1, Vibrio tasmaniensis LGP32 and V. aestuarianus. Our data corroborates epidemiological studies that juveniles are more susceptible to OsHV-1, whereas adults are more susceptible to Vibrio. We measured the expression of 102 immune-genes by high-throughput RT-qPCR, which revealed oysters have different transcriptional responses to OsHV-1 and Vibrio. The transcriptional response in the early stages of OsHV-1 infection involved genes related to apoptosis and the interferon-pathway. Transcriptional response to Vibrio infection involved antimicrobial peptides, heat shock proteins and galectins. Interestingly, oysters in the later stages of OsHV-1 infection had a transcriptional response that resembled an antibacterial response, which is suggestive of the oyster's microbiome causing secondary infections (dysbiosis-driven pathology). This study provides molecular evidence that oysters can mount distinct immune response to viral and bacterial pathogens and these responses differ depending on the age of the host. PMID:27439510

  16. Reversible stress softening of collagen based networks from the jumbo squid mantle (Dosidicus gigas)

    Energy Technology Data Exchange (ETDEWEB)

    Torres, F.G., E-mail: fgtorres@pucp.edu.pe [Department of Mechanical Engineering, Catholic University of Peru, Lima 32 (Peru); Troncoso, O.P.; Rivas, E.R. [Department of Mechanical Engineering, Catholic University of Peru, Lima 32 (Peru); Gomez, C.G. [Departament de Química Física and Institut de Ciencia dels Materials, Universitat de València, Dr. Moliner 50, Burjassot, E-46100 Valencia (Spain); Lopez, D. [Instituto de Ciencia y Tecnología de Polímeros, C.S.I.C., Calle Juan de la Cierva 3, 28006 Madrid (Spain)

    2014-04-01

    Dosidicus gigas is the largest and one of the most abundant jumbo squids in the eastern Pacific Ocean. In this paper we have studied the muscle of the mantle of D. gigas (DGM). Morphological, thermal and rheological properties were assessed by means of atomic force microscopy, scanning electron microscopy, energy-dispersive X-ray spectroscopy, differential scanning calorimetry, thermogravimetry and oscillatory rheometry. This study allowed us to assess the morphological and rheological properties of a collagen based network occurring in nature. The results showed that the DGM network displays a nonlinear effect called reversible stress softening (RSS) that has been previously described for other types of biological structures such as naturally occurring cellulose networks and actin networks. We propose that the RSS could play a key role on the way jumbo squids withstand hydrostatic pressure. The results presented here confirm that this phenomenon occurs in a wider number of materials than previously thought, all of them exhibiting different size scales as well as physical conformation. - Highlights: • We studied the structure property relationships of the jumbo squid mantle. • Rheological tests showed that such a mantle exhibits reversible stress softening (RSS). • RSS could also play a role on the way jumbo squids withstand hydrostatic pressure.

  17. Reversible stress softening of collagen based networks from the jumbo squid mantle (Dosidicus gigas)

    International Nuclear Information System (INIS)

    Dosidicus gigas is the largest and one of the most abundant jumbo squids in the eastern Pacific Ocean. In this paper we have studied the muscle of the mantle of D. gigas (DGM). Morphological, thermal and rheological properties were assessed by means of atomic force microscopy, scanning electron microscopy, energy-dispersive X-ray spectroscopy, differential scanning calorimetry, thermogravimetry and oscillatory rheometry. This study allowed us to assess the morphological and rheological properties of a collagen based network occurring in nature. The results showed that the DGM network displays a nonlinear effect called reversible stress softening (RSS) that has been previously described for other types of biological structures such as naturally occurring cellulose networks and actin networks. We propose that the RSS could play a key role on the way jumbo squids withstand hydrostatic pressure. The results presented here confirm that this phenomenon occurs in a wider number of materials than previously thought, all of them exhibiting different size scales as well as physical conformation. - Highlights: • We studied the structure property relationships of the jumbo squid mantle. • Rheological tests showed that such a mantle exhibits reversible stress softening (RSS). • RSS could also play a role on the way jumbo squids withstand hydrostatic pressure

  18. Reversible stress softening of collagen based networks from the jumbo squid mantle (Dosidicus gigas).

    Science.gov (United States)

    Torres, F G; Troncoso, O P; Rivas, E R; Gomez, C G; Lopez, D

    2014-04-01

    Dosidicus gigas is the largest and one of the most abundant jumbo squids in the eastern Pacific Ocean. In this paper we have studied the muscle of the mantle of D. gigas (DGM). Morphological, thermal and rheological properties were assessed by means of atomic force microscopy, scanning electron microscopy, energy-dispersive X-ray spectroscopy, differential scanning calorimetry, thermogravimetry and oscillatory rheometry. This study allowed us to assess the morphological and rheological properties of a collagen based network occurring in nature. The results showed that the DGM network displays a nonlinear effect called reversible stress softening (RSS) that has been previously described for other types of biological structures such as naturally occurring cellulose networks and actin networks. We propose that the RSS could play a key role on the way jumbo squids withstand hydrostatic pressure. The results presented here confirm that this phenomenon occurs in a wider number of materials than previously thought, all of them exhibiting different size scales as well as physical conformation. PMID:24582216

  19. Behavioral ecology of jumbo squid (Dosidicus gigas) in relation to oxygen minimum zones

    Science.gov (United States)

    Stewart, Julia S.; Field, John C.; Markaida, Unai; Gilly, William F.

    2013-10-01

    Habitat utilization, behavior and food habits of the jumbo or Humboldt squid, Dosidicus gigas, were compared between an area recently inhabited in the northern California Current System (CCS) and a historically established area of residence in the Gulf of California (GOC). Low dissolved oxygen concentrations at midwater depths define the oxygen minimum zone (OMZ), an important environmental feature in both areas. We analyzed vertical diving behavior and diet of D. gigas and hydrographic properties of the water column to ascertain the extent to which squid utilized the OMZ in the two areas. The upper boundary of the OMZ has been shoaling in recent decades in the CCS, and this phenomenon has been proposed to vertically compress the pelagic environment inhabited by aerobic predators. A shoaling OMZ will also bring mesopelagic communities into a depth range with more illumination during daytime, making these organisms more vulnerable to predation by visual predators (i.e. jumbo squid). Because the OMZ in the GOC is considerably shallower than in the CCS, our study provides insight into the behavioral plasticity of jumbo squid and how they may respond to a shoaling OMZ in the CCS. We propose that shoaling OMZs are likely to be favorable to jumbo squid and could be a key indirect factor behind the recent range expansion of this highly migratory predator.

  20. Genetics of the Steller's Sea Cow (Hydrodamalis gigas): A Study of Ancient Bone Material

    Science.gov (United States)

    Crerar, Lorelei D.

    Georg Wilhelm Steller was born 100 years before Darwin in 1709 and he was part of a vast exploration fifty years before Lewis and Clark explored America. Steller was important to the study of marine mammals because he was the only naturalist to see and describe the great northern sea cow ( Hydrodamalis gigas). Knowledge of an extinct population can be used to aid the conservation of a current population. Extraction of DNA from this extinct animal was performed in order to determine the population structure of the Steller's sea cow. A test was also developed that can definitively state whether or not a random bone sample came from H. gigas. This test could be used by the Fish and Wildlife Service (FWS) and the National Oceanic and Atmospheric Administration (NOAA) to examine material distributed in the North Pacific to determine whether samples are legally traded extinct Steller's sea cow or illegally traded extant marine mammal species protected under the Marine Mammal Protection Act (MMPA).

  1. Occurrence of Apicomplexa-like structures in the digestive gland of Strombus gigas throughout the Caribbean.

    Science.gov (United States)

    Aranda, Dalila Aldana; Frenkiel, Liliane; Brulé, Thierry; Montero, Jorge; Cárdenas, Erick Baqueiro

    2011-02-01

    The queen conch, Strombus gigas, is a marine resource of ecological and economical importance in the Caribbean region. Given its importance in this region, and the critical status of most populations, the reproductive biology of this species has been studied to support management decisions. It was from these studies that a generalized sporozoan infection was detected. This study describes the geographic distribution of a coccidian (Apicomplexa) parasite infecting the digestive gland of S. gigas throughout the Caribbean. The parasite was present in every location sampled. Based on histological analysis, the parasites from all locations are similar and appear to complete their life cycle within the digestive gland. The highest occurrence of the parasites was registered in samples from Puerto Rico (54 parasites per field) and Martinique (45 parasites per field). The lowest incidence was registered on the Mexican coast of Yucatan peninsula, at Alacranes and Chinchorro with 17 parasites per field. Data showed significant differences among sites (Kruskal Wallis H=106.957; p ≤ 0.05). The abundance of parasites found in the digestive ducts and in the faeces suggests the liberation of parasites to the environment. A gradual decrease in abundance was found from East to West of the Caribbean sea. PMID:20851703

  2. Structural basis for the fracture toughness of the shell of the conch Strombus gigas

    Science.gov (United States)

    Kamat, S.; Su, X.; Ballarini, R.; Heuer, A. H.

    2000-06-01

    Natural composite materials are renowned for their mechanical strength and toughness: despite being highly mineralized, with the organic component constituting not more than a few per cent of the composite material, the fracture toughness exceeds that of single crystals of the pure mineral by two to three orders of magnitude. The judicious placement of the organic matrix, relative to the mineral phase, and the hierarchical structural architecture extending over several distinct length scales both play crucial roles in the mechanical response of natural composites to external loads. Here we use transmission electron microscopy studies and beam bending experiments to show that the resistance of the shell of the conch Strombus gigas to catastrophic fracture can be understood quantitatively by invoking two energy-dissipating mechanisms: multiple microcracking in the outer layers at low mechanical loads, and crack bridging in the shell's tougher middle layers at higher loads. Both mechanisms are intimately associated with the so-called crossed lamellar microarchitecture of the shell, which provides for `channel' cracking in the outer layers and uncracked structural features that bridge crack surfaces, thereby significantly increasing the work of fracture, and hence the toughness, of the material. Despite a high mineral content of about 99% (by volume) of aragonite, the shell of Strombus gigas can thus be considered a `ceramic plywood', and can guide the biomimetic design of tough, lightweight structures.

  3. The Rehbinder effect in iron during giga-cycle fatigue loading

    Science.gov (United States)

    Bannikov, M. V.; Naimark, O. B.

    2015-10-01

    The influence of the adsorptive strength reduction effect (the Rehbinder effect) on the fatigue life of pure iron under the giga-cycle loading regime was investigated. Specimens were loaded by an ultrasonic testing machine with a frequency of 20 kHz in air and in contact with eutectic alloy of gallium with tin and indium. A significant (by several orders of magnitude) worsening of the life-time of iron in contact with a molten metal as compared with tests in air was established. The liquid metal penetrates into the material to a depth of 200 μm to the center of a fatigue crack. The mechanism of the fatigue crack initiation in the giga-cycle regime of loading in contact with a surfactant is differing: the crack is formed on the surface of the specimen rather than within it as is the case for air. Based on the electron and optical microscopy data for the fracture surface, it can be concluded that exactly the change in the crack initiation mechanism reduces the fatigue life of iron in contact with a liquid metal because the initiated crack propagates regardless of the surfactant.

  4. The Rehbinder effect in iron during giga-cycle fatigue loading

    International Nuclear Information System (INIS)

    The influence of the adsorptive strength reduction effect (the Rehbinder effect) on the fatigue life of pure iron under the giga-cycle loading regime was investigated. Specimens were loaded by an ultrasonic testing machine with a frequency of 20 kHz in air and in contact with eutectic alloy of gallium with tin and indium. A significant (by several orders of magnitude) worsening of the life-time of iron in contact with a molten metal as compared with tests in air was established. The liquid metal penetrates into the material to a depth of 200 μm to the center of a fatigue crack. The mechanism of the fatigue crack initiation in the giga-cycle regime of loading in contact with a surfactant is differing: the crack is formed on the surface of the specimen rather than within it as is the case for air. Based on the electron and optical microscopy data for the fracture surface, it can be concluded that exactly the change in the crack initiation mechanism reduces the fatigue life of iron in contact with a liquid metal because the initiated crack propagates regardless of the surfactant

  5. Nanoemitter of giga- and terahertz ranges based on a carbon peapod: Numerical simulation

    Science.gov (United States)

    Glukhova, O. E.; Kolesnikova, A. S.; Nefedov, I. S.; Slepchenkov, M. M.

    2014-05-01

    A mathematical model of a nanoemitter for the giga- and terahertz ranges based on a carbon nanopeapod formed by a (10, 10) nanotube with encapsulated C60 fullerenes has been proposed. The fundamental possibility of the generation of giga- and terahertz radiation by a charged free fullerene oscillating in the potential well created by the atomic framework of the nanotube and several fullerenes polymerized with its walls and with each other has been proven. The radiation frequency is controlled by means of an external electric field. The dependence of the amplitude and frequency of oscillations on the charge of C60 and on the external field strength has been revealed by the molecular dynamics method. If the fullerene has a charge of +1 e or +2 e, it emits electromagnetic waves only in the gigahertz range in strong external fields. At the same time, the physical conditions under which the frequency of radiation can be 0.36 GHz have been established: the charge of the fullerene must be +3 e, the tube should be oriented strictly along the external field lines, and the strength should be 0.1 V/nm.

  6. Coexistence of Pacific oyster Crassostrea gigas (Thunberg, 1793) and blue mussels Mytilus edulis Linnaeus, 1758 on a sheltered intertidal bivalve bed?

    DEFF Research Database (Denmark)

    Holm, M.W.; Davids, J.K.; Dolmer, Per;

    2016-01-01

    and M. edulis were collected from the bivalve bed, shell lengths were converted into biomass, which were interpolated to create biomass contours and combined with modelled topography of the bivalve bed to study niche separation. The bivalve bed slowly extended northwards over a period of 11 years, where......, and as C. gigas have been present in the ecosystem for more than 40 years, we hypothesize that the presence of C. gigas has altered the spatial and temporal distribution of M. edulis by inducing a niche separation. The spatiotemporal development of the bivalve bed was determined using orthophotos. C. gigas...

  7. Use of laboratory assays to predict subsequent growth and survival of Pacific oyster (Crassostrea gigas) families planted in coastal waters

    Science.gov (United States)

    Selective breeding programs for improving Pacific oyster (Crassostrea gigas) stocks are expensive, labor-intensive, and rely on lengthy field trials that are subject to stochastic outbreaks of Summer Mortality Syndrome. Laboratory assays that identify and eliminate poor-performing families prior to...

  8. Suivi de la reproduction de l'huître creuse Crassostrea gigas Secteur de Fouras 2000

    OpenAIRE

    2000-01-01

    In the framework of the actions conducted by the Ifremer for Regional Shellfish Culture Section of Ré Centre-Ouest in 2000, the DEL coastal laboratory of La Rochelle carried out a monitoring of the reproduction of the cupped oyster "Crassostrea gigas" in Fouras. This report briefly presents the obtained results.

  9. Genomic analysis of the Pacific oyster (Crassostrea gigas) reveals possible conservation of vertebrate sex determination in a mollusc.

    Science.gov (United States)

    Zhang, Na; Xu, Fei; Guo, Ximing

    2014-11-01

    Despite the prevalence of sex in animal kingdom, we have only limited understanding of how sex is determined and evolved in many taxa. The mollusc Pacific oyster Crassostrea gigas exhibits complex modes of sexual reproduction that consists of protandric dioecy, sex change, and occasional hermaphroditism. This complex system is controlled by both environmental and genetic factors through unknown molecular mechanisms. In this study, we investigated genes related to sex-determining pathways in C. gigas through transcriptome sequencing and analysis of female and male gonads. Our analysis identified or confirmed novel homologs in the oyster of key sex-determining genes (SoxH or Sry-like and FoxL2) that were thought to be vertebrate-specific. Their expression profile in C. gigas is consistent with conserved roles in sex determination, under a proposed model where a novel testis-determining CgSoxH may serve as a primary regulator, directly or indirectly interacting with a testis-promoting CgDsx and an ovary-promoting CgFoxL2. Our findings plus previous results suggest that key vertebrate sex-determining genes such as Sry and FoxL2 may not be inventions of vertebrates. The presence of such genes in a mollusc with expression profiles consistent with expected roles in sex determination suggest that sex determination may be deeply conserved in animals, despite rapid evolution of the regulatory pathways that in C. gigas may involve both genetic and environmental factors. PMID:25213692

  10. Exposure to the Paralytic Shellfish Toxin Producer Alexandrium catenella Increases the Susceptibility of the Oyster Crassostrea gigas to Pathogenic Vibrios.

    Science.gov (United States)

    Abi-Khalil, Celina; Lopez-Joven, Carmen; Abadie, Eric; Savar, Veronique; Amzil, Zouher; Laabir, Mohamed; Rolland, Jean-Luc

    2016-01-01

    The multifactorial etiology of massive Crassostrea gigas summer mortalities results from complex interactions between oysters, opportunistic pathogens and environmental factors. In a field survey conducted in 2014 in the Mediterranean Thau Lagoon (France), we evidenced that the development of the toxic dinoflagellate Alexandrium catenella, which produces paralytic shellfish toxins (PSTs), was concomitant with the accumulation of PSTs in oyster flesh and the occurrence of C. gigas mortalities. In order to investigate the possible role of toxic algae in this complex disease, we experimentally infected C. gigas oyster juveniles with Vibrio tasmaniensis strain LGP32, a strain associated with oyster summer mortalities, after oysters were exposed to Alexandrium catenella. Exposure of oysters to A. catenella significantly increased the susceptibility of oysters to V. tasmaniensis LGP32. On the contrary, exposure to the non-toxic dinoflagellate Alexandrium tamarense or to the haptophyte Tisochrysis lutea used as a foraging alga did not increase susceptibility to V. tasmaniensis LGP32. This study shows for the first time that A. catenella increases the susceptibility of Crassostrea gigas to pathogenic vibrios. Therefore, in addition to complex environmental factors explaining the mass mortalities of bivalve mollusks, feeding on neurotoxic dinoflagellates should now be considered as an environmental factor that potentially increases the severity of oyster mortality events. PMID:26784228

  11. Exposure to the Paralytic Shellfish Toxin Producer Alexandrium catenella Increases the Susceptibility of the Oyster Crassostrea gigas to Pathogenic Vibrios

    Directory of Open Access Journals (Sweden)

    Celina Abi-Khalil

    2016-01-01

    Full Text Available The multifactorial etiology of massive Crassostrea gigas summer mortalities results from complex interactions between oysters, opportunistic pathogens and environmental factors. In a field survey conducted in 2014 in the Mediterranean Thau Lagoon (France, we evidenced that the development of the toxic dinoflagellate Alexandrium catenella, which produces paralytic shellfish toxins (PSTs, was concomitant with the accumulation of PSTs in oyster flesh and the occurrence of C. gigas mortalities. In order to investigate the possible role of toxic algae in this complex disease, we experimentally infected C. gigas oyster juveniles with Vibrio tasmaniensis strain LGP32, a strain associated with oyster summer mortalities, after oysters were exposed to Alexandrium catenella. Exposure of oysters to A. catenella significantly increased the susceptibility of oysters to V. tasmaniensis LGP32. On the contrary, exposure to the non-toxic dinoflagellate Alexandrium tamarense or to the haptophyte Tisochrysis lutea used as a foraging alga did not increase susceptibility to V. tasmaniensis LGP32. This study shows for the first time that A. catenella increases the susceptibility of Crassostrea gigas to pathogenic vibrios. Therefore, in addition to complex environmental factors explaining the mass mortalities of bivalve mollusks, feeding on neurotoxic dinoflagellates should now be considered as an environmental factor that potentially increases the severity of oyster mortality events.

  12. Growth and survival of juvenile queen conch, Strombus gigas fed artificial diets containing varying levels of digestible protein and energy

    Science.gov (United States)

    Aquaculture methods for queen conch, Strombus gigas, have been established for several decades. However, there is a need to improve husbandry techniques for the growout of juveniles. The purpose of this study was to determine growth and survival of juvenile queen conch fed artificial diets with incr...

  13. The Giant Pacific Oyster (Crassostrea gigas) as a modern analogue for fossil ostreoids

    DEFF Research Database (Denmark)

    Ullmann, Clemens Vinzenz; Böhm, Florian; Rickaby, Rosalind E.M.;

    2013-01-01

    variability is possible. Here, two shell structures of modern Giant Pacific Oysters (Crassostrea gigas), the chalky substance and foliate layers, have been sampled for trace element distributions (Mg, Sr, Mn) and stable isotope variability (C, O, Ca). Oxygen isotopes exhibit a clear seasonal signature. Mean...

  14. Transcriptome response of the Pacific oyster (Crassostrea gigas) to infection with Vibrio tubiashii using cDNA AFLP differential display

    Science.gov (United States)

    We used qualitative complementary DNA-Amplified Fragment Length Polymorphism (cDNA-AFLP) differential display analysis and real-time, quantitative PCR (RT-qPCR) to identify genes in the Pacific oyster Crassostrea gigas whose transcription either changes in response to exposure to a pathogenic bacter...

  15. Angelica sinensis (Umbelliferae) with proven repellent properties against Aedes aegypti, the primary dengue fever vector in Thailand.

    Science.gov (United States)

    Champakaew, D; Junkum, A; Chaithong, U; Jitpakdi, A; Riyong, D; Sanghong, R; Intirach, J; Muangmoon, R; Chansang, A; Tuetun, B; Pitasawat, B

    2015-06-01

    Botanical resources with great diversity in medicinal and aromatic plants are a rich and reliable source for finding insect repellents of plant origin, which are widely popular among today's consumers. Although some herbal-based repellents have been proven comparable to or even better than synthetics, commercially available natural repellents generally tend to be expensive, with short-lived effectiveness. This critical flaw leads to ongoing research for new and effective repellents, which provide longer protection against vector and nuisance-biting insects, while remaining safe, user friendly, and reasonably priced. This study aimed to evaluate the repellent activity of plant-derived products against the primary dengue vector, Aedes aegypti, by following the human bait technique of World Health Organization guidelines. Preliminary laboratory screening tests for repellency of 33 plant species clearly demonstrated Angelica sinensis as the most effective repellent from each kind of extracted product, with its essential oil and ethanolic extract having median complete protection times of 7.0 h (6.0-7.5) and 2.5 h (2.0-2.5), respectively. Due to its low yield (0.02 %), pungent smell, and little cause of irritation, A. sinensis essential oil did not qualify as a candidate for further repellent assessment. However, subsequent extractions of A. sinensis with different organic solvents of increasing polarity provided four extractants with varying degrees of repellency against A. aegypti. The hexane extract of A. sinensis provided excellent repellency, with a median complete protection time of 7.5 h (6.5-8.5), which was longer than that of ethanol (2.5, 2.0-2.5 h), acetone (1.75, 0.5-2.5 h), and methanol extracts (0.5, 0-1.0 h). By being the most effective product, A. sinensis hexane extract gave significant protection comparable to that of its essential oil and the standard synthetic repellent, N,N-diethyl-3-methylbenzamide (DEET: 6.25, 5.0-6.5 h). Qualitative gas

  16. Study on Intervenient Effect of Angelica Sinensis Polysaccharide on Immunological Liver Injury and Its Mechanism in Mice

    Institute of Scientific and Technical Information of China (English)

    丁虹; 黄杰安

    2002-01-01

    Objective: To study the changes of expressions of nitric oxide synthase (NOS) of the constitutive type (cNOS) and inducible type (iNOS), the apoptosis related genes bax and bcl-2, as well as the tumor necrosis factor (TNF-α) in immunological liver injury (ILI) and to explore the preventive effects of Angelica sinensis polysaccharide (ASP) on ILI and its mechanism in mice.Methods: ILI model mice induced by intraperitoneal injection of lipo-polysaccharide (LPS) and BCG vaccine were treated with ASP of different doses (30mg/kg, 60mg/kg) by gastrogavage every day for 7 days. The serum alanine transaminase (ALT) and glutathione-S-transferase (GST) activities and NO content in the liver were detected; the expressions of cNOS, iNOS, bcl-2, bax were assessed with immuno-histochemical method, and the TNF-α mRNA expression in the liver was observed by reverse transcriptase-polymerase chain reaction (RT-PCR).Results: Compared with the normal mice , the NO production and ALT, GST levels were raised significantly in the model mice, the TNF-α mRNA expression was also raised significantly. But no obvious changes of cNOS was found. Small dose ASP (30mg/kg) could reduce NO production and ALT, GST levels in model mice by 19.5%, 23.7% and 40.0% respectively, decrease the expression of iNOS and bax by 48.3%, and 26.4%, and increase the expression of cNOS, bcl-2 by 66.9% and 337.3%, respectively, but it could not reduce the TNF-α mRNA expression in the liver. Large dose of ASP (60mg/kg) was not more effective than that of small dose.Conclusion: Changes of NO production and TNF-α mRNA may play an important role in ILI. The mechanism of ASP in intervening ILI may be through modulation on cNOS, iNOS, bax, bcl-2 expression to block the damage of BCG vaccine and LPS on hepatocytes.

  17. GigaPan Technology to Enhance In-Class and In-Field Learning in Community College Settings

    Science.gov (United States)

    Villalobos, J. I.; Bentley, C.

    2014-12-01

    Community college students account for over 40% of all undergraduates in the United States as well as the majority of minority and non-traditional students attending undergraduate courses. Implementing innovative, cost effective, and formative pedagogies to the diverse backgrounds of students that typically enroll at a community is often a challenge. Interactive pedagogies in geology pose a unique challenge considering that students gain the most long-term knowledge when topics covered in a course are exposed to them in outdoor settings where they are allowed to explore and make connections. The ability to expose students to real world examples is challenging to many community college faculty considering that that many; lack funds or means for transportation of students, do not have administrative support on such endeavors, teach evening or night classes, or have a high percentage of students who are physically limited or have obligations to work and family. A joint collaborative between El Paso Community College (EPCC) and Northern Virginia Community College (NOVA) has explored the usage of GigaPan technology to create multi-layered online material to minimize these issues faced by many community college faculty and students. The primary layer of the online material is GigaPans of local geological sites that highlight large-scale structures in the El Paso, Texas region that are commonly used in local field trips and lab book material. The second layer is of Macro-GigaPans of hand samples of key outcrops from the primarily GigaPans which facilitate student learning, exploration, and ability to make connections by exploring smaller scale features of the primary layer. A third layer of online material, GigaPans of thin sections of hand samples (from secondary layers), and curriculum based on the GigaPans was then created to assist students in evaluating proposed hypotheses on the primary layers' geological origin. GigaPan cirriculum was utilized in introductory

  18. Selection of anti-browning agents for Dosidicus gigas slice%秘鲁鱿鱼丝褐变抑制剂的筛选

    Institute of Scientific and Technical Information of China (English)

    林丹; 薛勇; 崔宏博; 王超; 薛长湖

    2012-01-01

    In order to select effective and safe anti-browning agents for Dosidicus gigas slice,glucose-Lys system and squid slice extraction-celite system were used as simulation systems to investigate those agents'anti-browning effects on Dosidicus gigas slice,including sodium sulfite,glutathione,cinnamic acid,citric acid,calcium lactate,ferulic,pentasodium tripolyphosphate,compound of ferulic and citric acid,and compound of cinnamic acid and citric acid.And the most effective agents were added in the Dosidicus gigas slice to test its anti-browning capacity.The result indicated that the compound of citric acid and ferulic was the most effective anti-browning agent compared with the others.The compound,in which citric acid at the concentration of 50mmol/L,was the most efficient anti-browning agent during storage at the temperature of 60℃ and the inhibiting browning rate could reach 23% after 4 days.However,its anti-browning capacity did not increase at the presence of ferulic.%建立了糖-赖氨酸与鱿鱼丝浸提液-硅藻土体系两种秘鲁鱿鱼丝褐变的模拟体系,对亚硫酸钠、谷胱甘肽、肉桂酸、柠檬酸、乳酸钙、阿魏酸和多聚磷酸钠这7种褐变抑制剂,以及阿魏酸、肉桂酸与柠檬酸的协同抗褐变作用进行探讨,并将选出的褐变抑制剂应用于秘鲁鱿鱼丝中进行验证。结果表明:在模拟体系中,柠檬酸和阿魏酸的混合物抗褐变作用较为突出。在阿魏酸与柠檬酸的混合褐变抑制剂中,50mmol/L的柠檬酸的添加量在60℃时有效抑制秘鲁鱿鱼丝中的褐变反应,其抗褐变率随反应时间的延长而增大,在反应的第4d可达到23%。此混合物中柠檬酸在抗褐变过程中起主导作用,且在本实验范围内,随着其添加量的增加抗褐变效果增强,而阿魏酸的添加量对总抗褐变效果无明显影响。

  19. The categorization and mutual modulation of expanded MyD88s in Crassostrea gigas.

    Science.gov (United States)

    Xin, Lusheng; Wang, Mengqiang; Zhang, Huan; Li, Meijia; Wang, Hao; Wang, Lingling; Song, Linsheng

    2016-07-01

    MyD88 serves as a critical cytosolic adaptor mediating activation of NF-κB in innate immunity. It has been found that there is a considerable expansion of MyD88 in Crassostrea gigas. In the present study, four typical MyD88 genes in Crassostrea gigas (CgMyD88-A to CgMyD88-D) were successfully cloned and their potential functions were investigated together with another two known ones (CgMyD88-T1 and CgMyD88-T2). Multiple alignments revealed that CgMyD88-B and CgMyD88-C remained the conserved DD and TIR domains, while there was a significant variation of E51Q in the DD of CgMyD88-A, and some variations in both DD and TIR domains of CgMyD88-D, respectively. Both truncated CgMyD88-T1 and CgMyD88-T2 lacked Box II in their only TIR domains. Expression pattern analysis showed that CgMyD88-B and CgMyD88-C genes possessed higher expression in normal tissues, compared with the other four. When oysters were under bacteria challenge, CgMyD88-B, CgMyD88-C, CgMyD88-T1 and CgMyD88-T2 were firstly induced, while CgMyD88-A and CgMyD88-D were suppressed. Dual luciferase reporter assays showed that CgMyD88-B and CgMyD88-C could promote the activation of NF-κB signaling pathway, while the other four CgMyD88 genes failed or even suppressed the activities of CgMyD88-B and CgMyD88-C on the activation of NF-κB signaling. It was deduced that after oysters were challenged by bacteria, CgMyD88-B and CgMyD88-C could rapidly and efficiently activate NF-κB signaling pathway to elicit anti-pathogen responses before suppressor CgMyD88 genes (CgMyD88-T1 and CgMyD88-T2) exceeding their expression level. These results suggested that there was mutual modulation of expanded CgMyD88 genes on activating NF-κB signaling pathway in oyster C. gigas. PMID:27074442

  20. Effects of twelve pesticides on larvae of oysters (Crassostrea gigas) and on two species of unicellular marine algae (Isochrysis galbana and Chaetoceros calcitrans)

    OpenAIRE

    His, Edouard; Seaman, Matthias

    1993-01-01

    The effects of seven herbicides, four insecticides and one molluscicide were tested at concentrations of up to 10 mg/l on larvae of oysters, Crassostrea gigas (9 days exposure), and on laboratory cultures of the algae Isochrysis galbana and Chaeloceros calcilrans (21 days exposure). Ali of the pesticides tested had significant toxic effects on at least one of the test organisms. The strongest effects were those of lindane and isoproturon on survival and growth of C.gigas larvae, and of iso...

  1. Modelling growth and reproduction of the Pacific oyster Crassostrea gigas: Advances in the oyster-DEB model through application to a coastal pond

    OpenAIRE

    Bourles, Yves; ALUNNO-BRUSCIA, Marianne; Pouvreau, Stephane; Tollu, Guillaume; Leguay, Didier; Arnaud, Christophe; Goulletquer, Philippe; Kooijman, S.

    2009-01-01

    A bio-energetic model, based on the DEB theory exists for the Pacific oyster Crassostrea gigas. Pouvreau et al. [Pouvreau, S., Bourles, Y., Lefebvre, S., Gangnery, A., Alunno-Bruscia, M., 2006. Application of a dynamic energy budget model to the Pacific oyster, C. gigas, reared under various environmental conditions. J. Sea Res. 56, 156–167.] successfully applied this model to oysters reared in three environments with no tide and low turbidity, using chlorophyll a concentration as food quanti...

  2. Spatial variability in growth and reproduction of the Pacific oyster Crassostrea gigas (Thunberg, 1793) along the west European coast

    OpenAIRE

    Cardoso, J.F.M.F.; D. Langlet; Loff, J.F.; A.R. Martins; Witte, J.IJ.; Santos, P.T.; H. W. van der Veer

    2007-01-01

    The Pacific oyster Crassostrea gigas was introduced in Europe for commercial purposes in the mid 1960s. It was initially thought that low winter temperatures would restrain this species' reproduction and settlement; however, its present distribution in areas where no introduction has taken place suggests that natural invasion and expansion has occurred. Along the European coast, wild populations of Pacific oysters are already found from northern Germany to southern Portugal. Whether C. gigas ...

  3. Biases in determining the diet of jumbo squid Dosidicus gigas (D' Orbigny 1835) (Cephalopoda: Ommastrephidae) off southern-central Chile (34°S-40°S)

    Science.gov (United States)

    Ibáñez, Christian M.; Arancibia, Hugo; Cubillos, Luis A.

    2008-12-01

    The diet of jumbo squid ( Dosidicus gigas) off southern-central Chile is described to examine potential biases in the determination of their main prey. Specimens were collected from catches using different fishing gear (jigging, trawl and purse-seine), from July 2003 to January 2004, and from December 2005 to October 2006. The stomach contents were analyzed in terms of frequency of occurrence, number, and weight of prey items and the diet composition was analyzed using Detrended Correspondence Analysis. In the industrial purse-seine fleet for jack mackerel ( Trachurus murphyi), the dominant prey of D. gigas was T. murphyi. In the industrial mid-trawl fishery for Patagonian grenadier ( Macruronus magellanicus), the dominant species in the diet of D. gigas was M. magellanicus. Similarly, Chilean hake ( Merluccius gayi) was the main prey in the diet of D. gigas obtained in the industrial trawl fishery for Chilean hake; and, in both artisanal fisheries (purse-seine for small pelagics and jigging), small pelagic fish and D. gigas were the main prey in the stomach contents of D. gigas. Cannibalism in D. gigas varied between different fleets and probably is related to stress behavior during fishing. The Detrended Correspondence Analysis ordination showed that the main prey in the diet of D. gigas is associated with the target species of the respective fishery. Consequently, biases are associated with fishing gear, leading to an overestimate in the occurrence of the target species in the diet. We recommend analyzing samples from jigging taken at the same time and place where the trawl and purse-seine fleets are operating to avoid this problem, and the application of new tools like stable isotope, heavy metal, and fatty acid signature analyses.

  4. The jumbo squid, Dosidicus gigas (Ommastrephidae), living in oxygen minimum zones II: Blood-oxygen binding

    Science.gov (United States)

    Seibel, Brad A.

    2013-10-01

    Dosidicus gigas is a large, metabolically active squid that migrates across a strong oxygen and temperature gradient in the Eastern Pacific. Here we analyze the oxygen-binding properties of the squid's respiratory protein (hemocyanin, Hc) that facilitate such activity. A high Hc-oxygen affinity, strong temperature dependence, and pronounced pH sensitivity (P50=0.009T2.03, pH 7.4; Bohr coefficient=ΔlogP50/ΔpH=-1.55+0.034T) of oxygen binding facilitate night-time foraging in the upper water column, and support suppressed oxygen demand in hypoxic waters at greater depths. Expanding hypoxia may act to alter the species habitable depth range. This analysis supports the contention that ocean acidification could limit oxygen carrying capacity in squids at warmer temperature leading to reduced activity levels or altered distribution.

  5. [Determination of proximal chemical composition of squid (dosidicus gigas) and development of gel products].

    Science.gov (United States)

    Abugoch, L; Guarda, A; Pérez, L M; Paredes, M P

    1999-06-01

    The good nutritional properties of meat from big squid (Dosidicus gigas) living on the Chilean coast, was determined through its proximal composition 70 cal/100 g fresh meat; 82.23 +/- 0.98% moisture; 15.32 +/- 0.93% protein; 1.31 +/- 0.12% ashes; 0.87 +/- 0.18% fat and 0.27% NNE (non-nitrogen extract). The big squid meat was used to develop a gel product which contained NaCl and TPP. It was necessary to use additives for gel preparation, such as carragenin or alginate or egg albumin, due to the lack of gelation properties of squid meat. Formulations containing egg albumin showed the highest gel force measured by penetration as compared to those that contained carragenin or alginate. PMID:10488395

  6. Gravity and light effects on the circadian clock of a desert beetle, Trigonoscelis gigas.

    Science.gov (United States)

    Hoban-Higgins, T M; Alpatov, A M; Wassmer, G T; Rietveld, W J; Fuller, C A

    2003-07-01

    Circadian function is affected by exposure to altered ambient force environments. Under non-earth gravitational fields, both basic features of circadian rhythms and the expression of the clock responsible for these rhythms are altered. We examined the activity rhythm of the tenebrionid beetle, Trigonoscelis gigas, in conditions of microgravity (microG; spaceflight), earth's gravity (1 G) and 2 G (centrifugation). Data were recorded under a light-dark cycle (LD), constant light (LL), and constant darkness (DD). Free-running period (tau) was significantly affected by both the gravitational field and ambient light intensity. In DD, tau was longer under 2 G than under either 1 G or microG. In addition, tauLL was significantly different from tauDD under microG and 1 G, but not under 2 G. PMID:12837319

  7. Copper, zinc and lead bioaccumulation in marine snail, Strombus gigas, from Guacanayabo Gulf, Cuba.

    Science.gov (United States)

    Díaz Rizo, O; Olivares Reumont, S; Viguri Fuente, J; Díaz Arado, O; López Pino, N; D'Alessandro Rodríguez, K; Arado López, J O; Gelen Rudnikas, A; Arencibia Carballo, G

    2010-09-01

    Levels of copper, zinc and lead were determined in sediments and edible muscle of marine snail Strombus gigas collected from Guacanayabo Gulf, Cuba. The concentration range of each metal in marine snail muscle on mg kg(-1) wet weight varied as follows: Cu = 6.4-32.6, Zn = 20.4-31.1 and Pb = 0.2-2.3; and in corresponding sediments (on mg kg(-1) dry weight) as: Cu = 157-186, Zn = 56-94 and Pb = 20-37. The average biota-sediment accumulation factors (BSAFs) obtained for studied metals are less than unity in all cases, indicating that only a little fraction of metal content in the sediments is bioavailable, independently of their possible enrichments in the sediments. The concentrations of copper and lead in some of the marine snails are above typical public health recommended limits. PMID:20676604

  8. An electron microscopy study of the microstructure and microarchitecture of the Strombus gigas shell

    Energy Technology Data Exchange (ETDEWEB)

    Rieke, P.C.; Laraia, V.J. (Pacific Northwest Lab., Richland, WA (USA)); Heuer, A.H. (Case Western Reserve Univ., Cleveland, OH (USA)); Aindow, M. (Ohio State Univ., Columbus, OH (USA))

    1989-11-01

    A scanning and transmission electron microscopy study is presented of the microstructure of the Strombus gigas shell. The hierarchical nature of this crossed-lamellar structure and the defect content of the mineral component are described. The mineral component consists of small single crystal grains of aragonite, the metastable orthorhombic polymorph of CaCO{sub 3}. The habit and morphology of the grains discussed here have not been determined previously. The observed habit and defect structure suggest that the organic matrix exerts a high degree of control over the crystal growth of the mineral phase and is responsible for the long range order in the microarhitecture. Electron beam heating of the mineral component leads to certain phase changes and these are discussed. 15 refs., 6 figs.

  9. Production of Generation-2 Mekong giant catfish (Pangasinodon gigas cultured with Spirulina sp.

    Directory of Open Access Journals (Sweden)

    Kriangsak Meng-umphan

    2008-11-01

    Full Text Available The purpose of this study is to evaluate the treatment of Spirulina-supplemented pellet feed to 5-year-old F1 groups of Mekong giant catfish (Pangasinodon gigas from the brood stock and intended for use as breeders. The effects on their growth and maturation when cultured in an earthen pond were observed. Results revealed that, compared to control, there was more gain in weight while the feed conversion ratio was lower. The number of red blood cells was also higher while that of white blood cells was lower, compared to control. Out of 18 treated fish (9 males and 9 females, 6 males and 2 females gave sperms and eggs while none from control group did. It was concluded that Spirulina supplemented in pellet feed can improve growth and maturation performance to the brood stock of Mekong giant catfish.

  10. Characterisation of the NA62 GigaTracker end of column readout ASIC

    CERN Document Server

    Noy, M; Perktold, L; Rinella, G A; Riedler, P; Morel, M; Kluge, A; Kaplon, J; Martin, E; Jarron, P

    2011-01-01

    The architecture and characterisation of the End Of Column demonstrator readout ASIC for the NA62 GigaTracker hybrid pixel detector is presented. This ASIC serves as a proof of principle for a pixel chip with 1800 pixels which must perform time stamping to better than 200 ps (RMS), provide 300 mu m pitch position information and operate with a dead-time of 1\\% or less for 800 MHz-1 GHz beam rate. The demonstrator ASIC comprises a full test column with 45 pixels alongside other test structures. The timewalk correction mechanism employed is measurement of the time-over-threshold, coupled with an off-detector look-up table. The time to digital converter is a delay locked loop with 32 contributing delay cells fed with a 320 MHz to yield a nominal bin size of 97 ps. Recently, P-in-N sensors have been bump-bonded to the ASIC and characterisation of these assemblies has begun.

  11. Characterization of the mantle transcriptome in bivalves: Pecten maximus, Mytilus edulis and Crassostrea gigas.

    Science.gov (United States)

    Yarra, Tejaswi; Gharbi, Karim; Blaxter, Mark; Peck, Lloyd S; Clark, Melody S

    2016-06-01

    The calcareous shells secreted by bivalve molluscs display diverse and species specific structural compositions, which indicates possible divergent biomineralization processes. Thus, studying multiple mollusc species will provide a more comprehensive understanding of shell formation. Here, the transcriptomes of the mantle tissues responsible for shell deposition were characterized in three commercially relevant bivalve species. Using high-throughput sequencing and bioinformatics tools, de novo transcriptome assemblies of mantle tissues were generated for the mussel Mytilus edulis, the oyster Crassostrea gigas and the scallop Pecten maximus. These transcriptomes were annotated, and contigs with similarity to proteins known to have shell formation roles in other species were identified. Comparison of the shell formation specific proteins in the three bivalves indicates the possibility of species specific shell proteins. PMID:27160853

  12. Temporal and maternal effects on reproductive ecology of the giant gartersnake (Thamnophis gigas)

    Science.gov (United States)

    Halstead, Brian J.; Wylie, Glenn D.; Casazza, Michael L.; Coates, Peter S.

    2011-01-01

    We used mixed-effects models to examine relationships of reproductive characteristics of the giant gartersnake (Thamnophis gigas) to improve population modeling and conservation planning for this species. Neonates from larger litters had lower mass, and mass of neonates also was affected by random variation among mothers. Length of mother did not affect relative mass of litters; however, our data suggest that longer mothers expended less reproductive effort per offspring than shorter mothers. We detected random variation in length of neonates among mothers, but these lengths were not related to length of mother or size of litter. Mean size of litter varied among years, but little evidence existed for a relationship between size of litter or mass of litter and length of mother. Sex ratios of neonates did not differ from 1:1.

  13. Moissanite anvil cell design for giga-pascal nuclear magnetic resonance

    International Nuclear Information System (INIS)

    A new design of a non-magnetic high-pressure anvil cell for nuclear magnetic resonance (NMR) experiments at Giga-Pascal pressures is presented, which uses a micro-coil inside the pressurized region for high-sensitivity NMR. The comparably small cell has a length of 22 mm and a diameter of 18 mm, so it can be used with most NMR magnets. The performance of the cell is demonstrated with external-force vs. internal-pressure experiments, and the cell is shown to perform well at pressures up to 23.5 GPa using 800 μm 6H-SiC large cone Boehler-type anvils. 1H, 23Na, 27Al, 69Ga, and 71Ga NMR test measurements are presented, which show a resolution of better than 4.5 ppm, and an almost maximum possible signal-to-noise ratio

  14. Evaluation of Giga-bit Ethernet Instrumentation for SalSA Electronics Readout (GEISER)

    CERN Document Server

    Varner, G S; Ridley, D; Zhu, C; Gorham, P; Varner, Gary S.; Murakami, Laine; Ridley, David; Zhu, Chaopin; Gorham, Peter

    2005-01-01

    An instrumentation prototype for acquiring high-speed transient data from an array of high bandwidth antennas is presented. Multi-kilometer cable runs complicate acquisition of such large bandwidth radio signals from an extensive antenna array. Solutions using analog fiber optic links are being explored, though are very expensive. We propose an inexpensive solution that allows for individual operation of each antenna element, operating at potentially high local self-trigger rates. Digitized data packets are transmitted to the surface via commercially available Giga-bit Ethernet hardware. Events are then reconstructed on a computer farm by sorting the received packets using standard networking gear, eliminating the need for custom, very high-speed trigger hardware. Such a system is completely scalable and leverages the hugh capital investment made by the telecommunications industry. Test results from a demonstration prototype are presented.

  15. Moissanite anvil cell design for giga-pascal nuclear magnetic resonance

    Science.gov (United States)

    Meier, Thomas; Herzig, Tobias; Haase, Jürgen

    2014-04-01

    A new design of a non-magnetic high-pressure anvil cell for nuclear magnetic resonance (NMR) experiments at Giga-Pascal pressures is presented, which uses a micro-coil inside the pressurized region for high-sensitivity NMR. The comparably small cell has a length of 22 mm and a diameter of 18 mm, so it can be used with most NMR magnets. The performance of the cell is demonstrated with external-force vs. internal-pressure experiments, and the cell is shown to perform well at pressures up to 23.5 GPa using 800 μm 6H-SiC large cone Boehler-type anvils. 1H, 23Na, 27Al, 69Ga, and 71Ga NMR test measurements are presented, which show a resolution of better than 4.5 ppm, and an almost maximum possible signal-to-noise ratio.

  16. A single bio-energetics growth and reproduction model for the oyster Crassostrea gigas in six Atlantic ecosystems

    Science.gov (United States)

    Alunno-Bruscia, Marianne; Bourlès, Yves; Maurer, Danièle; Robert, Stéphane; Mazurié, Joseph; Gangnery, Aline; Goulletquer, Philippe; Pouvreau, Stéphane

    2011-11-01

    Many studies based on bioenergetics growth models have investigated the effects of environmental factors on oyster ( Crassostrea gigas) growth and physiology. However, most of these models are site-specific and cannot be applied to other culture sites without the re-estimation of parameters or re-formulation of some processes. We aimed to develop a generic growth model suitable for application in contrasting environments, with a constant set of parameters. We tested the oyster-DEB model (Bourlès et al. 2009) for the stimulation of C. gigas growth in different cohorts (spats and adults) at major shellfish culture sites in France, in several years: Arcachon (1993-1994); Marennes-Oléron (2007); Quiberon (1999, 2000, 2001); Brest Harbour (2008); Mont-Saint-Michel Bay (2003); Baie-des-Veys (2002). These different ecosystems offer a wide range of values for the two forcing variables of the model: water temperature (range: 6-24 °C) and phytoplankton concentration (annual average: 110-700 × 10 3 cell L -1). The validation data (dry flesh mass of C. gigas) were obtained from various growth surveys carried out by IFREMER. The oyster-DEB model simulated the oyster growth dynamics of both spat and adult stages of C. gigas accurately over time at the various culture sites. The model captures: i) the active spring growth; ii) the timing and amplitude of spawning events; and iii) the lean periods ( i.e. loss of dry flesh mass) in autumn and winter. The half-saturation coefficient Xk is the only model parameter that varied between sites and years. This environment-specific coefficient reflects variability in the food of the oysters: quantitative and qualitative effects of the inorganic material and of the phytoplankton species on the feeding response of C. gigas. With a single set of parameters (other than for Xk), this is thus the first bio-energetic growth model for C. gigas robust enough and of a sufficiently generic nature for the accurate simulation of oyster growth in

  17. Evolution and functional analysis of the Pif97 gene of the Pacific oyster Crassostrea gigas

    Directory of Open Access Journals (Sweden)

    Xiaotong WANG, Xiaorui SONG, Tong WANG, Qihui ZHU, Guoying MIAO, Yuanxin CHEN, Xiaodong FANG, Huayong QUE, Li LI, Guofan ZHANG

    2013-02-01

    Full Text Available Mollusc shell matrix proteins (SMPs are important functional components embedded in the shell and play a role in shell formation. A SMP (Pif177 was identified previously from the nacreous layer of the Japanese pearl oyster Pinctada fucata, and its cleavage products (named pfPif97 and pfPif80 proteins were found to bind to the chitin framework and induce aragonite crystal formation and orient the c axis. In this study, a homologue of pfPif177 was cloned from the mantle of the Pacific oyster Crassostrea gigas, containing the homologue of pfPif97 only and not pfPif80. This finding hints at the large divergence in gene structure between the two species. This homologue (cgPif97 shares characteristics with pfPif97, and suggests that the biological functions of these two proteins may be similar. The expression pattern of cgPif97 in different tissues and development stages indicates that it may play an important role in shell formation of the adult oyster. The morphology of the inner shell surface was affected by injected siRNA of cgPif97 and the calcite laths of the shell became thinner and narrower when the siRNA dose increased, suggesting that the cgPif97 gene plays an important role in calcite shell formation in C. gigas. In conclusion, we found evidence that the Pif177 gene evolved very fast but still retains a similar function among species [Current Zoology 59 (1: 109–115, 2013].

  18. Giga-Pixel Lensfree Holographic Microscopy and Tomography Using Color Image Sensors

    Science.gov (United States)

    Coskun, Ahmet F.; Ozcan, Aydogan

    2012-01-01

    We report Giga-pixel lensfree holographic microscopy and tomography using color sensor-arrays such as CMOS imagers that exhibit Bayer color filter patterns. Without physically removing these color filters coated on the sensor chip, we synthesize pixel super-resolved lensfree holograms, which are then reconstructed to achieve ∼350 nm lateral resolution, corresponding to a numerical aperture of ∼0.8, across a field-of-view of ∼20.5 mm2. This constitutes a digital image with ∼0.7 Billion effective pixels in both amplitude and phase channels (i.e., ∼1.4 Giga-pixels total). Furthermore, by changing the illumination angle (e.g., ±50°) and scanning a partially-coherent light source across two orthogonal axes, super-resolved images of the same specimen from different viewing angles are created, which are then digitally combined to synthesize tomographic images of the object. Using this dual-axis lensfree tomographic imager running on a color sensor-chip, we achieve a 3D spatial resolution of ∼0.35 µm×0.35 µm×∼2 µm, in x, y and z, respectively, creating an effective voxel size of ∼0.03 µm3 across a sample volume of ∼5 mm3, which is equivalent to >150 Billion voxels. We demonstrate the proof-of-concept of this lensfree optical tomographic microscopy platform on a color CMOS image sensor by creating tomograms of micro-particles as well as a wild-type C. elegans nematode. PMID:22984606

  19. Giga-pixel lensfree holographic microscopy and tomography using color image sensors.

    Directory of Open Access Journals (Sweden)

    Serhan O Isikman

    Full Text Available We report Giga-pixel lensfree holographic microscopy and tomography using color sensor-arrays such as CMOS imagers that exhibit Bayer color filter patterns. Without physically removing these color filters coated on the sensor chip, we synthesize pixel super-resolved lensfree holograms, which are then reconstructed to achieve ~350 nm lateral resolution, corresponding to a numerical aperture of ~0.8, across a field-of-view of ~20.5 mm(2. This constitutes a digital image with ~0.7 Billion effective pixels in both amplitude and phase channels (i.e., ~1.4 Giga-pixels total. Furthermore, by changing the illumination angle (e.g., ± 50° and scanning a partially-coherent light source across two orthogonal axes, super-resolved images of the same specimen from different viewing angles are created, which are then digitally combined to synthesize tomographic images of the object. Using this dual-axis lensfree tomographic imager running on a color sensor-chip, we achieve a 3D spatial resolution of ~0.35 µm × 0.35 µm × ~2 µm, in x, y and z, respectively, creating an effective voxel size of ~0.03 µm(3 across a sample volume of ~5 mm(3, which is equivalent to >150 Billion voxels. We demonstrate the proof-of-concept of this lensfree optical tomographic microscopy platform on a color CMOS image sensor by creating tomograms of micro-particles as well as a wild-type C. elegans nematode.

  20. Giga-pixel lensfree holographic microscopy and tomography using color image sensors.

    Science.gov (United States)

    Isikman, Serhan O; Greenbaum, Alon; Luo, Wei; Coskun, Ahmet F; Ozcan, Aydogan

    2012-01-01

    We report Giga-pixel lensfree holographic microscopy and tomography using color sensor-arrays such as CMOS imagers that exhibit Bayer color filter patterns. Without physically removing these color filters coated on the sensor chip, we synthesize pixel super-resolved lensfree holograms, which are then reconstructed to achieve ~350 nm lateral resolution, corresponding to a numerical aperture of ~0.8, across a field-of-view of ~20.5 mm(2). This constitutes a digital image with ~0.7 Billion effective pixels in both amplitude and phase channels (i.e., ~1.4 Giga-pixels total). Furthermore, by changing the illumination angle (e.g., ± 50°) and scanning a partially-coherent light source across two orthogonal axes, super-resolved images of the same specimen from different viewing angles are created, which are then digitally combined to synthesize tomographic images of the object. Using this dual-axis lensfree tomographic imager running on a color sensor-chip, we achieve a 3D spatial resolution of ~0.35 µm × 0.35 µm × ~2 µm, in x, y and z, respectively, creating an effective voxel size of ~0.03 µm(3) across a sample volume of ~5 mm(3), which is equivalent to >150 Billion voxels. We demonstrate the proof-of-concept of this lensfree optical tomographic microscopy platform on a color CMOS image sensor by creating tomograms of micro-particles as well as a wild-type C. elegans nematode. PMID:22984606

  1. Evolution and functional analysis of the Pif97 gene of the Pacific oyster Crassostrea gigas

    Institute of Scientific and Technical Information of China (English)

    Xiaotong WANG; Xiaorui SONG; Tong WANG; Qihui ZHU; Guoying MIAO; Yuanxin CHEN; Xiaodong FANG

    2013-01-01

    Mollusc shell matrix proteins (SMPs) are important functional components embedded in the shell and play a role in shell formation.A SMP (Pif177) was identified previously from the nacreous layer of the Japanese pearl oyster Pinctada fucata,and its cleavage products (named pfPif97 and pfPif80 proteins) were found to bind to the chitin framework and induce aragonite crystal formation and orient the c axis.In this study,a homologue ofpfPifl77 was cloned from the mantle of the Pacific oyster Crassostrea gigas,containing the homologue of pfPif97 only and not pfPif80.This finding hints at the large divergence in gene structure between the two species.This homologue (cgPif97) shares characteristics with pfPif97,and suggests that the biological functions of these two proteins may be similar.The expression pattern of cgPif97 in different tissues and development stages indicates that it may play an important role in shell formation of the adult oyster.The morphology of the inner shell surface was affected by injected siRNA of cgPif97 and the calcite laths of the shell became thinner and narrower when the siRNA dose increased,suggesting that the cgPif97 gene plays an important role in calcite shell formation in C.gigas.In conclusion,we found evidence that the Pif177 gene evolved very fast but still retains a similar function among species [Current Zoology 59 (1):109-115,2013].

  2. Structural Characterization of a Polysaccharide From the Roots of Angelica Sinensis (Oliv) Diels by Gas Chromatography-Mass Spectrometry%气相色谱-质谱法研究当归多糖的糖链联接方式

    Institute of Scientific and Technical Information of China (English)

    徐桂云; 陈汝贤

    2004-01-01

    X-C-3- Ⅱ, a polysaccharide having immunologic adjuvanticity was extracted and purified from the roots of Angelica sinensis (Oliv) Diels. Its linkage was elucidated by selective hydrolysis and GC-MS analysis of its derivatives, as well as its 1H and 13C NMR spectra. This polysaccharide was composed of arabinose, galactose, glucose and fructose with a molar ratio of 1 : 1 : 4 : 9, and it had a highly branched structure with a fructofuranosyl backbone. The sequence of the repeating unit of X-C-3- Ⅱ was deduced. To our best knowledge, this is the first report of the fructose residue in polysaccharides from the rootsof Angelica sinensis (Oliv) Diels.

  3. 当归愈伤组织褐化前后生理生化的研究%Physiological and biochemical characteristics of Angelica sinensis (Oliv) Diels callus tissue before and after browning

    Institute of Scientific and Technical Information of China (English)

    雒晓芳; 董开忠; 牛锋; 陈丽华; 王冬梅

    2009-01-01

    The physiological and biochemical characteristics on Angelica sinensis(Oliv) Diels callus tissue before and after browning were studied according to the determination of nitratase activity, soluble protein content, reducing sugar content and malondialdehyde content.The results showed that browning had significant effect on the activity of of Angelica sinensis (Oliv) Diels callus tissue.%通过测定硝酸还原酶活力、可溶性蛋白质含量、还原糖含量以及丙二醛的含量来研究当归愈伤组织褐化前、后生理生化指标的变化;结果表明褐化对当归愈伤组织的活性影响显著.

  4. 宮崎県産および韓国産のアシタバ (Angelica keiskei Koidzumi)葉の成分の分離および分析

    OpenAIRE

    菅本, 和寛; 松下, 洋一; 松井, 隆尚; 黒木, 千亜紀; 朴, 鍾吉

    2008-01-01

    Five flavonoids, Luteolin (1), Cynaroside (2), Isoquercitrin (3), Xanthoangelol (5) and 4-Hydroxyderricin (6) were isolated from the methanol extract of leaves of Ashitaba (Angelica keiskei Koidzumi) in Miyazaki. On the other hand, 1, 2 and Hyperoside (4) were isolated from the methanol extract of leaves of Ashitaba in Korea. The methanol extracts of Ashitaba leaves growing in Miyazaki and Korea were analyzed by high performance liquid chromatography (HPLC).

  5. Boccardia sp. (Polychaete: Spionidae presence in Crassostrea gigas [Thunberg, 1873] oysters reared in the mid coast of the Mexican Pacific

    Directory of Open Access Journals (Sweden)

    M. C. Gallo-García

    2005-01-01

    Full Text Available Desde 1997 se han realizado varios estudios acerca del cultivo del ostión del Pacífico, Crassostrea gigas, en la Laguna de Barra de Navidad (Jalisco, México. La presencia de ampollas de lodo en las valvas internas del ostión causadas por gusanos barrenadores de la concha, ha representado uno de los principales problemas en el cultivo. Boccardia sp. (Polychaete: Spionidae fue identificado de una muestra de 60 ostiones estudiados. A pesar del efecto de este gusano en el cultivo de ostión, se carece de información sobre su impacto en la industria ostrícola mexicana. El presente trabajo representa un primer reporte sobre la ocurrencia de este poliqueto en los cultivos de C. gigas que se localizan en la costa media del Pacífico mexicano

  6. Metabolic physiology of the Humboldt squid, Dosidicus gigas: Implications for vertical migration in a pronounced oxygen minimum zone

    Science.gov (United States)

    Rosa, Rui; Seibel, Brad A.

    2010-07-01

    The Humboldt (or jumbo) squid, Dosidicus gigas, is an active predator endemic to the Eastern Pacific that undergoes diel vertical migrations into a pronounced oxygen minimum layer (OML). Here, we investigate the physiological mechanisms that facilitate these migrations and assess the associated costs and benefits. Exposure to hypoxic conditions equivalent to those found in the OML (∼10 μM O 2 at 10 °C) led to a significant reduction in the squid’s routine metabolic rate (RMR), from 8.9 to 1.6 μmol O 2 g -1 h -1 ( p gigas may repay any oxygen debt accumulated during the daytime. The dive to deeper water may minimize exposure to stressful surface temperatures when most prey have migrated to depth during the daytime. The physiological and ecological strategies demonstrated here may have facilitated the recent range expansion of this species into northern waters where expanding hypoxic zones prohibit competing top predators.

  7. [Distribution, abundance, density and morphometry of Strombus gigas (Mesogasteropoda: Strombidae) in Alacranes reef, Yucatán, México].

    Science.gov (United States)

    Pérez Pérez, M; Aldana Aranda, D

    2000-12-01

    A population of the conch Strombus gigas was sampled in 109 transects (100 x 10 m each) for an area of 109000 m2 (eight surveys in 1998 and six in 1999) in Yucatan, Mexico; S. gigas was the most abundant conch species (97% of individuals) and ocurred at depths of 0.5-18 m. Mean density was 0.0084 individuals/m2 (Standard deviation SD=0.0138, n=1910). Maximum density (0.015 individuals/m2) was at 0.5-2 m and minimal (0.001 individuals/m2) at 16-18 m. Shell length was 120-290 mm (mena=211.6, SD=26, n=1136). Shell lip thickness, measured only in adults, was 1-28 mm (mean=8.7, SD=7.5, n=1136). PMID:15266792

  8. Transport of Pirarucu Arapaima gigas juveniles in plastic bag Transporte de juvenis de pirarucu Arapaima gigas em sacos plásticos

    Directory of Open Access Journals (Sweden)

    Levy de Carvalho Gomes

    2003-12-01

    Full Text Available This study examined the stress response of pirarucu juveniles in a closed system transport. Pirarucu (Arapaima gigas is a native Amazonian fish species from the Osteoglossidae family and an obligated air breather. A short duration transport trial (6h was undertaken comparing closed polyethylene bags filled with atmospheric air (Air group and bags filled with pure oxygen (Oxi group. Dissolved oxygen was the only water parameter that presented a difference between fish groups, and was saturated in the oxi group as expected. There was no mortality in either group after transport. Fish feeding was observed 36 h after transport for all fish, and normal feeding consumption was observed at 72 h. In both groups physiological responses were similar. Cortisol did not show any significant alteration during the sampled period. Unlike most fish species, cortisol values were unaltered in both groups during sampling, while glucose presented a significant change up to 12 h after transport. The results showed that pirarucu transport in plastic bags could be made with either atmospheric air or pure oxygen, since physiological response to stress, water quality and feeding behavior after 36 h were similar in both groups.Este estudo examinou as respostas de estresse de juvenis de pirarucu transportados em sistema fechado. Pirarucu (Arapaima gigas é um peixe nativo da bacia Amazônica, da família Osteoglossidae que possui respiração aérea obrigatória. Foi realizado um transporte de curta duração (6 h em sacos de polietileno inflados com ar atmosférico (grupo ar ou com oxigênio puro (grupo oxi. O oxigênio dissolvido foi o único parâmetro de qualidade da água que apresentou diferença estatística entre os grupos, e como esperado, o oxigênio estava supersaturado para o grupo oxi. Não houve mortalidade após o transporte em ambos os grupos. Os peixes se alimentaram 36 h após o transporte e apresentaram um consumo de ração habitual após 72 h. As

  9. Rapid Authentication of the Herbal Medicine Plant Species Aralia continentalis Kitag. and Angelica biserrata C.Q. Yuan and R.H. Shan Using ITS2 Sequences and Multiplex-SCAR Markers.

    Science.gov (United States)

    Kim, Wook Jin; Moon, Byeong Cheol; Yang, Sungyu; Han, Kyeong Suk; Choi, Goya; Lee, A Yeong

    2016-01-01

    Accurate identification of the plant species that are present in herbal medicines is important for quality control. Although the dried roots of Aralia continentalis (Araliae Continentalis Radix) and Angelica biserrata (Angelicae Pubescentis Radix) are used in the same traditional medicine, namely Dok-Hwal in Korean and Du-Huo in Chinese, the medicines are described differently in the national pharmacopeia. Further confusion arises from the distribution of dried Levisticum officinale and Heracleum moellendorffii roots as the same medicine. Medicinal ingredients from all four plants are morphologically similar, and discrimination is difficult using conventional methods. Molecular identification methods offer rapidity and accuracy. The internal transcribed spacer 2 (ITS2) region of the nuclear ribosomal RNA gene (rDNA) was sequenced in all four plant species, and the sequences were used to design species-specific primers. Primers for each species were then combined to allow sample analysis in a single PCR reaction. Commercial herbal medicine samples were obtained from Korea and China and analyzed using the multiplex assay. The assay successfully identified authentic medicines and also identified inauthentic or adulterated samples. The multiplex assay will be a useful tool for identification of authentic Araliae Continentalis Radix and/or Angelicae Pubescentis Radix preparations in Korea and China. PMID:26938512

  10. Rapid Authentication of the Herbal Medicine Plant Species Aralia continentalis Kitag. and Angelica biserrata C.Q. Yuan and R.H. Shan Using ITS2 Sequences and Multiplex-SCAR Markers

    Directory of Open Access Journals (Sweden)

    Wook Jin Kim

    2016-02-01

    Full Text Available Accurate identification of the plant species that are present in herbal medicines is important for quality control. Although the dried roots of Aralia continentalis (Araliae Continentalis Radix and Angelica biserrata (Angelicae Pubescentis Radix are used in the same traditional medicine, namely Dok-Hwal in Korean and Du-Huo in Chinese, the medicines are described differently in the national pharmacopeia. Further confusion arises from the distribution of dried Levisticum officinale and Heracleum moellendorffii roots as the same medicine. Medicinal ingredients from all four plants are morphologically similar, and discrimination is difficult using conventional methods. Molecular identification methods offer rapidity and accuracy. The internal transcribed spacer 2 (ITS2 region of the nuclear ribosomal RNA gene (rDNA was sequenced in all four plant species, and the sequences were used to design species-specific primers. Primers for each species were then combined to allow sample analysis in a single PCR reaction. Commercial herbal medicine samples were obtained from Korea and China and analyzed using the multiplex assay. The assay successfully identified authentic medicines and also identified inauthentic or adulterated samples. The multiplex assay will be a useful tool for identification of authentic Araliae Continentalis Radix and/or Angelicae Pubescentis Radix preparations in Korea and China.

  11. 亳白芷挥发油成分的气相色谱-质谱联用分析%GC - MS Study on the Essential Oil of Angelica dahurica

    Institute of Scientific and Technical Information of China (English)

    马逾英; 王娜; 张利; 车早红

    2009-01-01

    Objective To explore the chemical components of the essential oil of Angelica dahurica from Bozhou. Methods The essential oil from Angelica dahurica was separated and analysed by GC-MS, and compared with Angelica dahurica from Sichuan. Results 37 compounds were separated and identified. Conclusion Terpenes and their oxoderivatives are the major chemical constituents in the essential oil,including alkenes,alcohol ,acid,cyclododecane and ester.%目的 研究亳白芷的挥发油化学成分.方法 采用气相色谱-质谱联用技术分析亳白芷药材挥发油种类和含量,并与同样方法 处理过的川白芷进行比较.结果 从亳白芷中鉴定出37种成分.结论 亳白芷含有大量的碳烯、醇、酸、酯类物质.

  12. Characterization of a defensin from the oyster Crassostrea gigas - Recombinant production, folding, solution structure, antimicrobial activities, and gene expression

    OpenAIRE

    Gueguen, Yannick; Herpin, Amaury; Aumelas, André; Garnier, Julien; Fievet, Julie; Escoubas, Jean-Michel; Bulet, Philippe; Gonzalez, Marcelo; Lelong, Christophe; Favrel, Pascal; Bachere, Evelyne

    2006-01-01

    In invertebrates, defensins were found in arthropods and in the mussels. Here, we report for the first time the identification and characterization of a defensin (Cg-Def) from an oyster. Cg-def mRNA was isolated from Crassostrea gigas mantle using an expressed sequence tag approach. To gain insight into potential roles of Cg-Def in oyster immunity, we produced the recombinant peptide in Escherichia coli, characterized its antimicrobial activities, determined its solution structure by NMR spec...

  13. Genetic variability and selective breeding for traits of aquacultural interest in the Pacific oyster (Crassostrea gigas) (slides)

    OpenAIRE

    Boudry, Pierre; Degremont, Lionel; Taris, Nicolas; Mccombie, Helen; Haffray, Pierrick; Ernande, Bruno

    2004-01-01

    To date, the most significant genetic improvement for the production of Pacific oyster (Crassostrea gigas) has been obtained through the breeding of triploids, especially since the development of tetraploids. Quantitative genetics studies suggest that significant gains, for disease resistance or for other traits of aquacultural interest, could be obtained in diploids using this approach. However, the limited extent of hatchery-propagation (versus natural recruitment) and/or various technical ...

  14. Association among growth, food consumption-related traits and amylase gene polymorphism in the Pacific oyster Crassostrea gigas

    OpenAIRE

    Huvet, Arnaud; Jeffroy, F; Fabioux, C; Daniel, Jean-Yves; Quillien, Virgile; Van Wormhoudt, A; Moal, Jeanne; Samain, Jean-francois; Boudry, Pierre; Pouvreau, Stephane

    2008-01-01

    To examine further a previously reported association between amylase gene polymorphism and growth in the Pacific oyster Crassostrea gigas, ecophysiological parameters and biochemical and molecular expression levels of alpha-amylase were studied in Pacific oysters of different amylase genotypes. Genotypes that previously displayed significantly different growth were found to be significantly different for ingestion and absorption efficiency. These estimated parameters, used in a dynamic energy...

  15. Trophic relationships between the jumbo squid (Dosidicus gigas) and the lightfish (Vinciguerria lucetia) in the Humboldt Current System off Peru

    OpenAIRE

    Rosas-Luis, Rigoberto; Tafur-Jimenez, Ricardo; Alegre-Norza, Ana R.; Castillo-Valderrama, Pedro R.; Cornejo-Urbina, Rodolfo M.; Salinas-Zavala, Cesar A.; Sánchez, Pilar

    2011-01-01

    [EN] Acoustic surveys for assessing the biomass and distribution of the jumbo squid (Dosidicus gigas) and the lightfish (Vinciguerria lucetia) were carried out in the Humboldt Current System of Peru in 2007 and 2008. At the same time, 937 jumbo squid were caught and their stomach contents analyzed. The diet of the jumbo squid was dominated by mesopelagic fish. The first component of their fish diet was V. lucetia and the second component was the myctophid fish Diogenichthys laternatus. Acoust...

  16. Etude des voies metaboliques des sucres chez l'huitre creuse crassostrea gigas. Implication dans les mortalites estivales.

    OpenAIRE

    Bacca, Helene

    2007-01-01

    Glycogen, the main form of glucose reserve in bivalves, is known to play a key energetic role in the Pacific oyster (Crassostrea gigas) annual reproduction cycle. The aim of this work was to study the pathways of glycogen synthesis and utilization in order to explain the relationships between energy, reproduction and oyster summer mortality events. We first characterized full length mRNA sequences of Glycogen synthase (Cg-GYS) and Glycogen phosphorylase (Cg-GPH). Biochemical determination of ...

  17. Gametogenesis in the Pacific Oyster Crassostrea gigas: A Microarrays-Based Analysis Identifies Sex and Stage Specific Genes

    OpenAIRE

    Dheilly, Nolwenn M; Lelong, Christophe; Huvet, Arnaud; Kellner, Kristell; Dubos, Marie-pierre; Riviere, Guillaume; Boudry, Pierre; Favrel, Pascal

    2012-01-01

    Background: The Pacific oyster Crassostrea gigas (Mollusca, Lophotrochozoa) is an alternative and irregular protandrous hermaphrodite: most individuals mature first as males and then change sex several times. Little is known about genetic and phenotypic basis of sex differentiation in oysters, and little more about the molecular pathways regulating reproduction. We have recently developed and validated a microarray containing 31,918 oligomers (Dheilly et al., 2011) representing the oyster tra...

  18. A single bio-energetics growth and reproduction model for the oyster Crassostrea gigas in six Atlantic ecosystems

    OpenAIRE

    ALUNNO-BRUSCIA, Marianne; Bourles, Yves; Maurer, Daniele; Robert, Stephane; Mazurie, Joseph; Gangnery, Aline; Goulletquer, Philippe; Pouvreau, Stephane

    2011-01-01

    Many studies based on bioenergetics growth models have investigated the effects of environmental factors on oyster (Crassostrea gigas) growth and physiology. However, most of these models are site-specific and cannot be applied to other culture sites without the re-estimation of parameters or re-formulation of some processes. We aimed to develop a generic growth model suitable for application in contrasting environments, with a constant set of parameters. We tested the oyster-DEB model (Bourl...

  19. A DEB model to predict accumulation and detoxification of paralytic shellfish toxins by the Japanese Oyster (Crassostrea gigas)

    OpenAIRE

    Pousse, Emilien; Jean, Frédéric; ALUNNO-BRUSCIA, Marianne; Flye Sainte Marie, Jonathan

    2015-01-01

    France being the largest consumer of oysters in Europe, oyster farming is deeply rooted in French heritage. The Japanese oyster (Crassostrea gigas) is the oyster species the most exploited in France, and in the world. Due to filter-feeding, these bivalves are sensitive to toxic algal blooms. Although not always lethal, toxic algae can affect oyster physiology and make it unfit for human consumption. Phytoplankton toxins can be classified in several groups: amnesic, neurotoxic, diarrhetic and ...

  20. Pacific oyster (Crassostrea gigas) hemocyte are not affected by a mixture of pesticides in short-term in vitro assays

    OpenAIRE

    Moreau, Pierrick; Burgeot, Thierry; Renault, Tristan

    2014-01-01

    Pesticides are frequently detected in estuaries among the pollutants found in estuarine and coastal areas and may have major ecological consequences. They could endanger organism growth, reproduction or survival. In the context of high mortality outbreaks affecting Pacific oysters, Crassostrea gigas, in France since 2008, it appears of importance to determine the putative effects of pesticides on oyster susceptibility to infectious agents. Massive mortality outbreaks reported in this species,...

  1. Application of a dynamic energy budget model to the Pacific oyster, Crassostrea gigas, reared under various environmental conditions

    OpenAIRE

    Pouvreau, Stephane; Bourles, Yves; LEFEBVRE, Sebastien; Gangnery, Aline; ALUNNO-BRUSCIA, Marianne

    2006-01-01

    The Dynamic Energy Budget (DEB) model (Kooijman, S.A.L.M., 1986. Energy budgets can explain body size relations. J. Theor. Biol. 121, 269¿282; Kooijman, S.A.L.M., 2000. Dynamic Energy and Mass Budgets in Biological Systems. Cambridge University Press, Cambridge, 424 pp.) has been adapted to describe the dynamics of growth and reproduction of the Pacific oyster (Crassostrea gigas) reared in different areas under conditions ranging from controlled to natural. The values of the model parameters ...

  2. Gametogenesis, reproductive investment, and spawning behavior of the Pacific giant oyster Crassostrea gigas: evidence of an environment-dependent strategy

    OpenAIRE

    Enriquez-diaz, M.; Pouvreau, Stephane; Chavez-villalba, J.; Le Pennec, M

    2009-01-01

    The progress of gametogenesis was studied in oysters Crassostrea gigas having the same origin (Tremblade), but cultured during 1 year in two distinctive French marine areas, the Baie des Veys and Marennes-Ol,ron. We assessed seasonal changes in the reproduction cycle on the basis of stereological techniques to estimate reproductive investment and measurement of gonad evolution area by quantitative histology. From a qualitative point of view, both oyster groups presented typical reproductive s...

  3. Genomic Analysis of the Pacific Oyster (Crassostrea gigas) Reveals Possible Conservation of Vertebrate Sex Determination in a Mollusc

    OpenAIRE

    Zhang, Na; Xu, Fei; Guo, Ximing

    2014-01-01

    Despite the prevalence of sex in animal kingdom, we have only limited understanding of how sex is determined and evolved in many taxa. The mollusc Pacific oyster Crassostrea gigas exhibits complex modes of sexual reproduction that consists of protandric dioecy, sex change, and occasional hermaphroditism. This complex system is controlled by both environmental and genetic factors through unknown molecular mechanisms. In this study, we investigated genes related to sex-determining pathways in C...

  4. Nutrition and reproduction are key parameters in the interaction process leading to Crassostrea gigas oyster summer mortality in France

    OpenAIRE

    Samain, Jean-francois; Degremont, Lionel; Soletchnik, Patrick; Ropert, Michel; Bedier, Edouard; Mazurie, Joseph; Martin, Jean-Louis; Moal, Jeanne; Mathieu, Michel; Pouvreau, Stephane; Lambert, Christophe; Escoubas, Jean-Michel; Nicolas, Jean-Louis; Le Roux, Frédérique; Renault, Tristan

    2006-01-01

    Complex interactions between oyster, environment and pathogens were observed during the MOREST (2001-2005) project on summer mortality events of Crassostrea gigas oysters in France. The talk will show how nutrition level increasing reproductive intensity generates a risk for pathogen infection under synergistic effect of temperature and stress. Moreover, a genetic component is associated to specific reproductive performances and spawning behaviour. To better understand origin of such resistan...

  5. Sex-Specific Regulation of AMP-Activated Protein Kinase (AMPK) in the Pacific Oyster Crassostrea gigas

    OpenAIRE

    Guevelou, Eric; Huvet, Arnaud; Galindo-sanchez, Clara E.; Milan, Massimo; Quillien, Virgile; Daniel, Jean-yves; Quere, Claudie; Boudry, Pierre; Corporeau, Charlotte

    2013-01-01

    The hermaphrodite Pacific oyster Crassostrea gigas displays a high energy allocation to reproduction. We studied the expression of AMP-activated protein kinase (AMPK) during gametogenesis in the gonad and characterized the mRNA sequences of the AMPK subunits: the AMPK alpha mRNA sequence was previously characterized; we identified AMPK beta, AMPK gamma, and mRNAs of putative AMPK-related targets following bioinformatics mining on existing genomic resources. We analyzed the mRNA expression of ...

  6. Stable isotopes on jumbo squid (Dosidicus gigas) beaks to esitmate its trophic positon: comparison between stomach contents and stable isotopes

    OpenAIRE

    Ruiz Cooley, R.I.; Markaida, U.; Gendron, Diane; Aguíñiga García, Sergio

    2006-01-01

    Stomach contents and carbon (C) and nitrogen (N) stable isotope analysis were used to evaluate trophic relationships of jumbo squid, Dosidicus gigas. Buccal masses, beaks and stomach contents of large and medium maturing-sized jumbo squid and muscle from its main prey, the myctophid Benthosema panamense, were collected in the Gulf of California, Mexico during 1996, 1997 and 1999. Both the quantified C and N-isotope ratios in muscle, and stomach content analysis revealed that larger-sized matu...

  7. The Cephalopod Dosidicus gigas of the Humboldt Current System Under the Impact of Fishery and Environmental Variability

    OpenAIRE

    Keyl, Friedemann

    2009-01-01

    Marine organisms are influenced by environmental variability and fishery and cephalopods are especially plastic in their response to exogenous factors. Underlying mechanisms of interactions are often unclear and complex. The ommastrephid jumbo squid (Dosidicus gigas) is an important component in the ecosystems of the Eastern Pacific Ocean and like other cephalopods rapidly changes abundances of its populations and their size structure. Results of the present work show that the morphological a...

  8. Behavior ecology of the Humboldt squid, Dosidicus gigas: insights from an animal-borne video and data logging system

    OpenAIRE

    Bell, Lauren Elizabeth

    2011-01-01

    Dosidicus gigas is a large pelagic cephalopod of the eastern Pacific that has recently undergone an unexpected, significant range expansion up the coast of North America. The impact that such a range expansion is expected to have on local fisheries and marine ecosystems has motivated a thorough study of this top predator, a squid whose lifestyle has been quite mysterious until recently. Unfortunately, Dosidicus spends daylight hours at depths prohibitive to making observations without signifi...

  9. Impact of Two Commercial In Vivo Transport Methods on Physiological Condition of the Japanese Oyster (Crassostrea gigas)

    OpenAIRE

    Edgar Iván Jiménez-Ruiz; Enrique Márquez-Ríos; José Luis Cárdenas-López; Nathaly Montoya-Camacho; Francisco Javier Castillo-Yáñez; María Elena Duarte-Figueroa; Saul Ruiz-Cruz; Rosendo Balois-Morales; Víctor Manuel Ocaño-Higuera

    2015-01-01

    The effect of two commercial in vivo transport methods (cardboard boxes and ixtle sacks) on the physiological condition of Japanese oyster (Crassostrea gigas) was evaluated. Total carbohydrates, glycogen, adenosine 5′-triphosphate (ATP) and related products, adenylate energy charge (AEC), and pH of transported oysters in simulated conditions were determined. The results showed that the ATP initial concentration was low from the beginning of the experiment, and AEC decreased in both transport ...

  10. Exposure to the paralytic shellfish toxin producer Alexandrium catenella increases the susceptibility of the oyster Crassostrea gigas to pathogenic vibrios.

    OpenAIRE

    Celina Abi-Khalil; Carmen Lopez-Joven; Eric Abadie; Veronique Savar; Zouher Amzil; Mohamed Laabir; Jean-Luc Rolland

    2016-01-01

    International audience The multifactorial etiology of massive Crassostrea gigas summer mortalities results from complex interactions between oysters, opportunistic pathogens and environmental factors. In a field survey conducted in 2014 in the Mediterranean Thau Lagoon (France), we evidenced that the development of the toxic dinoflagellate Alexandrium catenella, which produces paralytic shellfish toxins (PSTs), was concomitant with the accumulation of PSTs in oyster flesh and the occurrenc...

  11. Influence of one selected Tisochrysis lutea strain rich in lipids on Crassostrea gigas larval development and biochemical composition

    OpenAIRE

    Da Costa, F.; Petton, Bruno; Mingant, Christian; Bougaran, Gael; Rouxel, Catherine; Quere, Claudie; Wikfors, Gary H.; Soudant, Philippe; Robert, Rene

    2016-01-01

    Effects of a remarkably high overall lipid Tisochrysis lutea strain (T+) upon gross biochemical composition, fatty acid (FA), sterol and lipid class composition of Crassostrea gigas larvae were evaluated and compared with a normal strain of Tisochrysis lutea (T) and the diatom Chaetoceros neogracile (Cg). In a first experiment, the influence of different single diets (T, T+ and Cg) and a bispecific diet (TCg) was studied, whereas, effects of monospecific diets (T and T+) and bispecific diets ...

  12. Reproductive success and fry production of the paiche or pirarucu, Arapaima gigas (Schinz), in the region of Iquitos, Peru

    OpenAIRE

    Nunez Rodriguez, Jesus; Chu-Koo, F.; Berland, Magali; Arevalo, L.; Ribeyro, O.; Duponchelle, Fabrice; Renno, Jean-François

    2011-01-01

    Arapaima gigas (paiche) is the largest scaled fish species living in the Amazon basin. Its biology is both fascinating and misunderstood. In a context of overfishing, hence reduced natural populations, aquaculture of a fish with such interesting characteristics (large size, high growth rate, no intramuscular spines) is an important issue. The development of farming production would also reduce the fishing pressure on natural populations and allow re-stocking programmes in certain areas. To de...

  13. The jumbo squid, Dosidicus gigas (Ommastrephidae), living in oxygen minimum zones I: Oxygen consumption rates and critical oxygen partial pressures

    Science.gov (United States)

    Trueblood, Lloyd A.; Seibel, Brad A.

    2013-10-01

    Dosidicus gigas is a large, metabolically active, epipelagic squid known to undertake diel vertical migrations across a large temperature and oxygen gradient in the Eastern Pacific. Hypoxia is known to cause metabolic suppression in D. gigas. However, the precise oxygen level at which metabolic suppression sets in is unknown. Here we describe a novel ship-board swim tunnel respirometer that was used to measure metabolic rates and critical oxygen partial pressures (Pcrit) for adult squids (2-7kg). Metabolic rate measurements were validated by comparison to the activity of the Krebs cycle enzyme, citrate synthase, in mantle muscle tissue (2-17kg). We recorded a mean routine metabolic rate of 5.91μmolg-1h-1 at 10°C and 12.62μmolg-1h-1 at 20°C. A temperature coefficient, Q10, of 2.1 was calculated. D. gigas had Pcrits of 1.6 and 3.8kPa at 10 and 20°C, respectively. Oxygen consumption rate (MO2) varied with body mass (M) according to MO2=11.57M-0.12±0.03 at 10°C. Citrate synthase activity varied with body mass according to Y=9.32M-0.19±0.02.

  14. Ostreid herpesvirus 1 detection and relationship with Crassostrea gigas spat mortality in France between 1998 and 2006

    Directory of Open Access Journals (Sweden)

    Garcia Céline

    2011-06-01

    Full Text Available Abstract Since its molecular characterisation, Ostreid herpesvirus 1 (OsHV-1 has been regularly detected in Crassostrea gigas in France. Although its pathogenicity was demonstrated on larval stages, its involvement during mortality outbreaks at the juvenile stage was highly suspected but not evidenced. To investigate mortality outbreaks, the French National Network for Surveillance and Monitoring of Mollusc Health (REPAMO carried out two surveys in juvenile C. gigas. The first survey lasted from 1998 to 2006 and was an epidemiological inquiry occurring when oyster farmers reported mortality outbreaks. The second survey, a longitudinal one, was set up in 1998 to complete the network observations on OsHV-1. Data analysis showed a specific pattern of mortality outbreaks associated with OsHV-1 detection. Ostreid herpesvirus 1 detection mainly appeared during the summer, suggesting the influence of the seawater temperature on its occurrence. It mostly presented a patchy distribution in the field in contrast to the nursery. Significant relationship between OsHV-1 detection and spat mortality was found, preferentially in sheltered and closed environments. The longitudinal survey confirmed most of the network observations. Although subsequent works particularly epidemiological surveys would be useful to confirm the causal link between the detection of OsHV-1 and the mortality outbreaks in juvenile C. gigas, the role of OsHV-1 in oyster mortality is progressing.

  15. Bulked segregant analysis of the pirarucu (Arapaima gigas) genome for identification of sex-specific molecular markers.

    Science.gov (United States)

    Almeida, I G; Ianella, P; Faria, M T; Paiva, S R; Caetano, A R

    2013-01-01

    Arapaima gigas (Osteoglossidae) is one of the largest fish species in the Amazon Basin, attaining lengths of over 2.5 m and weights of over 100 kg. Its flesh is prized, and it has great potential for production in aquaculture systems. However, live pirarucu cannot be reliably sexed visually, even after sexual development, since this species does not have clear external sexual dimorphism. Simple and inexpensive methods for sexing immature pirarucu based on DNA markers would facilitate production of this species in commercial operations. We analyzed A. gigas male and female DNA pools with 566 RAPD primers, generating 2609 fragments, with an estimated 1341 segregating polymorphic markers, and an estimated average spacing of 714 kb, which corresponds to less than 0.1% of the species' genome. Two putative sex-specific fragments were initially identified in bulked samples; but they were not confirmed in a study of individual male and female samples. We suggest that A. gigas has developed a non-chromosomal system of sex determination or, alternatively, that the species has undergone a recent loss of the chromosome carrying the sex-determining locus. PMID:24338425

  16. Lethal dose and clinical signs of Aeromonas hydrophila in Arapaima gigas (Arapaimidae), the giant fish from Amazon.

    Science.gov (United States)

    Dias, Marcia K R; Sampaio, Luciana S; Proietti-Junior, Aldo A; Yoshioka, Eliane T O; Rodrigues, Dália P; Rodriguez, Anselmo F R; Ribeiro, Ricardo A; Faria, Fernando S E D V; Ozório, Rodrigo O A; Tavares-Dias, Marcos

    2016-05-30

    Aeromonas hydrophila is causing substantial economic losses in world aquaculture. This study determined the tolerance limit (LD50-96h) of A. hydrophila in Arapaima gigas, and also investigated the clinical signs after intradermal inoculation. Arapaima gigas fingerlings were inoculated intraperitoneally with 0 (control), 1.0×10(5), 1.0×10(6), 1.0×10(7), 1.0×10(9) and 1.0×10(10)CFU/mL of A. hydrophila for the determination of LD50-96h, which was 1.8×10(8)CFU/mL. In another trial with intradermal inoculation of 1.8×10(8)CFU/mL A. hydrophila, there was a 91.6% of mortality between 8 and 23h, and several clinical signs were found. As follows: depigmentation in the tegument, lesions in the tail and fins, loss of balance, reduction of respiratory movements, hemorrhagic foci, necrotic hemorrhages in the kidney, liver and swim bladder, splenomegaly, ascites in the abdominal cavity and hyperemia, enlargement of the gall bladder, among other clinical signs observed. The results showed that A. gigas has a relative tolerance to A. hydrophila when compared to other Neotropical fish species. PMID:27139024

  17. Hábitos alimentarios de Dosidicus gigas (D' Orbigny, 1835 (Cephalopoda: Teuthoidea frente a la costa centro-sur de Chile Feeding habits of Dosidicus gigas (D'Orbigny, 1835 (Cephalopoda: Teuthoidea in the central-south coast off Chile

    Directory of Open Access Journals (Sweden)

    PATRICIO ULLOA

    2006-12-01

    Full Text Available Se estudiaron los hábitos alimentarios del calamar rojo Dosidicus gigas (D'Orbigny, 1835 frente a la costa de Chile centro-sur, durante el invierno del año 2005. Se examinaron un total de 52 estómagos, en todos los cuales había contenido alimentario. Los ejemplares provenían de pescas efectuadas por la flota arrastrera industrial que opera entre 36°39' S y 38°55'S sobre la merluza común Merluccius gayi (Guichenot 1848 y a una profundidad media de 290 m sobre la plataforma continental. Para la descripción del espectro trófico, alimento principal y el establecimiento de las eventuales diferencias sexuales u ontogenéticas en la frecuencia de aparición de los ítemes presa, se utilizaron los métodos numérico, gravimétrico, de frecuencia de ocurrencia, índice de importancia relativa (IIR e índice de similitud porcentual (ISP. No se observaron diferencias sexuales ni ontogenéticas en la frecuencia de aparición de los ítemes presa. Los resultados muestran que D. gigas es un depredador oportunista, principalmente ictiófago, y secundariamente malacófago (incluye el canibalismo y carcinófago. Se discuten los eventuales motivos e implicancias de tal conductaA study on the feeding habits of the jumbo squid Dosidicus gigas (D'Orbigny, 1835 was carried out during the winter season 2005, in waters of the Chilean central and southern Pacific. A total of 52 jumbo squid stomachs from the fishing of the continental slope were collected and examined, in the Eighth and Ninth regions, between 36°40' S and 38°55'S, at an average depth of 290 m. To determine the trophic spectrum, the feeding preferences and the importance of the sex and ontogenetic condition in the diet, the numeric, gravimetric, frequency of occurrence methods, and the index of relative importance and dietary similarity were utilized. The frequency of the prey did not vary with relation to the sex and ontogenetic conditions, and was besides a hight trophic similarity in such

  18. Analysis and Evaluation of Nutritional Components in Angelica keiskei%明月草营养成分的分析及评价

    Institute of Scientific and Technical Information of China (English)

    徐荣; 郭刚军; 袁志章; 杨炎

    2013-01-01

    Contents of nutritional components in Angelica keiskei were determined and evaluated including protein, crude fat, crude fiber, vitamin C, water, total ash, total sugar, total flavonoids, amino acid and mineral element. Results showed that the contents of water, protein, crude fet, total sugar, crude fiber, total ash, vitamin C and total flavonoids in angelica keiskei were 92.70%, 1.99%, 0.35%, 0.21%, 0.68%, 1.40%, 0.08 mg/g and 4.79 mg/g, respectively. Contents of fifteen amino acids,EAA/TAA ratio, and EAA/NEAA ratio were 20.01%, 43.83% and 78.02%, respectively. All kinds of human essential amino acids were found with a balanced proportion and the coefficient of amino acids was 65.10. The first limiting amino acids were Met and Cys in all human essential amino acids. The contents of phosphorus, kalium, calcium, magnesium, iron, zinc, cuprum and manganese in mineral elements were 322 mg/kg, 4210 mg/kg, 1441 mg/kg, 478 mg/kg, 38 mg/kg , 2.36 mg/kg, 1.14 mg/kg and 55.70 mg/kg, respectively. Angelica keiskei was rich in all kinds of nutritional components, which had better exploitation value.%对明月草的氨基酸、矿质元素及其他营养成分进行了分析测定,并进行了营养评价.结果表明,明月草中水分、蛋白质、粗脂肪、总糖、粗纤维、灰分、维生素C与总黄酮的含量为92.70%、1.99%、0.35%、0.21%、0.68%、1.40%、0.08mg/g与4.79 mg/g;含有氨基酸15种,氨基酸总量(TAA)为20.01%. EAA/TAA为43.83%,EAA/NEAA为78.02%,各种人体必需氨基酸种类齐全,且比例均衡,比值系数分(SRC)为65.10.在各种人体必需氨基酸中,第一限制氨基酸为蛋氨酸+胱氨酸;P、K、Ca、Mg、Fe、Zn、Cu、Mn矿质元素的含量为322、4210、1441、478、38、2.36、1.14、55.70 mg/kg,经分析明月草氨基酸、矿质元素及其他营养成分含量丰富,具有很好的开发与利用价值.

  19. Connected components labeling for giga-cell multi-categorical rasters

    Science.gov (United States)

    Netzel, Pawel; Stepinski, Tomasz F.

    2013-09-01

    Labeling of connected components in an image or a raster of non-imagery data is a fundamental operation in fields of pattern recognition and machine intelligence. The bulk of effort devoted to designing efficient connected components labeling (CCL) algorithms concentrated on the domain of binary images where labeling is required for a computer to recognize objects. In contrast, in the Geographical Information Science (GIS) a CCL algorithm is mostly applied to multi-categorical rasters in order to either convert a raster to a shapefile, or for statistical characterization of individual clumps. Recently, it has become necessary to label connected components in very large, giga-cell size, multi-categorical rasters but performance of existing CCL algorithms lacks sufficient speed to accomplish such task. In this paper we present a modification to the popular two-scan CCL algorithm that enables labeling of giga-cell size, multi-categorical rasters. Our approach is to apply a divide-and-conquer technique coupled with parallel processing to a standard two-scan algorithm. For specificity, we have developed a variant of a standard CCL algorithm implemented as r.clump in GRASS GIS. We have established optimal values of data blocks (stemming from the divide-and-conquer technique) and optimal number of computational threads (stemming from parallel processing) for a new algorithm called r.clump3p. The performance of the new algorithm was tested on a series of rasters up to 160 Mcells in size; for largest size test raster a speed up over the original algorithm is 74 times. Finally, we have applied the new algorithm to the National Land Cover Dataset 2006 raster with 1.6×1010 cells. Labeling this raster took 39 h using two-processors, 16 cores computer and resulted in 221,718,501 clumps. Estimated speed up over the original algorithm is 450 times. The r.clump3p works within the GRASS environment and is available in the public domain.

  20. Role of dissolved and particulate cadmium in the accumulation of cadmium in cultured oysters (Crassostrea gigas)

    International Nuclear Information System (INIS)

    Pacific oysters (Crassostrea gigas) collected on the coast of British Columbia, Canada have occasionally shown cadmium (Cd) concentrations at or above 2 μg g-1 (wet weight), which has resulted in the loss of some international markets. This study investigated the source and transfer of Cd to oysters by focusing on the role of dissolved and particulate Cd in seawater. Parameters monitored for 1 year at two oyster farm sites on Vancouver Island included: oyster tissue mass and shell length, Cd in oysters, dissolved Cd, particulate Cd, temperature and salinity. Results show that dissolved Cd was the main source of Cd to the oysters and that Cd was mainly concentrated in the gut tissues. A seasonal trend was observed in Cd in oysters, in which levels were lowest during periods of higher temperatures. Results also indicate that the local oceanographic inputs and sediment diagenesis directly affect dissolved Cd and thereby influence the Cd levels in oysters. Particulate matter was not found to be a source of Cd in oysters, and was actually negatively correlated. This was likely due to the uptake of dissolved Cd by phytoplankton and the effect of phytoplankton on oyster tissue mass

  1. UVA/UVB-induced genotoxicity and lesion repair in Colossoma macropomum and Arapaima gigas Amazonian fish.

    Science.gov (United States)

    Groff, Aline Aparecida; da Silva, Juliana; Nunes, Emilene A; Ianistcki, Martus; Guecheva, Temenouga N; de Oliveira, Alzira Miranda; de Oliveira, Christiane Patrícia Feitosa; Val, Adalberto Luis; Henriques, João A P

    2010-05-01

    Ultraviolet radiation is known to cause adverse effects to aquatic species and aquatic environments. The fish Colossoma macropomum (tambaqui) and Arapaima gigas (pirarucu) live in the Amazon basin, near the Equator, and thus receive high intensity of ultraviolet radiation. Deforestation further aggravates the situation by reducing shade at ground level. The aim of this study was to evaluate the genotoxic effects of UVA and UVB radiation on erythrocytes of tambaqui and pirarucu fish using Micronuclei test and Comet assay. Our study showed that UV radiation caused DNA damage in both species as detected by Comet assay. In addition, there were differences in response to genotoxicity between both species, which are possibly related to their evolutionary history. Tambaqui fish exposed to ultraviolet radiation for different periods presented clear dose-response in DNA damage profile. Significant damage repair was observed 24h after cessation of ultraviolet radiation exposure. At the test conditions used, no significant increase in micronucleated cells was observed in tambaqui and pirarucu fish. Tambaqui proved to be more sensitive to ultraviolet radiation than Pirarucu, as detected by Comet assay, showing statistically higher baseline DNA damage. The present results demonstrated that alkaline Comet assay was very sensitive for detecting the UV-induced genotoxicity during the short exposure period in our study. In addition, the present study also suggests that tambaqui and pirarucu fish are useful sentinel organisms, as their UV sensitivity allows them to be effective monitors of biological hazards in the Amazon region. PMID:20338776

  2. Effects of ocean acidification on immune responses of the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Wang, Qing; Cao, Ruiwen; Ning, Xuanxuan; You, Liping; Mu, Changkao; Wang, Chunlin; Wei, Lei; Cong, Ming; Wu, Huifeng; Zhao, Jianmin

    2016-02-01

    Ocean acidification (OA), caused by anthropogenic CO2emissions, has been proposed as one of the greatest threats in marine ecosystems. A growing body of evidence shows that ocean acidification can impact development, survival, growth and physiology of marine calcifiers. In this study, the immune responses of the Pacific oyster Crassostrea gigas were investigated after elevated pCO2 exposure for 28 days. The results demonstrated that OA caused an increase of apoptosis and reactive oxygen species (ROS) production in hemocytes. Moreover, elevated pCO2 had an inhibitory effect on some antioxidant enzyme activities and decreased the GSH level in digestive gland. However, the mRNA expression pattern of several immune related genes varied depending on the exposure time and tissues. After exposure to pCO2 at ∼2000 ppm for 28 days, the mRNA expressions of almost all tested genes were significantly suppressed in gills and stimulated in hemocytes. Above all, our study demonstrated that elevated pCO2 have a significant impact on the immune systems of the Pacific oyster, which may constitute as a potential threat to increased susceptibility of bivalves to diseases. PMID:26706224

  3. Characterization of GnRH-related peptides from the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Bigot, Laetitia; Zatylny-Gaudin, Céline; Rodet, Franck; Bernay, Benoit; Boudry, Pierre; Favrel, Pascal

    2012-04-01

    Gonadotropin-releasing hormone (GnRH), a key neuropeptide regulating reproduction in vertebrates has now been characterized in a number of non-vertebrate species. Despite the demonstration of its ancestral origin, the structure and the function of this family of peptides remain poorly known in species as distant as lophotrochozoans. In this study, two GnRH-related peptides (Cg-GnRH-a and CgGnRH-G) were characterized by mass spectrometry from extracts of the visceral ganglia of the Pacific oyster Crassostrea gigas. These peptides showed a high degree of sequence identity with GnRHs of other mollusks and annelids and to a lesser extent with those of vertebrates or with AKH and corazonins of insects. Both the mature peptides and the transcript encoding the precursor protein were exclusively expressed in the visceral ganglia. Significant differences in transcriptional activity of Cg-GnRH encoding gene were recorded in the ganglia along the reproductive cycle and according to trophic conditions with a higher level in fed animals compared to starved animals. This suggests the involvement of Cg-GnRHs as synchronizers of nutritional status with energy requirements during reproduction in oyster. Evidence for a role of Cg-GnRHs as neuroregulators and as neuroendocrine factors in bivalve is discussed. PMID:22306476

  4. Partial characterization of an effluent produced by cooking of Jumbo squid (Dosidicus gigas) mantle muscle.

    Science.gov (United States)

    Rosas-Romero, Zaidy G; Ramirez-Suarez, Juan C; Pacheco-Aguilar, Ramón; Lugo-Sánchez, Maria E; Carvallo-Ruiz, Gisela; García-Sánchez, Guillermina

    2010-01-01

    Jumbo squid (Dosidicus gigas) mantle muscle was cooked simulating industrial procedures (95 degrees C x 25 min, 1.2:5 muscle:water ratio). The effluent produced was analyzed for chemical and biochemical oxygen demands (COD and BOD(5), respectively), proximate analysis, flavor-related compounds (free amino acids, nucleotides and carbohydrates) and SDS-PAGE. The COD and BOD(5) exhibited variation among samplings (N=3) (27.4-118.5 g O(2)/L for COD and 11.3-26.7 g O(2)/L for BOD(5)). The effluent consisted of 1% total solids, 75% of which represented crude protein. Sixty percent of the total free amino acid content, which imparts flavor in squid species, corresponded to glutamic acid, serine, glycine, arginine, alanine, leucine and lysine. The nucleotide concentration followed this order, Hx>ADP>AMP>ATP>IMP>HxR. The variation observed in the present work was probably due to physiological maturity differences among the squid specimens (i.e., juvenile versus mature). Solids present in squid cooking effluent could be recovered and potentially used as flavor ingredients in squid-analog production by the food industry. PMID:19748263

  5. Characteristics of deacetylation and depolymerization of β-chitin from jumbo squid (Dosidicus gigas) pens.

    Science.gov (United States)

    Jung, Jooyeoun; Zhao, Yanyun

    2011-09-27

    This study evaluated the deacetylation characteristics of β-chitin from jumbo squid (Dosidicus gigas) pens by using strongly alkaline solutions of NaOH or KOH. Taguchi design was employed to investigate the effect of reagent concentration, temperature, time, and treatment step on molecular mass (MM) and degree of deacetylation (DDA) of the chitosan obtained. The optimal treatment conditions for achieving high MM and DDA of chitosan were identified as: 40% NaOH at 90°C for 6h with three separate steps (2h+2h+2h) or 50% NaOH at 90°C for 6h with one step, or 50% KOH at 90°C for 4h with three steps (1h+1h+2h) or 6h with one step. The most important factor affecting DDA and MM was temperature and time, respectively. The chitosan obtained was then further depolymerized by cellulase or lysozyme with cellulase giving a higher degradation ratio, lower relative viscosity, and a larger amount of reducing-end formations than that of lysozyme due to its higher susceptibility. This study demonstrated that jumbo squid pens are a good source of materials to produce β-chitosan with high DDA and a wide range of MM for various potential applications. PMID:21700271

  6. Onshore-offshore movement of jumbo squid (Dosidicus gigas) on the continental shelf

    Science.gov (United States)

    Stewart, Julia S.; Gilly, William F.; Field, John C.; Payne, John C.

    2013-10-01

    Jumbo squid (Dosidicus gigas) have greatly extended their range in the California Current System, where they forage on a variety of ecologically and economically important species that inhabit both coastal and offshore mesopelagic regions. Swimming abilities and behavior are important factors in assessing the impacts of this range expansion, particularly in regard to foraging in conjunction with onshore-offshore movement over the continental shelf. Here we describe a study of horizontal movements by jumbo squid along and across the continental shelf off Washington, USA, using acoustic tags in association with the Census of Marine Life's Pacific Ocean Shelf Tracking Program (POST) receiver arrays. We detected frequent movements along the shelf break, movement onto the shelf at night, and no evidence of movement as a cohesive school. Our results demonstrate feasibility of using acoustic tags and arrays to document horizontal movements of jumbo squid along and across the continental shelf. This is important in order to determine how those movements overlap with those of other ecologically and commercially important fish species.

  7. Trace element concentrations in the top predator jumbo squid (Dosidicus gigas) from the Gulf of California.

    Science.gov (United States)

    Raimundo, Joana; Vale, Carlos; Rosa, Rui

    2014-04-01

    Jumbo (or Humboldt) squid, Dosidicus gigas, is a large jet-propelled top oceanic predator off the Eastern Pacific. The present study reports, for the first time, concentrations of V, Cr, Mn, Co, Ni, Cu, Zn, As, Se, Cd and Pb in gills, mantle and digestive gland of this powerful pelagic squid in the Gulf of California. Zinc and Cu were the most abundant elements. All elements, with the exception of As, were largely stored in digestive gland; particularly Cd that reached concentrations between 57 and 509 µg g(-1). Significant relationships between tissues were found for Co (digestive gland-gills), As (gills-mantle) and Cd (digestive gland-mantle). Proportionality of Cd concentrations between mantle and digestive gland suggested that detoxification capacity by digestive gland was insufficient to avoid the transfer of this element to mantle and other tissues. Nonetheless, Cd concentrations in the mantle were always below the regulatory limit and, therefore lack of constraints for human consumption. On the basis of the fishery landings, one may estimate that up to 1t of Cd can be annually removed by jumbo squid fisheries. PMID:24530735

  8. A glutamic acid decarboxylase (CgGAD) highly expressed in hemocytes of Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Li, Meijia; Wang, Lingling; Qiu, Limei; Wang, Weilin; Xin, Lusheng; Xu, Jiachao; Wang, Hao; Song, Linsheng

    2016-10-01

    Glutamic acid decarboxylase (GAD), a rate-limiting enzyme to catalyze the reaction converting the excitatory neurotransmitter glutamate to inhibitory neurotransmitter γ-aminobutyric acid (GABA), not only functions in nervous system, but also plays important roles in immunomodulation in vertebrates. However, GAD has rarely been reported in invertebrates, and never in molluscs. In the present study, one GAD homologue (designed as CgGAD) was identified from Pacific oyster Crassostrea gigas. The full length cDNA of CgGAD was 1689 bp encoding a polypeptide of 562 amino acids containing a conserved pyridoxal-dependent decarboxylase domain. CgGAD mRNA and protein could be detected in ganglion and hemocytes of oysters, and their abundance in hemocytes was unexpectedly much higher than those in ganglion. More importantly, CgGAD was mostly located in those granulocytes without phagocytic capacity in oysters, and could dynamically respond to LPS stimulation. Further, after being transfected into HEK293 cells, CgGAD could promote the production of GABA. Collectively, these findings suggested that CgGAD, as a GABA synthase and molecular marker of GABAergic system, was mainly distributed in hemocytes and ganglion and involved in neuroendocrine-immune regulation network in oysters, which also provided a novel insight to the co-evolution between nervous system and immune system. PMID:27208883

  9. The simple neuroendocrine-immune regulatory network in oyster Crassostrea gigas mediates complex functions

    Science.gov (United States)

    Liu, Zhaoqun; Wang, Lingling; Zhou, Zhi; Sun, Ying; Wang, Mengqiang; Wang, Hao; Hou, Zhanhui; Gao, Dahai; Gao, Qiang; Song, Linsheng

    2016-05-01

    The neuroendocrine-immune (NEI) regulatory network is a complex system, which plays an indispensable role in the immunity of the host. In the present study, the bioinformatical analysis of the transcriptomic data from oyster Crassostrea gigas and further biological validation revealed that oyster TNF (CgTNF-1 CGI_10018786) could activate the transcription factors NF-κB and HSF (heat shock transcription factor) through MAPK signaling pathway, and then regulate apoptosis, redox reaction, neuro-regulation and protein folding in oyster haemocytes. The activated immune cells then released neurotransmitters including acetylcholine, norepinephrine and [Met5]-enkephalin to regulate the immune response by arising the expression of three TNF (CGI_10005109, CGI_10005110 and CGI_10006440) and translocating two NF-κB (Cgp65, CGI_10018142 and CgRel, CGI_10021567) between the cytoplasm and nuclei of haemocytes. Neurotransmitters exhibited the immunomodulation effects by influencing apoptosis and phagocytosis of oyster haemocytes. Acetylcholine and norepinephrine could down-regulate the immune response, while [Met5]-enkephalin up-regulate the immune response. These results suggested that the simple neuroendocrine-immune regulatory network in oyster might be activated by oyster TNF and then regulate the immune response by virtue of neurotransmitters, cytokines and transcription factors.

  10. Zooming to the centre of the Milky Way - GigaGalaxy Zoom phase 2

    Science.gov (United States)

    2009-09-01

    The second of three images of ESO's GigaGalaxy Zoom project has just been released online. It is a new and wonderful 340-million-pixel vista of the central parts of our home galaxy as seen from ESO's Paranal Observatory with an amateur telescope. This 34 by 20-degree wide image provides us with a view as experienced by amateur astronomers around the world. However, its incredible beauty and appeal owe much to the quality of the observing site and the skills of Stéphane Guisard, the world-renowned astrophotographer, who is also an ESO engineer. This second image directly benefits from the quality of Paranal's sky, one of the best on the planet, where ESO's Very Large Telescope is located. In addition, Guisard has drawn on his professional expertise as an optical engineer specialising in telescopes, a rare combination in the world of astrophotographers. Guisard, as head of the optical engineering team at Paranal, is responsible for ensuring that the Very Large Telescope has the best optical performance possible. To create this stunning, true-colour mosaic of the Galactic Centre region, Guisard assembled about 1200 individual images, totalling more than 200 hours of exposure time, collected over 29 nights, during Guisard's free time, while working during the day at Paranal [1]. The image shows the region spanning the sky from the constellation of Sagittarius (the Archer) to Scorpius (the Scorpion). The very colourful Rho Ophiuchi and Antares region is a prominent feature to the right, although much darker areas, such as the Pipe and Snake nebulae also stand out. The dusty lane of our Milky Way runs obliquely through the image, dotted with remarkable bright, reddish nebulae, such as the Lagoon and the Trifid Nebulae, as well as NGC 6357 and NGC 6334. This dark lane also hosts the very centre of our Galaxy, where a supermassive black hole is lurking. "The area I have depicted in this image is an incredibly rich region of the sky, and the one I find most beautiful

  11. Extraction and Identification of the Pigment in the Adductor Muscle Scar of Pacific Oyster Crassostrea gigas.

    Directory of Open Access Journals (Sweden)

    Shixin Hao

    Full Text Available In this study, UV (ultraviolet and IR (infrared radiation spectral analysis were integrated to identify the pigment in the adductor muscle scar of the Pacific oyster Crassostrea gigas. The pigment was extracted from the adductor muscle scars of cleaned oyster shells that were pulverized, hydrolyzed in hot hydrochloric acid, purified with diethyl ether, and dissolved in 0.01 mL/L NaOH. The maximum absorption of the pigment in the UV absorption spectrum within the range of 190-500 nm was observed between 210-220 nm. The UV absorbance decreased with increasing wavelength which was consistent with the UV spectral absorption characteristics of melanin. In addition, Fourier transform infrared spectroscopy scanning revealed characteristic absorption peaks that emerged near 3440 cm-1 and 1630 cm-1, which was consistent with infrared scanning features of eumelanin (a type of melanin. This study has demonstrated for the first time that the pigment in the adductor muscle scar of the Pacific oyster is melanin, hinting that the adductor muscle could be another organ pigmenting the mollusc shell with melanin other than mantle.

  12. Linkage disequilibrium in wild and cultured populations of Pacific oyster ( Crassostrea gigas)

    Science.gov (United States)

    Guo, Xiang; Li, Qi; Kong, Lingfeng; Yu, Hong

    2016-04-01

    Linkage disequilibrium (LD) can be applied for mapping the actual genes responsible for variation of economically important traits through association mapping. The feasibility and efficacy of association studies are strongly dependent on the extent of LD which determines the number and density of markers in the studied population, as well as the experimental design for an association analysis. In this study, we first characterized the extent of LD in a wild population and a cultured mass-selected line of Pacific oyster ( Crassostrea gigas). A total of 88 wild and 96 cultured individuals were selected to assess the level of genome-wide LD with 53 microsatellites, respectively. For syntenic marker pairs, no significant association was observed in the wild population; however, three significant associations occurred in the cultured population, and the significant LD extended up to 12.7 cM, indicating that strong artificial selection is a key force for substantial increase of genome-wide LD in cultured population. The difference of LD between wild and cultured populations showed that association studies in Pacific oyster can be achieved with reasonable marker densities at a relatively low cost by choosing an association mapping population. Furthermore, the frequent occurrence of LD between non-syntenic loci and rare alleles encourages the joint application of linkage analysis and LD mapping when mapping genes in oyster. The information on the linkage disequilibrium in the cultured population is useful for future association mapping in oyster.

  13. Epigenetic features in the oyster Crassostrea gigas suggestive of functionally relevant promoter DNA methylation in invertebrates.

    Directory of Open Access Journals (Sweden)

    GuillaumeRiviere

    2014-04-01

    Full Text Available DNA methylation is evolutionarily conserved. Vertebrates exhibit high, widespread DNA methylation whereas invertebrate genomes are less methylated, predominantly within gene bodies. DNA methylation in invertebrates is associated with transcription level, alternative splicing and genome evolution, but functional outcomes of DNA methylation remain poorly described in lophotrochozoans. Recent genome-wide approaches improve understanding in distant taxa such as molluscs, where the phylogenetic position and life traits of Crassostrea gigas make this bivalve an ideal model to study the physiological and evolutionary implications of DNA methylation. We review the literature about DNA methylation in invertebrates and focus on DNA methylation features in the oyster. Indeed, though our MeDIP-seq results confirm predominant intragenic methylation, the profiles depend on the oyster’s developmental and reproductive stage. We discuss the perspective that oyster DNA methylation could be biased toward the 5’-end of some genes, depending on physiological status, suggesting important functional outcomes of putative promoter methylation from cell differentiation during early development to sustained adaptation of the species to the environment.

  14. Salting-in effect on muscle protein extracted from giant squid (Dosidicus gigas).

    Science.gov (United States)

    Zhang, Rui; Zhou, Ru; Pan, Weichun; Lin, Weiwei; Zhang, Xiuzhen; Li, Mengya; Li, Jianrong; Niu, Fuge; Li, Ang

    2017-01-15

    The salting-in effect on muscle protein is well-known in food science but hard to explain using conventional theories. Myofibrillar protein extracted from the giant squid (Dosidicus gigas) was selected as a model muscle protein to study this mechanism in KCl solutions. Changes in the secondary structures of myofibrillar protein molecules caused by concentrated salts, particularly in the paramyosin molecule conformation, have been reported. Zeta-potential determinations showed that these secondary structures have modified protein molecule surfaces. The zeta-potential of the myofibrillar protein molecules fell from -7.24±0.82 to -9.99±1.65mV with increasing salt concentration from 0.1 to 0.5M. The corresponding second virial coefficient increased from -85.43±3.8×10(-7) to -3.45±1.3×10(-7) molmLg(-2). The extended law of corresponding states suggests that reduced attractive interactions increase the protein solubility. Solubility measurements in alternating KCl concentrations showed that the conformational change was reversible. PMID:27542474

  15. THE BEDBUG “XAMUIS” (THASUS GIGAS, A NEW TREATMENT FOR DIABETES OR NUTRIMENTAL CULTURE

    Directory of Open Access Journals (Sweden)

    Echavarría Flores Montserrat

    2013-12-01

    Full Text Available The diabetes type II is a disease in which the organism cannot produce or use insulin properly. The insulin is a hormone that transforms the sugar, starch and food in energy so that it can make use of it. Although the genetic and physical factors, such as obesity and the lack of exercise affect the health of a person, the real cause of diabetes is unknown. The objective of this study was determining the benefits that people, who suffer from diabetes type II, obtain by eating the bedbugs “Xohues” or “shamues” (Thasus gigas. In addition, this project intended to diagnose how this food intake affects medical treatments. An exploratory study was carried out based on a survey conducted among the residents of Actopan, Hidalgo who suffer from diabetes mellitus type II in order to investigate the intake of “xohues” or “shamues” and their adherence to medical treatment. The initial average glucose was 184 mg/dl in the interviewed people with a minimum of 33 mg/dl and a maximum of 394 mg/dl The people had pointed out to feel better with the intake of these insects, although most of the population did not continue with the medical treatment afterwards, 5 % detachment had their medical treatment, this represents an imminent risk for the population. Insects are an important source of alimentation and a natural alternative for the treatment of diabetes mellitus type II.

  16. X-ray Properties of the GigaHertz-Peaked and Compact Steep Spectrum Sources

    CERN Document Server

    Siemiginowska, Aneta; Aldcroft, Thomas L; Bechtold, Jill; Elvis, Martin

    2008-01-01

    We present {\\it Chandra} X-ray Observatory observations of Giga-Hertz Peaked Spectrum (GPS) and Compact Steep Spectrum (CSS) radio sources. The {\\it Chandra} sample contains 13 quasars and 3 galaxies with measured 2-10 keV X-ray luminosity within $10^{42} - 10^{46}$ erg s$^{-1}$. We detect all of the sources, five of which are observed in X-ray for the first time. We study the X-ray spectral properties of the sample. The measured absorption columns in the quasars are different than those in the galaxies in the sense that the quasars show no absorption (with limits $\\sim 10^{21} \\rm cm^{-2}$) while the galaxies have large absorption columns ($> 10^{22} \\rm cm^{-2}$) consistent with previous findings. The median photon index of the sources with high S/N is $\\Gamma=1.84 \\pm0.24$ and it is larger than the typical index of radio loud quasars. The arcsec resolution of {\\it Chandra} telescope allows us to investigate X-ray extended emission, and look for diffuse components and X-ray jets. We found X-ray jets in two ...

  17. The hard X-ray view of Giga-Hertz Peaked Spectrum Radio Galaxies

    CERN Document Server

    Guainazzi, M; Stanghellini, C; Grandi, P; Piconcelli, E; Azibuke, C

    2005-01-01

    We present the first broadband X-ray observations of 4 Giga-Hertz Peaked Spectrum (GPS) radio galaxies at redshift 2 keV) X-rays. All sources were detected. Their radio-to-X-ray spectral energy distributions are similar, except for PKS0941-080, which is by about two orders of magnitude X-ray under-luminous. The comparison between the full sample of GPS galaxies with measurements in hard X-rays and a control sample of radio galaxies rules out intrinsic X-ray weakness as an origin for the lower detection rate of GPS sources in X-ray surveys. 4 out of 7 GPS galaxies exhibit large X-ray column densities, whereas for the remaining 3 this measurement is hampered by the poor spectral statistics. Bearing in mind the still low number statistics in both the GPS and the control sample, the average column density measured in GPS galaxies is larger than in FRI or Broad Line Region FRII radio galaxies, but consistent with that measured in High-Excitation FRII galaxies. This leads to locating the absorbing gas in an obscuri...

  18. On-Chip Multi-Giga Bit Cycle-to-Cycle Jitter Measurement Circuit

    Institute of Scientific and Technical Information of China (English)

    ZHANG Jingkai; Chung Len Lee; TIAN Chao; YU Fei

    2007-01-01

    This paper presents an on-chip measurement circuit to measure multi-giga bit cycle-to-cycle jitter based on the vernier occillator (VO), which is inherited from the famous vernier delay line. The calibration method is also given. The circuit adopts a differential digital controlled delay element, which makes the circuit flexible in adjusting the measurement resolution, and a highly sensitive phase capturer, which makes the circuit able to measure jitters in pico-second range. The parallel structure makes it possible to measure consecutive cycle-to-cycle jitters. The performance of the circuit was verified via simulation with SMIC 0.18 urn process. During simulation under the clock with the period of 750 ps, the error between the measured RMS jitter and the theoretical RMS jitter was just 2.79 ps. Monte Carlo analysis was also conducted. With more advanced technology, the circuit can work better. This new structure can be implemented in chips as a built-in self-test IP core for testing jitter of PLL or other clocks.

  19. The X-ray view of Giga-Hertz Peaked Spectrum Radio Galaxies

    CERN Document Server

    Tengstrand, Olof; Siemiginowska, A; Bonilla, N Fonseca; Labiano, A; Worrall, D M; Grandi, P; Piconcelli, E

    2009-01-01

    This paper presents the X-ray properties of a flux- and volume-limited complete sample of 16 Giga-Hertz Peaked Spectrum (GPS) galaxies. This study addresses three basic questions in our understanding of the nature and evolution of GPS sources: a) What is the physical origin of the X-ray emission in GPS galaxies? b) Which physical system is associated with the X-ray obscuration? c) What is the "endpoint" of the evolution of compact radio sources? We obtain a 100% (94%) detection fraction in the 0.5-2 keV (0.5-10 keV) energy band. GPS galaxy X-ray spectra are typically highly obscured. The X-ray column density is larger than the HI column density measured in the radio by a factor 10 to 100. GPS galaxies lie well on the extrapolation to high radio powers of the correlation between radio and X-ray luminosity known in low-luminosity FRI radio galaxies. On the other hand, GPS galaxies exhibit a comparable X-ray luminosity to FRII radio galaxies, notwithstanding their much larger radio luminosity. The X-ray to radio...

  20. Response to Selection for Fast Growth in the Second Generation of Pacific Oyster (Crassostrea gigas)

    Institute of Scientific and Technical Information of China (English)

    WANG Qingzhi; LI Qi; KONG Lingfeng; YU Ruihai

    2012-01-01

    Mass selection for fast growth was conducted in three Pacific oyster(Crassostrea gigas)stocks from China,Japan and Korea using previously established lines(CS1,JS 1,and KS 1).To determine whether continuous progress can be achieved by selection for growth,the progeny of three second-generation Pacific oyster lines was selected for shell height and evaluated via a 400-day farming experiment.When harvested at the end of the experiment,the selected crosses of CS2,JS2,and KS2 lines grew by 9.2%,10.2% and 9.6% larger than the control crosses,respectively.During grow-out stage,the genetic gain of three selected lines was (10.2 ± 1.4)%,(10.4 ± 0.3)%,and(8.4 ± 1.6)%,respectively;and the corresponding realized heritability was 0.457 ± 0.143,0.312 ±0.071 and 0.332 ± 0.009,respectively.These results indicated that the selection for fast growth achieved steady progress in the second generation of oyster.Our work provides supportive evidence for the continuity of the Pacific oyster selective breeding program.

  1. Transport of Twelve Coumarins from Angelicae Pubescentis Radix across a MDCK-pHaMDR Cell Monolayer-An in Vitro Model for Blood-Brain Barrier Permeability.

    Science.gov (United States)

    Yang, Yan-Fang; Xu, Wei; Song, Wei; Ye, Min; Yang, Xiu-Wei

    2015-01-01

    Angelicae Pubescentis Radix (APR), a widely used traditional Chinese medicine, is reported to have central nervous system activities. The purpose of this study was to characterize the blood-brain barrier permeability of twelve coumarins from APR including umbelliferone (1), osthol (2), scopoletin (3), peucedanol (4), ulopterol (5), angepubebisin (6), psoralen (7), xanthotoxin (8), bergapten (9), isoimperatorin (10), columbianadin (11), and columbianetin acetate (12) with an in vitro model using a MDCK-pHaMDR cell monolayer. The cell monolayer was validated to be suitable for the permeation experiments. The samples' transports were analyzed by high performance liquid chromatography and their apparent permeability coefficients (Papp) were calculated. According to the Papp value, most coumarins could be characterized as well-absorbed compounds except for 4, 10 and 11 which were moderately absorbed ones, in concentration-dependent and time-dependent manners. The results of P-glycoprotein (P-gp) inhibitor (verapamil) experiments showed that the transport of coumarin 4 was affected by the transport protein P-gp. Sigmoid functions between permeability log(Papp AP-BL*MW0.5) and log D (at pH 7.4) were established to analyze the structure-activity relationship of coumarins. The results provide useful information for discovering the substance basis for the central nervous system activities of APR, and predicting the permeability of other coumarins through BBB. PMID:26121397

  2. Transport of Twelve Coumarins from Angelicae Pubescentis Radix across a MDCK-pHaMDR Cell Monolayer—An in Vitro Model for Blood-Brain Barrier Permeability

    Directory of Open Access Journals (Sweden)

    Yan-Fang Yang

    2015-06-01

    Full Text Available Angelicae Pubescentis Radix (APR, a widely used traditional Chinese medicine, is reported to have central nervous system activities. The purpose of this study was to characterize the blood-brain barrier permeability of twelve coumarins from APR including umbelliferone (1, osthol (2, scopoletin (3, peucedanol (4, ulopterol (5, angepubebisin (6, psoralen (7, xanthotoxin (8, bergapten (9, isoimperatorin (10, columbianadin (11, and columbianetin acetate (12 with an in vitro model using a MDCK-pHaMDR cell monolayer. The cell monolayer was validated to be suitable for the permeation experiments. The samples’ transports were analyzed by high performance liquid chromatography and their apparent permeability coefficients (Papp were calculated. According to the Papp value, most coumarins could be characterized as well-absorbed compounds except for 4, 10 and 11 which were moderately absorbed ones, in concentration-dependent and time-dependent manners. The results of P-glycoprotein (P-gp inhibitor (verapamil experiments showed that the transport of coumarin 4 was affected by the transport protein P-gp. Sigmoid functions between permeability log(Papp AP-BL*MW0.5 and log D (at pH 7.4 were established to analyze the structure-activity relationship of coumarins. The results provide useful information for discovering the substance basis for the central nervous system activities of APR, and predicting the permeability of other coumarins through BBB.

  3. Hábitos alimentarios de Dosidicus gigas (D' Orbigny, 1835) (Cephalopoda: Teuthoidea) frente a la costa centro-sur de Chile Feeding habits of Dosidicus gigas (D'Orbigny, 1835) (Cephalopoda: Teuthoidea) in the central-south coast off Chile

    OpenAIRE

    PATRICIO ULLOA; MARTA FUENTEALBA; VÍCTOR RUIZ

    2006-01-01

    Se estudiaron los hábitos alimentarios del calamar rojo Dosidicus gigas (D'Orbigny, 1835) frente a la costa de Chile centro-sur, durante el invierno del año 2005. Se examinaron un total de 52 estómagos, en todos los cuales había contenido alimentario. Los ejemplares provenían de pescas efectuadas por la flota arrastrera industrial que opera entre 36°39' S y 38°55'S sobre la merluza común Merluccius gayi (Guichenot 1848) y a una profundidad media de 290 m sobre la plataforma continental. Para ...

  4. Mercury in cultured oysters (Crassostrea gigas Thunberg, 1793 and C. corteziensis Hertlein, 1951) from four coastal lagoons of the SE Gulf of California, Mexico.

    Science.gov (United States)

    Osuna-Martínez, C C; Páez-Osuna, F; Alonso-Rodríguez, R

    2010-09-01

    In order to determine the mercury concentrations in cultured oysters from coastal lagoons (SE Gulf of California), several individuals of Crassostrea gigas and C. corteziensis were collected and their mercury levels were measured with a cold vapor analyzer. The mean concentrations during the rainy and dry seasons, respectively, were 0.70 and 0.15 microg g(-1) in C. gigas and 0.56 and 0.18 microg g(-1) in C. corteziensis. During the rainy season, elevated mercury contents are apparently related to terrigen transport from the watershed, while during the dry season, the moderate levels are related to upwellings. PMID:20697884

  5. Oxygen isotope fluctuations in a modern North Sea oyster (Crassostrea gigas) compared with annual variations in seawater temperature

    DEFF Research Database (Denmark)

    Ullmann, Clemens Vinzenz; Wiechert, Uwe; Korte, Christoph

    2010-01-01

    A total of 181 oxygen isotope values from sequential samples of the left shell of a modern Pacific Oyster (Crassostrea gigas) that lived on a sub-tidal oyster bank in the List Basin (North Sea, Germany) shows periodically varying values between + 1.3‰ and -2.5‰. In order to test whether these d18O...... fluctuations reflect seawater temperature changes, the isotope values of the shell were compared to actual seawater temperature variations from the region. C. gigas serves as an excellent proxy for temperature of palaeoseawater and the results show that the examined oyster precipitated its shell in d18O...

  6. Functional characterization of a short neuropeptide F-related receptor in a lophotrochozoan, the mollusk Crassostrea gigas.

    Science.gov (United States)

    Bigot, Laetitia; Beets, Isabel; Dubos, Marie-Pierre; Boudry, Pierre; Schoofs, Liliane; Favrel, Pascal

    2014-08-15

    Members of the short neuropeptide F (sNPF) family of peptides and their cognate receptors play key roles in a variety of physiological processes in arthropods. In silico screening of GigasDatabase, a specific expressed sequence tag database from the Pacific oyster Crassostrea gigas, resulted in the identification of a receptor (Cg-sNPFR-like) phylogenetically closely related to sNPF receptors (sNPFRs) of insects. A reverse endocrinology approach was undertaken to identify the peptide ligand(s) of this orphan receptor. Though structurally distinct from insect sNPFs, three RFamide peptides derived from the same precursor, i.e. GSLFRFamide, SSLFRFamide and GALFRFamide, specifically activate the receptor in a dose-dependent manner, with respective EC50 values (half-maximal effective concentrations) of 1.1, 2.1 and 4.1 μmol l(-1). We found that both Cg-sNPFR-like receptor and LFRFamide encoding transcripts are expressed in the oyster central nervous system and in other tissues as well, albeit at lower levels. Mass spectrometry analysis confirmed the wide distribution of LFRFamide mature peptides in several central and peripheral tissues. The Cg-sNPFR-like receptor was more abundantly expressed in ganglia of females than of males, and upregulated in starved oysters. In the gonad area, highest receptor gene expression occurred at the start of gametogenesis, when storage activity is maximal. Our results suggest that signaling of LFRFamide peptides through the Cg-sNPFR-like receptor might play a role in the coordination of nutrition, energy storage and metabolism in C. gigas, possibly by promoting storage at the expense of reproduction. PMID:24948637

  7. Locomotion and behavior of Humboldt squid, Dosidicus gigas, in relation to natural hypoxia in the Gulf of California, Mexico.

    Science.gov (United States)

    Gilly, William F; Zeidberg, Louis D; Booth, J Ashley T; Stewart, Julia S; Marshall, Greg; Abernathy, Kyler; Bell, Lauren E

    2012-09-15

    We studied the locomotion and behavior of Dosidicus gigas using pop-up archival transmitting (PAT) tags to record environmental parameters (depth, temperature and light) and an animal-borne video package (AVP) to log these parameters plus acceleration along three axes and record forward-directed video under natural lighting. A basic cycle of locomotor behavior in D. gigas involves an active climb of a few meters followed by a passive (with respect to jetting) downward glide carried out in a fins-first direction. Temporal summation of such climb-and-glide events underlies a rich assortment of vertical movements that can reach vertical velocities of 3 m s(-1). In contrast to such rapid movements, D. gigas spends more than 80% of total time gliding at a vertical velocity of essentially zero (53% at 0±0.05 m s(-1)) or sinking very slowly (28% at -0.05 to -0.15 m s(-1)). The vertical distribution of squid was compared with physical features of the local water column (temperature, oxygen and light). Oxygen concentrations of ≤20 μmol kg(-1), characteristic of the midwater oxygen minimum zone (OMZ), can influence the daytime depth of squid, but this depends on location and season, and squid can 'decouple' from this environmental feature. Light is also an important factor in determining daytime depth, and temperature can limit nighttime depth. Vertical velocities were compared over specific depth ranges characterized by large differences in dissolved oxygen. Velocities were generally reduced under OMZ conditions, with faster jetting being most strongly affected. These data are discussed in terms of increased efficiency of climb-and-glide swimming and the potential for foraging at hypoxic depths. PMID:22915711

  8. [Reproductive activity of Strombus gigas (Mesogasteropoda: Strombidae) in differente habitats of Alacranes reef, Yucatán].

    Science.gov (United States)

    Pérez Pérez, Manuel; Aldana Aranda, Dalila

    2003-06-01

    The spawning relationships with temperature/photoperiod of Strombus gigas were investigated considering three habitats in Alacranes Reef, Yucatan, between February 1999 and March 2000. The sites were 22 degrees 34'N, 89 degrees 42'W (site 1); 22 degrees 29'N, 89"45'W (site 2) and 22 degrees 22'N, 89 degrees 39'W (site 3). At each site, transects (100 m x 10 m) were done. Different kinds of reproductive behavior of S. gigas was observed: such as copulating and egg-laying. Individuals alone and egg masses were registered as well. The S. gigas shell length and lip thickness were measured. High density of adults was found at site 2 with 87 conchs in one transect of 1000 m2. The mean density per m2 was 0.004 for site 1; 0.035 for site 2; and 0.003 for site 3. The mean shell length was 220 mm and the lip thickness mean was 16 mm (N = 783) for all sites. In February 1999 egg-laying female was found on sand. There was a high reproductive activity at site 2 with 8 egg-laying and 18 egg masses. Minimum reproductive activity was found at site 3 with 2 egg masses. The bottom-water temperature was related positively with copulating pairs (r = 0.723, f = 11.05, p < 0.01) and egg masses (r = 0.736, f = 11.82, p < 0.1). Correlation between photoperiod with copulating pairs (r = 0.857, f = 27.78, p < 0.01) and egg masses (r = 0.782, f = 15.77, p < 0.01) were found as well. PMID:15264562

  9. Use of nanoindentation technique for a better understanding of the fracture toughness of Strombus gigas conch shell

    Energy Technology Data Exchange (ETDEWEB)

    Romana, L., E-mail: laurence.romana@univ-ag.fr [Groupe de Technologie des Surfaces et des Interfaces, Université des Antilles et de la Guyane, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Thomas, P.; Bilas, P. [Groupe de Technologie des Surfaces et des Interfaces, Université des Antilles et de la Guyane, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Mansot, J.L. [Groupe de Technologie des Surfaces et des Interfaces, Université des Antilles et de la Guyane, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Centre Commun de Caractérisation des Matériaux, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Merrifiels, M. [Groupe de Technologie des Surfaces et des Interfaces, Université des Antilles et de la Guyane, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Bercion, Y. [Centre Commun de Caractérisation des Matériaux, 97 159 Pointe à Pitre, French West Indies, Guadeloupe (France); Aranda, D. Aldana [CINVESTAV IPN Unidad Merida, Recursos del Mar, Laboratorio de Biología y Acuacultura de Moluscos, Km 6 antigua Carretera a Progreso, Cp 97310 Cordemex (Mexico)

    2013-02-15

    In this work the nanochemical properties of the composite organomineral biomaterial constituting Strombus gigas conch shell are studied by means of dynamic mechanical analyses associated to nanoidentation technique. The measurements are performed on shell samples presenting different surface orientations relative to the growth axis of the conch shell. The influence of the organic component of the biomaterial on its nanomechanical properties is also investigated by studying fresh and dried S. gigas conch shells. Monocrystalline aragonite is used as a reference. For the understanding of nanochemical behaviour, special attention is paid to the pop in events observed on the load/displacement curves which results from nanofractures' initiation and propagation occuring during the load process. In order to better understand the mechanical properties systematic studies of the structure and morphology are performed using scanning electron microscopy, atomic force microscopy and X-ray diffractometry. The hardness and Young's modulus values measured on bio aragonite samples are close to those of the aragonite mineral standard. This surprising result shows that, H and E values are not related to the bio composition and lamellar structure of the bio aragonite. However, it was found that the organic layer and the micro architecture strongly influence the nanofracture initiation and propagation processes in the samples. Statistic study of the pop-in events can help to predict the macroscopic mechanical behaviour of the material. - Highlights: ► Nanomechanical properties of Strombus gigas conch shell ► Low influence of the crossed lamellar structure on H and E values at the nano scale ► Strong influence of the crossed lamellar on nanocracks initiation ► Correlation between mechanical behaviors at the macro and nano scales.

  10. Development of a comet-FISH assay for the detection of DNA damage in hemocytes of Crassostrea gigas

    OpenAIRE

    Perez Garcia, Maria Concepcion; Rouxel, Julien; Akcha, Farida

    2015-01-01

    In this work, the DNA-damaging effect of hydrogen peroxide on the structural integrity of nucleolar organizer regions (NORs) was studied for the first time by comet-FISH in the Pacific oyster Crassostrea gigas. Global DNA damage was assessed in hemocytes using an alkaline version of the comet assay. Next, NOR sensitivity was analysed by mapping major rDNA repeat unit by fluorescence in situ hybridisation (FISH) on the same comet slides. Exposure of hemocytes to 100 μM of hydrogen peroxide ind...

  11. VALOR AGREGADO DE LAS ESPECIES Brycon erythropterum (SÁBALO), Colossoma macropomum (GAMITANA), Arapaima gigas (PAICHE) y Agouti paca (MAJAS)

    OpenAIRE

    Doylith Vásquez Jurafo; Cinthya Córdova Ríos; Wendy Olórtegui Morey; Nirsa Cachique Oliveira; Luis Silva Ramos; Ricardo García Pinchi

    2012-01-01

    El presente trabajo tiene como objetivo  la obtención de  productos mínimamente procesados (PMP) de Brycon erythropterum (SÁBALO), Colossoma macropomum (GAMITANA), Arapaima gigas (PAICHE), y Agouti paca (MAJAS) congelado y empacado al vacio. Para las especies piscícolas, se ha aplicado un diseño factorial de 32 con dos factores de estudios: concentración de NaCl en la solución osmótica con tres niveles (15, 20 y 25 %) y temperatura de proceso  con tres niveles de estudio (5, 10 y 15 °C). Para...

  12. In Vivo RNA Interference of a Gonad-Specific Transforming Growth Factor-beta in the Pacific Oyster Crassostrea gigas

    OpenAIRE

    Huvet, Arnaud; Fleury, Elodie; Corporeau, Charlotte; Quillien, Virgile; Daniel, Jean-yves; Riviere, Guillaume; Boudry, Pierre; Fabioux, Caroline

    2012-01-01

    We investigated the role of oyster gonadal TGF beta (og-TGF beta) in the reproduction of Crassostrea gigas, using an in vivo RNA interference approach. We designed double-stranded RNA targeting og-TGF beta, which is specifically expressed in the somatic cells surrounding germ cells in the gonad of both male and female oysters. In vivo injection of this og-TGF beta dsRNA into the gonad led to knock-down phenotypes for both sexes, with significant reduction (77.52% relative to controls) of the ...

  13. Effect of phytoplankton and temperature on the reproduction of the Pacific oyster Crassostrea gigas: investigation through DEB theory

    OpenAIRE

    Bernard, Ismael; De Kermoysan, Goulwen; Pouvreau, Stephane

    2011-01-01

    DEB theory can be used to obtain a detailed description of energy allocation in organisms and the control of this allocation by temperature and food concentration. In this study, we modified the model of Bourlès et al. (2009) developed for the Pacific oyster, Crassostrea gigas, to improve the description of reproductive effort. The model was amended in two ways: a new set of parameters was incorporated and a full description of gonad construction in spring was added, with a new state variable...

  14. Growth and reproductive investment of introduced Pacific oysters Crassostrea gigas in southern European waters

    OpenAIRE

    Cardoso, J.F.M.F.; Peralta, N.R.E.; J. P. Machado; H. W. van der Veer

    2013-01-01

    Growth and reproductive investment of cultured Pacific oysters Crassostrea gigas were studied in two south-western European estuaries: the Ria de Ribadeo in Spain and the Ria Formosa in Portugal. Developing gonads were found in individuals >23.5 mm shell length in the Ria Formosa and >27.5 mm shell length in the Ria de Ribadeo. Although the amount of gonadal mass in relation to total body mass was higher in the Ria de Ribadeo, oysters from this location did not spawn completely. In contrast, ...

  15. Hydroacoustic survey of the jumbo squid Dosidicus gigas in the Gulf of California during March and September-October 2010

    OpenAIRE

    Robinson, Carlos J.; Laura Avilés-Díaz; Jaime Gómez-Gutiérrez; César Salinas-Zavala; Susana Camarillo-Coop; Arminda Mejia-Rebollo

    2014-01-01

    The horizontal and vertical distribution and the dorsal mantle length (DML) of the jumbo squid (Dosidicus gigas) were investigated in the Gulf of California (26-33 °N) during March and September-October 2010 using a Simrad EY-60 echosounder (120 kHz split beam transducer) and jig sampling. During March jumbo squids were captured and echo-detected off Santa Rosalía and around and south of the Grandes Islas region, in regions where satellite sea surface temperatures ranged between 16.5 and 18 °...

  16. Age, growth and maturation of jumbo squid Dosidicus gigas (Cephalopoda: Ommastrephidae) from the Gulf of California, México

    OpenAIRE

    Markaida, U.; Quiñonez Velazquez, Casimiro; Nishizaki S., O.

    2004-01-01

    This study describes the age and growth of large specimens of the jumbo squid Dosidicus gigas that supported the fishery in the Gulf of California in 1995-1997. Statoliths of 299 females (10.8-87.5 cm mantle length, ML) and 147 males (17-73.9 cm ML) were read. Assuming a daily rhythm of statolith deposition the smallest female (10.8 cm ML) was 84 days old and the largest (87.5 cm ML) 386 days old. The oldest females were 14-15 months old. The smallest male (17 cm ML) was 135 days old and the ...

  17. Seasonal variation of Hepatozoon spp. (Apicomplexa, Hepatozoidae) parasitemia from Boa constrictor amarali (Serpentes, Boidae) and Hydrodynastes gigas (Serpentes, Colubridae).

    Science.gov (United States)

    de Vieira Santos, Mariana Morena; O'Dwyer, Lucia Helena; da Silva, Reinaldo José

    2005-09-01

    The aim of this study was to evaluate the parasitemia variation of three Hepatozoon species in Brazilian snakes. This study was conducted between 2001 and 2003 and included Hepatozoon terzii from Boa constrictor amarali, and Hepatozoon migonei and Hepatozoon cyclagrasi from Hydrodynastes gigas. It was observed that the parasitemia tended to decrease in all three Hepatozoon species but the parasites were not eliminated. This data suggest that Hepatozoon infection may be similar to Toxoplasma gondii infection, in that it persists throughout host life. PMID:15999279

  18. New Insight for the Genetic Evaluation of Resistance to Ostreid Herpesvirus Infection, a Worldwide Disease, in Crassostrea gigas.

    Directory of Open Access Journals (Sweden)

    Lionel Dégremont

    Full Text Available The Pacific oyster, Crassostrea gigas, is the most important commercial oyster species cultivated in the world. Meanwhile, the ostreid herpesvirus 1 (OsHV-1 is one of the major pathogens affecting the Pacific oyster, and numerous mortality outbreaks related to this pathogen are now reported worldwide. To assess the genetic basis of resistance to OsHV-1 infection in spat C. gigas and to facilitate breeding programs for such a trait, if any exist, we compared the mortality of half- and full-sib families using three field methods and a controlled challenge by OsHV-1 in the laboratory. In the field, three methods were tested: (A one family per bag; (B one family per small soft mesh bag and all families inside one bag; (C same as the previous methods but the oysters were individually labelled and then mixed. The mean mortality ranged from 80 to 82% and was related to OsHV-1 based on viral DNA detection. The narrow-sense heritability for mortality, and thus OsHV-1 resistance, ranged from 0.49 to 0.60. The high positive genetic correlations across the field methods suggested no genotype by environment interaction. Ideally, selective breeding could use method B, which is less time- and space-consuming. The narrow sense heritability for mortality under OsHV-1 challenge was 0.61, and genetic correlation between the field and the laboratory was ranged from 0.68 to 0.75, suggesting a weak genotype by environment interaction. Thus, most of families showing the highest survival performed well in field and laboratory conditions, and a similar trend was also observed for families with the lowest survival. In conclusion, this is the first study demonstrating a large additive genetic variation for resistance to OsHV-1 infection in C. gigas, regardless of the methods used, which should help in selective breeding to improve resistance to viral infection in C. gigas.

  19. Inheritance of 15 microsatellites in the Pacific oyster Crassostrea gigas: segregation and null allele identification for linkage analysis

    Institute of Scientific and Technical Information of China (English)

    LI Li; GUO Ximing; ZHANG Guofan

    2009-01-01

    Microsatellites were screened in a backcross family of the Pacific oyster, Crassostrea gigas. Fifteen microsatellite loci were distinguishable and polymorphic with 6 types of allele-combinations. Null alleles were detected in 46.7% of loci, accounting for 11.7% of the total alleles. Four loci did not segregate in Mendelian Ratios. Three linkage groups were identified among 7 of the 15 segregating loci. Fluorescence-based automated capillary electrophoresis (ABI 310 Genetic Analyzer) that used to detect the microsatellite loci, has been proved a fast, precise, and reliable method in microsatellite genotyping.

  20. Pengaruh chitosan belangkas (Tachypleus gigas nanopartikel terhadap celah antara berbagai jenis semen ionomer kaca dengan dentin

    Directory of Open Access Journals (Sweden)

    Henny Sutrisman

    2014-09-01

    Full Text Available Background: The development of dental material restoration is regarded to be relevant to obtain a better bonding between dental structure and restorative materials. Glass ionomer cement (GIC is a bioactive material. Resin-modified GIC (RMGIC is an alternative to the conventional glass ionomer. Nowadays with nano technology, this material is available in nano particle glass ionomer form in order to enhance the bond strength between tooth structure and restoration. The use of the natural product in dentistry such as chitosan has increased widely. Chitosan is one of the natural materials that used to improve the bioactivity of the glass ionomer. studies showed that addition of chitosan high molecule to GIC can increase mechanical performance and capability and also as a catalyst to release fluoride ions. Purpose: This study was aimed to examine the effect of the addition of high molecular nanoparticle chitosan derived from horseshoe crab (Tachypleus gigas on interface of RMGIC, nano RMGIC and the dentin surface. Methods: Nano particle chitosan was added to the restorative materials and then applied to the class I cavity of premolar and then the tooth was sectioned with diamond disc. specimens were prepared for sEM examination. Results: The result showed that the addition of chitosan increases adhesion between restoration and dentin structure. Conclusion: The addition of nanoparticle chitosan with a high molecular weight of 0.015% into RMGIC and nanoparticle RMGIC can improve the adhesion of restorative material to dentin structure.Latar belakang: Perkembangan restorasi bahan gigi untuk mendapatkan ikatan yang lebih baik antara struktur gigi dan bahan restoratif. semen ionomer kaca (sIK adalah bahan bioaktif. semen ionomer kaca modifikasi resin (sIKMR adalah sebuah alternatif untuk ionomer kaca konvensional. saat ini dengan teknologi nano, bahan ini tersedia dalam bentuk partikel nano ionomer kaca untuk meningkatkan kekuatan ikatan antara struktur

  1. Tenacibaculum crassostreae sp. nov., isolated from the Pacific oyster, Crassostrea gigas.

    Science.gov (United States)

    Lee, Young Sun; Baik, Keun Sik; Park, So Yeon; Kim, Eun Mi; Lee, Dong-Heon; Kahng, Hyung-Yeel; Jeon, Che Ok; Jung, Jae Sung

    2009-07-01

    A rod-shaped, yellow-pigmented, aerobic, Gram-negative bacterium, designated strain JO-1(T), was isolated from an apparently healthy Pacific oyster, Crassostrea gigas, collected at Wan Island, Korea. It grew at 15-37 degrees C (optimum 30 degrees C) only in the presence of sea salts. Strain JO-1(T) hydrolysed casein, Tween 80 and starch. The major fatty acids were iso-C(15 : 0) (23.8 %), summed feature 3 (comprising C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH; 14.5 %) and iso-C(15 : 1) G (14.1 %). Analysis of the 16S rRNA gene sequence indicated that strain JO-1(T) was a member of the genus Tenacibaculum in the family Flavobacteriaceae, with sequence similarity of 94.6-97.8 % to the type strains of recognized members of the genus. The G+C content of the genomic DNA was 31.4 mol%. DNA-DNA relatedness levels between strain JO-1(T) and the five closest relatives, Tenacibaculum litoreum KCCM 42115(T), T. lutimaris KCTC 12302(T), T. aestuarii KCTC 12569(T), T. mesophilum DSM 13764(T) and T. adriaticum JCM 14633(T), were less than 28 %. Phylogenetic analyses and differences in physiological and biochemical characteristics suggested that strain JO-1(T) (=KCTC 22329(T) =JCM 15428(T)) should be classified as the type strain of a novel species within the genus Tenacibaculum, for which the name Tenacibaculum crassostreae sp. nov. is proposed. PMID:19542127

  2. Sequential isotopic signature along gladius highlights contrasted individual foraging strategies of jumbo squid (Dosidicus gigas.

    Directory of Open Access Journals (Sweden)

    Anne Lorrain

    Full Text Available BACKGROUND: Cephalopods play a major role in marine ecosystems, but knowledge of their feeding ecology is limited. In particular, intra- and inter-individual variations in their use of resources has not been adequatly explored, although there is growing evidence that individual organisms can vary considerably in the way they use their habitats and resources. METHODOLOGY/PRINCIPAL FINDINGS: Using δ(13C and δ(15N values of serially sampled gladius (an archival tissue, we examined high resolution variations in the trophic niche of five large (>60 cm mantle length jumbo squids (Dosidicus gigas that were collected off the coast of Peru. We report the first evidence of large inter-individual differences in jumbo squid foraging strategies with no systematic increase of trophic level with size. Overall, gladius δ(13C values indicated one or several migrations through the squid's lifetime (∼8-9 months, during which δ(15N values also fluctuated (range: 1 to 5‰. One individual showed an unexpected terminal 4.6‰ δ(15N decrease (more than one trophic level, thus indicating a shift from higher- to lower-trophic level prey at that time. The data illustrate the high diversity of prey types and foraging histories of this species at the individual level. CONCLUSIONS/SIGNIFICANCE: The isotopic signature of gladii proved to be a powerful tool to depict high resolution and ontogenic variations in individual foraging strategies of squids, thus complementing traditional information offered by stomach content analysis and stable isotopes on metabolically active tissues. The observed differences in life history strategies highlight the high degree of plasticity of the jumbo squid and its high potential to adapt to environmental changes.

  3. Foraging ecology and movement patterns of jumbo squid (Dosidicus gigas) in the California Current System

    Science.gov (United States)

    Field, John C.; Elliger, Carl; Baltz, Ken; Gillespie, Graham E.; Gilly, William F.; Ruiz-Cooley, R. I.; Pearse, Devon; Stewart, Julia S.; Matsubu, William; Walker, William A.

    2013-10-01

    From 2002 to 2010, the jumbo squid (Dosidicus gigas) has been regularly encountered in large numbers throughout the California Current System (CCS). This species, usually found in subtropical waters, could affect coastal pelagic ecosystems and fisheries as both predator and prey. Neither the abundance of jumbo squid nor the optimal ocean conditions in which they flourish are well known. To understand better the potential impacts of this species on both commercial fisheries and on food-web structure we collected nearly 900 specimens from waters of the CCS, covering over 20° of latitude, over a range of depths and seasons. We used demographic information (size, sex, and maturity state) and analyzed stomach contents using morphological and molecular methods to best understand the foraging ecology of this species in different habitats of the CCS. Squid were found to consume a broad array of prey. Prey in offshore waters generally reflected the forage base reported in previous studies (mainly mesopelagic fishes and squids), whereas in more coastal waters (shelf, shelf break and slope habitats) squid foraged on a much broader mix that included substantial numbers of coastal pelagic fishes (Pacific herring and northern anchovy, as well as osmerids and salmonids in northern waters) and groundfish (Pacific hake, several species of rockfish and flatfish). We propose a seasonal movement pattern, based on size and maturity distributions along with qualitative patterns of presence or absence, and discuss the relevance of both the movement and distribution of jumbo squid over space and time. We find that jumbo squid are a generalist predator, which feeds primarily on small, pelagic or mesopelagic micronekton but also on larger fishes when they are available. We also conclude that interactions with and potential impacts on ecosystems likely vary over space and time, in response to both seasonal movement patterns and highly variable year-to-year abundance of the squid themselves.

  4. Disruption of amylase genes by RNA interference affects reproduction in the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Huvet, Arnaud; Béguel, Jean-Philippe; Cavaleiro, Nathalia Pereira; Thomas, Yoann; Quillien, Virgile; Boudry, Pierre; Alunno-Bruscia, Marianne; Fabioux, Caroline

    2015-06-01

    Feeding strategies and digestive capacities can have important implications for variation in energetic pathways associated with ecological and economically important traits, such as growth or reproduction in bivalve species. Here, we investigated the role of amylase in the digestive processes of Crassostrea gigas, using in vivo RNA interference. This approach also allowed us to investigate the relationship between energy intake by feeding and gametogenesis in oysters. Double-stranded (ds)RNA designed to target the two α-amylase genes A and B was injected in vivo into the visceral mass of oysters at two doses. These treatments caused significant reductions in mean mRNA levels of the amylase genes: -50.7% and -59% mRNA A, and -71.9% and -70.6% mRNA B in 15 and 75 µg dsRNA-injected oysters, respectively, relative to controls. Interestingly, reproductive knock-down phenotypes were observed for both sexes at 48 days post-injection, with a significant reduction of the gonad area (-22.5% relative to controls) and germ cell under-proliferation revealed by histology. In response to the higher dose of dsRNA, we also observed reductions in amylase activity (-53%) and absorption efficiency (-5%). Based on these data, dynamic energy budget modeling showed that the limitation of energy intake by feeding that was induced by injection of amylase dsRNA was insufficient to affect gonadic development at the level observed in the present study. This finding suggests that other driving mechanisms, such as endogenous hormonal modulation, might significantly change energy allocation to reproduction, and increase the maintenance rate in oysters in response to dsRNA injection. PMID:25883379

  5. The shell organic matrix of the crossed lamellar queen conch shell (Strombus gigas).

    Science.gov (United States)

    Osuna-Mascaró, Antonio; Cruz-Bustos, Teresa; Benhamada, Sana; Guichard, Nathalie; Marie, Benjamin; Plasseraud, Laurent; Corneillat, Marion; Alcaraz, Gérard; Checa, Antonio; Marin, Frédéric

    2014-02-01

    In molluscs, the shell organic matrix comprises a large set of biomineral-occluded proteins, glycoproteins and polysaccharides that are secreted by the calcifying mantle epithelium, and are supposed to display several functions related to the synthesis of the shell. In the present paper, we have characterized biochemically the shell matrix associated to the crossed-lamellar structure of the giant queen conch Strombus gigas. The acid-soluble (ASM) and acid-insoluble (AIM) matrices represent an extremely minor fraction of the shell. Both are constituted of polydisperse and of few discrete proteins among which three fractions, obtained by preparative SDS-PAGE and named 1P3, 2P3 and 3P3, are dominant and were further characterized. Compared to other matrices, the acid-soluble matrix is weakly glycosylated (3%) and among the discrete components, only 3P3 seems noticeably glycosylated. The monosaccharide composition of the ASM shows that mannose represents the main monosaccharide. To our knowledge, this is the first report of a high ratio of this sugar in a skeletal matrix. Furthermore, the ASM interacts with the in vitro crystallization of calcium carbonate, but this interaction is moderate. It differs from that of the isolated 1P3 fraction but is similar to that of the 2P3 and 3P3 fractions. At last, antibodies developed from the 3P3 fraction were used to localize this fraction within the shell by immunogold. This study is the first one aiming at characterizing the organic matrix associated to the crossed-lamellar structure of the queen conch shell. PMID:24291423

  6. Effects of mosquito control pesticides on competent queen conch (Strombus gigas) larvae.

    Science.gov (United States)

    Delgado, Gabriel A; Glazer, Robert A; Wetzel, Dana

    2013-10-01

    Pesticides are applied seasonally in the Florida Keys to control nuisance populations of mosquitoes that pose a health threat to humans. There is, however, a need to investigate the effects of these pesticides on non-target marine organisms. We tested naled and permethrin, two mosquito adulticides used in the Keys, on a critical early life-history stage of queen conch (Strombus gigas). We conducted 12-h exposure experiments on competent (i.e., capable of undergoing metamorphosis) queen conch larvae using environmentally relevant pesticide concentrations. We found that there was little to no mortality and that the pesticides did not induce or interfere with metamorphosis. However, after introduction of a natural metamorphic cue (extract of the red alga Laurencia potei), a significantly greater proportion of larvae underwent metamorphosis in the pesticide treatments than in those with the alga alone. In addition to the morphogenetic pathway that induces metamorphosis when stimulated, there thus appears to be a regulatory pathway that enhances the response to metamorphic triggers, as suggested by the increased sensitivity of the queen conch larvae to the algal cue after pesticide exposure (i.e., the pesticides stimulated the regulatory pathway). The regulatory pathway probably plays a role in the identification of high-quality habitat for metamorphosis, as the increased response to the algal cue suggests. Aerial drift and runoff can carry these pesticides into nearshore waters, where they may act as a false signal of favorable conditions and facilitate metamorphosis in suboptimal habitat, thus adversely affecting recruitment in nearshore queen conch populations. PMID:24243960

  7. Antioxidant deficit in gills of Pacific oyster (Crassostrea gigas) exposed to chlorodinitrobenzene increases menadione toxicity

    International Nuclear Information System (INIS)

    Disturbances in antioxidant defenses decrease cellular protection against oxidative stress and jeopardize cellular homeostasis. To knock down the antioxidant defenses of Pacific oyster Crassostrea gigas, animals were pre-treated with 1-chloro-2,4-dinitrobenzene (CDNB) and further challenged with pro-oxidant menadione (MEN). CDNB pre-treatment (10 μM for 18 h) was able to consume cellular thiols in gills, decreasing GSH (53%) and decrease protein thiols (25%). CDNB pre-treatment also disrupted glutathione reductase and thioredoxin reductase activity in the gills, but likewise strongly induced glutathione S-transferase activity (270% increase). Surprisingly, hemocyte viability was greatly affected 24 h after CDNB removal, indicating a possible vulnerability of the oyster immune system to electrophilic attack. New in vivo approaches were established, allowing the identification of higher rates of GSH–CDNB conjugate export to the seawater and enabling the measurement of the organic peroxide consumption rate. CDNB-induced impairment in antioxidant defenses decreased the peroxide removal rate from seawater. After showing that CDNB decreased gill antioxidant defenses and increased DNA damage in hemocytes, oysters were further challenged with 1 mM MEN over 24 h. MEN treatment did not affect thiol homeostasis in gills, while CDNB pre-treated animals recovered GSH and PSH to the control level after 24 h of depuration. Interestingly, MEN intensified GSH and PSH loss and mortality in CDNB-pre-treated animals, showing a clear synergistic effect. The superoxide-generating one-electron reduction of MEN was predominant in gills and may have contributed to MEN toxicity. These results support the idea that antioxidant-depleted animals are more susceptible to oxidative attack, which can compromise survival. Data also corroborate the idea that gills are an important detoxifying organ, able to dispose of organic peroxides, induce phase II enzymes, and efficiently export GSH

  8. Horseshoe crab, Tachypleus gigas (Müller, 1785) spawning population at Balok Beach, Kuantan, Pahang, Malaysia.

    Science.gov (United States)

    Tan, A N; Christianus, A; Shakibazadeh, S; Hajeb, P

    2012-07-01

    Local and regional decline of Asian horseshoe crabs has spurred a study on its spawning population at Balok Beach, Kuantan, Pahang, Malaysia. This location was identified as spawning site due to the occurrence of horseshoe crab spawning pairs and nests. Size-frequency, length-weight relationships, sex ratio and epibiont infestation of Tachypleus gigas were studied. Instar stage was estimated based on prosomal width. Condition of the horseshoe crab carapace was reported. Visual search technique of horseshoe crab was conducted during high tide of new and full moons. Prosomal, opisthosomal and telson length and weight of each horseshoe crab were measured. Largest female was recorded with mean prosomal length and width of 154.4 and 246.9 mm, respectively. About 69.8% of the males belonged to size group of 151-200 mm and 53.3% of females were grouped into 201-250 mm. All individuals were of fourteenth to sixteenth instar stages. Sex ratio varied from 0.313 to 2.5 and attributed to commercial harvest and monsoon season. Sand sediment of study site showed 93% of fine sands with grain size ranged from 120 to 250 microm. Acorn and pedunculate barnacle, conical and flat slipper shells were found on the carapace of the specimens. Most males had damaged eyes and carapaces while females with broken telsons. Body damages of about 19.9% on the specimens were likely due to nearby fishing activities. Lack of satellite male indicated low spawning population. The finding of this study showed that the species is extremely threatened by human activities and coastal development. PMID:24218930

  9. Transcriptional changes in Crassostrea gigas oyster spat following a parental exposure to the herbicide diuron.

    Science.gov (United States)

    Rondon, R; Akcha, F; Alonso, P; Menard, D; Rouxel, J; Montagnani, C; Mitta, G; Cosseau, C; Grunau, C

    2016-06-01

    The Pacific oyster Crassostrea gigas is the main oyster species produced in the world, and a key coastal economic resource in France. High mortalities affect Pacific oysters since 2008 in France and Europe. Their origins have been attributed to a combination of biotic and abiotic factors, underlining the importance of environment quality. The impact of water pollution has been pointed out and one of the pollutants, the genotoxic herbicide diuron, occurs at high concentrations all along the French coasts. Previous work has revealed that a parental exposure to diuron had a strong impact on hatching rates and offspring development even if spats were not exposed to diuron themselves. In this study, we explored for the first time the transcriptional changes occurring in oyster spats (non exposed) originating from genitors exposed to an environmentally relevant concentration of diuron during gametogenesis using the RNAseq methodology. We identified a transcriptomic remodeling revealing an effect of the herbicide. Different molecular pathways involved in energy production, translation and cell proliferation are particularly disturbed. This analysis revealed modulated candidate genes putatively involved in response to oxidative stress and mitochondrial damage in offspring of genitors exposed to diuron. Complementary measures of the activity of enzymes involved in these latter processes corroborate the results obtained at the transcriptomic level. In addition, our results suggested an increase in energy production and mitotic activity in 5-month-spats from diuron-exposed genitors. These results could correspond to a "catch-up growth" phenomenon allowing the spats from diuron-exposed genitors, which displayed a growth delay at 3 months, to gain a normal size when they reach the age of 6 months. These results indicate that exposure to a concentration of diuron that is frequently encountered in the field during the oyster's gametogenesis stage can impact the next generation

  10. Effect of carbonate chemistry alteration on the early embryonic development of the Pacific oyster (Crassostrea gigas.

    Directory of Open Access Journals (Sweden)

    Frédéric Gazeau

    Full Text Available Ocean acidification, due to anthropogenic CO₂ absorption by the ocean, may have profound impacts on marine biota. Calcareous organisms are expected to be particularly sensitive due to the decreasing availability of carbonate ions driven by decreasing pH levels. Recently, some studies focused on the early life stages of mollusks that are supposedly more sensitive to environmental disturbances than adult stages. Although these studies have shown decreased growth rates and increased proportions of abnormal development under low pH conditions, they did not allow attribution to pH induced changes in physiology or changes due to a decrease in aragonite saturation state. This study aims to assess the impact of several carbonate-system perturbations on the growth of Pacific oyster (Crassostrea gigas larvae during the first 3 days of development (until shelled D-veliger larvae. Seawater with five different chemistries was obtained by separately manipulating pH, total alkalinity and aragonite saturation state (calcium addition. Results showed that the developmental success and growth rates were not directly affected by changes in pH or aragonite saturation state but were highly correlated with the availability of carbonate ions. In contrast to previous studies, both developmental success into viable D-shaped larvae and growth rates were not significantly altered as long as carbonate ion concentrations were above aragonite saturation levels, but they strongly decreased below saturation levels. These results suggest that the mechanisms used by these organisms to regulate calcification rates are not efficient enough to compensate for the low availability of carbonate ions under corrosive conditions.

  11. Antioxidant deficit in gills of Pacific oyster (Crassostrea gigas) exposed to chlorodinitrobenzene increases menadione toxicity

    Energy Technology Data Exchange (ETDEWEB)

    Trevisan, Rafael; Arl, Miriam [Departamento de Bioquimica, Universidade Federal de Santa Catarina, 88040-900 Florianopolis, SC (Brazil); Sacchet, Cassia Lopes [Universidade do Oeste do Estado de Santa Catarina, 89600-000 Joacaba, SC (Brazil); Engel, Cristiano Severino; Danielli, Naissa Maria; Mello, Danielle Ferraz [Departamento de Bioquimica, Universidade Federal de Santa Catarina, 88040-900 Florianopolis, SC (Brazil); Brocardo, Caroline [Universidade do Oeste do Estado de Santa Catarina, 89600-000 Joacaba, SC (Brazil); Maris, Angelica Francesca [Departamento de Biologia Celular, Embriologia e Genetica, Universidade Federal de Santa Catarina, 88040-900 Florianopolis, SC (Brazil); Dafre, Alcir Luiz, E-mail: alcir@ccb.ufsc.br [Departamento de Bioquimica, Universidade Federal de Santa Catarina, 88040-900 Florianopolis, SC (Brazil)

    2012-02-15

    Disturbances in antioxidant defenses decrease cellular protection against oxidative stress and jeopardize cellular homeostasis. To knock down the antioxidant defenses of Pacific oyster Crassostrea gigas, animals were pre-treated with 1-chloro-2,4-dinitrobenzene (CDNB) and further challenged with pro-oxidant menadione (MEN). CDNB pre-treatment (10 {mu}M for 18 h) was able to consume cellular thiols in gills, decreasing GSH (53%) and decrease protein thiols (25%). CDNB pre-treatment also disrupted glutathione reductase and thioredoxin reductase activity in the gills, but likewise strongly induced glutathione S-transferase activity (270% increase). Surprisingly, hemocyte viability was greatly affected 24 h after CDNB removal, indicating a possible vulnerability of the oyster immune system to electrophilic attack. New in vivo approaches were established, allowing the identification of higher rates of GSH-CDNB conjugate export to the seawater and enabling the measurement of the organic peroxide consumption rate. CDNB-induced impairment in antioxidant defenses decreased the peroxide removal rate from seawater. After showing that CDNB decreased gill antioxidant defenses and increased DNA damage in hemocytes, oysters were further challenged with 1 mM MEN over 24 h. MEN treatment did not affect thiol homeostasis in gills, while CDNB pre-treated animals recovered GSH and PSH to the control level after 24 h of depuration. Interestingly, MEN intensified GSH and PSH loss and mortality in CDNB-pre-treated animals, showing a clear synergistic effect. The superoxide-generating one-electron reduction of MEN was predominant in gills and may have contributed to MEN toxicity. These results support the idea that antioxidant-depleted animals are more susceptible to oxidative attack, which can compromise survival. Data also corroborate the idea that gills are an important detoxifying organ, able to dispose of organic peroxides, induce phase II enzymes, and efficiently export GSH

  12. Metals and trace elements in giant garter snakes (Thamnophis gigas) from the Sacramento Valley, California, USA

    Science.gov (United States)

    Wylie, G.D.; Hothem, R.L.; Bergen, D.R.; Martin, L.L.; Taylor, R.J.; Brussee, B.E.

    2009-01-01

    The giant garter snake (GGS; Thamnophis gigas) is a federally listed threatened species endemic to wetlands of the Central Valley of California. Habitat destruction has been the main factor in the decline of GGS populations, but the effects of contaminants on this species are unknown. To contribute to the recovery of these snakes, the U.S. Geological Survey (USGS) began studies of the life history and habitat use of GGSs in 1995. During a series of investigations conducted from 1995 to the present, specimens of dead GGSs were opportunistically collected from the Colusa National Wildlife Refuge (CNWR), the Natomas Basin, and other sites in northern California. Whole snakes were stored frozen for potential future analysis. As funding became available, we analyzed tissues of 23 GGSs to determine the concentrations of total mercury (Hg) and other trace elements in livers and concentrations of Hg in brains and tail clips. Mercury concentrations (??g/g, wet weight) ranged from 0.08 to 1.64 in livers, 0.01 to 0.18 in brains, and 0.02 to 0.32 in tail clips. In livers, geometric mean concentrations (??g/g, dry weight) of arsenic (25.7) and chromium (1.02) were higher than most values from studies of other snakes. Mercury concentrations in tail clips were positively correlated with concentrations in livers and brains, with the most significant correlations occurring at the Natomas Basin and when Natomas and CNWR were combined. Results indicate the value of using tail clips as a nonlethal bioindicator of contaminant concentrations. ?? 2008 US Government.

  13. Cellular and Transcriptional Responses of Crassostrea gigas Hemocytes Exposed in Vitro to Brevetoxin (PbTx-2

    Directory of Open Access Journals (Sweden)

    Alcir Luiz Dafre

    2012-03-01

    Full Text Available Hemocytes mediate a series of immune reactions essential for bivalve survival in the environment, however, the impact of harmful algal species and their associated phycotoxins upon bivalve immune system is under debate. To better understand the possible toxic effects of these toxins, Crassostrea gigas hemocytes were exposed to brevetoxin (PbTx-2. Hemocyte viability, monitored through the neutral red retention and MTT reduction assays, and apoptosis (Hoechst staining remained unchanged during 12 h of exposure to PbTx-2 in concentrations up to 1000 µg/L. Despite cell viability and apoptosis remained stable, hemocytes incubated for 4 h with 1000 µg/L of PbTx-2 revealed higher expression levels of Hsp70 (p < 0.01 and CYP356A1 ( p < 0.05 transcripts and a tendency to increase FABP expression, as evaluated by Real-Time quantitative PCR. The expression of other studied genes (BPI, IL-17, GSTO, EcSOD, Prx6, SOD and GPx remained unchanged. The results suggest that the absence of cytotoxic effects of PbTx-2 in Crassostrea gigas hemocytes, even at high concentrations, allow early defense responses to be produced by activating protective mechanisms associated to detoxification (CYP356A1 and possibly FABP and stress (Hsp70, but not to immune or to antioxidant (BPI, IL-17, EcSOD, Prx6, GPx and SOD related genes.

  14. Combined effects of pollutants and salinity on embryo-larval development of the Pacific oyster, Crassostrea gigas.

    Science.gov (United States)

    Gamain, Perrine; Gonzalez, Patrice; Cachot, Jérôme; Pardon, Patrick; Tapie, Nathalie; Gourves, Pierre Yves; Budzinski, Hélène; Morin, Bénédicte

    2016-02-01

    For several years, low larval recruitment has been observed in Arcachon Bay, in southwest France. Exposure to pollutants could partly account for the reduction of early life stages of the Pacific oyster. This study evaluated the effects of copper and S-metolachlor in combination with salinity on the early life stages of Crassostrea gigas. Embryos were exposed to concentrations of copper (1, 10 and 50 μg L(-1)) or S-metolachlor (10, 100 and 1000 ng L(-1)) and six salinities (18, 21, 24, 27, 30 and 33 u.s.i). Embryotoxicity was measured by considering both the percentage of abnormalities and arrested development in D-shaped larvae. Embryo-larval development was only affected at salinities ≤24 u.s.i, which have never been observed during C. gigas reproduction period in Arcachon Bay. Both contaminants had an effect at environmental concentrations. Our results suggest that copper and metolachlor toxicity was enhanced with decreasing salinity. PMID:26583531

  15. In vivo RNA interference of a gonad-specific transforming growth factor-β in the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Huvet, Arnaud; Fleury, Elodie; Corporeau, Charlotte; Quillien, Virgile; Daniel, Jean Yves; Riviere, Guillaume; Boudry, Pierre; Fabioux, Caroline

    2012-08-01

    We investigated the role of oyster gonadal TGFβ (og-TGFβ) in the reproduction of Crassostrea gigas, using an in vivo RNA interference approach. We designed double-stranded RNA targeting og-TGFβ, which is specifically expressed in the somatic cells surrounding germ cells in the gonad of both male and female oysters. In vivo injection of this og-TGFβ dsRNA into the gonad led to knock-down phenotypes for both sexes, with significant reduction (77.52% relative to controls) of the gonad area, lowered reproductive effort and germ cell under-proliferation. Interestingly, half of the injected females halted their vitellogenesis, since we were only able to observe pre-vitellogenic oocytes. In addition, apoptotic germ cells and haemocytes infiltrated into the gonad, likely as part of the active resorption of degenerating germ cells. Conversely, males showed a normal phenotype at the cellular level, with spermatids and spermatozoids observed in the gonads of control and injected males. As a result, og-TGFβ appears to play an essential role in C. gigas germ cell development by functioning as an activator of germ cell proliferation in both male and female oysters and vitellogenesis in females. PMID:22147255

  16. Rising water temperatures, reproduction and recruitment of an invasive oyster, Crassostrea gigas, on the French Atlantic coast.

    Science.gov (United States)

    Dutertre, Mickaël; Beninger, Peter G; Barillé, Laurent; Papin, Mathias; Haure, Joël

    2010-02-01

    The recent appearance and invasion of feral oysters (Crassostrea gigas) along the northern European Atlantic coast, underscores the necessity to investigate the relationship between environmental variables, reproductive physiology, larval development and recruitment. We studied these relationships at both high (HT) and intermediate (IT) - turbidity sites, through historical data on water temperatures, multi-parameter environmental probes, histological analyses, and field collections of planktonic larvae and settled post-larvae in 2005 and 2006. A progressive warming trend was observed, especially since 1995, when oyster proliferation first became severe. Threshold temperatures for oocyte growth, larval development and settlement were achieved in both 2005 and 2006. The HT site showed greater numbers of larvae and post-larvae than the IT site for both years, with the highest numbers of post-larvae observed at both sites during the warmer summer of 2006. These results suggest that increased temperatures in northern European waters allow successful reproduction, larval development, and recruitment of C. gigas. High turbidity conditions further enhance this success. PMID:19682738

  17. Chromogenic behaviors of the Humboldt squid (Dosidicus gigas) studied in situ with an animal-borne video package.

    Science.gov (United States)

    Rosen, Hannah; Gilly, William; Bell, Lauren; Abernathy, Kyler; Marshall, Greg

    2015-01-15

    Dosidicus gigas (Humboldt or jumbo flying squid) is an economically and ecologically influential species, yet little is known about its natural behaviors because of difficulties in studying this active predator in its oceanic environment. By using an animal-borne video package, National Geographic's Crittercam, we were able to observe natural behaviors in free-swimming D. gigas in the Gulf of California with a focus on color-generating (chromogenic) behaviors. We documented two dynamic displays without artificial lighting at depths of up to 70 m. One dynamic pattern, termed 'flashing' is characterized by a global oscillation (2-4 Hz) of body color between white and red. Flashing was almost always observed when other squid were visible in the video frame, and this behavior presumably represents intraspecific signaling. Amplitude and frequency of flashing can be modulated, and the phase relationship with another squid can also be rapidly altered. Another dynamic display termed 'flickering' was observed whenever flashing was not occurring. This behavior is characterized by irregular wave-like activity in neighboring patches of chromatophores, and the resulting patterns mimic reflections of down-welled light in the water column, suggesting that this behavior may provide a dynamic type of camouflage. Rapid and global pauses in flickering, often before a flashing episode, indicate that flickering is under inhibitory neural control. Although flashing and flickering have not been described in other squid, functional similarities are evident with other species. PMID:25609785

  18. Controlled and in situ target strengths of the jumbo squid Dosidicus gigas and identification of potential acoustic scattering sources.

    Science.gov (United States)

    Benoit-Bird, Kelly J; Gilly, William F; Au, Whitlow W L; Mate, Bruce

    2008-03-01

    This study presents the first target strength measurements of Dosidicus gigas, a large squid that is a key predator, a significant prey, and the target of an important fishery. Target strength of live, tethered squid was related to mantle length with values standardized to the length squared of -62.0, -67.4, -67.9, and -67.6 dB at 38, 70, 120, and 200 kHz, respectively. There were relatively small differences in target strength between dorsal and anterior aspects and none between live and freshly dead squid. Potential scattering mechanisms in squid have been long debated. Here, the reproductive organs had little effect on squid target strength. These data support the hypothesis that the pen may be an important source of squid acoustic scattering. The beak, eyes, and arms, probably via the sucker rings, also play a role in acoustic scattering though their effects were small and frequency specific. An unexpected source of scattering was the cranium of the squid which provided a target strength nearly as high as that of the entire squid though the mechanism remains unclear. Our in situ measurements of the target strength of free-swimming squid support the use of the values presented here in D. gigas assessment studies. PMID:18345820

  19. [Genetic diversity in two populations of the snail Strombus gigas (Gastropoda: Strombidae) from Yucatan, Mexico, using microsatellite].

    Science.gov (United States)

    Zamora-Bustillos, Roberto; Rodríguez-Canul, Rossanna; García de León, Francisco J; Tello Cetina, Jorge

    2011-09-01

    The pink conch Strombus gigas is an important fisheries resource in the Caribbean region, including the Yucatán Peninsula. We analyzed the genetic diversity and genetic structure of two populations (Alacranes Reef and Chinchorro Bank) with the use of five microsatellite molecular markers. The results indicate that the two populations are in the same rank of genetic diversity (He), from 0.613 to 0.692. Significant deviation from H-WE was observed in the both populations due to deficit to heterozygotes, this was attributed to inbreeding as a consequence of over-fishing; nevertheless, other possible causes considered are mixing of individuals from two or more populations, and the existence of null alleles. Levels of genetic differentiation indicated the existence of a single homogenous population in the Yucatan Peninsula (F(ST) de 0.003, p = 0.49), which fits with highest levels of gene flow is significant (2.3 individuals) between both populations. Results from this study support the hypothesis that S. gigas is part of a single panmictic population in the Yucatan Peninsula; therefore, this fishery resource should be regulated the same way for both areas. PMID:22017119

  20. Cytochemical investigation of the digestive gland of two strombidae species (Strombus gigas and Strombus pugilis) in relation to the nutrition.

    Science.gov (United States)

    Volland, Jean-Marie; Gros, Olivier

    2012-10-01

    Strombus gigas and Strombus pugilis are threatened species and aquaculture represents a good alternative solution to the fishing. In this study, we highlighted the intracellular digestion process in the digestive gland of two Strombidae species, S. gigas and Strombuspugilis, by the cytochemical characterization of two lysosomal enzymes: acid phosphatase and arylsulfatase. In order to check the efficiency of artificial food digestion, we conducted the characterization on freshly collected, starved and artificially fed individuals of S. pugilis. TEM observations of digestive gland sections from freshly collected individuals of both species revealed the presence of acid phosphatase and arylsulfatase activity mostly located in the apical third of digestive cells. Both enzymes were also detected in artificially fed individuals. In response to the starvation, acid phosphatase is not produced anymore by digestive cells, while arylsulfatase is still present. To our knowledge, this is the first cytochemical validation of intracellular digestion of artificial food in Strombidae. This study highlights the intracellular digestion of artificial food developed for Strombidae aquaculture. Moreover, we have shown that the lysosomal activity could be used as a feed index. PMID:22628255

  1. Causes and effects of a highly successful marine invasion : Case-study of the introduced Pacific oyster Crassostrea gigas in continental NW European estuaries

    NARCIS (Netherlands)

    Troost, Karin

    2010-01-01

    Since the 1960's, the Pacific oyster Crassostrea gigas has been introduced for mariculture at several locations within NW Europe. The oyster established itself everywhere and expanded rapidly throughout the receiving ecosystems, forming extensive and dense reef structures. It became clear that the P

  2. Causes and effects of a highly successful marine invasion: Case-study of the introduced Pacific oyster Crassostrea gigas in continental NW European estuaries

    NARCIS (Netherlands)

    Troost, K.

    2010-01-01

    Since the 1960's, the Pacific oyster Crassostrea gigas has been introduced for mariculture at several locations within NW Europe. The oyster established itself everywhere and expanded rapidly throughout the receiving ecosystems, forming extensive and dense reef structures. It became clear that the P

  3. 杨圆蚧天敌昆虫的初步研究%On Natural Enemy of Quadraspidiotus gigas Thiem et Gerneck

    Institute of Scientific and Technical Information of China (English)

    孙岩; 李峰; 刘仲仁; 连月英; 刘婷婷

    2001-01-01

    本文记述了杨圆蚧(Quadraspidiotus gigas Thiem et Gerneck)的天敌昆虫种类,并对其生活习性进行了初步观察,对其利用价值进行了分析,对天敌的利用途径进行了探索.

  4. Antibacterial effects of mixtures of extracts of usnea, thyme and angelica obtained using different technological processes against certain types of bacteria of importance in veterinary medicine

    Directory of Open Access Journals (Sweden)

    Mišić Dušan

    2010-01-01

    Full Text Available Antibacterial effects of plant extracts were examined using mixtures of extracts obtained using different technological processes: usnea extract was obtained using the process of supercritical extraction (NKE, angelica extract was obtained through supercritical extraction processes (NKE and ultrasound extraction using ethanol (UZ, and thyme extract was obtained using the process of hydrodistillation (HD. Mixtures of the listed extracts were examined in various ratios: U (NKE and T (HD in a ratio of 1:1, U (NKE and T (HD in a ratio of 7:3, U (NKE, T (HD and A (NKE in a ratio of 2:2:1, and U (NKE, T (HD and A (UZ in a ratio of 2:2:1. The investigations covered 15 strains of bacteria of the genus Staphylococcus, Streptococcus and Enterococus, including the strains MRSA, VRE as well as reference strains of S. pyogenes ATCC 19615, S. agalactiae ATCC 27959 and S. aureus ATCC 11632. The antibacterial action of mixes of plant extracts was examined using the microdilution method in bouillon, and the examined mix concentrations were from 1.25 g/mL to 1280 g/mL. The strongest antibacterial effect was exhibited by mixes of usnea (NKE and thyme (HD in ratios of 1:1 and 7:3 with obtained MIC values from 5 g/mL to 160 g/mL, but the MIC value of the listed mixtures for the biggest number of strains amounted to 40 g/mL. A somewhat weaker effect was exhibited by the other examined extract mixtures with obtained MIC values of 10 g/mL to 320 g/mL. Based on the obtained MIC values and the results of previous investigations, it can be concluded that the examined mixtures of plant extracts exhibited a very strong antibacterial effect on the examined bacteria strains. .

  5. Modelling growth and reproduction of the Pacific oyster Crassostrea gigas: Advances in the oyster-DEB model through application to a coastal pond

    Science.gov (United States)

    Bourlès, Y.; Alunno-Bruscia, M.; Pouvreau, S.; Tollu, G.; Leguay, D.; Arnaud, C.; Goulletquer, P.; Kooijman, S. A. L. M.

    2009-08-01

    A bio-energetic model, based on the DEB theory exists for the Pacific oyster Crassostrea gigas. Pouvreau et al. [Pouvreau, S., Bourles, Y., Lefebvre, S., Gangnery, A., Alunno-Bruscia, M., 2006. Application of a dynamic energy budget model to the Pacific oyster, C. gigas, reared under various environmental conditions. J. Sea Res. 56, 156-167.] successfully applied this model to oysters reared in three environments with no tide and low turbidity, using chlorophyll a concentration as food quantifier. However, the robustness of the oyster-DEB model needs to be validated in varying environments where different food quantifiers reflect the food available for oysters, as is the case in estuaries and most coastal ecosystems. We therefore tested the oyster-DEB model on C. gigas reared in an Atlantic coastal pond from January 2006 to January 2007. The model relies on two forcing variables: seawater temperature and food density monitored through various food quantifiers. Based on the high temperature range measured in this oyster pond (3-30 °C), new boundary values of the temperature tolerance range were estimated both for ingestion and respiration rates. Several food quantifiers were then tested to select the most suitable for explaining the observed growth and reproduction of C. gigas reared in an oyster pond. These were: particulate organic matter and carbon, chlorophyll a concentration and phytoplankton enumeration (expressed in cell number per litre or in cumulative cell biovolume). We conclude that when phytoplankton enumeration was used as food quantifier, the new version of oyster-DEB model presented here reproduced the growth and reproduction of C. gigas very accurately. The next step will be to validate the model under contrasting coastal environmental conditions so as to confirm the accuracy of phytoplankton enumeration as a way of representing the available food that sustains oyster growth.

  6. 茶麸对不同螺龄福寿螺的毒杀试验%Efficacy of Tea Bran on Controlling Ampullaria gigas with Different Ages

    Institute of Scientific and Technical Information of China (English)

    温华良; 冯伟明; 刘惠珍; 田瑞钧; 郝东川

    2013-01-01

    In the paper, we found that tea bran technical material (TC), chalcanthite TC and agricultural ammonium bicarbonate could kill certain Ampullaria gigas, and tea bran had best control effect, with the death rate of fifteen days' A. gigas of 76.7% 24 hours after using the tea bran TC, while the death rate reached to 100% after using the pesticide 48 hours. Chalcanthite TC had better control effect, and the death rate was 40.3%24 hours after using chalcanthite TC, while the death rate reached to 100% 24 hours later. Agricultural ammonium bicarbonate could kill certain younger A. gigas, and the death rate of six days' A. gigas was 100% 48 hours after using the pesticide, but it had worse control effect on older A. gigas.%  茶麸原药、五水硫酸铜原药、农用碳酸氢铵对福寿螺都有一定的毒杀作用,其中茶麸原药对福寿螺的防效最佳,药后24 h,15 d螺龄的福寿螺的死亡率高达76.7%,药后48 h防效达100%;五水硫酸铜原药防效次之,药后24 h,防效达40.3%,药后48 h也表现出良好防效,达100%;而农用碳酸氢铵对低龄螺呈现出一定的防效,在药后48 h对6 d螺龄的防效达100%,但对25 d以上的高龄螺防效则较差.

  7. Comparative Identification of Angelicae Pubescentis Radix and Its Adulterants-Roots of Heracleum Hemsleyanum Diels and Roots of Heracleum Moellendorffii Hance%独活与混淆品牛尾独活、短毛独活的鉴别

    Institute of Scientific and Technical Information of China (English)

    周燕; 金佩芬; 赵宇炯

    2013-01-01

    目的 鉴别独活与混淆品牛尾独活、短毛独活.方法 采用性状、显微、薄层色谱法及液相色谱法鉴别.结果 独活与混淆品牛尾独活、短毛独活的性状、显微特征、薄层色谱、液相色谱均有差异.结论 本实验提供的鉴别方法,能准确地把独活与牛尾独活、短毛独活予以区别.%OBJECTIVE To identify Angelicae Pubescentis Radix and its adulterants-roots of Heracleum hemsleyanum Diels and roots of Heracleum moellendorffii Hance.METHODS Description,microscope,TLC and HPLC were used.RESULTS There were some differences between Angelicae Pubescentis Radix and its adulterants-roots of Heracleum hemsleyanum Diels and roots of Heracleum moellendorffii Hance in histological,morphological characters and physicochemical Properties.CONCLUSION This experiment provides the method for identification which can accurately distinguish Angelicaepubescentis Radix and its adulterants-roots ofHeracleum hemsleyanum Diels and roots of Heracleum moellendorffii Hance.

  8. Cultivo de la ostra Crassostrea gigas (Thunberg, 1795 en un vivero artesanal, La arena, Casma

    Directory of Open Access Journals (Sweden)

    Paul Baltazar

    2014-06-01

    Full Text Available El presente trabajo describe la metodología empleada para el cultivo de la ostra del Pacífico Crassostrea gigas en un vivero artesanal, en el Centro Acuícola La Arena, Casma. Se utilizó reproductores en fase intermedia de madurez gonádica procedentes de líneas de cultivo del Centro Acuícola. El acondicionamiento se realizó en tanques de fibra de vidrio de 1000 L, con agua de mar sin filtrar a una temperatura de 27 ± 0,9 oC; adicionalmente se les alimentó con fécula de maíz y microalgas obtenidas en el lugar y cultivadas al aire libre. El desove se indujo para un grupo sólo por estimulación térmica (30 a 31 oC y para el otro se añadió además peróxido de hidrógeno, a lo cual se presentaron respuestas diferentes. A los 20 minutos después de la fertilización se observó, en el 100% de huevos fecundados, el cuerpo polar definido y a las 24 horas las larvas veliger. Las larvas alcanzaron el estado de pediveliger luego de 20 días de cultivo, con tallas promedios de 237 ± 10 µm. Para la fijación de las larvas se utilizó conchuela molida (300 µm, plástico negro lijado y valvas de ostras. A los 33 días se obtuvieron semillas con tallas medias de 1262 ± 204 µm las que fueron colocadas en pearl net para su desarrollo en el mar. A los 30 días de la siembra en el mar, la talla promedio de las postlarvas alcanzó los 13,4 ± 3,4 mm. El trabajo muestra las ventajas de la metodología descrita en la producción masiva de semillas en un vivero artesanal.

  9. The immunological capacity in the larvae of Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Song, Xiaorui; Wang, Hao; Xin, Lusheng; Xu, Jiachao; Jia, Zhihao; Wang, Lingling; Song, Linsheng

    2016-02-01

    As the immune system has not fully developed during early developmental stages, bivalve larvae are more susceptible for pathogens, which frequently leads to the significant mortality in hatcheries. In the present study, the development of immune system and its response against bacteria challenge were investigated in order to characterize the repertoire of immunological capacity of Pacific oyster Crassostrea gigas during the ontogenesis. The phagocytosis was firstly observed in the early D-veliger larvae (17 hpf), especially in their velum site, which indicated the appearance of functional hemocytes during early D-veliger larvae stage. The whole-mount immunofluorescence assay of three pattern recognition receptors (integrin β-1, caspase-3 and C-type lectin 3) and one immune effector gene (IL17-5) was performed in blastula, early D-veliger and umbo larvae, suggested that velum and digestive gland were the potential sites of immune system in the larvae. The lowest activities of antioxidant enzymes (superoxide dismutase and catalase) and hydrolytic enzyme (lysozyme), as well as descended expression levels of 12 immune genes at the transition between embryogenesis and planktonic, indicated that the larvae at hatching (9 hpf) were in hypo-immunity. While the ascending activities of enzymes and expression levels of seven immune genes during the trochophore stage (15 hpf) suggested the initiation of immune system. The steadily increasing trend of all the 12 candidate genes at the early umbo larvae (120 h) hinted that the immune system was well developed at this stage. After bacterial challenge, some immune recognition (TLR4) and immune effector (IL17-5 and defh2) genes were activated in blastula stage (4 hpf), and other immune genes were up regulated in D-veliger larvae, indicating that the zygotic immune system could respond earlier against the bacterial challenge during its development. These results indicated that the cellular and humoral immune components

  10. Giga-LES of Hector the Convector keeping the tallest updrafts undiluted

    Science.gov (United States)

    Dauhut, Thibaut; Chaboureau, Jean-Pierre; Escobar, Juan; Mascart, Patrick

    2015-04-01

    The trend of stratospheric water vapour during the past decades is not correctly reproduced by current GCMs. This may be due to lack of representation of rapid water transfers from troposphere to stratosphere. Our modeling study focused on a particular case of tropical very deep convection which takes an active part in this transport. We aimed at understanding its dynamics and the stratosphere moistening processes. We selected a Hector thunderstorm observed on 30 November 2005 over Tiwi Islands, Australia, during the SCOUT-O3 field campaign. Plumes of ice particles reaching 19 km altitude were measured by lidar aboard the Geophysica stratospheric aircraft. We performed a Giga Large-Eddy Simulation of Hector (100 m horizontal resolution, more than 1 billion grid points) using cutting-edge computing resources, as well as a series of simulations with coarser and coarser horizontal resolutions, from 200 m to 1600 m. A strong morning sea breeze deviated boundary layer westerlies and led to intense convergence of humid air over Tiwi Islands. Deep convection triggered around 12:15 pm and quickly reached 14 km altitude. The associated cold pools organised and generated upward motions at the surface. The most intense upward transport started 1 hour later and lasted around 2 hours. As a result, a couple of updrafts overshot the tropopause carrying ice crystals in the stratosphere. Part of the ice particles precipitated then whereas the remainder sublimated in the lower stratosphere. The consequent vapour pockets were transported and diluted within the stratosphere by easterlies. While moistening appeared to be robust with respect to the grid spacing used, grid spacing on the order of 100 m may be necessary for a reliable estimate of hydration (Dauhut et al. ASL 2014, doi: 10.1002/asl2.534). A comprehensive analysis of individual updrafts and their properties once sorted by their height has been carried out. The couple of updrafts that reach the stratosphere presents a higher

  11. Características bioquímicas e hematológicas do pirarucu Arapaima gigas Schinz, 1822 (Arapaimidae de cultivo semi-intensivo na Amazônia Biochemical and hematological characteristics of the pirarucu Arapaima gigas Schinz, 1822 (Arapaimidae from semi-intensive culture in the Amazon

    Directory of Open Access Journals (Sweden)

    Gustavo Valadares Fonseca Drumond

    2010-09-01

    Full Text Available O presente estudo comparou os níveis plasmáticos de glicose, proteínas totais, uréia, triglicerídeos e colesterol, a contagem de eritrócitos, leucócitos e trombócitos entre alevinos e juvenis de Arapaima gigas (Osteoglociformes, Arapaimidae de uma piscicultura semi-intensiva de Manaus, estado do Amazonas, Brasil. Os alevinos de A. gigas apresentaram níveis significativamente (p0,05 no número de trombócitos e leucócitos totais entre alevinos e juvenis. Os juvenis de A. gigas apresentaram menor quantidade de linfócitos e maior quantidade de monócitos, neutrófilos e eosinófilos, quando comparados aos alevinos. Em estudos futuros, espécimes de A. gigas com outras idades também deverão ser comparados para melhor entendimento dos efeitos da idade neste peixe amazônico, pois estas informações, além de possibilitarem uma melhor compreensão da fisiologia desta espécie, poderão auxiliar no estabelecimento de estratégias para seu manejo.The present study compared the biochemical and hematological parameters of fingerlings and juveniles Arapaima gigas (Osteoglociformes, Arapaimidae from a semi-intensive fish farming in Manaus, Amazon State, Brazil. Fingerlings A. gigas had lower levels of total protein, triglycerides, urea and mean cell volume (MCV, but higher (p0.05 in the total thrombocytes and total white blood cell counts between fingerlings and juveniles. Juveniles A. gigas presented lower lymphocytes number and higher monocytes, neutrophils and eosinophils number when compared to the fingerlings. In further studies, A. gigas specimens with other ages should also be compared for a better understanding of the ontogenic development in this Amazon fish, because this information besides increase the knowledge of the physiology of this species, can aid in the establishment of strategies for its adequate handling.

  12. The raised coral reef complex of the Kenyan coast: Tridacna gigas U-series dates and geological implications

    Science.gov (United States)

    Accordi, Giovanni; Brilli, Mauro; Carbone, Federico; Voltaggio, Mario

    2010-08-01

    The Kenyan coast is characterized by a raised fossil reef complex cut by a series of morphological terraces. Shallow subtidal coralgal facies containing Tridacna gigas shells are found at different heights along the coast. Alpha-spectrometric U-series methods were applied to 18 T. gigas samples from different locations along this reef complex with an elevation range from 0 to 15 m above present sea level to obtain chronological information. Apparent U-Th ages, based on the assumption of closed system behaviour, correspond to early marine isotope stage (MIS) 5 ( n = 17) and MIS 7 ( n = 1). However, initial 234U/ 238U activity ratios exhibit a wide range, in many cases much greater than present seawater, which is likely to be associated with diagenetic alteration and migration of U-series isotopes. For this reason, we attempted a form of open system isochron dating after separating the Tridacna samples into three different groups on the basis of current elevation and distribution along the coast. An 'isochron' age of 120 ± 4 ka (1 σ) was obtained for the higher elevation group, placed in the terraced central coastal area; another age, statistically undistinguishable from the previous one, of 118 ± 7 ka (1 σ) was obtained for the group confined along the northern coast. These two groups correspond to a transgressive-regressive cycle connected to the maximum sea level highstand during the MIS 5e. A third 'isochron' age of 100 ± 4 ka (1 σ) was obtained for the group confined along the southern coast, encompassing part of the isotopic substages MIS 5c and d. Based on these data, and on the ecology of T. gigas whose optimal present-day depth range can be considered of 3-10 m below sea level, a maximum tectonic coastal uplift rate of between, respectively, 0.12 and 0.18 mm a -1 was calculated for the period since formation of these shells, and then the paleobathymetry of Tridacna facies has been inferred.

  13. Crecimiento del ostión Crassostrea gigas (Thunberg, 1795 cultivado en el estero La Piedra, Sinaloa, México

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    A. M. Góngora-Gómez

    2012-01-01

    Full Text Available Se realizó un ciclo de engorda (noviembre 2004- mayo 2005 con el ostión Crassostrea gigas en el estero La Piedra, Guasave (Sinaloa, México, usando canastas suspendidas en una línea madre para evaluar su crecimiento y supervivencia. Se utilizaron 10,000 semillas (3.5 ± 0.5 mm de altura inicial. Los valores promedios de los parámetros del agua fueron: temperatura, 22.2 ± 3.2°C; oxígeno disuelto, 6.8 ± 2.3 mg/l; y salinidad, 32.8 ± 3.14 ups; mientras que el promedio de la concentración de clorofila a fue de 3.2 ± 0.8 mg/m3. Los animales mostraron un crecimiento de 0.26 mm/día para la altura de su concha y 0.42 g/día de peso corporal. El índice de condición mostró un ligero descenso en el último mes de cultivo de 9.54 a 8.68. La fórmula: Peso = -15.4352 + 0.7968 Altura (r2 = 88.29; = 12.88; F = 37,71; P = 0.0017 describe la relación entre el peso y la altura de C. gigas en el cultivo. Se obtuvieron diferencias significativas entre el peso e índice de condición (P = 0.0023. Se registró una mortalidad total de 12%. Los resultados obtenidos indican que la temporada otoño-pri-mavera es favorable para el cultivo del ostión del Pacífico C. gigas en el estero La Piedra, Guasave, Sinaloa, ya que alcanzó la talla comercial (109.8 mm y 88.7 g en siete meses de cultivo.

  14. Utilisation des protozoaires ciliés (Paramecium africanum, Colpidium uncinatum, Neobursaridium gigas) pour l'épuration bactériologique des eaux polluées en microcosme

    OpenAIRE

    Nguedji, JBT.; Zébazé, SH.; Kemka, N.; Foto, SM.; Njiné, T.; Nola, M.; Bouetou, TB.

    2003-01-01

    An Microcosm Use of Ciliate Protozoa (Paramecium africanum, Colpidium uncinatum, Neobursaridium gigas) for Bacterial Purification of Polluted Water. Tests on the grazing of ciliated protozoa Paramecium africanum, Colpidium uncinatum and Neobursaridium gigas on the bacteria Escherichia coli and Staphylococcus sp. were carried out in an microcosm aquatic environment. These tests aimed at assessment of the role of these predators protozoa in the bacterial purification of polluted water. The evol...

  15. A conceptual model for site-level ecology of the giant gartersnake (Thamnophis gigas) in the Sacramento Valley, California

    Science.gov (United States)

    Halstead, Brian J.; Wylie, Glenn D.; Casazza, Michael L.; Hansen, Eric C.; Scherer, Rick D.; Patterson, Laura C.

    2015-01-01

    Giant gartersnakes (Thamnophis gigas) comprise a species of semi-aquatic snakes precinctive to marshes in the Central Valley of California (Hansen and Brode, 1980; Rossman and others, 1996). Because more than 90 percent of their historical wetland habitat has been converted to other uses (Frayer and others, 1989; Garone, 2007), giant gartersnakes have been listed as threatened by the State of California (California Department of Fish and Game Commission , 1971) and the United States (U.S. Fish and Wildlife Service, 1993). Giant gartersnakes currently occur in a highly modified landscape, with most extant populations occurring in the rice - growing regions of the Sacramento Valley, especially near areas that historically were tule marsh habitat (Halstead and others, 2010, 2014).

  16. Analysis of the tenderisation of jumbo squid (Dosidicus gigas) meat by ultrasonic treatment using response surface methodology.

    Science.gov (United States)

    Hu, Yaqin; Yu, Hiaxia; Dong, Kaicheng; Yang, Shuibing; Ye, Xingqian; Chen, Shiguo

    2014-10-01

    Due to its unique structure, jumbo squid (Dosidicus gigas) meat is sensitive to heat treatment, which makes the traditional squid products taste tough and hard. This study aimed to tenderise jumbo squid meat through ultrasonic treatment. Response surface methodology (RSM) was used to predict the tenderising effect of various treatment conditions. According to the results of RSM, the optimal conditions appeared to be a power of 186.9 W, a frequency of 25.6 kHz, and a time of 30.8 min, and the predicted values of flexibility and firmness under these optimal conditions were 2.40 mm and 435.1 g, respectively. Protein degradation and a broken muscle fibre structure were observed through histological assay and SDS-PAGE, which suggests a satisfactory tenderisation effect. PMID:24799231

  17. Conformational changes in proteins recovered from jumbo squid (Dosidicus gigas) muscle through pH shift washing treatments.

    Science.gov (United States)

    Cortés-Ruiz, Juan A; Pacheco-Aguilar, Ramón; Ramírez-Suárez, Juan C; Lugo-Sánchez, Maria E; García-Orozco, Karina D; Sotelo-Mundo, Rogerio R; Peña-Ramos, Aida

    2016-04-01

    Conformational and thermal-rheological properties of acidic (APC) and neutral (NPC) protein concentrates were evaluated and compared to those of squid (Dosidicus gigas) muscle proteins (SM). Surface hydrophobicity, sulfhydryl status, secondary structure profile, differential scanning calorimetry and oscillatory dynamic rheology were used to evaluate the effect of treatments on protein properties. Acidic condition during the washing process (APC) promoted structural and conformational changes in the protein present in the concentrate produced. These changes were enhanced during the heat setting of the corresponding sol. Results demonstrate that washing squid muscle under the proposed acidic conditions is a feasible technological alternative for squid-based surimi production improving its yield and gel-forming ability. PMID:26593553

  18. Modulation of GdCl3 and Angelica Sinensis polysaccharides on differentially expressed genes in liver of hepatic immunological injury mice by cDNA microarray

    Institute of Scientific and Technical Information of China (English)

    Hong Ding; Gang-Gang Shi; Xin Yu; Jie-Ping Yu; Jie-An Huang

    2003-01-01

    AIM: To study the modulating effect of GdCl3 and Angelica Sinensis polysaccharides (ASP) on differentially expressed genes in liver of hepatic immunological mice by cDNA microarray.METHODS: Hepatic immunological injury was induced by lipopolysaccharide (LPS ip, 0.2 mg.kg-1) in bacillus calmetteguerin (BCG ip, 1 mg.kg-1) primed mice; A single dose of 20 mg.kg-1 GdCl3 was simultaneously pretreated and 30 mg.kg-1 ASP (ig, qd×7 d) was administrated when the BCG+LPS was primed. The mice were sacrificed at the end of the 7th day after ip LPS for 6 h and the liver was removed quickly. The PCR products of 512 genes were spotted onto a chemical material-coated glass plate in array. The DNAs were fixed to the glass plate after series of treatments. The total RNAs were isolated from the liver tissue, and were purified to mRNAs by Oligotex.Both mRNAs from the normal liver tissue and the liver tissue from the mice with hepatic immunological injury or that pretreated with GdCl3 or ASP were reversely transcribed to cDNAs with the incorporation of fluorescent dUTP to prepare the hybridization probes. The mixed probes were hybridized to the cDNA microarray. After highstringent washing, the cDNA microarray was scanned for fluorescent signals and showed differences between the two tissues.RESULTS: Among the 512 target genes, 18 differed in liver tissue of hepatic immunological injury mice, and 6 differed in those pretreated by ASP, 7 differed in those pretreated by GdCl3.CONCLUSION: cDNA microarray technique is effective in screening the differentially expressed genes between two different kinds of tissue. Further analysis of those obtained genes will be helpful to understand the molecular mechanism of hepatic immunological injury and to study the intervention of drug. Both ASP and GdCl3 can decrease the number of the differentially expressed genes in liver tissue of mice with hepatic immunological injury.

  19. Whole transcriptome profiling of successful immune response to Vibrio infections in the oyster Crassostrea gigas by digital gene expression analysis.

    Directory of Open Access Journals (Sweden)

    Julien de Lorgeril

    Full Text Available The cultivated Pacific oyster Crassostrea gigas has suffered for decades large scale summer mortality phenomenon resulting from the interaction between the environment parameters, the oyster physiological and/or genetic status and the presence of pathogenic microorganisms including Vibrio species. To obtain a general picture of the molecular mechanisms implicated in C. gigas immune responsiveness to circumvent Vibrio infections, we have developed the first deep sequencing study of the transcriptome of hemocytes, the immunocompetent cells. Using Digital Gene Expression (DGE, we generated a transcript catalog of up-regulated genes from oysters surviving infection with virulent Vibrio strains (Vibrio splendidus LGP32 and V. aestuarianus LPi 02/41 compared to an avirulent one, V. tasmaniensis LMG 20012(T. For that an original experimental infection protocol was developed in which only animals that were able to survive infections were considered for the DGE approach. We report the identification of cellular and immune functions that characterize the oyster capability to survive pathogenic Vibrio infections. Functional annotations highlight genes related to signal transduction of immune response, cell adhesion and communication as well as cellular processes and defence mechanisms of phagocytosis, actin cytosqueleton reorganization, cell trafficking and autophagy, but also antioxidant and anti-apoptotic reactions. In addition, quantitative PCR analysis reveals the first identification of pathogen-specific signatures in oyster gene regulation, which opens the way for in depth molecular studies of oyster-pathogen interaction and pathogenesis. This work is a prerequisite for the identification of those physiological traits controlling oyster capacity to survive a Vibrio infection and, subsequently, for a better understanding of the phenomenon of summer mortality.

  20. Spatial variability in growth and reproduction of the Pacific oyster Crassostrea gigas (Thunberg, 1793) along the west European coast

    Science.gov (United States)

    Cardoso, Joana F. M. F.; Langlet, Denis; Loff, José F.; Martins, Ana R.; Witte, Johannes IJ.; Santos, Paulo T.; van der Veer, Henk W.

    2007-05-01

    The Pacific oyster Crassostrea gigas was introduced in Europe for commercial purposes in the mid 1960s. It was initially thought that low winter temperatures would restrain this species' reproduction and settlement; however, its present distribution in areas where no introduction has taken place suggests that natural invasion and expansion has occurred. Along the European coast, wild populations of Pacific oysters are already found from northern Germany to southern Portugal. Whether C. gigas will continue to further expand through northern waters will depend on its physiological performance. In this study, the performance of wild oyster populations has been studied in terms of growth and reproduction at three stations: La Rochelle (France; 46°N), Yerseke (Oosterschelde estuary, The Netherlands, 51°N), and Texel (Wadden Sea estuary, The Netherlands, 53°N). The French population had the lowest somatic-shell mass ratio and an increase in maximum shell length, somatic and gonadal mass was observed from France to the Netherlands. In addition, mean oocyte diameter decreased significantly from south to north. The combination of increasing gonadal mass and decreasing oocyte volume suggests an increasing reproductive output in terms of egg numbers from France to The Netherlands. Differences in temperature between locations will at least be partly responsible for the observed patterns; however, other environmental factors (such as food availability, predation pressure, sediment type and/or seston concentration) cannot be excluded. Since smaller eggs (oocytes) are thought to have a longer development time, the environmental conditions along the Dutch coast may result in increased larval dispersal and possibly in further population expansion.

  1. Jumbo squid (Dosidicus gigas) mantle collagen: extraction, characterization, and potential application in the preparation of chitosan-collagen biofilms.

    Science.gov (United States)

    Uriarte-Montoya, Mario Hiram; Arias-Moscoso, Joe Luis; Plascencia-Jatomea, Maribel; Santacruz-Ortega, Hisila; Rouzaud-Sández, Ofelia; Cardenas-Lopez, Jose Luis; Marquez-Rios, Enrique; Ezquerra-Brauer, Josafat Marina

    2010-06-01

    Collagen-based biomaterials have been widely used due to its binding capabilities. However the properties and potential use of new collagen sources are still under investigation. Fish by-products are an excellent source of collagen. Thus, acid-soluble collagen (ASC) was extracted, and biochemical and physicochemically characterized from one under-utilized specie, jumbo squid (Dosidicus gigas). In addition, commercial chitosan (95-50%)-ASC (5-50%) blend films were successfully prepared by casting, and characterized by infrared spectroscopy (FT-IR) and differential scanning calorimetry (DSC). The molecular masses of the ASC subunits were about 190kDa, 110kDa, and 97kDa, the content of proline and hydroxyproline was 10.9% and 2.8%, respectively. The FT-IR and nuclear magnetic resonance spectra ((1)H NMR) confirmed collagen peptidic crosslinks, and one endothermic peak was found at 119 degrees C. The FT-IR spectrum showed that chitosan and ASC remain linked into the films mainly due to hydrogen bonding. The 85:15 (chitosan:ASC) ratio was selected for its thermal and mechanical analyses. The thermograms of this film indicated the presence of two peaks, one at 87-98 degrees C and the other at 142-182 degrees C. The chitosan:ASC blend produced a transparent and brittle film, with high percentage of elongation at break, and low tensile strength in comparison to chitosan films. D. gigas mantle might be useful as a new source of plasticizer agent in the preparation of biofilms in composites with chitosan. PMID:20097560

  2. Utilising caging techniques to investigate metal assimilation in Nucella lapillus, Mytilus edulis and Crassostrea gigas at three Irish coastal locations

    Science.gov (United States)

    Giltrap, Michelle; Macken, Ailbhe; Davoren, Maria; McGovern, Evin; Foley, Barry; Larsen, Martin; White, Jonathan; McHugh, Brendan

    2013-11-01

    Pollution by metals has been of increasing concern for a number of decades but at present, the mechanism of metal accumulation in sentinel species is not fully understood and further studies are required for environmental risk assessment of metals in aquatic environments. The use of caging techniques has proven to be useful for assessment of water quality in coastal and estuarine environments. This study investigates the application of caging techniques for monitoring uptake of 20 elements [Li, Na, Mg, Al, P, K, Ca, V, Cr, Mn, Fe, Ni, Co, Cu, As, Sb, Pb, Hg, Cd and Zn] in three marine species namely Nucella lapillus, Mytilus edulis and Crassostrea gigas. Stable isotopes were used to determine predatory effects and also used for modelling metal uptake in test species and to track nutrient assimilation. Metal levels were monitored at three different coastal locations, namely Dublin Bay, Dunmore East and Omey Island over 18 weeks. Significant differences in concentrations of Mn, Co and Zn between mussels and oysters were found. Correlations between cadmium levels in N. lapillus and δ13C and δ15N suggest dietary influences in Cd uptake. Levels of Zn were highest in C. gigas compared to the other two species and levels of Zn were most elevated at the Dunmore East site. Copper levels were more elevated in all test species at both Dublin Bay and Dunmore East. Mercury was raised in all species at Dunmore East compared to the other two sites. Biotic accumulation of metals in the test species demonstrates that caging techniques can provide a valid tool for biomonitoring in metal impacted areas.

  3. Cellular and biochemical responses of the oyster Crassostrea gigas to controlled exposures to metals and Alexandrium minutum

    International Nuclear Information System (INIS)

    Highlights: •Oysters, C. gigas, were exposed to both metals and PST-producer A. minutum. •Oysters exposed to metals accumulated about thirty-six times less PSTs. •Exposure to both metals and A. minutum induced antagonistic or synergetic effects. -- Abstract: Effects of simultaneous exposure of Pacific oyster, Crassostrea gigas, to both a harmful dinoflagellate that produces Paralytic Shellfish Toxins (PST), Alexandrium minutum, and cadmium (Cd) and copper (Cu), were assessed. Oysters were exposed to a mix of Cd–Cu with two different diets (i.e. A. minutum or Tisochrysis lutea) and compared to control oysters fed A. minutum or T. lutea, respectively, without metal addition. Metals and PST accumulations, digestive gland lipid composition, and cellular and biochemical hemolymph variables were measured after 4 days of exposure. Oysters exposed to Cd–Cu accumulated about thirty-six times less PSTs than oysters exposed to A. minutum alone. Exposure to Cd–Cu induced significant changes in neutral lipids (increase in diacylglycerol – DAG – and decrease in sterols) and phospholipids (decreases in phosphatidylcholine, phosphatidylethanolamine, cardiolipin and ceramide aminoethylphosphonate) of digestive gland suggesting that lipid metabolism disruptions and/or lipid peroxidation have occurred. Simultaneously, concentrations, percentages of dead cells and phenoloxidase activity of hemocytes increased in oysters exposed to metals while reactive oxygen species production of hemocytes decreased. Feeding on the harmful dinoflagellate A. minutum resulted in significant decreases in monoacylglycerol (MAG) and DAG and ether glycerides (EG), as well as significant increases in hemocyte concentration and phagocytic activity as compared to oysters fed T. lutea. Finally, the present study revealed that short-term, simultaneous exposure to Cd–Cu and A. minutum may induce antagonistic (i.e. hemocyte concentration and phagocytosis) or synergic (i.e. DAG content in

  4. Cellular and biochemical responses of the oyster Crassostrea gigas to controlled exposures to metals and Alexandrium minutum

    Energy Technology Data Exchange (ETDEWEB)

    Haberkorn, Hansy; Lambert, Christophe; Le Goïc, Nelly [Laboratoire des Sciences de l‘Environnement Marin, UMR 6539, Institut Universitaire Européen de la Mer, Université de Bretagne Occidentale, Place Copernic, Technopôle Brest-Iroise, 29280 Plouzané (France); Quéré, Claudie [IFREMER Centre de Brest, Laboratoire de Physiologie des Invertébrés, Unité Physiologie Fonctionnelle des Organismes Marins, BP 70, 29280 Plouzané (France); Bruneau, Audrey; Riso, Ricardo; Auffret, Michel [Laboratoire des Sciences de l‘Environnement Marin, UMR 6539, Institut Universitaire Européen de la Mer, Université de Bretagne Occidentale, Place Copernic, Technopôle Brest-Iroise, 29280 Plouzané (France); Soudant, Philippe, E-mail: Philippe.Soudant@univ-brest.fr [Laboratoire des Sciences de l‘Environnement Marin, UMR 6539, Institut Universitaire Européen de la Mer, Université de Bretagne Occidentale, Place Copernic, Technopôle Brest-Iroise, 29280 Plouzané (France)

    2014-02-15

    Highlights: •Oysters, C. gigas, were exposed to both metals and PST-producer A. minutum. •Oysters exposed to metals accumulated about thirty-six times less PSTs. •Exposure to both metals and A. minutum induced antagonistic or synergetic effects. -- Abstract: Effects of simultaneous exposure of Pacific oyster, Crassostrea gigas, to both a harmful dinoflagellate that produces Paralytic Shellfish Toxins (PST), Alexandrium minutum, and cadmium (Cd) and copper (Cu), were assessed. Oysters were exposed to a mix of Cd–Cu with two different diets (i.e. A. minutum or Tisochrysis lutea) and compared to control oysters fed A. minutum or T. lutea, respectively, without metal addition. Metals and PST accumulations, digestive gland lipid composition, and cellular and biochemical hemolymph variables were measured after 4 days of exposure. Oysters exposed to Cd–Cu accumulated about thirty-six times less PSTs than oysters exposed to A. minutum alone. Exposure to Cd–Cu induced significant changes in neutral lipids (increase in diacylglycerol – DAG – and decrease in sterols) and phospholipids (decreases in phosphatidylcholine, phosphatidylethanolamine, cardiolipin and ceramide aminoethylphosphonate) of digestive gland suggesting that lipid metabolism disruptions and/or lipid peroxidation have occurred. Simultaneously, concentrations, percentages of dead cells and phenoloxidase activity of hemocytes increased in oysters exposed to metals while reactive oxygen species production of hemocytes decreased. Feeding on the harmful dinoflagellate A. minutum resulted in significant decreases in monoacylglycerol (MAG) and DAG and ether glycerides (EG), as well as significant increases in hemocyte concentration and phagocytic activity as compared to oysters fed T. lutea. Finally, the present study revealed that short-term, simultaneous exposure to Cd–Cu and A. minutum may induce antagonistic (i.e. hemocyte concentration and phagocytosis) or synergic (i.e. DAG content in

  5. Effects of chronic exposure to ionising radiation in the Pacific oyster Crassostrea gigas

    International Nuclear Information System (INIS)

    The Cotentin peninsula (Normandy, France) hosts nuclear industry facilities which operate with controlled discharges of radionuclides in the marine environment. Compared to natural radioactivity, the increase by artificial radionuclides is small but constant. As a consequence, marine species are chronically exposed to low additional doses of ionizing radiation (IR). The effects of chronic exposure to radionuclides were investigated in early stages of development of the Japanese oyster Crassostrea gigas. On the basis of literature, mollusks are expected to be particularly resistant to acute IR (UNSCEAR, 1996. Sources and effects of ionizing radiation. Report to the General Assembly, with Scientific Annex. 86 p). Two different chronic exposure conditions consisted in external (137Cs) and internal (241Am) irradiation for two weeks. Biological endpoints were analyzed in parallel at both the integrated (growth) and molecular (target stress gene expression) levels. To identify potential biological targets of IR, oysters were first exposed to very high dose rates and radionuclide activities with the perspective to reduce the levels and to derive dose-response curves. Although the initial exposure levels (137Cs 30 000 μGy.h-1; 241Am 57 000 Bq.L-1) were many orders of magnitude higher than those encountered in the natural environment, no significant change in the measured parameters was observed. This result was surprising because data from the literature showed that exposure of mussel Mytilus edulis to 3H at lower doses rates (10-100 μGy.h-1) induced DNA damage in hemocytes (Jha et al., 2005. Impact of low doses of tritium on the marine mussel, Mytilus edulis: Genotoxic effects and tissue-specific bioconcentration. Mutation Research/Genetic Toxicology and Environmental Mutagenesis 586, 47-57). To understand this apparent discrepancy between those two filtering bivalves, a new experiment was performed to compare the response of oyster exposed to 3H in the same condition

  6. Effects of chronic exposure to ionising radiation in the Pacific oyster Crassostrea gigas

    Energy Technology Data Exchange (ETDEWEB)

    Fievet, B.; Devos, A.; Voiseux, C.; Leconte-Pradines, C. [Institut de Radioprotection et de Surete' Nucleaire (France); Dallas, L.; Jha, A. [University of Plymouth (United Kingdom)

    2014-07-01

    The Cotentin peninsula (Normandy, France) hosts nuclear industry facilities which operate with controlled discharges of radionuclides in the marine environment. Compared to natural radioactivity, the increase by artificial radionuclides is small but constant. As a consequence, marine species are chronically exposed to low additional doses of ionizing radiation (IR). The effects of chronic exposure to radionuclides were investigated in early stages of development of the Japanese oyster Crassostrea gigas. On the basis of literature, mollusks are expected to be particularly resistant to acute IR (UNSCEAR, 1996. Sources and effects of ionizing radiation. Report to the General Assembly, with Scientific Annex. 86 p). Two different chronic exposure conditions consisted in external ({sup 137}Cs) and internal ({sup 241}Am) irradiation for two weeks. Biological endpoints were analyzed in parallel at both the integrated (growth) and molecular (target stress gene expression) levels. To identify potential biological targets of IR, oysters were first exposed to very high dose rates and radionuclide activities with the perspective to reduce the levels and to derive dose-response curves. Although the initial exposure levels ({sup 137}Cs 30 000 μGy.h{sup -1}; {sup 241}Am 57 000 Bq.L{sup -1}) were many orders of magnitude higher than those encountered in the natural environment, no significant change in the measured parameters was observed. This result was surprising because data from the literature showed that exposure of mussel Mytilus edulis to {sup 3}H at lower doses rates (10-100 μGy.h{sup -1}) induced DNA damage in hemocytes (Jha et al., 2005. Impact of low doses of tritium on the marine mussel, Mytilus edulis: Genotoxic effects and tissue-specific bioconcentration. Mutation Research/Genetic Toxicology and Environmental Mutagenesis 586, 47-57). To understand this apparent discrepancy between those two filtering bivalves, a new experiment was performed to compare the response

  7. Biodiversity research in the “big data” era: GigaScience and Pensoft work together to publish the most data-rich species description

    OpenAIRE

    Edmunds, Scott C.; Hunter, Chris I; Smith, Vincent; Stoev, Pavel; Penev, Lyubomir

    2013-01-01

    With the publication of the first eukaryotic species description, combining transcriptomic, DNA barcoding, and micro-CT imaging data, GigaScience and Pensoft demonstrate how classical taxonomic description of a new species can be enhanced by applying new generation molecular methods, and novel computing and imaging technologies. This 'holistic’ approach in taxonomic description of a new species of cave-dwelling centipede is published in the Biodiversity Data Journal (BDJ), with coordinated da...

  8. A comparison of fishery biology of jumbo flying squid, Dosidicus gigas outside three Exclusive Economic Zones in the Eastern Pacific Ocean

    Science.gov (United States)

    Liu, Bilin; Chen, Xinjun; Yi, Qian

    2013-05-01

    Although many studies on the fishery biology of jumbo flying squid, Dosidicus gigas, have been conducted in the coastal areas within Exclusive Economic Zones (EEZs) of various countries due to its commercial and ecological importance, limited biological information is available from waters outside these EEZs. In this paper, we examined D. gigas fishery biology from waters outside Chilean, Peruvian and Costa Rican EEZs, based on the fishery data collected by Chinese jigging vessels during 2006 to 2010. The dominant mantle lengths of D. gigas were 350-450 mm, 250-400 mm and 250-350 mm outside Chilean, Peruvian and Costa Rican EEZs, respectively. Size structure analysis show that a medium-sized group existed mostly in the waters outside the Chilean and Peruvian EEZs, whereas a small-sized group occurred mainly in the waters outside the Costa Rican EEZ. The longevity of the squid outside the Costa Rican EEZ was less than 10 months, while most of those outside Chilean and Peruvian EEZs were about 1-1.5 years and very few large individuals were 1.5-2 years old. A higher percentage of mature individuals existed outside Costa Rican EEZ implying the region as a potential spawning ground, while lower proportions of mature squid outside the Peruvian and Chilean EEZs indicated that spawning may be occurring outside our study area. Spatial differences in sizes at maturity of the squid are thought to be result from different environmental factors especially different temperature and nutrition among the three areas. Stomach-content analysis showed that cannibalism was important in the diet of D. gigas. Stress generated by jigging may increase the incidence of cannibalism.

  9. Effect of environmental drivers on the reproduction of the pacific oyster Crassostrea gigas in the Mediterranean: The case of the Thau lagoon

    OpenAIRE

    Ubertini, Martin; Lagarde, Franck; Le Gall, Patrik; Mortreux, Serge; Pernet, Fabrice; Fiandrino, Annie; Pouvreau, Stephane; Roque D'Orbcastel, Emmanuelle

    2014-01-01

    The aquaculture of the oyster Crassostrea gigas is largely based on natural recruitment of the species on spat collectors along the french Atlantic coast, the remaining spat being provided by hatcheries and nurseries. Due to an increase in the climate/meteorological variability, during the last twenty years, the natural spat collection has become variable, from null to overabundant depending on the year. Since 2008, the oyster spat mortalities worsen the situation, reducing the available spat...

  10. Additive transcriptomic variation associated with reproductive traits suggest local adaptation in a recently settled population of the Pacific oyster, Crassostrea gigas

    OpenAIRE

    Sussarellu, Rossana; Huvet, Arnaud; Lapègue, Sylvie; Quillen, Virgile; Lelong, Christophe; Cornette, Florence; Fast Jensen, Lasse; Bierne, Nicolas; Boudry, Pierre

    2015-01-01

    Background Originating from Northeast Asia, the Pacific oyster Crassostrea gigas has been introduced into a large number of countries for aquaculture purpose. Following introduction, the Pacific oyster has turned into an invasive species in an increasing number of coastal areas, notably recently in Northern Europe. Methods To explore potential adaptation of reproductive traits in populations with different histories, we set up a common garden experiment based on the comparison of progenies fr...

  11. Identification of neuropeptide Y-related receptors potentially involved in the coordination of reproduction and energy balance in the Pacific oyster Crassostrea gigas

    OpenAIRE

    Laetitia Bigot

    2010-01-01

    The pacific oyster Crassostrea gigas exhibits an annual cycle of reproduction. The regulation of this cycle requires the integration of multiple outdoor signals leading to the secretion of (neuro)hormones, such as the neuropeptide Y (NPY), which is involved in the coordination of energy flows in relation with food intake and reproduction in various animal models. As most neuropeptide hormones, the neuropeptide Y binds to receptors of the G protein-coupled receptor (GPCR) family. Screening of ...

  12. Modelling isotopes dynamics in soft tissues of Crassostrea gigas in the context of DEB theory to study the trophic ecology of oysters at large spatial scale

    OpenAIRE

    Emmery, Antoine; LEFEBVRE, Sebastien; ALUNNO-BRUSCIA, Marianne; Kooijman, S. A. L. M.

    2009-01-01

    Biological performances (growth and reproduction) of intertidal bivalves mainly rely on environmental factors such as water temperature and food sources. Both quality and quantity of bivalve food sources, however, are not easy to determine because of complex features of coastal ecosystem functioning, such as high spatial heterogeneity. This is particularly critical for oyster (Crassostrea gigas) culture in France when quantifying and explaining the variability in growth performances of oyster...

  13. Characterization of Cr. gigas oysters mortalities according to the French Ifremer/REMORA monitoring network ; with complements from phytoplankton and meteorogolical data

    OpenAIRE

    Fleury, Pierre-gildas; Mazurie, Joseph; Ropert, Michel; Soletchnik, Patrick; Le Coz, Florence

    2008-01-01

    The wide range of data from the French Ifremer/REMORA network, collected since 1993 allow a global characterization of mortalities of 1-year old and 2-years old cupped oysters Crassostrea gigas, that are cultivated in the main French oyster areas (Fleury et al, 2003), and thus a better understanding of the causes of these mortalities (Ifremer /MOREST project). The average annual mortalities on intertidal sites range from 10 to 20%. Most of the mortalities take place in Spring and Summer. ...

  14. Development of a Pacific oyster (Crassostrea gigas) 31,918-feature microarray: identification of reference genes and tissue-enriched expression patterns

    OpenAIRE

    Huvet Arnaud; Lelong Christophe; Dheilly Nolwenn M; Favrel Pascal

    2011-01-01

    Abstract Background Research using the Pacific oyster Crassostrea gigas as a model organism has experienced rapid growth in recent years due to the development of high-throughput molecular technologies. As many as 56,268 EST sequences have been sequenced to date, representing a genome-wide resource that can be used for transcriptomic investigations. Results In this paper, we developed a Pacific oyster microarray containing oligonucleotides representing 31,918 transcribed sequences selected fr...

  15. Modelling Crassostrea gigas growth and reproduction in different contrasted ecosystems by using dynamic energy budgets : generic validation of the oyster-DEB model

    OpenAIRE

    Bourles, Yves; Maurer, Daniele; Le Moine, Olivier; Geairon, Philippe; Mazurie, Joseph; Gangnery, Aline; ALUNNO-BRUSCIA, Marianne; Pouvreau, Stephane; Goulletquer, Philippe

    2009-01-01

    Oyster farming is the main aquaculture activity in France, where Pacific oyster (Crassostrea gigas) is spatially cultured from the English Channel to the Mediterranean coasts. Oyster growth performance monitored along French coasts are widely heterogeneous among culture sites and over years. Many studies have been carried out to understand the effects of environmental factors on oyster growth and physiology, by using bioenergetics growth models. However, most of these studies were site-specif...

  16. ESTIMATION OF THE CATCH PER UNIT EFFORT (CPUE) AND MEDIUM SIZE OF GIANT SQUID (DOSIDICUS GIGAS) USING DIFFERENT TYPES OF JIGS IN PERU

    OpenAIRE

    JUAN MANUEL VALLES-MEZA; JOSÉ IANNACONE; MARCO ESPINO; LUIS MARIÁTEGUI

    2013-01-01

    The aim of this study was to estimate catch per unit effort (CPUE) and mean size of the giant squid (Dosidicus gigas) using different types of jigs in the squid jig fishing fleet operating in waters of Peru during December 1999 to December 2000. Detailed information of fishing operations were registered, along with the CPUE, catch, fishing effort, dorsal mantle dorsal length (DML) and other biological variables. The following results were obtained: (1) The number of crowns of jigs alone does ...

  17. A Feedback Mechanism to Control Apoptosis Occurs in the Digestive Gland of the Oyster Crassostrea gigas Exposed to the Paralytic Shellfish Toxins Producer Alexandrium catenella

    OpenAIRE

    Jean-Luc Rolland; Walid Medhioub; Agnes Vergnes; Celina Abi-khalil; Véronique Savar; Eric Abadie; Estelle Masseret; Zouher Amzil; Mohamed Laabir

    2014-01-01

    To better understand the effect of Paralytic Shellfish Toxins (PSTs) accumulation in the digestive gland of the Pacific oyster, Crassostrea gigas, we experimentally exposed individual oysters for 48 h to a PSTs producer, the dinoflagellate Alexandrium catenella. In comparison to the effect of the non-toxic Alexandrium tamarense, on the eight apoptotic related genes tested, Bax and BI.1 were significantly upregulated in oysters exposed 48 h to A. catenella. Among the five detoxification relate...

  18. A comparison of fishery biology of jumbo flying squid,Dosidicus gigas outside three Exclusive Economic Zones in the Eastern Pacific Ocean

    Institute of Scientific and Technical Information of China (English)

    LIU Bilin; CHEN Xinjun; YI Qian

    2013-01-01

    Although many studies on the fishery biology of jumbo flying squid,Dosidicus gigas,have been conducted in the coastal areas within Exclusive Economic Zones (EEZs) of various countries due to its commercial and ecological importance,limited biological information is available from waters outside these EEZs.In this paper,we examined D.gigas fishery biology from waters outside Chilean,Peruvian and Costa Rican EEZs,based on the fishery data collected by Chinese jigging vessels during 2006 to 2010.The dominant mantle lengths of D.gigas were 350-450 mm,250-400 mm and 250-350 mm outside Chilean,Peruvian and Costa Rican EEZs,respectively.Size structure analysis show that a medium-sized group existed mostly in the waters outside the Chilean and Peruvian EEZs,whereas a small-sized group occurred mainly in the waters outside the Costa Rican EEZ.The longevity of the squid outside the Costa Rican EEZ was less than 10 months,while most of those outside Chilean and Peruvian EEZs were about 1-1.5 years and very few large individuals were 1.5-2 years old.A higher percentage of mature individuals existed outside Costa Rican EEZ implying the region as a potential spawning ground,while lower proportions of mature squid outside the Peruvian and Chilean EEZs indicated that spawning may be occurring outside our study area.Spatial differences in sizes at maturity of the squid are thought to be result from different environmental factors especially different temperature and nutrition among the three areas.Stomach-content analysis showed that cannibalism was important in the diet of D.gigas.Stress generated by jigging may increase the incidence of cannibalism.

  19. Metabolic Cost of Protein Synthesis in Larvae of the Pacific Oyster (Crassostrea gigas) Is Fixed Across Genotype, Phenotype, and Environmental Temperature.

    Science.gov (United States)

    Lee, Jimmy W; Applebaum, Scott L; Manahan, Donal T

    2016-06-01

    The energy made available through catabolism of specific biochemical reserves is constant using standard thermodynamic conversion equivalents (e.g., 24.0 J mg protein(-1)). In contrast, measurements reported for the energy cost of synthesis of specific biochemical constituents are highly variable. In this study, we measured the metabolic cost of protein synthesis and determined whether this cost was influenced by genotype, phenotype, or environment. We focused on larval stages of the Pacific oyster Crassostrea gigas, a species that offers several experimental advantages: availability of genetically pedigreed lines, manipulation of ploidy, and tractability of larval forms for in vivo studies of physiological processes. The cost of protein synthesis was measured in larvae of C. gigas for 1) multiple genotypes, 2) phenotypes with different growth rates, and 3) different environmental temperatures. For all treatments, the cost of protein synthesis was within a narrow range--near the theoretical minimum--with a fixed cost (mean ± one standard error, n = 21) of 2.1 ± 0.2 J (mg protein synthesized)(-1) We conclude that there is no genetic variation in the metabolic cost of protein synthesis, thereby simplifying bioenergetic models. Protein synthesis is a major component of larval metabolism in C. gigas, accounting for more than half the metabolic rate in diploid (59%) and triploid larvae (54%). These results provide measurements of metabolic cost of protein synthesis in larvae of C. gigas, an indicator species for impacts of ocean change, and provide a quantitative basis for evaluating the cost of resilience. PMID:27365413

  20. The Jumonji gene family in Crassostrea gigas suggests evolutionary conservation of Jmj-C histone demethylases orthologues in the oyster gametogenesis and development.

    Science.gov (United States)

    Fellous, Alexandre; Favrel, Pascal; Guo, Ximing; Riviere, Guillaume

    2014-03-15

    Jumonji (Jmj) proteins are histone demethylases, which control the identity of stem cells. Jmj genes were characterized from plants to mammals where they have been implicated in the epigenetic regulation of development. Despite the Pacific oyster Crassostrea gigas representing one of the most important aquaculture resources worldwide, the molecular mechanisms governing the embryogenesis and reproduction of this lophotrochozoan species remain poorly understood. However, annotations in the C. gigas EST library suggested the presence of putative Jumonji genes, raising the question of the conservation of this family of histone demethylases in the oyster. Using Primer walking, 5'-RACE PCR and in silico analyses, we characterized nine Jumonji orthologues in the oyster, called Cg-Jmj, bearing conserved domains critical for putative histone demethylase activity. Phylogenic analyses revealed that oyster Jumonji cluster into two distinct groups: 'single-domain Jmj' and 'multi-domain Jmj', and define 8 subgroups corresponding to each cognate orthologues in metazoans. RT-qPCR investigations showed specific regulations of Cg-Jmj mRNAs during the early development and along the reproduction cycle. Furthermore, in situ and in toto hybridizations indicate that oyster Jumonji genes are transcribed mostly within the gonad in adult oysters whereas they display a ubiquitous expression during embryonic and larval development. Our study demonstrates the presence of nine Jumonji orthologues in the oyster C. gigas. Their domain conservation and their expression profile suggest an implication during reproduction and development, questioning about the epigenetic regulation by histone methylation in lophotrochozoans. PMID:24406622

  1. Horizontal movements, vertical-habitat utilization and diet of the jumbo squid ( Dosidicus gigas) in the Pacific Ocean off Baja California Sur, Mexico

    Science.gov (United States)

    Bazzino, Gastón; Gilly, William F.; Markaida, Unai; Salinas-Zavala, César A.; Ramos-Castillejos, Jorge

    2010-07-01

    We deployed four pop-up archival-transmitting (PAT) tags on jumbo squid ( Dosidicus gigas) collected in the Pacific Ocean off the main entrance to Magdalena Bay on the Baja California peninsula in June 2005. This is the first successful deployment of PAT tags on jumbo squid in an area outside the Gulf of California. Summary data were obtained through the ARGOS satellite system for three of the tags; the fourth tag was physically recovered. All of the tagged squid tended to remain on the shallow continental shelf for several days after tagging and then moved offshore into deeper water. Three of the four squid appeared to migrate in a general southerly direction while the fourth remained offshore of Magdalena Bay. All of the squid spent most daylight hours at depths that were associated with the hypoxic oxygen minimum layer, and at night they spent a majority of time in the upper 50 m of the water column. Stomach content analysis and tag temperature-depth data during the first days after tagging revealed that the squid were feeding on pelagic red crabs ( Pleuroncodes planipes) and several larger, neritic fishes over the continental shelf off Magdalena Bay during a seasonal nearshore upwelling. Comparison of our results with those previously collected in the Gulf of California reveal that Dosidicus gigas can vary its behavior and diet to suit local environmental conditions. This adaptability is likely to be an important factor in the ability of D. gigas to invade and colonize new areas.

  2. Development of the ultrasonic fatigue testing machine due to study on giga-cycle fatigue at elevated temperature. 2001 annual report. Document on collaborative study

    International Nuclear Information System (INIS)

    An ultrasonic fatigue testing machine was developed to obtain the giga-cycle fatigue life at elevated temperature for safety and reliability of structural components in the faster breeder reactor (FBR). This testing machine consists of an amplifier, booster, horn and the equipments such as a system controller and data acquisition. The test specimen is attached at the end of the horn. The electric power generated in the amplifier is transformed into the mechanical vibration in the converter and is magnified in the booster and horn. The vibration was enough to fatigue the specimen. Since the test frequency is set at a resonant frequency, the shape and dimensions of specimen were designed so as to vibrate itself resonantly. However, the maximum amplitudes of stress and strain in the specimen can be calculated easily by measuring the amplitude of displacement at the end of the specimen. The developed ultrasonic fatigue testing machine enables to carry out the fatigue tests at 20 kHz so that it can perform the giga-cycle fatigue test within a very short time as compared with the regular fatigue testing machines such as a hydraulic fatigue testing machine. By clarifying the material strength characteristics in giga-cycle region, the life evaluation, design and examination of components will be more suitable than ever. This study will contribute to improve the safety and reliability of components in FBR. In this technical report, the specification and characteristics of the testing machine were described along with the several experimental results. (author)

  3. Foraging behavior of parasitoid chalcid to the essential oil from bark of Populus pseudo-simonii×P. Nigra and Quadraspidiotus gigas

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Four-armed airflow olfactometer was used to determining the foraging behavior of Pteroptrix longgiclava (Girault) (Hymenoptera: Aphelinidae) and Encar siagigas (Tshumakova) (Hymenoptera: Aphelinidae) to the essential oils which em itted from the healthy bark of Populus pseudo-simonii ×P. Nigra, the infested b ark injured by Quadraspidiotus gigas (Thiem & Gerneck), the body and scale of fi xed 1st-instar-nymph of Q. Gigas. The results from these experiments showed that the volatile oils produced from the injured bark and from the scale of fixed 1s t-instar-nymph had a higher attractive ability to female adults of the two species of wasps. The essential oil produced from the scale of the pest at dosages of 3-7μL and the essential oil emitted by injured bark at dosages of 5-9 Μl had a stronger alluring effect on the host searching behavior of Pteroptrix longgiclava. The essential oil from the body of fixed 1st-instar-nymph of Q. Gigas also had certain effect on the host locating effort of Pteroptrix longgiclava and Encar siagigas. Those two wasps did not shown any reaction to the essential oil produced by the healthy bark of poplar.

  4. Comparison of two extraction methods for the determination of 135 pesticides in Corydalis Rhizoma, Chuanxiong Rhizoma and Angelicae Sinensis Radix by liquid chromatography-triple quadrupole-mass spectrometry. Application to the roots and rhizomes of Chinese herbal medicines.

    Science.gov (United States)

    Liu, Jie; Tong, Ling; Li, Dongxiang; Meng, Wenting; Sun, Wanyang; Zhao, Yunli; Yu, Zhiguo

    2016-04-01

    In this study, two simple pretreatment methods were comprehensively evaluated for the determination of 135 pesticide residues in roots and rhizomes of Chinese herbal medicines (CHMs). The studied methodologies are (a) solid-phase extraction (SPE) and (b) Quick, Easy, Cheap, Effective, Rugged and Safe (QuEChERS). For SPE, extraction solvents, SPE cartridges and types and volume of eluent were accessed and optimized. For QuEChERS, different versions, acetic acid concentration and dispersive solid-phase extraction (dSPE) sorbent materials were tested. SPE and QuEChERS were estimated in recovery range, the number of pesticides that were recovered ranging from 90% to 110% and expenses in Corydalis Rhizoma, Chuanxiong Rhizoma and Angelicae Sinensis Radix. QuEChERS method showed better performance than SPE. The method showed good linearity over the range assayed 0.9986-0.9999 (1-80ng/mL for 124 pesticides, 1-50ng/mL for 10 pesticides, 1-20ng/mL for satisfar). The matrix effect was compensated by matrix-based calibration curves with internal standard. The average recoveries of all pesticides were ranging from 70% to 120% at three levels of 10, 50 and 100ng/g with relative standard deviations less than 20%. The limits of quantification of the 135 pesticides in three matrices were 1-5ng/g, which were below the maximum residue levels (MRLs) established by the European Union. The verified QuEChERS method was successfully applied to the analysis of 65 actual samples from eight different types of roots and rhizomes of CHMs. Angelicae Sinensis Radix was the most susceptible to pesticides among these samples, and the most frequently detected pesticide was carbendazim with levels below MRLs. Metalaxyl, phorate, atrazine, diniconazole, coumaphos and paclobutrazol were also detected in some samples. PMID:26990739

  5. The final spawning ground of Tachypleus gigas (Müller, 1785) on the east Peninsular Malaysia is at risk: a call for action.

    Science.gov (United States)

    Nelson, Bryan Raveen; Satyanarayana, Behara; Moh, Julia Hwei Zhong; Ikhwanuddin, Mhd; Chatterji, Anil; Shaharom, Faizah

    2016-01-01

    Tanjung Selongor and Pantai Balok (State Pahang) are the only two places known for spawning activity of the Malaysian horseshoe crab - Tachypleus gigas (Müller, 1785) on the east coast of Peninsular Malaysia. While the former beach has been disturbed by several anthropogenic activities that ultimately brought an end to the spawning activity of T. gigas, the status of the latter remains uncertain. In the present study, the spawning behavior of T. gigas at Pantai Balok (Sites I-III) was observed over a period of thirty six months, in three phases, between 2009 and 2013. Every year, the crab's nesting activity was found to be high during Southwest monsoon (May-September) followed by Northeast (November-March) and Inter monsoon (April and October) periods. In the meantime, the number of female T. gigas in 2009-2010 (Phase-1) was higher (38 crabs) than in 2010-2011 (Phase-2: 7 crabs) and 2012-2013 (Phase-3: 9 crabs) for which both increased overexploitation (for edible and fishmeal preparations) as well as anthropogenic disturbances in the vicinity (sand mining since 2009, land reclamation for wave breaker/parking lot constructions in 2011 and fishing jetty construction in 2013) are responsible. In this context, the physical infrastructure developments have altered the sediment close to nesting sites to be dominated by fine sand (2.5Xφ ) with moderately-well sorted (0.6-0.7σφ), very-coarse skewed (-2.4SKφ), and extremely leptokurtic (12.6Kφ) properties. Also, increased concentrations of Cadmium (from 4.2 to 13.6 mg kg(-1)) and Selenium (from 11.5 to 23.3 mg kg(-1)) in the sediment, and Sulphide (from 21 to 28 µg l(-1)) in the water were observed. In relation to the monsoonal changes affecting sheltered beach topography and sediment flux, the spawning crabs have shown a seasonal nest shifting behaviour in-between Sites I-III during 2009-2011. However, in 2012-2013, the crabs were mostly restricted to the areas (i.e., Sites I and II) with high oxygen (5.5-8.0 mg l

  6. Evolution of a novel nuclear receptor subfamily with emphasis on the member from the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Huang, Wen; Xu, Fei; Li, Juan; Li, Li; Que, Huayong; Zhang, Guofan

    2015-08-10

    Nuclear receptors (NRs) belong to the transcription factor superfamily that regulates development, homeostasis, differentiation, and reproduction in metazoans via control of gene expression. Recently, rapid advances in genome projects on various metazoans have provided new opportunities for studying the evolution and function of NRs. Typically structured NRs are divided into six subfamilies. Here, the gene for a typically structured NR (CgNR8A1) was cloned from the Pacific oyster Crassostrea gigas. However, this novel receptor could not be assigned to a known NR subfamily. By data mining, nine other CgNR8A1 gene homologs were identified in metazoans such as cnidarians, mollusks, annelids, echinoderms, hemichordates, and cephalochordates. Phylogenetic analysis showed that these receptors belonged to a novel NR subfamily, hereafter designated as NR8. Evolutionary analysis revealed that the NR8 subfamily was phylogenetically the third-oldest NR subfamily, and it originated from a common ancestor of Eumetazoa; several gene loss events occurred independently in ancestors of vertebrates, ecdysozoans, and platyhelminths, which do not have NR8 members. Furthermore, the function of CgNR8A1 was investigated to provide an insight into the functions of this novel NR subfamily. A nuclear localization signal peptide, GKHRNKKPRLD, was identified in CgNR8A1, and a recombinant full-length protein of CgNR8A1 was localized in the nuclei of HeLa cells. The mRNA expression profile of CgNR8A1 suggested that it might be involved in the embryogenesis of C. gigas. The electrophoretic mobility shift assay showed that CgNR8A1 binds strongly to conserved DNA core motifs DR0, DR2, and DR4 and weakly to DR1, DR3, DR5, Half, and Pal0. In summary, the novel NR8 subfamily identified in this study improves our understanding of NR evolution, and the functional analysis of CgNR8A1 provided further insights into the functions of NR8A1s. PMID:25956376

  7. Gametogenesis in the Pacific oyster Crassostrea gigas: a microarrays-based analysis identifies sex and stage specific genes.

    Directory of Open Access Journals (Sweden)

    Nolwenn M Dheilly

    Full Text Available BACKGROUND: The Pacific oyster Crassostrea gigas (Mollusca, Lophotrochozoa is an alternative and irregular protandrous hermaphrodite: most individuals mature first as males and then change sex several times. Little is known about genetic and phenotypic basis of sex differentiation in oysters, and little more about the molecular pathways regulating reproduction. We have recently developed and validated a microarray containing 31,918 oligomers (Dheilly et al., 2011 representing the oyster transcriptome. The application of this microarray to the study of mollusk gametogenesis should provide a better understanding of the key factors involved in sex differentiation and the regulation of oyster reproduction. METHODOLOGY/PRINCIPAL FINDINGS: Gene expression was studied in gonads of oysters cultured over a yearly reproductive cycle. Principal component analysis and hierarchical clustering showed a significant divergence in gene expression patterns of males and females coinciding with the start of gonial mitosis. ANOVA analysis of the data revealed 2,482 genes differentially expressed during the course of males and/or females gametogenesis. The expression of 434 genes could be localized in either germ cells or somatic cells of the gonad by comparing the transcriptome of female gonads to the transcriptome of stripped oocytes and somatic tissues. Analysis of the annotated genes revealed conserved molecular mechanisms between mollusks and mammals: genes involved in chromatin condensation, DNA replication and repair, mitosis and meiosis regulation, transcription, translation and apoptosis were expressed in both male and female gonads. Most interestingly, early expressed male-specific genes included bindin and a dpy-30 homolog and female-specific genes included foxL2, nanos homolog 3, a pancreatic lipase related protein, cd63 and vitellogenin. Further functional analyses are now required in order to investigate their role in sex differentiation in oysters

  8. Experimental infection of Pacific oyster Crassostrea gigas spat by ostreid herpesvirus 1: demonstration of oyster spat susceptibility

    Directory of Open Access Journals (Sweden)

    Schikorski David

    2011-02-01

    Full Text Available Abstract In 2008 and 2009, acute mortalities occurred in France among Pacific cupped oyster, Crassostrea gigas, spat. Different hypothesis including the implication of environmental factors, toxic algae and/or pathogens have been explored. Diagnostic tests indicated that OsHV-1 including a particular genotype, termed OsHV-1 μVar, was detected in most of samples and especially in moribund oysters with the highlighting of virus particles looking like herpes viruses by TEM examination. In this study, an experimental protocol to reproduce OsHV-1 infection in laboratory conditions was developed. This protocol was based on the intramuscular injection of filtered (0.22 μm tissue homogenates prepared from naturally OsHV-1 infected spat collected on French coasts during mortality outbreaks in 2008. Results of the experimental trials showed that mortalities were induced after injection. Moreover, filtered tissue homogenates induced mortalities whereas the same tissue homogenates exposed to an ultraviolet (UV treatment did not induce any mortality suggesting that oyster spat mortalities require the presence of a UV sensitive agent. Furthermore, analysis of injected oyster spat revealed the detection of high amounts of OsHV-1 DNA by real-time quantitative PCR. Finally, TEM analysis demonstrated the presence of herpes virus particles. The developed protocol allowed to maintain sources of infective virus which can be useful for the development of further studies concerning the transmission and the development of OsHV-1 infection.

  9. Exposure to the Neurotoxic Dinoflagellate, Alexandrium catenella, Induces Apoptosis of the Hemocytes of the Oyster, Crassostrea gigas

    Directory of Open Access Journals (Sweden)

    Walid Medhioub

    2013-12-01

    Full Text Available This study assessed the apoptotic process occurring in the hemocytes of the Pacific oyster, Crassostrea gigas, exposed to Alexandrium catenella, a paralytic shellfish toxins (PSTs producer. Oysters were experimentally exposed during 48 h to the toxic algae. PSTs accumulation, the expression of 12 key apoptotic-related genes, as well as the variation of the number of hemocytes in apoptosis was measured at time intervals during the experiment. Results show a significant increase of the number of hemocytes in apoptosis after 29 h of exposure. Two pro-apoptotic genes (Bax and Bax-like implicated in the mitochondrial pathway were significantly upregulated at 21 h followed by the overexpression of two caspase executor genes (caspase-3 and caspase-7 at 29 h, suggesting that the intrinsic pathway was activated. No modulation of the expression of genes implicated in the cell signaling Fas-Associated protein with Death Domain (FADD and initiation-phase (caspase-2 was observed, suggesting that only the extrinsic pathway was not activated. Moreover, the clear time-dependent upregulation of five (Bcl2, BI-1, IAP1, IAP7B and Hsp70 inhibitors of apoptosis-related genes associated with the return to the initial number of hemocytes in apoptosis at 48 h of exposure suggests the involvement of strong regulatory mechanisms of apoptosis occurring in the hemocytes of the Pacific oyster.

  10. Inheritance mode of microsatellite loci and their use for kinship analysis in the Pacific oyster ( Crassostrea gigas)

    Science.gov (United States)

    Li, Qi; Zheng, Xiaodong; Yu, Ruihai

    2008-08-01

    Five full-sib families of the Pacific oyster ( Crassostrea gigas) larvae were used to study the mode of inheritance at eight microsatellite loci, and the feasibility of these markers for kinship estimate was also examined. All eight microsatellite loci were compatible with Mendelian inheritance. Neither evidence of sex-linked barriers to transmission nor evidence of major barriers to fertilization between gametes from the parents was shown. Three of the eight loci showed the presence of null alleles in four families, demonstrating the need to conduct comprehensive species-specific inheritance studies for microsatellite loci used in population genetic studies. Although the null allele heterozygotes were considered as homozygotes in the calculation of genetic distance, offspring from five full-sib families were unambiguously discriminated in the neighbor-joining dendrogram. This result indicates that the microsatellite markers may be capable of discriminating between related and unrelated oyster larvae in the absence of pedigree information, and is applicable to the investigation of the effective number of parents contributing to the hatchery population of the Pacific oyster.

  11. [A study on feeding ecology and migration patterns of Dosidicus gigas off Peru using stable isotope analysis].

    Science.gov (United States)

    Gong, Yi; Chen, Xin-jun; Li, Yun-kai; Han, Meng-jie

    2015-09-01

    As a pelagic cephalopod and one of the main target species of Chinese distant water fishery, jumbo squids (Dosidicus gigas) play a major role in the marine ecosystems of the eastern Pacific. Understanding the feeding ecology and migration patterns of jumbo squids is of importance for better utilizing the resources. The isotopic signatures of gladius, have been proved to be a powerful tool to reveal high resolution and ontogenic variations in individual foraging strategies of squids; which is an archival tissue with no elemental turnover after formation. In this study, the growth equation of gladius proostracum was established based on the age information determined by statolith. Gladius was cut successionally by the growth curve of gladius proostracum, the stable isotopic values of the gladius profiles were determined, and the feeding ecology and migration patterns of jumbo squids during its growth process were investigated. Results showed that the jumbo squids began to migrate after 180 days of postnatal, and their trophic levels tended to decrease throughout the life span. These results demonstrated the feasibility of using continuous sampling hard tissue to study the feeding ecology and habitat transfer of jumbo squids. PMID:26785574

  12. Efficacy of natural biocide on control of microbial induced corrosion in oil pipelines mediated by Desulfovibrio vulgaris and Desulfovibrio gigas

    Institute of Scientific and Technical Information of China (English)

    Meeta Lavania; Priyangshu M. Sarma; Ajoy K. Mandal; Simrita Cheema; Banwari Lal

    2011-01-01

    We compared the efficacy of a natural biocide with four chemical tetrakishydroxymethyl phosphonium sulfonate,benzyl trimethyl ammonium chloride,and formaldehyde,glutaraldehyde,to control microbial induced corrosion in oil pipelines.The efficacy of biocides were monitored against Desulfovibrio vulgaris and Desulfovibrio gigas in experimental pipes by measuring cell counts,H2S production,Fe(II) production,production of extracellular polymeric substances and structure of biofilm.The treatment with cow urine had minimum planktonic cell counts of 3 × 102 CFU/mL as well as biofiim cell counts of 9 × 101 CFU/mL as compared with tetrakishydroxyl methyl phosphonium sulfonate,benzyl trimethyl ammonium chloride,formaldehyde and glutaraldehyde.Sulfide production was the lowest with cow urine (0.08 mmol/L),followed by tetrakishydroxymethyl phosphonium sulfonate 0.72 mmoi/L.On day 90 of treatment,Fe(II) production was also found to be the lowest with cow urine.The scanning electron microscopic studies indicated that the biofilm bacteria were killed by cow urine.These results demonstrate the cow urine mediated control of microbially induced corrosion,and this is indicative of its potential as a viable substitute of toxic biocides.To the best of our knowledge,this seems to be the first report which screens possible biocidal activity by cow urine as compared to the most common biocides which oil industry is currently using.

  13. Pacific oyster (Crassostrea gigas) hemocyte are not affected by a mixture of pesticides in short-term in vitro assays.

    Science.gov (United States)

    Moreau, Pierrick; Burgeot, Thierry; Renault, Tristan

    2014-04-01

    Pesticides are frequently detected in estuaries among the pollutants found in estuarine and coastal areas and may have major ecological consequences. They could endanger organism growth, reproduction, or survival. In the context of high-mortality outbreaks affecting Pacific oysters, Crassostrea gigas, in France since 2008, it appears of importance to determine the putative effects of pesticides on oyster susceptibility to infectious agents. Massive mortality outbreaks reported in this species, mainly in spring and summer, may suggest an important role played by the seasonal use of pesticides and freshwater input in estuarine areas where oyster farms are frequently located. To understand the impact of some pesticides detected in French waters, their effects on Pacific oyster hemocytes were studied through short-term in vitro experiments. Bivalve immunity is mainly supported by hemocytes eliminating pathogens by phagocytosis and producing compounds including lysosomal enzymes and antimicrobial molecules. In this study, oyster hemocytes were incubated with a mixture of 14 pesticides and metaldehyde alone, a molecule used to eliminate land mollusks. Hemocyte parameters including dead/alive cells, nonspecific esterase activities, intracytoplasmic calcium, lysosome number and activity, and phagocytosis were monitored by flow cytometry. No significant effect of pesticides tested at different concentrations was reported on oyster hemocytes maintained in vitro for short-term periods in the present study. It could be assumed that these oyster cells were resistant to pesticide exposure in tested conditions and developing in vivo assays appears as necessary to better understand the effects of pollutants on immune system in mollusks. PMID:23818075

  14. Application of a dynamic energy budget model to the Pacific oyster, Crassostrea gigas , reared under various environmental conditions

    Science.gov (United States)

    Pouvreau, Stéphane; Bourles, Yves; Lefebvre, Sébastien; Gangnery, Aline; Alunno-Bruscia, Marianne

    2006-08-01

    The Dynamic Energy Budget (DEB) model (Kooijman, S.A.L.M., 1986. Energy budgets can explain body size relations. J. Theor. Biol. 121, 269-282; Kooijman, S.A.L.M., 2000. Dynamic Energy and Mass Budgets in Biological Systems. Cambridge University Press, Cambridge, 424 pp.) has been adapted to describe the dynamics of growth and reproduction of the Pacific oyster ( Crassostrea gigas) reared in different areas under conditions ranging from controlled to natural. The values of the model parameters were estimated from available physiological data and from published information. The sets of data used to validate the model came from three long-term growth experiments (> 5 months) performed on Pacific oysters reared under different conditions of food and environment. The forcing variables were temperature and phytoplankton densities, the latter being assessed from in vivo fluorescence and chlorophyll-a concentration measurement. The successful validation of the model on the three data sets demonstrated its ability to capture the dynamics of the energy budget in the Pacific oyster in various environments with the same set of parameters. The only parameter that varied between simulations was the half-saturation coefficient (X K), because of a different diet composition between the three environments under test. The model successfully reproduced quantitatively the growth and reproduction and the timing of spawning. These first simulation data led us to propose several promising perspectives of application for this model in shellfish ecosystems.

  15. Study of the antioxidant capacity in gills of the Pacific oyster Crassostrea gigas in link with its reproductive investment.

    Science.gov (United States)

    Béguel, Jean-Philippe; Huvet, Arnaud; Quillien, Virgile; Lambert, Christophe; Fabioux, Caroline

    2013-01-01

    Energy allocation principle is a core element of life-history theory in which "the cost of reproduction" corresponds to an acceleration of senescence caused by an increase in reproductive investment. In the "theory of aging", senescence is mainly due to the degradation of lipids, proteins and DNA by reactive oxygen species (ROS), by-products of oxidative metabolism. Some studies have shown that oxidative stress susceptibility could be a cost of reproduction. The present study investigates the effect of reproductive investment on antioxidant capacity in the gills of a species with a very high reproductive investment, the Pacific oyster Crassostrea gigas. We used RNA interference targeting the oyster vasa-like gene (Oyvlg) to produce oysters with contrasted reproductive investment. Antioxidant capacity was studied by measuring the mRNA levels of genes encoding major antioxidant enzymes, and the activity of these enzymes. The highest reproductive investment was associated with the highest transcript levels for glutathione peroxidase and extra-cellular and mitochondrial superoxide dismutase. In contrast, lipid peroxidation did not show any sign of oxidative damage whatever the reproductive investment. Up-regulation of certain genes encoding enzymes involved in the first step of ROS detoxification could therefore be a part of the organism's strategy for managing the pro-oxidant species produced by heavy reproductive investment. PMID:23073513

  16. Effect of phytoplankton and temperature on the reproduction of the Pacific oyster Crassostrea gigas: Investigation through DEB theory

    Science.gov (United States)

    Bernard, I.; de Kermoysan, G.; Pouvreau, S.

    2011-11-01

    DEB theory can be used to obtain a detailed description of energy allocation in organisms and the control of this allocation by temperature and food concentration. In this study, we modified the model of Bourlès et al. (2009) developed for the Pacific oyster, Crassostrea gigas, to improve the description of reproductive effort. The model was amended in two ways: a new set of parameters was incorporated and a full description of gonad construction in spring was added, with a new state variable. The application of this model to a dataset for oyster growth measured in four bays over two years showed that this model better described reproductive effort, without modifying overall growth dynamics. We then explored the reproductive responses of oysters to their environment in greater detail, by applying this new version of the model with the theoretical forcing variables of phytoplankton concentration and temperature. Spawning time was found to be driving principally by yearly mean temperature, and reproductive effort was found to depend mostly on the half-saturation coefficient of the functional response. These results highlight the importance of the half-saturation coefficient and provide additional support for field research on the food preferences of oysters.

  17. Responses of diploid and triploid Pacific oysters Crassostrea gigas to Vibrio infection in relation to their reproductive status.

    Science.gov (United States)

    De Decker, S; Normand, J; Saulnier, D; Pernet, F; Castagnet, S; Boudry, P

    2011-02-01

    Several Vibrio species are known to be pathogenic to the Pacific oyster Crassostrea gigas. Survival varies according to pathogen exposure and high mortality events usually occur in summer during gametogenesis. In order to study the effects of gametogenetic status and ploidy (a factor known to affect reproduction allocation in oysters) on vibriosis survival, we conducted two successive experiments. Our results demonstrate that a common bath challenge with pathogenic Vibrio splendidus and Vibrio aestuarianus on a mixture of mature, spawning and non-mature oysters can lead to significant mortality. Previous bath challenges, which were done using only non-mature oysters, had not produced mortality. Immunohistochemical analyses showed the affinity of Vibrio for gonadic tissues, highlighting the importance of sexual maturity for vibriosis infection processes in oysters. Mortality rate results showed poor repeatability between tanks, however, in this bath challenge. We then tested a standardized and repeatable injection protocol using two different doses of the same combination of two Vibrio species on related diploid and triploid oysters at four different times over a year. Statistical analyses of mortality kinetics over a 6-day period after injection revealed that active gametogenesis periods correspond to higher susceptibility to vibriosis and that there is a significant interaction of this seasonal effect with ploidy. However, no significant advantage of triploidy was observed. Triploid oysters even showed lower survival than diploid counterparts in winter. Results are discussed in relation to differing energy allocation patterns between diploid and triploid Pacific oysters. PMID:20833182

  18. Age, maturation, and population structure of the Humboldt squid Dosidicus gigas off the Peruvian Exclusive Economic Zones

    Science.gov (United States)

    Liu, Bilin; Chen, Xinjun; Chen, Yong; Tian, Siquan; Li, Jianhua; Fang, Zhou; Yang, Mingxia

    2013-01-01

    Age, maturation and population structure of the Humboldt squid Dosidicus gigas were studied based on random sampling of the Chinese jigging fishery off the Peruvian Exclusive Economic Zones (EEZ) during 2008-2010. Estimated ages ranged from 144 to 633 days, confirming that the squid is a short-lived species with longevity no longer than 2 years. Occurrence of mature females and hatching in each month indicated that Humboldt squid spawned year-round. Back-calculated hatching dates for the samples were from January 22nd, 2008 to April 22nd, 2010 with a peak between January and March. Two size-based and two hatching date-based populations could be defined from mantle length (ML) at maturity and back-calculated hatching dates, respectively. Females matured at a larger size than males, and there was a significant difference in ML at maturity between the two hatching groups ( P <0.05). The waters adjacent to 11°S off the Peruvian EEZ may be a potential spawning ground. This study shows the complexity of the population structure and large variability in key life history parameters in the Humboldt squid off the Peruvian EEZ, which should be considered in the assessment and management of this important resource.

  19. Age, maturation, and population structure of the Humboldt squid Dosidicus gigas off the Peruvian Exclusive Economic Zones

    Institute of Scientific and Technical Information of China (English)

    LIU Bilin; CHEN Xinjun; CHEN Yong; TIAN Siquan; LI Jianhua; FANG Zhou; YANG Mingxia

    2013-01-01

    Age,maturation and population structure of the Humboldt squid Dosidicus gigas were studied based on random sampling of the Chinese jigging fishery off the Peruvian Exclusive Economic Zones (EEZ) during 2008-2010.Estimated ages ranged from 144 to 633 days,confirming that the squid is a short-lived species with longevity no longer than 2 years.Occurrence of mature females and hatching in each month indicated that Humboldt squid spawned year-round.Back-calculated hatching dates for the samples were from January 22nd,2008 to April 22nd,2010 with a peak between January and March.Two size-based and two hatching date-based populations could be defined from mantle length (ML) at maturity and back-calculated hatching dates,respectively.Females matured at a larger size than males,and there was a significant difference in ML at maturity between the two hatching groups (P<0.05).The waters adjacent to 11°S off the Peruvian EEZ may be a potential spawning ground.This study shows the complexity of the population structure and large variability in key life history parameters in the Humboldt squid off the Peruvian EEZ,which should be considered in the assessment and management of this important resource.

  20. ESR studies on the thermal decomposition of trimethylamine oxide to formaldehyde and dimethylamine in jumbo squid (Dosidicus gigas) extract.

    Science.gov (United States)

    Zhu, Junli; Jia, Jia; Li, Xuepeng; Dong, Liangliang; Li, Jianrong

    2013-12-15

    The effects of ferrous iron, heating temperature and different additives on the decomposition of trimethylamine oxide (TMAO) to formaldehyde (FA) and dimethylamine (DMA) and generation of free radicals in jumbo squid (Dosidicus gigas) extract during heating were evaluated by electron spin resonance (ESR). The thermal decomposition of TMAO to TMA, DMA and FA and free radical signals was observed in squid extract, whereas no DMA, FA and free radical signals were detected in cod extract or in aqueous TMAO solution in vitro at high temperatures. Significant increase in levels of DMA, FA and radicals intensity were observed in squid extract and TMAO solution in the presence of ferrous iron with increasing temperature. Hydrogen peroxide stimulated the production of DMA, FA and ESR signals in squid extract, while citric acid, trisodium citrate, calcium chloride, tea polyphenols and resveratrol had the opposite effect. Similar ESR spectra of six peaks regarded as amminium radical were detected in the squid extract and TMAO-iron(II) solution, suggesting that the amminium radical was involved in the decomposition of TMAO. PMID:23993561

  1. Production and functional evaluation of a protein concentrate from giant squid (Dosidicus gigas) by acid dissolution and isoelectric precipitation.

    Science.gov (United States)

    Cortés-Ruiz, Juan A; Pacheco-Aguilar, Ramón; Elena Lugo-Sánchez, M; Gisela Carvallo-Ruiz, M; García-Sánchez, Guillermina

    2008-09-15

    A protein concentrate from giant squid (Dosidicus gigas) was produced under acidic conditions and its functional-technological capability evaluated in terms of its gel-forming ability, water holding capacity and colour attributes. Technological functionality of the concentrate was compared with that of squid muscle and a neutral concentrate. Protein-protein aggregates insoluble at high ionic strength (I=0.5M), were detected in the acidic concentrate as result of processing with no preclusion of its gel-forming ability during the sol-to-gel thermal transition. Even though washing under acidic condition promoted autolysis of the myosin heavy chain, the acidic concentrate displayed an outstanding ability to gel giving samples with a gel strength of 455 and 1160gcm at 75% and 90% compression respectively, and an AA folding test grade indicative of high gel strength, elasticity, and cohesiveness. The process proved to be a good alternative for obtaining a functional protein concentrate from giant squid muscle. PMID:26049243

  2. Efficacy of natural biocide on control of microbial induced corrosion in oil pipelines mediated by Desulfovibrio vulgaris and Desulfovibrio gigas.

    Science.gov (United States)

    Lavania, Meeta; Sarma, Priyangshu M; Mandal, Ajoy K; Cheema, Simrita; Lal, Banwari

    2011-01-01

    We compared the efficacy of a natural biocide with four chemical tetrakishydroxymethyl phosphonium sulfonate, benzyl trimethyl ammonium chloride, and formaldehyde, glutaraldehyde, to control microbial induced corrosion in oil pipelines. The efficacy of biocides were monitored against Desulfovibrio vulgaris and Desulfovibrio gigas in experimental pipes by measuring cell counts, H2S production, Fe(II) production, production of extracellular polymeric substances and structure of biofilm. The treatment with cow urine had minimum planktonic cell counts of 3 x 10(2) CFU/mL as well as biofilm cell counts of 9 x 10(1) CFU/mL as compared with tetrakishydroxyl methyl phosphonium sulfonate, benzyl trimethyl ammonium chloride, formaldehyde and glutaraldehyde. Sulfide production was the lowest with cow urine (0.08 mmol/L), followed by tetrakishydroxymethyl phosphonium sulfonate 0.72 mmol/L. On day 90 of treatment, Fe(II) production was also found to be the lowest with cow urine. The scanning electron microscopic studies indicated that the biofilm bacteria were killed by cow urine. These results demonstrate the cow urine mediated control of microbially induced corrosion, and this is indicative of its potential as a viable substitute of toxic biocides. To the best of our knowledge, this seems to be the first report which screens possible biocidal activity by cow urine as compared to the most common biocides which oil industry is currently using. PMID:22128548

  3. Assessment of bioavailability of weathered oil residues using caged bivalves (Crassostrea gigas and Mytilus edulis) as indicator organisms

    International Nuclear Information System (INIS)

    In April 1988, an estimated 400,000 gallons of San Joaquin Valley crude oil spilled into Peyton Slough and subsequently into Suisun Bay from an oil refinery in Martinez, California. The crude oil initially impacted a number of ecologically sensitive environments including estuarine water, marsh grasses, marsh and shoreline sediment, and intertidal sediment. A four-year oil weathering study was performed to determine the concentrations of environmentally important compounds in the stranded oil, to monitor changes in these concentrations over time, and to assess the potential long-term impact of the spilled oil in these various environments. As a result of marked differences in the rate of weathering at the different sites, a bioaccumulation component was added to the original study design in order to assess the bioavailability of crude oil residues remaining four-years post spill. Caged bivalves (Crassostrea gigas and Mytilus edulis) were deployed at the three study sites as sentinel organisms and exposed for three months. Sediments and organism tissues were analyzed using gas chromatography/mass spectrometry for polynuclear aromatic hydrocarbon (PAH) assemblages characteristics of the spilled oil. Advanced hydrocarbon fingerprinting techniques (e.g., double ratio plots of characteristic alkyl PAHs) were used to match distributions in the organisms and in the study site sediments

  4. Embryotoxic and genotoxic effects of heavy metals and pesticides on early life stages of Pacific oyster (Crassostrea gigas)

    International Nuclear Information System (INIS)

    Highlights: ► Impact of pesticides and heavy metals on early life stage of Pacific oyster. ► Toxicity investigated using embryolarvae and comet assays. ► Relationship between embryotoxicity and genotoxicty. ► Genotoxic and embryotoxic effects at enviromnental pollutant concentrations. - Abstract: This study evaluated embryotoxicity and genotoxicity of two dissolved metals copper and cadmium (Cu and Cd) and two pesticides (metolachlor and irgarol) occurring in Arcachon Bay (SW France) in Pacific oyster (Crassostrea gigas) larvae and investigated the relationship between those two endpoints. Embryotoxicity was measured by calculating the percentage of abnormal D-shaped larvae and genotoxicity was evaluated with DNA strand breaks using the comet assay. After 24 h exposure, significant increases of the percentage of abnormal D-larvae and the DNA strand breaks were observed from 0.1 μg L−1 for Cu, 10 μg L−1 for Cd and 0.01 μg L−1 for both irgarol and metolachlor in comparison with the controls. A strong positive relationship between embryotoxicity and genotoxicity was recorded for Cu, Cd and metolachlor. The current study suggests that copper, irgarol and metolachlor can induce larval abnormalities and DNA damage in a population of exposed oysters at environmentally relevant concentrations.

  5. A 5 Giga Samples Per Second 8-Bit Analog to Digital Printed Circuit Board for Radio Astronomy

    Science.gov (United States)

    Jiang, Homin; Liu, Howard; Guzzino, Kim; Kubo, Derek; Li, Chao-Te; Chang, Ray; Chen, Ming-Tang

    2014-08-01

    We have designed, manufactured, and characterized an 8-bit 5 Giga samples per second (Gsps) ADC printed circuit board assembly (PCBA). An e2v EV8AQ160 ADC chip was used in the design and the board is plug compatible with the field programmable gate array (FPGA) board developed by the Collaboration for Astronomy Signal Processing and Electronics Research (CASPER) community. Astronomical interference fringes were demonstrated across a single baseline pair of antennas using two ADC boards on the Yuan Tseh Lee Array for Microwave Background Anisotropy (AMiBA) telescope. Several radio interferometers are using this board for bandwidth expansion, such as Submillimeter Array; also, several experimental telescopes are building new spectrometers using the same board. The ADC boards were attached directly to the Reconfigurable Open Architecture Computing Hardware (ROACH-2) FPGA board for processing of the digital output signals. This ADC board provides the capability of digitizing radio frequency signals from DC to 2 GHz (3 dB bandwidth), and to an extended bandwidth of 2.5 GHz (5 dB) with derated performance. The following worst-case performance parameters were obtained over 2 GHz: spur free dynamic range (SFDR) of 44 dB, signal-to-noise and distortion (SINAD) of 35 dB, and effective number of bits (ENOB) of 5.5.

  6. A preliminary investigation of the variables affecting the distribution of giant gartersnakes (Thamnophis gigas) in the Sacramento Valley, California

    Science.gov (United States)

    Halstead, Brian J.; Skalos, Shannon M.; Casazza, Michael L.; Wylie, Glenn D.

    2015-01-01

    Giant gartersnakes (Thamnophis gigas) comprise a species of rare, semi-aquatic snake precinctive to the Central Valley of California. Because of the loss of more than 90% of their natural habitat, giant gartersnakes are listed as Threatened by the United States and California endangered species acts. Little is known, however, about the distribution of giant gartersnakes in the Sacramento Valley, which is where most extant populations occur. We conducted detection-nondetection surveys for giant gartersnakes throughout the rice-growing regions of the Sacramento Valley, and used occupancy models to examine evidence for the effects of landscape-scale GIS-derived variables, local habitat and vegetation composition, and prey communities on patterns of giant gartersnake occurrence. Although our results are based on a relatively small sample of sites, we found that distance to historic marsh, relative fish count, and an interaction of distance to historic marsh with proportion of habitat composed of submerged vegetation were important variables for explaining occupancy of giant gartersnakes. In particular, giant gartersnakes were more likely to occur closer to historic marsh and where relatively fewer fish were captured in traps. At locations in or near historic marsh, giant gartersnakes were more likely to occur in areas with less submerged vegetation, but this relationship was reversed (and more uncertain) at sites distant from historic marsh. Additional research with a larger sample of sites would further elucidate the distribution of giant gartersnakes in the Sacramento Valley.

  7. Abundance and sexual size dimorphism of the giant gartersnake (Thamnophis gigas) in the Sacramento valley of California

    Science.gov (United States)

    Wylie, G.D.; Casazza, M.L.; Gregory, C.J.; Halstead, B.J.

    2010-01-01

    The Giant Gartersnake (Thamnophis gigas) is restricted to wetlands of the Central Valley of California. Because of wetland loss in this region, the Giant Gartersnake is both federally and state listed as threatened. We conducted markrecapture studies of four populations of the Giant Gartersnake in the Sacramento Valley (northern Central Valley), California, to obtain baseline data on abundance and density to assist in recovery planning for this species. We sampled habitats that ranged from natural, unmanaged marsh to constructed managed marshes and habitats associated with rice agriculture. Giant Gartersnake density in a natural wetland (1.90 individuals/ha) was an order of magnitude greater than in a managed wetland subject to active season drying (0.17 individuals/ha). Sex ratios at all sites were not different from 1 1, and females were longer and heavier than males. Females had greater body condition than males, and individuals at the least disturbed sites had significantly greater body condition than individuals at the managed wetland. The few remaining natural wetlands in the Central Valley are important, productive habitat for the Giant Gartersnake, and should be conserved and protected. Wetlands constructed and restored for the Giant Gartersnake should be modeled after the permanent, shallow wetlands representative of historic Giant Gartersnake habitat. ?? 2010 Society for the Study of Amphibians and Reptiles.

  8. A simple proof of the characterization of functions of low Aviles Giga energy on a ball via regularly

    CERN Document Server

    Lorent, Andrew

    2010-01-01

    The Aviles Giga functional is a well known second order functional that forms a model for blistering and in a certain regime liquid crystals, a related functional models thin magnetized films. Given Lipschitz domain $\\Omega\\subset R^2$ the functional is $I_{\\epsilon}(u)=1/2\\int_{\\Omega} \\epsilon^{-1}|1-|Du|^2|^2+\\epsilon|D^2 u|^2$ where $u$ belongs to the subset of functions in $W^{2,2}_{0}(\\Omega)$ whose gradient (in the sense of trace) satisfies $Du(x)\\cdot \\eta_x=1$ where $\\eta_x$ is the inward pointing unit normal to $\\partial \\Omega$ at $x$. In Jabin, Otto, Perthame characterized a class of functions which includes all limits of sequences $u_n\\in W^{2,2}_0(\\Omega)$ with $I_{\\epsilon_n}(u_n)\\to 0$ as $\\epsilon_n\\to 0$. A corollary to their work is that if there exists such a sequence $(u_n)$ for a bounded domain $\\Omega$, then $\\Omega$ must be a ball and (up to change of sign) $u:=\\lim_{n\\to \\infty} u_n =\\mathrm{dist}(\\cdot,\\partial\\Omega)$. Recently we provided a quantitative generalization of this corol...

  9. Inheritance mode of microsatellite loci and their use for kinship analysis in the Pacific oyster (Crassostrea gigas)

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Five full-sib families of the Pacific oyster (Crassostrea gigas) larvae were used to study the mode of inheritance at eight microsatellite loci, and the feasibility of these markers for kinship estimate was also examined. All eight microsatellite loci were compatible with Mendelian inheritance. Neither evidence of sex-linked barriers to transmission nor evidence of major barriers to fertilization between gametes from the parents was shown. Three of the eight loci showed the presence of null alleles in four families, demonstrating the need to conduct comprehensive species-specific inheritance studies for microsatellite loci used in population genetic studies. Although the null allele heterozygotes were considered as homozygotes in the calculation of genetic distance, offspring from five full-sib families were unambiguously discriminated in the neighbor-joining dendrogram. This result indicates that the microsatellite markers may be capable of discriminating between related and unrelated oyster larvae in the absence of pedigree information, and is applicable to the investigation of the effective number of parents contributing to the hatchery population of the Pacific oyster.

  10. Spatio-temporal variations in biological performances and summer mortality of the Pacific oyster Crassostrea gigas in Normandy (France)

    Science.gov (United States)

    Costil, Katherine; Royer, Juliette; Ropert, Michel; Soletchnik, Patrick; Mathieu, Michel

    2005-11-01

    Mortality and biological performances of half-grown Crassostrea gigas were studied from spring 2000 to autumn 2001 at six instrumented stations located in two areas (Gefosse and Grandcamp) of the Bay of Veys (Normandy). Shell and meat growth, condition indexes and a macroscopic maturity index were determined on oysters deployed at the six stations in order to assess spatial variability in the influence of environmental conditions. In addition, histological and biochemical analyses were performed in order to determine the sex and establish the reproductive cycle (at all six sites) and the biochemical composition (at four stations). The data set including monthly mean temperatures and data provided by examination of 2,837 oysters were analysed by Principal Component Analysis and a Hierarchical Ascending Clustering which resulted in the formation of four clusters. The highest station on the shoreline belonged to a cluster characterized notably by low total weight due to a short immersion/feeding period, whereas all other stations belonged to another single cluster. Nevertheless, various biological differences were found between these stations, e.g. the reproductive cycle was generally synchronized throughout the bay but some differences relative to spawning occurrence were observed. In 2000, oyster mortality was higher at Gefosse than at Grandcamp, the latter being a more marine area. In 2001, oyster mortalities were significantly higher and all stations were strongly affected. In the Bay of Veys, oyster biological performances and mortality thus showed spatio-temporal variations which were worthy to be discussed.

  11. 杨盾蚧天敌种类及主要天敌自然控制效果调查%Natural Enemy Species for Quadraspidiotus gigas & Natural Control Effects for Its Major Predators

    Institute of Scientific and Technical Information of China (English)

    张乐群

    2013-01-01

    对克拉玛依农田开发区防护林上发生的杨盾蚧天敌昆虫种类及其自然控制作用进行了调查。调查发现,杨盾蚧天敌昆虫主要是长棒四节蚜小蜂和孪斑唇瓢虫,其中长棒四节蚜小蜂自然寄生率高达41.5%。此外,在室内对杨盾蚧的主要捕食性天敌孪斑唇瓢虫的捕食量以及孪斑唇瓢虫和杨盾蚧之间的密度功能反应进行了研究。研究发现,孪斑唇瓢虫对杨盾蚧若虫具有较大的捕食潜能,而且对若虫的寻找效应均随着猎物密度的增加而降低。%Species of natural enemies for Quadraspidiotus gigas which damaged the protection forest of the karamay farmland and their natural control effects were investigated .Investigation shows that :natural enemies for Quadras-pidiotus gigas are mainly Pteroptrix longiclava and Chilogorus geminus ;natural parasitism rate of Pteroptrix longiclava are 41 .5% .Predation of Chilogorus geminus (main predators of Quadraspidiotus gigas )indoors & den-sity functional response between Pteroptrix longiclava & Quadraspidiotus gigas were studied .The research dis-covers that :Chilogorus geminus have potential predator-prey for nymphs of Quadraspidiotus gigas ;looking effects of Chilogorus geminus on nymphs of Quadraspidiotus gigas decrease with the increase of prey density .

  12. Protective effects of angelica polysaccharide against focal cerebral ischemia and reperfusion injury in rats%当归多糖对大鼠脑缺血再灌注损伤的保护作用

    Institute of Scientific and Technical Information of China (English)

    李云峰

    2012-01-01

    目的 观察当归多糖对大鼠脑缺血再灌注损伤和神经功能的影响.方法 将40只大鼠随机分为假手术组、模型组及当归多糖低剂量组、当归多糖高剂量组,每组10只.分组后即开始腹腔注射不同剂量的当归多糖氯化钠注射液,每天1次,连续5d.假手术组和模型组使用生理盐水.于第5天腹腔注射1h后建立脑缺血再灌注模型,各组动物缺血3h后再灌注24h取材.其间观察大鼠的神经功能行为的变化,检测脑组织的超氧化物歧化酶(SOD)、谷胱甘肽(GSH)及谷胱甘肽过氧化物酶(GSH-PX)活性与丙二醛(MDA)的含量.结果 相对于模型组,当归多糖处理组大鼠的神经功能损害明显减轻,脑组织的SOD、GSH及GSH-PX活性明显增高,而脑组织的MDA含量明显减少,而且具有明显的剂量依赖性.结论 当归多糖能够减轻脑细胞缺血再灌注损伤,机制与清除自由基的作用有关.%Objective It is to observe the effects of angelica polysaccharide( APS ) on focal cerebral ischemia reperfusion injury and nervous function in rats. Methods Fourty male Wistar rats were randomly divided into four groups( ten in every group):sham -operated group, model group, low and high dosage of APS treatment groups. The animals in treatment group were given different dosage of APS sodium chloride once every day by intraperitoneal injecting for five days. Sham - operated group and model group both were injected by sodium chloride. Rats model were established by intraluminal method of middle cerebral artery occlusion( MCAO )after intraperitoneal injecting for one hour on the 5th day. After ischemia for 3 hours, all animals were reperfused for 24 hours and were killed. The rats' nerve function behaviour was observed and activities of SOD, GSH, GSH - PX and MDA in cerebral tissue were determined. Results Compared with that in model group, nerve function behaviour was obviously relieved, the activities of SOD, GSH and GSH - PX were elevated

  13. Geographical variation in the genetic diversity and composition of the endangered queen conch Strombus gigas (Mesogastropoda: Strombidae) from Yucatán, México.

    Science.gov (United States)

    Pérez-Enriquez, Ricardo; Garcia-Rodriguez, Francisco Javier; Mendoza-Carrion, Gabriela; Padilla, Claudia

    2011-09-01

    In Mexico and elsewhere in the Caribbean, the queen conch Strombus gigas is an endangered species. Understanding the genetic connectivity of their populations will support management strategies for long-term conservation of the species. Genetic diversity and population differentiation was assessed from samples collected at Banco Chinchorro and Isla Cozumel in the Mexican Caribbean and at Arrecife Alacranes in the Gulf of Mexico. Samples were obtained from the commercial capture at Banco Chinchorro (n = 50) and Isla Cozumel (n = 40) on March 2004. On November 2004, a non-invasive method for the Arrecife Alacranes sampling was applied, taking the hemolymph of live animals (n = 65) and releasing them to the wild. The mitochondrial DNA variation at two genes (COI and Cyt-b) was analyzed. Genetic diversity at the three locations ranged between 0.55-0.65 in COI and 0.87-0.94 in Cyt-b, showing no bottleneck evidences. A non-significant fixation index (F(ST) = 0.019, p = 0.161) and a Maximum Parsimony Network tree that did not show particular clades associated with any of the geographical locations, suggested a lack of statistically significant genetic differentiation among populations. Nevertheless, the cline patterns observed in both genetic diversity and haplotypic frequencies from Banco Chinchorro through Arrecife Alacranes, and the larger genetic distance between these locations from those between Isla Cozumel, Banco Chinchorro and Arrecife Alacranes, suggest the possibility of a pattern of isolation-by distance. The role of the main current systems over the potential genetic differences in S. gigas populations along the Mexican Caribbean, and the conservation management of S. gigas at these locations as discrete units is discussed. PMID:22017118

  14. Prevalencia del protozoario Perkinsus sp. en un cultivo de ostión japonés Crassostrea gigas en Sinaloa, México

    Directory of Open Access Journals (Sweden)

    Lizeth Carolina Villanueva-Fonseca

    2013-11-01

    Full Text Available Crassostrea gigas es un molusco bivalvo de gran importancia comercial. En el noroeste de México su producción es afectada por mortalidades cuyo origen infeccioso no ha sido determinado claramente. En este trabajo se determinó la prevalencia e intensidad de la infección por Perkinsus sp. en un cultivo de C. gigas en el ciclo 2011-2012. El cultivo se hizo en un sistema de línea suspendida con densidades de 28 y 42 ostiones/canasta y se determinó un tamaño de muestra de 30 ostiones por mes. La detección de Perkinsus sp. se hizo de acuerdo a los protocolos de la Organización Mundial de Sanidad Animal (OIE para Medio Fluido de Tioglicolato y PCR. Con ambos métodos se determinó la prevalencia de Perkinsus sp., que varió entre 3,3 y 40%. La intensidad de la infección estuvo en niveles 1 y 2, de acuerdo a la escala de Mackin. La mortalidad acumulativa en las densidades de 28 y 42 ostiones por canasta fue del 4 y 6%, respectivamente. Las mayores mortalidades del ostión y las mayores prevalencias de Perkinsus sp. ocurrieron en septiembre (2,7 y 16,6% y octubre (1,5 y 23,3%, respectivamente, cuando la temperatura fue alta. En conclusión, Perkinsus sp. fue detectado en un cultivo de C. gigas en el estero La Pitahaya con prevalencia moderada, baja intensidad de infección y mayor presencia en los meses más calurosos del ciclo de cultivo.

  15. Biodisponibilidade de zinco de ostras (Crassostrea gigas cultivadas em fl orianópolis / SC
    bioavailability of oysters (crassostrea gigas cultivated in Florianopólis / SC

    Directory of Open Access Journals (Sweden)

    R. CAETANO

    2010-05-01

    Full Text Available

    O objetivo deste trabalho foi avaliar a biodisponibilidade do zinco presente nas ostras Crassostrea gigas cultivadas na região de Florianópolis, SC em ratas adultas (Rattus norvegicus, pois nessa região as ostras são fontes de zinco biodisponível. Foi realizado ensaio biológico durante 49 dias, sendo que os 24 animais foram distribuídos em três grupos: G1: dieta controle (AIN-93M, G2: dieta isenta de zinco (AIN-93M modifi cada; G3: dieta isenta de zinco e acrescida de ostras. Ao fi nal do experimento foram coletados os fêmures dos animais para análise do teor de zinco, por espectrofotometria de absorção atômica. As ostras in natura apresentaram 4,38mg% de zinco. Quanto ao teor de zinco no fêmur, os grupos G1 (246,62 ± 9,97μg Zn/g osso e G3 (221,41 ± 15,80 μg apresentaram elevadas concentrações (p < 0,05 quando comparados ao grupo G0 (155,0 ± 32,80 μg e G2 (110,12 ± 32,88 μg.

  16. Evaluación de la densidad y alimentación en el desempeño reproductivo del pirarucu arapaima gigas en cautiverio

    OpenAIRE

    Franco Rojas, Hugo Hernán

    2011-01-01

    Arapaima gigas, nativo de la cuenca amazónica es uno de los peces de agua dulce de mayor tamaño del mundo, es llamado Paiche en Perú y Pirarucú en Brasil y Colombia. Para reducir la sobrepesca ejercida sobre el Pirarucú se han desarrollado protocolos para su producción en cautiverio y la reproducción de esta especie ha sido reportada en condiciones controladas. Los reportes existentes en la literatura sobre el manejo de reproductores para la obtención de crías producidas en cautiverio no son ...

  17. Effect of culture depth on the proximate composition and reproduction of the Pacific oyster, Crassostrea gigas from Gosung Bay, Korea

    OpenAIRE

    Ngo, T.T.T.; Kanga, S.-G.; Kang, D.-H.; Sorgeloos, P.; Choi, K.-S.

    2006-01-01

    We investigated seasonal variation in the reproductive output and proximate composition of tissues (protein, lipid, and carbohydrate) of the Pacific oyster, Crassostrea gigas Thunberg, at the top (0–2 m) and bottom (3–5 m) of a long-line suspended culture in Gosung Bay, Korea. The water temperature was 2–3 °C higher at the surface than at the bottom from early spring to mid-summer. The chlorophyll a level was also higher at the surface during March and April, when a spring phytoplankton bloom...

  18. Étude de la capacité antioxydante en lien avec la reproduction chez l'huître creuse Crassostrea gigas

    OpenAIRE

    Béguel, Jean-Philippe

    2012-01-01

    Le "coût de la reproduction" est un concept qui définit qu'un investissement à la reproduction élevé a un prix qui se paye ultérieurement par une accélération de la sénescence. Cela peut notamment traduire des compromis entre la reproduction et d'autres fonctions physiologiques comme la défense antioxydante. Chez l'huître creuse Crassostrea gigas, la reproduction représente une fonction physiologique majeure. Dans le cadre des études effectuées pour comprendre les mortalités estivales affecta...

  19. Relaciones ontogénicas y espacio-temporales en la dieta del calamar gigante (Dosidicus gigas) en Perú, utilizando un Modelo Aditivo Generalizado

    OpenAIRE

    Alegre Norza Sior, Ana Renza Paola

    2011-01-01

    El calamar gigante Dosidicus gigas (d'Orbigny, 1835) es un depredador importante en el ecosistema del Perú. Se postula que el papel del calamar gigante varía teniendo en cuenta la talla, tiempo, hora, temperatura y distribución espacial. Para comprobar esta hipótesis se aplicó un modelo aditivo generalizado (GAM) en datos biológicos de alimentación de 4178 calamares gigantes capturados por la flota industrial pesquera a lo largo del litoral peruano (3ºS a 18ºS) desde 2 a 299 millas náuticas (...

  20. Tracking habitat and resource use for the jumbo squid Dosidicus gigas : a stable isotope analysis in the Northern Humboldt Current System

    OpenAIRE

    Arguelles, J.; Lorrain, Anne; Cherel, Y; Graco, M.; Tafur, R.; Alegre, A; Espinoza, P.; Taipe, A.; Ayon, P.; Bertrand, Arnaud

    2012-01-01

    To determine the habitat and resource use of Dosidicus gigas in the Northern Humboldt Current System, we analysed carbon and nitrogen stable isotopes of 234 individuals collected during 2008-2010. Large variations in mantle stable isotope ratios were recorded, with values ranging from -19.1 to -15.1 pour mille (delta C-13) and from 7.4 to 20.5 pour mille (delta N-15). Most of the variation was explained by latitude, followed by distance to shelf break for carbon and by squid size for nitrogen...

  1. Distribución de Tallas y Condición Reproductiva del Calamar Gigante Dosidicus Gigas (D'Orbigny, 1835) en el Golfo de California

    OpenAIRE

    Velázquez Abunader, J.I.; Nevárez Martínez, M.O.; Hernández Herrera, Agustin

    2010-01-01

    Se analizaron cambios en la distribución de tallas, número de cohortes y condición reproductiva del calamar gigante Dosidicus gigas utilizando muestras provenientes de siete cruceros oceanográficos de investigación, efectuados en la región central del Golfo de California, México de 1997 a 2008. En todas las estaciones se muestrearon hasta 25 ejemplares registrando longitud del manto, sexo y fase de madurez gonádica y cuando la captura lo permitió, se realizó un muestreo masivo de 100 ejemplar...

  2. Population size of the jumbo squid Dosidicus gigas in the central Gulf of California, Mexico, based on mark-recapture data

    OpenAIRE

    Morales Bojorquez, Enrique; Hernández Herrera, Agustin; Nevárez Martínez, Manuel O; Díaz Uribe, Juan Gabriel

    2012-01-01

    The use of mark-recapture data can be an alternative to other methods for estimating abundance of the jumbo squid Dosidicus gigas and can be used when catch-per-unit-effort data applied to depletion models or estimates from survey research are not available. Two mark-recapture events were analyzed in the central Gulf of California, Mexico, during October 2001 and April 2002 to assess the status of jumbo squid. Results from October 2001 yielded a population size of 20.2 million squid with a 95...

  3. The Giga Bit Transceiver based Expandable Front-End (GEFE)—a new radiation tolerant acquisition system for beam instrumentation

    International Nuclear Information System (INIS)

    The Giga Bit Transceiver based Expandable Front-End (GEFE) is a multi-purpose FPGA-based radiation tolerant card. It is foreseen to be the new standard FMC carrier for digital front-end applications in the CERN BE-BI group. Its intended use ranges from fast data acquisition systems to slow control installed close to the beamlines, in a radioactive environment exposed to total ionizing doses of up to 750 Gy. This paper introduces the architecture of the GEFE, its features as well as examples of its application in different setups

  4. The Giga Bit Transceiver based Expandable Front-End (GEFE)—a new radiation tolerant acquisition system for beam instrumentation

    Science.gov (United States)

    Barros Marin, M.; Boccardi, A.; Donat Godichal, C.; Gonzalez, J. L.; Lefevre, T.; Levens, T.; Szuk, B.

    2016-02-01

    The Giga Bit Transceiver based Expandable Front-End (GEFE) is a multi-purpose FPGA-based radiation tolerant card. It is foreseen to be the new standard FMC carrier for digital front-end applications in the CERN BE-BI group. Its intended use ranges from fast data acquisition systems to slow control installed close to the beamlines, in a radioactive environment exposed to total ionizing doses of up to 750 Gy. This paper introduces the architecture of the GEFE, its features as well as examples of its application in different setups.

  5. 正交设计优化当归多糖的定量分析方法%Optimal Quantitative Analysis Method for Polysaccharide in Angelica Sinensis with Orthogonal Design

    Institute of Scientific and Technical Information of China (English)

    陈丽萍; 刘雄; 夏鹏飞; 樊秦; 赵磊

    2015-01-01

    Objective To optimize the detection condition of coloration method with phenol- sulphuric acid for polysaccharide in Angelica Sinensis. Methods The glucose content of reference substance was used as a parameter, and the coloration method with phenol-sulphuric acid was used to detect the best coloration method with 483 nm wave length and optimized with the L9 (34 ) orthogonal design. Results The concentrated sulfuric acid and phenol volumes had signifi-cant effects on detecting polysaccharide content. The best coloration method for polysaccharide was 1. 5 ml phenol, 7 ml concentrated sulfuric acid, 100℃ reactive temperature, 10 min reactive time, 0. 005-0. 02 mg/mL linear range, 101. 33%average recovery and 1. 22% RSD (relative standard deviation). Conclusion The phenolsulphuric is rapid, simple and accurate with good repeatability, and can been applied in content detection of polysaccharide in Angelica Sinensis.%目的 优化当归多糖苯酚-硫酸显色法的测定条件. 方法 采用苯酚-硫酸显色法,以对照品葡萄糖的含量为考察指标,检测波长为483 nm,按L9 (34 )正交试验设计筛选最佳显色条件. 结果 浓硫酸和苯酚用量对多糖含量测定的影响较显著,优选出的多糖最佳显色条件为苯酚1. 5 ml、浓硫酸7 ml、反应温度100℃、反应时间为10 min,线性范围为0. 005~0. 02 mg/ml,平均回收率为101. 3%,相对标准偏差为1. 22%. 结论 苯酚硫酸法快速、简便,准确性高、重复性好,可适用于当归多糖的含量测定.

  6. Gills are an initial target of zinc oxide nanoparticles in oysters Crassostrea gigas, leading to mitochondrial disruption and oxidative stress

    International Nuclear Information System (INIS)

    Graphical abstract: - Highlights: • ZnONP exposure causes an initial accumulation of zinc in gills and later in digestive gland. • Zinc burden occurs by ZnONP endocytosis or uptake of ionic zinc after dissociation. • ZnONP exposure disrupts mitochondrial ultrastructure in both tissues. • Mitochondrial damage and oxidative stress are major features of ZnONP acute toxicity. - Abstract: The increasing industrial use of nanomaterials during the last decades poses a potential threat to the environment and in particular to organisms living in the aquatic environment. In the present study, the toxicity of zinc oxide nanoparticles (ZnONP) was investigated in Pacific oysters Crassostrea gigas. The nanoscale of ZnONP, in vehicle or ultrapure water, was confirmed, presenting an average size ranging from 28 to 88 nm. In seawater, aggregation was detected by TEM and DLS analysis, with an increased average size ranging from 1 to 2 μm. Soluble or nanoparticulated zinc presented similar toxicity, displaying a LC50 (96 h) around 30 mg/L. High zinc dissociation from ZnONP, releasing ionic zinc in seawater, is a potential route for zinc assimilation and ZnONP toxicity. To investigate mechanisms of toxicity, oysters were treated with 4 mg/L ZnONP for 6, 24 or 48 h. ZnONP accumulated in gills (24 and 48 h) and digestive glands (48 h). Ultrastructural analysis of gills revealed electron-dense vesicles near the cell membrane and loss of mitochondrial cristae (6 h). Swollen mitochondria and a more conspicuous loss of mitochondrial cristae were observed after 24 h. Mitochondria with disrupted membranes and an increased number of cytosolic vesicles displaying electron-dense material were observed 48 h post exposure. Digestive gland showed similar changes, but these were delayed relative to gills. ZnONP exposure did not greatly affect thiol homeostasis (reduced and oxidized glutathione) or immunological parameters (phagocytosis, hemocyte viability and activation and total hemocyte

  7. Impact of minimum catch size on the population viability of Strombus gigas (Mesogastropoda: Strombidae) in Quintana Roo, Mexico.

    Science.gov (United States)

    Peel, Joanne R; Mandujano, María del Carmen

    2014-12-01

    The queen conch Strombus gigas represents one of the most important fishery resources of the Caribbean but heavy fishing pressure has led to the depletion of stocks throughout the region, causing the inclusion of this species into CITES Appendix II and IUCN's Red-List. In Mexico, the queen conch is managed through a minimum fishing size of 200 mm shell length and a fishing quota which usually represents 50% of the adult biomass. The objectives of this study were to determine the intrinsic population growth rate of the queen conch population of Xel-Ha, Quintana Roo, Mexico, and to assess the effects of a regulated fishing impact, simulating the extraction of 50% adult biomass on the population density. We used three different minimum size criteria to demonstrate the effects of minimum catch size on the population density and discuss biological implications. Demographic data was obtained through capture-mark-recapture sampling, collecting all animals encountered during three hours, by three divers, at four different sampling sites of the Xel-Ha inlet. The conch population was sampled each month between 2005 and 2006, and bimonthly between 2006 and 2011, tagging a total of 8,292 animals. Shell length and lip thickness were determined for each individual. The average shell length for conch with formed lip in Xel-Ha was 209.39 ± 14.18 mm and the median 210 mm. Half of the sampled conch with lip ranged between 200 mm and 219 mm shell length. Assuming that the presence of the lip is an indicator for sexual maturity, it can be concluded that many animals may form their lip at greater shell lengths than 200 mm and ought to be considered immature. Estimation of relative adult abundance and densities varied greatly depending on the criteria employed for adult classification. When using a minimum fishing size of 200 mm shell length, between 26.2% and up to 54.8% of the population qualified as adults, which represented a simulated fishing impact of almost one third of the

  8. Gills are an initial target of zinc oxide nanoparticles in oysters Crassostrea gigas, leading to mitochondrial disruption and oxidative stress

    Energy Technology Data Exchange (ETDEWEB)

    Trevisan, Rafael; Delapedra, Gabriel; Mello, Danielle F.; Arl, Miriam [Department of Biochemistry, Federal University of Santa Catarina, 88040-900 Florianópolis, SC (Brazil); Schmidt, Éder C. [Department of Cell Biology, Embryology and Genetic, Federal University of Santa Catarina, 88049-900 Florianópolis, SC (Brazil); Meder, Fabian; Monopoli, Marco [Centre for Bionano Interactions, University College Dublin, Dublin (Ireland); Cargnin-Ferreira, Eduardo [Federal Institute of Santa Catarina, Campus Garopaba, Laboratory of Histological Markers, 88495-000 Garopaba, SC (Brazil); Bouzon, Zenilda L. [Department of Cell Biology, Embryology and Genetic, Federal University of Santa Catarina, 88049-900 Florianópolis, SC (Brazil); Fisher, Andrew S. [School of Geography, Earth and Environmental Sciences, University of Plymouth, PL4 8AA Plymouth (United Kingdom); Sheehan, David [Department of Biochemistry, University College Cork, Cork (Ireland); Dafre, Alcir L., E-mail: alcir.dafre@ufsc.br [Department of Biochemistry, Federal University of Santa Catarina, 88040-900 Florianópolis, SC (Brazil)

    2014-08-15

    Graphical abstract: - Highlights: • ZnONP exposure causes an initial accumulation of zinc in gills and later in digestive gland. • Zinc burden occurs by ZnONP endocytosis or uptake of ionic zinc after dissociation. • ZnONP exposure disrupts mitochondrial ultrastructure in both tissues. • Mitochondrial damage and oxidative stress are major features of ZnONP acute toxicity. - Abstract: The increasing industrial use of nanomaterials during the last decades poses a potential threat to the environment and in particular to organisms living in the aquatic environment. In the present study, the toxicity of zinc oxide nanoparticles (ZnONP) was investigated in Pacific oysters Crassostrea gigas. The nanoscale of ZnONP, in vehicle or ultrapure water, was confirmed, presenting an average size ranging from 28 to 88 nm. In seawater, aggregation was detected by TEM and DLS analysis, with an increased average size ranging from 1 to 2 μm. Soluble or nanoparticulated zinc presented similar toxicity, displaying a LC{sub 50} (96 h) around 30 mg/L. High zinc dissociation from ZnONP, releasing ionic zinc in seawater, is a potential route for zinc assimilation and ZnONP toxicity. To investigate mechanisms of toxicity, oysters were treated with 4 mg/L ZnONP for 6, 24 or 48 h. ZnONP accumulated in gills (24 and 48 h) and digestive glands (48 h). Ultrastructural analysis of gills revealed electron-dense vesicles near the cell membrane and loss of mitochondrial cristae (6 h). Swollen mitochondria and a more conspicuous loss of mitochondrial cristae were observed after 24 h. Mitochondria with disrupted membranes and an increased number of cytosolic vesicles displaying electron-dense material were observed 48 h post exposure. Digestive gland showed similar changes, but these were delayed relative to gills. ZnONP exposure did not greatly affect thiol homeostasis (reduced and oxidized glutathione) or immunological parameters (phagocytosis, hemocyte viability and activation and total

  9. Transcriptomic profiling of gametogenesis in triploid Pacific Oysters Crassostrea gigas: towards an understanding of partial sterility associated with triploidy.

    Directory of Open Access Journals (Sweden)

    Nolwenn M Dheilly

    Full Text Available BACKGROUND: Triploidy can occur in many animal species but is often lethal. Among invertebrates, amphibians and fishes, triploids are viable although often sterile or infertile. Most triploids of the Pacific oyster Crassostrea gigas are almost sterile (named "3nβ" yet a low but significant proportion show an advanced gametogenesis (named "3nα". These oysters thus constitute an interesting model to study the effect of triploidy on germ cell development. We used microarrays to compare the gonad transcriptomes of diploid 2n and the abovementioned triploid 3nβ and 3nα male and female oysters throughout gametogenesis. RESULTS: All triploids displayed an upregulation of genes related to DNA repair and apoptosis and a downregulation of genes associated with cell division. The comparison of 3nα and 3nβ transcriptomes with 2n revealed the likely involvement of a cell cycle checkpoint during mitosis in the successful but delayed development of gonads in 3nα individuals. In contrast, a disruption of sex differentiation mechanisms may explain the sterility of 3nβ individuals with 3nβ females expressing male-specific genes and 3nβ males expressing female-specific genes. CONCLUSIONS: The disruption of sex differentiation and mitosis may be responsible for the impaired gametogenesis of triploid Pacific oysters. The function of the numerous candidate genes identified in our study should now be studied in detail in order to elucidate their role in sex determination, mitosis/meiosis control, pachytene cell cycle checkpoint, and the control of DNA repair/apoptosis.

  10. Mitochondrial activity, hemocyte parameters and lipid composition modulation by dietary conditioning in the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Dudognon, Tony; Lambert, Christophe; Quere, Claudie; Auffret, Michel; Soudant, Philippe; Kraffe, Edouard

    2014-04-01

    Several parameters can affect membrane lipid composition in bivalves, including diet. Although two fatty acids (FA) 22:6n-3 and 20:5n-3 are essential membrane components, they are sparingly synthesized by bivalves and must be obtained from their diet. Here, effects of dietary modifications of membrane lipid composition were studied at both cellular and subcellular levels in the oyster Crassostrea gigas. To this end, we compared oysters fed two monoalgal diets that differed markedly in their FA composition and a mix of both. As expected, algae impacted phospholipids, in particular 22:6n-3 and 20:5n-3, reflecting differences of dietary microalgae FA composition. Meantime, total saturated FA, total monounsaturated FA, total polyunsaturated FA and total non-methylene-interrupted FA varied little and phospholipid class composition was only slightly affected by diets. Measures made in hemocytes indicated that only mitochondrial membrane potential was affected by diets. Total ROS production as well as mitochondrial superoxide production did not differ with diet. There was no difference in phosphorylating (state 3) and non-phosphorylating (state 4) rates of oxygen consumption rates or in cytochrome c oxidase activity of mitochondria isolated from gills between the three diets. Similarly, neither cytochromes a, b, c or c1 content nor citrate synthase activities were changed, suggesting that number and morphology of mitochondria were not affected by dietary treatment. These results suggest that oysters could possess high homeostatic capabilities, at both cellular and subcellular levels, to minimize the effect of dietary FA and related membrane lipid FA modifications on mitochondrial functions. These capabilities could be a means to face variations in diet composition in their natural environment and to preserve important oyster physiological functions such as growth and reproduction. PMID:24441864

  11. Expression Characterization of Stress Genes Under High and Low Temperature Stresses in the Pacific Oyster, Crassostrea gigas.

    Science.gov (United States)

    Zhu, Qihui; Zhang, Linlin; Li, Li; Que, Huayong; Zhang, Guofan

    2016-04-01

    As a characteristic sessile inhabitant of the intertidal zone, the Pacific oyster Crassostrea gigas occupies one of the most physically stressful environments on earth. With high exposure to terrestrial conditions, oysters must tolerate broad fluctuations in temperature range. However, oysters' cellular and molecular responses to temperature stresses have not been fully characterized. Here, we analyzed oyster transcriptome data under high and low temperatures. We also identified over 30 key temperature stress-responsive candidate genes, which encoded stress proteins such as heat shock proteins and apoptosis-associated proteins. The expression characterization of these genes under short-term cold and hot environments (5 and 35 °C) and long-term cold environments (5 °C) was detected by quantitative real-time PCR. Most of these genes reached expression peaks during the recovery stage after 24 h of heat stress, and these genes were greatly induced around day 3 in long-term cold stress while responded little to short-term cold stress. In addition, in the second heat stress after 2 days of recovery, oysters showed milder expression in these genes and a lower mortality rate, which indicated the existence of plasticity in the oyster's response to heat stress. We confirmed that homeostatic flexibility and anti-apoptosis might be crucial centers of temperature stress responses in oysters. Furthermore, we analyzed stress gene families in 11 different species and found that the linage-specific expansion of stress genes might be implicated in adaptive evolution. These results indicated that both plasticity and evolution played an important role in the stress response adaptation of oysters. PMID:26746430

  12. Metabolic suppression during protracted exposure to hypoxia in the jumbo squid, Dosidicus gigas, living in an oxygen minimum zone.

    Science.gov (United States)

    Seibel, Brad A; Häfker, N Sören; Trübenbach, Katja; Zhang, Jing; Tessier, Shannon N; Pörtner, Hans-Otto; Rosa, Rui; Storey, Kenneth B

    2014-07-15

    The jumbo squid, Dosidicus gigas, can survive extended forays into the oxygen minimum zone (OMZ) of the Eastern Pacific Ocean. Previous studies have demonstrated reduced oxygen consumption and a limited anaerobic contribution to ATP production, suggesting the capacity for substantial metabolic suppression during hypoxic exposure. Here, we provide a more complete description of energy metabolism and explore the expression of proteins indicative of transcriptional and translational arrest that may contribute to metabolic suppression. We demonstrate a suppression of total ATP demand under hypoxic conditions (1% oxygen, PO2 =0.8 kPa) in both juveniles (52%) and adults (35%) of the jumbo squid. Oxygen consumption rates are reduced to 20% under hypoxia relative to air-saturated controls. Concentrations of arginine phosphate (Arg-P) and ATP declined initially, reaching a new steady state (~30% of controls) after the first hour of hypoxic exposure. Octopine began accumulating after the first hour of hypoxic exposure, once Arg-P breakdown resulted in sufficient free arginine for substrate. Octopine reached levels near 30 mmol g(-1) after 3.4 h of hypoxic exposure. Succinate did increase through hypoxia but contributed minimally to total ATP production. Glycogenolysis in mantle muscle presumably serves to maintain muscle functionality and balance energetics during hypoxia. We provide evidence that post-translational modifications on histone proteins and translation factors serve as a primary means of energy conservation and that select components of the stress response are altered in hypoxic squids. Reduced ATP consumption under hypoxia serves to maintain ATP levels, prolong fuel store use and minimize the accumulation of acidic intermediates of anaerobic ATP-generating pathways during prolonged diel forays into the OMZ. Metabolic suppression likely limits active, daytime foraging at depth in the core of the OMZ, but confers an energetic advantage over competitors that must

  13. Postmortem biochemical behavior of giant squid (Dosidicus gigas) mantle muscle stored in ice and its relation with quality parameters.

    Science.gov (United States)

    Márquez-Ríos, E; Morán-Palacio, E F; Lugo-Sánchez, M E; Ocano-Higuera, V M; Pacheco-Aguilar, R

    2007-09-01

    Several freshness and spoilage indicators were monitored to characterize the postmortem biochemistry of giant squid (Dosidicus gigas) mantle muscle. Squid samples were obtained directly from the sea and kept at 0 degrees C during a 15-d storage period. Data at zero time were obtained from cryogenically frozen samples at time of capture. The adenosine 5'-triphosphate (ATP) degradation followed a different pattern as compared with that from fish species. ATP was almost completely depleted at 24-h postcatch from 6.54 to <1 micromol/g, while at the same time Hx was the predominant catabolite with a concentration of 4 mumol/g, reaching 6.85 micromol/g at day 15. K-value data followed a logarithmic pattern with time instead of a linear one, with no change after day 3, thus reducing its suitability as a freshness index. The coefficient Hx/AMP seems to be an adequate alternative for this purpose due to its constant increment with time. The high NH4Cl content in mantle muscle (461.3 +/- 24.5 mg of NH4(+)/100 g) derived from its physiological importance for the species compromises the use of the distillation step of the TVB-N analysis commonly used as a spoilage index. This fact explains why the initially high value of TVB-N detected in mantle muscle (243.7 mg N/100 g) did not correlate with the initial low TMA-N content (1.5 +/- 0.1 mg/100 g of muscle). The results suggested that under the experimental conditions the shelf life of squid exceeds 15 d. PMID:17995632

  14. VALOR AGREGADO DE LAS ESPECIES Brycon erythropterum (SÁBALO, Colossoma macropomum (GAMITANA, Arapaima gigas (PAICHE y Agouti paca (MAJAS

    Directory of Open Access Journals (Sweden)

    Doylith Vásquez Jurafo

    2012-12-01

    Full Text Available El presente trabajo tiene como objetivo  la obtención de  productos mínimamente procesados (PMP de Brycon erythropterum (SÁBALO, Colossoma macropomum (GAMITANA, Arapaima gigas (PAICHE, y Agouti paca (MAJAS congelado y empacado al vacio. Para las especies piscícolas, se ha aplicado un diseño factorial de 32 con dos factores de estudios: concentración de NaCl en la solución osmótica con tres niveles (15, 20 y 25 % y temperatura de proceso  con tres niveles de estudio (5, 10 y 15 °C. Para el Agouti paca (majas se aplico un diseño factorial completamente aleatorizado con tres factores de estudio: tiempo de proceso (30, 60 y 90 minutos, método de ahumado (ahumado líquido y ahumado en caliente y tipo de corte del músculo (partes y filetes. Para trabajar se ha diseñado y montado un deshidratador Osmótico teniendo en cuenta, diámetro de tubería, deshidratador propiamente dicho con doble chaqueta, capacidad del deshidratador en función del volumen de la Salmuera.  Todos los productos se obtuvieron  en procesos con 10 °C y tiempos entre 30 min y  90 min. El tiempo de vida en almacenamiento en las evaluaciones de aroma y color en majas tienen una vida útil de 4 meses de almacenados a -18 °C. Los análisis microbiológicos realizados a los PMP no pasan los límites de la NTS Nº 071 MINSA/DIGESA V01.

  15. Parental exposure to the herbicide diuron results in oxidative DNA damage to germinal cells of the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Barranger, Audrey; Heude-Berthelin, Clothilde; Rouxel, Julien; Adeline, Béatrice; Benabdelmouna, Abdellah; Burgeot, Thierry; Akcha, Farida

    2016-02-01

    Chemical pollution by pesticides has been identified as a possible contributing factor to the massive mortality outbreaks observed in Crassostrea gigas for several years. A previous study demonstrated the vertical transmission of DNA damage by subjecting oyster genitors to the herbicide diuron at environmental concentrations during gametogenesis. This trans-generational effect occurs through damage to genitor-exposed gametes, as measured by the comet-assay. The presence of DNA damage in gametes could be linked to the formation of DNA damage in other germ cells. In order to explore this question, the levels and cell distribution of the oxidized base lesion 8-oxodGuo were studied in the gonads of exposed genitors. High-performance liquid chromatography coupled with UV and electrochemical detection analysis showed an increase in 8-oxodGuo levels in both male and female gonads after exposure to diuron. Immunohistochemistry analysis showed the presence of 8-oxodGuo at all stages of male germ cells, from early to mature stages. Conversely, the oxidized base was only present in early germ cell stages in female gonads. These results indicate that male and female genitors underwent oxidative stress following exposure to diuron, resulting in DNA oxidation in both early germ cells and gametes, such as spermatozoa, which could explain the transmission of diuron-induced DNA damage to offspring. Furthermore, immunostaining of early germ cells seems indicates that damages caused by exposure to diuron on germ line not only affect the current sexual cycle but also could affect future gametogenesis. PMID:26610786

  16. Cobalt-, zinc- and iron-bound forms of adenylate kinase (AK) from the sulfate-reducing bacterium Desulfovibrio gigas: purification, crystallization and preliminary X-ray diffraction analysis

    International Nuclear Information System (INIS)

    Adenylate kinase (AK) from D. gigas was purified and crystallized in three different metal-bound forms: Zn2+–AK, Co2+–AK and Fe2+–AK. Adenylate kinase (AK; ATP:AMP phosphotransferase; EC 2.7.4.3) is involved in the reversible transfer of the terminal phosphate group from ATP to AMP. AKs contribute to the maintenance of a constant level of cellular adenine nucleotides, which is necessary for the energetic metabolism of the cell. Three metal ions, cobalt, zinc and iron(II), have been reported to be present in AKs from some Gram-negative bacteria. Native zinc-containing AK from Desulfovibrio gigas was purified to homogeneity and crystallized. The crystals diffracted to beyond 1.8 Å resolution. Furthermore, cobalt- and iron-containing crystal forms of recombinant AK were also obtained and diffracted to 2.0 and 3.0 Å resolution, respectively. Zn2+–AK and Fe2+–AK crystallized in space group I222 with similar unit-cell parameters, whereas Co2+–AK crystallized in space group C2; a monomer was present in the asymmetric unit for both the Zn2+–AK and Fe2+–AK forms and a dimer was present for the Co2+–AK form. The structures of the three metal-bound forms of AK will provide new insights into the role and selectivity of the metal in these enzymes

  17. Cg-SoxE and Cg-β-catenin, two new potential actors of the sex-determining pathway in a hermaphrodite lophotrochozoan, the Pacific oyster Crassostrea gigas.

    Science.gov (United States)

    Santerre, Christelle; Sourdaine, Pascal; Adeline, Béatrice; Martinez, Anne-Sophie

    2014-01-01

    Sex determination is poorly known in mollusks, lophotrochozoa and most hermaphrodites. In the oyster Crassostrea gigas, an irregular successive hermaphrodite, sex determination may occur at the end of a gametogenetic cycle to prepare the next cycle. To investigate further into these aspects we have focused on orthologs of SoxE and β-catenin, key players of the male and female gonadic differentiation respectively in mammals. Based on phylogenetic analyses, Cg-SoxE, the oyster's SoxE ortholog, is closely related to vertebrate SoxE genes while Cg-β-catenin, the oyster's β-catenin ortholog, is classified amongst lophotrochozoa. The mRNA expression measured by qPCR in the gonadic area during a gametogenetic cycle is maximal for Cg-SoxE when sex is indiscernible and for Cg-β-catenin in mature females. Both expressions are localized from early germ cells to spermatocytes and pre-vitellogenic oocytes, and potentially in somatic cells. Cg-β-catenin is also expressed in vitellogenic oocytes. These actors may be involved in early oyster gonadic differentiation, which includes sex determination. Our results enhance the understanding of sex determination in C. gigas and in mollusks and they provide additional knowledge in compared genomics of reproduction and in molecular phylogeny. PMID:24120488

  18. Identification of Ras, Pten and p70S6K homologs in the Pacific oyster Crassostrea gigas and diet control of insulin pathway.

    Science.gov (United States)

    Jouaux, A; Franco, A; Heude-Berthelin, C; Sourdaine, P; Blin, J L; Mathieu, M; Kellner, K

    2012-03-01

    Insulin pathways were demonstrated from invertebrates to vertebrates to be involved in the regulation of numerous processes including storage metabolism and reproduction. In addition, insulin system may integrate variations of environmental conditions like dietary restrictions. In the Pacific oyster Crassostrea gigas, reproductive and storage compartments are closely intricated in the gonadal area and their respective development was found to be dependant of trophic conditions. For these reasons, C. gigas is an original and interesting model for investigating the role of insulin control in the balance between storage and reproduction and the integration of environmental parameters. On the basis of sequence conservation, we identified three potential elements of the oyster insulin pathway, Ras, Pten and p70S6K and we investigated their expression levels in various tissues. In the gonadal area, we used laser microdissection in order to precise the targeted contribution of insulin signaling to the restoration of storage tissue and to the control of vitellogenesis. Food deprivation during gametogenesis reinitiation stage led to reduced proliferations of gonia and also to modulate insulin signal by transcriptional activation of insulin pathway elements. PMID:22202600

  19. A preliminary analysis of trace-elemental signatures in statoliths of different spawning cohorts for Dosidicus gigas off EEZ waters of Chile

    Science.gov (United States)

    Liu, Bilin; Chen, Xinjun; Fang, Zhou; Hu, Song; Song, Qian

    2015-12-01

    We applied solution-based ICP-MS method to quantify the trace-elemental signatures in statoliths of jumbo flying squid, Dosidius gigas, which were collected from the waters off northern and central Chile during the scientific surveys carried out by Chinese squid jigging vessels in 2007 and 2008. The age and spawning date of the squid were back-calculated based on daily increments in statoliths. Eight elemental ratios (Sr/Ca, Ba/Ca, Mg/Ca, Mn/Ca, Na/Ca, Fe/Ca, Cu/Ca and Zn/Ca) were analyzed. It was found that Sr is the second most abundant element next to Ca, followed by Na, Fe, Mg, Zn, Cu, Ba and Mn. There was no significant relationship between element/Ca and sea surface temperature (SST) and sea surface salinity (SSS), although weak negative or positive tendency was found. MANOVA analysis showed that multivariate elemental signatures did not differ among the cohorts spawned in spring, autumn and winter, and no significant difference was found between the northern and central sampling locations. Classification results showed that all individuals of each spawned cohorts were correctly classified. This study demonstrates that the elemental signatures in D. gigas statoliths are potentially a useful tool to improve our understanding of its population structure and habitat environment.

  20. Effect of environmental impact to molecular expression of heat-shock protein (HSP70) in oyster Crassostrea gigas from Gamak bay, Korea.

    Science.gov (United States)

    Cho, Eun-Seob; Jeong, Hee-Dong

    2012-05-01

    The cDNA of Crassostrea gigas HSP70 was cloned and rapid amplification of cDNA (RACE) techniques were used. The full length of HSP70 cDNA was 2045 bp, consisting of a 5' terminal untranslated region (UTR) of 80 bp, a 3' terminal UTR 146 bp, and an open reading frame (ORF) of 1829 bp encoding deduced 620 amino acids. The HSP70 cDNA contained HSP70 family signatures, ATP-GTP binding site motif, tetrapeptide (GGMP) and conserved carboxyl terminal region (EEVD) at C-terminal of deduced amino acid sequence. BLAST analysis revealed that the HSP70 gene has an extreme similarity of 98.9% with C. gigas (AF144646). Northern blotting was used to examine the expression of HSP70 mRNA in the gill tissue of the oyster obtained from surface, middle and bottom layers. The HSP70 mRNA observed the samples taken from middle and bottom layers in September and February, but samples from the surface layer did not find a signal intensity of HSP70 mRNA transcript. Consequently, it seems that the oyster occurring middle and bottom layer have been stressed during the period of summer and winter, which is associated with the massive mortality in Gamak bay. PMID:23029911

  1. Paralytic Toxins Accumulation and Tissue Expression of α-Amylase and Lipase Genes in the Pacific Oyster Crassostrea gigas Fed with the Neurotoxic Dinoflagellate Alexandrium catenella

    Directory of Open Access Journals (Sweden)

    Mohamed Laabir

    2012-11-01

    Full Text Available The pacific oyster Crassostrea gigas was experimentally exposed to the neurotoxic Alexandrium catenella and a non-producer of PSTs, Alexandrium tamarense (control algae, at concentrations corresponding to those observed during the blooming period. At fixed time intervals, from 0 to 48 h, we determined the clearance rate, the total filtered cells, the composition of the fecal ribbons, the profile of the PSP toxins and the variation of the expression of two α-amylase and triacylglecerol lipase precursor (TLP genes through semi-quantitative RT-PCR. The results showed a significant decrease of the clearance rate of C. gigas fed with both Alexandrium species. However, from 29 to 48 h, the clearance rate and cell filtration activity increased only in oysters fed with A. tamarense. The toxin concentrations in the digestive gland rose above the sanitary threshold in less than 48 h of exposure and GTX6, a compound absent in A. catenella cells, accumulated. The α-amylase B gene expression level increased significantly in the time interval from 6 to 48 h in the digestive gland of oysters fed with A. tamarense, whereas the TLP gene transcript was significantly up-regulated in the digestive gland of oysters fed with the neurotoxic A. catenella. All together, these results suggest that the digestion capacity could be affected by PSP toxins.

  2. High resolution oxygen isotope and grayscale records of a medieval fossil giant clam(Tridacna gigas) in the South China Sea:physiological and paleoclimatic implications

    Institute of Scientific and Technical Information of China (English)

    YAN Hong; WANG Yuhong; SUN Liguang

    2014-01-01

    Mollusks are well known for their detailed recording of paleoenvironmental and paleoclimatic changes in their carbonate shells. In this study, we constructed 18-year blue color intensity and oxygen isotope profiles of a14C dated (AD 990±40) fossil giant clam,Tridacna gigas, from Shidao Island, South China Sea. Theδ18O profile of theT. gigas specimen displayed regular annual cycles and was probably controlled by seasonal variations of the climatic parameters. The blue color intensity profile showed good agreement with theδ18O series, and both had 18 clear annual cycles in accordance with the 18 visually identified annual growth bands. The annual shell growth rate determined from the blue color intensity and oxygen isotope profiles indicated that the annual shell increment of theTridacna specimen was stable after the onset of sexual ma-turity. Spectral analysis of theδ18O and blue color intensity time series suggested that the El Niño-Southern Oscillation (ENSO) period observed in the instrumental temperature and precipitation records of the South China Sea during the past 50 years also existed in medieval times. Our results showed that fossil giant clams could provide a good archive of historical intra-seasonal to decadal climate variations.

  3. Sub-chronic exposure to fluoxetine in juvenile oysters (Crassostrea gigas): uptake and biological effects.

    Science.gov (United States)

    Di Poi, Carole; Evariste, Lauris; Séguin, Alexis; Mottier, Antoine; Pedelucq, Julie; Lebel, Jean-Marc; Serpentini, Antoine; Budzinski, Hélène; Costil, Katherine

    2016-03-01

    The bioconcentration potential of fluoxetine (FLX) and its biological effects were investigated in juvenile Pacific oyster exposed for 28 days to environmentally relevant concentrations of FLX (1 ng L(-1), 100 ng L(-1) and up to 10 μg L(-1)). FLX bioaccumulated in oyster flesh resulting in 28-day bioconcentration factors greater than 2,000 and 10,000 by referring to wet and dry weights, respectively. Nevertheless, FLX did not induce oyster mortality, delayed gametogenesis, or lead to adverse histopathological alterations. At the two highest concentrations, despite non-optimal trophic conditions, FLX stimulated shell growth but only in a transient manner, suggesting a role of serotonin in the regulation of feeding and metabolism in bivalves. Those high concentrations seemed to drive bell-shaped responses of catalase and glutathione S-transferase activities throughout the exposure period, which may indicate the activation of antioxidant enzyme synthesis and then an enhanced catabolic rate or direct inhibition of those enzymes. However, no clear oxidative stress was detected because no strong differences in thiobarbituric acid-reactive substance (TBARS) content (i.e. lipid peroxidation) were observed between oyster groups, suggesting that cellular defence mechanisms were effective. These results demonstrate the importance of considering additional biomarkers of oxidative stress to obtain a comprehensive overview of the FLX-induced changes in marine bivalves exposed under realistic conditions. Considering the battery of biomarkers used, FLX appears to induce little or no effects on oyster physiology even at a concentration of 10 μg L(-1). These results do not confirm the lowest observed effect concentration (LOEC) values reported by some authors in other mollusc species. PMID:25315935

  4. 木瓜蛋白酶嫩化秘鲁鱿鱼肉工艺条件的研究%Study on optimization for tenderization conditions of Dosidicus gigas meat by papain

    Institute of Scientific and Technical Information of China (English)

    郑贤孟; 杨文鸽; 徐大伦

    2013-01-01

    Using the shearing force and concentration of soluble protein(CSP) as indexes,the tenderization of Dosidicus gigas meat by papain was studied,and the suitable tenderization conditions of Dosidicus gigas meat were optimizated through single factor and orthogonal experiment.The results indicated that the suitable technological conditions for tenderization of Dosidicus gigas meat were as follows:papain concentration 1%,soaking time 40min,temperature 50℃ and pH7.0.Under these conditions,the shearing force of Dosidicus gigas meat was up to 2060.141g.%以鱿鱼肉的剪切力和可溶性蛋白含量(CSP)为指标,通过单因素和正交实验优化木瓜蛋白酶嫩化秘鲁鱿鱼肉的工艺条件.结果显示秘鲁鱿鱼肉适宜的嫩化条件为:木瓜蛋白酶浓度1%、处理时间40min、温度50℃、pH7.0,在此条件下鱿鱼肉得到嫩化,其剪切力为2060.141g.

  5. 中国伞形科当归属及相关类群毛状体和果实结构的系统学价值%Trichomes and fruit structures of Angelica and related genera of the family Apiaceae and their taxonomic significance

    Institute of Scientific and Technical Information of China (English)

    王宇婷; 刘玫; 程薪宇

    2015-01-01

    深入研究了当归属及其相关7属,古当归属,高山芹属,柳叶芹属,独活属,欧当归属,山芹属及前胡属毛状体和果实结构。结果显示毛状体及果实结构(如:毛状体细胞,翅,油管,维管束,中果皮,内果皮,结合面及结晶)可以用于区分当归属及其相关类群。滇南当归及隆萼当归应从当归属移入独活属,其余当归属物种分为结合面宽及结合面窄两组,前者与前胡属较为相似,但与独活属差别较大,后者与古当归属,高山芹属,柳叶芹属,欧当归属有相似之处。支持分子系统学揭示的当归属不是个自然类群,当归属与前胡属共同位于当归分支,而独活属位于独活分支。山芹属果实结构与其他属不同,翅的中果皮无细胞,且伴生油管位于维管束内侧,为分子系统学显示此属与高山芹属,柳叶芹属,及欧当归属亲缘关系较远提供了形态学依据。%Trichomes and fruit structures of Angelica and seven related genera (Archangelica,Coelopleurum, Czernaevia,Heracleum,Levisticum,Ostericum,and Peucedanum)were studied.Differences in the trichome and fruit structures (e.g.wing,vitta,vascular bundle,mesocarp,endocarp,commissural side,and crystals) were found to provide useful characters to distinguish between Angelica and related taxa.Angelica austro-yun-nanensis and A.oncosepala should be moved to the genus Heracleum,and other taxa of the Angelica group could be divided two groups,one with a wide and the other narrow commisure.In the former the fruit struc-tures of the taxa are similar to those of Peucedanum,and differ from those of Heracleum and in the latter they are similar to those of Archangelica,Coelopleurum,Czernaevia,Levisticum,and Ostericum.This study sup-ports the findings from molecular research that as currently defined the Angelicaceae is not a natural group. Angelica and Peucedanum should be placed in an Angelica clade and

  6. Stanols as a tool to track the origin of microbial contamination of oysters, Crassostrea gigas, in shellfish areas.

    Science.gov (United States)

    Harrault, Loïc; Jardé, Emilie; Jeanneau, Laurent; Petitjean, Patrice

    2013-04-01

    Runoff of cattle manures (cows, pigs, sheeps) or discharge of effluent from wastewater treatment plants (WWTP) into aquatic ecosystems can lead to microbiological contamination of waters and living organisms. In coastal ecosystems and particularly in shellfish harvesting areas, the presence of pathogen microorganisms in waters induces fecal contamination of filter feeding bivalves (oysters, mussels, scallops…), therefore leading to human health risks associated to the consumption of these contaminated organisms. Watershed management plans that aim at limiting these risks require the development of tools able to identify fecal contamination sources. The fecal indicator bacteria used in the regulations to determine fecal contamination are not source specific since they are found in the feces of most warm-blooded animals. Thus, microbiological biomarkers have been developed in association with chemical biomarkers as Microbial Source Tracking (MST) methods. Fecal stanols, by-products of sterols obtained by human and animal microbial gut flora, are found in considerable amounts in feces with different relative proportions depending on their animal or human source. Recently, in association with microbiological biomarkers, the stanol fingerprint of contaminated waters has been successfully used to determine the main source of fecal contamination (cow, pig or human sources) in rural watersheds (Brittany, France). Up to now, the use of the stanol fingerprint to track the fecal contamination in shellfish tissues, especially bivalves, has been limited to the analysis of coprostanol, a stanol commonly associated to human contamination. Therefore, whether the stanol fingerprint can be used as a MST method in bivalves or not is still unknown. The first aim of this study was to compare several organic extraction procedures of stanols in the oyster Crassostrea gigas to determine a reliable method for stanol fingerprint analysis in bivalves. Solvent extraction and purification

  7. Peroral Chinese angelica decoction combined with external Baiban liquid in the treatment of 56 pa-tients with leukoplakia of the vulva%内服当归饮子加味联合白斑洗剂治疗外阴白色病变52例

    Institute of Scientific and Technical Information of China (English)

    周燕媛; 胡红; 任强强

    2015-01-01

    Objective:To assess the efficacy of Chinese angelica decoction combined with external Baiban liquid in the treatment of patients with leukoplakia of the vulva. Methods:One hundred and four patients were divided into the treatment group ( 52 patients) and the control group ( 52 patients) . The patients in the treat-ment group were treated with Chinese angelica decoction combined with external Baiban liquid and those in the control group were treated with vitamin B1, vitamin A and external halide betamethasone. Results:The effec-tive rate in the treatment group was 84.62%, which was higher than that in the control group (67.30%), with a significant difference (P<0.05). Conclusion: Chinese angelica decoction combined with external Baiban liquid is effective in the treatment of leukoplakia of the vulva.%目的::评价内服当归饮子加味联合白斑洗剂治疗外阴白色病变的临床疗效。方法:将104例患者随机分为两组,治疗组(52例)给予中药当归饮子加味内服及白斑洗剂外洗;对照组(52例)予口服维生素 B1、维生素 A及外用卤米松软膏。结果:治疗组总有效率为84.62%高于对照组(67.30%),差异有统计学意义(P<0.05)。结论:中药当归饮子加味联合白斑洗剂外洗治疗外阴白色病变疗效显著。

  8. Sclerochronology - a highly versatile tool for mariculture and reconstruction of life history traits of the queen conch, textit{Strombus gigas} (Gastropoda)

    Science.gov (United States)

    Radermacher, Pascal; Schöne, Bernd R.; Gischler, Eberhard; Oschmann, Wolfgang; Thébault, Julien; Fiebig, Jens

    2010-05-01

    The shell of the queen conch Strombus gigas provides a rapidly growing palaeoenvironmental proxy archive, allowing the detailed reconstruction of important life-history traits such as ontogeny, growth rate and growth seasonality. In this study, modern sclerochronological methods are used to cross-date the palaeotemperatures derived from the shell with local sea surface temperature (SST) records. The growth history of the shell suggests a bimodal seasonality in growth, with the growing season confined to the interval between April and November. In Glovers Reef, offshore Belize, the queen conch accreted shell carbonate at rates of up to 6 mm day-1 during the spring (April-June) and autumn (September-November). However a reduced period of growth occurred during the mid-summer months (July-August). The shell growth patterns indicate a positive response to annual seasonality with regards to precipitation. It seems likely that when precipitation levels are high, food availability is increased as the result of nutrient input to the ecosystem in correspondence with an increase in coastal runoff. Slow growth rates occur when precipitation, and as a consequence riverine runoff, is low. The SST however appears to influence growth only on a secondary level. Despite the bimodal growing season and the winter cessation in growth, the growth rates reconstructed here from two S. gigas shells are among the fastest yet reported for this species. The S. gigas specimens from Belize reached their final shell height (of 22.7 and 23.5 cm in distance between the apex and the siphonal notch) at the transition to adulthood in just 2 years. The extremely rapid growth as observed in this species permits detailed, high-resolution reconstructions of life-history traits where sub-daily resolutions can be achieved with ease. The potential for future studies has yet to be further explored. Queen conch sclerochronology provides an opportunity to recover extremely high-resolution palaeotemperature

  9. Analysis of Giga-size Earth Observation Data in Open Source GRASS GIS 7 - from Desktop to On-line Solutions.

    Science.gov (United States)

    Stepinski, T. F.; Mitasova, H.; Jasiewicz, J.; Neteler, M.; Gebbert, S.

    2014-12-01

    GRASS GIS is a leading open source GIS for geospatial analysis and modeling. In addition to being utilized as a desktop GIS it also serves as a processing engine for high performance geospatial computing for applications in diverse disciplines. The newly released GRASS GIS 7 supports big data analysis including temporal framework, image segmentation, watershed analysis, synchronized 2D/3D animations and many others. This presentation will focus on new GRASS GIS 7-powered tools for geoprocessing giga-size earth observation (EO) data using spatial pattern analysis. Pattern-based analysis connects to human visual perception of space as well as makes geoprocessing of giga-size EO data possible in an efficient and robust manner. GeoPAT is a collection of GRASS GIS 7 modules that fully integrates procedures for pattern representation of EO data and patterns similarity calculations with standard GIS tasks of mapping, maps overlay, segmentation, classification(Fig 1a), change detections etc. GeoPAT works very well on a desktop but it also underpins several GeoWeb applications (http://sil.uc.edu/ ) which allow users to do analysis on selected EO datasets without the need to download them. The GRASS GIS 7 temporal framework and high resolution visualizations will be illustrated using time series of giga-size, lidar-based digital elevation models representing the dynamics of North Carolina barrier islands over the past 15 years. The temporal framework supports efficient raster and vector data series analysis and simplifies data input for visual analysis of dynamic landscapes (Fig. 1b) allowing users to rapidly identify vulnerable locations, changes in built environment and eroding coastlines. Numerous improvements in GRASS GIS 7 were implemented to support terabyte size data processing for reconstruction of MODIS land surface temperature (LST) at 250m resolution using multiple regressions and PCA (Fig. 1c) . The new MODIS LST series (http://gis.cri.fmach.it/eurolst/) includes

  10. Approche comparative de la variabilité et de la structuration génétique chez deux espèces d'huîtres cultivées (Crassostrea gigas et Ostrea edulis) présentant des stratégies reproductives et des histoires contrastées

    OpenAIRE

    Boudry, Pierre; Launey, Sophie; Huvet, Arnaud

    1998-01-01

    The two common oyster species cultivated in Europe are the flat oyster Ostrea edulis and the cupped oyster Crassostrea gigas. These species have two really different reproduction strategies (oviparity versus larviparity) and histories (natural distribution versus introductions linked to oyster culture). We used microsatellite markers to compare the observed variabilities Europe wide. O. edulis presents a lower rate of alleles per locus than C. gigas. The observed structuration levels (global ...

  11. 明日叶叶水溶性总黄酮提纯工艺%Extraction and Purification of Water-Soluble Flavonoids from Angelica keiskei Koidzumi Leaves

    Institute of Scientific and Technical Information of China (English)

    郭晓青; 吴金鸿; 周焱富; 王正武; 杨科峰

    2012-01-01

    比较水浴加热、直接加热煮沸、微波辅助浸提3种水浸提取方法,确定明日叶叶总黄酮提取率最高的水浸提工艺条件,得到粗提液,并进一步考察大孔树脂类型、粗提液上样量、乙醇洗脱液pH值、乙醇体积分数、洗脱液用量等条件对水溶性总黄酮提纯结果的影响。结果表明:水浴加热浸提的提取率最高,其最佳浸提条件为水浴温度95℃,加热时间10min。HP-20大孔树脂对明日叶叶中总黄酮具有较好吸附与解吸性能,最佳提纯工艺条件为质量浓度为2.445mg/mL的粗提液上样量为40mL,洗脱液乙醇体积分数70%、pH2、洗脱用量为8BV。提纯产物总黄酮含量比明日叶叶干粉的含量提高了约6.8倍。%In the present study,three aqueous extraction techniques,water bath extraction,direct heating extraction and microwave-assisted extraction were compared to determine the most suitable one for maximum extraction yield of water-soluble flavonoids from Angelica keiskei Koidzumi leaves.The water bath extraction method provided maximum extraction of water-soluble flavonoids and the optimal extraction conditions were heating at 95 ℃ for 10 min.Further investigations were carried to explore the purification of the resulting crude extract under various conditions of macroporous resin type,sample loading amount,and elution solvent(ethanol) pH,ethanol concentration and elution volume.HP-20 type resin was found to have higher adsorption and desorption capacities for flavonoids and the optimal conditions for purifying water-soluble flavonoids from Angelica keiskei Koidzumi leaves using the resin were determined as follows: 40 mL of crude extract sample at 2.445 mg/mL were loaded onto HP-20 type resin and then desorbed with 8 BV of 70% acidified ethanol(pH 2),resulting in a purification factor ofapproximately 6.8.

  12. Verification of the formulation and efficacy of Danggui Buxue Tang (a decoction of Radix Astragali and Radix Angelicae Sinensis: an exemplifying systematic approach to revealing the complexity of Chinese herbal medicine formulae

    Directory of Open Access Journals (Sweden)

    Li Winnie

    2007-11-01

    Full Text Available Abstract This article exemplifies a systematic approach to revealing the complexity of Chinese herbal medicine formulae through three levels of scientific research: standardization of herbs, verification of ancient formulae and mechanism studies. We use Danggui Buxue Tang (DBT as an example for this approach. Among thousands of traditional Chinese medicine herbal formulae, almost all of which consist of multiple herbs, DBT is one of the simplest. Containing only two herbs, namely Radix Astragali (RA and Radix Angelicae Sinensis (RAS, DBT is traditionally used to treat ailments in women. The weight ratio of RA to RAS in DBT was prescribed to be 5:1 as early as in 1247 AD. In addition to advanced chemical analysis of herbal constituents, DNA genotyping techniques have been developed for reliable standardization of RA and RAS. Chemical evaluation shows that main active constituents in DBT, including astragaloside IV, calycosin, formononetin and ferulic acid, were most abundant after extraction at the RA to RAS ratio of 5:1, whereas other tested RA to RAS ratios only gave sub-optimal levels of the active constituents. Biological evaluation indicates that bioactivities of DBT, e.g. immuno-modulatory, oesteotropic and estrogenic effects are also best exerted at the RA to RAS ratio of 5:1. Correlation analysis demonstrates statistically significant relationship between the tested chemical constituents and tested bioactivities. Up- and down-regulation of expression of some genes as potential biomarkers has been detected by using gene chip technology. This systematic approach on the basis of herbal standardization, chemical and biological verification and mechanism studies, as exemplified in this article, will be useful to reveal the complexity of not only DBT but also other Chinese medicine herbal formulae.

  13. Combined climate- and prey-mediated range expansion of Humboldt squid (Dosidicus gigas), a large marine predator in the California Current System.

    Science.gov (United States)

    Stewart, Julia S; Hazen, Elliott L; Bograd, Steven J; Byrnes, Jarrett E K; Foley, David G; Gilly, William F; Robison, Bruce H; Field, John C

    2014-06-01

    Climate-driven range shifts are ongoing in pelagic marine environments, and ecosystems must respond to combined effects of altered species distributions and environmental drivers. Hypoxic oxygen minimum zones (OMZs) in midwater environments are shoaling globally; this can affect distributions of species both geographically and vertically along with predator-prey dynamics. Humboldt (jumbo) squid (Dosidicus gigas) are highly migratory predators adapted to hypoxic conditions that may be deleterious to their competitors and predators. Consequently, OMZ shoaling may preferentially facilitate foraging opportunities for Humboldt squid. With two separate modeling approaches using unique, long-term data based on in situ observations of predator, prey, and environmental variables, our analyses suggest that Humboldt squid are indirectly affected by OMZ shoaling through effects on a primary food source, myctophid fishes. Our results suggest that this indirect linkage between hypoxia and foraging is an important driver of the ongoing range expansion of Humboldt squid in the northeastern Pacific Ocean. PMID:24443361

  14. Influence of Crassostrea gigas on the permeability and microstructure of the surface layer of concrete exposed to the tidal zone of the Yellow Sea.

    Science.gov (United States)

    Lv, JianFu; Mao, JiZe; Ba, HengJing

    2015-01-01

    Concrete exposed to the tidal zone of the Yellow Sea and bearing Crassostrea gigas (CG) with differing areal coverages was investigated for evidence of biologically induced corrosion prevention. The experimental results indicated that both the chloride ion profile and the neutralization depth of the concrete decreased with increasing CG coverage. Moreover, the water absorption rate and the chloride ion permeability of concrete with the original surface intact also declined with increasing degrees of CG coverage. However, the water absorption rates of three concrete samples with 2 mm of the surface layer removed were similar, as was their chloride ion permeability. Mercury intrusion porosimetry tests indicated that CG significantly reduced the pore structure of the concrete surface layer. SEM observation revealed that the CG cementation membrane and left valve were tightly glued to the concrete surface and had a dense structure. Concrete durability indices showed that high CG coverage greatly improved concrete durability. PMID:25584410

  15. CgIL17-5, an ancient inflammatory cytokine in Crassostrea gigas exhibiting the heterogeneity functions compared with vertebrate interleukin17 molecules.

    Science.gov (United States)

    Xin, Lusheng; Zhang, Huan; Zhang, Ran; Li, Hui; Wang, Weilin; Wang, Lingling; Wang, Hao; Qiu, Limei; Song, Linsheng

    2015-12-01

    Interleukin 17 (IL17) is a proinflammatory cytokine that plays an important role in immune response. Recently, five novel IL17 homologs have been identified by screening and analyzing the genome of pacific oyster Crassostrea gigas. In the present study, the functions of CgIL17-5 were investigated by examining the distribution of its mRNA and protein, ligands binding and modulation in immune response. The mRNA expression levels of CgIL17-5 in hemocytes of oysters post twice challenges of Vibrio splendidus were all significantly up-regulated (P Micrococcus luteus and Escherichia coli. All the results collectively suggested that CgIL17-5, as an ancient inflammatory cytokine, could not only activate signal transduction for the release of other cytokines, but also mediate the clearance of extracellular bacteria in oysters. PMID:26257382

  16. High-sensitivity nuclear magnetic resonance at Giga-Pascal pressures: a new tool for probing electronic and chemical properties of condensed matter under extreme conditions.

    Science.gov (United States)

    Meier, Thomas; Haase, Jürgen

    2014-01-01

    Nuclear Magnetic Resonance (NMR) is one of the most important techniques for the study of condensed matter systems, their chemical structure, and their electronic properties. The application of high pressure enables one to synthesize new materials, but the response of known materials to high pressure is a very useful tool for studying their electronic structure and developing theories. For example, high-pressure synthesis might be at the origin of life; and understanding the behavior of small molecules under extreme pressure will tell us more about fundamental processes in our universe. It is no wonder that there has always been great interest in having NMR available at high pressures. Unfortunately, the desired pressures are often well into the Giga-Pascal (GPa) range and require special anvil cell devices where only very small, secluded volumes are available. This has restricted the use of NMR almost entirely in the past, and only recently, a new approach to high-sensitivity GPa NMR, which has a resonating micro-coil inside the sample chamber, was put forward. This approach enables us to achieve high sensitivity with experiments that bring the power of NMR to Giga-Pascal pressure condensed matter research. First applications, the detection of a topological electronic transition in ordinary aluminum metal and the closing of the pseudo-gap in high-temperature superconductivity, show the power of such an approach. Meanwhile, the range of achievable pressures was increased tremendously with a new generation of anvil cells (up to 10.1 GPa), that fit standard-bore NMR magnets. This approach might become a new, important tool for the investigation of many condensed matter systems, in chemistry, geochemistry, and in physics, since we can now watch structural changes with the eyes of a very versatile probe. PMID:25350694

  17. Development of a Pacific oyster (Crassostrea gigas 31,918-feature microarray: identification of reference genes and tissue-enriched expression patterns

    Directory of Open Access Journals (Sweden)

    Huvet Arnaud

    2011-09-01

    Full Text Available Abstract Background Research using the Pacific oyster Crassostrea gigas as a model organism has experienced rapid growth in recent years due to the development of high-throughput molecular technologies. As many as 56,268 EST sequences have been sequenced to date, representing a genome-wide resource that can be used for transcriptomic investigations. Results In this paper, we developed a Pacific oyster microarray containing oligonucleotides representing 31,918 transcribed sequences selected from the publicly accessible GigasDatabase. This newly designed microarray was used to study the transcriptome of male and female gonads, mantle, gills, posterior adductor muscle, visceral ganglia, hemocytes, labial palps and digestive gland. Statistical analyses identified genes differentially expressed among tissues and clusters of tissue-enriched genes. These genes reflect major tissue-specific functions at the molecular level, such as tissue formation in the mantle, filtering in the gills and labial palps, and reproduction in the gonads. Hierarchical clustering predicted the involvement of unannotated genes in specific functional pathways such as the insulin/NPY pathway, an important pathway under study in our model species. Microarray data also accurately identified reference genes whose mRNA level appeared stable across all the analyzed tissues. Adp-ribosylation factor 1 (arf1 appeared to be the most robust reference for normalizing gene expression data across different tissues and is therefore proposed as a relevant reference gene for further gene expression analysis in the Pacific oyster. Conclusions This study provides a new transcriptomic tool for studies of oyster biology, which will help in the annotation of its genome and which identifies candidate reference genes for gene expression analysis.

  18. Novel, major 2α- and 2β-hydroxy bile alcohols and bile acids in the bile of Arapaima gigas, a large South American river fish.

    Science.gov (United States)

    Sato née Okihara, Rika; Saito, Tetsuya; Ogata, Hiroaki; Nakane, Naoya; Namegawa, Kazunari; Sekiguchi, Shoutaro; Omura, Kaoru; Kurabuchi, Satoshi; Mitamura, Kuniko; Ikegawa, Shigeo; Raines, Jan; Hagey, Lee R; Hofmann, Alan F; Iida, Takashi

    2016-03-01

    Bile alcohols and bile acids from gallbladder bile of the Arapaima gigas, a large South American freshwater fish, were isolated by reversed-phase high-performance liquid chromatography. The structures of the major isolated compounds were determined by electrospray-tandem mass spectrometry and nuclear magnetic resonance using (1)H- and (13)C-NMR spectra. The novel bile salts identified were six variants of 2-hydroxy bile acids and bile alcohols in the 5α- and 5β-series, with 29% of all compounds having hydroxylation at C-2. Three C27 bile alcohols were present (as ester sulfates): (24ξ,25ξ)-5α-cholestan-2α,3α,7α,12α,24,26-hexol; (25ξ)-5β-cholestan-2β,3α,7α,12α,26,27-hexol, and (25ξ)-5α-cholestan-2α,3α,7α,12α,26,27-hexol. A single C27 bile acid was identified: (25ξ)-2α,3α,7α,12α-tetrahydroxy-5α-cholestan-26-oic acid, present as its taurine conjugate. Two novel C24 bile acids were identified: the 2α-hydroxy derivative of allochenodeoxycholic acid and the 2β-hydroxy derivative of cholic acid, both occurring as taurine conjugates. These studies extend previous work in establishing the natural occurrence of novel 2α- and 2β-hydroxy-C24 and C27 bile acids as well as C27 bile alcohols in both the normal (5β) as well as the (5α) "allo" A/B-ring juncture. The bile salt profile of A. gigas appears to be unique among vertebrates. PMID:26768415

  19. cgMolluscidin, a novel dibasic residue repeat rich antimicrobial peptide, purified from the gill of the Pacific oyster, Crassostrea gigas.

    Science.gov (United States)

    Seo, Jung-Kil; Lee, Min Jeong; Nam, Bo-Hye; Park, Nam Gyu

    2013-08-01

    A 5.5 kDa antimicrobial peptide consisting of 55 amino acids, cgMolluscidin, was purified from the acidified gill extract of the Pacific oyster, Crassostrea gigas, by ion-exchange and C18 reversed-phase high performance liquid chromatography. By comparing the N-terminal amino acid sequences and the molecular weight of this peptide with those of other known antimicrobial peptides, it has been revealed that this peptide had no homology with any known peptides. cgMolluscidin showed potent antimicrobial activity against both Gram-positive bacteria, including Bacillus subtilis, Micrococcus luteus, and Staphylococcus aureus (minimal effective concentrations [MECs]; 1.3-31.3 μg/mL), and Gram-negative bacteria, including Escherichia coli, Salmonella enterica, and Vibrio parahaemolyticus ([MECs]; 0.4-2.3 μg/mL), without hemolytic activity. However, cgMolluscidin did not show any significant activity against Candida albicans. The deduced amino acid sequence of the cgMolluscidin showed no hit in public protein databases, while the nucleotide sequence had a 99% homology (E value = 0) with only the unknown ESTs sequenced by C. gigas EST project. Tissue distribution of the cgMolluscidin mRNA suggests that it is constitutively expressed as a mature form in a non-tissue-specific manner. The cgMolluscidin mRNA expression level was significantly up-regulated at 12 h (2.8-fold) post injection with Vibrio sp. This peptide is highly basic and contains several dibasic residue repeats including Lysine-Lysine or Lysine-Arginine in the sequence, but may not form an ordered structure. These results suggest that cgMolluscidin might be an oyster-specific novel antimicrobial peptide. PMID:23711469

  20. Origine et développement des cellules germinales chez l'huître Crassostrea gigas : intérêt pour le contrôle de la reproduction en écloserie

    OpenAIRE

    Fabioux, Caroline

    2004-01-01

    Le renouvellement annuel de la population de cellules germinales chez l'huître creuse Crassostrea gigas est une étape clé de son cycle de reproduction. La compréhension de ces mécanismes est essentielle à la maîtrise de la reproduction contrôlée de C. gigas, indispensable pour répondre à une demande croissante des ostréiculteurs, de naissain produit en écloserie. Les objectifs de cette étude étaient de déterminer l'origine et les mécanismes de renouvellement annuel des cellules germinales de ...

  1. Corrosion inhibiting organic coatings

    Energy Technology Data Exchange (ETDEWEB)

    Sasson, E.

    1984-10-16

    A corrosion inhibiting coating comprises a mixture of waxes, petroleum jelly, a hardener and a solvent. In particular, a corrosion inhibiting coating comprises candelilla wax, carnauba wax, microcrystalline waxes, white petrolatum, an oleoresin, lanolin and a solvent.

  2. Maternal inheritance of mitochondrial DNA (mtDNA) in the Pacific oyster (Crassostrea gigas): a preliminary study using mtDNA sequence analysis with evidence of random distribution of MitoTracker-stained sperm mitochondria in fertilized eggs.

    Science.gov (United States)

    Obata, Mayu; Shimizu, Michiyo; Sano, Natsumi; Komaru, Akira

    2008-03-01

    In many bivalve species, paternal and maternal mitochondrial DNA (mtDNA) from sperm and eggs is transmitted to the offspring. This phenomenon is known as doubly uniparental inheritance (DUI). In these species, sperm mtDNA (M type) is inherited by the male gonad of the offspring. Egg mtDNA (F type) is inherited by both male and female somatic cells and female gonadal cells. In Mytilidae, sperm mitochondria are distributed in the cytoplasm of differentiating male germ cells because they are transmitted to the male gonad. In the present study, we investigated maternal inheritance of mtDNA in the Pacific oyster, Crassostrea gigas. Sequence analysis of two mitochondrial non-coding regions revealed an identical sequence pattern in the gametes and adductor muscle samples taken from six males and five females. To observe whether sperm mitochondria were specifically located in the cytoplasm of differentiating germ cells, their distribution was recorded in C. gigas fertilized eggs by vital staining with MitoTracker Green. Although the 1D blastomere was identified in the cytoplasm of differentiating germ cells, sperm mitochondria were located at the 1D blastomere in only 32% of eggs during the 8-cell stage. Thus, in C. gigas, sperm mitochondria do not specifically locate in the germ cell region at the 1D blastomere. We suggest that the distribution of sperm mitochondria is not associated with germ cell formation in C. gigas. Furthermore, as evidenced by the mtDNA sequences of two non-coding regions, we conclude that mitochondrial DNA is maternally inherited in this species. PMID:18393561

  3. Utilisation des protozoaires ciliés (Paramecium africanum, Colpidium uncinatum, Neobursaridium gigas pour l'épuration bactériologique des eaux polluées en microcosme

    Directory of Open Access Journals (Sweden)

    Nguedji, JBT.

    2003-01-01

    Full Text Available An Microcosm Use of Ciliate Protozoa (Paramecium africanum, Colpidium uncinatum, Neobursaridium gigas for Bacterial Purification of Polluted Water. Tests on the grazing of ciliated protozoa Paramecium africanum, Colpidium uncinatum and Neobursaridium gigas on the bacteria Escherichia coli and Staphylococcus sp. were carried out in an microcosm aquatic environment. These tests aimed at assessment of the role of these predators protozoa in the bacterial purification of polluted water. The evolution of the feeding kinetics of these protozoa shows a phase of adaptation of the predator to the prey, with a slow feeding rate and a phase of accelerate of feeding. The two phases are separated by a short period of recognition. The polynomial functions of the kinetics of predation show that C. uncinatum and P. africanum graze faster on E. coli than on Staphylococcus sp., meanwhile N. gigas feeds slowly on E. coli than on Staphylococcus sp. The time of contact between the ciliated protozoa and the bacteria, the predatory protozoa specie and the specie of the bacteria, should be considered simultaneously when evaluating the variation of bacterial concentrations in aquatic environment being purified.

  4. Content Determination of 5 Heavy Metals in Coptidis Rhizoma and Angelica dahurica%黄连、川白芷中5种重金属的含量测定

    Institute of Scientific and Technical Information of China (English)

    吴四维; 李铁钢; 王爱平; 何东芮; 罗维早

    2012-01-01

    OBJECTIVE: To establish the maximum limits of 5 heavy metals in Coptidis Rhizoma and processed product and Angelica dahurica. METHODS: Samples were digested with microwave digestion system, and the contents of As and Hg were ana-lyzed by atomic fluorescence spectrometric, and the contents of Pb, Cd and Cu were analyzed by atomic absorption spectrophotom-etry. RESULTS: Except As, all the other heavy metals in Coptidis Rhizoma exceed the criteria; As for A. Dahurica, all the heavy metals are within the standard except Cu. CONCLUSION: The maximum limits of Pb, Hg, As, Cu , Cd in samples were 5.0 μg-g-1,0.2 μg·g-1,2.0 μg·g-1,20.0 μg·g-1, 0.3 μg·g-1, respectively.%目的:建立黄连及其炮制品、川白芷中5种重金属的最大限量标准.方法:采用微波消解法消解样品后,用原子荧光分光光度法测定药材中汞(Hg)、砷(As)的含量,用原子吸收分光光度法测定药材中铅(Pb)、镉(Cd)、铜(Cu)的含量.结果:黄连中除As以外,其余重金属含量均超标;川白芷中除Cu超标外,其余重金属含量均未超标.结论:建议将黄连、川白芷中重金属含量限度规定为:Pb≤5.0 μg·g-1、Hg≤0.2 μg·g-1、As≤2.0 μg·g-1、Cu≤20.0 μg·g-1、Cd≤0.3 μg·g-1.

  5. 基于Illumina HiSeq 2000测序技术对当归根的转录组特性研究%Study on transcriptome characteristic of Angelica Sinensis Radix by Illumina HiSeq 2000 sequencing

    Institute of Scientific and Technical Information of China (English)

    杨杰; 王金权; 丁维俊; 李炜弘; 刘宏伟

    2015-01-01

    目的 识别当归Angelica sinensis根药用活性物质的基因序列,阐释当归次生代谢产物生物合成的遗传基础.方法 从当归头、当归尾提取总RNA,质量鉴定合格后构建测序文库.测序文库检测合格后在Illumina HiSeq 2000测序仪上完成双端测序.采用相关生物信息学方法分析当归根的转录组特性.结果 采用Illumina HiSeq 2000高通量测序获得当归根转录组的66 431 540个原始短读序.用生物信息学方法从头组装并注释了30 432个功能基因序列(unigene).应用Uniprot蛋白数据库进行序列相似性比对,当归功能基因序列主要分布于目前研究较深入的7种重要经济作物,如葡萄、蓖麻、毛果杨、大豆、苜蓿、拟南芥和烟草.研究发现,当归根表达的127、69、70、94个unigene分别映射到类苯基丙烷生物合成、N-聚糖生物合成、黄酮类化合物生物合成和叶酸生物合成等路径,可能参与药用活性物质阿魏酸、当归多糖、当归总黄酮和叶酸的生物合成.结论 参与当归根重要药效物质(阿魏酸、当归多糖、当归总黄酮等)生物合成的功能基因序列可能是当归补血、活血功效的分子生物学基础.

  6. 当归对大鼠心肌梗死后心肌纤维化的影响及机制%Effect of angelica on myocardial fibrosis post myocardial infarction in rats

    Institute of Scientific and Technical Information of China (English)

    赵艳峰; 徐江; 汤剑青; 王虹; 上官海娟; 官洪山

    2006-01-01

    目的:观察转化生长因子-β1(TGF-β1)、巨噬细胞在心肌梗死后心肌纤维化发生发展过程中的变化及当归的治疗作用,探讨心肌梗死后心肌纤维化的发生及当归的干预机制.方法:结扎SD大鼠冠脉前降支复制心肌梗死模型,随机分为假手术(sham)组、心肌梗死(MI)组和心肌梗死当归(MI+angelica)组.术后24 h开始给药,MI+angelica组腹腔注射当归(20 mL·kg-1·d-1,相当于生药10 g·kg-1·d-1),sham组和MI组腹腔注射等量生理盐水.于术后1、2、4周记录左室血流动力学改变,检测非梗死区心肌胶原含量、TGF-β1及巨噬细胞的变化.结果:①MI组和MI+angelica组非梗死区心肌TGF-β1及巨噬细胞阳性表达显著高于sham组(P<0.01),以1周的阳性表达为最高,但MI+angelica组低于MI组(P<0.01);②术后各时点MI组心功能受损,于术后2周和4周心肌胶原含量明显高于sham组(P<0.01);术后4周MI+angelica组心功能损害轻于MI组,心肌胶原含量低于MI组(P<0.01).结论:当归通过抑制巨噬细胞在非梗死区的浸润、下调TGF-β1的表达,阻断促纤维化发生的环节,减轻心肌梗死后非梗死区反应性胶原的过度沉积,防治心肌梗死后心肌纤维化,改善心脏功能.

  7. Clinical research on constipation prevention for elderly lower limb fracture using angelica with honey and sesame oil%当归蜜香饮用于预防老年下肢骨折病人便秘的临床护理研究

    Institute of Scientific and Technical Information of China (English)

    高素芝

    2009-01-01

    目的 探讨老年下肢骨折病人预防便秘的有效方法.方法 将人选的100例老年下肢骨折的住院病人随机分为观察组和对照组,每组各50例.观察组采用口服当归蜜香饮预防便秘,对照组则采用传统方法预防便秘(如增加膳食纤维、多饮水、腹部按摩、多活动等).分别观察两组患者术后治疗效果,同时观察两组患者排便时的心率、血压及排便时间.结果 观察组有效率为90%,对照组有效率为68%,两组比较差异具有显著性(P<0.01).观察组心率升高显著低于对照组(P<0.01或0.05).结论 服用当归蜜香饮对预防老年下肢骨折病人引起的便秘有显著效果.%Objective The research on effective therapies about elderly lower limb fracture.Methods Divided 100 elderly lower limb fracture patients into observation group and comparison group in random,50 subjects each.Observation group adopts angelica with honey and sesame oil,while comparison group adopts traditional therapies to prevent diarrhea (such as eating more fiber,drinking more water,abdomen massage,more exercise) .Results By observing the number of people with obvious effects,some effects and no effects,meanwhile their heart rates,blood pressure,defecation time and effort,abdominal distention,exhaustion when defecating,we conclude that the observation group,after drinking angelica with honey and sesame oil,has more patients with obvious and some effects in evidence.They feel their abdomen comfortable and mind at ease.There is no discomforts and the result is statistically valid (P < 0.01) .Conclusion Angelica with honey and sesame oil has obvious effects to prevent constipation for elderly lower limb fracture.

  8. Morfologia e crescimento do músculo estriado esquelético no pirarucu Arapaima gigas Cuvier, 1817 (Teleostei, Arapaimidae - DOI: 10.4025/actascibiolsci.v30i2.3640 Morphology and skeletal muscle growth in pirarucu Arapaima gigas Cuvier, 1817 (Teleostei, Arapaimidae - DOI: 10.4025/actascibiolsci.v30i3.3640

    Directory of Open Access Journals (Sweden)

    Maeli Dal Pai Silva

    2008-05-01

    Full Text Available O objetivo deste trabalho foi avaliar as características morfológicas e de crescimento do músculo estriado esquelético no pirarucu (Arapaima gigas. Foram utilizados animais em duas fases de crescimento: alevinos, com 50 dias de idade, e juvenis, com um ano de idade. Após eutanásia dos animais, fragmentos musculares das regiões dorsal, lateral cranial e lateral caudal foram coletados e congelados em nitrogênio líquido. Cortes histológicos (10 µm foram submetidos às colorações HE e Tricrômico de Gomori, para a análise morfológica, e NADH-TR, para a análise do metabolismo oxidativo das fibras musculares. Foi calculado o menor diâmetro das fibras musculares brancas nas regiões dorsal e lateral cranial. A musculatura dorsal branca mostrou-se mais desenvolvida e, na musculatura lateral, observaram-se compartimentos distintos: superficial vermelho e profundo branco. Nos alevinos, o crescimento muscular ocorreu predominantemente por hiperplasia das fibras e, nos juvenis, predominou o crescimento muscular por hipertrofia.The aim of this work was to evaluate the morphological and growth characteristics of skeletal muscle tissue in pirarucu (Arapaima gigas using alevins (50 days old and juveniles (1 year old. Muscle samples were collected from dorsal, lateral cranial, and lateral caudal regions, and then frozen in liquid nitrogen. Histological frozen sections (10 µm were stained with HE and Gomori Trichrome for morphological analysis, and NADH-TR to evaluate muscle fiber oxidative metabolism. Morphometric analysis samples were obtained from dorsal and lateral cranial regions, and smallest diameter white fibers were measured. White dorsal muscle was thicker and two muscle fiber compartments were identified in the lateral cranial region: red (superficial and white (deep muscle. Hyperplasia muscle growth predominated in alevins and hypertrophy in juveniles.

  9. Inhibition in multiclass classification

    OpenAIRE

    Huerta, Ramón; Vembu, Shankar; Amigó, José M.; Nowotny, Thomas; Elkan, Charles

    2012-01-01

    The role of inhibition is investigated in a multiclass support vector machine formalism inspired by the brain structure of insects. The so-called mushroom bodies have a set of output neurons, or classification functions, that compete with each other to encode a particular input. Strongly active output neurons depress or inhibit the remaining outputs without knowing which is correct or incorrect. Accordingly, we propose to use a classification function that embodies unselective inhibition and ...

  10. Population dynamics of the invasive Pacific oyster Crassostrea gigas during the early stages of an outbreak in the Wadden Sea (Germany)

    Science.gov (United States)

    Schmidt, Andreas; Wehrmann, Achim; Dittmann, Sabine

    2008-12-01

    Since the late 1990s, the Pacific oyster ( Crassostrea gigas) has spread into the East Frisian Wadden Sea (Germany). This invasion provided an opportunity to study the population dynamics and the patterns of spread during the initial bioinvasion process. With its source area in The Netherlands, the bioinvasion continues in an eastward direction, as documented by a gradient of high abundances in the west and low abundances in the east during the first study year. One year later, abundances of the Pacific oyster were more heterogenic and differed between adjacent tidal basins. The increase in population sizes at all study sites was very high, reaching levels similar to native occurrence populations. The growth constant ( K) varied between 0.300 and 0.990 year-1. The mussel bed with the highest densities had a mean abundance of >300 ind. m-2, and a maximum of 1,460 ind. m-2. Furthermore, the bioinvasion was facilitated by a low mortality ( Z) found for populations between 0.5 and 1.5 years old ( Z = 0.03-0.13 year-1). At present, Pacific oysters are well established at several locations in the East Frisian Wadden Sea and may become with these reproductive potential self-sustaining populations.

  11. Proliferating cell nuclear antigen in gonad and associated storage tissue of the Pacific oyster Crassostrea gigas: seasonal immunodetection and expression in laser microdissected tissues.

    Science.gov (United States)

    Franco, Alban; Jouaux, Aude; Mathieu, Michel; Sourdaine, Pascal; Lelong, Christophe; Kellner, Kristell; Heude Berthelin, Clothilde

    2010-04-01

    To understand the processes involved in tissue remodeling associated with the seasonal reproductive cycle of the oyster Crassostrea gigas, we used immunodetection and expression measurements of proliferating cell nuclear antigen (PCNA). The expression of the PCNA gene was measured by real-time polymerase chain reaction in the whole gonadal area compared with laser microdissected gonad and storage tissue. Results underlined the advantage of the laser microdissection approach to detect expression, mainly for early stages of spermatogenesis. In the storage tissue, PCNA expression was reduced in the gonadal tubules, but immunolabeled hemocytes and vesicular cells were detected when the storage tissue was being restored. In the gonadal tubules, the PCNA gene was more highly expressed in males than in females. As soon as spermatogenesis was initiated, PCNA expression showed a high and constant level. In females, the expression level increased gradually until the ripe stage. The immunological approach established the involvement of peritubular cells in gonadal tubule expansion during early gametogenesis. In both sexes, gonial mitosis was immunodetected throughout the reproductive cycle. In males, the occurrence of two types of spermatogonia was ascertained by differential immunolabeling, and intragonadal somatic cell proliferation was noted. As expected, immunolabeling was never observed from stage II spermatocytes to spermatozoa. In females, positively stained cells were detected from oogonia to growing oocytes with various labeled intracellular locations. PMID:20151153

  12. Alkali- or acid-induced changes in structure, moisture absorption ability and deacetylating reaction of β-chitin extracted from jumbo squid (Dosidicus gigas) pens.

    Science.gov (United States)

    Jung, Jooyeoun; Zhao, Yanyun

    2014-01-01

    Alkali- or acid-induced structural modifications in β-chitin from squid (Dosidicus gigas, d'Orbigny, 1835) pens and their moisture absorption ability (MAA) and deacetylating reaction were investigated and compared with α-chitin from shrimp shells. β-Chitin was converted into the α-form after 3h in 40% NaOH or 1-3 h in 40% HCl solution, and α-chitin obtained from NaOH treatment had higher MAA than had native α-chitin, due to polymorphic destructions. In contrast, induced α-chitin from acid treatment of β-chitin had few polymorphic modifications, showing no significant change (P>0.05) in MAA. β-Chitin was more susceptible to alkali deacetylation than was α-chitin, and required a lower concentration of NaOH and shorter reaction time. These results demonstrate that alkali- or acid-treated β-chitin retained high susceptibility toward solvents, which in turn resulted in good biological activity of β-chitosan for use as a natural antioxidant and antimicrobial substance or application as edible coatings and films for various food applications. PMID:24444948

  13. Functional properties of protein from frozen mantle and fin of jumbo squid Dosidicus gigas in function of pH and ionic strength.

    Science.gov (United States)

    Rocha-Estrada, J G; Córdova-Murueta, J H; García-Carreño, F L

    2010-10-01

    Functional properties of protein from mantle and fin of the jumbo squid Dosidicus gigas were explained based on microscopic muscle fiber and protein fractions profiles as observed in SDS-PAGE. Fin has higher content of connective tissue and complex fiber arrangement, and we observed higher hardness of fin gels as expected. Myosin heavy chain (MHC) was found in sarcoplasmic, myofibril and soluble-in-alkali fractions of mantle and only in sarcoplasmic and soluble-in-alkali fractions of fin. An additive effect of salt concentration and pH affected the solubility and foaming properties. Fin and mantle proteins yielded similar results in solubility tests, but significant differences occurred for specific pH and concentrations of salt. Foaming capacity was proportional to solubility; foam stability was also affected by pH and salt concentration. Hardness and fracture strength of fin gels were significantly higher than mantle gels; gels from proteins of both tissues reached the highest level in the folding test. Structural and molecular properties, such as MHC and paramyosin solubility, arrangement of muscle fibers and the content of connective tissue were useful to explain the differences observed in these protein properties. High-strength gels can be formed from squid mantle or fin muscle. Fin displayed similar or better properties than mantle in all tests. PMID:21339164

  14. Chromosomal organization of simple sequence repeats in the Pacific oyster (Crassostrea gigas): (GGAT)4, (GT)7 and (TA)10 chromosome patterns

    Indian Academy of Sciences (India)

    K. Bouilly; R. Chaves; A. Leitão; A. Benabdelmouna; H. Guedes-Pinto

    2008-08-01

    Chromosome identification is essential in oyster genomic research. Fluorescence in situ hybridization (FISH) offers new opportunities for the identification of oyster chromosomes. It has been used to locate satellite DNAs, telomeres or ribosomal DNA sequences. However, regarding chromosome identification, no study has been conducted with simple sequence repeats (SSRs). FISH was used to probe the physical organization of three particular SSRs, (GGAT)4, (GT)7 and (TA)10 onto metaphase chromosomes of the Pacific oyster, Crassostrea gigas. Hybridization signals were observed in all the SSR probes, but the distribution and intensity of signals varied according to the oligonucleotide repeat. The intercalary, centromeric and telomeric bands were observed along the chromosomes, and for each particular repeat every chromosome pair presented a similar pattern, allowing karyotypic analysis with all the SSRs tested. Our study is the first in mollusks to show the application of SSR in situ hybridization for chromosome identification and karyotyping. This technique can be a useful tool for oyster comparative studies and to understand genome organization in different oyster taxa.

  15. A Feedback Mechanism to Control Apoptosis Occurs in the Digestive Gland of the Oyster Crassostrea gigas Exposed to the Paralytic Shellfish Toxins Producer Alexandrium catenella

    Directory of Open Access Journals (Sweden)

    Jean-Luc Rolland

    2014-09-01

    Full Text Available To better understand the effect of Paralytic Shellfish Toxins (PSTs accumulation in the digestive gland of the Pacific oyster, Crassostrea gigas, we experimentally exposed individual oysters for 48 h to a PSTs producer, the dinoflagellate Alexandrium catenella. In comparison to the effect of the non-toxic Alexandrium tamarense, on the eight apoptotic related genes tested, Bax and BI.1 were significantly upregulated in oysters exposed 48 h to A. catenella. Among the five detoxification related genes tested, the expression of cytochrome P450 (CYP1A was shown to be correlated with toxin concentration in the digestive gland of oysters exposed to the toxic dinoflagellate. Beside this, we observed a significant increase in ROS production, a decrease in caspase-3/7 activity and normal percentage of apoptotic cells in this tissue. Taken together, these results suggest a feedback mechanism, which may occur in the digestive gland where BI.1 could play a key role in preventing the induction of apoptosis by PSTs. Moreover, the expression of CYP1A, Bax and BI.1 were found to be significantly correlated to the occurrence of natural toxic events, suggesting that the expression of these genes together could be used as biomarker to assess the biological responses of oysters to stress caused by PSTs.

  16. Net ion fluxes in the facultative air-breather Hoplosternum littorale (tamoata) and the obligate air-breather Arapaima gigas (pirarucu) exposed to different Amazonian waters.

    Science.gov (United States)

    Baldisserotto, Bernardo; Copatti, Carlos E; Gomes, Levy C; Chagas, Edsandra C; Brinn, Richard P; Roubach, Rodrigo

    2008-12-01

    Fishes that live in the Amazon environment may be exposed to several kinds of water: black water (BW), acidic black water (pH 3.5) (ABW) and white water (WW), among others. The aim of the present study was to analyze net ion fluxes in the facultative air-breather Hoplosternum littorale (tamoata) and the obligate air-breather Arapaima gigas (pirarucu) exposed to different types of water. Fishes were acclimated in well water and later placed in individual chambers containing one type of water for ion flux measurements. After 4 h, the water in the chambers was replaced by a different type of water. The transfer of both species to ABW (independent of previous water exposure) increased net ion loss. Tamoatas transferred from ABW to BW or WW presented a net ion influx, but pirarucus showed only small changes on net ion efflux. These results allow us to conclude that tamoatas and pirarucus present differences in terms of ion regulation but that the general aspects of the ion flux are similar: (1) exposure to ABW led to net ion loss; (2) transfer from BW to WW or vice-versa induced only minor changes on net ion fluxes. These observations demonstrate that any osmoregulatory difficulties encountered by either species during changes between these latter two waters can be easily overcome. PMID:18958598

  17. 当归红芪超滤膜提取物对急性心肌缺血大鼠AST、LDH和LDH1的影响%Effect of Ultra -filtration Extract Mixture from Angelica Sinensis and Radix Hedysari on AST, LDH and LDH1-Acute Myocardial Ischemia Rats

    Institute of Scientific and Technical Information of China (English)

    陈雪娟; 倪志宏; 李应东

    2012-01-01

    Objective: To study the effect of ultra - filtration extract mixture from Angelica Sinensis and Radix Hedysari on activity of arainotransferase( AST), lactate dehydrogenase(LDH) and lactate dehydrogenase isoenzyme(LDHl) in serum of acute myocardial ischemia rats. Methods: Eighty healthy male wistar rats were randomly divided into five groups as Sham group, myocardial ischemia group, myocardial ischemia treated with low - dose, middle - dose and high - dose group; Rat myocardial ischemia model was established by ligation of the left anterior descending of coronary artery; the Angelica Sinensis and Radix Hedysari extract were obtained by ultrafiltration membrane technology; the activity of AST, LDH and LDH1 in serum was detected by using spectrophotometry after treatment for 24h and 72h independently. Results: Compared with the sham group, the myocardial ischemia group showed that the activity of AST, LDH and LDH1 in serum was significantly increased(P<0.05) ; the activity of AST, LDH and LDH1 in serum for each myocardial ischemia group treated with different doses of ultra - filtration extract mixture from Angelica Sinensis and Radix Hedysari was significantly decreased(P<0. 05) compared with the myocardial ischemia group. Conclusion;The result shows that ultra -filtration extract mixture from Angelica Sinensis and Radix Hedysari can reduce the activity of AST, LDH and LDH1 in serum and have significantly protective effect on myocardial ischemia while showing a dose - effect and time - effect relationship.%目的:探讨当归红芪超滤物对急性心肌梗死大鼠天冬氨酸氨基转移酶(aspartate aminotransferase,AST),乳酸脱氢酶(actate dehydrogenase,LDH)和乳酸脱氢酶同工酶(lactate dehydrogenase,LDH1)活性的影响,阐明当归红芪超滤物对缺血心肌的保护作用.方法:结扎左前降支建立大鼠心梗模型.将80只雄性Wistar大鼠随机分成5组,每组16只,分别为造模组(myocardial infarction

  18. Effect of Angelica polysaccharides on resistant ability of cryopreservation dormage of UCB hematopoietic cells%当归多糖对脐血造血细胞的抗冷冻损伤作用

    Institute of Scientific and Technical Information of China (English)

    关雪晶; 杨慧; 张雁; 吴宏

    2009-01-01

    目的:探讨当归多糖(APS)对脐血造血细胞的抗冷冻损伤作用.方法:采用细胞计数法比较羟乙基淀粉(HES)、明胶、淋巴细胞分离液(Ficoll)分离脐血单个核细胞(MNC)的回收率.应用细胞计数法、台盼蓝拒染法、集落形成实验和流式细胞术,检测冻存1,3,6 mo脐血MNC的生物学活性,将脐血MNC与不同浓度APS共培养24 h后冻存,I mo后复苏,观察APS对脐血MNC抗冷冻损伤的作用.结果:HES法、明胶法的MNC回收率均大于85%,显著高于Ficoll法(50.00±4.00)%(P<0.05);冻存1,3,6 mo组MNC,CFU-Mix,CD34~+细胞回收率及台盼蓝拒染率差异均无显著性,且脐血MNC的损伤与冻存时间不相关.APS 50,100,200,400 ms/L不同浓度APS组MNC,CFU-Mix回收率和台盼蓝拒染率除APS 400 ms/L组下降外,其余各组明显上升(P<0.05);各组组间CD34~+细胞回收率差异无显著性.结论:APS可有效提高脐血造血细胞的抗冷冻损伤能力.%AIM: To explore the effect on umbilical cord blood ( UCB ) hematopoietic cells of Angelica polysaccharides ( ALES ) to resist cryopreservation damage. METHODS: Cytometry was used to compare the recovery rate of UCB mononuclear cells ( MNC ) when they were separated respectively by density gradient centrifugation of Ficol1, precipitation method of gelatinum and hydroxyethy1 starch (HES) ; Cytometry, method of typan blue exclusion, colony-forming assay and flow cytometry were used to detect the bioactivity of UCB MNC after frozen 1,3,6 months; MNC were cultured with various density APS for 24 h, then frozen, one month later thawed and detected the effect of resistant cryoprescrvation damage of APS on UCB MNC with the same method. RESULTS : Both the recovery rate of method of gelatinum and HES were larger than 85%, and all higher than the one of Fieoll ( 50. 00 ±4.00 ) % ( P < 0.05 ) ; After 1,3,6 months cryoprescrvation, there were no significant difference on the recovery rate of UCB MNC, CFU-Mix,CD34~+ cells and rate of

  19. Research and Analysis on National Scientific and Technological Achievements of Radix Angelicas, Radix Astragall and Radix Codonopsis%当归、黄芪和党参国家科技成果的研究分析

    Institute of Scientific and Technical Information of China (English)

    张尚智; 孙逸来; 赵芳; 陈鑫; 武睿

    2013-01-01

    目的:了解国内当归、黄芪和党参3种中药国家科技成果研究的基本现状,揭示其文献和研究内容等方面的特征,为今后相关研究提供借鉴。方法采用内容分析法,借助计算机的分类、统计功能,按成果的基本情况、成果的研究内容、成果的评价与应用等项目进行分类、统计分析。结果3种中药国家科技成果,甘肃、河北、山东等地排在前列,成果主要由高校、医院、科研院所等部门承担,成果课题的来源主要为地方计划和自选课题,成果研究内容主要分布在药物疗效、药物制剂、栽培、贮藏加工等领域。结论国家科技成果数据库(知网版)中,3种中药国家科技成果增幅缓慢,成果以应用技术研究为主,成果转化率低,数据库中一些成果项目的数据缺失较严重。%Objective By learning about the current basic situation of research on national scientific and technological achievements of three species of Chinese herbal, Radix Angelicas, Radix Astragall and Radix Codonopsis, to reveal the features in literature and research content, and provide reference for related research in future. Methods By using content analysis approach, the basic situation of achievements, the research content of achievements, and assessment and application of achievements were classified and statistically analyzed by classifying and statistical function of computer. Results The provinces that rank the top of national scientific and technological achievements of the three species of Chinese herbal were Gansu, Hebei and Shandong. The achievements were mainly undertaken by college or university, hospital and scientific research institutions. The source of project achievements mainly originated from local project and optional project. The research content of the achievements largely focused on the fields like drug therapeutic effect, pharmaceutical preparation, cultivation techniques, storing and processing

  20. Inhibition of selectin binding

    Energy Technology Data Exchange (ETDEWEB)

    Nagy, Jon O. (Rodeo, CA); Spevak, Wayne R. (Albany, CA); Dasgupta, Falguni (New Delhi, IN); Bertozzi, Caroline (Albany, CA)

    2001-10-09

    This invention provides compositions for inhibiting the binding between two cells, one expressing P- or L-selectin on the surface and the other expressing the corresponding ligand. A covalently crosslinked lipid composition is prepared having saccharides and acidic group on separate lipids. The composition is then interposed between the cells so as to inhibit binding. Inhibition can be achieved at an effective oligosaccharide concentration as low as 10.sup.6 fold below that of the free saccharide. Since selectins are involved in recruiting cells to sites of injury, these composition scan be used to palliate certain inflammatory and immunological conditions.