Phylogeography of the Sponge Suberites diversicolor in Indonesia: Insights into the Evolution of Marine Lake Populations

NARCIS (Netherlands)

Becking, L.E.; Erpenbeck, D.; Peijnenburg, K.T.C.A.; Voogd, de N.J.

2013-01-01

The existence of multiple independently derived populations in landlocked marine lakes provides an opportunity for fundamental research into the role of isolation in population divergence and speciation in marine taxa. Marine lakes are landlocked water bodies that maintain a marine character through

Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka populations

Directory of Open Access Journals (Sweden)

Habicht Christopher

2011-02-01

Full Text Available Abstract Background Disentangling the roles of geography and ecology driving population divergence and distinguishing adaptive from neutral evolution at the molecular level have been common goals among evolutionary and conservation biologists. Using single nucleotide polymorphism (SNP multilocus genotypes for 31 sockeye salmon (Oncorhynchus nerka populations from the Kvichak River, Alaska, we assessed the relative roles of geography (discrete boundaries or continuous distance and ecology (spawning habitat and timing driving genetic divergence in this species at varying spatial scales within the drainage. We also evaluated two outlier detection methods to characterize candidate SNPs responding to environmental selection, emphasizing which mechanism(s may maintain the genetic variation of outlier loci. Results For the entire drainage, Mantel tests suggested a greater role of geographic distance on population divergence than differences in spawn timing when each variable was correlated with pairwise genetic distances. Clustering and hierarchical analyses of molecular variance indicated that the largest genetic differentiation occurred between populations from distinct lakes or subdrainages. Within one population-rich lake, however, Mantel tests suggested a greater role of spawn timing than geographic distance on population divergence when each variable was correlated with pairwise genetic distances. Variable spawn timing among populations was linked to specific spawning habitats as revealed by principal coordinate analyses. We additionally identified two outlier SNPs located in the major histocompatibility complex (MHC class II that appeared robust to violations of demographic assumptions from an initial pool of eight candidates for selection. Conclusions First, our results suggest that geography and ecology have influenced genetic divergence between Alaskan sockeye salmon populations in a hierarchical manner depending on the spatial scale. Second

Regional, temporal, and species patterns of mercury in Alaskan seabird eggs: Mercury sources and cycling or food web effects?

International Nuclear Information System (INIS)

Day, Rusty D.; Roseneau, David G.; Vander Pol, Stacy S.; Hobson, Keith A.; Donard, Olivier F.X.; Pugh, Rebecca S.; Moors, Amanda J.; Becker, Paul R.

2012-01-01

Mercury concentration ([Hg]), δ 15 N, and δ 13 C values were measured in eggs from common murres (Uria aalge), thick-billed murres (U. lomvia), glaucous gulls (Larus hyperboreus), and glaucous-winged gulls (L. glaucescens) collected in Alaska from 1999 to 2005. [Hg] was normalized to a common trophic level using egg δ 15 N values and published Hg trophic magnification factors. Egg [Hg] was higher in murres from Gulf of Alaska, Cook Inlet, and Norton Sound regions compared to Bering Sea and Bering Strait regions, independent of trophic level. We believe the Yukon River outflow and terrestrial Hg sources on the southern Seward Peninsula are responsible for the elevated [Hg] in Norton Sound eggs. Normalizing for trophic level generally diminished or eliminated differences in [Hg] among taxa, but temporal variability was unrelated to trophic level. Normalizing murre egg [Hg] by trophic level improves the confidence in regional comparisons of Hg sources and biogeochemical cycling in Alaska. - Highlights: ► Seabird eggs used for monitoring Hg in Alaskan marine environment. ► Egg Hg concentrations normalized to common trophic level using δ 15 N. ► Geographic Hg patterns persist independent of trophic normalization. ► Trophic normalization reduces difference among taxa, but not temporal variability. ► Measuring δ 15 N and δ 13 C improve interpretation of seabird mercury monitoring data. - Normalizing mercury concentrations in seabird eggs to a common trophic level reveals that geographic patterns of mercury contamination exist in the Alaskan marine environment that are independent of food web effects.

Genetic population structure of marine viral haemorrhagic septicaemia virus (VHSV)

DEFF Research Database (Denmark)

Snow, M.; Bain, N.; Black, J.

2004-01-01

The nucleotide sequences of a specific region of the nucleoprotein gene were compared in order to investigate the genetic population structure of marine viral haemorrhagic septicaemia virus (VHSV). Analysis of the sequence from 128 isolates of diverse geographic and host origin renders this the m......The nucleotide sequences of a specific region of the nucleoprotein gene were compared in order to investigate the genetic population structure of marine viral haemorrhagic septicaemia virus (VHSV). Analysis of the sequence from 128 isolates of diverse geographic and host origin renders...... this the most comprehensive molecular epidemiological study of marine VHSV conducted to date. Phylogenetic analysis of nucleoprotein gene sequences confirmed the existence of the 4 major genotypes previously identified based on N- and subsequent G-gene based analyses. The range of Genotype I included subgroups...... of isolates associated with rainbow trout aquaculture (Genotype la) and those from the Baltic marine environment (Genotype Ib) to emphasise the relatively close genetic relationship between these isolates. The existence of an additional genotype circulating within the Baltic Sea (Genotype II) was also...

Creosote treated timber in the Alaskan marine environment : Volume I.

Science.gov (United States)

2010-02-01

ADOT&PF is responsible for many structures that incorporate wood pilings and other timber in Alaska waters. Most are treated with preservative to inhibit marine borers : that will quickly destroy unprotected wood. Creosote is generally the most econo...

Can schooling regulate marine populations and ecosystems?

Science.gov (United States)

Maury, Olivier

2017-08-01

Schools, shoals and swarms are pervasive in the oceans. They have to provide very strong advantages to have been selected and generalized in the course of evolution. Auto-organized groups are usually assumed to provide facilitated encounters of reproduction partners, improved protection against predation, better foraging efficiency, and hydrodynamic gains. However, present theories regarding their evolutionary advantages do not provide an unambiguous explanation to their universality. In particular, the mechanisms commonly proposed to explain grouping provide little support to the formation of very large groups that are common in the sea (e.g. Rieucau et al., 2014). From literature review, data analysis and using a simple mathematical model, I show that large auto-organized groups appear at high population density while only small groups or dispersed individuals remain at low population density. Following, an analysis of tuna tagging data and simple theoretical developments show that large groups are likely to expose individuals to a dramatic decrease of individual foraging success and simultaneous increase of predatory and disease mortality, while small groups avoid those adverse feedbacks and provide maximum foraging success and protection against predation, as it is usually assumed. This would create an emergent density-dependent regulation of marine populations, preventing them from outbursts at high density, and protecting them at low density. This would be a major contribution to their resilience and a crucial process of ecosystems dynamics. A two-step evolutionary process acting at the individual level is proposed to explain how this apparently suicidal behaviour could have been selected and generalized. It explains how grouping would have permitted the emergence of extremely high fecundity life histories, despite their notorious propensity to destabilize populations. The potential implications of the ;grouping feedback; on population resilience, ecosystem

Task 27 -- Alaskan low-rank coal-water fuel demonstration project

Energy Technology Data Exchange (ETDEWEB)

NONE

1995-10-01

Development of coal-water-fuel (CWF) technology has to-date been predicated on the use of high-rank bituminous coal only, and until now the high inherent moisture content of low-rank coal has precluded its use for CWF production. The unique feature of the Alaskan project is the integration of hot-water-drying (HWD) into CWF technology as a beneficiation process. Hot-water-drying is an EERC developed technology unavailable to the competition that allows the range of CWF feedstock to be extended to low-rank coals. The primary objective of the Alaskan Project, is to promote interest in the CWF marketplace by demonstrating the commercial viability of low-rank coal-water-fuel (LRCWF). While commercialization plans cannot be finalized until the implementation and results of the Alaskan LRCWF Project are known and evaluated, this report has been prepared to specifically address issues concerning business objectives for the project, and outline a market development plan for meeting those objectives.

The most vagile host as the main determinant of population connectivity in marine macroparasites

DEFF Research Database (Denmark)

Feis, Marieke; Thieltges, David W.; Jensen, K.T.

2015-01-01

in the sea. Here, we tested whether a marine trematode parasite that utilises migratory birds exhibited weaker population genetic structure than those whose life cycle utilises marine fish as the vagile host. Part of the mitochondrial cytochrome c oxidase 1 (COI) gene was sequenced from individual sporocysts...... that populations of parasites with only freshwater hosts are more structured than those with terrestrial or airborne hosts. Until now, the same has not been tested for marine systems, where, in theory, a fully marine life cycle might sustain high dispersal rates because of the absence of obvious physical barriers...

Geochemical evidences of methane hydrate dissociation in Alaskan Beaufort Margin during Holocene

Science.gov (United States)

Uchida, M.; Rella, S.; Kubota, Y.; Kumata, H.; Mantoku, K.; Nishino, S.; Itoh, M.

2017-12-01

Alaskan Beaufort margin bear large abundances of sub-sea and permafrost methane hydrate[Ruppel, 2016]. During the Last Glacial, previous reported direct and indirect evidences accumulated from geochemical data from marginal sea sediment suggests that methane episodically released from hydrate trapped in the seafloor sediments[Kennett et al., 2000; Uchida et al., 2006, 2008; Cook et al, 2011]. Here we analyzed stable isotopes of foraminifera and molecular marker derived from the activity of methanotrophic bacteria from piston cores collected by the 2010 R/V Mirai cruise in Alaskan Beaufort Margin. Our data showed highly depleted 13C compositions of benthic foraminifera, suggesting indirect records of enhanced incorporation of 13C-depleted CO2 formed by methanotrophic process that use 12C-enriched methane as their main source of carbon. This is the first evidence of methane hydrate dissociation in Alaskan margin. Here we discussed timing of signals of methane dissociation with variability of sea ice and intermediate Atlantic water temperature. The dissociation of methane hydrate in the Alaskan Margin may be modulated by Atlantic warm intermediate water warming. Our results suggest that Arctic marginal regions bearing large amount methane hydrate may be a profound effect on future warming climate changes.

Non-parallel divergence across freshwater and marine three-spined stickleback Gasterosteus aculeatus populations.

Science.gov (United States)

Pujolar, J M; Ferchaud, A L; Bekkevold, D; Hansen, M M

2017-07-01

This work investigated whether multiple freshwater populations of three-spined stickleback Gasterosteus aculeatus in different freshwater catchments in the Jutland Peninsula, Denmark, derived from the same marine populations show repeated adaptive responses. A total of 327 G. aculeatus collected at 13 sampling locations were screened for genetic variation using a combination of 70 genes putatively under selection and 26 neutral genes along with a marker linked to the ectodysplasin gene (eda), which is strongly correlated with plate armour morphs in the species. A highly significant genetic differentiation was found that was higher among different freshwater samples than between marine-freshwater samples. Tests for selection between marine and freshwater populations showed a very low degree of parallelism and no single nucleotide polymorphism was detected as outlier in all freshwater-marine pairwise comparisons, including the eda. This suggests that G. aculeatus is not necessarily the prime example of parallel local adaptation suggested in much of the literature and that important exceptions exist (i.e. the Jutland Peninsula). While marine populations in the results described here showed a high phenotype-genotype correlation at eda, a low association was found for most of the freshwater populations. The most extreme case was found in the freshwater Lake Hald where all low-plated phenotypes were either homozygotes for the allele supposed to be associated with completely plated morphs or heterozygotes, but none were homozygotes for the putative low-plated allele. Re-examination of data from seven G. aculeatus studies agrees in showing a high but partial association between phenotype-genotype at eda in G. aculeatus freshwater populations and that mismatches occur everywhere in the European regions studied (higher in some areas, i.e. Denmark). This is independent of the eda marker used. © 2017 The Fisheries Society of the British Isles.

Population genomics of marine fishes: next generation prospects and challenges

DEFF Research Database (Denmark)

Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Pujolar, J.M.

2014-01-01

Over the past few years, technological advances have facilitated giant leaps forward in our ability to generate genome-wide molecular data, offering exciting opportunities for gaining new insights into the ecology and evolution of species where genomic information is still limited. Marine fishes...... time scales, identifying genomic signatures associated with population divergence under gene flow, and determining the genetic basis of phenotypic traits. We also consider future challenges pertaining to the implementation of genome-wide coverage through next-generation sequencing and genotyping...... methods in marine fishes. Complications associated with fast decay of linkage disequilibrium, as expected for species with large effective population sizes, and the possibility that adaptation is associated with both soft selective sweeps and polygenic selection, leaving complex genomic signatures...

Implications of lifting the ban on the export of Alaskan crude oil

Energy Technology Data Exchange (ETDEWEB)

1990-03-26

Present legislation effectively bans the export of crude oil produced in the United States. The ban has been in effect for years and is particularly stringent with respect to crude oil produced in Alaska, particularly on the North Slope. The Alaska crude export ban is specifically provided for in the Trans-Alaska Pipeline Authorization Act of 1973 and in other legislation. It was imposed for two reasons. The first was to reduce US dependence on imported crude oil. The Arab oil embargo had been imposed shortly before the Act was passed and a greater measure of energy independence was considered imperative at that time. The second reason was to assure that funds expended in building an Alaskan pipeline would benefit domestic users rather than simply employed to facilitate shipments to other countries. The main objective of this report is to estimate the potential impacts on crude oil prices that would result from lifting the export ban Alaskan crude oil. The report focuses on the Japanese market and the US West Coast market. Japan is the principal potential export market for Alaskan crude oil. Exports to that market would also affect the price of Alaskan crude oil as well as crude oil and product prices on the West Coast and the volume of petroleum imported in that area. 3 figs., 8 tabs.

Assay dependence of Brucella antibody prevalence in a declining Alaskan harbor seal (Phoca vitulina population

Directory of Open Access Journals (Sweden)

Hueffer Karsten

2013-01-01

Full Text Available Abstract Background Brucella is a group of bacteria that causes brucellosis, which can affect population health and reproductive success in many marine mammals. We investigated the serological prevalence of antibodies against Brucella bacteria in a declining harbor seal population in Glacier Bay National Park, Alaska. Results Prevalence ranged from 16 to 74 percent for those tests detecting antibodies, indicating that harbor seals in Glacier Bay have been exposed to Brucella bacteria. However, the actual level of serological prevalence could not be determined because results were strongly assay-dependent. Conclusions This study reinforces the need to carefully consider assay choice when comparing different studies on the prevalence of anti–Brucella antibodies in pinnipeds and further highlights the need for species- or taxon-specific assay validation for both pathogen and host species.

Engaging Alaskan Students in Cryospheric Research

Science.gov (United States)

Yoshikawa, K.; Sparrow, E. B.; Kopplin, M.

2011-12-01

The Permafrost/Active Layer Monitoring Program is an ongoing project, which builds on work begun in 2005 to establish long-term permafrost and active layer monitoring sites adjacent to schools in Alaskan communities and in the circumpolar permafrost region. Currently, there are about 200 schools in Alaska involved in the project including also Denali National Park and Preserve. The project has both scientific and outreach components. The monitoring sites collect temperature data on permafrost, and the length and depth of the active layer (the layer above the permafrost that thaws during summer and freezes again during winter). To ensure scientific integrity, the scientist installed all of the monitoring instruments and selected the sites representative of the surrounding biome and thermal conditions. This is a unique collaboration opportunity in that 1) uses scientifically accurate instruments, 2) is scientist led and supervised including instrumentation set-up and data quality check, 3)has teacher/student organized observation network, 4) increased spatial scale of monitoring sites that covers all of the Alaskan communities. Most of the monitoring sites are located in remote communities, where the majority of residents depend on a subsistence lifestyle. Changes in climate, length of seasons, and permafrost conditions directly impact natural resources and subsistence activities. Changes in permafrost conditions also affect local ecosystems and hydrological regimes, and can influence the severity of natural disasters. In addition to extending our knowledge of the arctic environment, the program involves school-age students. Several students have been using the data for their projects and have been inspired to continue their studies. The data gathered from these stations are shared with other schools and made available to the public through our web site (http://www.uaf.edu/permafrost). Also communities have increasingly become interested in this project not only as

Predicting the impacts of anthropogenic disturbances on marine populations

DEFF Research Database (Denmark)

Nabe-Nielsen, Jacob; van Beest, Floris; Grimm, Volker

Marine ecosystems are increasingly exposed to anthropogenic disturbances that cause animals to change behavior and move away from potential foraging grounds. Here we present a process-based modeling framework for assessing population consequences of such sub-lethal behavioral effects. It builds...... on how disturbances influence animal movements, and how this in turn affect their foraging and energetics. The animals’ tendency to move away from disturbances is directly related to the experienced noise level. The reduced foraging in noisy areas affects the animals’ energy budget, fitness...... that determine animal fitness, are expected to have high predictive power in novel environments, making them ideal tools for marine management....

On the stochastic approach to marine population dynamics

Directory of Open Access Journals (Sweden)

Eduardo Ferrandis

2007-03-01

Full Text Available The purpose of this article is to deepen and structure the statistical basis of marine population dynamics. The starting point is the correspondence between the concepts of mortality, survival and lifetime distribution. This is the kernel of the possibilities that survival analysis techniques offer to marine population dynamics. A rigorous definition of survival and mortality based on their properties and their probabilistic versions is briefly presented. Some well established models for lifetime distribution, which generalise the usual simple exponential distribution, might be used with their corresponding survivals and mortalities. A critical review of some published models is also made, including original models proposed in the way opened by Caddy (1991 and Sparholt (1990, which allow for a continuously decreasing natural mortality. Considering these elements, the pure death process dealt with in the literature is used as a theoretical basis for the evolution of a marine cohort. The elaboration of this process is based on Chiang´s study of the probability distribution of the life table (Chiang, 1960 and provides specific structured models for stock evolution as a Markovian process. These models may introduce new ideas in the line of thinking developed by Gudmundsson (1987 and Sampson (1990 in order to model the evolution of a marine cohort by stochastic processes. The suitable approximation of these processes by means of Gaussian processes may allow theoretical and computational multivariate Gaussian analysis to be applied to the probabilistic treatment of fisheries issues. As a consequence, the necessary catch equation appears as a stochastic integral with respect to the mentioned Markovian process of the stock. The solution of this equation is available when the mortalities are proportional, hence the use of the proportional hazards model (Cox, 1959. The assumption of these proportional mortalities leads naturally to the construction of a

Population-specific plasma proteomes of marine and freshwater three-spined sticklebacks (Gasterosteus aculeatus).

Science.gov (United States)

Kültz, Dietmar; Li, Johnathon; Zhang, Xuezhen; Villarreal, Fernando; Pham, Tuan; Paguio, Darlene

2015-12-01

Molecular phenotypes that distinguish resident marine (Bodega Harbor) from landlocked freshwater (FW, Lake Solano) three-spined sticklebacks were revealed by label-free quantitative proteomics. Secreted plasma proteins involved in lipid transport, blood coagulation, proteolysis, plasminogen-activating cascades, extracellular stimulus responses, and immunity are most abundant in this species. Globulins and albumins are much less abundant than in mammalian plasma. Unbiased quantitative proteome profiling identified 45 highly population-specific plasma proteins. Population-specific abundance differences were validated by targeted proteomics based on data-independent acquisition. Gene ontology enrichment analyses and known functions of population-specific plasma proteins indicate enrichment of processes controlling cell adhesion, tissue remodeling, proteolytic processing, and defense signaling in marine sticklebacks. Moreover, fetuin B and leukocyte cell derived chemotaxin 2 are much more abundant in marine fish. These proteins promote bone morphogenesis and likely contribute to population-specific body armor differences. Plasma proteins enriched in FW fish promote translation, heme biosynthesis, and lipid transport, suggesting a greater presence of plasma microparticles. Many prominent population-specific plasma proteins (e.g. apoptosis-associated speck-like protein containing a CARD) lack any homolog of known function or adequate functional characterization. Their functional characterization and the identification of population-specific environmental contexts and selective pressures that cause plasma proteome diversification are future directions emerging from this study. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Alaskan Commodities Irradiation Project

International Nuclear Information System (INIS)

Zarling, J.P.; Swanson, R.B.; Logan, R.R.

1988-01-01

The ninety-ninth US Congress commissioned a six-state food irradiation research and development program to evaluate the commercial potential of this technology. Hawaii, Washington, Iowa, Oklahoma and Florida as well as Alaska have participated in the national program; various food products including fishery products, red meats, tropical and citrus fruits and vegetables have been studied. The purpose of the Alaskan study was to review and evaluate those factors related to the technical and economic feasibility of an irradiator in Alaska. This options analysis study will serve as a basis for determining the state's further involvement in the development of food irradiation technology. 40 refs., 50 figs., 53 tabs

Building a DNA barcode library of Alaska's non-marine arthropods.

Science.gov (United States)

Sikes, Derek S; Bowser, Matthew; Morton, John M; Bickford, Casey; Meierotto, Sarah; Hildebrandt, Kyndall

2017-03-01

Climate change may result in ecological futures with novel species assemblages, trophic mismatch, and mass extinction. Alaska has a limited taxonomic workforce to address these changes. We are building a DNA barcode library to facilitate a metabarcoding approach to monitoring non-marine arthropods. Working with the Canadian Centre for DNA Barcoding, we obtained DNA barcodes from recently collected and authoritatively identified specimens in the University of Alaska Museum (UAM) Insect Collection and the Kenai National Wildlife Refuge collection. We submitted tissues from 4776 specimens, of which 81% yielded DNA barcodes representing 1662 species and 1788 Barcode Index Numbers (BINs), of primarily terrestrial, large-bodied arthropods. This represents 84% of the species available for DNA barcoding in the UAM Insect Collection. There are now 4020 Alaskan arthropod species represented by DNA barcodes, after including all records in Barcode of Life Data Systems (BOLD) of species that occur in Alaska - i.e., 48.5% of the 8277 Alaskan, non-marine-arthropod, named species have associated DNA barcodes. An assessment of the identification power of the library in its current state yielded fewer species-level identifications than expected, but the results were not discouraging. We believe we are the first to deliberately begin development of a DNA barcode library of the entire arthropod fauna for a North American state or province. Although far from complete, this library will become increasingly valuable as more species are added and costs to obtain DNA sequences fall.

Spatial distribution of mercury in southeastern Alaskan streams influenced by glaciers, wetlands, and salmon

International Nuclear Information System (INIS)

Nagorski, Sonia A.; Engstrom, Daniel R.; Hudson, John P.; Krabbenhoft, David P.; Hood, Eran; DeWild, John F.; Aiken, George R.

2014-01-01

Southeastern Alaska is a remote coastal-maritime ecosystem that is experiencing increased deposition of mercury (Hg) as well as rapid glacier loss. Here we present the results of the first reported survey of total and methyl Hg (MeHg) concentrations in regional streams and biota. Overall, streams draining large wetland areas had higher Hg concentrations in water, mayflies, and juvenile salmon than those from glacially-influenced or recently deglaciated watersheds. Filtered MeHg was positively correlated with wetland abundance. Aqueous Hg occurred predominantly in the particulate fraction of glacier streams but in the filtered fraction of wetland-rich streams. Colonization by anadromous salmon in both glacier and wetland-rich streams may be contributing additional marine-derived Hg. The spatial distribution of Hg in the range of streams presented here shows that watersheds are variably, yet fairly predictably, sensitive to atmospheric and marine inputs of Hg. -- Highlights: • We sampled 21 streams in southeastern Alaska for water, sediments, and biota. • Aqueous Hg showed significant relationships with wetlands and DOC. • Biota had higher mercury in wetland-rich streams than in glacier-fed streams. • Spawning salmon appear to contribute methylmercury to stream foodwebs. -- This original survey of mercury concentration and form in southeastern Alaskan streamwater and biota shows substantial spatial variation linked to landscape factors and salmon influence

Acoustics long-term passive monitoring using moored autonomous recorders in the Bering, Chukchi, and Western Beaufort Seas conducted by Alaska Fisheries Scientific Center, National Marine Mammal Laboratory from 2007-08-15 to 2015-04-30 (NCEI Accession 0143303)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The National Marine Mammal Laboratory (NMML) has deployed long-term passive acoustic recorders in various locations in Alaskan waters and in the High Arctic to...

Holocene Paleoceanographic Environments at the Chukchi-Alaskan Margin: Implications for Future Changes

Science.gov (United States)

Polyak, L.; Nam, S. I.; Dipre, G.; Kim, S. Y.; Ortiz, J. D.; Darby, D. A.

2017-12-01

The impacts of the North Pacific oceanic and atmospheric system on the Arctic Ocean result in accelerated sea-ice retreat and related changes in hydrography and biota in the western Arctic. Paleoclimatic records from the Pacific sector of the Arctic are key for understanding the long-term history of these interactions. As opposed to stratigraphically long but strongly compressed sediment cores recovered from the deep Arctic Ocean, sediment depocenters on the Chukchi-Alaskan margin yield continuous, medium to high resolution records formed since the last deglaciation. While early Holocene conditions were non-analogous to modern environments due to the effects of prolonged deglaciation and insufficiently high sea levels, mid to late Holocene sediments are more relevant for recent and modern climate variability. Notably, a large depocenter at the Alaskan margin has sedimentation rates estimated as high as a few millimeters per year, thus providing a decadal to near-annual resolution. This high accumulation can be explained by sediment delivery via the Alaskan Coastal Current originating from the Bering Sea and supposedly controlled by the Aleutian Low pressure center. Preliminary results from sediment cores recovering the last several centuries, along with a comparison with other paleoclimatic proxy records from the Arctic-North Pacific region, indicate a persistent role of the Aleutian Low in the Bering Strait inflow and attendant deposition. More proxy studies are underway to reconstruct the history of this circulation system and its relationship with sea ice extent. The expected results will improve our understanding of natural variability in oceanic and atmospheric conditions at the Chukchi-Alaskan margin, a critical area for modulating the Arctic climate change.

Quaternary sedimentation of the Alaskan Beaufort shelf: Influence of regional tectonics, fluctuating sea levels, and glacial sediment sources

Science.gov (United States)

Dinter, D.A.

1985-01-01

The offshore stratigraphy of the Quaternary Gubik Formation of Arctic Alaska has been studied on high-resolution seismic profiles with a maximum sub-seafloor penetration of about 100 m. In general, marine transgressive subunits of the Gubik Formation are wedge-shaped on the shelf, thickening slightly seaward to the shelf break, beyond which they are offset by landslides and slumps. Beneath the eastern third of the Alaskan Beaufort shelf, active folding has created two persistent structural depressions, the Eastern and Western Wedge Terranes, in which the wedge morphology is especially well developed. The youngest transgressive marine wedge, which was deposited in such a way as to fill these depressions, leaving a generally flat present-day shelf surface, is inferred to be late Wisconsin or younger in age because it overlies a prominent disconformity interpreted to have been formed during the late Wisconsin glacial sea-level minimum. The thickness of this youngest wedge, Unit A, locally exceeds 40 m on the outer shelf, yet apparently relict gravel deposits collected from its seabed surface indicate that the depositional rate is presently quite low on the middle and outer shelf. Lithologies of the gravels are exotic to Alaska, but similar to suites exposed in the Canadian Arctic Islands. These observations suggest a depositional scenario in which the retreating Laurentide Ice Sheet shed sediment-laden icebergs from the Canadian Arctic Islands into the Arctic Ocean following the late Wisconsin glacial maximum. These bergs were then rafted westward by the Beaufort Gyre and grounded on the Alaskan shelf by northeasterly prevailing winds. Especially large numbers of bergs accumulated in the wedge terrane embayments-created as sea level rose-and melted there, filling the embayments with their sedimentary cargo. As glacial retreat slowed, depositional rates on the shelf dwindled. This mode of deposition in the Alaskan Beaufort wedge terranes may be typical of early post

Impact of disability and other physical health issues on academic outcomes among American Indian and Alaskan Native college students: an exploratory analysis.

Science.gov (United States)

Patterson Silver Wolf Adelv Unegv Waya, David A; Vanzile-Tamsen, Carol; Black, Jessica; Billiot, Shanondora M; Tovar, Molly

2015-01-01

This study investigated whether self-identified disabilities among American Indian and Alaskan Native college students impact academic performance and persistence to graduation and explored the differences in health and academic grades between American Indian and Alaskan Native students and students of other racial and ethnic identities using the National College Health Assessment. Findings indicate that American Indian or Alaskan Native students have significantly lower grades than White and Asian students, and American Indian and Alaskan Native women report the highest incidence of health problems of any demographic group. Exploratory results point to future research to determine the full impact of disabilities and poor health on academic success.

A comparison of community and trophic structure in five marine ecosystems based on energy budgets and system metrics

Science.gov (United States)

Gaichas, Sarah; Skaret, Georg; Falk-Petersen, Jannike; Link, Jason S.; Overholtz, William; Megrey, Bernard A.; Gjøsæter, Harald; Stockhausen, William T.; Dommasnes, Are; Friedland, Kevin D.; Aydin, Kerim

2009-04-01

Energy budget models for five marine ecosystems were compared to identify differences and similarities in trophic and community structure. We examined the Gulf of Maine and Georges Bank in the northwest Atlantic Ocean, the combined Norwegian/Barents Seas in the northeast Atlantic Ocean, and the eastern Bering Sea and the Gulf of Alaska in the northeast Pacific Ocean. Comparable energy budgets were constructed for each ecosystem by aggregating information for similar species groups into consistent functional groups. Several ecosystem indices (e.g., functional group production, consumption and biomass ratios, cumulative biomass, food web macrodescriptors, and network metrics) were compared for each ecosystem. The comparative approach clearly identified data gaps for each ecosystem, an important outcome of this work. Commonalities across the ecosystems included overall high primary production and energy flow at low trophic levels, high production and consumption by carnivorous zooplankton, and similar proportions of apex predator to lower trophic level biomass. Major differences included distinct biomass ratios of pelagic to demersal fish, ranging from highest in the combined Norwegian/Barents ecosystem to lowest in the Alaskan systems, and notable differences in primary production per unit area, highest in the Alaskan and Georges Bank/Gulf of Maine ecosystems, and lowest in the Norwegian ecosystems. While comparing a disparate group of organisms across a wide range of marine ecosystems is challenging, this work demonstrates that standardized metrics both elucidate properties common to marine ecosystems and identify key distinctions useful for fisheries management.

An Alaskan legend

Science.gov (United States)

Mann, H.; Blodgett, R.B.

2009-01-01

Jack Lee is a prominent personality, an Alaskan individualist and a skeptic worthy of remembrance if for no other reason than being inextricably associated with the catastrophic Katmai eruption in 1912. Jack remains a provocative reminder of Alaska's pre-1958 drilling and was quite possibly the earliest observer (excepting natives and possibly Russians) of the oil seeps in the area now encompassed by the Becharof National Wildlife Refuge. His observation of the impressive live oil seeps in the Ugashik and Becharof Lakes area, and his subsequent involvement in the early drilling entirely consumed his future interests. He is a firm believer that individualism and suspicion are powerful tools when forced to reconsider alternatives to readily accepted interpretations of modern exploration results. His individualism and sometimes annoying, but thought-provoking skepticism remains useful in any field where clich??s provide safe guards from new concepts.

Aerial surveys of endangered whales in the Alaskan Chukchi and western Beaufort Seas, 1990. Final report, Oct-Nov 90

International Nuclear Information System (INIS)

Moore, S.E.; Clarke, J.T.

1991-06-01

In keeping with the National Environmental Policy Act (1969), the Marine Mammal Protection Act (1972) and the Endangered Species Act (1973), the OCS Lands Act Amendments (1978) established a management policy that included studies in OCS lease sale areas to ascertain potential environmental impacts of oil and gas development on OCS marine coastal environments. The Minerals Management Service (MMS) is the agency responsible for these studies and for the leasing of submerged Federal lands. The report summarizes the 1990 investigations of the distribution, abundance, migration, behavior and habitat relationships of endangered whales in the Alaskan Chukchi and western Beaufort Seas (hereafter, study area); 1990 was the second of a three year (1989-91) study. The Bering Sea stock of bowhead whales (Balaena mysticetus) was the principal species studied, with incidental sightings of all other marine mammals routinely recorded. The 1990 season was compromised by circumstances that restricted the availability of the survey aircraft (Grumman Goose, model G21G) to the period 26 October - 7 November; opportunistic surveys were flown in the study area from 3-25 October. In 1990, there were 14 sightings of 19 bowheads from 9-29 October; 5 whales, including 2 calves, were seen north of the study area. One gray whale, 110 belukhas and 53 polar bears were also seen. Over nine survey seasons (1982-90), there were 240 sightings of 520 bowhead whales and 148 sightings of 398 gray whales

Inorganic and organic contaminants in Alaskan shorebird eggs.

Science.gov (United States)

Saalfeld, David T; Matz, Angela C; McCaffery, Brian J; Johnson, Oscar W; Bruner, Phil; Lanctot, Richard B

2016-05-01

Many shorebird populations throughout North America are thought to be declining, with potential causes attributed to habitat loss and fragmentation, reduced prey availability, increased predation, human disturbance, and increased exposure to environmental pollutants. Shorebirds may be particularly vulnerable to contaminant exposure throughout their life cycle, as they forage primarily on invertebrates in wetlands, where many contaminants accumulate disproportionately in the sediments. Therefore, it is important to document and monitor shorebird populations thought to be at risk and assess the role that environmental contaminants may have on population declines. To investigate potential threats and provide baseline data on shorebird contaminant levels in Alaskan shorebirds, contaminant concentrations were evaluated in shorebird eggs from 16 species residing in seven geographic distinct regions of Alaska. Similar to previous studies, low levels of most inorganic and organic contaminants were found, although concentrations of several inorganic and organic contaminants were higher than those of previous studies. For example, elevated strontium levels were observed in several species, especially black oystercatcher (Haematopus bachmani) sampled in Prince William Sound, Alaska. Additionally, contaminant concentrations varied among species, with significantly higher concentrations of inorganic contaminants found in eggs of pectoral sandpiper (Calidris melanotos), semipalmated sandpiper (Calidris pusilla), black oystercatcher, and bar-tailed godwit (Limosa lapponica). Similarly, significantly higher concentrations of some organic contaminants were found in the eggs of American golden plover (Pluvialis dominica), black-bellied plover (Pluvialis squatarola), pacific golden plover (Pluvialis fulva), bar-tailed godwit, and semipalmated sandpiper. Despite these elevated levels, current concentrations of contaminants in shorebird eggs suggest that breeding environments are

Phlorotannins from Alaskan Seaweed Inhibit Carbolytic Enzyme Activity

Science.gov (United States)

Kellogg, Joshua; Grace, Mary H.; Lila, Mary Ann

2014-01-01

Global incidence of type 2 diabetes has escalated over the past few decades, necessitating a continued search for natural sources of enzyme inhibitors to offset postprandial hyperglycemia. The objective of this study was to evaluate coastal Alaskan seaweed inhibition of α-glucosidase and α-amylase, two carbolytic enzymes involved in serum glucose regulation. Of the six species initially screened, the brown seaweeds Fucus distichus and Alaria marginata possessed the strongest inhibitory effects. F. distichus fractions were potent mixed-mode inhibitors of α-glucosidase and α-amylase, with IC50 values of 0.89 and 13.9 μg/mL, respectively; significantly more efficacious than the pharmaceutical acarbose (IC50 of 112.0 and 137.8 μg/mL, respectively). The activity of F. distichus fractions was associated with phlorotannin oligomers. Normal-phase liquid chromatography-mass spectrometry (NPLC-MS) was employed to characterize individual oligomers. Accurate masses and fragmentation patterns confirmed the presence of fucophloroethol structures with degrees of polymerization from 3 to 18 monomer units. These findings suggest that coastal Alaskan seaweeds are sources of α-glucosidase and α-amylase inhibitory phlorotannins, and thus have potential to limit the release of sugar from carbohydrates and thus alleviate postprandial hyperglycemia. PMID:25341030

Phlorotannins from Alaskan Seaweed Inhibit Carbolytic Enzyme Activity

Directory of Open Access Journals (Sweden)

Joshua Kellogg

2014-10-01

Full Text Available Global incidence of type 2 diabetes has escalated over the past few decades, necessitating a continued search for natural sources of enzyme inhibitors to offset postprandial hyperglycemia. The objective of this study was to evaluate coastal Alaskan seaweed inhibition of α-glucosidase and α-amylase, two carbolytic enzymes involved in serum glucose regulation. Of the six species initially screened, the brown seaweeds Fucus distichus and Alaria marginata possessed the strongest inhibitory effects. F. distichus fractions were potent mixed-mode inhibitors of α-glucosidase and α-amylase, with IC50 values of 0.89 and 13.9 μg/mL, respectively; significantly more efficacious than the pharmaceutical acarbose (IC50 of 112.0 and 137.8 μg/mL, respectively. The activity of F. distichus fractions was associated with phlorotannin oligomers. Normal-phase liquid chromatography-mass spectrometry (NPLC-MS was employed to characterize individual oligomers. Accurate masses and fragmentation patterns confirmed the presence of fucophloroethol structures with degrees of polymerization from 3 to 18 monomer units. These findings suggest that coastal Alaskan seaweeds are sources of α-glucosidase and α-amylase inhibitory phlorotannins, and thus have potential to limit the release of sugar from carbohydrates and thus alleviate postprandial hyperglycemia.

Influence of LAS on marine calanoid copepod population dynamics and potential reproduction

DEFF Research Database (Denmark)

Christoffersen, Kirsten; Hansen, Benni Winding; Johansson, Liselotte Sander

2003-01-01

The toxicity of linear alkyl benzene sulfonate (LAS) to marine invertebrates is well documented under laboratory conditions using single-species tests. It is less known how LAS affects natural populations of aquatic organisms. We hypothesised that LAS was more toxic to the calanoid copepod Acartia...

33 CFR 334.1280 - Bristol Bay, Alaska; air-to-air weapon range, Alaskan Air Command, U.S. Air Force.

Science.gov (United States)

2010-07-01

... 33 Navigation and Navigable Waters 3 2010-07-01 2010-07-01 false Bristol Bay, Alaska; air-to-air weapon range, Alaskan Air Command, U.S. Air Force. 334.1280 Section 334.1280 Navigation and Navigable... REGULATIONS § 334.1280 Bristol Bay, Alaska; air-to-air weapon range, Alaskan Air Command, U.S. Air Force. (a...

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem

2016-06-27

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

Science.gov (United States)

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Fernández de Puelles, María L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Veríssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-06-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Dispersal similarly shapes both population genetics and community patterns in the marine realm

KAUST Repository

Chust, Guillem; Villarino, Ernesto; Chenuil, Anne; Irigoien, Xabier; Bizsel, Nihayet; Bode, Antonio; Broms, Cecilie; Claus, Simon; Ferná ndez de Puelles, Marí a L.; Fonda-Umani, Serena; Hoarau, Galice; Mazzocchi, Maria G.; Mozetič, Patricija; Vandepitte, Leen; Verí ssimo, Helena; Zervoudaki, Soultana; Borja, Angel

2016-01-01

Dispersal plays a key role to connect populations and, if limited, is one of the main processes to maintain and generate regional biodiversity. According to neutral theories of molecular evolution and biodiversity, dispersal limitation of propagules and population stochasticity are integral to shaping both genetic and community structure. We conducted a parallel analysis of biological connectivity at genetic and community levels in marine groups with different dispersal traits. We compiled large data sets of population genetic structure (98 benthic macroinvertebrate and 35 planktonic species) and biogeographic data (2193 benthic macroinvertebrate and 734 planktonic species). We estimated dispersal distances from population genetic data (i.e., FST vs. geographic distance) and from β-diversity at the community level. Dispersal distances ranked the biological groups in the same order at both genetic and community levels, as predicted by organism dispersal ability and seascape connectivity: macrozoobenthic species without dispersing larvae, followed by macrozoobenthic species with dispersing larvae and plankton (phyto- and zooplankton). This ranking order is associated with constraints to the movement of macrozoobenthos within the seabed compared with the pelagic habitat. We showed that dispersal limitation similarly determines the connectivity degree of communities and populations, supporting the predictions of neutral theories in marine biodiversity patterns.

Energy intensive industry for Alaska. Volume I: Alaskan cost factors; market factors; survey of energy-intensive industries

Energy Technology Data Exchange (ETDEWEB)

Swift, W.H.; Clement, M.; Baker, E.G.; Elliot, D.C.; Jacobsen, J.J.; Powers, T.B.; Rohrmann, C.A.; Schiefelbein, G.L.

1978-09-01

The Alaskan and product market factors influencing industry locations in the state are discussed and a survey of the most energy intensive industries was made. Factors external to Alaska that would influence development and the cost of energy and labor in Alaska are analyzed. Industries that are likely to be drawn to Alaska because of its energy resources are analyzed in terms of: the cost of using Alaska energy resources in Alaska as opposed to the Lower 48; skill-adjusted wage and salary differentials between relevant Alaskan areas and the Lower 48; and basic plant and equipment and other operating cost differentials between relevant Alaskan areas and the Lower 48. Screening and evaluation of the aluminum metal industry, cement industry, chlor-alkali industry, lime industry, production of methanol from coal, petroleum refining, and production of petrochemicals and agrichemicals from North Slope natural gas for development are made.

Numerical investigation of the recruitment process in open marine population models

International Nuclear Information System (INIS)

Angulo, O; López-Marcos, J C; López-Marcos, M A; Martínez-Rodríguez, J

2011-01-01

The changes in the dynamics, produced by the recruitment process in an open marine population model, are investigated from a numerical point of view. The numerical method considered, based on the representation of the solution along the characteristic lines, approximates properly the steady states of the model, and is used to analyze the asymptotic behavior of the solutions of the model

Re-emergence of hereditary polyneuropathy in scandinavian alaskan malamute dogs-old enemy or new entity? A case series

DEFF Research Database (Denmark)

Jäderlund, Karin Hultin; Rohdin, Cecilia; Berendt, Mette

2017-01-01

A homozygous mutation has been identified in the N-myc downstream-regulated gene 1 (NDRG1) in recent cases of polyneuropathy in Alaskan malamute dogs from the Nordic countries and USA. The objective of the present study was to determine if cases diagnosed 30-40 years ago with polyneuropathy...... in the Alaskan malamute breed in Norway had the same hereditary disease as the recent cases. Fourteen historical cases and 12 recently diagnosed Alaskan malamute dogs with hereditary polyneuropathy, and their parents and littermates (n = 88) were included in this study (total n = 114). After phenotyping...... of historical and recent cases, NDRG1 genotyping was performed using DNA extracted from archived material from five Norwegian dogs affected by the disease in the late 1970s and 1980s. In addition, pedigrees were analysed. Our study concluded that historical and recent phenotypic polyneuropathy cases were...

Understanding and estimating effective population size for practical application in marine species management.

Science.gov (United States)

Hare, Matthew P; Nunney, Leonard; Schwartz, Michael K; Ruzzante, Daniel E; Burford, Martha; Waples, Robin S; Ruegg, Kristen; Palstra, Friso

2011-06-01

Effective population size (N(e)) determines the strength of genetic drift in a population and has long been recognized as an important parameter for evaluating conservation status and threats to genetic health of populations. Specifically, an estimate of N(e) is crucial to management because it integrates genetic effects with the life history of the species, allowing for predictions of a population's current and future viability. Nevertheless, compared with ecological and demographic parameters, N(e) has had limited influence on species management, beyond its application in very small populations. Recent developments have substantially improved N(e) estimation; however, some obstacles remain for the practical application of N(e) estimates. For example, the need to define the spatial and temporal scale of measurement makes the concept complex and sometimes difficult to interpret. We reviewed approaches to estimation of N(e) over both long-term and contemporary time frames, clarifying their interpretations with respect to local populations and the global metapopulation. We describe multiple experimental factors affecting robustness of contemporary N(e) estimates and suggest that different sampling designs can be combined to compare largely independent measures of N(e) for improved confidence in the result. Large populations with moderate gene flow pose the greatest challenges to robust estimation of contemporary N(e) and require careful consideration of sampling and analysis to minimize estimator bias. We emphasize the practical utility of estimating N(e) by highlighting its relevance to the adaptive potential of a population and describing applications in management of marine populations, where the focus is not always on critically endangered populations. Two cases discussed include the mechanisms generating N(e) estimates many orders of magnitude lower than census N in harvested marine fishes and the predicted reduction in N(e) from hatchery-based population

A low-density SNP array for analyzing differential selection in freshwater and marine populations of threespine stickleback (Gasterosteus aculeatus).

Science.gov (United States)

Ferchaud, Anne-Laure; Pedersen, Susanne H; Bekkevold, Dorte; Jian, Jianbo; Niu, Yongchao; Hansen, Michael M

2014-10-06

The threespine stickleback (Gasterosteus aculeatus) has become an important model species for studying both contemporary and parallel evolution. In particular, differential adaptation to freshwater and marine environments has led to high differentiation between freshwater and marine stickleback populations at the phenotypic trait of lateral plate morphology and the underlying candidate gene Ectodysplacin (EDA). Many studies have focused on this trait and candidate gene, although other genes involved in marine-freshwater adaptation may be equally important. In order to develop a resource for rapid and cost efficient analysis of genetic divergence between freshwater and marine sticklebacks, we generated a low-density SNP (Single Nucleotide Polymorphism) array encompassing markers of chromosome regions under putative directional selection, along with neutral markers for background. RAD (Restriction site Associated DNA) sequencing of sixty individuals representing two freshwater and one marine population led to the identification of 33,993 SNP markers. Ninety-six of these were chosen for the low-density SNP array, among which 70 represented SNPs under putatively directional selection in freshwater vs. marine environments, whereas 26 SNPs were assumed to be neutral. Annotation of these regions revealed several genes that are candidates for affecting stickleback phenotypic variation, some of which have been observed in previous studies whereas others are new. We have developed a cost-efficient low-density SNP array that allows for rapid screening of polymorphisms in threespine stickleback. The array provides a valuable tool for analyzing adaptive divergence between freshwater and marine stickleback populations beyond the well-established candidate gene Ectodysplacin (EDA).

Mind the gut : Genomic insights to population divergence and gut microbial composition of two marine keystone species

NARCIS (Netherlands)

Fietz, Katharina; Rye Hintze, Christian Olaf; Skovrind, Mikkel; Kjærgaard Nielsen, Tue; Limborg, Morten T; Krag, Marcus A; Palsbøll, Per J; Hestbjerg Hansen, Lars; Rask Møller, Peter; Gilbert, M Thomas P

2018-01-01

BACKGROUND: Deciphering the mechanisms governing population genetic divergence and local adaptation across heterogeneous environments is a central theme in marine ecology and conservation. While population divergence and ecological adaptive potential are classically viewed at the genetic level, it

An assessment of educational needs in the Alaskan forest products industry.

Science.gov (United States)

Jon Thomas; Eric Hansen; Allen M. Brackley

2005-01-01

Major changes in federal forest policy in Alaska have resulted in a dramatic downsizing of the state's forest industry. These changes have driven efforts for economic restructuring and improved support for Alaskan communities. The University of Alaska Sitka Forest Products program at the University of Alaska Southeast is one example of efforts to better support...

Spectral Assessment of Soil Properties: Standoff Quantification of Soil Organic Matter Content in Surface Mineral Soils and Alaskan Peat

Science.gov (United States)

2017-08-01

Soil Properties Standoff Quantification of Soil Organic Matter Content in Surface Mineral Soils and Alaskan Peat En gi ne er R es ea rc h an d D...ERDC 6.2 GRE ARTEMIS STO-R DRTSPORE ERDC TR-17-9 August 2017 Spectral Assessment of Soil Properties Standoff Quantification of Soil Organic...Matter Content in Surface Mineral Soils and Alaskan Peat Stacey L. Jarvis, Karen L. Foley, Robert M. Jones, Stephen D. Newman, and Robyn A. Barbato

Multimodel inference to quantify the relative importance of abiotic factors in the population dynamics of marine zooplankton

Science.gov (United States)

Everaert, Gert; Deschutter, Yana; De Troch, Marleen; Janssen, Colin R.; De Schamphelaere, Karel

2018-05-01

The effect of multiple stressors on marine ecosystems remains poorly understood and most of the knowledge available is related to phytoplankton. To partly address this knowledge gap, we tested if combining multimodel inference with generalized additive modelling could quantify the relative contribution of environmental variables on the population dynamics of a zooplankton species in the Belgian part of the North Sea. Hence, we have quantified the relative contribution of oceanographic variables (e.g. water temperature, salinity, nutrient concentrations, and chlorophyll a concentrations) and anthropogenic chemicals (i.e. polychlorinated biphenyls) to the density of Acartia clausi. We found that models with water temperature and chlorophyll a concentration explained ca. 73% of the population density of the marine copepod. Multimodel inference in combination with regression-based models are a generic way to disentangle and quantify multiple stressor-induced changes in marine ecosystems. Future-oriented simulations of copepod densities suggested increased copepod densities under predicted environmental changes.

STUDY OF TRANSPORTATION OF GTL PRODUCTS FROM ALASKAN NORTH SLOPE (ANS) TO MARKETS

Energy Technology Data Exchange (ETDEWEB)

Godwin A. Chukwu, Ph.D., P.E.

2002-09-01

The Alaskan North Slope is one of the largest hydrocarbon reserves in the US where Gas-to-Liquids (GTL) technology can be successfully implemented. The proven and recoverable reserves of conventional natural gas in the developed and undeveloped fields in the Alaskan North Slope (ANS) are estimated to be 38 trillion standard cubic feet (TCF) and estimates of additional undiscovered gas reserves in the Arctic field range from 64 TCF to 142 TCF. Transportation of the natural gas from the remote ANS is the key issue in effective utilization of this valuable and abundance resource. The throughput of oil through the Trans Alaska Pipeline System (TAPS) has been on decline and is expected to continue to decline in future. It is projected that by the year 2015, ANS crude oil production will decline to such a level that there will be a critical need for pumping additional liquid from GTL process to provide an adequate volume for economic operation of TAPS. The pumping of GTL products through TAPS will significantly increase its economic life. Transporting GTL products from the North Slope of Alaska down to the Marine terminal at Valdez is no doubt the great challenge facing the Gas to Liquids options of utilizing the abundant natural gas resource of the North Slope. The primary purpose of this study was to evaluate and assess the economic feasibility of transporting GTL products through the TAPS. Material testing program for GTL and GTL/Crude oil blends was designed and implemented for measurement of physical properties of GTL products. The measurement and evaluation of the properties of these materials were necessary so as to access the feasibility of transporting such materials through TAPS under cold arctic conditions. Results of the tests indicated a trend of increasing yield strength with increasing wax content. GTL samples exhibited high gel strengths at temperatures as high as 20 F, which makes it difficult for cold restart following winter shutdowns. Simplified

NifH- Harboring Bacterial Community Composition Across an Alaskan Permafrost Thaw Gradient

Directory of Open Access Journals (Sweden)

Christopher Ryan Penton

2016-11-01

Full Text Available Since nitrogen (N is often limiting in permafrost soils, we investigated the N2-fixing genetic potential and the inferred taxa harboring those genes by sequencing nifH gene fragments in samples taken along a permafrost thaw gradient in an Alaskan boreal soil. Samples from minimally, moderately and extensively thawed sites were taken to a depth of 79 cm to encompass zones above and below the depth of the water table. NifH reads were translated with frameshift correction and 112,476 sequences were clustered at 5% amino acid dissimilarity resulting in 1,631 OTUs. Sample depth in relation to water table depth was correlated to differences in the NifH sequence classes. NifH sequences most closely related to group I nifH-harboring Alpha- and Beta Proteobacteria were in higher abundance above water table depth while those related to group III nifH-harboring Delta and Gamma Proteobacteria were more abundant below. The most dominant below water table depth NifH sequences, comprising 1/3 of the total, were distantly related to Verrucomicrobia-Opitutaceae. Overall, these results suggest that permafrost thaw alters the class-level composition of N2-fixing communities in the thawed soil layers and that this distinction corresponds to the depth of the water table. These nifH data were also compared to nifH sequences obtained from a study at an Alaskan taiga site, and to those of other geographically distant, non-permafrost sites. The two Alaska sites were differentiated largely by changes in relative abundances of the same OTUs, whereas the non-Alaska sites were differentiated by the lack of many Alaskan OTUs, and the presence of unique halophilic, sulfate- and iron-reducing taxa in the Alaska sites.

Levoglucosan Levels in Alaskan Ice Cores as a Record of Past Wildfires

Science.gov (United States)

Dunham, M. E.; Osterberg, E. C.; Kehrwald, N. M.; Kennedy, J.; Ferris, D. G.

2017-12-01

Glaciers in southeast Alaska are significant contributors to global sea-level rise, and therefore understanding the mechanisms driving their recent mass loss is crucial for predicting future sea-level change. Fire activity in Alaska has increased dramatically during the last decade, adding a potential new source of light-absorbing organic material (soot) to the Juneau Icefield that can reduce albedo and enhance surface melt rates. The goal of this project is to create an accurate record of Alaskan wildfires to understand how Alaskan glacial mass balance is affected by the deposition of organic aerosols from wildfires. Previously, oxalate, ammonia, and potassium ion levels have been used as proxies for past wildfire activity, but these ions all have broader emission sources in addition to wildfires. Here we develop a record of past Alaskan fire events and climate from: (1) levels of a biomass burning indicator, levoglucosan, which only forms when cellulose is burned over 300 °C, (2) major ions including oxalate, ammonia, and potassium; (3) the number and size distribution of particles to quantify trace amounts of soot from wildfires; and (4) stable water isotope ratios as a proxy for past temperature in ice cores. We utilize a total of four shallow ice cores, ranging from 7 to 9 m in length, that were collected by a biogeochemistry team during the Juneau Icefield Research Program (JIRP) in 2016. Complications include our limited understanding of the conservation and degradation of levoglucosan over time or during the firnification process. We hypothesize that particle counts will be correlated with levoglucosan peaks, co-varying with wildfire frequency and temperatures over time. Based on previous work, we also expect to find correlations between levoglucosan and oxalate ion concentrations, even though oxalate ions have sources in addition to wildfire activity.

[Alaskan commodities irradiation project: An options analysis study

International Nuclear Information System (INIS)

Zarling, J.P.; Swanson, R.B.; Logan, R.R.

1989-09-01

The ninety-ninth US Congress commissioned a six-state food irradiation research and development program to evaluate the commercial potential of this technology. Hawaii, Washington, Iowa, Oklahoma and Florida as well as Alaska have participated in the national program; various food products including fishery products, red meats, tropical and citrus fruits and vegetables have been studied. The purpose of the Alaskan study was to review and evaluate those factors related to the technical and economic feasibility of an irradiator in Alaska. This options analysis study will serve as a basis for determining the state's further involvement in the development of food irradiation technology

Exporting Alaskan North Slope crude oil: Benefits and costs

Energy Technology Data Exchange (ETDEWEB)

1994-06-01

The Department of Energy study examines the effects of lifting the current prohibitions against the export of Alaskan North Slope (ANS) crude. The study concludes that permitting exports would benefit the US economy. First, lifting the ban would expand the markets in which ANS oil can be sold, thereby increasing its value. ANS oil producers, the States of California and Alaska, and some of their local governments all would benefit from increased revenues. Permitting exports also would generate new economic activity and employment in California and Alaska. The study concludes that these economic benefits would be achieved without increasing gasoline prices (either in California or in the nation as a whole). Lifting the export ban could have important implications for US maritime interests. The Merchant Marine Act of 1970 (known as the Jones Act) requires all inter-coastal shipments to be carried on vessels that are US-owned, US-crewed, and US-built. By limiting the shipment of ANS crude to US ports only, the export ban creates jobs for the seafarers and the builders of Jones Act vessels. Because the Jones Act does not apply to exports, however, lifting the ban without also changing US maritime law would jeopardize the jobs associated with the current fleet of Jones Act tankers. Therefore the report analyzes selected economic impacts of several maritime policy alternatives, including: Maintaining current law, which allows foreign tankers to carry oil where export is allowed; requiring exports of ANS crude to be carried on Jones Act vessels; and requiring exports of ANS crude to be carried on vessels that are US-owned and US-crewed, but not necessarily US-built. Under each of these options, lifting the export ban would generate economic benefits.

Exporting Alaskan North Slope crude oil: Benefits and costs

International Nuclear Information System (INIS)

1994-06-01

The Department of Energy study examines the effects of lifting the current prohibitions against the export of Alaskan North Slope (ANS) crude. The study concludes that permitting exports would benefit the US economy. First, lifting the ban would expand the markets in which ANS oil can be sold, thereby increasing its value. ANS oil producers, the States of California and Alaska, and some of their local governments all would benefit from increased revenues. Permitting exports also would generate new economic activity and employment in California and Alaska. The study concludes that these economic benefits would be achieved without increasing gasoline prices (either in California or in the nation as a whole). Lifting the export ban could have important implications for US maritime interests. The Merchant Marine Act of 1970 (known as the Jones Act) requires all inter-coastal shipments to be carried on vessels that are US-owned, US-crewed, and US-built. By limiting the shipment of ANS crude to US ports only, the export ban creates jobs for the seafarers and the builders of Jones Act vessels. Because the Jones Act does not apply to exports, however, lifting the ban without also changing US maritime law would jeopardize the jobs associated with the current fleet of Jones Act tankers. Therefore the report analyzes selected economic impacts of several maritime policy alternatives, including: Maintaining current law, which allows foreign tankers to carry oil where export is allowed; requiring exports of ANS crude to be carried on Jones Act vessels; and requiring exports of ANS crude to be carried on vessels that are US-owned and US-crewed, but not necessarily US-built. Under each of these options, lifting the export ban would generate economic benefits

Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean

OpenAIRE

Allers, Elke; Wright, Jody J; Konwar, Kishori M; Howes, Charles G; Beneze, Erica; Hallam, Steven J; Sullivan, Matthew B

2012-01-01

Marine Group A (MGA) is a candidate phylum of Bacteria that is ubiquitous and abundant in the ocean. Despite being prevalent, the structural and functional properties of MGA populations remain poorly constrained. Here, we quantified MGA diversity and population structure in relation to nutrients and O2 concentrations in the oxygen minimum zone (OMZ) of the Northeast subarctic Pacific Ocean using a combination of catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) and ...

Multi-Year Estimates of Regional Alaskan Net CO2 Exchange: Constraining a Remote-Sensing Based Model with Aircraft Observations

Science.gov (United States)

Lindaas, J.; Commane, R.; Luus, K. A.; Chang, R. Y. W.; Miller, C. E.; Dinardo, S. J.; Henderson, J.; Mountain, M. E.; Karion, A.; Sweeney, C.; Miller, J. B.; Lin, J. C.; Daube, B. C.; Pittman, J. V.; Wofsy, S. C.

2014-12-01

The Alaskan region has historically been a sink of atmospheric CO2, but permafrost currently stores large amounts of carbon that are vulnerable to release to the atmosphere as northern high-latitudes continue to warm faster than the global average. We use aircraft CO2 data with a remote-sensing based model driven by MODIS satellite products and validated by CO2 flux tower data to calculate average daily CO2 fluxes for the region of Alaska during the growing seasons of 2012 and 2013. Atmospheric trace gases were measured during CARVE (Carbon in Arctic Reservoirs Vulnerability Experiment) aboard the NASA Sherpa C-23 aircraft. For profiles along the flight track, we couple the Weather Research and Forecasting (WRF) model with the Stochastic Time-Inverted Lagrangian Transport (STILT) model, and convolve these footprints of surface influence with our remote-sensing based model, the Polar Vegetation Photosynthesis Respiration Model (PolarVPRM). We are able to calculate average regional fluxes for each month by minimizing the difference between the data and model column integrals. Our results provide a snapshot of the current state of regional Alaskan growing season net ecosystem exchange (NEE). We are able to begin characterizing the interannual variation in Alaskan NEE and to inform future refinements in process-based modeling that will produce better estimates of past, present, and future pan-Arctic NEE. Understanding if/when/how the Alaskan region transitions from a sink to a source of CO2 is crucial to predicting the trajectory of future climate change.

77 FR 45921 - Alaskan Fuel Hauling as a Restricted Category Special Purpose Flight Operation

Science.gov (United States)

2012-08-02

... operations, each aircraft used to transport fuel will be required to receive FAA certification for the... regulations. The special purpose of Alaskan fuel hauling was considered for aircraft type-certificated under... required for this special purpose. The fuel hauling system must be shown to meet the applicable...

Communicating Risk and Cultivating Resilience in Rural Alaskan Communities: A Multi-Disciplinary Approach to Flood Mitigation

Science.gov (United States)

Kontar, Y. Y.

2014-12-01

The increasing extent and vulnerability of technologically advanced society together with aspects of global climate change intensifies the frequency and severity of natural disasters. Every year, communities around the world face the devastating consequences of hazardous events, including loss of life, property and infrastructure damage, and environmental decline. Environmentally sound strategies have to be developed to minimize these consequences. However, hazard-prone areas differ geographically, climatically, and culturally. There is no a one-size-fits-all solution. Thus, it is crucial that future decision-makers not only know the conditions that make some natural Earth processes hazardous to people, but also understand how people perceive and adjust to potential natural hazards in their regions. In May 2013, an ice jam caused major flooding in Galena, a remote village in interior Alaska. Within two days, flooding destroyed nearly the entire region's infrastructure, and displaced over 400 residents. Almost a year later, a significant part of Galena's population was still evacuated in Fairbanks and other neighboring towns. The rebuilding holdup reflected the federal government's reluctance to spend millions of dollars an the area that may be destroyed again by the next flood. Massive floods inundated towns along the Yukon River before (e.g., Eagle in 2009 and Holycross in 1975), but people return to refurbish and again inhabit the same territories. Rivers have a significant importance to Alaskan rural communities. Not only do rivers provide food, drink, transportation, and in some cases arable land and irrigation, but they also carry cultural significance for the Native Alaskan people. The Galena case study provides a revealing example of challenges of communicating with and educating the public and policy makers about natural hazards.

Microphysical Properties of Alaskan Volcanic Ash

Science.gov (United States)

Puthukkudy, A.; Espinosa, R.; Rocha Lima, A.; Remer, L.; Colarco, P. R.; Whelley, P.; Krotkov, N. A.; Young, K.; Dubovik, O.; Wallace, K.; Martins, J. V.

2017-12-01

Volcanic ash has the potential to cause a variety of severe problems for human health and the environment. Therefore, effective monitoring of the dispersion and fallout from volcanic ash clouds and characterization of the aerosol particle properties are essential. One way to acquire information from volcanic clouds is through satellite remote sensing: such images have greater coverage than ground-based observations and can present a "big picture" perspective. A challenge of remote sensing is that assumptions of certain properties of the target are often a pre-requisite for making accurate and quantitative retrievals. For example, detailed information about size distribution, sphericity, and optical properties of the constituent matter is needed or must be assumed. The same kind of information is also needed for atmospheric transport models to properly simulate the dispersion and fallout of volcanic ash. Presented here is a laboratory method to determine the microphysical and optical properties of volcanic ash samples collected from two Alaskan volcanoes with markedly different compositions. Our method uses a Polarized Imaging Nephelometer (PI-Neph) and a system that re-suspends the particles in an air flow. The PI-Neph measures angular light scattering and polarization of the re-suspended particles from 3o to 175o in scattering angle, with an angular resolution of 1o . Primary measurements include phase function and polarized phase function at three wavelengths (445nm, 532nm, and 661nm). Size distribution, sphericity, and complex refractive index are retrieved indirectly from the PI-Neph measurements using the GRASP (Generalized Retrieval of Aerosol and Surface Properties) inversion algorithm. We report the results of this method applied to samples from the Mt. Okmok (2008) and Mt. Katmai (1912) volcanic eruptions. To our knowledge, this is the first time direct measurements of phase matrix elements of ash from Mt. Okmok and Mt. Katmai have been reported. Retrieved

Effect of Cadmium on the population growth of the marine diatom Chaetoceros gracilis Schutt

Directory of Open Access Journals (Sweden)

Giovana Vera

2014-06-01

Full Text Available Phytoplankton constitutes the base of the trophic webs in the marine environment, so it is important to know the possible effects of pollutants on the algal populations. In the present paper the effect of cadmium on the population growth of the diatom Chaetoceros gracilis was assessed. The microalgae were cultured in the a modified “f/2” Guillard medium, and were exposed to different concentrations of cadmium between 50 and 100000 µg.–1, which produced an inhibitory effect from 20% to 99% on the population growth of Chaetoceros gracilis. Based on the dose (cadmium-response (inhibition relationship, a mean effective concentration (EC50% equal to 591 µg.L–1 of cadmium was obtained.

Do limiting factors at Alaskan treelines shift with climatic regimes?

International Nuclear Information System (INIS)

Ohse, B; Jansen, F; Wilmking, M

2012-01-01

Trees at Alaskan treelines are assumed to be limited by temperature and to expand upslope and/or to higher latitudes with global warming. However, recent studies describe negative temperature responses and drought stress of Alaskan treeline trees in recent decades. In this study, we have analyzed the responses of treeline white spruce to temperature and precipitation according to different climatic regimes in Alaska, described as negative (cool) and positive (warm) phases of the Pacific Decadal Oscillation (PDO). We found that in three consecutive phases (positive from 1925–46, negative from 1947–76, and positive again from 1977–98), the growth responses to temperature and precipitation differed markedly. Before 1947, in a phase of warm winters and with summer temperatures being close to the century mean, the trees at most sites responded positively to summer temperature, as one would expect from treeline trees at northern high latitudes. Between 1947 and 1976, a phase of cold winters and average summers, the trees showed similar responses, but a new pattern of negative responses to the summer temperature of the year prior to growth coupled with positive responses to the precipitation in the same year emerged at some sites. As the precipitation was relatively low at those sites, we assume that drought stress might have played a role. However, the climate responses were not uniform but were modified by regional gradients (trees at northern sites responded more often to temperature than trees at southern sites) and local site conditions (forest trees responded more often to precipitation than treeline trees), possibly reflecting differences in energy and water balance across regions and sites, respectively. However, since the shift in the PDO in 1976 from a negative to a positive phase, the trees’ climate–growth responses are much less pronounced and climate seems to have lost its importance as a limiting factor for the growth of treeline white spruce. If

Linkages between human health and ocean health: a participatory climate change vulnerability assessment for marine mammal harvesters.

Science.gov (United States)

Gadamus, Lily

2013-01-01

Indigenous residents of Alaska's Bering Strait Region depend, both culturally and nutritionally, on ice seal and walrus harvests. Currently, climate change and resultant increases in marine industrial development threaten these species and the cultures that depend on them. To document: (a) local descriptions of the importance of marine mammal hunting; (b) traditional methods for determining if harvested marine mammals are safe to consume; and (c) marine mammal outcomes that would have adverse effects on community health, the perceived causes of these outcomes, strategies for preventing these outcomes and community adaptations to outcomes that cannot be mitigated. Semi-structured interviews and focus groups were conducted with 82 indigenous hunters and elders from the Bering Strait region. Standard qualitative analysis was conducted on interview transcripts, which were coded for both inductive and deductive codes. Responses describing marine mammal food safety and importance are presented using inductively generated categories. Responses describing negative marine mammal outcomes are presented in a vulnerability framework, which links human health outcomes to marine conditions. Project participants perceived that shipping noise and pollution, as well as marine mammal food source depletion by industrial fishing, posed the greatest threats to marine mammal hunting traditions. Proposed adaptations primarily fell into 2 categories: (a) greater tribal influence over marine policy; and (b) documentation of traditional knowledge for local use. This paper presents 1 example of documenting traditional knowledge as an adaptation strategy: traditional methods for determining if marine mammal food is safe to eat. Participant recommendations indicate that 1 strategy to promote rural Alaskan adaptation to climate change is to better incorporate local knowledge and values into decision-making processes. Participant interest in documenting traditional knowledge for local use also

Long-Term Effects of Otitis Media a Ten-Year Cohort Study of Alaskan Eskimo Children

Science.gov (United States)

Kaplan, Gary J.; And Others

1973-01-01

Histories of ear disease, otoscopic examinations, and audiologic, intelligence, and achievement tests were obtained from a cohort of 489 Alaskan Eskimo children, followed through the first 10 years of life, to determine whether otitis media (middle ear inflammation) deleteriously affected intellectual functioning and achievement in school.…

Migration, distribution and population (stock) structure of shallow-water hake (Merluccius capensis) in the Benguela Current Large Marine Ecosystem inferred using a geostatistical population model

DEFF Research Database (Denmark)

Jansen, Teunis; Kristensen, Kasper; Kainge, Paulus Inekela

2016-01-01

Shallow-water hake (Merluccius capensis) is of considerable ecological and economic importance in the Benguela Current Large Marine Ecosystem in South Africa and Namibia. Optimal management of the resource is currently constrained by the limited understanding of migration patterns and population...

Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguanas (Amblyrhynchus cristatus).

Science.gov (United States)

Steinfartz, Sebastian; Glaberman, Scott; Lanterbecq, Deborah; Russello, Michael A; Rosa, Sabrina; Hanley, Torrance C; Marquez, Cruz; Snell, Howard L; Snell, Heidi M; Gentile, Gabriele; Dell'Olmo, Giacomo; Powell, Alessandro M; Caccone, Adalgisa

2009-12-22

Marine iguanas (Amblyrhynchus cristatus) inhabit the coastlines of large and small islands throughout the Galápagos archipelago, providing a rich system to study the spatial and temporal factors influencing the phylogeographic distribution and population structure of a species. Here, we analyze the microevolution of marine iguanas using the complete mitochondrial control region (CR) as well as 13 microsatellite loci representing more than 1200 individuals from 13 islands. CR data show that marine iguanas occupy three general clades: one that is widely distributed across the northern archipelago, and likely spread from east to west by way of the South Equatorial current, a second that is found mostly on the older eastern and central islands, and a third that is limited to the younger northern and western islands. Generally, the CR haplotype distribution pattern supports the colonization of the archipelago from the older, eastern islands to the younger, western islands. However, there are also signatures of recurrent, historical gene flow between islands after population establishment. Bayesian cluster analysis of microsatellite genotypes indicates the existence of twenty distinct genetic clusters generally following a one-cluster-per-island pattern. However, two well-differentiated clusters were found on the easternmost island of San Cristóbal, while nine distinct and highly intermixed clusters were found on youngest, westernmost islands of Isabela and Fernandina. High mtDNA and microsatellite genetic diversity were observed for populations on Isabela and Fernandina that may be the result of a recent population expansion and founder events from multiple sources. While a past genetic study based on pure FST analysis suggested that marine iguana populations display high levels of nuclear (but not mitochondrial) gene flow due to male-biased dispersal, the results of our sex-biased dispersal tests and the finding of strong genetic differentiation between islands do

Potential effects of ocean acidification on Alaskan corals based on calcium carbonate mineralogy composition analysis (NCEI Accession 0157223)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This archival package contains potential effects of ocean acidification on Alaskan corals based on calcium carbonate mineralogy composition analysis. Effects of...

Urban American Indian/Alaskan Natives Compared to Non-Indians in Out-of-Home Care

Science.gov (United States)

Carter, Vernon B.

2011-01-01

Historically, American Indian/Alaskan Native (AI/AN) children have been disproportionately represented in the foster care system. In this study, nationally representative child welfare data from October 1999 was used to compare urban AI/AN children to non-Indian children placed into out-of-home care. Compared to non-Indian children, urban AI/AN…

Understanding the Complex Dimensions of the Digital Divide: Lessons Learned in the Alaskan Arctic

Science.gov (United States)

Subramony, Deepak Prem

2007-01-01

An ethnographic case study of Inupiat Eskimo in the Alaskan Arctic has provided insights into the complex nature of the sociological issues surrounding equitable access to technology tools and skills, which are referred to as the digital divide. These people can overcome the digital divide if they get the basic ready access to hardware and…

Vitamin D-rich marine Inuit diet and markers of inflammation - a population-based survey in Greenland

DEFF Research Database (Denmark)

Schæbel, Louise Kærholm; Bonefeld-Jørgensen, Eva Cecilie; Laurberg, Peter

2015-01-01

The traditional Inuit diet in Greenland consists mainly of fish and marine mammals, rich in vitamin D. Vitamin D has anti-inflammatory capacity but markers of inflammation have been found to be high in Inuit living on a marine diet. Yet, the effect of vitamin D on inflammation in Inuit remains...... unsettled. This led us to investigate the association between vitamin D and markers of inflammation in a population with a high intake of a marine diet. We studied 535 Inuit and non-Inuit living in West and East Greenland. Information concerning dietary habits was obtained by interview-based FFQ. Blood...... samples were drawn for analysis of 25-hydroxyvitamin D, high-sensitivity C-reactive protein (hsCRP) and chitinase-3-like protein 1(YKL-40). Participants were divided into three groups based on degree of intake of the traditional Inuit diet. The diet groups (Inuit diet/mixed diet/imported foods) were...

Ecosystem model of the entire Beaufort Sea marine ecosystem: a tool for assessing food-web structure and ecosystem changes from 1970 to 2014

Science.gov (United States)

Suprenand, P. M.; Hoover, C.

2016-02-01

The Beaufort Sea coastal-marine ecosystem is approximately a 476,000 km2 area in the Arctic Ocean, which extends from -112.5 to -158° longitude to 67.5 to 75° latitude. Within this Arctic Ocean area the United States (Alaskan) indigenous communities of Barrow, Kaktovik, and Nuiqsut, and the Canadian (Northwest Territories) indigenous communities of Aklavik, Inuvik, Tuktoyaktuk, Paulatuk, Ulukhaktok, and Sachs Harbour, subsist by harvesting marine mammals, fish, and invertebrates from the Beaufort Sea to provide the majority of their community foods annually. The ecosystem in which the indigenous communities harvest is considered a polar habitat that includes many specialized species, such as polar bears that rely on sea-ice for foraging activities and denning, or ice algae that are attached to the cryosphere. However, the polar habitat has been experiencing a diminishing sea-ice extent, age, and seasonal duration, with concomitant increases in sea surface temperatures (SSTs), since the 1970s. Changes in sea-ice and SST have consequences to the Beaufort Sea coastal-marine ecosystem, which includes animal habitat losses, alterations to trophodynamics, and impacts to subsistence community harvesting. The present study was aimed at capturing trophodynamic changes in the Beaufort Sea coastal-marine ecosystem from 1970 to 2014 using a fitted spatial-temporal model (Ecopath with Ecosim and Ecospace) that utilizes forcing and mediation functions to describe animal/trophodynamic relationships with sea-ice and sea surface temperature, as well as individual community harvesting efforts. Model outputs reveals similar trends in animals population changes (e.g., increasing bowhead whale stock), changes in apex predator diets (e.g., polar bears eating less ringed seal), and changes in animal distributions (e.g., polar bears remaining closer to land over time). The Beaufort Sea model is a dynamic tool for Arctic Ocean natural resource management in the years to come.

A study of unstable slopes in permafrost areas : Alaskan case studies used as a training tool.

Science.gov (United States)

2011-12-01

This report is the companion to the PowerPoint presentation for the project A Study of Unstable Slopes in Permafrost: Alaskan Case Studies Used as a Training Tool. The objectives of this study are 1) to provide a comprehensive review of literat...

Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

KAUST Repository

Williamson, David H.; Harrison, Hugo B.; Almany, Glenn R.; Berumen, Michael L.; Bode, Michael; Bonin, Mary C.; Choukroun, Severine; Doherty, Peter J.; Frisch, Ashley J.; Saenz-Agudelo, Pablo; Jones, Geoffrey P.

2016-01-01

Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

KAUST Repository

Williamson, David H.

2016-11-15

Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

Population variance in prey, diets and their macronutrient composition in an endangered marine predator, the Franciscana dolphin

Science.gov (United States)

Denuncio, Pablo; Paso Viola, Maria N.; Machovsky-Capuska, Gabriel E.; Raubenheimer, David; Blasina, Gabriela; Machado, Rodrigo; Polizzi, Paula; Gerpe, Marcela; Cappozzo, Humberto L.; Rodriguez, Diego H.

2017-11-01

Disentangling the intricacies governing dietary breadth in wild predators is important for understanding their role in structuring ecological communities and provides critical information for the management and conservation of ecologically threatened species. Here we combined dietary analysis, nutritional composition analysis of prey, literature data and nutritional geometry (right-angled mixture triangle models -RMT-) to examine the diet of the most threatened small cetacean in the western South Atlantic Ocean, the Franciscana dolphin (Pontoporia blainvillei). We applied a recently developed extension of niche theory based on the RMT to help understand the dietary strategies of this species. Our results showed that across their range the Franciscanas consumed prey with variable protein-to-lipid energy ratios (LMM, p < 0.001). In an intensive study of one area, FMA IV, we found that dolphins sub-populations, which recent genetic evidence suggest should be differentiated into three management units, have diets with different protein energy and water mass compositions, but similar protein-to-lipid energy ratios. Furthermore, dolphins from the three areas mixed different combinations of prey in their diets to achieve the observed macronutrient ratios. These results suggest that the different habitats that each sub-population occupies (estuarine, north marine area and south marine) might be associated with different prey composition niches, but similar realized nutritional niches. Future priorities are to better comprehend possible geographical and long-term seasonal effects on prey consumption and dietary breadth of the different Franciscana populations to identify potential impacts (environmental and human-related), enhance the current management strategies to protect this endangered marine predator.

Distribution of hydrocarbon-utilizing microorganisms and hydrocarbon biodegradation potentials in Alaskan continental shelf areas

International Nuclear Information System (INIS)

Roubal, G.; Atlas, R.M.

1978-01-01

Hydrocarbon-utilizing microogranisms were enumerated from Alaskan continental shelf areas by using plate counts and a new most-probable-number procedure based on mineralization of 14 C-labeled hydrocarbons. Hydrocarbon utilizers were ubiquitously distributed, with no significant overall concentration differences between sampling regions or between surface water and sediment samples. There were, however, significant seasonal differences in numbers of hydrocarbon utilizers. Distribution of hydrocarbon utilizers within Cook Inlet was positively correlated with occurrence of hydrocarbons in the environment. Hydrocarbon biodegradation potentials were measured by using 14 C-radiolabeled hydrocarbon-spiked crude oil. There was no significant correlation between numbers of hydrocarbon utilizers and hydrocarbon biodegradation potentials. The biodegradation potentials showed large seasonal variations in the Beaufort Sea, probably due to seasonal depletion of available nutrients. Non-nutrient-limited biodegradation potentials followed the order hexadecane > naphthalene >> pristane > benzanthracene. In Cook Inlet, biodegradation potentials for hexadecane and naphthalene were dependent on availability of inorganic nutrients. Biodegradation potentials for pristane and benzanthracene were restricted, probably by resistance to attack by available enzymes in the indigenous population

Estimating Population Turnover Rates by Relative Quantification Methods Reveals Microbial Dynamics in Marine Sediment.

Science.gov (United States)

Kevorkian, Richard; Bird, Jordan T; Shumaker, Alexander; Lloyd, Karen G

2018-01-01

The difficulty involved in quantifying biogeochemically significant microbes in marine sediments limits our ability to assess interspecific interactions, population turnover times, and niches of uncultured taxa. We incubated surface sediments from Cape Lookout Bight, North Carolina, USA, anoxically at 21°C for 122 days. Sulfate decreased until day 68, after which methane increased, with hydrogen concentrations consistent with the predicted values of an electron donor exerting thermodynamic control. We measured turnover times using two relative quantification methods, quantitative PCR (qPCR) and the product of 16S gene read abundance and total cell abundance (FRAxC, which stands for "fraction of read abundance times cells"), to estimate the population turnover rates of uncultured clades. Most 16S rRNA reads were from deeply branching uncultured groups, and ∼98% of 16S rRNA genes did not abruptly shift in relative abundance when sulfate reduction gave way to methanogenesis. Uncultured Methanomicrobiales and Methanosarcinales increased at the onset of methanogenesis with population turnover times estimated from qPCR at 9.7 ± 3.9 and 12.6 ± 4.1 days, respectively. These were consistent with FRAxC turnover times of 9.4 ± 5.8 and 9.2 ± 3.5 days, respectively. Uncultured Syntrophaceae , which are possibly fermentative syntrophs of methanogens, and uncultured Kazan-3A-21 archaea also increased at the onset of methanogenesis, with FRAxC turnover times of 14.7 ± 6.9 and 10.6 ± 3.6 days. Kazan-3A-21 may therefore either perform methanogenesis or form a fermentative syntrophy with methanogens. Three genera of sulfate-reducing bacteria, Desulfovibrio , Desulfobacter , and Desulfobacterium , increased in the first 19 days before declining rapidly during sulfate reduction. We conclude that population turnover times on the order of days can be measured robustly in organic-rich marine sediment, and the transition from sulfate-reducing to methanogenic conditions stimulates

Impact of jaguar Panthera onca(Carnívora: Felidae predation on marine turtle populations in Tortuguero, Caribbean coast of Costa Rica

Directory of Open Access Journals (Sweden)

Stephanny Arroyo-Arce

2015-09-01

Full Text Available Little is known about the effects of jaguars on the population of marine turtles nesting in Tortuguero National Park, Costa Rica. This study assessed jaguar predation impact on three species of marine turtles (Chelonia mydas, Dermochelys coriáceaand Eretmochelys imbricatathat nest in Tortuguero beach. Jaguar predation data was obtained by using two methodologies, literature review (historical records prior the year 2005 and weekly surveys along the 29 km stretch of beach during the period 2005-2013. Our results indicated that jaguar predation has increased from one marine turtle in 1981 to 198 in 2013. Jaguars consumed annually an average of 120 (SD= 45 and 2 (SD= 3 green turtles and leatherbacks in Tortuguero beach, respectively. Based on our results we concluded that jaguars do not represent a threat to the population of green turtles that nest in Tortuguero beach, and it is not the main cause for population decline for leatherbacks and hawksbills. Future research should focus on continuing to monitor this predator-prey relationship as well as the factors that influence it so the proper management decisions can be taken.

Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguanas (Amblyrhynchus cristatus

Directory of Open Access Journals (Sweden)

Snell Howard L

2009-12-01

Full Text Available Abstract Background Marine iguanas (Amblyrhynchus cristatus inhabit the coastlines of large and small islands throughout the Galápagos archipelago, providing a rich system to study the spatial and temporal factors influencing the phylogeographic distribution and population structure of a species. Here, we analyze the microevolution of marine iguanas using the complete mitochondrial control region (CR as well as 13 microsatellite loci representing more than 1200 individuals from 13 islands. Results CR data show that marine iguanas occupy three general clades: one that is widely distributed across the northern archipelago, and likely spread from east to west by way of the South Equatorial current, a second that is found mostly on the older eastern and central islands, and a third that is limited to the younger northern and western islands. Generally, the CR haplotype distribution pattern supports the colonization of the archipelago from the older, eastern islands to the younger, western islands. However, there are also signatures of recurrent, historical gene flow between islands after population establishment. Bayesian cluster analysis of microsatellite genotypes indicates the existence of twenty distinct genetic clusters generally following a one-cluster-per-island pattern. However, two well-differentiated clusters were found on the easternmost island of San Cristóbal, while nine distinct and highly intermixed clusters were found on youngest, westernmost islands of Isabela and Fernandina. High mtDNA and microsatellite genetic diversity were observed for populations on Isabela and Fernandina that may be the result of a recent population expansion and founder events from multiple sources. Conclusions While a past genetic study based on pure FST analysis suggested that marine iguana populations display high levels of nuclear (but not mitochondrial gene flow due to male-biased dispersal, the results of our sex-biased dispersal tests and the

78 FR 52135 - Takes of Marine Mammals Incidental to Specified Activities; Taking Marine Mammals Incidental To...

Science.gov (United States)

2013-08-22

...--Marine Mammal Density Estimates Density Species (animals/km \\2\\) Bottlenose dolphin \\1\\ 0.455 Atlantic... criteria and thresholds in a final rule on the unintentional taking of marine animals occurring incidental... analysis assumed the marine species populations were 100 percent small animals. The criterion with the...

Economic growth and marine biodiversity: influence of human social structure on decline of marine trophic levels.

Science.gov (United States)

Clausen, Rebecca; York, Richard

2008-04-01

We assessed the effects of economic growth, urbanization, and human population size on marine biodiversity. We used the mean trophic level (MTL) of marine catch as an indicator of marine biodiversity and conducted cross-national time-series analyses (1960-2003) of 102 nations to investigate human social influences on fish catch and trends in MTL. We constructed path models to examine direct and indirect effects relating to marine catch and MTL. Nations' MTLs declined with increased economic growth, increased urbanization, and increased population size, in part because of associated increased catch. These findings contradict the environmental Kuznets curve hypothesis, which claims that economic modernization will reduce human impact on the environment. To make informed decisions on issues of marine resource management, policy makers, nonprofit entities, and professional societies must recognize the need to include social analyses in overall conservation-research strategies. The challenge is to utilize the socioeconomic and ecological research in the service of a comprehensive marine-conservation movement.

Establishing an Alaskan birch syrup industry: Birch Syrup—It’s the Un-maple!TM

Science.gov (United States)

Marlene. Cameron

2001-01-01

Ten years ago a small group of Alaskans began commercial production of birch syrup from the sap of the paper birch, Betula papyrifera, and established an industry that is expanding in response to demand and has the potential to make a significant contribution to Alaska's economy. There are still many problems to be solved; research and...

Sarcocystis arctica (Apicomplexa: Sarcocystidae): ultrastructural description and its new host record, the Alaskan wolf (Canis lupus

Science.gov (United States)

Sarcocystis sarcocysts are common in muscles of herbivores but are rare in muscles of carnivores. Here, we report sarcocysts in muscle of an Alaskan wolf (Canis lupus) from Alaska, USA for the first time. Sarcocysts extracted from tongue of the wolf were up to 900 µm long, slender, and appeared to h...

Dynamics of a Lotka-Volterra type model with applications to marine phage population dynamics

International Nuclear Information System (INIS)

Gavin, C; Pokrovskii, A; Prentice, M; Sobolev, V

2006-01-01

The famous Lotka-Volterra equations play a fundamental role in the mathematical modeling of various ecological and chemical systems. A new modification of these equations has been recently suggested to model the structure of marine phage populations, which are the most abundant biological entities in the biosphere. The purpose of the paper is: (i) to make some methodical remarks concerning this modification; (ii) to discuss new types of canards which arise naturally in this context; (iii) to present results of some numerical experiments

Trophic calculations reveal the mechanism of population-level variation in mercury concentrations between marine ecosystems: Case studies of two polar seabirds

International Nuclear Information System (INIS)

Brasso, Rebecka L.; Polito, Michael J.

2013-01-01

Highlights: • Ecosystem-specific baseline and consumer δ 15 N paired for population-specific trophic level. • Source of population-level variation in mercury exposure identified in two seabirds. • High mercury and trophic position suggests trophic driver of population-level variation. • Trophic similarities, differing mercury reveals geographic differences in bioavailability. -- Abstract: The incorporation of quantitative trophic level analysis in ecotoxicological studies provides explanatory power to identify the factors, trophic or environmental, driving population-level variation in mercury exposure at large geographic scales. In the Antarctic marine ecosystem, mercury concentrations and stable isotope values in Adélie penguins (Pygoscelis adeliae) were compared between the Antarctic Peninsula and the Ross Sea. Correcting tissue δ 15 N values for baseline δ 15 N values revealed population-level differences in trophic position which contributes to differences in mercury. Data from Thick-billed murres (Uria lomvia) were synthesized from published values from Baffin Bay and Svalbard to demonstrate the utility of baseline δ 15 N values in identifying differences in environmental mercury exposure independent of diet. Here, we demonstrate the importance of calculating population-specific trophic level data to uncover the source of variation in mercury concentrations between geographically distinct populations of marine predators

A low-density SNP array for analyzing differential selection in freshwater and marine populations of threespine stickleback (Gasterosteus aculeatus)

DEFF Research Database (Denmark)

Ferchaud, Anne-Laure; Pedersen, Susanne H.; Bekkevold, Dorte

2014-01-01

for rapid and cost efficient analysis of genetic divergence between freshwater and marine sticklebacks, we generated a low-density SNP (Single Nucleotide Polymorphism) array encompassing markers of chromosome regions under putative directional selection, along with neutral markers for background. Results......: RAD (Restriction site Associated DNA) sequencing of sixty individuals representing two freshwater and one marine population led to the identification of 33,993 SNP markers. Ninety-six of these were chosen for the low-density SNP array, among which 70 represented SNPs under putatively directional...... selection in freshwater vs. marine environments, whereas 26 SNPs were assumed to be neutral. Annotation of these regions revealed several genes that are candidates for affecting stickleback phenotypic variation, some of which have been observed in previous studies whereas others are new. Conclusions: We...

The influence of historical climate changes on Southern Ocean marine predator populations: a comparative analysis.

Science.gov (United States)

Younger, Jane L; Emmerson, Louise M; Miller, Karen J

2016-02-01

The Southern Ocean ecosystem is undergoing rapid physical and biological changes that are likely to have profound implications for higher-order predators. Here, we compare the long-term, historical responses of Southern Ocean predators to climate change. We examine palaeoecological evidence for changes in the abundance and distribution of seabirds and marine mammals, and place these into context with palaeoclimate records in order to identify key environmental drivers associated with population changes. Our synthesis revealed two key factors underlying Southern Ocean predator population changes; (i) the availability of ice-free ground for breeding and (ii) access to productive foraging grounds. The processes of glaciation and sea ice fluctuation were key; the distributions and abundances of elephant seals, snow petrels, gentoo, chinstrap and Adélie penguins all responded strongly to the emergence of new breeding habitat coincident with deglaciation and reductions in sea ice. Access to productive foraging grounds was another limiting factor, with snow petrels, king and emperor penguins all affected by reduced prey availability in the past. Several species were isolated in glacial refugia and there is evidence that refuge populations were supported by polynyas. While the underlying drivers of population change were similar across most Southern Ocean predators, the individual responses of species to environmental change varied because of species specific factors such as dispersal ability and environmental sensitivity. Such interspecific differences are likely to affect the future climate change responses of Southern Ocean marine predators and should be considered in conservation plans. Comparative palaeoecological studies are a valuable source of long-term data on species' responses to environmental change that can provide important insights into future climate change responses. This synthesis highlights the importance of protecting productive foraging grounds

Estimating trends of population decline in long-lived marine species in the Mediterranean Sea based on fishers' perceptions.

Directory of Open Access Journals (Sweden)

Francesc Maynou

Full Text Available We conducted interviews of a representative sample of 106 retired fishers in Italy, Spain and Greece, asking specific questions about the trends they perceived in dolphin and shark abundances between 1940 and 1999 (in three 20 year periods compared to the present abundance. The large marine fauna studied were not target species of the commercial fleet segment interviewed (trawl fishery. The fishers were asked to rank the perceived abundance in each period into qualitative ordinal classes based on two indicators: frequency of sightings and frequency of catches (incidental or intentional of each taxonomic group. The statistical analysis of the survey results showed that both incidental catches and the sighting frequency of dolphins have decreased significantly over the 60+ years of the study period (except for in Greece due to the recent population increase. This shows that fishers' perceptions are in agreement with the declining population trends detected by scientists. Shark catches were also perceived to have diminished since the early 1940s for all species. Other long-lived Mediterranean marine fauna (monk seals, whales were at very low levels in the second half of the 20(th century and no quantitative data could be obtained. Our study supports the results obtained in the Mediterranean and other seas that show the rapid disappearance (over a few decades of marine fauna. We show that appropriately designed questionnaires help provide a picture of animal abundance in the past through the valuable perceptions of fishers. This information can be used to complement scientific sources or in some cases be taken as the only information source for establishing population trends in the abundance of sensitive species.

Ecotoxicity of triphenyltin on the marine copepod Tigriopus japonicus at various biological organisations: from molecular to population-level effects.

Science.gov (United States)

Yi, Andy Xianliang; Han, Jeonghoon; Lee, Jae-Seong; Leung, Kenneth M Y

2014-09-01

Triphenyltin compounds (TPTs), as effective biocides for different industrial and agricultural purposes, have been detected in coastal marine environments worldwide, in particular in Asian countries. However, little is known about their toxicity to marine organisms. This study comprehensively investigated the molecular, individual and population responses of the marine copepod, Tigriopus japonicus upon waterborne exposure to TPT chloride (TPTCl). Our results indicated that TPTCl was highly toxic to adult T. japonicus, with a 96-h LC50 concentration at 6.3 μg/L. As shown in a chronic full life-cycle test, T. japonicus exposed to 1.0 μg/L TPTCl exhibited a delay in development and a significant reduction of population growth, in terms of the intrinsic rate of increase (r m ). Based on the negative relationship between the r m and exposure concentration, a critical effect concentration was estimated at 1.6 μg/L TPTCl; at or above which population extinction could occur. At 0.1 μg/L TPTCl or above, the sex ratio of the second generation of the copepod was significantly altered and changed to a male-biased population. At molecular level, the inhibition of the transcriptional expression of glutathione S-transferase related genes might lead to dysfunction of detoxification, and the inhibition of retinoid X receptor mRNA expression implied an interruption of the growth and moulting process in T. japonicus. As the only gene that observed up-regulated in this study, the expression of heat shock protein 70 (hsp70) increased in a concentration-dependent manner, indicating its function in protecting the copepod from TPT-mediated oxidative stress. The study advances our understanding on the ecotoxicity of TPT, and provides some initial data on its toxic mechanisms in small crustaceans like copepods.

Paleoecological studies on variability in marine fish populations: A long-term perspective on the impacts of climatic change on marine ecosystems

Science.gov (United States)

Finney, Bruce P.; Alheit, Jürgen; Emeis, Kay-Christian; Field, David B.; Gutiérrez, Dimitri; Struck, Ulrich

2010-02-01

The use of historical fishing records to understand relationships between climatic change and fish abundance is limited by the relatively short duration of these records, and complications due to the strong influence of human activity in addition to climatic change. Sedimentary records containing scales, bones or geochemical proxies of variability in fish populations provide unique insights on long-term ecosystem dynamics and relationships with climatic change. Available records from Holocene sediments are summarized and synthesized. The records are from several widespread locations near or along the continental margins of the South Atlantic and Pacific oceans, including Alaska, USA (Pacific salmon), Saanich and Effingham Inlets, British Columbia, Canada (pelagic fish), Santa Barbara Basin, California, USA (Northern anchovies and Pacific sardines), Gulf of California, Mexico (Pacific sardines, Northern anchovies and Pacific hake), Peru upwelling system (sardines, anchovies and hake), and Benguela Current System, South Africa (sardines, anchovies and hake). These records demonstrate that fish population sizes are not constant, and varied significantly over a range of time scales prior to the advent of large-scale commercial fishing. In addition to the decadal-scale variability commonly observed in historical records, the long-term records reveal substantial variability over centennial and millennial time scales. Shifts in abundance are often, but not always, correlated with regional and/or global climatic changes. The long-term perspective reveals different patterns of variability in fish populations, as well as fish-climate relationships, than suggested by analysis of historical records. Many records suggest prominent changes in fish abundance at ca. 1000-1200 AD, during the Little Ice Age, and during the transition at the end of the Little Ice Age in the 19th century that may be correlative, and that were likely driven by major hemispheric or global

Projecting Marine Mammal Distribution in a Changing Climate

Directory of Open Access Journals (Sweden)

Gregory K. Silber

2017-12-01

Full Text Available Climate-related shifts in marine mammal range and distribution have been observed in some populations; however, the nature and magnitude of future responses are uncertain in novel environments projected under climate change. This poses a challenge for agencies charged with management and conservation of these species. Specialized diets, restricted ranges, or reliance on specific substrates or sites (e.g., for pupping make many marine mammal populations particularly vulnerable to climate change. High-latitude, predominantly ice-obligate, species have experienced some of the largest changes in habitat and distribution and these are expected to continue. Efforts to predict and project marine mammal distributions to date have emphasized data-driven statistical habitat models. These have proven successful for short time-scale (e.g., seasonal management activities, but confidence that such relationships will hold for multi-decade projections and novel environments is limited. Recent advances in mechanistic modeling of marine mammals (i.e., models that rely on robust physiological and ecological principles expected to hold under climate change may address this limitation. The success of such approaches rests on continued advances in marine mammal ecology, behavior, and physiology together with improved regional climate projections. The broad scope of this challenge suggests initial priorities be placed on vulnerable species or populations (those already experiencing declines or projected to undergo ecological shifts resulting from climate changes that are consistent across climate projections and species or populations for which ample data already exist (with the hope that these may inform climate change sensitivities in less well observed species or populations elsewhere. The sustained monitoring networks, novel observations, and modeling advances required to more confidently project marine mammal distributions in a changing climate will ultimately

The freshwater biodegradation potential of nine Alaskan oils

International Nuclear Information System (INIS)

Blenkinsopp, S.; Segy, G.

1997-01-01

Nine Alaskan representative crude oils and oil products with freshwater spill potential were collected, aged, and incubated in the presence of the standard freshwater inoculum for 28 days at 10 degrees C. Detailed analytical chemistry was performed on all samples to quantify compositional changes. All of the samples tested exhibited measurable hydrocarbon loss as a result of incubation with the freshwater inoculum. Total saturate and total n-alkane biodegradation were greatly enhanced when nutrients were present. The oil products Jet B Fuel and Diesel No. 2 appear to be more biodegradable than the Alaska North Slope and Cook Inlet crude oils tested, while the Bunker C/Diesel mixture appears to be less biodegradable than these crude oils. These results suggest that the screening procedures described here can provide useful information when applying bioremediation technology to the cleanup of selected oiled freshwater environments. 10 refs., 5 tabs., 13 figs

The role of windstorm exposure and yellow cedar decline on landslide susceptibility in southeast Alaskan temperate rainforests

Science.gov (United States)

Brian Buma; Adelaide C. Johnson

2015-01-01

Interactions between ecological disturbances have the potential to alter other disturbances and their associated regimes, such as the likelihood, severity, and extent of events. The influence of exposure to wind and yellow cedar decline on the landslide regime of Alaskan temperate rainforests was explored using presence-only modeling techniques. The wind regime was...

Population differentiation or species formation across the Indian and the Pacific Oceans? An example from the brooding marine hydrozoan Macrorhynchia phoenicea.

Science.gov (United States)

Postaire, Bautisse; Gélin, Pauline; Bruggemann, J Henrich; Pratlong, Marine; Magalon, Hélène

2017-10-01

Assessing population connectivity is necessary to construct effective marine protected areas. This connectivity depends, among other parameters, inherently on species dispersal capacities. Isolation by distance (IBD) is one of the main modes of differentiation in marine species, above all in species presenting low dispersal abilities. This study reports the genetic structuring in the tropical hydrozoan Macrorhynchia phoenicea α ( sensu Postaire et al ., 2016a), a brooding species, from 30 sampling sites in the Western Indian Ocean and the Tropical Southwestern Pacific, using 15 microsatellite loci. At the local scale, genet dispersal relied on asexual propagation at short distance, which was not found at larger scales. Considering one representative per clone, significant positive F IS values (from -0.327*** to 0.411***) were found within almost all sites. Gene flow was extremely low at all spatial scales, among sites within islands (11,000 km distance), with significant pairwise F ST values (from 0.035*** to 0.645***). A general pattern of IBD was found at the Indo-Pacific scale, but also within ecoregions in the Western Indian Ocean province. Clustering and network analyses identified each island as a potential independent population, while analysis of molecular variance indicated that population genetic differentiation was significant at small (within island) and intermediate (among islands within province) spatial scales. As shown by this species, a brooding life cycle might be corollary of the high population differentiation found in some coastal marine species, thwarting regular dispersal at distances more than a few kilometers and probably leading to high cryptic diversity, each island housing independent evolutionary lineages.

The marine side of a terrestrial carnivore: intra-population variation in use of allochthonous resources by arctic foxes.

Directory of Open Access Journals (Sweden)

Arnaud Tarroux

Full Text Available Inter-individual variation in diet within generalist animal populations is thought to be a widespread phenomenon but its potential causes are poorly known. Inter-individual variation can be amplified by the availability and use of allochthonous resources, i.e., resources coming from spatially distinct ecosystems. Using a wild population of arctic fox as a study model, we tested hypotheses that could explain variation in both population and individual isotopic niches, used here as proxy for the trophic niche. The arctic fox is an opportunistic forager, dwelling in terrestrial and marine environments characterized by strong spatial (arctic-nesting birds and temporal (cyclic lemmings fluctuations in resource abundance. First, we tested the hypothesis that generalist foraging habits, in association with temporal variation in prey accessibility, should induce temporal changes in isotopic niche width and diet. Second, we investigated whether within-population variation in the isotopic niche could be explained by individual characteristics (sex and breeding status and environmental factors (spatiotemporal variation in prey availability. We addressed these questions using isotopic analysis and bayesian mixing models in conjunction with linear mixed-effects models. We found that: i arctic fox populations can simultaneously undergo short-term (i.e., within a few months reduction in both isotopic niche width and inter-individual variability in isotopic ratios, ii individual isotopic ratios were higher and more representative of a marine-based diet for non-breeding than breeding foxes early in spring, and iii lemming population cycles did not appear to directly influence the diet of individual foxes after taking their breeding status into account. However, lemming abundance was correlated to proportion of breeding foxes, and could thus indirectly affect the diet at the population scale.

Marine Science

African Journals Online (AJOL)

between humans and the coastal and marine environment. ... The journal has a new and more modern layout, published online only, and the editorial .... the population structure of Platorchestia fayetta sp. nov. and their interaction with the.

Lagrangian Flow Network: a new tool to evaluate connectivity and understand the structural complexity of marine populations

Science.gov (United States)

Rossi, V.; Dubois, M.; Ser-Giacomi, E.; Monroy, P.; Lopez, C.; Hernandez-Garcia, E.

2016-02-01

Assessing the spatial structure and dynamics of marine populations is still a major challenge for ecologists. The necessity to manage marine resources from a large-scale perspective and considering the whole ecosystem is now recognized but the absence of appropriate tools to address these objectives limits the implementation of globally pertinent conservation planning. Inspired from Network Theory, we present a new methodological framework called Lagrangian Flow Network which allows a systematic characterization of multi-scale dispersal and connectivity of early life history stages of marine organisms. The network is constructed by subdividing the basin into an ensemble of equal-area subregions which are interconnected through the transport of propagules by ocean currents. The present version allows the identification of hydrodynamical provinces and the computation of various connectivity proxies measuring retention and exchange of larvae. Due to our spatial discretization and subsequent network representation, as well as our Lagrangian approach, further methodological improvements are handily accessible. These future developments include a parametrization of habitat patchiness, the implementation of realistic larval traits and the consideration of abiotic variables (e.g. temperature, salinity, planktonic resources...) and their effects on larval production and survival. While the model is potentially tunable to any species whose biological traits and ecological preferences are precisely known, it can also be used in a more generic configuration by efficient computing and analysis of a large number of experiments with relevant ecological parameters. It permits a better characterization of population connectivity at multiple scales and it informs its ecological and managerial interpretations.

Sexual dimorphism in relation to big-game hunting and economy in modern human populations.

Science.gov (United States)

Collier, S

1993-08-01

Postcranial skeletal data from two recent Eskimo populations are used to test David Frayer's model of sexual dimorphism reduction in Europe between the Upper Paleolithic and Mesolithic. Frayer argued that a change from big-game hunting and adoption of new technology in the Mesolithic reduced selection for large body size in males and led to a reduction in skeletal sexual dimorphism. Though aspects of Frayer's work have been criticized in the literature, the association of big-game hunting and high sexual dimorphism is untested. This study employs univariate and multivariate analysis to test that association by examining sexual dimorphism of cranial and postcranial bones of two recent Alaskan Eskimo populations, one being big-game (whale and other large marine mammal) hunting people, and the second being salmon fishing, riverine people. While big-game hunting influences skeletal robusticity, it cannot be said to lead to greater sexual dimorphism generally. The two populations had different relative sexual dimorphism levels for different parts of the body. Notably, the big-game hunting (whaling) Eskimos had the lower multivariate dimorphism in the humerus, which could be expected to be the structure under greatest exertion by such hunting in males. While the exertions of the whale hunting economic activities led to high skeletal robusticity, as predicted by Frayer's model, this was true of the females as well as the males, resulting in low sexual dimorphism in some features. Females are half the sexual dimorphism equation, and they cannot be seen as constants in any model of economic behavior.

Hypernatremia in Dice snakes (Natrix tessellata) from a coastal population: implications for osmoregulation in marine snake prototypes.

Science.gov (United States)

Brischoux, François; Kornilev, Yurii V

2014-01-01

The widespread relationship between salt excreting structures (e.g., salt glands) and marine life strongly suggests that the ability to regulate salt balance has been crucial during the transition to marine life in tetrapods. Elevated natremia (plasma sodium) recorded in several marine snakes species suggests that the development of a tolerance toward hypernatremia, in addition to salt gland development, has been a critical feature in the evolution of marine snakes. However, data from intermediate stage (species lacking salt glands but occasionally using salty environments) are lacking to draw a comprehensive picture of the evolution of an euryhaline physiology in these organisms. In this study, we assessed natremia of free-ranging Dice snakes (Natrix tessellata, a predominantly fresh water natricine lacking salt glands) from a coastal population in Bulgaria. Our results show that coastal N. tessellata can display hypernatremia (up to 195.5 mmol x l(-1)) without any apparent effect on several physiological and behavioural traits (e.g., hematocrit, body condition, foraging). More generally, a review of natremia in species situated along a continuum of habitat use between fresh- and seawater shows that snake species display a concomitant tolerance toward hypernatremia, even in species lacking salt glands. Collectively, these data suggest that a physiological tolerance toward hypernatremia has been critical during the evolution of an euryhaline physiology, and may well have preceded the evolution of salt glands.

Hypernatremia in Dice snakes (Natrix tessellata from a coastal population: implications for osmoregulation in marine snake prototypes.

Directory of Open Access Journals (Sweden)

François Brischoux

Full Text Available The widespread relationship between salt excreting structures (e.g., salt glands and marine life strongly suggests that the ability to regulate salt balance has been crucial during the transition to marine life in tetrapods. Elevated natremia (plasma sodium recorded in several marine snakes species suggests that the development of a tolerance toward hypernatremia, in addition to salt gland development, has been a critical feature in the evolution of marine snakes. However, data from intermediate stage (species lacking salt glands but occasionally using salty environments are lacking to draw a comprehensive picture of the evolution of an euryhaline physiology in these organisms. In this study, we assessed natremia of free-ranging Dice snakes (Natrix tessellata, a predominantly fresh water natricine lacking salt glands from a coastal population in Bulgaria. Our results show that coastal N. tessellata can display hypernatremia (up to 195.5 mmol x l(-1 without any apparent effect on several physiological and behavioural traits (e.g., hematocrit, body condition, foraging. More generally, a review of natremia in species situated along a continuum of habitat use between fresh- and seawater shows that snake species display a concomitant tolerance toward hypernatremia, even in species lacking salt glands. Collectively, these data suggest that a physiological tolerance toward hypernatremia has been critical during the evolution of an euryhaline physiology, and may well have preceded the evolution of salt glands.

Response of marine viral populations to a nutrient induced phytoplankton bloom at different pCO2 levels

Directory of Open Access Journals (Sweden)

R.-A. Sandaa

2008-04-01

Full Text Available During the PeECE III mesocosm experiment in 2005 we investigated how the virioplankton community responded to increased levels of nutrients (N and P and CO2. We applied a combination of flow cytometry, Pulsed Field Gel Electrophoresis and degenerate PCR primers to categorize and quantify individual viral populations, and to investigate their temporal dynamics. Species specific and degenerate primers enabled us to identify two specific large dsDNA viruses, EhV and CeV, infecting the haptophytes Emiliania huxleyi and Crysochromulina ericina, respectively. Some of the viral populations detected and enumerated by flow cytometry did not respond to altered CO2-levels, but the abundance of EhV and an unidentified dsDNA virus decreased with increasing CO2 levels. Our results thus indicate that CO2 conditions, or the related change in pH, may affect the marine pelagic food web at the viral level. Our results also demonstrate that in order to unravel ecological problems as how CO2 and nutrient levels affect the relationship between marine algal viruses and their hosts, we need to continue the effort to develop molecular markers used to identify both hosts and viruses.

Connecting Palau's marine protected areas: a population genetic approach to conservation

Science.gov (United States)

Cros, Annick; Toonen, Robert J.; Donahue, Megan J.; Karl, Stephen A.

2017-09-01

Bleaching events are becoming more frequent and are projected to become annual in Micronesia by 2040. To prepare for this threat, the Government of Palau is reviewing its marine protected area network to increase the resilience of the reefs by integrating connectivity into the network design. To support their effort, we used high-throughput sequencing of microsatellites to create genotypes of colonies of the coral Acropora hyacinthus to characterize population genetic structure and dispersal patterns that led to the recovery of Palau's reefs from a 1998 bleaching event. We found no evidence of a founder effect or refugium where colonies may have survived to recolonize the reef. Instead, we found significant pairwise F' st values, indicating population structure and low connectivity among most of the 25 sites around Palau. We used kinship to measure genetic differences at the individual level among sites and found that differences were best explained by the degree of exposure to the ocean [ F 1,20 = 3.015, Pr(> F) = 0.01], but with little of the total variation explained. A permutation test of the pairwise kinship coefficients revealed that there was self-seeding within sites. Overall, the data point to the population of A. hyacinthus in Palau recovering from a handful of surviving colonies with population growth primarily from self-seeding and little exchange among sites. This finding has significant implications for the management strategies for the reefs of Palau, and we recommend increasing the number and distribution of management areas around Palau to capture the genetic architecture and increase the chances of protecting potential refuges in the future.

Purification of Alaskan Walleye Pollock (Gadus chalcogrammus and New Zealand Hoki (Macruronus novaezelandiae Liver Oil Using Short Path Distillation

Directory of Open Access Journals (Sweden)

Alex C. M. Oliveira

2014-05-01

Full Text Available The beneficial health effects of a diet rich in n-3 long chain polyunsaturated fatty acids (n-3 LC-PUFA have been extensively researched in recent years. Marine oils are an important dietary source of n-3 LC-PUFA, being especially rich in two of the most important fatty acids of this class, EPA (eicosapentaenoic acid; 20:5n-3 and DHA (docosahexaenoic acid; 22:6n-3. Oils rich in n-3 LC-PUFA are prone to oxidation that leads to loss of product quality. Alaskan pollock (Gadus chalcogrammus Pallas, 1814 and New Zealand’s hoki (Macruronus novaezelandiae Hector, 1871 are the highest volume fisheries of their respective countries. Both produce large quantities of fishery byproducts, in particular crude or unrefined n-3 LC-PUFA containing oils. Presently these oils are used as ingredients for animal feed, and only limited quantities are used as human nutritional products. The aim of this research was to investigate the applicability of short path distillation for the purification of pollock and hoki oil to produce purified human-grade fish oil to meet quality specifications. Pollock and hoki oils were subjected to short path distillation and a significant decrease in free fatty acids and lipid oxidation (peroxide and para-anisidine values products was observed. Purified oils met the Global Organization for EPA and DHA Omega-3 (GOED standard for edible fish oils.

Purification of Alaskan walleye pollock (Gadus chalcogrammus) and New Zealand hoki (Macruronus novaezelandiae) liver oil using short path distillation.

Science.gov (United States)

Oliveira, Alex C M; Miller, Matthew R

2014-05-22

The beneficial health effects of a diet rich in n-3 long chain polyunsaturated fatty acids (n-3 LC-PUFA) have been extensively researched in recent years. Marine oils are an important dietary source of n-3 LC-PUFA, being especially rich in two of the most important fatty acids of this class, EPA (eicosapentaenoic acid; 20:5n-3) and DHA (docosahexaenoic acid; 22:6n-3). Oils rich in n-3 LC-PUFA are prone to oxidation that leads to loss of product quality. Alaskan pollock (Gadus chalcogrammus Pallas, 1814) and New Zealand's hoki (Macruronus novaezelandiae Hector, 1871) are the highest volume fisheries of their respective countries. Both produce large quantities of fishery byproducts, in particular crude or unrefined n-3 LC-PUFA containing oils. Presently these oils are used as ingredients for animal feed, and only limited quantities are used as human nutritional products. The aim of this research was to investigate the applicability of short path distillation for the purification of pollock and hoki oil to produce purified human-grade fish oil to meet quality specifications. Pollock and hoki oils were subjected to short path distillation and a significant decrease in free fatty acids and lipid oxidation (peroxide and para-anisidine values) products was observed. Purified oils met the Global Organization for EPA and DHA Omega-3 (GOED) standard for edible fish oils.

Seasonal persistence of marine-derived nutrients in south-central Alaskan salmon streams

Science.gov (United States)

Rinella, Daniel J.; Wipfi, Mark S.; Walker, Coowe M.; Stricker, Craig A.; Heintz, Ron A.

2013-01-01

Spawning salmon deliver annual pulses of marine-derived nutrients (MDN) to riverine ecosystems around the Pacific Rim, leading to increased growth and condition in aquatic and riparian biota. The influence of pulsed resources may last for extended periods of time when recipient food webs have effective storage mechanisms, yet few studies have tracked the seasonal persistence of MDN. With this as our goal, we sampled stream water chemistry and selected stream and riparian biota spring through fall at 18 stations (in six watersheds) that vary widely in spawner abundance and at nine stations (in three watersheds) where salmon runs were blocked by waterfalls. We then developed regression models that related dissolved nutrient concentrations and biochemical measures of MDN assimilation to localized spawner density across these 27 stations. Stream water ammonium-N and orthophosphate-P concentrations increased with spawner density during the summer salmon runs, but responses did not persist into the following fall. The effect of spawner density on δ15N in generalist macroinvertebrates and three independent MDN metrics (δ15N, δ34S, and ω3:ω6 fatty acids) in juvenile Dolly Varden (Salvelinus malma) was positive and similar during each season, indicating that MDN levels in biota increased with spawner abundance and were maintained for at least nine months after inputs. Delta 15N in a riparian plant, horsetail (Equisetum fluviatile), and scraper macroinvertebrates did not vary with spawner density in any season, suggesting a lack of MDN assimilation by these lower trophic levels. Our results demonstrate the ready assimilation of MDN by generalist consumers and the persistence of this pulsed subsidy in these organisms through the winter and into the next growing season.

No Evidence of Metabolic Depression in Western Alaskan Juvenile Steller Sea Lions (Eumetopias jubatus)

Science.gov (United States)

Hoopes, Lisa A.; Rea, Lorrie D.; Christ, Aaron; Worthy, Graham A. J.

2014-01-01

Steller sea lion (Eumetopias jubatus) populations have undergone precipitous declines through their western Alaskan range over the last four decades with the leading hypothesis to explain this decline centering around changing prey quality, quantity, or availability for this species (i.e., nutritional stress hypothesis). Under chronic conditions of reduced food intake sea lions would conserve energy by limiting energy expenditures through lowering of metabolic rate known as metabolic depression. To examine the potential for nutritional stress, resting metabolic rate (RMR) and body composition were measured in free-ranging juvenile Steller sea lions (N = 91) at three distinct geographical locations (Southeast Alaska, Prince William Sound, Central Aleutian Islands) using open-flow respirometry and deuterium isotope dilution, respectively. Average sea lion RMR ranged from 6.7 to 36.2 MJ d−1 and was influenced by body mass, total body lipid, and to a lesser extent, ambient air temperature and age. Sea lion pups captured in the Aleutian Islands (region of decline) had significantly greater body mass and total body lipid stores when compared to pups from Prince William Sound (region of decline) and Southeast Alaska (stable region). Along with evidence of robust body condition in Aleutian Island pups, no definitive differences were detected in RMR between sea lions sampled between eastern and western populations that could not be accounted for by higher percent total body lipid content, suggesting that that at the time of this study, Steller sea lions were not experiencing metabolic depression in the locations studied. PMID:24416394

Anthropogenic and natural radionuclides in caribou and muskoxen in the Western Alaskan Arctic and marine fish in the Aleutian Islands in the first half of 2000s

International Nuclear Information System (INIS)

Hong, Gi Hoon; Baskaran, Mark; Molaroni, Shannon Marie; Lee, Hyun-Mi; Burger, Joanna

2011-01-01

A number of caribou and muskoxen samples from the western Alaskan Arctic and fish samples from the Aleutian Islands were collected between 1998 and 2006 and analyzed for anthropogenic ( 90 Sr and 137 Cs) and natural radionculides ( 40 K, 210 Pb and 226 Ra), as part of the radiological assessment for the regional subsistence hunting communities in the first half of 2000s. We examined the relationship between the activities of these nuclides with the size of the fish. In caribou samples, concentration of 90 Sr in muscle was below the detection limit of 0.14 Bq kg -1 and 137 Cs concentration in bones was below the detection limit of 0.15 Bq kg -1 . 137 Cs activity varied over an order of magnitude in caribou muscle samples with an average value of 2.5 Bq/kg wet wt. Average 137 Cs activity in muskoxen muscle was found to be 9.7 Bq/kg wet wt. However, there were a little variation (less than 60%) in 210 Pb, 40 K, and 226 Ra in both muscle and bone of both caribou and muskoxen. The activities of total 210 Pb in caribou and muskox bones were found to be 1-2 orders of magnitude higher than that of parent-supported 210 Pb indicating the potential for dating of bones of terrestrial mammals (time elapsed since the death of the animal) based on the excess 210 Pb method exists. In fish muscle samples, 137 Cs activity varied from below detection limit to 154 mBq/kg wet wt. and its content increased with the size of the fish due to its transfer through the food chain. Among the seven fish species investigated, 210 Pb activities varied almost an order of magnitude; however, 40 K and 226 Ra activities varied less than a factor of two. Total annual effective dose due to 90 Sr and 137 Cs from the ingestion of those terrestrial and marine meats was estimated to be negligible (ca. 9 μSV/a) compared to the natural radionuclides present thus posing negligible radiological threat to humans. - Highlights: → Quantification of radiation dose to humans from the ingestion of fish, muskox

Modelling guided waves in the Alaskan-Aleutian subduction zone

Science.gov (United States)

Coulson, Sophie; Garth, Thomas; Reitbrock, Andreas

2016-04-01

Subduction zone guided wave arrivals from intermediate depth earthquakes (70-300 km depth) have a huge potential to tell us about the velocity structure of the subducting oceanic crust as it dehydrates at these depths. We see guided waves as the oceanic crust has a slower seismic velocity than the surrounding material, and so high frequency energy is retained and delayed in the crustal material. Lower frequency energy is not retained in this crustal waveguide and so travels at faster velocities of the surrounding material. This gives a unique observation at the surface with low frequency energy arriving before the higher frequencies. We constrain this guided wave dispersion by comparing the waveforms recorded in real subduction zones with simulated waveforms, produced using finite difference full waveform modelling techniques. This method has been used to show that hydrated minerals in the oceanic crust persist to much greater depths than accepted thermal petrological subduction zone models would suggest in Northern Japan (Garth & Rietbrock, 2014a), and South America (Garth & Rietbrock, in prep). These observations also suggest that the subducting oceanic mantle may be highly hydrated at intermediate depth by dipping normal faults (Garth & Rietbrock 2014b). We use this guided wave analysis technique to constrain the velocity structure of the down going ~45 Ma Pacific plate beneath Alaska. Dispersion analysis is primarily carried out on guided wave arrivals recorded on the Alaskan regional seismic network. Earthquake locations from global earthquake catalogues (ISC and PDE) and regional earthquake locations from the AEIC (Alaskan Earthquake Information Centre) catalogue are used to constrain the slab geometry and to identify potentially dispersive events. Dispersed arrivals are seen at stations close to the trench, with high frequency (>2 Hz) arrivals delayed by 2 - 4 seconds. This dispersion is analysed to constrain the velocity and width of the proposed waveguide

Biocorrosive Thermophilic Microbial Communities in Alaskan North Slope Oil Facilities

Energy Technology Data Exchange (ETDEWEB)

Duncan, Kathleen E.; Gieg, Lisa M.; Parisi, Victoria A.; Tanner, Ralph S.; Green Tringe, Susannah; Bristow, Jim; Suflita, Joseph M.

2009-09-16

Corrosion of metallic oilfield pipelines by microorganisms is a costly but poorly understood phenomenon, with standard treatment methods targeting mesophilic sulfatereducing bacteria. In assessing biocorrosion potential at an Alaskan North Slope oil field, we identified thermophilic hydrogen-using methanogens, syntrophic bacteria, peptideand amino acid-fermenting bacteria, iron reducers, sulfur/thiosulfate-reducing bacteria and sulfate-reducing archaea. These microbes can stimulate metal corrosion through production of organic acids, CO2, sulfur species, and via hydrogen oxidation and iron reduction, implicating many more types of organisms than are currently targeted. Micromolar quantities of putative anaerobic metabolites of C1-C4 n-alkanes in pipeline fluids were detected, implying that these low molecular weight hydrocarbons, routinely injected into reservoirs for oil recovery purposes, are biodegraded and provide biocorrosive microbial communities with an important source of nutrients.

STARCH/PULP-FIBER BASED PACKAGING FOAMS AND CAST FILMS CONTAINING ALASKAN FISH BY-PRODUCTS (WASTE)

OpenAIRE

Syed H. Imam; Bor-Sen Chiou; Delilah Woods; Justin Shey; Gregory M. Glenn; William J. Orts; Rajnesh Narayan; Robert J. Avena-Bustillos; Tara H. McHugh; Alberto Pantoja; Peter J. Bechtel

2008-01-01

Baked starch/pulp foams were prepared from formulations containing zero to 25 weight percent of processed Alaskan fish by-products that consisted mostly of salmon heads, pollock heads, and pollock frames (bones and associated remains produced in the filleting operation). Fish by-products thermoformed well along with starch and pulp fiber, and the foam product (panels) exhibited useful mechanical properties. Foams with all three fish by-products, ranging between 10 and 15 wt%, showed the highe...

Implicit assumptions underlying simple harvest models of marine bird populations can mislead environmental management decisions.

Science.gov (United States)

O'Brien, Susan H; Cook, Aonghais S C P; Robinson, Robert A

2017-10-01

Assessing the potential impact of additional mortality from anthropogenic causes on animal populations requires detailed demographic information. However, these data are frequently lacking, making simple algorithms, which require little data, appealing. Because of their simplicity, these algorithms often rely on implicit assumptions, some of which may be quite restrictive. Potential Biological Removal (PBR) is a simple harvest model that estimates the number of additional mortalities that a population can theoretically sustain without causing population extinction. However, PBR relies on a number of implicit assumptions, particularly around density dependence and population trajectory that limit its applicability in many situations. Among several uses, it has been widely employed in Europe in Environmental Impact Assessments (EIA), to examine the acceptability of potential effects of offshore wind farms on marine bird populations. As a case study, we use PBR to estimate the number of additional mortalities that a population with characteristics typical of a seabird population can theoretically sustain. We incorporated this level of additional mortality within Leslie matrix models to test assumptions within the PBR algorithm about density dependence and current population trajectory. Our analyses suggest that the PBR algorithm identifies levels of mortality which cause population declines for most population trajectories and forms of population regulation. Consequently, we recommend that practitioners do not use PBR in an EIA context for offshore wind energy developments. Rather than using simple algorithms that rely on potentially invalid implicit assumptions, we recommend use of Leslie matrix models for assessing the impact of additional mortality on a population, enabling the user to explicitly define assumptions and test their importance. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ecodynamics of oil-degrading bacteria and significance of marine mixed populations in the degradation of petroleum compounds

International Nuclear Information System (INIS)

Venkateswaran, Kasthuri; Tanaka, Hiroki; Komukai, Shyoko

1993-01-01

Ecological studies, screening of hydrocarbon-degrading bacteria, and studies of the potentials of various single and mixed bacterial populations in the utilization of petroleum compounds were carried out to understand the microbial hydrocarbon degradation process in marine ecosystems. Populations of hydrocarbon utilizers were larger in coastal regions than in pelagic environments. Ecological observations indicated that oil-degrading bacteria were ubiquitously distributed in both temperate and tropical environments, irrespective of oil-polluted and unpolluted ecosystem. Bacteria were grown with n-tet-radecane, pristane, propylbenzene, phenanthrene, and crude oil as the sole carbon source; and substrate specificities of the purified strains were characterized. Based on the assimilation characteristics of the isolated strains, an artificial mixed-culture system was constructed. Biodegradation of crude oil by the natural mixed population was found to be higher than by the artificial mixed population. However, when some of the substrate-specific degraders were artificially mixed with natural microflora, the degradation of hard-to-degrade aromatic hydrocarbon fractions of crude oil was enhanced

Age, Gender, Biometry, Refractive Error, and the Anterior Chamber Angle among Alaskan Eskimos

Science.gov (United States)

Wojciechowski, Robert; Congdon, Nathan; Anninger, William; Broman, Aimee Teo

2011-01-01

Background The prevalence of angle-closure glaucoma (ACG) is greater for Eskimos/Inuit than it is for any other ethnic group in the world. Although it has been suggested that this prevalence may be due to a population tendency toward shallower anterior chamber angles, available evidence for other populations such as Chinese with high rates of ACG has not consistently demonstrated such a tendency. Methods A reticule, slit-lamp, and standard Goldmann one-mirror goniolens were used to make measurements in the anterior chamber (AC) angle according to a previously reported protocol for biometric gonioscopy (BG) (Ophthalmology 1999;106:2161–7). Measurements were made in all four quadrants of one eye among 133 phakic Alaskan Eskimos aged 40 years and older. Automatic refraction, dilated examination of the anterior segment and optic nerve, and A-scan measurements of AC depth, lens thickness, and axial length were also carried out for all subjects. Results Both central and peripheral AC measurements for the Eskimo subjects were significantly lower than those previously reported by us for Chinese, blacks, and whites under the identical protocol. Eskimos also seemed to have somewhat more hyperopia. There were no differences in biometric measurements between men and women in this Eskimo population. Angle measurements by BG seemed to decline more rapidly over life among Eskimos and Chinese than blacks or whites. Although there was a significant apparent decrease in AC depth, increase in lens thickness, and increase in hyperopia with age among Eskimos, all of these trends seemed to reverse in the seventh decade and beyond. Conclusions Eskimos do seem to have shallower ACs than do other racial groups. Measurements of the AC angle seem to decline more rapidly over life among Eskimos than among blacks or whites, a phenomenon also observed by us among Chinese, another group with high ACG prevalence. This apparent more rapid decline may be due to a cohort effect with higher

Non-electric applications of geothermal energy in six Alaskan towns. Final report, October 1976--November 1977. [Barrow, Huslia, Kiana, Nikolski, Nome, and Wrangell

Energy Technology Data Exchange (ETDEWEB)

Farquhar, J.; Grijalva, R.; Kirkwood, P.

1977-11-01

The potential for direct (non-electric) utilization of local-gradient geothermal energy in six Alaskan towns is summarized. A major objective of this study was to stimulate development and use of the geothermal resource provided by the earth's average thermal gradient, as opposed to the few anomalies that are typically chosen for geothermal development. Hence, six towns for study were selected as being representative of remote Alaskan conditions, rather than for their proximity to known geothermal resources. The moderate-temperature heat available almost everywhere at depths of two to four kilometers into the earth's mantle could satisfy a major portion of the nation's heating requirements--but the cost must be reduced. It is concluded that a geothermal demonstration in Nome would probably be successful and would promote this objective.

Forecasting wildlife response to rapid warming in the Alaskan Arctic

Science.gov (United States)

Van Hemert, Caroline R.; Flint, Paul L.; Udevitz, Mark S.; Koch, Joshua C.; Atwood, Todd C.; Oakley, Karen L.; Pearce, John M.

2015-01-01

Arctic wildlife species face a dynamic and increasingly novel environment because of climate warming and the associated increase in human activity. Both marine and terrestrial environments are undergoing rapid environmental shifts, including loss of sea ice, permafrost degradation, and altered biogeochemical fluxes. Forecasting wildlife responses to climate change can facilitate proactive decisions that balance stewardship with resource development. In this article, we discuss the primary and secondary responses to physical climate-related drivers in the Arctic, associated wildlife responses, and additional sources of complexity in forecasting wildlife population outcomes. Although the effects of warming on wildlife populations are becoming increasingly well documented in the scientific literature, clear mechanistic links are often difficult to establish. An integrated science approach and robust modeling tools are necessary to make predictions and determine resiliency to change. We provide a conceptual framework and introduce examples relevant for developing wildlife forecasts useful to management decisions.

A Formal Messaging Notation for Alaskan Aviation Data

Science.gov (United States)

Rios, Joseph L.

2015-01-01

Data exchange is an increasingly important aspect of the National Airspace System. While many data communication channels have become more capable of sending and receiving data at higher throughput rates, there is still a need to use communication channels efficiently with limited throughput. The limitation can be based on technological issues, financial considerations, or both. This paper provides a complete description of several important aviation weather data in Abstract Syntax Notation format. By doing so, data providers can take advantage of Abstract Syntax Notation's ability to encode data in a highly compressed format. When data such as pilot weather reports, surface weather observations, and various weather predictions are compressed in such a manner, it allows for the efficient use of throughput-limited communication channels. This paper provides details on the Abstract Syntax Notation One (ASN.1) implementation for Alaskan aviation data, and demonstrates its use on real-world aviation weather data samples as Alaska has sparse terrestrial data infrastructure and data are often sent via relatively costly satellite channels.

Use of population viability analysis to evaluate CITES trade-management options for threatened marine fishes.

Science.gov (United States)

Curtis, Janelle M R; Vincent, Amanda C J

2008-10-01

Achieving multiple conservation objectives can be challenging, particularly under high uncertainty. Having agreed to limit seahorse (Hippocampus) exports to sustainable levels, signatories to the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) were offered the option of a single 10-cm minimum size limit (MSL) as an interim management measure for all Hippocampus species (> or =34). Although diverse stakeholders supported the recommended MSL, its biological and socioeconomic implications were not assessed quantitatively. We combined population viability analysis, model sensitivity analysis, and economic information to evaluate the trade-off between conservation threat to and long-term cumulative income from these exploited marine fishes of high conservation concern. We used the European long-snouted seahorse (Hippocampus guttulatus) as a representative species to compare the performance of MSLs set at alternative biological reference points. Our sensitivity analyses showed that in most of our scenarios, setting the MSL just above size at maturity (9.7 cm in H. guttulatus) would not prevent exploited populations from becoming listed as vulnerable. By contrast, the relative risk of decline and extinction were almost halved--at a cost of only a 5.6% reduction in long-term catches--by increasing the MSL to the size reached after at least one full reproductive season. On the basis of our analysis, a precautionary increase in the MSL could be compatible with sustaining fishers' livelihoods and international trade. Such management tactics that aid species conservation and have minimal effects on long term catch trends may help bolster the case for CITES trade management of other valuable marine fishes.

Marine Science

African Journals Online (AJOL)

Mauritius Marine Conservation Society through their. Abstract. While no populations of seals are resident in the tropical Indian Ocean, vagrant animals are occasionally sighted in the region. Here we detail two new sightings of pinnipeds in the Mascarene Islands (Mauritius, Reunion and Rodri- gues) since 1996 and review ...

State-Space Modelling in Marine Science

DEFF Research Database (Denmark)

Albertsen, Christoffer Moesgaard

State-space models provide a natural framework for analysing time series that cannot be observed without error. This is the case for fisheries stock assessments and movement data from marine animals. In fisheries stock assessments, the aim is to estimate the stock size; however, the only data...... available is the number of fish removed from the population and samples on a small fraction of the population. In marine animal movement, accurate position systems such as GPS cannot be used. Instead, inaccurate alternative must be used yielding observations with large errors. Both assessment and individual...... animal movement models are important for management and conservation of marine animals. Consequently, models should be developed to be operational in a management context while adequately evaluating uncertainties in the models. This thesis develops state-space models using the Laplace approximation...

Global conservation priorities for marine turtles.

Directory of Open Access Journals (Sweden)

Bryan P Wallace

Full Text Available Where conservation resources are limited and conservation targets are diverse, robust yet flexible priority-setting frameworks are vital. Priority-setting is especially important for geographically widespread species with distinct populations subject to multiple threats that operate on different spatial and temporal scales. Marine turtles are widely distributed and exhibit intra-specific variations in population sizes and trends, as well as reproduction and morphology. However, current global extinction risk assessment frameworks do not assess conservation status of spatially and biologically distinct marine turtle Regional Management Units (RMUs, and thus do not capture variations in population trends, impacts of threats, or necessary conservation actions across individual populations. To address this issue, we developed a new assessment framework that allowed us to evaluate, compare and organize marine turtle RMUs according to status and threats criteria. Because conservation priorities can vary widely (i.e. from avoiding imminent extinction to maintaining long-term monitoring efforts we developed a "conservation priorities portfolio" system using categories of paired risk and threats scores for all RMUs (n = 58. We performed these assessments and rankings globally, by species, by ocean basin, and by recognized geopolitical bodies to identify patterns in risk, threats, and data gaps at different scales. This process resulted in characterization of risk and threats to all marine turtle RMUs, including identification of the world's 11 most endangered marine turtle RMUs based on highest risk and threats scores. This system also highlighted important gaps in available information that is crucial for accurate conservation assessments. Overall, this priority-setting framework can provide guidance for research and conservation priorities at multiple relevant scales, and should serve as a model for conservation status assessments and priority

Lithospheric Structure across the Alaskan Cordillera from Surface Waves and Receiver Functions

Science.gov (United States)

Ward, K. M.; Lin, F. C.

2017-12-01

The long awaited Transportable Array (TA) deployment in Alaska and western Canada is nearing its final deployment stage. With only one more deployment season, most of the TA station locations have been occupied and begun providing data. These TA stations combined with upgraded existing locations have provided enough high-quality data to begin investigating the crustal and upper mantle structure across the entire Alaskan Cordillera. From a tectonic standpoint, many interesting questions remain unanswered. For example, how does the transition from oceanic-oceanic subduction to continental-oceanic normal subduction to continental-oceanic "flat-slab" subduction to strike-slip conservative plate motion affect the deformation/uplift of the overriding plate and mantle geodynamic characteristics? How does the long and completed terrene accretion process partition stress/strain in the crust? On more local scales, are there any significant mid-crustal magmatic systems as observed in other sections of the American Cordillera, and if so, what is there role in uplift and crustal deformation? Our approach to investigating these questions is though surface wave imaging from ambient noise and earthquake generated sources along with Rayleigh wave ellipticity paired with Ps receiver functions. Our preliminary tomography results agree with previous studies but expand the spatial coverage showing additional detail. Our ellipticity results show a heterogeneous but spatially consistent anisotropic shallow crust. Although the complete TA data set has not yet been collected, we have jointly inverted surface waves with receiver functions for a 3-D shear-wave velocity model across the entire Alaskan Cordillera. Key features of our velocity model include a high-velocity feature in the upper mantle associated with the subducting Pacific plate that extends north of the seismicity used to contour the geometry of the slab and mid-crustal low-velocity zones associated with the active volcanics in

Evidence That Marine Reserves Enhance Resilience to Climatic Impacts

Science.gov (United States)

Micheli, Fiorenza; Saenz-Arroyo, Andrea; Greenley, Ashley; Vazquez, Leonardo; Espinoza Montes, Jose Antonio; Rossetto, Marisa; De Leo, Giulio A.

2012-01-01

Establishment of marine protected areas, including fully protected marine reserves, is one of the few management tools available for local communities to combat the deleterious effect of large scale environmental impacts, including global climate change, on ocean ecosystems. Despite the common hope that reserves play this role, empirical evidence of the effectiveness of local protection against global problems is lacking. Here we show that marine reserves increase the resilience of marine populations to a mass mortality event possibly caused by climate-driven hypoxia. Despite high and widespread adult mortality of benthic invertebrates in Baja California, Mexico, that affected populations both within and outside marine reserves, juvenile replenishment of the species that supports local economies, the pink abalone Haliotis corrugata, remained stable within reserves because of large body size and high egg production of the protected adults. Thus, local protection provided resilience through greater resistance and faster recovery of protected populations. Moreover, this benefit extended to adjacent unprotected areas through larval spillover across the edges of the reserves. While climate change mitigation is being debated, coastal communities have few tools to slow down negative impacts of global environmental shifts. These results show that marine protected areas can provide such protection. PMID:22855690

Evidence that marine reserves enhance resilience to climatic impacts.

Directory of Open Access Journals (Sweden)

Fiorenza Micheli

Full Text Available Establishment of marine protected areas, including fully protected marine reserves, is one of the few management tools available for local communities to combat the deleterious effect of large scale environmental impacts, including global climate change, on ocean ecosystems. Despite the common hope that reserves play this role, empirical evidence of the effectiveness of local protection against global problems is lacking. Here we show that marine reserves increase the resilience of marine populations to a mass mortality event possibly caused by climate-driven hypoxia. Despite high and widespread adult mortality of benthic invertebrates in Baja California, Mexico, that affected populations both within and outside marine reserves, juvenile replenishment of the species that supports local economies, the pink abalone Haliotis corrugata, remained stable within reserves because of large body size and high egg production of the protected adults. Thus, local protection provided resilience through greater resistance and faster recovery of protected populations. Moreover, this benefit extended to adjacent unprotected areas through larval spillover across the edges of the reserves. While climate change mitigation is being debated, coastal communities have few tools to slow down negative impacts of global environmental shifts. These results show that marine protected areas can provide such protection.

Screening Risk Assessment for Possible Radionuclides in the Amchitka Marine Environment

Energy Technology Data Exchange (ETDEWEB)

NNSA/NV

2002-10-31

As part of its environmental stewardship program the U.S. Department of Energy (DOE) is reevaluating three sites where underground nuclear tests were conducted in the deep subsurface of Amchitka Island, Alaska. The tests (i.e., Long Shot, Milrow, and Cannikin) were conducted in 1965, 1969, and 1971, respectively. Extensive investigations were conducted on these tests and their effect on the environment. Evaluations at the time of testing indicated limited release of radionuclides and absence of risk related to the testing; however, these are being reevaluated under the current DOE environmental stewardship program. A screening risk assessment of potential radionuclide release into the marine environment is an important part of this reevaluation. The risk assessment is one of three interrelated activities: a groundwater model and this screening risk assessment, both of which guide the decisions in the third activity, the site closure plan. Thus, the overall objective of the work is to understand, and subsequently manage, any risk to humans and the environment through a closure and long-term stewardship plan. The objective of this screening risk assessment is to predict whether possible releases of radionuclides at the ocean floor would represent potential risks to Native Alaskans by consumption of marine subsistence species. In addition, risks were predicted for consumers of commercial catches of marine organisms. These risks were calculated beginning with estimates of possible radionuclide release at the seafloor (from a groundwater modeling study), into the seawater, through possible uptake by marine organisms, and finally possible consumption by humans. The risk assessment model has 11 elements, progressing from potential release at the seafloor through water and food chains to human intake. Data for each of these elements were systematically found and synthesized from many sources, and represent the best available knowledge. Whenever precise data were lacking

Seismic array processing and computational infrastructure for improved monitoring of Alaskan and Aleutian seismicity and volcanoes

Science.gov (United States)

Lindquist, Kent Gordon

We constructed a near-real-time system, called Iceworm, to automate seismic data collection, processing, storage, and distribution at the Alaska Earthquake Information Center (AEIC). Phase-picking, phase association, and interprocess communication components come from Earthworm (U.S. Geological Survey). A new generic, internal format for digital data supports unified handling of data from diverse sources. A new infrastructure for applying processing algorithms to near-real-time data streams supports automated information extraction from seismic wavefields. Integration of Datascope (U. of Colorado) provides relational database management of all automated measurements, parametric information for located hypocenters, and waveform data from Iceworm. Data from 1997 yield 329 earthquakes located by both Iceworm and the AEIC. Of these, 203 have location residuals under 22 km, sufficient for hazard response. Regionalized inversions for local magnitude in Alaska yield Msb{L} calibration curves (logAsb0) that differ from the Californian Richter magnitude. The new curve is 0.2\\ Msb{L} units more attenuative than the Californian curve at 400 km for earthquakes north of the Denali fault. South of the fault, and for a region north of Cook Inlet, the difference is 0.4\\ Msb{L}. A curve for deep events differs by 0.6\\ Msb{L} at 650 km. We expand geographic coverage of Alaskan regional seismic monitoring to the Aleutians, the Bering Sea, and the entire Arctic by initiating the processing of four short-period, Alaskan seismic arrays. To show the array stations' sensitivity, we detect and locate two microearthquakes that were missed by the AEIC. An empirical study of the location sensitivity of the arrays predicts improvements over the Alaskan regional network that are shown as map-view contour plots. We verify these predictions by detecting an Msb{L} 3.2 event near Unimak Island with one array. The detection and location of four representative earthquakes illustrates the expansion

ORTHOMYXO- AND PARAMYXOVIRUSES IN MARINE MAMMALS

Directory of Open Access Journals (Sweden)

Marina G. Gulyaeva

2018-01-01

Full Text Available Abstract. Aim. Marine mammals play the role of "sentries", standing guard over the health and functioning of marine ecosystems. The analysis of data reported in literature was carried out to understand and to evaluate a circulation of representatives of the Orthomyxoviridae and Paramyxoviridae, dangerous pathogens capable to cause morbidity and mortality in marine warm-blooded animals. Discussion. In the population of marine animals, in the available literature, no more than twenty infectious diseases were described. At the same time, according to preliminary estimates, about 15% of marine mammals die from indicated diseases. Previous studies conducted by various groups of scientists have already shown the circulation of various viral pathogens, which cause different infections in these animals. The present fact indicates the important role of marine mammals in the ecology and spreading of a number of viruses. In accordance with a literature data, representatives of Orthomixoviruses and Paramyxoviruses are among the most dangerous pathogens, which may infect this type of animals. Thus, it was suggested that seals may be infected with a wide range of influenza viruses without prior adaptation. It was emphasized that pinnipeds are one of the reservoir of a human influenza B virus in nature. Infections caused by morbilliviruses, can be the reason of epizootics in a population of seals and among the other species of marine mammals. Signs of a disease are similar to the clinic of carnivore plague. Main conclusions. The data presented in literature is extremely not enough for fully understanding a role of marine mammals as hosts or carriers of potential zoonotic pathogens, such as avian influenza virus (AIV, morbilliviruses and others. Thus, this issue requires further more detailed study.

Environmental forcing and Southern Ocean marine predator populations: effects of climate change and variability.

Science.gov (United States)

Trathan, P N; Forcada, J; Murphy, E J

2007-12-29

The Southern Ocean is a major component within the global ocean and climate system and potentially the location where the most rapid climate change is most likely to happen, particularly in the high-latitude polar regions. In these regions, even small temperature changes can potentially lead to major environmental perturbations. Climate change is likely to be regional and may be expressed in various ways, including alterations to climate and weather patterns across a variety of time-scales that include changes to the long interdecadal background signals such as the development of the El Niño-Southern Oscillation (ENSO). Oscillating climate signals such as ENSO potentially provide a unique opportunity to explore how biological communities respond to change. This approach is based on the premise that biological responses to shorter-term sub-decadal climate variability signals are potentially the best predictor of biological responses over longer time-scales. Around the Southern Ocean, marine predator populations show periodicity in breeding performance and productivity, with relationships with the environment driven by physical forcing from the ENSO region in the Pacific. Wherever examined, these relationships are congruent with mid-trophic-level processes that are also correlated with environmental variability. The short-term changes to ecosystem structure and function observed during ENSO events herald potential long-term changes that may ensue following regional climate change. For example, in the South Atlantic, failure of Antarctic krill recruitment will inevitably foreshadow recruitment failures in a range of higher trophic-level marine predators. Where predator species are not able to accommodate by switching to other prey species, population-level changes will follow. The Southern Ocean, though oceanographically interconnected, is not a single ecosystem and different areas are dominated by different food webs. Where species occupy different positions in

Conservation Status of Marine Biodiversity in Oceania: An Analysis of Marine Species on the IUCN Red List of Threatened Species

Directory of Open Access Journals (Sweden)

Beth A. Polidoro

2011-01-01

Full Text Available Given the economic and cultural dependence on the marine environment in Oceania and a rapidly expanding human population, many marine species populations are in decline and may be vulnerable to extinction from a number of local and regional threats. IUCN Red List assessments, a widely used system for quantifying threats to species and assessing species extinction risk, have been completed for 1190 marine species in Oceania to date, including all known species of corals, mangroves, seagrasses, sea snakes, marine mammals, sea birds, sea turtles, sharks, and rays present in Oceania, plus all species in five important perciform fish groups. Many of the species in these groups are threatened by the modification or destruction of coastal habitats, overfishing from direct or indirect exploitation, pollution, and other ecological or environmental changes associated with climate change. Spatial analyses of threatened species highlight priority areas for both site- and species-specific conservation action. Although increased knowledge and use of newly available IUCN Red List assessments for marine species can greatly improve conservation priorities for marine species in Oceania, many important fish groups are still in urgent need of assessment.

Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans

DEFF Research Database (Denmark)

Moreno-Mayar, J Víctor; Potter, Ben A; Vinner, Lasse

2017-01-01

Despite broad agreement that the Americas were initially populated via Beringia, the land bridge that connected far northeast Asia with northwestern North America during the Pleistocene epoch, when and how the peopling of the Americas occurred remains unresolved. Analyses of human remains from La...

Brucella Antibodies in Alaskan True Seals and Eared Seals—Two Different Stories

Directory of Open Access Journals (Sweden)

Ingebjørg H. Nymo

2018-01-01

Full Text Available Brucella pinnipedialis was first isolated from true seals in 1994 and from eared seals in 2008. Although few pathological findings have been associated with infection in true seals, reproductive pathology including abortions, and the isolation of the zoonotic strain type 27 have been documented in eared seals. In this study, a Brucella enzyme-linked immunosorbent assay (ELISA and the Rose Bengal test (RBT were initially compared for 206 serum samples and a discrepancy between the tests was found. Following removal of lipids from the serum samples, ELISA results were unaltered while the agreement between the tests was improved, indicating that serum lipids affected the initial RBT outcome. For the remaining screening, we used ELISA to investigate the presence of Brucella antibodies in sera of 231 eared and 1,412 true seals from Alaskan waters sampled between 1975 and 2011. In eared seals, Brucella antibodies were found in two Steller sea lions (Eumetopias jubatus (2% and none of the 107 Northern fur seals (Callorhinus ursinus. The low seroprevalence in eared seals indicate a low level of exposure or lack of susceptibility to infection. Alternatively, mortality due to the Brucella infection may remove seropositive animals from the population. Brucella antibodies were detected in all true seal species investigated; harbor seals (Phoca vitulina (25%, spotted seals (Phoca largha (19%, ribbon seals (Histriophoca fasciata (16%, and ringed seals (Pusa hispida hispida (14%. There was a low seroprevalence among pups, a higher seroprevalence among juveniles, and a subsequent decreasing probability of seropositivity with age in harbor seals. Similar patterns were present for the other true seal species; however, solid conclusions could not be made due to sample size. This pattern is in accordance with previous reports on B. pinnipedialis infections in true seals and may suggest environmental exposure to B. pinnipedialis at the juvenile stage, with a

PIR Marine Turtle Nesting

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Effective management of marine turtle data is essential to maximize their research value and enable timely population assessments and recovery monitoring. To provide...

PIR Marine Turtle Strandings

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Effective management of marine turtle data is essential to maximize their research value and enable timely population assessments and recovery monitoring. To provide...

Marine disposal of radioactive wastes

International Nuclear Information System (INIS)

Woodhead, D.S.

1980-01-01

In a general sense, the main attraction of the marine environment as a repository for the wastes generated by human activities lies in the degree of dispersion and dilution which is readily attainable. However, the capacity of the oceans to receive wastes without unacceptable consequences is clearly finite and this is even more true of localized marine environments such as estuaries, coastal waters and semi-enclosed seas. Radionuclides have always been present in the marine environment and marine organisms and humans consuming marine foodstuffs have always been exposed, to some degree, to radiation from this source. The hazard associated with ionizing radiations is dependent upon the adsorption of energy from the radiation field within some biological entity. Thus any disposal of radioactive wastes into the marine environment has consequences, the acceptability of which must be assessed in terms of the possible resultant increase in radiation exposure of human and aquatic populations. In the United Kingdom the primary consideration has been and remains the safe-guarding of public health. The control procedures are therefore designed to minimize as far as practicable the degree of human exposure within the overall limits recommended as acceptable by the International Commission on Radiological Protection. There are several approaches through which control could be exercised and the strenghs and weaknesses of each are considered. In this review the detailed application of the critical path technique to the control of the discharge into the north-east Irish Sea from the fuel reprocessing plant at Windscale is given as a practical example. It will be further demonstrated that when human exposure is controlled in this way no significant risk attaches to the increased radiation exposure experienced by populations of marine organisms in the area. (orig.) [de

Anti-infective Discorhabdins from a Deep-Water Alaskan Sponge of the Genus Latrunculia†

Science.gov (United States)

Na, MinKyun; Ding, Yuanqing; Wang, Bin; Tekwani, Babu L.; Schinazi, Raymond F.; Franzblau, Scott; Kelly, Michelle; Stone, Robert; Li, Xing-Cong; Ferreira, Daneel; Hamann, Mark T.

2016-01-01

Bioassay- and LC-MS-guided fractionation of a methanol extract from a new deep-water Alaskan sponge species of the genus Latrunculia resulted in the isolation of two new brominated pyrroloiminoquinones, dihydrodiscorhabdin B (1) and discorhabdin Y (2), along with six known pyrroloiminoquinone alkaloids, discorhabdins A (3), C (4), E (5), and L (6), dihydrodiscorhabdin C (7), and the benzene derivative 8. Compounds 3, 4, and 7 exhibited anti-HCV activity, antimalarial activity, and selective antimicrobial activity. Although compounds 3 and 7 displayed potent and selective in vitro antiprotozoal activity, Plasmodium berghei-infected mice did not respond to these metabolites due to their toxicity in vivo. PMID:20337497

Anti-infective discorhabdins from a deep-water alaskan sponge of the genus Latrunculia.

Science.gov (United States)

Na, Minkyun; Ding, Yuanqing; Wang, Bin; Tekwani, Babu L; Schinazi, Raymond F; Franzblau, Scott; Kelly, Michelle; Stone, Robert; Li, Xing-Cong; Ferreira, Daneel; Hamann, Mark T

2010-03-26

Bioassay- and LC-MS-guided fractionation of a methanol extract from a new deep-water Alaskan sponge species of the genus Latrunculia resulted in the isolation of two new brominated pyrroloiminoquinones, dihydrodiscorhabdin B and discorhabdin Y (2), along with six known pyrroloiminoquinone alkaloids, discorhabdins A (3), C (4), E (5), and L (6), dihydrodiscorhabdin C (7), and the benzene derivative 8. Compounds 3, 4, and 7 exhibited anti-HCV activity, antimalarial activity, and selective antimicrobial activity. Although compounds 3 and 7 displayed potent and selective in vitro antiprotozoal activity, Plasmodium berghei-infected mice did not respond to these metabolites due to their toxicity in vivo.

Widespread detection of a brominated flame retardant, hexabromocyclododecane, in expanded polystyrene marine debris and microplastics from South Korea and the Asia-Pacific coastal region

International Nuclear Information System (INIS)

Jang, Mi; Shim, Won Joon; Han, Gi Myung; Rani, Manviri; Song, Young Kyoung; Hong, Sang Hee

2017-01-01

The role of marine plastic debris and microplastics as a carrier of hazardous chemicals in the marine environment is an emerging issue. This study investigated expanded polystyrene (EPS, commonly known as styrofoam) debris, which is a common marine debris item worldwide, and its additive chemical, hexabromocyclododecane (HBCD). To obtain a better understanding of chemical dispersion via EPS pollution in the marine environment, intensive monitoring of HBCD levels in EPS debris and microplastics was conducted in South Korea, where EPS is the predominant marine debris originate mainly from fishing and aquaculture buoys. At the same time, EPS debris were collected from 12 other countries in the Asia-Pacific region, and HBCD concentrations were measured. HBCD was detected extensively in EPS buoy debris and EPS microplastics stranded along the Korean coasts, which might be related to the detection of a quantity of HBCD in non-flame-retardant EPS bead (raw material). The wide detection of the flame retardant in sea-floating buoys, and the recycling of high-HBCD-containing EPS waste inside large buoys highlight the need for proper guidelines for the production and use of EPS raw materials, and the recycling of EPS waste. HBCD was also abundantly detected in EPS debris collected from the Asia-Pacific coastal region, indicating that HBCD contamination via EPS debris is a common environmental issue worldwide. Suspected tsunami debris from Alaskan beaches indicated that EPS debris has the potential for long-range transport in the ocean, accompanying the movement of hazardous chemicals. The results of this study indicate that EPS debris can be a source of HBCD in marine environments and marine food web. - Highlights: • A brominated flame retardant, HBCD, was assessed in EPS debris and microplastics. • HBCD was widely detected in EPS debris from the Asia-Pacific coastal region. • Additive HBCD are dispersed via EPS pollution in marine environments. • EPS debris can be a

50 CFR 216.191 - Designation of Offshore Biologically Important Marine Mammal Areas.

Science.gov (United States)

2010-10-01

...) Detailed information on the biology of marine mammals within the area, including estimated population size... Important Marine Mammal Areas. 216.191 Section 216.191 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS...

Drought effects on large fire activity in Canadian and Alaskan forests

International Nuclear Information System (INIS)

Xiao Jingfeng; Zhuang Qianlai

2007-01-01

Fire is the dominant disturbance in forest ecosystems across Canada and Alaska, and has important implications for forest ecosystems, terrestrial carbon dioxide emissions and the forestry industry. Large fire activity had increased in Canadian and Alaskan forests during the last four decades of the 20th century. Here we combined the Palmer Drought Severity Index and historical large fire databases to demonstrate that Canada and Alaska forest regions experienced summer drying over this time period, and drought during the fire season significantly affected forest fire activity in these regions. Climatic warming, positive geopotential height anomalies and ocean circulation patterns were spatially and temporally convolved in causing drought conditions, which in turn enhanced fuel flammability and thereby indirectly affected fire activity. Future fire regimes will likely depend on drought patterns under global climate change scenarios

A New Wave of Permafrost Warming in the Alaskan Interior?

Science.gov (United States)

Romanovsky, V. E.; Nicolsky, D.; Cable, W.; Kholodov, A. L.; Panda, S. K.

2017-12-01

The impact of climate warming on permafrost and the potential of climate feedbacks resulting from permafrost thawing have recently received a great deal of attention. Ground temperatures are a primary indicator of permafrost stability. Many of the research sites in our permafrost network are located along the North American Arctic Permafrost-Ecological Transect that spans all permafrost zones in Alaska. Most of the sites in Alaska show substantial warming of permafrost since the 1980s. The magnitude of warming has varied with location, but was typically from 0.5 to 3°C. However, this warming was not linear in time and not spatially uniform. In some regions this warming even may be reversed and a slight recent cooling of permafrost has been observed recently at some locations. The Interior of Alaska is one of such regions where a slight permafrost cooling was observed starting in the late 1990s that has continued through the 2000s and in the beginning of the 2010s. The cooling has followed the substantial increase in permafrost temperatures documented for the Interior during the 1980s and 1990s. Permafrost temperatures at 15 m depth increased here by 0.3 to 0.6°C between 1983 and 1996. In most locations they reached their maximum in the second half of the 1990s. Since then, the permafrost temperatures started to decrease slowly and by 2013 this decrease at some locations was as much as 0.3°C at 15 m depth. There are some indications that the warming trend in the Alaskan Interior permafrost resumed during the last four years. By 2016, new record highs for the entire period of measurements of permafrost temperatures at 15 m depth were recorded at several locations. The latest observed permafrost warming in the Interior was combined with higher than normal summer precipitations. This combination has triggered near-surface permafrost degradation in many locations with adverse consequences for the ground surface stability affecting ecosystems and infrastructure. In

Limits to gene flow in a cosmopolitan marine planktonic diatom.

Science.gov (United States)

Casteleyn, Griet; Leliaert, Frederik; Backeljau, Thierry; Debeer, Ann-Eline; Kotaki, Yuichi; Rhodes, Lesley; Lundholm, Nina; Sabbe, Koen; Vyverman, Wim

2010-07-20

The role of geographic isolation in marine microbial speciation is hotly debated because of the high dispersal potential and large population sizes of planktonic microorganisms and the apparent lack of strong dispersal barriers in the open sea. Here, we show that gene flow between distant populations of the globally distributed, bloom-forming diatom species Pseudo-nitzschia pungens (clade I) is limited and follows a strong isolation by distance pattern. Furthermore, phylogenetic analysis implies that under appropriate geographic and environmental circumstances, like the pronounced climatic changes in the Pleistocene, population structuring may lead to speciation and hence may play an important role in diversification of marine planktonic microorganisms. A better understanding of the factors that control population structuring is thus essential to reveal the role of allopatric speciation in marine microorganisms.

Periodontal disease and its connection to systemic biomarkers of cardiovascular disease in young American Indian/Alaskan natives.

Science.gov (United States)

Delange, Nicole; Lindsay, Suzanne; Lemus, Hector; Finlayson, Tracy L; Kelley, Scott T; Gottlieb, Roberta A

2018-02-01

Periodontal disease has been shown to be associated with cardiovascular disease (CVD). No known studies evaluate the relationship between periodontal disease status and biomarkers of CVD risk in the American Indian/Alaskan Native (AI/AN) population despite their disproportionately high rates of poor oral health and cardiovascular disease-related outcomes. This study compared levels of interleukin (IL)-6 and C-reactive protein (CRP) across increasing severity of periodontal disease status among younger adults between the ages of 21 and 43 years. Plasma levels of IL-6 and CRP were measured in adult participants (ages 21 to 43 years) as part of a study of periodontal disease and CVD risk among an AI/AN population in southern California (n = 59). Periodontal evaluations were performed and disease status was classified into three categories based on highest probing depth (none/mild: disease or active infection were excluded. Severe periodontitis was significantly associated with increased levels of IL-6 compared with those with none or mild periodontitis before controlling for other variables (P = 0.02), but lacked significance after controlling for sex, BMI, smoking status, and high-density lipoprotein (P = 0.09). Moderate periodontal disease was positively associated with IL-6 levels after controlling for potential confounders (P = 0.01). Periodontal status was not associated with CRP, before or after adjusting for covariates. In this otherwise healthy AI/AN adult sample, moderate periodontal disease compared with none or mild periodontal disease was associated with increased levels of IL-6. High levels of CRP found in this population warrant further research. © 2018 American Academy of Periodontology.

Population structure and phylogeography reveal pathways of colonization by a migratory marine reptile (Chelonia mydas) in the central and eastern Pacific.

Science.gov (United States)

Dutton, Peter H; Jensen, Michael P; Frey, Amy; LaCasella, Erin; Balazs, George H; Zárate, Patricia; Chassin-Noria, Omar; Sarti-Martinez, Adriana Laura; Velez, Elizabeth

2014-11-01

Climate, behavior, ecology, and oceanography shape patterns of biodiversity in marine faunas in the absence of obvious geographic barriers. Marine turtles are an example of highly migratory creatures with deep evolutionary lineages and complex life histories that span both terrestrial and marine environments. Previous studies have focused on the deep isolation of evolutionary lineages (>3 mya) through vicariance; however, little attention has been given to the pathways of colonization of the eastern Pacific and the processes that have shaped diversity within the most recent evolutionary time. We sequenced 770 bp of the mtDNA control region to examine the stock structure and phylogeography of 545 green turtles from eight different rookeries in the central and eastern Pacific. We found significant differentiation between the geographically separated nesting populations and identified five distinct stocks (F ST = 0.08-0.44, P eastern Pacific Chelonia mydas form a monophyletic group containing 3 subclades, with Hawaii more closely related to the eastern Pacific than western Pacific populations. The split between sampled central/eastern and western Pacific haplotypes was estimated at around 0.34 mya, suggesting that the Pacific region west of Hawaii has been a more formidable barrier to gene flow in C. mydas than the East Pacific Barrier. Our results suggest that the eastern Pacific was colonized from the western Pacific via the Central North Pacific and that the Revillagigedos Islands provided a stepping-stone for radiation of green turtles from the Hawaiian Archipelago to the eastern Pacific. Our results fit with a broader paradigm that has been described for marine biodiversity, where oceanic islands, such as Hawaii and Revillagigedo, rather than being peripheral evolutionary "graveyards", serve as sources and recipients of diversity and provide a mechanism for further radiation.

Models of marine molluscan diseases: Trends and challenges.

Science.gov (United States)

Powell, Eric N; Hofmann, Eileen E

2015-10-01

Disease effects on host population dynamics and the transmission of pathogens between hosts are two important challenges for understanding how epizootics wax and wane and how disease influences host population dynamics. For the management of marine shellfish resources, marine diseases pose additional challenges in early intervention after the appearance of disease, management of the diseased population to limit a decline in host abundance, and application of measures to restrain that decline once it occurs. Mathematical models provide one approach for quantifying these effects and addressing the competing goals of managing the diseased population versus managing the disease. The majority of models for molluscan diseases fall into three categories distinguished by these competing goals. (1) Models that consider disease effects on the host population tend to focus on pathogen proliferation within the host. Many of the well-known molluscan diseases are pandemic, in that they routinely reach high prevalence rapidly over large geographic expanses, are characterized by transmission that does not depend upon a local source, and exert a significant influence on host population dynamics. Models focused on disease proliferation examine the influence of environmental change on host population metrics and provide a basis to better manage diseased stocks. Such models are readily adapted to questions of fishery management and habitat restoration. (2) Transmission models are designed to understand the mechanisms triggering epizootics, identify factors impeding epizootic development, and evaluate controls on the rate of disease spread over the host's range. Transmission models have been used extensively to study terrestrial diseases, yet little attention has been given to their potential for understanding the epidemiology of marine molluscan diseases. For management of diseases of wild stocks, transmission models open up a range of options, including the application of area

AFSC/FMA/North Pacific Observer Foreign Fishing

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The National Marine Fisheries Service (NMFS) began placing observers on foreign fishing vessels operating off the northwest and Alaskan coasts of the United States...

Otters, Marine

Science.gov (United States)

Estes, James A.; Bodkin, James L.; Ben-David, M.; Perrin, William F.; Würsing, Bernd; Thewissen, J.G.M.

2009-01-01

The otters (Mustelidae; Lutrinae) provide an exceptional perspective into the evolution of marine living by mammals. Most extant marine mammals (e.g. the cetaceans, pinnipeds, and sirenians) have been so highly modified by long periods of selection for life in the sea that they bear little resemblance to their terrestrial ancestors. Marine otters, in contrast, are more recent expatriates from freshwater habitats and some species still live in both environments. Contrasts among species within the otters, and among the otters, terrestrial mammals, and the more highly adapted pinnipeds and cetaceans provide powerful insights into mammalian adaptations to life in the sea (Estes, 1989). Among the marine mammals, sea otters (Enhydra lutris, Fig. 1) provide the clearest understanding of consumer-induced effects on ecosystem function. This is due in part to opportunities provided by history and in part to the relative ease with which shallow coastal systems where sea otters live can be observed and studied. Although more difficult to study than sea otters, other otter species reveal the connectivity among the marine, freshwater, and terrestrial systems. These three qualities of the otters – their comparative biology, their role as predators, and their role as agents of ecosystem connectivity – are what make them interesting to marine mammalogy.The following account provides a broad overview of the comparative biology and ecology of the otters, with particular emphasis on those species or populations that live in the sea. Sea otters are features prominently, in part because they live exclusively in the sea whereas other otters have obligate associations with freshwater and terrestrial environments (Kenyon, 1969; Riedman and Estes, 1990).

Development and validation of a web-based questionnaire for surveying the health and working conditions of high-performance marine craft populations.

Science.gov (United States)

de Alwis, Manudul Pahansen; Lo Martire, Riccardo; Äng, Björn O; Garme, Karl

2016-06-20

High-performance marine craft crews are susceptible to various adverse health conditions caused by multiple interactive factors. However, there are limited epidemiological data available for assessment of working conditions at sea. Although questionnaire surveys are widely used for identifying exposures, outcomes and associated risks with high accuracy levels, until now, no validated epidemiological tool exists for surveying occupational health and performance in these populations. To develop and validate a web-based questionnaire for epidemiological assessment of occupational and individual risk exposure pertinent to the musculoskeletal health conditions and performance in high-performance marine craft populations. A questionnaire for investigating the association between work-related exposure, performance and health was initially developed by a consensus panel under four subdomains, viz. demography, lifestyle, work exposure and health and systematically validated by expert raters for content relevance and simplicity in three consecutive stages, each iteratively followed by a consensus panel revision. The item content validity index (I-CVI) was determined as the proportion of experts giving a rating of 3 or 4. The scale content validity index (S-CVI/Ave) was computed by averaging the I-CVIs for the assessment of the questionnaire as a tool. Finally, the questionnaire was pilot tested. The S-CVI/Ave increased from 0.89 to 0.96 for relevance and from 0.76 to 0.94 for simplicity, resulting in 36 items in the final questionnaire. The pilot test confirmed the feasibility of the questionnaire. The present study shows that the web-based questionnaire fulfils previously published validity acceptance criteria and is therefore considered valid and feasible for the empirical surveying of epidemiological aspects among high-performance marine craft crews and similar populations. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted

Post-breeding migration routes of marine turtles from Bonaire and Klein Bonaire, Caribbean Netherlands

NARCIS (Netherlands)

Becking, L.E.; Christianen, M.J.A.; Nava, M.I.; Miller, N.; Willis, S.; Dam, Van R.P.

2016-01-01

The management of small rookeries is key to conserving the regional genetic diversity of marine turtle populations and requires knowledge on population connectivity between breeding and foraging areas. To elucidate the geographic scope of the populations of marine turtles breeding at Bonaire and

Environmental Impact of Tributyltin-Resistant Marine Bacteria in the Indigenous Microbial Population of Tributyltin-Polluted Surface Sediments.

Science.gov (United States)

Mimura, Haruo; Yagi, Masahiro; Yoshida, Kazutoshi

2017-01-01

　We compared the TBT-resistant ability of resting cells prepared from isolates that formed colonies on nutrient agar plates containing 100 µM tributyltin (TBT) chloride, such as Photobacterium sp. TKY1, Halomonas sp. TKY2, and Photobacterium sp. NGY1, with those from taxonomically similar type strains. Photobacterium sp. TKY1 showed the highest ability among those three isolates. The number of surviving Photobacterium sp. TKY1 cells was hardly decreased after 1 h of exposure to 100 µM TBTCl, regardless of the number of resting cells in the range from 10 9.4 to 10 4.2 CFU mL -1 . In such an experimental condition, the maximum number of TBT molecules available to associate with a single cell was estimated to be approximately 6.0 x 10 11.8 . Resting cells prepared from type strains Photobacterium ganghwense JCM 12487 T and P. halotolerans LMG 22194 T , which have 16S rDNA sequences highly homologous with those of Photobacterium sp. TKY1, showed sensitivity to TBT, indicating that TBT-resistant marine bacterial species are not closely related in spite of their taxonomic similarity. We also estimated the impact of TBT-resistant bacterial species to indigenous microbial populations of TBT-polluted surface sediments. The number of surviving TBT-sensitive Vibrio natriegens ATCC 14048 T cells, 10 6.2±0.3 CFU mL -1 , was reduced to 10 4.4±0.4 CFU mL -1 when TBT-resistant Photobacterium sp. TKY1 cells, 10 9.1±0.2 CFU mL -1 , coexisted with 10 9.4±0.2 CFU mL -1 of V. natriegens ATCC 14048 T cells in the presence of 100 µM TBTCl. These results indicate that the toxicity of TBT to TBT-sensitive marine bacterial populations might be enhanced when a TBT-resistant marine bacterial species inhabits TBT-polluted surface sediments.

Influences of past climatic changes on historical population structure and demography of a cosmopolitan marine predator, the common dolphin (genus Delphinus).

Science.gov (United States)

Amaral, Ana R; Beheregaray, Luciano B; Bilgmann, Kerstin; Freitas, Luís; Robertson, Kelly M; Sequeira, Marina; Stockin, Karen A; Coelho, M M; Möller, Luciana M

2012-10-01

Climatic oscillations during the Pleistocene have greatly influenced the distribution and connectivity of many organisms, leading to extinctions but also generating biodiversity. While the effects of such changes have been extensively studied in the terrestrial environment, studies focusing on the marine realm are still scarce. Here we used sequence data from one mitochondrial and five nuclear loci to assess the potential influence of Pleistocene climatic changes on the phylogeography and demographic history of a cosmopolitan marine predator, the common dolphin (genus Delphinus). Population samples representing the three major morphotypes of Delphinus were obtained from 10 oceanic regions. Our results suggest that short-beaked common dolphins are likely to have originated in the eastern Indo-Pacific Ocean during the Pleistocene and expanded into the Atlantic Ocean through the Indian Ocean. On the other hand, long-beaked common dolphins appear to have evolved more recently and independently in several oceans. Our results also suggest that short-beaked common dolphins had recurrent demographic expansions concomitant with changes in sea surface temperature during the Pleistocene and its associated increases in resource availability, which differed between the North Atlantic and Pacific Ocean basins. By proposing how past environmental changes had an effect on the demography and speciation of a widely distributed marine mammal, we highlight the impacts that climate change may have on the distribution and abundance of marine predators and its ecological consequences for marine ecosystems. © 2012 Blackwell Publishing Ltd.

Lessons learned in managing crowdsourced data in the Alaskan Arctic.

Science.gov (United States)

Mastracci, Diana

2017-04-01

There is perhaps no place in which the consequences of global climate change can be felt more acutely than the Arctic. However, due to lack of measurements at the high latitudes, validation processes are often problematic. Citizen science projects, co-designed together with Native communities at the interface of traditional knowledge and scientific research, could play a major role in climate change adaptation strategies by advancing knowledge of the Arctic system, strengthening inter-generational bonds and facilitating improved knowledge transfer. This presentation will present lessons learned from a pilot project in the Alaskan Arctic, in which innovative approaches were used to design climate change adaptation strategies to support young subsistence hunters in taking in-situ measurements whilst out on the sea-ice. Both the socio-cultural and hardware/software challenges presented in this presentation, could provide useful guidance for future programs that aim to integrate citizens' with scientific data in Arctic communities.

Short-Term and Long-Term Biological Effects of Chronic Chemical Contamination on Natural Populations of a Marine Bivalve.

Directory of Open Access Journals (Sweden)

Marine Breitwieser

Full Text Available Understanding the effects of chronic chemical contamination on natural populations of marine organisms is complex due to the combined effects of different types of pollutants and environmental parameters that can modulate the physiological responses to stress. Here, we present the effects of a chronic contamination in a marine bivalve by combining multiple approaches that provide information on individual and population health. We sampled variegated scallops (Mimachlamys varia at sites characterized by different contaminants and contamination levels to study the short and long-term (intergenerational responses of this species to physiological stress. We used biomarkers (SOD, MDA, GST, laccase, citrate synthase and phosphatases as indicators of oxidative stress, immune system alteration, mitochondrial respiration and general metabolism, and measured population genetic diversity at each site. In parallel, concentration of 14 trace metals and 45 organic contaminants (PAHs, PCBs, pesticides in tissues were measured. Scallops were collected outside and during their reproductive season to investigate temporal variability in contaminant and biomarker levels. Our analyses revealed that the levels of two biomarkers (Laccase-type phenoloxidase and malondialdehyde were significantly correlated with Cd concentration. Additionally, we observed significant seasonal differences for four of the five biomarkers, which is likely due to the scallop reproductive status at time of sampling. As a source of concern, a location that was identified as a reference site on the basis of inorganic contaminant levels presented the same level of some persistent organic pollutants (DDT and its metabolites than more impacted sites. Finally, potential long-term effects of heavy metal contamination were observed for variegated scallops as genetic diversity was depressed in the most polluted sites.

Short-Term and Long-Term Biological Effects of Chronic Chemical Contamination on Natural Populations of a Marine Bivalve.

Science.gov (United States)

Breitwieser, Marine; Viricel, Amélia; Graber, Marianne; Murillo, Laurence; Becquet, Vanessa; Churlaud, Carine; Fruitier-Arnaudin, Ingrid; Huet, Valérie; Lacroix, Camille; Pante, Eric; Le Floch, Stéphane; Thomas-Guyon, Hélène

2016-01-01

Understanding the effects of chronic chemical contamination on natural populations of marine organisms is complex due to the combined effects of different types of pollutants and environmental parameters that can modulate the physiological responses to stress. Here, we present the effects of a chronic contamination in a marine bivalve by combining multiple approaches that provide information on individual and population health. We sampled variegated scallops (Mimachlamys varia) at sites characterized by different contaminants and contamination levels to study the short and long-term (intergenerational) responses of this species to physiological stress. We used biomarkers (SOD, MDA, GST, laccase, citrate synthase and phosphatases) as indicators of oxidative stress, immune system alteration, mitochondrial respiration and general metabolism, and measured population genetic diversity at each site. In parallel, concentration of 14 trace metals and 45 organic contaminants (PAHs, PCBs, pesticides) in tissues were measured. Scallops were collected outside and during their reproductive season to investigate temporal variability in contaminant and biomarker levels. Our analyses revealed that the levels of two biomarkers (Laccase-type phenoloxidase and malondialdehyde) were significantly correlated with Cd concentration. Additionally, we observed significant seasonal differences for four of the five biomarkers, which is likely due to the scallop reproductive status at time of sampling. As a source of concern, a location that was identified as a reference site on the basis of inorganic contaminant levels presented the same level of some persistent organic pollutants (DDT and its metabolites) than more impacted sites. Finally, potential long-term effects of heavy metal contamination were observed for variegated scallops as genetic diversity was depressed in the most polluted sites.

Assessment of fish populations and habitat on Oculina Bank, a deep-sea coral marine protected area off eastern Florida

OpenAIRE

Harter , Stacey L.; Ribera, Marta M.; Shepard, Andrew N.; Reed, John K.

2009-01-01

A portion of the Oculina Bank located off eastern Florida is a marine protected area (MPA) preserved for its dense populations of the ivory tree coral (Oculina varicosa), which provides important habitat for fish. Surveys of fish assemblages and benthic habitat were conducted inside and outside the MPA in 2003 and 2005 by using remotely operated vehicle video transects and digital still imagery. Fish species composition, biodiversity, and grouper densities were used to determine w...

Biochemical genetics in marine fisheries management and conservation

Digital Repository Service at National Institute of Oceanography (India)

Menezes, M.R.

- 403004 NBDBlDBTSponsored Training on Taxonomy, GOIdia turd Gme Bturking o/Coastal and Marine Bloresources, CIFE, Mumbal BIOCHEMICAL GENETICS IN MARINE FISHERIES MANAGEMENT AND CONSERVATION Maria R. Menezes Introduction . Species of fish, like most... population structure may have evolved and been maintained in species of fish ofeconomic interest has led to the concept of 'stock'. The stock concept dominates much of marine fisheries management, theory and practice because the identification of discrete...

Effects of barium and cadmium on the population development of the marine nematode Rhabditis (Pellioditis) marina.

Science.gov (United States)

Lira, V F; Santos, G A P; Derycke, S; Larrazabal, M E L; Fonsêca-Genevois, V G; Moens, T

2011-10-01

Offshore oil and gas drilling often involves the use of fluids containing barium and traces of other heavy metals. These may affect the environment, but information on their toxicity to benthic biota remains scant. Here, we present results of a 10-day bioassay with the marine nematode Rhabditis (Pellioditis) marina at different loads of barium (0-10 ,000 ppm nominal concentrations) and cadmium (0-12 ppm) in the range of concentrations reported from drilling-impacted sediments. Barium did not affect the fitness and population development of R. (P.) marina at concentrations up to 300 ppm, but did cause a decrease in population abundance and an increase in development time from concentrations of 400-2000 ppm onwards. Increased mortality occurred at 4800 ppm Ba. For cadmium, LOEC and EC₅₀ values for total population abundance were 2.95 and 8.82 ppm, respectively. Cd concentrations as low as 2.40 to 2.68 caused a decrease in the abundance of adult nematodes, indicating that assays covering more generations would likely demonstrate yet more pronounced population-level effects. Our results indicate that oil and gas drilling activities may potentially have important implications for the meiobenthos through the toxicity of barium and associated metals like cadmium. Copyright © 2011 Elsevier Ltd. All rights reserved.

A Guide to Alaskan Black Spruce Wetland Bryophytes: Species Specific to Delineation for Interior and South Central Regions

Science.gov (United States)

2008-06-01

treatment for North American taxa is that for the new Flora of North America bryophyte volumes, by McQueen and Andrus (2007). In Alaska, a...Note: Nomenclature used in this document follows that in current use in the Flora of North America : Mosses and the TROPICOS Moss nomenclatural...in Moss Flora of North America ) includes 20 species with two varieties in the Alaskan flora. Of these, 14 are described as occurring occasionally

Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears.

Science.gov (United States)

Cahill, James A; Stirling, Ian; Kistler, Logan; Salamzade, Rauf; Ersmark, Erik; Fulton, Tara L; Stiller, Mathias; Green, Richard E; Shapiro, Beth

2015-03-01

Polar bears are an arctic, marine adapted species that is closely related to brown bears. Genome analyses have shown that polar bears are distinct and genetically homogeneous in comparison to brown bears. However, these analyses have also revealed a remarkable episode of polar bear gene flow into the population of brown bears that colonized the Admiralty, Baranof and Chichagof islands (ABC islands) of Alaska. Here, we present an analysis of data from a large panel of polar bear and brown bear genomes that includes brown bears from the ABC islands, the Alaskan mainland and Europe. Our results provide clear evidence that gene flow between the two species had a geographically wide impact, with polar bear DNA found within the genomes of brown bears living both on the ABC islands and in the Alaskan mainland. Intriguingly, while brown bear genomes contain up to 8.8% polar bear ancestry, polar bear genomes appear to be devoid of brown bear ancestry, suggesting the presence of a barrier to gene flow in that direction. © 2014 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

Using smooth sheets to describe groundfish habitat in Alaskan waters, with specific application to two flatfishes

Science.gov (United States)

Zimmermann, Mark; Reid, Jane A.; Golden, Nadine

2016-01-01

In this analysis we demonstrate how preferred fish habitat can be predicted and mapped for juveniles of two Alaskan groundfish species – Pacific halibut (Hippoglossus stenolepis) and flathead sole (Hippoglossoides elassodon) – at five sites (Kiliuda Bay, Izhut Bay, Port Dick, Aialik Bay, and the Barren Islands) in the central Gulf of Alaska. The method involves using geographic information system (GIS) software to extract appropriate information from National Ocean Service (NOS) smooth sheets that are available from NGDC (the National Geophysical Data Center). These smooth sheets are highly detailed charts that include more soundings, substrates, shoreline and feature information than the more commonly-known navigational charts. By bringing the information from smooth sheets into a GIS, a variety of surfaces, such as depth, slope, rugosity and mean grain size were interpolated into raster surfaces. Other measurements such as site openness, shoreline length, proportion of bay that is near shore, areas of rocky reefs and kelp beds, water volumes, surface areas and vertical cross-sections were also made in order to quantify differences between the study sites. Proper GIS processing also allows linking the smooth sheets to other data sets, such as orthographic satellite photographs, topographic maps and precipitation estimates from which watersheds and runoff can be derived. This same methodology can be applied to larger areas, taking advantage of these free data sets to describe predicted groundfish essential fish habitat (EFH) in Alaskan waters.

Quantifying Fire Impact on Alaskan Tundra from Satellite Observations and Field Measurements

Science.gov (United States)

Loboda, T. V.; Chen, D.; He, J.; Jenkins, L. K.

2017-12-01

Wildfire is a major disturbance agent in Alaskan tundra. The frequency and extent of fire events obtained from paleo, management, and satellite records may yet underestimate the scope of tundra fire impact. Field measurements, collected within the NASA's ABoVE campaign, revealed unexpectedly shallow organic soils ( 15 cm) across all sampled sites of the Noatak valley with no significant difference between recently burned and unburned sites. In typical small and medium-sized tundra burns vegetation recovers rapidly and scars are not discernable in 30 m optical satellite imagery by the end of the first post-fire season. However, field observations indicate that vegetation and subsurface characteristics within fire scars of different ages vary across the landscape. In this study we develop linkages between fire-induced changes to tundra and satellite-based observations from optical, thermal, and microwave imagers to enable extrapolation of in-situ observations to cover the full extent of Alaskan tundra. Our results show that recent ( 30 years) fire history can be reconstructed from optical observations (R2 0.65, pfire history can be determined for 4 years post fire primarily due to increased soil moisture at burned sites. Field measurements suggest that the relatively quick SAR signal dissipation results from more even distribution of surface moisture through the soil column with increases in Active Layer Thickness (ALT). Similar to previous long-term field studies we find an increase in shrub fraction and shrub height within burns over time at the landscape scale; however, the strength and significance of the relationship between shrub fraction and time since fire is governed by burn severity with more severe burns predictably (p post-fire shrub cover. Although reasonably well-correlated to each other when adjusted for topography (R2 0.35, p < 0.001), neither ALT nor soil temperature can be directly linked to optical or thermal brightness observations with acceptable

Increased disease calls for a cost-benefits review of marine reserves.

Directory of Open Access Journals (Sweden)

Emma C Wootton

Full Text Available Marine reserves (or No-Take Zones are implemented to protect species and habitats, with the aim of restoring a balanced ecosystem. Although the benefits of marine reserves are commonly monitored, there is a lack of insight into the potential detriments of such highly protected waters. High population densities attained within reserves may induce negative impacts such as unfavourable trophic cascades and disease outbreaks. Hence, we investigated the health of lobster populations in the UK's Marine Conservation Zone (MCZ at Lundy Island. Comparisons were made between the fished, Refuge Zone (RZ and the un-fished, No-Take Zone (NTZ; marine reserve. We show ostensibly positive effects such as increased lobster abundance and size within the NTZ; however, we also demonstrate apparent negative effects such as increased injury and shell disease. Our findings suggest that robust cost-benefit analyses of marine reserves could improve marine reserve efficacy and subsequent management strategies.

Genetic population structure of turbot ( Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea

DEFF Research Database (Denmark)

Eg Nielsen, Einar; Nielsen, P.H.; Meldrup, Dorte

2004-01-01

Sea, suggesting high gene flow among populations in these areas. In contrast, there was a sharp cline in genetic differentiation going from the low saline Baltic Sea to the high saline North Sea. The data were explained best by two divergent populations connected by a hybrid zone; however......, a mechanical mixing model could not be ruled out. A significant part of the genetic variance could be ascribed to variation among years within locality. Nevertheless, the population structure was relatively stable over time, suggesting that the observed pattern of genetic differentiation is biologically...... significant. This study suggests that hybrid zones are a common phenomenon for marine fishes in the transition area between the North Sea and the Baltic Sea and highlights the importance of using interspecific comparisons for inferring population structure in high gene flow species such as most marine fishes....

Alaskan Superintendent Turnover: Is There a Correlation between Anticipated Turnover and the Organizational Culture of School Boards in the State of Alaska

Science.gov (United States)

Herbert, David M. Q.

2012-01-01

The purpose of this study is to determine if a particular type of school board culture is predictive of Alaskan public school superintendents' intention to leave their positions. Cameron and Quinn's four types of organizational culture--hierarchy, market, clan, and adhocracy--serve as the model for the study, which surveyed Alaska's public school…

Coastal marine contamination in Colombia

International Nuclear Information System (INIS)

Garay T, Jesus A; Marin Z, Bienvenido; Velez G, Ana Maria

2002-01-01

The paper tries about the problem of the marine contamination and their marked influence in the health of the coastal ecosystems, of their narrow relationship with the growing increase of the populations that they inhabit the coastal areas and of equal it forms, with the increment of the domestic, agricultural and industrial activities that, for the wrong handling and inadequate control of the solid and liquid waste, they affect the marine environment with significant implications at ecological, socioeconomic level and of health. Another component of the environmental problem of the marine ecosystems in the country, resides in that don't exist in general normative on the chemical quality and sanitary for its marine waters, that which limits the categorization of this agreement ecosystems with its environmental quality, conditioning this the lack of adequate mechanisms to mitigate the causes that originate the deterioration of the quality of the Colombian coasts

Relative sea level and coastal environments in arctic Alaska during Marine Isotope Stage 5

Science.gov (United States)

Farquharson, L. M.; Mann, D. H.; Jones, B. M.; Rittenour, T. M.; Grosse, G.; Groves, P.

2015-12-01

Marine Isotope Stage (MIS) 5 was characterized by marked fluctuations in climate, the warmest being MIS 5e (124-119 ka) when relative sea level (RSL) stood 2-10 m higher than today along many coastlines. In northern Alaska, marine deposits now 5-10 m above modern sea level are assigned to this time period and termed the Pelukian transgression (PT). Complicating this interpretation is the possibility that an intra-Stage 5 ice shelf extended along the Alaskan coast, causing isostatic depression along its grounded margins, which caused RSL highs even during periods of low, global RSL. Here we use optically stimulated luminescence (OSL) to date inferred PT deposits on the Beaufort Sea coastal plain. A transition from what we interpret to be lagoonal mud to sandy tidal flat deposits lying ~ 2.75 m asl dates to 113+/-18 ka. Above this, a 5-m thick gravelly barrier beach dates to 95 +/- 20 ka. This beach contains well-preserved marine molluscs, whale vertebrae, and walrus tusks. Pleistocene-aged ice-rich eolian silt (yedoma) blanket the marine deposits and date to 57.6 +/-10.9 ka. Our interpretation of this chronostratigraphy is that RSL was several meters higher than today during MIS 5e, and lagoons or brackish lakes were prevalent. Gravel barrier beaches moved onshore as local RSL rose further after MIS 5e. The error range of the OSL age of the barrier-beach unit spans the remaining four substages of MIS 5; however, the highstand of RSL on this arctic coastline appears to occurr after the warmest part of the last interglacial and appears not to be coeval with the eustatic maximum reached at lower latitudes during MIS 5. One possibility is that RSL along the Beaufort Sea coast was affected by isostatic depression caused by an ice shelf associated with widespread, intra-Stage 5 glaciation that was out of phase with lower latitude glaciation and whose extent and timing remains enigmatic.

Predicting the effects of copper on local population decline of 2 marine organisms, cobia fish and whiteleg shrimp, based on avoidance response.

Science.gov (United States)

Araújo, Cristiano V M; Cedeño-Macías, Luís A; Vera-Vera, Victoria C; Salvatierra, David; Rodríguez, Elizabeth N V; Zambrano, Ufredo; Kuri, Samir

2016-02-01

The present study focuses on avoidance response to predict population decline of the marine fish Rachycentron canadum (cobia) and larvae of the estuarine shrimp Litopenaeus vannamei (whiteleg shrimp). Avoidance of approximately 60% was recorded for the cobia fry exposed to 1.0 mg Cu/L, 1.60 mg Cu/L, and 1.80 mg Cu/L. For the shrimp larvae, avoidance was approximately 80% for all Cu concentrations. The population decline of cobia fry was conditioned by avoidance in lower concentrations. However, in higher concentrations mortality begins to play an important role. The displacement toward uncontaminated habitats might determine shrimp population decline. A Cu-contaminated environment can determine the habitat selection of both species and, therefore, their local population decline. © 2015 SETAC.

Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution.

Science.gov (United States)

Cahill, James A; Green, Richard E; Fulton, Tara L; Stiller, Mathias; Jay, Flora; Ovsyanikov, Nikita; Salamzade, Rauf; St John, John; Stirling, Ian; Slatkin, Montgomery; Shapiro, Beth

2013-01-01

Despite extensive genetic analysis, the evolutionary relationship between polar bears (Ursus maritimus) and brown bears (U. arctos) remains unclear. The two most recent comprehensive reports indicate a recent divergence with little subsequent admixture or a much more ancient divergence followed by extensive admixture. At the center of this controversy are the Alaskan ABC Islands brown bears that show evidence of shared ancestry with polar bears. We present an analysis of genome-wide sequence data for seven polar bears, one ABC Islands brown bear, one mainland Alaskan brown bear, and a black bear (U. americanus), plus recently published datasets from other bears. Surprisingly, we find clear evidence for gene flow from polar bears into ABC Islands brown bears but no evidence of gene flow from brown bears into polar bears. Importantly, while polar bears contributed bear, they contributed 6.5% of the X chromosome. The magnitude of sex-biased polar bear ancestry and the clear direction of gene flow suggest a model wherein the enigmatic ABC Island brown bears are the descendants of a polar bear population that was gradually converted into brown bears via male-dominated brown bear admixture. We present a model that reconciles heretofore conflicting genetic observations. We posit that the enigmatic ABC Islands brown bears derive from a population of polar bears likely stranded by the receding ice at the end of the last glacial period. Since then, male brown bear migration onto the island has gradually converted these bears into an admixed population whose phenotype and genotype are principally brown bear, except at mtDNA and X-linked loci. This process of genome erosion and conversion may be a common outcome when climate change or other forces cause a population to become isolated and then overrun by species with which it can hybridize.

Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution.

Directory of Open Access Journals (Sweden)

James A Cahill

Full Text Available Despite extensive genetic analysis, the evolutionary relationship between polar bears (Ursus maritimus and brown bears (U. arctos remains unclear. The two most recent comprehensive reports indicate a recent divergence with little subsequent admixture or a much more ancient divergence followed by extensive admixture. At the center of this controversy are the Alaskan ABC Islands brown bears that show evidence of shared ancestry with polar bears. We present an analysis of genome-wide sequence data for seven polar bears, one ABC Islands brown bear, one mainland Alaskan brown bear, and a black bear (U. americanus, plus recently published datasets from other bears. Surprisingly, we find clear evidence for gene flow from polar bears into ABC Islands brown bears but no evidence of gene flow from brown bears into polar bears. Importantly, while polar bears contributed <1% of the autosomal genome of the ABC Islands brown bear, they contributed 6.5% of the X chromosome. The magnitude of sex-biased polar bear ancestry and the clear direction of gene flow suggest a model wherein the enigmatic ABC Island brown bears are the descendants of a polar bear population that was gradually converted into brown bears via male-dominated brown bear admixture. We present a model that reconciles heretofore conflicting genetic observations. We posit that the enigmatic ABC Islands brown bears derive from a population of polar bears likely stranded by the receding ice at the end of the last glacial period. Since then, male brown bear migration onto the island has gradually converted these bears into an admixed population whose phenotype and genotype are principally brown bear, except at mtDNA and X-linked loci. This process of genome erosion and conversion may be a common outcome when climate change or other forces cause a population to become isolated and then overrun by species with which it can hybridize.

Willingness to Pay for Marine Turtle Conservation in Asia: A Cross-Country Perspective

OpenAIRE

Jin Jiangjun; Rodelio Subade; Orapan Nabangchang; Truong Dang Thuy; Anabeth L. Indab

2009-01-01

Marine turtles are important, not only for their economic and intrinsic value, but because an adequate population of marine turtles is often an indicator of healthy marine ecosystem. Of the seven species of marine turtles, four are critically endangered, while two are in the next-highest risk category.

Marine Litter, Eutrophication and Noise Assessment Tools

Science.gov (United States)

Palazov, Atanas; Velcheva, Maya; Milkova, Tanya; Slabakova, Violeta; Marinova, Veselka

2017-04-01

MARLEN - Marine Litter, Eutrophication and Noise Assessment Tools is a project under the Programme BG02.03: Increased capacity for assessing and predicting environmental status in marine and inland waters, managed by Bulgarian Ministry of environment and waters and co-financed by the Financial Mechanism of the European Economic Area (EEA FM) 2009 - 2014. Project Beneficiary is the Institute of oceanology - Bulgarian Academy of Sciences with two partners: Burgas municipality and Bulgarian Black Sea Basin Directorate. Initial assessment of ecological state of Bulgarian marine waters showed lack of data for some descriptors of MSFD. The main goal of MARLEN is to build up tools for assessment of marine environment by implementing new technologies and best practices for addressing three main areas of interest with lack of marine data in particular: a) Marine litter detection and classification in coastal areas; b) Regular near real time surface water eutrophication monitoring on large aquatory; c) Underwater noise monitoring. Developed tools are an important source of real time, near real time and delay mode marine data for Bulgarian Black Sea waters. The partnership within the project increased capacity for environmental assessments and training of personnel and enhances collaboration between scientific institutes, regional and local authorities. Project results supported implementation of MSFD in Bulgarian marine waters for the benefit of coastal population, marine industry, tourism, marine research and marine spatial planning.

Towards Marine Spatial Planning in Southern Taiwan

Directory of Open Access Journals (Sweden)

Meng-Tsung Lee

2014-11-01

Full Text Available Due to population growth, rapid economic development and inadequate marine control, the use of ocean and coastal regions in Taiwan has become more frequent and intense in recent years. However, the lack of comprehensive marine and coastal planning in this island nation has led to many conflicts over space and resources and limited its ability to prepare for and respond to environmental hazards, thus threatening national security as well as the safety and property of its citizens. This study proposes a marine zoning scheme for southern Taiwan. The results show that many important habitats in the southern sea areas have not been properly protected due to the extremely small size of the marine protected area. Furthermore, the majority of the conflicts derive from the exclusive fishing right vs. other uses such as marine conservation. Therefore, it is crucial to establish the marine spatial planning (MSP for the Southern Taiwan to deal with the conflicts of use seas and uncertainties associated with complex, heterogeneous, and dynamic marine system.

Radioisotopes leakage of Fukushima may hit marine life

International Nuclear Information System (INIS)

Wu Qing; Liu Qiang

2012-01-01

So many radioisotopes were released into the Pacific Ocean after the Fukushima Daiichi nuclear disaster in Japan. Although the isotopes will be vastly diluted and the contamination is unlikely to cause immediate harm to marine organisms, but long-lived isotopes are expected to accumulate in the food chain and may cause problems such as increased mortality in fish and marine-mammal populations. Viewpoints and recommendations for radioactivity pollution survey to the marine ecosystem by experts were reviewed in this paper. (authors)

Chemically dispersed oil is cytotoxic and genotoxic to sperm whale skin cells.

Science.gov (United States)

Wise, Catherine F; Wise, James T F; Wise, Sandra S; Wise, John Pierce

2018-06-01

Two major oil crises in United States history, the 1989 Exxon-Valdez oil spill in Alaska and the 2010 Deepwater Horizon Oil Rig explosion in the Gulf of Mexico, drew attention to the need for toxicological experiments on oil and chemically dispersed oil. We are still learning the effects these spills had on wildlife. However, little data is known about the toxicity of these substances in marine mammals. The objective of this study is to determine the toxicity of Alaskan oil, as well as chemically dispersed oil. Oil experiments were performed using the water accommodated fraction of Alaskan oil (WAF) and the chemically enhanced water accommodated fraction of Alaskan oil (CEWAF). The Alaskan WAF is not cytotoxic to sperm whale skin cells though it did induce chromosome damage; S9-mediated metabolism did not affect the cytotoxicity of WAF but did increase the levels of chromosome damage. Alaskan CEWAF is more cytotoxic and genotoxic than the WAF; S9 mediated metabolism increased both cytotoxicity and genotoxicity of CEWAF. Analysis of the PAH content of Alaskan WAF and CEWAF revealed a forty-fold increase in the total levels of PAHs in CEWAF compared to WAF. These findings show that chemically dispersed oil leads to higher levels of PAH exposure which are more toxic and likely to lead to longer and more persistent health effects. Copyright © 2017 Elsevier Inc. All rights reserved.

Freshwater savings from marine protein consumption

International Nuclear Information System (INIS)

Gephart, Jessica A; Pace, Michael L; D’Odorico, Paolo

2014-01-01

Marine fisheries provide an essential source of protein for many people around the world. Unlike alternative terrestrial sources of protein, marine fish production requires little to no freshwater inputs. Consuming marine fish protein instead of terrestrial protein therefore represents freshwater savings (equivalent to an avoided water cost) and contributes to a low water footprint diet. These water savings are realized by the producers of alternative protein sources, rather than the consumers of marine protein. This study quantifies freshwater savings from marine fish consumption around the world by estimating the water footprint of replacing marine fish with terrestrial protein based on current consumption patterns. An estimated 7 600 km 3  yr −1 of water is used for human food production. Replacing marine protein with terrestrial protein would require an additional 350 km 3  yr −1 of water, meaning that marine protein provides current water savings of 4.6%. The importance of these freshwater savings is highly uneven around the globe, with savings ranging from as little as 0 to as much as 50%. The largest savings as a per cent of current water footprints occur in Asia, Oceania, and several coastal African nations. The greatest national water savings from marine fish protein occur in Southeast Asia and the United States. As the human population increases, future water savings from marine fish consumption will be increasingly important to food and water security and depend on sustainable harvest of capture fisheries and low water footprint growth of marine aquaculture. (paper)

Does terrestrial epidemiology apply to marine systems?

Science.gov (United States)

McCallum, Hamish I.; Kuris, Armand M.; Harvell, C. Drew; Lafferty, Kevin D.; Smith, Garriet W.; Porter, James

2004-01-01

Most of epidemiological theory has been developed for terrestrial systems, but the significance of disease in the ocean is now being recognized. However, the extent to which terrestrial epidemiology can be directly transferred to marine systems is uncertain. Many broad types of disease-causing organism occur both on land and in the sea, and it is clear that some emergent disease problems in marine environments are caused by pathogens moving from terrestrial to marine systems. However, marine systems are qualitatively different from terrestrial environments, and these differences affect the application of modelling and management approaches that have been developed for terrestrial systems. Phyla and body plans are more diverse in marine environments and marine organisms have different life histories and probably different disease transmission modes than many of their terrestrial counterparts. Marine populations are typically more open than terrestrial ones, with the potential for long-distance dispersal of larvae. Potentially, this might enable unusually rapid propagation of epidemics in marine systems, and there are several examples of this. Taken together, these differences will require the development of new approaches to modelling and control of infectious disease in the ocean.

Lessons learned from practical approaches to reconcile mismatches between biological population structure and stock units of marine fish

DEFF Research Database (Denmark)

Kerr, Lisa A.; Hintzen, Niels T.; Cadrin, Steven X.

2017-01-01

for overexploitation of unique spawning components, which can lead to loss of productivity and reduced biodiversity along with destabilization of local and regional stock dynamics. Furthermore, ignoring complex population structure and stock connectivity can lead to misperception of the magnitude of fish productivity......, which can translate to suboptimal utilization of the resource. We describe approaches that are currently being applied to improve the assessment and management process for marine fish in situations where complex spatial structure has led to an observed mismatch between the scale of biological...... and resilience of fish species....

The footprint of Alaskan tundra fires during the past half-century: implications for surface properties and radiative forcing

International Nuclear Information System (INIS)

Rocha, Adrian V; Loranty, Michael M; Higuera, Phil E; Mack, Michelle C; Hu Fengsheng; Jones, Benjamin M; Breen, Amy L; Rastetter, Edward B; Shaver, Gus R; Goetz, Scott J

2012-01-01

Recent large and frequent fires above the Alaskan arctic circle have forced a reassessment of the ecological and climatological importance of fire in arctic tundra ecosystems. Here we provide a general overview of the occurrence, distribution, and ecological and climate implications of Alaskan tundra fires over the past half-century using spatially explicit climate, fire, vegetation and remote sensing datasets for Alaska. Our analyses highlight the importance of vegetation biomass and environmental conditions in regulating tundra burning, and demonstrate that most tundra ecosystems are susceptible to burn, providing the environmental conditions are right. Over the past two decades, fire perimeters above the arctic circle have increased in size and importance, especially on the North Slope, indicating that future wildfire projections should account for fire regime changes in these regions. Remote sensing data and a literature review of thaw depths indicate that tundra fires have both positive and negative implications for climatic feedbacks including a decadal increase in albedo radiative forcing immediately after a fire, a stimulation of surface greenness and a persistent long-term (>10 year) increase in thaw depth. In order to address the future impact of tundra fires on climate, a better understanding of the control of tundra fire occurrence as well as the long-term impacts on ecosystem carbon cycling will be required. (letter)

SUBSTRATE UPTAKE AND UTILIZATION BY A MARINE ULTRAMICROBACTERIUM

NARCIS (Netherlands)

SCHUT, F; JANSEN, M; GOMES, TMP; GOTTSCHAL, JC; HARDER, W; PRINS, RA

A facultatively oligotrophic ultramicrobacterium (strain RB2256) isolated from an Alaskan fjord by extinction dilution in seawater, was grown in batch culture and under single- and dual-substrate-limitation of alanine and glucose in a chemostat. The nature of the uptake systems, and the uptake

Population structure and adaptation in fishes

DEFF Research Database (Denmark)

Limborg, Morten

Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra-specific......Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra......-specific population structure and adaptive divergence. The large population sizes and high migration rates common to most marine fishes impede the differentiating effect of genetic drift, having led to expectations of no population structure and that the occurrence of local adaptation should be rare in these species....... Comprehensive genetic analyses on the small pelagic fish European sprat (Sprattus sprattus) revealed significant population structure throughout its distribution with an overall pattern of reduced connectivity across environmental transition zones. Population structure reflected both historical separations over...

Marine-derived nutrients, bioturbation, and ecosystem metabolism: reconsidering the role of salmon in streams.

Science.gov (United States)

Holtgrieve, Gordon W; Schindler, Daniel E

2011-02-01

In coastal areas of the North Pacific Ocean, annual returns of spawning salmon provide a substantial influx of nutrients and organic matter to streams and are generally believed to enhance the productivity of recipient ecosystems. Loss of this subsidy from areas with diminished salmon runs has been hypothesized to limit ecosystem productivity in juvenile salmon rearing habitats (lakes and streams), thereby reinforcing population declines. Using five to seven years of data from an Alaskan stream supporting moderate salmon densities, we show that salmon predictably increased stream water nutrient concentrations, which were on average 190% (nitrogen) and 390% (phosphorus) pre-salmon values, and that primary producers incorporated some of these nutrients into tissues. However, benthic algal biomass declined by an order of magnitude despite increased nutrients. We also measured changes in stream ecosystem metabolic properties, including gross primary productivity (GPP) and ecosystem respiration (ER), from three salmon streams by analyzing diel measurements of oxygen concentrations and stable isotopic ratios (delta O-O2) within a Bayesian statistical model of oxygen dynamics. Our results do not support a shift toward higher primary productivity with the return of salmon, as is expected from a nutrient fertilization mechanism. Rather, net ecosystem metabolism switched from approximately net autotrophic (GPP > or = ER) to a strongly net heterotrophic state (GPP disturbance enhanced in situ heterotrophic respiration. Salmon also changed the physical properties of the stream, increasing air-water gas exchange by nearly 10-fold during peak spawning. We suggest that management efforts to restore salmon ecosystems should consider effects on ecosystem metabolic properties and how salmon disturbance affects the incorporation of marine-derived nutrients into food webs.

Bioaccumulation of petroleum hydrocarbons in arctic amphipods in the oil development area of the Alaskan Beaufort Sea.

Science.gov (United States)

Neff, Jerry M; Durell, Gregory S

2012-04-01

An objective of a multiyear monitoring program, sponsored by the US Department of the Interior, Bureau of Ocean Energy Management was to examine temporal and spatial changes in chemical and biological characteristics of the Arctic marine environment resulting from offshore oil exploration and development activities in the development area of the Alaskan Beaufort Sea. To determine if petroleum hydrocarbons from offshore oil operations are entering the Beaufort Sea food web, we measured concentrations of hydrocarbons in tissues of amphipods, Anonyx nugax, sediments, Northstar crude oil, and coastal peat, collected between 1999 and 2006 throughout the development area. Mean concentrations of polycyclic aromatic hydrocarbons (PAH), saturated hydrocarbons (SHC), and sterane and triterpane petroleum biomarkers (StTr) were not significantly different in amphipods near the Northstar oil production facility, before and after it came on line in 2001, and in amphipods from elsewhere in the study area. Forensic analysis of the profiles (relative composition and concentrations) of the 3 hydrocarbon classes revealed that hydrocarbon compositions were different in amphipods, surface sediments where the amphipods were collected, Northstar crude oil, and peat from the deltas of 4 North Slope rivers. Amphipods and sediments contained a mixture of petrogenic, pyrogenic, and biogenic PAH. The SHC in amphipods were dominated by pristane derived from zooplankton, indicating that the SHC were primarily from the amphipod diet of zooplankton detritus. The petroleum biomarker StTr profiles did not resemble those in Northstar crude oil. The forensic analysis revealed that hydrocarbons in amphipod tissues were not from oil production at Northstar. Hydrocarbons in amphipod tissues were primarily from their diet and from river runoff and coastal erosion of natural diagenic and fossil terrestrial materials, including seep oils, kerogens, and peat. Offshore oil and gas exploration and development

Validation of an Eulerian population model for the marine copepod Calanus finmarchicus in the Norwegian Sea

Science.gov (United States)

Alver, Morten Omholt; Broch, Ole Jacob; Melle, Webjørn; Bagøien, Espen; Slagstad, Dag

2016-08-01

Calanus finmarchicus is an important zooplankton species in the Norwegian Sea, as a dominant food organism for pelagic fish larvae, and a potentially large source of marine lipids and proteins. Its position in the marine food web also makes it an important model species in assessing the risk posed by oil spills in the Norwegian and Arctic Seas. In this study, an Eulerian population model for C.finmarchicus, coupled to the physical and ecological model SINMOD, is presented. The model includes the full life cycle of C. finmarchicus with a representation of all developmental stages. The model has been validated against field measurements made in different areas of the Norwegian Sea in 1997 and 1998. The model displays geographical and temporal distributions of development stages that is in line with observed patterns. When comparing time series for selected regions, we see a high degree of variability both in the field samples and model output. On average, the model deviations are near half of the summed variability of the field data and model estimates. The model has applications within assessment of ecological production, and the potential for harvesting in the Norwegian and Arctic Seas, but in combination with other models, also for the assessment of ecological effects of oil spills and other types of pollution.

Marine invasions by non-sea snakes, with thoughts on terrestrial-aquatic-marine transitions.

Science.gov (United States)

Murphy, John C

2012-08-01

Few species of snakes show extensive adaptations to aquatic environments and even fewer exploit the oceans. A survey of morphology, lifestyles, and habitats of 2552 alethenophidian snakes revealed 362 (14%) that use aquatic environments, are semi-aquatic, or aquatic; about 70 (2.7%) of these are sea snakes (Hydrophiinae and Laticaudinae). The ancient and aquatic family Acrochordidae contains three extant species, all of which have populations inhabiting brackish or marine environments, as well as freshwater. The Homalopsidae have the most ecologically diverse representatives in coastal habitats. Other families containing species exploiting saline waters with populations in freshwater environments include: the Dipsadidae of the western hemisphere, the cosmopolitan Natricidae, the African Grayinae, and probably a few Colubridae. Species with aquatic and semi-aquatic lifestyles are compared with more terrestrial (fossorial, cryptozoic, and arboreal) species for morphological traits and life histories that are convergent with those found in sea snakes; this may provide clues to the evolution of marine snakes and increase our understanding of snake diversity.

Global Priorities for Marine Biodiversity Conservation

Science.gov (United States)

Selig, Elizabeth R.; Turner, Will R.; Troëng, Sebastian; Wallace, Bryan P.; Halpern, Benjamin S.; Kaschner, Kristin; Lascelles, Ben G.; Carpenter, Kent E.; Mittermeier, Russell A.

2014-01-01

In recent decades, many marine populations have experienced major declines in abundance, but we still know little about where management interventions may help protect the highest levels of marine biodiversity. We used modeled spatial distribution data for nearly 12,500 species to quantify global patterns of species richness and two measures of endemism. By combining these data with spatial information on cumulative human impacts, we identified priority areas where marine biodiversity is most and least impacted by human activities, both within Exclusive Economic Zones (EEZs) and Areas Beyond National Jurisdiction (ABNJ). Our analyses highlighted places that are both accepted priorities for marine conservation like the Coral Triangle, as well as less well-known locations in the southwest Indian Ocean, western Pacific Ocean, Arctic and Antarctic Oceans, and within semi-enclosed seas like the Mediterranean and Baltic Seas. Within highly impacted priority areas, climate and fishing were the biggest stressors. Although new priorities may arise as we continue to improve marine species range datasets, results from this work are an essential first step in guiding limited resources to regions where investment could best sustain marine biodiversity. PMID:24416151

Global priorities for marine biodiversity conservation.

Directory of Open Access Journals (Sweden)

Elizabeth R Selig

Full Text Available In recent decades, many marine populations have experienced major declines in abundance, but we still know little about where management interventions may help protect the highest levels of marine biodiversity. We used modeled spatial distribution data for nearly 12,500 species to quantify global patterns of species richness and two measures of endemism. By combining these data with spatial information on cumulative human impacts, we identified priority areas where marine biodiversity is most and least impacted by human activities, both within Exclusive Economic Zones (EEZs and Areas Beyond National Jurisdiction (ABNJ. Our analyses highlighted places that are both accepted priorities for marine conservation like the Coral Triangle, as well as less well-known locations in the southwest Indian Ocean, western Pacific Ocean, Arctic and Antarctic Oceans, and within semi-enclosed seas like the Mediterranean and Baltic Seas. Within highly impacted priority areas, climate and fishing were the biggest stressors. Although new priorities may arise as we continue to improve marine species range datasets, results from this work are an essential first step in guiding limited resources to regions where investment could best sustain marine biodiversity.

Critical factors for the recovery of marine mammals.

Science.gov (United States)

Lotze, Heike K; Flemming, Joanna Mills; Magera, Anna M

2017-12-01

{en} Over the past decades, much research has focused on understanding the critical factors for marine extinctions with the aim of preventing further species losses in the oceans. Although conservation and management strategies are enabling several species and populations to recover, others remain at low abundance levels or continue to decline. To understand these discrepancies, we used a published database on abundance trends of 137 populations of marine mammals worldwide and compiled data on 28 potentially critical factors for recovery. We then applied random forests and additive mixed models to determine which intrinsic and extrinsic factors are critical for the recovery of marine mammals. A mix of life-history characteristics, ecological traits, phylogenetic relatedness, population size, geographic range, human impacts, and management efforts explained why populations recovered or not. Consistently, species with lower age at maturity and intermediate habitat area were more likely to recover, which is consistent with life-history and ecological theory. Body size, trophic level, social interactions, dominant habitat, ocean basin, and habitat disturbance also explained some differences in recovery patterns. Overall, a variety of intrinsic and extrinsic factors were important for species' recovery, pointing to cumulative effects. Our results provide insight for improving conservation and management strategies to enhance recoveries in the future. © 2017 Society for Conservation Biology.

Secondary production in shallow marine environments

International Nuclear Information System (INIS)

Pomeroy, L.R.

1976-01-01

Recommendations are discussed with regard to population ecology, microbial food webs, marine ecosystems, improved instrumentation, and effects of land and sea on shallow marine systems. The control of secondary production is discussed with regard to present status of knowledge; research needs for studies on dominant secondary producers, food webs that lead to commercial species, and significant features of the trophic structure of shallow water marine communities. Secondary production at the land-water interface is discussed with regard to present status of knowledge; importance of macrophytes to secondary production; export to secondary consumers; utilization of macrophyte primary production; and correlations between secondary production and river discharge. The role of microorganisms in secondary production is also discussed

PIR Marine Turtle Ocean Captures & Observations

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Effective management of marine turtle data is essential to maximize their research value and enable timely population assessments and recovery monitoring. To provide...

Case Study on Ancestry Estimation in an Alaskan Native Family: Identity and Safeguards Against Reductionism.

Science.gov (United States)

Bader, Alyssa C; Malhi, Ripan S

2015-10-01

Understanding the complexities of ancestry-related identity is a necessary component of ethically sound research related to the genetic ancestry of modern-day communities. This is especially true when working with indigenous populations, given the legal and social implications that genetic ancestry interpretations may have in these communities. This study employs a multicomponent approach to explore the intricacies of ancestry-related identity within one extended family with members who identify as Alaskan Native. The seven participants were interviewed about their own self-identity, perceptions regarding genetic ancestry estimation, and their knowledge of oral family history. Additionally, each participant consented to having his or her genetic ancestry estimated. The researchers also surveyed ancestry-related documents, such as census records, birth certificates, and Certificates of Indian Blood. These three different perspectives-oral family history and self-identity, genetic ancestry estimation, historical and legal documentation-illustrate the complex nature of ancestry-related identity within the context of indigenous and colonial interactions in North America. While estimates of genetic ancestry broadly reflected each individual's self-reported biogeographic ancestry and supported all described and historically reported biological relationships, the estimates did not always match federally recorded blood quantum values, nor did they provide any information on relationships at the tribe or clan level. Employing a multicomponent approach and engaging study participants may help to safeguard against genetic essentialism and provide a more nuanced understanding of ancestry-related identity within a larger political, legal, and historical context.

Identification of a haptoglobin-hemoglobin complex in the Alaskan Least Cisco (Coregonus sardinella).

Science.gov (United States)

Wahl, S M; Boger, J K; Michael, V; Duffy, L K

1992-01-01

The hemoglobin and a hemoglobin binding protein have been characterized in the Arctic fish (Coregonus sardinella). The evolutionary significance of the hemoglobin and plasma protein differences between fish and mammals is still unresolved. Blood samples from the Alaskan Least Cisco were separated into plasma and hemoglobin fractions and the proteins in these fractions were analyzed both by alkaline agarose gel electrophoresis, by isolelectric focusing, and by capillary electrophoresis. Staining the plasma proteins gels with o-dianisidine revealed hemoglobin containing protein complexes. A hemoglobin-containing band was observed in hemolyzed plasma which did not migrate with free hemoglobin, and is believed to be hemoglobin-haptoglobin complex. Size exclusion chromatography further characterized the hemoglobin as disassociating freely into dimers, and hemoglobin-haptoglobin complex having a molecular weight greater then 200,000 daltons.

Regional management units for marine turtles: a novel framework for prioritizing conservation and research across multiple scales.

Science.gov (United States)

Wallace, Bryan P; DiMatteo, Andrew D; Hurley, Brendan J; Finkbeiner, Elena M; Bolten, Alan B; Chaloupka, Milani Y; Hutchinson, Brian J; Abreu-Grobois, F Alberto; Amorocho, Diego; Bjorndal, Karen A; Bourjea, Jerome; Bowen, Brian W; Dueñas, Raquel Briseño; Casale, Paolo; Choudhury, B C; Costa, Alice; Dutton, Peter H; Fallabrino, Alejandro; Girard, Alexandre; Girondot, Marc; Godfrey, Matthew H; Hamann, Mark; López-Mendilaharsu, Milagros; Marcovaldi, Maria Angela; Mortimer, Jeanne A; Musick, John A; Nel, Ronel; Pilcher, Nicolas J; Seminoff, Jeffrey A; Troëng, Sebastian; Witherington, Blair; Mast, Roderic B

2010-12-17

Resolving threats to widely distributed marine megafauna requires definition of the geographic distributions of both the threats as well as the population unit(s) of interest. In turn, because individual threats can operate on varying spatial scales, their impacts can affect different segments of a population of the same species. Therefore, integration of multiple tools and techniques--including site-based monitoring, genetic analyses, mark-recapture studies and telemetry--can facilitate robust definitions of population segments at multiple biological and spatial scales to address different management and research challenges. To address these issues for marine turtles, we collated all available studies on marine turtle biogeography, including nesting sites, population abundances and trends, population genetics, and satellite telemetry. We georeferenced this information to generate separate layers for nesting sites, genetic stocks, and core distributions of population segments of all marine turtle species. We then spatially integrated this information from fine- to coarse-spatial scales to develop nested envelope models, or Regional Management Units (RMUs), for marine turtles globally. The RMU framework is a solution to the challenge of how to organize marine turtles into units of protection above the level of nesting populations, but below the level of species, within regional entities that might be on independent evolutionary trajectories. Among many potential applications, RMUs provide a framework for identifying data gaps, assessing high diversity areas for multiple species and genetic stocks, and evaluating conservation status of marine turtles. Furthermore, RMUs allow for identification of geographic barriers to gene flow, and can provide valuable guidance to marine spatial planning initiatives that integrate spatial distributions of protected species and human activities. In addition, the RMU framework--including maps and supporting metadata--will be an

Regional Management Units for Marine Turtles: A Novel Framework for Prioritizing Conservation and Research across Multiple Scales

Science.gov (United States)

Wallace, Bryan P.; DiMatteo, Andrew D.; Hurley, Brendan J.; Finkbeiner, Elena M.; Bolten, Alan B.; Chaloupka, Milani Y.; Hutchinson, Brian J.; Abreu-Grobois, F. Alberto; Amorocho, Diego; Bjorndal, Karen A.; Bourjea, Jerome; Bowen, Brian W.; Dueñas, Raquel Briseño; Casale, Paolo; Choudhury, B. C.; Costa, Alice; Dutton, Peter H.; Fallabrino, Alejandro; Girard, Alexandre; Girondot, Marc; Godfrey, Matthew H.; Hamann, Mark; López-Mendilaharsu, Milagros; Marcovaldi, Maria Angela; Mortimer, Jeanne A.; Musick, John A.; Nel, Ronel; Pilcher, Nicolas J.; Seminoff, Jeffrey A.; Troëng, Sebastian; Witherington, Blair; Mast, Roderic B.

2010-01-01

Background Resolving threats to widely distributed marine megafauna requires definition of the geographic distributions of both the threats as well as the population unit(s) of interest. In turn, because individual threats can operate on varying spatial scales, their impacts can affect different segments of a population of the same species. Therefore, integration of multiple tools and techniques — including site-based monitoring, genetic analyses, mark-recapture studies and telemetry — can facilitate robust definitions of population segments at multiple biological and spatial scales to address different management and research challenges. Methodology/Principal Findings To address these issues for marine turtles, we collated all available studies on marine turtle biogeography, including nesting sites, population abundances and trends, population genetics, and satellite telemetry. We georeferenced this information to generate separate layers for nesting sites, genetic stocks, and core distributions of population segments of all marine turtle species. We then spatially integrated this information from fine- to coarse-spatial scales to develop nested envelope models, or Regional Management Units (RMUs), for marine turtles globally. Conclusions/Significance The RMU framework is a solution to the challenge of how to organize marine turtles into units of protection above the level of nesting populations, but below the level of species, within regional entities that might be on independent evolutionary trajectories. Among many potential applications, RMUs provide a framework for identifying data gaps, assessing high diversity areas for multiple species and genetic stocks, and evaluating conservation status of marine turtles. Furthermore, RMUs allow for identification of geographic barriers to gene flow, and can provide valuable guidance to marine spatial planning initiatives that integrate spatial distributions of protected species and human activities. In addition

Marine iguanas die from trace oil pollution.

Science.gov (United States)

Wikelski, Martin; Wong, Vanessa; Chevalier, Brett; Rattenborg, Niels; Snell, Howard L

2002-06-06

An oil tanker ran aground on the Galapagos island of San Cristóbal on 17 January 2001, spilling roughly three million litres of diesel and bunker oil. The slick started to spread westwards and was dispersed by strong currents, so only a few marine animals were killed immediately as a result. Here we draw on the long-term data sets gathered before the spill to show that a population of marine iguanas (Amblyrhychus cristatus) on Sante Fe island suffered a massive 62% mortality in the year after the accident, due to a small amount of residual oil contamination in the sea. Another population on the more remote island of Genovesa was unaffected.

A RAB3GAP1 SINE Insertion in Alaskan Huskies with Polyneuropathy, Ocular Abnormalities, and Neuronal Vacuolation (POANV Resembling Human Warburg Micro Syndrome 1 (WARBM1

Directory of Open Access Journals (Sweden)

Michaela Wiedmer

2016-02-01

Full Text Available We observed a hereditary phenotype in Alaskan Huskies that was characterized by polyneuropathy with ocular abnormalities and neuronal vacuolation (POANV. The affected dogs developed a progressive severe ataxia, which led to euthanasia between 8 and 16 months of age. The pedigrees were consistent with a monogenic autosomal recessive inheritance. We localized the causative genetic defect to a 4 Mb interval on chromosome 19 by a combined linkage and homozygosity mapping approach. Whole genome sequencing of one affected dog, an obligate carrier, and an unrelated control revealed a 218-bp SINE insertion into exon 7 of the RAB3GAP1 gene. The SINE insertion was perfectly associated with the disease phenotype in a cohort of 43 Alaskan Huskies, and it was absent from 541 control dogs of diverse other breeds. The SINE insertion induced aberrant splicing and led to a transcript with a greatly altered exon 7. RAB3GAP1 loss-of-function variants in humans cause Warburg Micro Syndrome 1 (WARBM1, which is characterized by additional developmental defects compared to canine POANV, whereas Rab3gap1-deficient mice have a much milder phenotype than either humans or dogs. Thus, the RAB3GAP1 mutant Alaskan Huskies provide an interesting intermediate phenotype that may help to better understand the function of RAB3GAP1 in development. Furthermore, the identification of the presumed causative genetic variant will enable genetic testing to avoid the nonintentional breeding of affected dogs.

Marine Fish Hybridization

KAUST Repository

He, Song

2017-04-01

Natural hybridization is reproduction (without artificial influence) between two or more species/populations which are distinguishable from each other by heritable characters. Natural hybridizations among marine fishes were highly underappreciated due to limited research effort; it seems that this phenomenon occurs more often than is commonly recognized. As hybridization plays an important role in biodiversity processes in the marine environment, detecting hybridization events and investigating hybridization is important to understand and protect biodiversity. The first chapter sets the framework for this disseration study. The Cohesion Species Concept was selected as the working definition of a species for this study as it can handle marine fish hybridization events. The concept does not require restrictive species boundaries. A general history and background of natural hybridization in marine fishes is reviewed during in chapter as well. Four marine fish hybridization cases were examed and documented in Chapters 2 to 5. In each case study, at least one diagnostic nuclear marker, screened from among ~14 candidate markers, was found to discriminate the putative hybridizing parent species. To further investigate genetic evidence to support the hybrid status for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations together, the potential reasons that triggered each hybridization events and the potential genetic/ecology effects could be discussed. In the last chapter, sequences from 82 pairs of hybridizing parents species (for which COI barcoding sequences were available either on GenBank or in our lab) were collected. By comparing the COI fragment p-distance between each hybridizing parent species, some general questions about marine fish hybridization were discussed: Is

Productivity responses of a widespread marine piscivore, Gadus morhua, to oceanic thermal extremes and trends

DEFF Research Database (Denmark)

Mantzouni, Irene; MacKenzie, Brian

2010-01-01

Climate change will have major consequences for population dynamics and life histories of marine biota as it progresses in the twenty-first century. These impacts will differ in magnitude and direction for populations within individual marine species whose geographical ranges span large gradients...

Factors behind increasing ocean use: the IPAT equation and the marine environment

DEFF Research Database (Denmark)

Hegland, Troels Jacob

2018-01-01

to the need for specific management and governance intended to protect the marine environment. With reference to a few, selected examples related to fishing, which is one of the main anthropogenic stressors of the marine environment, it is illustrated how increasing ocean use—and associated pressure...... on the marine environment—can be seen as rooted in a combination of increasing population and human development. In doing so, the chapter departs from the IPAT equation, which is a classic way to explain changes in the environmental impacts of human activities as a product of three factors: population...

Late Cenozoic Arctic Ocean sea ice and terrestrial paleoclimate.

Science.gov (United States)

Carter, L.D.; Brigham-Grette, J.; Marincovich, L.; Pease, V.L.; Hillhouse, J.W.

1986-01-01

Sea otter remains found in deposits of two marine transgressions (Bigbendian and Fishcreekian) of the Alaskan Arctic Coastal Plain which occurred between 2.4 and 3 Ma suggest that during these two events the southern limit of seasonal sea ice was at least 1600 km farther north than at present in Alaskan waters. Perennial sea ice must have been severely restricted or absent, and winters were warmer than at present during these two sea-level highstands. Paleomagnetic, faunal, and palynological data indicate that the later transgression (Fishcreekian) occurred during the early part of the Matuyama Reversed-Polarity Chron. -from Authors

Population Change in a Marine Bird Colony is Driven By Changes in Recruitment

Directory of Open Access Journals (Sweden)

Anthony J. Gaston

2011-12-01

sample. Hence the trend is determined by the recruitment decisions of externally reared birds, rather than demographic factors operating on the local breeding population, an unusual situation for a colonial marine bird. Because of the contraction in the colony it may now be subject to a level of predation pressure from which recovery will be impossible without some form of intervention.

Protection of Marine Fish Stocks at Risk of Extinction

Science.gov (United States)

J.A. Musick; S.A. Berkeley; G.M. Cailliet; M. Camhi; G. Huntsman; M. Nammack; Melvin L. Warren

2000-01-01

The American Fisheries Society (AFS) recommends that registory agencies closely scrutinize both marine fish and invertebrate stocks that may be at risk of extinction and take remedial action before populations are threatened or endungered. Initial AFS analyses of marine stocks at risk in North America show at least four primary geographic "hot spots" with...

Comparing marine and terrestrial ecosystems: Implications for the design of coastal marine reserves

Science.gov (United States)

Carr, M.H.; Neigel, J.E.; Estes, J.A.; Andelman, S.; Warner, R.R.; Largier, J. L.

2003-01-01

Concepts and theory for the design and application of terrestrial reserves is based on our understanding of environmental, ecological, and evolutionary processes responsible for biological diversity and sustainability of terrestrial ecosystems and how humans have influenced these processes. How well this terrestrial-based theory can be applied toward the design and application of reserves in the coastal marine environment depends, in part, on the degree of similarity between these systems. Several marked differences in ecological and evolutionary processes exist between marine and terrestrial ecosystems as ramifications of fundamental differences in their physical environments (i.e., the relative prevalence of air and water) and contemporary patterns of human impacts. Most notably, the great extent and rate of dispersal of nutrients, materials, holoplanktonic organisms, and reproductive propagules of benthic organisms expand scales of connectivity among near-shore communities and ecosystems. Consequently, the "openness" of marine populations, communities, and ecosystems probably has marked influences on their spatial, genetic, and trophic structures and dynamics in ways experienced by only some terrestrial species. Such differences appear to be particularly significant for the kinds of organisms most exploited and targeted for protection in coastal marine ecosystems (fishes and macroinvertebrates). These and other differences imply some unique design criteria and application of reserves in the marine environment. In explaining the implications of these differences for marine reserve design and application, we identify many of the environmental and ecological processes and design criteria necessary for consideration in the development of the analytical approaches developed elsewhere in this Special Issue.

Building research capacity with members of underserved American Indian/Alaskan Native communities: training in research ethics and the protection of human subjects.

Science.gov (United States)

Jetter, Karen M; Yarborough, Mark; Cassady, Diana L; Styne, Dennis M

2015-05-01

To develop a research ethics training course for American Indian/Alaskan Native health clinic staff and community researchers who would be conducting human subjects research. Community-based participatory research methods were used in facilitated discussions of research ethics centered around topics included in the Collaborative Institutional Training Initiative research ethics course. The community-based participatory research approach allowed all partners to jointly develop a research ethics training program that was relevant for American Indian/Alaskan Native communities. All community and clinic partners were able to pass the Collaborative Institutional Training Initiative course they were required to pass so that they could be certified to conduct research with human subjects on federally funded projects. In addition, the training sessions provided a foundation for increased community oversight of research. By using a collaborative process to engage community partners in research ethics discussions, rather than either an asynchronous online or a lecture/presentation format, resulted in significant mutual learning about research ethics and community concerns about research. This approach requires university researchers to invest time in learning about the communities in which they will be working prior to the training. © 2014 Society for Public Health Education.

Radon in homes: The Alaskan experience

International Nuclear Information System (INIS)

Seifert, R.D.

1990-01-01

For the past four years, since radon was first found to be a concern in Alaska in 1986, the interest and awareness of radon as a special housing and health concern has continued to grow. This paper will discuss the features of a house in Alaska which would characterize it as at risk for radon, and also those efforts at mitigation which have been most effective in reducing radon under Alaskan conditions. Clearly radon must be able to enter a home in order to be a problem. Riefenstuhl and Kline (personal communication, 1988) have analyzed the conditions for radon transport from soils to home interiors very lucidly through the following scheme: four factors must exist in a house locale for it to be a radon at risk house. Two of the factors are geological in nature: (1) there must be adequate uranium and therefore ample radon to provide a source for transport; (2) there must be enough permeability in the soil to allow rapid soil gas movement to carry radon from its origin to the interior of the home within two half-lives of time (six days) or so. The other two factors are determined by the structure of the house itself and the way in which it is operated: (3) the house must have soil contact and imperfections, holes, cracks, intentional perforations which allow movement of soil gas with radon through the envelope of the basement or crawlspace; (4) there must be a lower pressure inside the house than in the soil so that soil gas flows into the house. All four of these characteristics are required to have radon be a problem. The absence of any single characteristic will eliminate radon (in general). This presents a series of options for mitigation of radon then, since elimination of any of the four characteristics will mitigate radon

Population Structure and Adaptive Divergence in a High Gene Flow Marine Fish: The Small Yellow Croaker (Larimichthys polyactis.

Directory of Open Access Journals (Sweden)

Bing-Jian Liu

Full Text Available The spatial distribution of genetic diversity has been long considered as a key component of policy development for management and conservation of marine fishes. However, unraveling the population genetic structure of migratory fish species is challenging due to high potential for gene flow. Despite the shallow population differentiation revealed by putatively neutral loci, the higher genetic differentiation with panels of putatively adaptive loci could provide greater resolution for stock identification. Here, patterns of population differentiation of small yellow croaker (Larimichthys polyactis were investigated by genotyping 15 highly polymorphic microsatellites in 337 individuals of 15 geographic populations collected from both spawning and overwintering grounds. Outlier analyses indicated that the locus Lpol03 might be under directional selection, which showed a strong homology with Grid2 gene encoding the glutamate receptor δ2 protein (GluRδ2. Based on Lpol03, two distinct clusters were identified by both STRUCTURE and PCoA analyses, suggesting that there were two overwintering aggregations of L. polyactis. A novel migration pattern was suggested for L. polyactis, which was inconsistent with results of previous studies based on historical fishing yield statistics. These results provided new perspectives on the population genetic structure and migratory routes of L. polyactis, which could have significant implications for sustainable management and utilization of this important fishery resource.

Methods to examine reproductive biology in free-ranging, fully-marine mammals.

Science.gov (United States)

Lanyon, Janet M; Burgess, Elizabeth A

2014-01-01

Historical overexploitation of marine mammals, combined with present-day pressures, has resulted in severely depleted populations, with many species listed as threatened or endangered. Understanding breeding patterns of threatened marine mammals is crucial to assessing population viability, potential recovery and conservation actions. However, determining reproductive parameters of wild fully-marine mammals (cetaceans and sirenians) is challenging due to their wide distributions, high mobility, inaccessible habitats, cryptic lifestyles and in many cases, large body size and intractability. Consequently, reproductive biologists employ an innovative suite of methods to collect useful information from these species. This chapter reviews historic, recent and state-of-the-art methods to examine diverse aspects of reproduction in fully-aquatic mammals.

Cetaceans and Marine Debris: The Great Unknown

Directory of Open Access Journals (Sweden)

Mark Peter Simmonds

2012-01-01

Full Text Available Plastics and other marine debris have been found in the gastrointestinal tracts of cetaceans, including instances where large quantities of material have been found that are likely to cause impairment to digestive processes and other examples, where other morbidity and even death have resulted. In some instances, debris may have been ingested as a result of the stranding process and, in others, it may have been ingested when feeding. Those species that are suction or “ram” feeders may be most at risk. There is also evidence of entanglement of cetaceans in marine debris. However, it is usually difficult to distinguish entanglement in active fishing gear from that in lost or discarded gear. The overall significance of the threat from ingested plastics and other debris remains unclear for any population or species of cetaceans, although there are concerns for some taxa, including at the population level, and marine debris in the oceans continues to grow. Further research including the compilation of unpublished material and the investigation of important habitat areas is strongly recommended.

Marine Socio-Environmental Covariates: queryable global layers of environmental and anthropogenic variables for marine ecosystem studies.

Science.gov (United States)

Yeager, Lauren A; Marchand, Philippe; Gill, David A; Baum, Julia K; McPherson, Jana M

2017-07-01

Biophysical conditions, including climate, environmental stress, and habitat availability, are key drivers of many ecological processes (e.g., community assembly and productivity) and associated ecosystem services (e.g., carbon sequestration and fishery production). Furthermore, anthropogenic impacts such as coastal development and fishing can have drastic effects on the structure and function of marine ecosystems. Scientists need to account for environmental variation and human impacts to accurately model, manage, and conserve marine ecosystems. Although there are many types of environmental data available from global remote sensing and open-source data products, some are inaccessible to potential end-users because they exist as global layers in high temporal and spatial resolutions which require considerable computational power to process. Additionally, coastal locations often suffer from missing data or data quality issues which limit the utility of some global marine products for coastal sites. Herein we present the Marine Socio-Environmental Covariates dataset for the global oceans, which consists of environmental and anthropogenic variables summarized in ecologically relevant ways. The dataset includes four sets of environmental variables related to biophysical conditions (net primary productivity models corrected for shallow-water reflectance, wave energy including sheltered-coastline corrections) and landscape context (coral reef and land cover within varying radii). We also present two sets of anthropogenic variables, human population density (within varying radii) and distance to large population center, which can serve as indicators of local human impacts. We have paired global, summarized layers available for download with an online data querying platform that allows users to extract data for specific point locations with finer control of summary statistics. In creating these global layers and online platform, we hope to make the data accessible to a

Marine Ecological Footprint of Italian Mediterranean Fisheries

Directory of Open Access Journals (Sweden)

Federica de Leo

2014-10-01

Full Text Available The capacity of marine and coastal ecosystems to sustain seafood production and consumption is seldom accounted for and is not included in the signals that guide economic development. In this article, we review estimates of marine and coastal areas aimed at sustaining catches for seafood consumption. The aim of this paper is the assessment of the interactions between the environment, intended as a set of ecological subsystems in natural equilibrium, including the marine ecosystem, and the process of fisheries systems. In particular we analyze fisheries in Italy, which is the third biggest economy and the greatest consumer of seafood in the Eurozone, conducting an in-depth analysis of the Marine Ecological Footprint (MEF that evaluates the marine ecosystem area exploited by human populations to supply seafood and other marine products and services. The positioning of Italian fisheries shows a level of sustainability next to the threshold value. The analysis in the present study highlights the importance of absolute indicators in providing rough estimates about human dependence on ecological systems and recognizes the importance of those indicators, such as the Marine Footprint (expressed in % of Primary Production Required/Primary Production, in ensuring a high level of precision and accuracy in quantifying human activity impact on the environment.

Post-breeding migration routes of marine turtles from Bonaire and Klein Bonaire, Caribbean Netherlands

OpenAIRE

Becking, L.E.; Christianen, M.J.A.; Nava, M.I.; Miller, N.; Willis, S.; Dam, Van, R.P.

2016-01-01

The management of small rookeries is key to conserving the regional genetic diversity of marine turtle populations and requires knowledge on population connectivity between breeding and foraging areas. To elucidate the geographic scope of the populations of marine turtles breeding at Bonaire and Klein Bonaire (Caribbean Netherlands) we examined the post-breeding migratory behavior of 5 female loggerheads Caretta caretta, 4 female green turtles Chelonia mydas, and 2 male and 13 female hawksbil...

The gas century: worldwide LNG developments may deal death blow to Alaskan pipeline dream

International Nuclear Information System (INIS)

Lorenz, A.

2004-01-01

The growing interest in liquefied natural gas (LNG), which casts doubt on the viability of the Alaska gas pipeline, and the potential impacts on Canadian gas exports to the United States are discussed. There is currently a proposal before Congress for an Alaskan LNG project, and consensus appears to be building among American energy experts and law-makers that building a multitude of LNG facilities would be more flexible and cheaper than building the proposed Alaska pipeline. As further proof of the growing popularity of LNG, U.S. industry lobbyists are said to be rapidly gaining congressional support for the idea of building eight to ten billion cubic feet per day of LNG capacity along the U. S. coast. Either development, -- LNG facilities or the Alaska pipeline -- have the potential to seriously impact Canadian natural gas exports. If the Alaska pipeline is built, the addition of five billion cubic feet per day of new gas on the market would cause gas prices to fall; if the U.S. decides to subsidize its gas industry, Canadian gas would be put at a serious disadvantage. Conversely, if the Alaskan LNG proposal were to succeed, the potential demise of the Alaska pipeline would mean the loss of about 12,000 jobs that would be created during the Canadian construction phase of the pipeline, as well as the loss of tariffs. Industry experts predict that by 2005 LNG terminals will dot the periphery of the U. S. coast line; to prepare for these eventualities, Canadian companies, such as Irving Oil, TransCanada Pipelines and EnCana are taking note, and are scrambling not to be left out of the game. As proof of the seriousness of their concern, Irving Oil is adding a Can$500 million LNG facility to its Canaport terminal on the Scotian shelf; TCPL is working to supply an LNG terminal offshore Massachusetts, and EnCana is refurbishing a Louisiana salt cavern to prepare for storage of gas delivered to the Gulf Coast

Will life find a way? Evolution of marine species under global change.

Science.gov (United States)

Calosi, Piero; De Wit, Pierre; Thor, Peter; Dupont, Sam

2016-10-01

Projections of marine biodiversity and implementation of effective actions for its maintenance in the face of current rapid global environmental change are constrained by our limited understanding of species' adaptive responses, including transgenerational plasticity, epigenetics and natural selection. This special issue presents 13 novel studies, which employ experimental and modelling approaches to (i) investigate plastic and evolutionary responses of marine species to major global change drivers; (ii) ask relevant broad eco-evolutionary questions, implementing multiple species and populations studies; (iii) show the advantages of using advanced experimental designs and tools; (iv) construct novel model organisms for marine evolution; (v) help identifying future challenges for the field; and (vi) highlight the importance of incorporating existing evolutionary theory into management solutions for the marine realm. What emerges is that at least some populations of marine species have the ability to adapt to future global change conditions. However, marine organisms' capacity for adaptation appears finite, due to evolutionary trade-offs and possible rapid losses in genetic diversity. This further corroborates the idea that acquiring an evolutionary perspective on how marine life will respond to the selective pressure of future global changes will guide us in better identifying which conservation efforts will be most needed and most effective.

An evaluation of marine bird population trends following the Exxon Valdez oil spill, Prince William Sound, Alaska

International Nuclear Information System (INIS)

Lance, Brian K.; Irons, David B.; Kendall, Steven J.; McDonald, Lyman L.

2001-01-01

We examined post-spill trends (1989-1998) of marine bird populations in Prince William Sound (PWS) following the Exxon Valdez oil spill (EVOS) to evaluate recovery of injured taxa. Two criteria were employed. First, we examined population trends of injured taxa only in the oiled area of PWS using regression models. Second, we examined population trends of injured taxa in the oiled area relative to the unoiled area using homogeneity of the slopes tests. We considered a population recovering if there was a positive trend using either criteria. We considered a population not recovering if there was no trend using either criteria or a negative trend in the oiled area. A significant negative trend in the oiled area relative to the unoiled area was considered a continuing and increasing effect. Most taxa for which injury was previously demonstrated were not recovering and some taxa showed evidence of increasing effects nine years after the oil spill. Four taxa (loons Gavia spp, Harlequin Duck Histrionicus histrionicus, Bufflehead Bucephala spp, and North-western Crow Corvus caurinus) showed weak to very weak evidence of recovery. None of these taxa showed positive trends in both winter and summer. Nine taxa (grebes Podiceps spp, cormorants Phalacrocorax spp, Black Oystercatcher Haematopus bachmani, Mew Gull Larus canus, Glaucous-winged Gull Larus glaucescens, terns Sterna spp, murres Uria spp, Pigeon Guillemot Cepphus columba, and murrelets Brachyramphus spp) showed no evidence of recovery during summer or winter. Four taxa (scoters Melanitta spp, mergansers Mergus spp, goldeneyes Bucephala spp, and Black-legged Kittiwake Rissa tridactyla) showed evidence of continuing, increasing effects. We showed evidence of slow recovery, lack of recovery, and divergent population trends in many taxa which utilise shoreline and nearshore habitats where oil is likely to persist. Potential lingering spill effects and natural variability appear to be acting in concert in delaying

Radiation analysis in the major areas of marine fisheries research

International Nuclear Information System (INIS)

Murty, A.V.S.

1975-01-01

Radiation analysis has been a proven technique to solve, relatively easily and quickly, some of the pressing problems in marine fisheries to the utmost satisfaction. Major areas of marine fisheries research - namely, the determination of sea water characteristics, the productivity studies, the pollution effects, the population dynamics and the preservation of sea foods - wherein the radiation treatment is fully helpful are discussed in detail. The problems encountered in the marine fisheries in India in this context are also outlined. (author)

The ecology, status, and conservation of marine and shoreline birds on the west coast of Vancouver Island

International Nuclear Information System (INIS)

Vermeer, K.; Butler, R.W.; Morgan, K.H.

1992-01-01

A symposium was held to combine various disciplines to provide a review of current knowledge about the marine biology of the west coast of Vancouver Island, with a particular emphasis on birds. Papers were presented on the physical and biological environment of the study region, the population and breeding ecology of marine and shoreline birds, the distribution of marine and shoreline birds at sea, the effects of oil pollution on the bird population, and the conservation of marine and shoreline birds. Separate abstracts have been prepared for two papers from this symposium

The Smithsonian-led Marine Global Earth Observatory (MarineGEO): Proposed Model for a Collaborative Network Linking Marine Biodiversity to Ecosystem Processes

Science.gov (United States)

Duffy, J. E.

2016-02-01

Biodiversity - the variety of functional types of organisms - is the engine of marine ecosystem processes, including productivity, nutrient cycling, and carbon sequestration. Biodiversity remains a black box in much of ocean science, despite wide recognition that effectively managing human interactions with marine ecosystems requires understanding both structure and functional consequences of biodiversity. Moreover, the inherent complexity of biological systems puts a premium on data-rich, comparative approaches, which are best met via collaborative networks. The Smithsonian Institution's MarineGEO program links a growing network of partners conducting parallel, comparative research to understand change in marine biodiversity and ecosystems, natural and anthropogenic drivers of that change, and the ecological processes mediating it. The focus is on nearshore, seabed-associated systems where biodiversity and human population are concentrated and interact most, yet which fall through the cracks of existing ocean observing programs. MarineGEO offers a standardized toolbox of research modules that efficiently capture key elements of biological diversity and its importance in ecological processes across a range of habitats. The toolbox integrates high-tech (DNA-based, imaging) and low-tech protocols (diver surveys, rapid assays of consumer activity) adaptable to differing institutional capacity and resources. The model for long-term sustainability involves leveraging in-kind support among partners, adoption of best practices wherever possible, engagement of students and citizen scientists, and benefits of training, networking, and global relevance as incentives for participation. Here I highlight several MarineGEO comparative research projects demonstrating the value of standardized, scalable assays and parallel experiments for measuring fish and invertebrate diversity, recruitment, benthic herbivory and generalist predation, decomposition, and carbon sequestration. Key

Ice nuclei in marine air: biogenic particles or dust?

Directory of Open Access Journals (Sweden)

S. M. Burrows

2013-01-01

Full Text Available Ice nuclei impact clouds, but their sources and distribution in the atmosphere are still not well known. Particularly little attention has been paid to IN sources in marine environments, although evidence from field studies suggests that IN populations in remote marine regions may be dominated by primary biogenic particles associated with sea spray. In this exploratory model study, we aim to bring attention to this long-neglected topic and identify promising target regions for future field campaigns. We assess the likely global distribution of marine biogenic ice nuclei using a combination of historical observations, satellite data and model output. By comparing simulated marine biogenic immersion IN distributions and dust immersion IN distributions, we predict strong regional differences in the importance of marine biogenic IN relative to dust IN. Our analysis suggests that marine biogenic IN are most likely to play a dominant role in determining IN concentrations in near-surface-air over the Southern Ocean, so future field campaigns aimed at investigating marine biogenic IN should target that region. Climate-related changes in the abundance and emission of biogenic marine IN could affect marine cloud properties, thereby introducing previously unconsidered feedbacks that influence the hydrological cycle and the Earth's energy balance. Furthermore, marine biogenic IN may be an important aspect to consider in proposals for marine cloud brightening by artificial sea spray production.

Encyclopedic approach to Marine History of Russia

Directory of Open Access Journals (Sweden)

Andrey V. Ishin

2017-01-01

Full Text Available Marine direction of foreign policy is for Russia one of key. It is determined geographical position of the Russian state banks of which is washed plenty of Maureies. Also it is related to that considerable part of population lives on the coast of Russian Maureies, and industry, located in an off-shore bar brings, in a large contribution to the economy.Many Russian marine travelers were the discoverers of «new» earths. The contribution of the Russian scientists to the hydrophysical, geological and biological study of Maureies and Oceans is great. Russia possesses a navy, to the constituents approximately one-third of total tonnage of world VMF and one of large in the world a rybopromyslovym fleet. Transport ships under the flag of Russian Federation it is possible to meet planets in the remotest corners. In a number of areas of military shipbuilding and civil shipbuilding Russia had and continues to save priority.Enhanceable interest to the Seas and Oceans found the reflection in the fundamental Russian documents, including, in the Marine doctrine of Russian Federation, ratified Russia President in 2015. In it the value of marine spaces for the Russian state is marked. In the Marine doctrine of Russian Federation is writtenin: «The skilled providing, marine teaching and education play an important role in the increase of efficiency of marine activity. They are directed on preparation, bringing in and maintainance of skilled shots of all levels, maintenance of professionalism, marine traditions and not indifferent relation of citizens to marine history of country, serve positive presentation, propaganda and support of national marine policy, to marine activity and marine service in society».Marine direction, marine science about regions found a reflection in the publications of row of the Russian authors, devoted research of policy of Russia in such regions, as: Black Sea region, Caspian region, Arctic, and also in the series of Encyclopaedias

DNA Barcodes for Marine Biodiversity: Moving Fast Forward?

Directory of Open Access Journals (Sweden)

Adriana E. Radulovici

2010-03-01

Full Text Available ‘Biodiversity’ means the variety of life and it can be studied at different levels (genetic, species, ecosystem and scales (spatial and temporal. Last decades showed that marine biodiversity has been severely underestimated at all levels. In order to investigate diversity patterns and underlying processes, there is a need to know what species live in the marine environment. An emerging tool for species identification, DNA barcoding can reliably assign unknown specimens to known species, also flagging potential cryptic species and genetically distant populations. This paper will review the role of DNA barcoding for the study of marine biodiversity at the species level.

The Pelagos Sanctuary for Mediterranean marine mammals: Marine Protected Area (MPA) or marine polluted area? The case study of the striped dolphin (Stenella coeruleoalba).

Science.gov (United States)

Fossi, Maria Cristina; Panti, Cristina; Marsili, Letizia; Maltese, Silvia; Spinsanti, Giacomo; Casini, Silvia; Caliani, Ilaria; Gaspari, Stefania; Muñoz-Arnanz, Juan; Jimenez, Begoña; Finoia, Maria Grazia

2013-05-15

The concurrence of man-made pressures on cetaceans in the Mediterranean Sea is potentially affecting population stability and marine biodiversity. This needs to be proven for the only pelagic marine protected area in the Mediterranean Sea: the Pelagos Sanctuary for Mediterranean Marine Mammals. Here we applied a multidisciplinary tool, using diagnostic markers elaborated in a statistical model to rank toxicological stress in Mediterranean cetaceans. As a case study we analyzed persistent, bioaccumulative and toxic chemicals combined with a wide range of diagnostic markers of exposure to anthropogenic contaminants and genetic variation as marker of genetic erosion in striped dolphin (Stenella coeruleoalba) skin biopsies. Finally, a statistical model was applied to obtain a complete toxicological profile of the striped dolphin in the Pelagos Sanctuary and other Mediterranean areas (Ionian Sea and Strait of Gibraltar). Here we provide the first complete evidence of the toxicological stress in cetaceans living in Pelagos Sanctuary. Copyright © 2013 Elsevier Ltd. All rights reserved.

Whitemouth croaker, Micropogonias furnieri, trapped in a freshwater coastal lagoon: a natural comparison of freshwater and marine influences on otolith chemistry

Directory of Open Access Journals (Sweden)

Cristiano Q. de Albuquerque

Full Text Available Strontium and barium incorporation into otoliths was compared between whitemouth croaker, Micropogonias furnieri, collected from an entrapped freshwater population (Mirim Lagoon and a normal marine/estuarine population in southern Brazil. Chemical analysis was performed using LA-ICPMS with the objective of validating the effects of marine and freshwater environments on Sr and Ba incorporation as a basis for further investigation of marine and freshwater connectivity of M. furnieri. The freshwater population was dominated by older fish with mean ±SD age of 34±1 y, whereas the coastal samples were dominated by younger fish of 14±7 y. Comparison of strontium and barium incorporation among otolith life-history profiles indicated significantly higher barium and lower strontium for the freshwater population compared to the marine population. Furthermore, comparison of otolith material deposited in the freshwater, estuarine and marine life-history phases demonstrated clear differences among these environments. Mean concentrations of strontium and barium in otoliths of M. furnieri were respectively 710 and 112 µg g-1 for freshwater, 2069 and 16.7 µg g-1 for estuarine, and 2990 and 2.7 µg g-1 for marine life-history phases. Barium concentrations in otoliths from the freshwater population of M. furnieri appeared high relative to other freshwater species. Strontium levels across life-history profiles of marine fish increased with age from 2000 to 2900 µg g-1, possibly indicating more time spent in marine than estuarine waters with age. In contrast, for the freshwater population, strontium levels decreased during the first year of life approximately to 700 µg g-1, and remained low and stable thereafter, consistent with the early life-history occurring in an estuarine environment prior to entrapment in Mirim Lagoon. The results confirm the strong and opposite effects of marine and freshwater environments on incorporation of barium and strontium into

Gene Expression in the Three-Spined Stickleback (Gasterosteus aculeatus) of Marine and Freshwater Ecotypes.

Science.gov (United States)

Rastorguev, S M; Nedoluzhko, A V; Gruzdeva, N M; Boulygina, E S; Tsygankova, S V; Oshchepkov, D Y; Mazur, A M; Prokhortchouk, E B; Skryabin, K G

2018-01-01

Three-spine stickleback (Gasterosteus aculeatus) is a well-known model organism that is routinely used to explore microevolution processes and speciation, and the number of studies related to this fish has been growing recently. The main reason for the increased interest is the processes of freshwater adaptation taking place in natural populations of this species. Freshwater three-spined stickleback populations form when marine water three-spined sticklebacks fish start spending their entire lifecycle in freshwater lakes and streams. To boot, these freshwater populations acquire novel biological traits during their adaptation to a freshwater environment. The processes taking place in these populations are of great interest to evolutionary biologists. Here, we present differential gene expression profiling in G. aculeatus gills, which was performed in marine and freshwater populations of sticklebacks. In total, 2,982 differentially expressed genes between marine and freshwater populations were discovered. We assumed that differentially expressed genes were distributed not randomly along stickleback chromosomes and that they are regularly observed in the "divergence islands" that are responsible for stickleback freshwater adaptation.

Advances in the Application of Genetics in Marine Turtle Biology and Conservation

Directory of Open Access Journals (Sweden)

Lisa M. Komoroske

2017-06-01

Full Text Available Marine turtles migrate across long distances, exhibit complex life histories, and occupy habitats that are difficult to observe. These factors present substantial challenges to understanding fundamental aspects of their biology or assessing human impacts, many of which are important for the effective conservation of these threatened and endangered species. The early development and application of genetic tools made important contributions to understanding marine turtle population and evolutionary biology, such as providing evidence of regional natal homing by breeding adults, establishing connectivity between rookeries and foraging habitats, and determining phylogeography and broad scale stock structure for most marine turtle species. Recent innovations in molecular technologies, statistical methods, and creative application of genetic tools have significantly built upon this knowledge to address key questions in marine turtle biology and conservation management. Here, we evaluate the latest major advances and potential of marine turtle genetic applications, including improved resolution and large-scale syntheses of population structure, connectivity and phylogeography, estimation of key demographic rates such as age to maturity and operational or breeding sex ratios, insight into reproductive strategies and behavior, and assessment of differential human impacts among populations. We then discuss remaining challenges and emerging capabilities, such as rapid, multiplexed genotyping, and investigation of the genomic underpinnings of adaptive variation afforded by high-throughput sequencing technologies.

The whale pump: marine mammals enhance primary productivity in a coastal basin.

Directory of Open Access Journals (Sweden)

Joe Roman

Full Text Available It is well known that microbes, zooplankton, and fish are important sources of recycled nitrogen in coastal waters, yet marine mammals have largely been ignored or dismissed in this cycle. Using field measurements and population data, we find that marine mammals can enhance primary productivity in their feeding areas by concentrating nitrogen near the surface through the release of flocculent fecal plumes. Whales and seals may be responsible for replenishing 2.3×10(4 metric tons of N per year in the Gulf of Maine's euphotic zone, more than the input of all rivers combined. This upward "whale pump" played a much larger role before commercial harvest, when marine mammal recycling of nitrogen was likely more than three times atmospheric N input. Even with reduced populations, marine mammals provide an important ecosystem service by sustaining productivity in regions where they occur in high densities.

{sup 210}Po in marine organisms consumed by the population of Seville; {sup 210}PO en organismos marinos consumidos por la poblacion sevillana

Energy Technology Data Exchange (ETDEWEB)

Diaz-Frances, I.; Mantero, J.; Manjon, G.; Garcia-Tenorio, R.

2011-07-01

The natural radionuclide {sup 210}Po is one belonging to the series of uranium, which is ubiquitously present in trace quantities in the various environmental compartments (water, soil, air) and through its route along the food chain may end incorporated into the human body via food or water intake. This radionuclide is highly radio toxic, presenting the highest value for the ingestion dose coefficient for adults. The Spanish population is an important component of their diet to marine products. found higher values of ingestion dose in the Spanish population compared to other European populations where the culture of introducing fish into your diet is not so entered. The study detailed here estimates the contribution of {sup 2}10Po to the ingestion dose received by the Sevillian population due to consumption of fish, mollusks and crustaceans. The results obtained in this study will be presented and discussed in this paper. (Author)

Understanding the potential risk to marine mammals from collision with tidal turbines

Energy Technology Data Exchange (ETDEWEB)

Copping, Andrea; Grear, Molly; Jepsen, Richard; Chartrand, Chris; Gorton, Alicia

2017-09-01

The advent of the marine renewable energy industry has raised questions, particularly for tidal turbines, about potential threats to populations of marine mammals. This research examines the sequence of behavioral events that lead up to a potential collision of a marine mammal with a tidal turbine, within the context of the physical environment, the attributes of the tidal device, and the biomechanical properties of a marine mammal that may resist injury from a tidal blade collision. There are currently no data available to determine the risk of collision to a marine mammal, and obtaining those data would be extremely difficult. The surrogate data examined in this research (likelihood of a marine mammal being in close proximity to a tidal turbine, biomechanics of marine mammal tissues, and engineering models) provide insight into the interaction.

First evidence and predictions of Plasmodium transmission in Alaskan bird populations.

Directory of Open Access Journals (Sweden)

Claire Loiseau

Full Text Available The unprecedented rate of change in the Arctic climate is expected to have major impacts on the emergence of infectious diseases and host susceptibility to these diseases. It is predicted that malaria parasites will spread to both higher altitudes and latitudes with global warming. Here we show for the first time that avian Plasmodium transmission occurs in the North American Arctic. Over a latitudinal gradient in Alaska, from 61°N to 67°N, we collected blood samples of resident and migratory bird species. We found both residents and hatch year birds infected with Plasmodium as far north as 64°N, providing clear evidence that malaria transmission occurs in these climates. Based on our empirical data, we make the first projections of the habitat suitability for Plasmodium under a future-warming scenario in Alaska. These findings raise new concerns about the spread of malaria to naïve host populations.

75 FR 1029 - Marine Mammals; File No. 14486

Science.gov (United States)

2010-01-08

..., Responsible Party), has applied in due form for a permit to receive, import, and export marine mammal... studies of population ecology, diet and nutrition, reproductive physiology, toxicology and health of...

78 FR 30273 - Takes of Marine Mammals Incidental to Specified Activities; Taking Marine Mammals Incidental to a...

Science.gov (United States)

2013-05-22

..., breathing, nursing, breeding, feeding, or sheltering [Level B harassment].'' Summary of Request We received... fish populations; however, the entire barge mooring project is scheduled to be completed by September...), biological (e.g., sounds produced by marine mammals, fish, and invertebrates), and anthropogenic sound (e.g...

75 FR 14425 - Marine Mammals; File No. 14486

Science.gov (United States)

2010-03-25

... rosmarus) annually for research on marine mammal population ecology, diet and nutrition, reproductive... such permit: (1) was applied for in good faith; (2) will not operate to the disadvantage of such...

Extinction risk and overfishing: reconciling conservation and fisheries perspectives on the status of marine fishes.

Science.gov (United States)

Davies, Trevor D; Baum, Julia K

2012-01-01

Anthropogenic disturbances are ubiquitous in the ocean, but their impacts on marine species are hotly debated. We evaluated marine fish statuses using conservation (Red List threatened or not) and fisheries (above or below reference points) metrics, compared their alignment, and diagnosed why discrepancies arise. Whereas only 13.5% of Red Listed marine fishes (n = 2952) are threatened, 40% and 21% of populations with stock assessments (n = 166) currently are below their more conservative and riskier reference points, respectively. Conservation and fisheries metrics aligned well (70.5% to 80.7%), despite their mathematical disconnect. Red Listings were not biased towards exaggerating threat status, and egregious errors, where populations were categorized at opposite extremes of fisheries and conservation metrics, were rare. Our analyses suggest conservation and fisheries scientists will agree on the statuses of exploited marine fishes in most cases, leaving only the question of appropriate management responses for populations of mutual concern still unresolved.

Behaviour of marine oil-degrading bacterial populations in a continuous culture system

Digital Repository Service at National Institute of Oceanography (India)

Mohandass, C.; David, J.J.; Nair, S.; LokaBharathi, P.A.; Chandramohan, D.

In pursuit of developing an oil-degrading microbial consortium, we used the principle of "plasmid assisted molecular breeding" (PAMB) in a continuous culture system. Three marine bacteria, Pseudomonas putida, Brevibacterium epidermidis...

Status of marine turtle rehabilitation in Queensland

Directory of Open Access Journals (Sweden)

Jaylene Flint

2017-03-01

Full Text Available Rehabilitation of marine turtles in Queensland has multifaceted objectives. It treats individual animals, serves to educate the public, and contributes to conservation. We examined the outcome from rehabilitation, time in rehabilitation, and subsequent recapture and restranding rates of stranded marine turtles between 1996 and 2013 to determine if the benefits associated with this practice are cost-effective as a conservation tool. Of 13,854 marine turtles reported as stranded during this 18-year period, 5,022 of these turtles were stranded alive with the remainder verified as dead or of unknown condition. A total of 2,970 (59% of these live strandings were transported to a rehabilitation facility. Overall, 1,173/2,970 (39% turtles were released over 18 years, 101 of which were recaptured: 77 reported as restrandings (20 dead, 13 alive subsequently died, 11 alive subsequently euthanized, 33 alive and 24 recaptured during normal marine turtle population monitoring or fishing activities. Of the turtles admitted to rehabilitation exhibiting signs of disease, 88% of them died, either unassisted or by euthanasia and 66% of turtles admitted for unknown causes of stranding died either unassisted or by euthanasia. All turtles recorded as having a buoyancy disorder with no other presenting problem or disorder recorded, were released alive. In Queensland, rehabilitation costs approximately $1,000 per animal per year admitted to a center, $2,583 per animal per year released, and $123,750 per animal per year for marine turtles which are presumably successfully returned to the functional population. This practice may not be economically viable in its present configuration, but may be more cost effective as a mobile response unit. Further there is certainly benefit giving individual turtles a chance at survival and educating the public in the perils facing marine turtles. As well, rehabilitation can provide insight into the diseases and environmental

Status of marine turtle rehabilitation in Queensland.

Science.gov (United States)

Flint, Jaylene; Flint, Mark; Limpus, Colin James; Mills, Paul

2017-01-01

Rehabilitation of marine turtles in Queensland has multifaceted objectives. It treats individual animals, serves to educate the public, and contributes to conservation. We examined the outcome from rehabilitation, time in rehabilitation, and subsequent recapture and restranding rates of stranded marine turtles between 1996 and 2013 to determine if the benefits associated with this practice are cost-effective as a conservation tool. Of 13,854 marine turtles reported as stranded during this 18-year period, 5,022 of these turtles were stranded alive with the remainder verified as dead or of unknown condition. A total of 2,970 (59%) of these live strandings were transported to a rehabilitation facility. Overall, 1,173/2,970 (39%) turtles were released over 18 years, 101 of which were recaptured: 77 reported as restrandings (20 dead, 13 alive subsequently died, 11 alive subsequently euthanized, 33 alive) and 24 recaptured during normal marine turtle population monitoring or fishing activities. Of the turtles admitted to rehabilitation exhibiting signs of disease, 88% of them died, either unassisted or by euthanasia and 66% of turtles admitted for unknown causes of stranding died either unassisted or by euthanasia. All turtles recorded as having a buoyancy disorder with no other presenting problem or disorder recorded, were released alive. In Queensland, rehabilitation costs approximately $1,000 per animal per year admitted to a center, $2,583 per animal per year released, and $123,750 per animal per year for marine turtles which are presumably successfully returned to the functional population. This practice may not be economically viable in its present configuration, but may be more cost effective as a mobile response unit. Further there is certainly benefit giving individual turtles a chance at survival and educating the public in the perils facing marine turtles. As well, rehabilitation can provide insight into the diseases and environmental stressors causing

Status of marine turtle rehabilitation in Queensland

Science.gov (United States)

Flint, Mark; Limpus, Colin James; Mills, Paul

2017-01-01

Rehabilitation of marine turtles in Queensland has multifaceted objectives. It treats individual animals, serves to educate the public, and contributes to conservation. We examined the outcome from rehabilitation, time in rehabilitation, and subsequent recapture and restranding rates of stranded marine turtles between 1996 and 2013 to determine if the benefits associated with this practice are cost-effective as a conservation tool. Of 13,854 marine turtles reported as stranded during this 18-year period, 5,022 of these turtles were stranded alive with the remainder verified as dead or of unknown condition. A total of 2,970 (59%) of these live strandings were transported to a rehabilitation facility. Overall, 1,173/2,970 (39%) turtles were released over 18 years, 101 of which were recaptured: 77 reported as restrandings (20 dead, 13 alive subsequently died, 11 alive subsequently euthanized, 33 alive) and 24 recaptured during normal marine turtle population monitoring or fishing activities. Of the turtles admitted to rehabilitation exhibiting signs of disease, 88% of them died, either unassisted or by euthanasia and 66% of turtles admitted for unknown causes of stranding died either unassisted or by euthanasia. All turtles recorded as having a buoyancy disorder with no other presenting problem or disorder recorded, were released alive. In Queensland, rehabilitation costs approximately $1,000 per animal per year admitted to a center, $2,583 per animal per year released, and $123,750 per animal per year for marine turtles which are presumably successfully returned to the functional population. This practice may not be economically viable in its present configuration, but may be more cost effective as a mobile response unit. Further there is certainly benefit giving individual turtles a chance at survival and educating the public in the perils facing marine turtles. As well, rehabilitation can provide insight into the diseases and environmental stressors causing

Acclimatization and Adaptive Capacity of Marine Species in a Changing Ocean.

Science.gov (United States)

Foo, S A; Byrne, M

To persist in an ocean changing in temperature, pH and other stressors related to climate change, many marine species will likely need to acclimatize or adapt to avoid extinction. If marine populations possess adequate genetic variation in tolerance to climate change stressors, species might be able to adapt to environmental change. Marine climate change research is moving away from single life stage studies where individuals are directly placed into projected scenarios ('future shock' approach), to focus on the adaptive potential of populations in an ocean that will gradually change over coming decades. This review summarizes studies that consider the adaptive potential of marine invertebrates to climate change stressors and the methods that have been applied to this research, including quantitative genetics, laboratory selection studies and trans- and multigenerational experiments. Phenotypic plasticity is likely to contribute to population persistence providing time for genetic adaptation to occur. Transgenerational and epigenetic effects indicate that the environmental and physiological history of the parents can affect offspring performance. There is a need for long-term, multigenerational experiments to determine the influence of phenotypic plasticity, genetic variation and transgenerational effects on species' capacity to persist in a changing ocean. However, multigenerational studies are only practicable for short generation species. Consideration of multiple morphological and physiological traits, including changes in molecular processes (eg, DNA methylation) and long-term studies that facilitate acclimatization will be essential in making informed predictions of how the seascape and marine communities will be altered by climate change. © 2016 Elsevier Ltd. All rights reserved.

The role of marine reserves in the replenishment of a locally-impacted population of anemonefish on the Great Barrier Reef

KAUST Repository

Bonin, Mary C.; Harrison, Hugo B.; Williamson, David H.; Frisch, Ashley J.; Saenz Agudelo, Pablo; Berumen, Michael L.; Jones, Geoffrey P.

2015-01-01

The development of parentage analysis to track the dispersal of juvenile offspring has given us unprecedented insight into the population dynamics of coral reef fishes. These tools now have the potential to inform fisheries management and species conservation, particularly for small fragmented populations under threat from exploitation and disturbance. In this study we resolve patterns of larval dispersal for a population of the anemonefish Amphiprion melanopus in the Keppel Islands (southern Great Barrier Reef). Habitat loss and fishing appear to have impacted this population and a network of no-take marine reserves currently protects 75% of the potential breeders. Using parentage analysis, we estimate that 21% of recruitment in the island group was generated locally, and that breeding adults living in reserves were responsible for 79% (31 out of 39) of these of locally-produced juveniles. Overall, the network of reserves was fully connected via larval dispersal; however one reserve was identified as a critical source of larvae for the island group. The population in the Keppel Islands also appears to be well-connected to other source populations at least 60 km away, given that 79% (145 out of 184) of the juveniles sampled remained unassigned in the parentage analysis. We estimated the effective size of the A. melanopus metapopulation to be 745 (582-993 95% CI) and recommend continued monitoring of its genetic status. Maintaining connectivity with populations beyond the Keppel Islands and recovery of local recruitment habitat, potentially through active restoration of host anemone populations, will be important for its long-term persistence.

The role of marine reserves in the replenishment of a locally-impacted population of anemonefish on the Great Barrier Reef

KAUST Repository

Bonin, Mary C.

2015-11-21

The development of parentage analysis to track the dispersal of juvenile offspring has given us unprecedented insight into the population dynamics of coral reef fishes. These tools now have the potential to inform fisheries management and species conservation, particularly for small fragmented populations under threat from exploitation and disturbance. In this study we resolve patterns of larval dispersal for a population of the anemonefish Amphiprion melanopus in the Keppel Islands (southern Great Barrier Reef). Habitat loss and fishing appear to have impacted this population and a network of no-take marine reserves currently protects 75% of the potential breeders. Using parentage analysis, we estimate that 21% of recruitment in the island group was generated locally, and that breeding adults living in reserves were responsible for 79% (31 out of 39) of these of locally-produced juveniles. Overall, the network of reserves was fully connected via larval dispersal; however one reserve was identified as a critical source of larvae for the island group. The population in the Keppel Islands also appears to be well-connected to other source populations at least 60 km away, given that 79% (145 out of 184) of the juveniles sampled remained unassigned in the parentage analysis. We estimated the effective size of the A. melanopus metapopulation to be 745 (582-993 95% CI) and recommend continued monitoring of its genetic status. Maintaining connectivity with populations beyond the Keppel Islands and recovery of local recruitment habitat, potentially through active restoration of host anemone populations, will be important for its long-term persistence.

Interannual variability in lower trophic levels on the Alaskan Shelf

Science.gov (United States)

Batten, Sonia D.; Raitsos, Dionysios E.; Danielson, Seth; Hopcroft, Russell; Coyle, Kenneth; McQuatters-Gollop, Abigail

2018-01-01

This study describes results from the first 16 years of the Continuous Plankton Recorder (CPR) program that has sampled the lower trophic levels (restricted to larger, hard-shelled phytoplankton and robust zooplankton taxa) on the Alaskan shelf. Sampling took place along transects from the open ocean across the shelf (to the entrance to Prince William Sound from 2000 to 2003 and into Cook Inlet from 2004 to 2015) to provide plankton abundance data, spring through autumn of each year. We document interannual variability in concentration and composition of the plankton community of the region over this time period. At least in part and through correlative relationships, this can be attributed to changes in the physical environment, particularly direct and indirect effects of temperature. For example; spring mixed layer depth is shown to influence the timing of the spring diatom peak and warmer years are biased towards smaller copepod species. A significant positive relationship between temperature, diatom abundance and zooplankton biomass existed from 2000 to 2013 but was not present in the warm years of 2014 and 2015. These results suggest that anomalous warming events, such as the "heat wave" of 2014-2015, could fundamentally influence typical lower trophic level patterns, possibly altering trophic interactions.

The physical impacts of microplastics on marine organisms: A review

International Nuclear Information System (INIS)

Wright, Stephanie L.; Thompson, Richard C.; Galloway, Tamara S.

2013-01-01

Plastic debris at the micro-, and potentially also the nano-scale, are widespread in the environment. Microplastics have accumulated in oceans and sediments worldwide in recent years, with maximum concentrations reaching 100 000 particles m 3 . Due to their small size, microplastics may be ingested by low trophic fauna, with uncertain consequences for the health of the organism. This review focuses on marine invertebrates and their susceptibility to the physical impacts of microplastic uptake. Some of the main points discussed are (1) an evaluation of the factors contributing to the bioavailability of microplastics including size and density; (2) an assessment of the relative susceptibility of different feeding guilds; (3) an overview of the factors most likely to influence the physical impacts of microplastics such as accumulation and translocation; and (4) the trophic transfer of microplastics. These findings are important in guiding future marine litter research and management strategies. -- Highlights: •Accumulation of plastic waste in the oceans has become a pressing issue. •Here we review the susceptibility of marine invertebrates to microplastic uptake. •Size, shape and abundance influence uptake; microfibres are considered most harmful. •Colonisation of microplastics could have population-level impacts. •Results will inform future marine litter research and management strategies. -- Here we review microplastic uptake in marine organisms and assess individual, population and community level effects, highlighting the most susceptible species

Does a No-Take Marine Protected Area Benefit Seahorses?

Science.gov (United States)

Harasti, David; Martin-Smith, Keith; Gladstone, William

2014-01-01

Seahorses are iconic charismatic species that are often used to ‘champion’ marine conservation causes around the world. As they are threatened in many countries by over-exploitation and habitat loss, marine protected areas (MPAs) could help with their protection and recovery. MPAs may conserve seahorses through protecting essential habitats and removing fishing pressures. Populations of White's seahorse, Hippocampus whitei, a species endemic to New South Wales, Australia, were monitored monthly from 2006 to 2009 using diver surveys at two sites within a no-take marine protected areas established in 1983, and at two control sites outside the no-take MPA sites. Predators of H. whitei were also identified and monitored. Hippocampus whitei were more abundant at the control sites. Seahorse predators (3 species of fish and 2 species of octopus) were more abundant within the no-take MPA sites. Seahorse and predator abundances were negatively correlated. Substantial variability in the seahorse population at one of the control sites reinforced the importance of long-term monitoring and use of multiple control sites to assess the outcomes of MPAs for seahorses. MPAs should be used cautiously to conserve seahorse populations as there is the risk of a negative impact through increased predator abundance. PMID:25137253

Does a no-take marine protected area benefit seahorses?

Directory of Open Access Journals (Sweden)

David Harasti

Full Text Available Seahorses are iconic charismatic species that are often used to 'champion' marine conservation causes around the world. As they are threatened in many countries by over-exploitation and habitat loss, marine protected areas (MPAs could help with their protection and recovery. MPAs may conserve seahorses through protecting essential habitats and removing fishing pressures. Populations of White's seahorse, Hippocampus whitei, a species endemic to New South Wales, Australia, were monitored monthly from 2006 to 2009 using diver surveys at two sites within a no-take marine protected areas established in 1983, and at two control sites outside the no-take MPA sites. Predators of H. whitei were also identified and monitored. Hippocampus whitei were more abundant at the control sites. Seahorse predators (3 species of fish and 2 species of octopus were more abundant within the no-take MPA sites. Seahorse and predator abundances were negatively correlated. Substantial variability in the seahorse population at one of the control sites reinforced the importance of long-term monitoring and use of multiple control sites to assess the outcomes of MPAs for seahorses. MPAs should be used cautiously to conserve seahorse populations as there is the risk of a negative impact through increased predator abundance.

RNA:DNA Ratio and Other Nucleic Acid Derived Indices in Marine Ecology

Directory of Open Access Journals (Sweden)

Luis Chícharo

2008-08-01

Full Text Available Some of most used indicators in marine ecology are nucleic acid-derived indices. They can be divided by target levels in three groups: 1 at the organism level as ecophysiologic indicators, indicators such as RNA:DNA ratios, DNA:dry weight and RNA:protein, 2 at the population level, indicators such as growth rate, starvation incidence or fisheries impact indicators, and 3 at the community level, indicators such as trophic interactions, exergy indices and prey identification. The nucleic acids derived indices, especially RNA:DNA ratio, have been applied with success as indicators of nutritional condition, well been and growth in marine organisms. They are also useful as indicators of natural or anthropogenic impacts in marine population and communities, such as upwelling or dredge fisheries, respectively. They can help in understanding important issues of marine ecology such as trophic interactions in marine environment, fish and invertebrate recruitment failure and biodiversity changes, without laborious work of counting, measuring and identification of small marine organisms. Besides the objective of integrate nucleic acid derived indices across levels of organization, the paper will also include a general characterization of most used nucleic acid derived indices in marine ecology and also advantages and limitations of them. We can conclude that using indicators, such RNA:DNA ratios and other nucleic acids derived indices concomitantly with organism and ecosystems measures of responses to climate change (distribution, abundance, activity, metabolic rate, survival will allow for the development of more rigorous and realistic predictions of the effects of anthropogenic climate change on marine systems.

Mutual aid in oil spill response: The Alaskan north slope model

International Nuclear Information System (INIS)

McKenzie, B.; Ingram, N.

1993-01-01

The Alaskan Arctic Region provides one of the world's most remote and challenging environments in which to mount an oil spill response. To facilitate the timeliness and appropriateness of the response, Alaska Clean Seas (ACS) and the operators of the North Slope oil fields have implemented a mutual aid concept for spill response. The concept is based upon each operator on the North Slope maintaining its own inventory of personnel [a spill response team (SRT)] and equipment that is available on short notice to respond to a spill. If the spill exceeds the responsible operator's resources, additional resources can be obtained from other operators and/or ACS through mutual aid. Individuals from diverse organizations are brought together in a mutual aid event. To allow different organizations to function effectively in a multi-organizational environment, a common management structure was required. The structure chosen for the North Slope was the incident command system (ICS). A key concern when discussing mutual aid is the provision of indemnification from liability for responders. For the North Slope, ACS and its member companies are indemnified when responding to a spill through provisions in the ACS charter and the ACS response action contract

Extent of endocrine disruption in fish of western and Alaskan National Parks

Science.gov (United States)

Schreck, Carl B.; Kent, Michael

2013-01-01

In 2008 2009, 998 fish were collected from 43 water bodies across 11 western Alaskan national parks and analyzed for reproductive abnormalities. Exposure to estrogenic substances such as pesticides can induce abnormalities like intersex. Results suggest there is a greater propensity for male intersex fish collected from parks located in the Rocky Mountains, and specifically in Rocky Mountain NP. Individual male intersex fish were also identified at Lassen Volcanic, Yosemite, and WrangellSt. Elias NPs. The preliminary finding of female intersex was determined to be a false positive. The overall goal of this project was to assess the general health of fish from eleven western national parks to infer whether health impacts may be linked to contaminant health thresholds for animal andor human health. This was accomplished by evaluating the presence of intersex fish with eggs developing in male gonads or sperm developing in female gonads using histology. In addition, endocrine disrupting compounds and other contaminants were quantified in select specimens. General histologic appearance of the gonadal tissue and spleen were observed to assess health.

Cost-Optimal Pathways to 75% Fuel Reduction in Remote Alaskan Villages: Preprint

Energy Technology Data Exchange (ETDEWEB)

Simpkins, Travis; Cutler, Dylan; Hirsch, Brian; Olis, Dan; Anderson, Kate

2015-10-28

There are thousands of isolated, diesel-powered microgrids that deliver energy to remote communities around the world at very high energy costs. The Remote Communities Renewable Energy program aims to help these communities reduce their fuel consumption and lower their energy costs through the use of high penetration renewable energy. As part of this program, the REopt modeling platform for energy system integration and optimization was used to analyze cost-optimal pathways toward achieving a combined 75% reduction in diesel fuel and fuel oil consumption in a select Alaskan village. In addition to the existing diesel generator and fuel oil heating technologies, the model was able to select from among wind, battery storage, and dispatchable electric heaters to meet the electrical and thermal loads. The model results indicate that while 75% fuel reduction appears to be technically feasible it may not be economically viable at this time. When the fuel reduction target was relaxed, the results indicate that by installing high-penetration renewable energy, the community could lower their energy costs by 21% while still reducing their fuel consumption by 54%.

The associations of a marine diet with plasma lipids, blood glucose, blood pressure and obesity among the inuit in Greenland

DEFF Research Database (Denmark)

Bjerregaard, P; Pedersen, H S; Mulvad, G

2000-01-01

OBJECTIVE: To analyse the associations between the intake of fish and marine mammals and risk factors for cardiovascular disease, ie lipid profile, fasting blood glucose, blood pressure and obesity, in a population whose average consumption of n-3 fatty acids is high compared with Western countries...... and not statistically significant. The pattern was similar within groups with low, medium and high consumption of marine food. CONCLUSIONS: There are statistically significant associations between the consumption of marine food and certain lipid fractions in the blood also in this population with a very high average...... intake of marine food. The observation that blood glucose is positively associated with marine diet in a population survey is new and should be repeated. There was good agreement between the results for the reported consumption of seal and those for the biomarkers. SPONSORSHIP: The study was financially...

Climate Change and Genetic Structure of Leading Edge and Rear End Populations in a Northwards Shifting Marine Fish Species, the Corkwing Wrasse (Symphodus melops).

Science.gov (United States)

Knutsen, Halvor; Jorde, Per Erik; Gonzalez, Enrique Blanco; Robalo, Joana; Albretsen, Jon; Almada, Vitor

2013-01-01

One mechanism by which marine organisms may respond to climate shifts is range shifts. The corkwing wrasse (Symphodus melops) is a temperate fish species, inhabiting the coasts of Europe, that show strong indications of current as well as historical (ice-age) range shifts towards the north. Nine neutral microsatellite DNA markers were screened to study genetic signatures and spatial population structure over the entire geographic and thermal gradient of the species from Portugal to Norway. A major genetic break (F ST  = 0.159 average among pairs) was identified between Scandinavian and more southern populations, with a marked reduction (30% or more) in levels of genetic variability in Scandinavia. The break is probably related to bottleneck(s) associated with post-glacial colonization of the Scandinavian coasts, and indicates a lack of present gene flow across the North Sea. The lack of gene flow can most likely be attributed to the species' need for rocky substrate for nesting and a relatively short pelagic larval phase, limiting dispersal by ocean currents. These findings demonstrate that long-distance dispersal may be severely limited in the corkwing wrasse, and that successful range-shifts following present climate change may be problematic for this and other species with limited dispersal abilities, even in the seemingly continuous marine environment.

Humpback whale populations share a core skin bacterial community: towards a health index for marine mammals?

Directory of Open Access Journals (Sweden)

Amy Apprill

Full Text Available Microbes are now well regarded for their important role in mammalian health. The microbiology of skin--a unique interface between the host and environment--is a major research focus in human health and skin disorders, but is less explored in other mammals. Here, we report on a cross-population study of the skin-associated bacterial community of humpback whales (Megaptera novaeangliae, and examine the potential for a core bacterial community and its variability with host (endogenous or geographic/environmental (exogenous specific factors. Skin biopsies or freshly sloughed skin from 56 individuals were sampled from populations in the North Atlantic, North Pacific and South Pacific oceans and bacteria were characterized using 454 pyrosequencing of SSU rRNA genes. Phylogenetic and statistical analyses revealed the ubiquity and abundance of bacteria belonging to the Flavobacteria genus Tenacibaculum and the Gammaproteobacteria genus Psychrobacter across the whale populations. Scanning electron microscopy of skin indicated that microbial cells colonize the skin surface. Despite the ubiquity of Tenacibaculum and Psychrobater spp., the relative composition of the skin-bacterial community differed significantly by geographic area as well as metabolic state of the animals (feeding versus starving during migration and breeding, suggesting that both exogenous and endogenous factors may play a role in influencing the skin-bacteria. Further, characteristics of the skin bacterial community from these free-swimming individuals were assembled and compared to two entangled and three dead individuals, revealing a decrease in the central or core bacterial community members (Tenacibaculum and Psychrobater spp., as well as the emergence of potential pathogens in the latter cases. This is the first discovery of a cross-population, shared skin bacterial community. This research suggests that the skin bacteria may be connected to humpback health and immunity and could

Uneven frequency of Vibrio alginolyticus-group isolates among different populations of Galápagos marine iguana (Amblyrhynchus cristatus).

Science.gov (United States)

Thaller, Maria C; Ciambotta, Marco; Sapochetti, Manuela; Migliore, Luciana; Tapia, Whashington; Cedeño, Virna; Gentile, Gabriele

2010-02-01

The presence of Vibrio isolates was investigated in cloacal swabs from the Galápagos marine iguana (Amblyrhyncus cristatus). Such unique iguana is endemic to the Galápagos Archipelago, it is listed as vulnerable in the IUCN Red List (2009), and is strictly protected by CITES and Ecuador laws. Our results revealed an uneven isolation frequency of vibrios from animals living in different settings: maximal among the Santa Fe population, scarce at Bahía Tortuga but practically absent in the samples from Puerto Ayora and Plaza Sur. A 16S sequencing confirmed that the isolates belonged to the genus Vibrio, placing them within the V. alginolyticus group; the biochemical identification was, indeed, consistent with V. alginolyticus features. The reason of the observed discrepancy is not clear, but could be either linked to a higher pollution in the inhabited or more touristic places or to differential influence of chemical and physical parameters at a local scale. As V. alginolyticus is an opportunistic pathogen for man and it is known to cause disease in sea-living animals, the ability of these vibrios to enter and persist to a certain extent in the marine iguana gut should be regarded as a risk for health of both the animals and the human personnel involved in monitoring activities. © 2010 Society for Applied Microbiology and Blackwell Publishing Ltd.

Differentiating littering, urban runoff and marine transport as sources of marine debris in coastal and estuarine environments

Science.gov (United States)

Willis, Kathryn; Denise Hardesty, Britta; Kriwoken, Lorne; Wilcox, Chris

2017-03-01

Marine debris is a burgeoning global issue with economic, ecological and aesthetic impacts. While there are many studies now addressing this topic, the influence of urbanisation factors such as local population density, stormwater drains and roads on the distribution of coastal litter remains poorly understood. To address this knowledge gap, we carried out standardized surveys at 224 transect surveys at 67 sites in two estuaries and along the open coast in Tasmania, Australia. We explored the relative support for three hypotheses regarding the sources of the debris; direct deposition by beachgoers, transport from surrounding areas via storm water drains and coastal runoff, and onshore transport from the marine system. We found strong support for all three mechanisms, however, onshore transport from the marine reservoir was the most important mechanism. Overall, the three models together explained 45.8 percent of the variation in our observations. Our results also suggest that most debris released into the marine environment is deposited locally, which may be the answer to where all the missing plastic is in the ocean. Furthermore, local interventions are likely to be most effective in reducing land-based inputs into the ocean.

Shared Physiological and Molecular Responses in Marine Fish and Invertebrates to Environmental Hypoxia: Potential Biomarkers of Adverse Impacts on Marine Communities

Science.gov (United States)

Thomas, P.; Rahman, S.

2016-02-01

Knowledge of the effects of environmental exposure to hypoxia (dissolved oxygen: reproduction, growth and metabolism in both fish and invertebrates is essential for accurate predictions of its chronic impacts on marine communities. Marked disruption of reproduction and its endocrine control was observed in Atlantic croaker collected from the hypoxic region in the northern Gulf of Mexico. Recent research has shown that growth and its physiological upregulation is also impaired in hypoxia-exposed marine fish. Expression of insulin-like growth factor (IGF) binding protein (IGFBP), which inhibits growth, was increased in croaker livers, whereas plasma levels of IGF, the primary regulator of growth, were decreased in snapper after hypoxia exposure. In addition, hypoxia inducible factor-1 (HIF-1), which regulates changes in metabolism during adaptation to hypoxia, was upregulated in croaker collected from hypoxic environments. Interestingly, similar changes in the expression of IGFBP and HIF-1 have been found in marine crustaceans after hypoxia exposure, suggesting these responses to hypoxia are common to marine fish and invertebrates. Preliminary field studies indicate that hypoxia exposure also causes epigenetic modifications, including increases in global DNA methylation, and that these epigenetic changes can influence reproduction and growth in croaker. Epigenetic modifications can be passed to offspring and persist in future generations no longer exposed to an environmental stressor further aggravating its long-term adverse impacts on population abundance and delaying recovery. The growing availability of complete invertebrate genomes and high-throughput DNA sequencing indicates similar epigenetic studies can now be conducted with marine invertebrates. Collectively, the results indicate that environmental hypoxia exposure disrupts major physiological functions in fish and invertebrates critical for maintenance of their populations.

Toxicology of Marine Mammals: New Developments and Opportunities.

Science.gov (United States)

Weijs, Liesbeth; Zaccaroni, Annalisa

2016-01-01

It is widely recognized that marine mammals are exposed to a wide variety of pollutants, with a weight of evidence indicating impacts on their health. Since hundreds of new chemicals enter the global market every year,the methods, approaches and technologies used to characterize pollution levels or impacts are also in a constant state of flux. However, legal and ethical constraints often limit the type and extent of toxicological research being carried out in marine mammals. Nevertheless, new and emerging in vivo, in vitro as well as in silico research opportunities abound in the field of marine mammal toxicology. In the application of findings to population-, species-, or habitat-related risk assessments, the identification of causal relationships which inform source apportionment is important. This, in turn, is informed by a comprehensive understanding of contaminant classes, profiles and fate overspace and time. Such considerations figure prominently in the design and interpretation of marine mammal (eco)-toxicology research. This mini-review attempts to follow the evolution behind marine mammal toxicology until now,highlight some of the research that has been done and suggest opportunities for future research. This Special Issue will showcase new developments in marine mammal toxicology, approaches for exposure-effect research in risk assessment as well as future opportunities.

AFSC/REFM: Alaskan flatfish chronology Black et al

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Annual growth increment patterns observed in the hard parts of many marine organisms are often related to factors in the physical environment, and investigators are...

Genome-Wide DNA Methylation Profiling Reveals Epigenetic Adaptation of Stickleback to Marine and Freshwater Conditions.

Science.gov (United States)

Artemov, Artem V; Mugue, Nikolai S; Rastorguev, Sergey M; Zhenilo, Svetlana; Mazur, Alexander M; Tsygankova, Svetlana V; Boulygina, Eugenia S; Kaplun, Daria; Nedoluzhko, Artem V; Medvedeva, Yulia A; Prokhortchouk, Egor B

2017-09-01

The three-spined stickleback (Gasterosteus aculeatus) represents a convenient model to study microevolution-adaptation to a freshwater environment. Although genetic adaptations to freshwater environments are well-studied, epigenetic adaptations have attracted little attention. In this work, we investigated the role of DNA methylation in the adaptation of the marine stickleback population to freshwater conditions. DNA methylation profiling was performed in marine and freshwater populations of sticklebacks, as well as in marine sticklebacks placed into a freshwater environment and freshwater sticklebacks placed into seawater. We showed that the DNA methylation profile after placing a marine stickleback into fresh water partially converged to that of a freshwater stickleback. For six genes including ATP4A ion pump and NELL1, believed to be involved in skeletal ossification, we demonstrated similar changes in DNA methylation in both evolutionary and short-term adaptation. This suggested that an immediate epigenetic response to freshwater conditions can be maintained in freshwater population. Interestingly, we observed enhanced epigenetic plasticity in freshwater sticklebacks that may serve as a compensatory regulatory mechanism for the lack of genetic variation in the freshwater population. For the first time, we demonstrated that genes encoding ion channels KCND3, CACNA1FB, and ATP4A were differentially methylated between the marine and the freshwater populations. Other genes encoding ion channels were previously reported to be under selection in freshwater populations. Nevertheless, the genes that harbor genetic and epigenetic changes were not the same, suggesting that epigenetic adaptation is a complementary mechanism to selection of genetic variants favorable for freshwater environment. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Spatial genetic structure of Long-tailed Ducks (Clangula hyemalis) among Alaskan, Canadian, and Russian breeding populations

Science.gov (United States)

Wilson, Robert E.; Gust, J R; Petersen, Margaret; Talbot, Sandra L.

2016-01-01

Arctic ecosystems are changing at an unprecedented rate. How Arctic species are able to respond to such environmental change is partially dependent on the connections between local and broadly distributed populations. For species like the Long-tailed Duck (Clangula hyemalis), we have limited telemetry and band-recovery information from which to infer population structure and migratory connectivity; however, genetic analyses can offer additional insights. To examine population structure in the Long-tailed Duck, we characterized variation at mtDNA control region and microsatellite loci among four breeding areas in Alaska, Canada, and Russia. We observed significant differences in the variance of mtDNA haplotype frequencies between the Yukon-Kuskokwim Delta (YKD) and the three Arctic locations (Arctic Coastal Plain in Alaska, eastern Siberia, and central Canadian Arctic). However, like most sea duck genetic assessments, our study found no evidence of population structure based on autosomal microsatellite loci. Long-tailed Ducks use multiple wintering areas where pair formation occurs with some populations using both the Pacific and Atlantic Oceans. This situation provides a greater opportunity for admixture across breeding locales, which would likely homogenize the nuclear genome even in the presence of female philopatry. The observed mtDNA differentiation was largely due to the presence of two divergent clades: (A) a clade showing signs of admixture among all breeding locales and (B) a clade primarily composed of YKD samples. We hypothesize that the pattern of mtDNA differentiation reflects some degree of philopatry to the YKD and isolation of two refugial populations with subsequent expansion and admixture. We recommend additional genetic assessments throughout the circumpolar range of Long-tailed Ducks to further quantify aspects of genetic diversity and migratory connectivity in this species.

Population Structure and Growth of the Threatened Pen Shell, Pinna rudis (Linnaeus, 1758 in a Western Mediterranean Marine Protected Area

Directory of Open Access Journals (Sweden)

E. NEBOT COLOMER

2016-11-01

Full Text Available Coastal ecosystems are being extensively degraded by human activities. Benthic, slow-growing and long-lived species are highly vulnerable to these impacts. Marine protected areas might avoid biodiversity losses through habitat protection. The pen shell Pinna rudis is a protected species, but scarce data are available on its ecology and biology. The present study is a comprehensive ecological study encompassing several unknown aspects of the growth and inner record in relation to habitat types, density and size distribution. A total of 418 strip transects were conducted by scuba diving in the Marine Protected Area of Cabrera National Park (39.14° N, 2.96° E, during the summers of 2011, 2012 and 2013. Sampling was conducted across different habitats and depths exploring 152,146.35 m2 in total. Densities varied spatially within the park (from 0 to 6.89 ind./100 m2 corresponding to a wide range of sizes and ages. Most pen shells were patchily distributed and mainly concentrated in caves. Two hotspots with high densities represent the highest densities ever recorded worldwide, showing a possible link to high larval accumulation and settlement. The population size structure showed a unimodal distribution with shell width ranging from 6.2 to 25.0 cm, with an average shell width of 16.0 ± 3.4 cm. The absolute growth was asymptotic, with a maximum age and length of 28-31 years and 45 cm, respectively. This study on the biology and ecology of a well-established population of Pinna rudis in the Western Mediterranean could set a baseline for the conservation of this species in other areas.

Polar marine ecosystems: major threats and future change

Energy Technology Data Exchange (ETDEWEB)

Clarke, A. [British Antarctic Survey, Cambridge (United Kingdom); Harris, C.M. [Environmental Research and Assessment, Grantchester (United Kingdom)

2003-07-01

This review of polar marine ecosystems covers both the Arctic and Antarctic, identifying the major threats and, where possible, predicting their possible state(s) in 2025. Although the two polar regions are similar in their extreme photoperiod, low temperatures, and in being heavily influenced by snow and ice, in almost all other respects they are very different. The Arctic Ocean is a basin surrounded by continental landmasses close to, and influenced by, large populations and industrial activities. In contrast, the Southern Ocean is contiguous with all the other great oceans and surrounds a single land mass; Antarctica is remote from major centres of population and sources of pollution. Marine environments in both Polar Regions have been highly disturbed by fishing activity, but, in terms of pollution, some areas remain among the most pristine in the world. There are, however, both local and global pressures. Over the 2025 time horizon, the greatest concern for the Arctic is probably the ecological implications of climate change, particularly insofar as sea ice extent and duration are likely to be affected. Such changes are not expected to be as pronounced in the Southern Ocean over this time period, and concerns are related more to direct threats from harvesting of marine living resources, and the ability to manage these fisheries sustainably. In both Polar Regions, the capacity of marine ecosystems to withstand the cumulative impact of a number of pressures, including climate change, pollution and overexploitation, acting synergistically is of greatest concern. (author)

Identifying footprints of directional and balancing selection in marine and freshwater three-spined stickleback (Gasterosteus aculeatus) populations.

Science.gov (United States)

Mäkinen, H S; Cano, J M; Merilä, J

2008-08-01

Natural selection is expected to leave an imprint on the neutral polymorphisms at the adjacent genomic regions of a selected gene. While directional selection tends to reduce within-population genetic diversity and increase among-population differentiation, the reverse is expected under balancing selection. To identify targets of natural selection in the three-spined stickleback (Gasterosteus aculeatus) genome, 103 microsatellite and two indel markers including expressed sequence tags (EST) and quantitative trait loci (QTL)-associated loci, were genotyped in four freshwater and three marine populations. The results indicated that a high proportion of loci (14.7%) might be affected by balancing selection and a lower proportion (2.8%) by directional selection. The strongest signatures of directional selection were detected in a microsatellite locus and two indel markers located in the intronic regions of the Eda-gene coding for the number of lateral plates. Yet, other microsatellite loci previously found to be informative in QTL-mapping studies revealed no signatures of selection. Two novel microsatellite loci (Stn12 and Stn90) located in chromosomes I and VIII, respectively, showed signals of directional selection and might be linked to genomic regions containing gene(s) important for adaptive divergence. Although the coverage of the total genomic content was relatively low, the predominance of balancing selection signals is in agreement with the contention that balancing, rather than directional selection is the predominant mode of selection in the wild.

The developing framework of marine ecotoxicology: Pollutants as a variable in marine ecosystems?

Science.gov (United States)

Luoma, Samuel N.

1996-01-01

Marine ecosystems include a subset in which at least some interrelated geochemical, biochemical, physiological, population and community characteristics are changed by pollutants. Moderate contamination is relatively widespread in coastal and estuarine ecosystems, so the subset of ecosystems with at least some processes affected could be relatively large. Pollutant influences have changed and will probably continue to change on time scales of decades. Biological exposures and dose in such ecosystems are species-specific and determined by how the species is exposed to different environmental media and the geochemistry of individual pollutants within those media. Bioaccumulation models offer significant promise for interpreting such exposures. Biological responses to pollutants need to be more directly linked to exposure and dose. At the level of the individual this might be improved by better understanding relationships between tissue concentrations of pollutants and responses to pollutants. Multi-discipline field and laboratory studies combined with advanced understanding of some basic processes have reduced the ambiguities in interpreting a few physiological/organismic responses to pollutants in nature. Recognition of pollutant-induced patterns in population responses could lead to similar advances. A rational framework for ecotoxicology is developing, but its further advance is dependent upon better integration of ecotoxicology with basic marine ecology and biology.

DNA Extraction Protocols for Whole-Genome Sequencing in Marine Organisms.

Science.gov (United States)

Panova, Marina; Aronsson, Henrik; Cameron, R Andrew; Dahl, Peter; Godhe, Anna; Lind, Ulrika; Ortega-Martinez, Olga; Pereyra, Ricardo; Tesson, Sylvie V M; Wrange, Anna-Lisa; Blomberg, Anders; Johannesson, Kerstin

2016-01-01

The marine environment harbors a large proportion of the total biodiversity on this planet, including the majority of the earths' different phyla and classes. Studying the genomes of marine organisms can bring interesting insights into genome evolution. Today, almost all marine organismal groups are understudied with respect to their genomes. One potential reason is that extraction of high-quality DNA in sufficient amounts is challenging for many marine species. This is due to high polysaccharide content, polyphenols and other secondary metabolites that will inhibit downstream DNA library preparations. Consequently, protocols developed for vertebrates and plants do not always perform well for invertebrates and algae. In addition, many marine species have large population sizes and, as a consequence, highly variable genomes. Thus, to facilitate the sequence read assembly process during genome sequencing, it is desirable to obtain enough DNA from a single individual, which is a challenge in many species of invertebrates and algae. Here, we present DNA extraction protocols for seven marine species (four invertebrates, two algae, and a marine yeast), optimized to provide sufficient DNA quality and yield for de novo genome sequencing projects.

Pufferfish mortality associated with novel polar marine toxins in Hawaii

Science.gov (United States)

Work, Thierry M.; Moeller, Perer D. R.; Beauchesne, Kevin R.; Dagenais, Julie; Breeden, Renee; Rameyer, Robert; Walsh, Willliam A.; Abecassis, Melanie; Kobayashi, Donald R.; Conway, Carla M.; Winton, James

2017-01-01

Fish die-offs are important signals in tropical marine ecosystems. In 2010, a mass mortality of pufferfish in Hawaii (USA) was dominated by Arothron hispidus showing aberrant neurological behaviors. Using pathology, toxinology, and field surveys, we implicated a series of novel, polar, marine toxins as a likely cause of this mass mortality. Our findings are striking in that (1) a marine toxin was associated with a kill of a fish species that is itself toxic; (2) we provide a plausible mechanism to explain clinical signs of affected fish; and (3) this epizootic likely depleted puffer populations. Whilst our data are compelling, we did not synthesize the toxin de novo, and we were unable to categorically prove that the polar toxins caused mortality or that they were metabolites of an undefined parent compound. However, our approach does provide a template for marine fish kill investigations associated with marine toxins and inherent limitations of existing methods. Our study also highlights the need for more rapid and cost-effective tools to identify new marine toxins, particularly small, highly polar molecules.

Characterisation of North American Brucella isolates from marine mammals.

Science.gov (United States)

Whatmore, Adrian M; Dawson, Claire; Muchowski, Jakub; Perrett, Lorraine L; Stubberfield, Emma; Koylass, Mark; Foster, Geoffrey; Davison, Nicholas J; Quance, Christine; Sidor, Inga F; Field, Cara L; St Leger, Judy

2017-01-01

Extension of known ecological niches of Brucella has included the description of two novel species from marine mammals. Brucella pinnipedialis is associated predominantly with seals, while two major Brucella ceti clades, most commonly associated with porpoises or dolphins respectively, have been identified. To date there has been limited characterisation of Brucella isolates obtained from marine mammals outside Northern European waters, including North American waters. To address this gap, and extend knowledge of the global population structure and host associations of these Brucella species, 61 isolates from marine mammals inhabiting North American waters were subject to molecular and phenotypic characterisation enabling comparison with existing European isolates. The majority of isolates represent genotypes previously described in Europe although novel genotypes were identified in both B. ceti clades. Harp seals were found to carry B. pinnipedialis genotypes previously confined to hooded seals among a diverse repertoire of sequence types (STs) associated with this species. For the first time Brucella isolates were characterised from beluga whales and found to represent a number of distinct B. pinnipedialis genotypes. In addition the known host range of ST27 was extended with the identification of this ST from California sea lion samples. Finally the performance of the frequently used diagnostic tool Bruce-ladder, in differentiating B. ceti and B. pinnipedialis, was critically assessed based on improved knowledge of the global population structure of Brucella associated with marine mammals.

DNA Barcoding of Marine Metazoa

Science.gov (United States)

Bucklin, Ann; Steinke, Dirk; Blanco-Bercial, Leocadio

2011-01-01

More than 230,000 known species representing 31 metazoan phyla populate the world's oceans. Perhaps another 1,000,000 or more species remain to be discovered. There is reason for concern that species extinctions may outpace discovery, especially in diverse and endangered marine habitats such as coral reefs. DNA barcodes (i.e., short DNA sequences for species recognition and discrimination) are useful tools to accelerate species-level analysis of marine biodiversity and to facilitate conservation efforts. This review focuses on the usual barcode region for metazoans: a ˜648 base-pair region of the mitochondrial cytochrome c oxidase subunit I (COI) gene. Barcodes have also been used for population genetic and phylogeographic analysis, identification of prey in gut contents, detection of invasive species, forensics, and seafood safety. More controversially, barcodes have been used to delimit species boundaries, reveal cryptic species, and discover new species. Emerging frontiers are the use of barcodes for rapid and increasingly automated biodiversity assessment by high-throughput sequencing, including environmental barcoding and the use of barcodes to detect species for which formal identification or scientific naming may never be possible.

Practical management of cumulative anthropogenic impacts with working marine examples.

Science.gov (United States)

Wright, Andrew J; Kyhn, Line A

2015-04-01

Human pressure on the environment is expanding and intensifying, especially in coastal and offshore areas. Major contributors to this are the current push for offshore renewable energy sources, which are thought of as environmentally friendly sources of power, as well as the continued demand for petroleum. Human disturbances, including the noise almost ubiquitously associated with human activity, are likely to increase the incidence, magnitude, and duration of adverse effects on marine life, including stress responses. Stress responses have the potential to induce fitness consequences for individuals, which add to more obvious directed takes (e.g., hunting or fishing) to increase the overall population-level impact. To meet the requirements of marine spatial planning and ecosystem-based management, many efforts are ongoing to quantify the cumulative impacts of all human actions on marine species or populations. Meanwhile, regulators face the challenge of managing these accumulating and interacting impacts with limited scientific guidance. We believe there is scientific support for capping the level of impact for (at a minimum) populations in decline or with unknown statuses. This cap on impact can be facilitated through implementation of regular application cycles for project authorization or improved programmatic and aggregated impact assessments that simultaneously consider multiple projects. Cross-company collaborations and a better incorporation of uncertainty into decision making could also help limit, if not reduce, cumulative impacts of multiple human activities. These simple management steps may also form the basis of a rudimentary form of marine spatial planning and could be used in support of future ecosystem-based management efforts. © 2014 Society for Conservation Biology.

Using Expert Elicitation to Estimate the Impacts of Plastic Pollution on Marine Wildlife

Science.gov (United States)

Mallos, N. J.; Wilcox, C.; Leonard, G. H.; Rodriquez, A. G.; Hardesty, B. D.

2016-02-01

With the rapid increase in global plastics production and the resulting large volume of litter that enters the marine environment, determining the consequences of this debris on marine fauna and ocean health has now become a critical environmental priority, particularly for threatened and endangered species. However, there are limited data about the impacts on debris on marine species from which to draw conclusions about the population consequences of anthropogenic debris. To address this knowledge gap, information was elicited from experts on the ecological threat of entanglement, ingestion and chemical contamination for three major marine taxa: seabirds, sea turtles and marine mammals. The threat assessment focused on the most common types of litter that are found along the world's coastlines, based on data gathered during three decades of international coastal clean-up efforts. Fishing related gear, balloons and plastic bags were estimated to pose the greatest entanglement risk to marine fauna. In contrast, experts identified a broader suite of items of concern for ingestion, with plastic bags and plastic utensils ranked as the greatest threats. Entanglement and ingestion affected a similar range of taxa, although entanglement was slightly worse as it is more likely to be lethal. Contamination was scored the lowest in terms of its impact, affecting a smaller portion of the taxa and being rated as having solely non-lethal impacts. Research designed to better understand and quantify the impacts of chemical contamination on marine fauna at individual, population and species levels should be a priority for conservation biologists. This work points towards a number of opportunities for both policy-based and consumer-driven changes in plastics use that could have demonstrable affects for a range of taxa that are ecologically important and serve as indicators of marine ecosystem health. Based on threat rankings, entanglement and ingestion should be a similar priority

Density and distribution of Patella ferruginea in a Marine Protected Area (western Sardinia, Italy: Constraint analysis for population conservation

Directory of Open Access Journals (Sweden)

S. COPPA

2012-04-01

Full Text Available The endemic limpet Patella ferruginea is the most endangered invertebrate of the Mediterranean Sea. Our study examined a population of P. ferruginea in the Marine Protected Area of Penisola del Sinis - Isola di Mal di Ventre (western Sardinia, Italy. During the summer 2009, we carried out a systematic census of P. ferruginea along a 8114 m georeferenced perimeter of coast in the no take-no entry zone to assess its density, spatial distribution, and morphometric characteristics. Our aim was to provide a detailed map of the distribution of P. ferruginea and to investigate the effects of accessibility, wave exposure and slope of the coast on its occurrence. Patella ferrugineashowed the lowest mean density ever reported (0.02 ind/m and a unimodal population structure characterised by fewer females and juveniles. Accessibility had a major negative effect on the occurrence of P. ferruginea. Exposure was also an important factor in influencing its density, size composition and specimen position within the mesolittoral, while the slope had little influence. Morphometric analysis showed the dominance of the Rouxi form, while the Lamarcki form was confined to exposed sites. Our results demonstrate a highly endangered population of P. ferruginea and suggest that human pressure represents the main risk factor.

Haemosporidian parasite infections in grouse and ptarmigan: Prevalence and genetic diversity of blood parasites in resident Alaskan birds

Science.gov (United States)

Smith, Matthew M.; Van Hemert, Caroline R.; Merizon, Richard

2016-01-01

Projections related to future climate warming indicate the potential for an increase in the distribution and prevalence of blood parasites in northern regions. However, baseline data are lacking for resident avian host species in Alaska. Grouse and ptarmigan occupy a diverse range of habitat types throughout the northern hemisphere and are among the most well-known and important native game birds in North America. Information regarding the prevalence and diversity of haemosporidian parasites in tetraonid species is limited, with few recent studies and an almost complete lack of genetic data. To better understand the genetic diversity of haemosporidian parasites in Alaskan tetraonids and to determine current patterns of geographic range and host specificity, we used molecular methods to screen 459 tissue samples collected from grouse and ptarmigan species across multiple regions of Alaska for infection by Leucocytozoon, Haemoproteus, and Plasmodium blood parasites. Infections were detected in 342 individuals, with overall apparent prevalence of 53% for Leucocytozoon, 21% for Haemoproteus, and 9% for Plasmodium. Parasite prevalence varied by region, with different patterns observed between species groups (grouse versus ptarmigan). Leucocytozoon was more common in ptarmigan, whereas Haemoproteus was more common in grouse. We detected Plasmodium infections in grouse only. Analysis of haemosporidian mitochondrial DNA cytochrome b sequences revealed 23 unique parasite haplotypes, several of which were identical to lineages previously detected in other avian hosts. Phylogenetic analysis showed close relationships between haplotypes from our study and those identified in Alaskan waterfowl for Haemoproteus and Plasmodium parasites. In contrast, Leucocytozoon lineages were structured strongly by host family. Our results provide some of the first genetic data for haemosporidians in grouse and ptarmigan species, and provide an initial baseline on the prevalence and diversity

Hypoxia in the changing marine environment

Science.gov (United States)

Zhang, J.; Cowie, G.; Naqvi, S. W. A.

2013-03-01

The predicted future of the global marine environment, as a combined result of forcing due to climate change (e.g. warming and acidification) and other anthropogenic perturbation (e.g. eutrophication), presents a challenge to the sustainability of ecosystems from tropics to high latitudes. Among the various associated phenomena of ecosystem deterioration, hypoxia can cause serious problems in coastal areas as well as oxygen minimum zones in the open ocean (Diaz and Rosenberg 2008 Science 321 926-9, Stramma et al 2008 Science 320 655-8). The negative impacts of hypoxia include changes in populations of marine organisms, such as large-scale mortality and behavioral responses, as well as variations of species distributions, biodiversity, physiological stress, and other sub-lethal effects (e.g. growth and reproduction). Social and economic activities that are related to services provided by the marine ecosystems, such as tourism and fisheries, can be negatively affected by the aesthetic outcomes as well as perceived or real impacts on seafood quality (STAP 2011 (Washington, DC: Global Environment Facility) p 88). Moreover, low oxygen concentration in marine waters can have considerable feedbacks to other compartments of the Earth system, like the emission of greenhouse gases to the atmosphere, and can affect the global biogeochemical cycles of nutrients and trace elements. It is of critical importance to prediction and adaptation strategies that the key processes of hypoxia in marine environments be precisely determined and understood (cf Zhang et al 2010 Biogeosciences 7 1-24).

Patterns and persistence of larval retention and connectivity in a marine fish metapopulation

KAUST Repository

Saenz Agudelo, Pablo; Jones, Geoffrey P.; Thorrold, Simon R.; Planes, Serge

2012-01-01

Connectivity, the demographic linking of local populations through the dispersal of individuals, is one of the most poorly understood processes in population dynamics, yet has profound implications for conservation and harvest strategies. For marine

Design and implementation of a marine animal alert system to support Marine Renewable Energy

Energy Technology Data Exchange (ETDEWEB)

Deng, Zhiqun; Carlson, Thomas J.; Fu, Tao; Ren, Huiying; Martinez, Jayson J.; Myers, Joshua R.; Matzner, Shari; Choi, Eric Y.; Copping, Andrea E.

2013-08-08

Power extracted from fast moving tidal currents has been identified as a potential commercial-scale source of renewable energy. Device developers and utilities are pursuing deployment of prototype tidal turbines to assess technology viability, site feasibility, and environmental interactions. Deployment of prototype turbines requires permits from a range of regulatory authorities. Ensuring the safety of marine animals, particularly those under protection of the Endangered Species Act of 1973 (ESA) and the Marine Mammal Protection Act of 1972 has emerged as a key regulatory challenge for initial MHK deployments. The greatest perceived risk to marine animals is from strike by the rotating blades of tidal turbines. Development of the marine mammal alert system (MAAS) was undertaken to support monitoring and mitigation requirements for tidal turbine deployments. The prototype system development focused on Southern Resident killer whales (SRKW), an endangered population of killer whales that frequents Puget Sound and is intermittently present in the part of the sound where deployment of prototype tidal turbines is being considered. Passive acoustics were selected as the primary means because of the vocal nature of these animals. The MAAS passive acoustic system consists of two-stage process involving the use of an energy detector and a spectrogram-based classifier to distinguish between SKRW’s calls and noise. A prototype consisting of two 2D symmetrical star arrays separated by 20 m center to center was built and evaluated in the waters of Sequim Bay using whale call playback.

Large-scale climatic anomalies affect marine predator foraging behaviour and demography

Science.gov (United States)

Bost, Charles A.; Cotté, Cedric; Terray, Pascal; Barbraud, Christophe; Bon, Cécile; Delord, Karine; Gimenez, Olivier; Handrich, Yves; Naito, Yasuhiko; Guinet, Christophe; Weimerskirch, Henri

2015-10-01

Determining the links between the behavioural and population responses of wild species to environmental variations is critical for understanding the impact of climate variability on ecosystems. Using long-term data sets, we show how large-scale climatic anomalies in the Southern Hemisphere affect the foraging behaviour and population dynamics of a key marine predator, the king penguin. When large-scale subtropical dipole events occur simultaneously in both subtropical Southern Indian and Atlantic Oceans, they generate tropical anomalies that shift the foraging zone southward. Consequently the distances that penguins foraged from the colony and their feeding depths increased and the population size decreased. This represents an example of a robust and fast impact of large-scale climatic anomalies affecting a marine predator through changes in its at-sea behaviour and demography, despite lack of information on prey availability. Our results highlight a possible behavioural mechanism through which climate variability may affect population processes.

Ecological and evolutionary influences on body size and shape in the Galápagos marine iguana (Amblyrhynchus cristatus).

Science.gov (United States)

Chiari, Ylenia; Glaberman, Scott; Tarroso, Pedro; Caccone, Adalgisa; Claude, Julien

2016-07-01

Oceanic islands are often inhabited by endemic species that have undergone substantial morphological evolutionary change due to processes of multiple colonizations from various source populations, dispersal, and local adaptation. Galápagos marine iguanas are an example of an island endemic exhibiting high morphological diversity, including substantial body size variation among populations and sexes, but the causes and magnitude of this variation are not well understood. We obtained morphological measurements from marine iguanas throughout their distribution range. These data were combined with genetic and local environmental data from each population to investigate the effects of evolutionary history and environmental conditions on body size and shape variation and sexual dimorphism. Our results indicate that body size and shape are highly variable among populations. Sea surface temperature and island perimeter, but not evolutionary history as depicted by phylogeographic patterns in this species, explain variation in body size among populations. Conversely, evolutionary history, but not environmental parameters or island size, was found to influence variation in body shape among populations. Finally, in all populations except one, we found strong sexual dimorphism in body size and shape in which males are larger, with higher heads than females, while females have longer heads than males. Differences among populations suggest that plasticity and/or genetic adaptation may shape body size and shape variation in marine iguanas. This study will help target future investigations to address the contribution of plasticity versus genetic adaptation on size and shape variation in marine iguanas.

Wastewater treatment in relation to marine disposal

DEFF Research Database (Denmark)

Harremoës, Poul

2002-01-01

, the water is not lost (non-consumptive uses); but it is heavily polluted. Water treatment can be interpreted as the means by which to purify the water from any degree of impurity to any degree of purity that fits the desired use. Marine discharge may violate quality required for use of the marine waters......The water resource is under increasing pressure, both from the increase in population and from rising living standards. In some parts of the world with a scarce resource, the issue is the loss of water, either by evaporation or by discharge to the sea (consumptive uses). But for most urban use...

Associations between marine food consumption and plasma concentrations of POPs in a Norwegian coastal population.

Science.gov (United States)

Rylander, Charlotta; Sandanger, Torkjel Manning; Brustad, Magritt

2009-02-01

There are strong indications that a moderate intake of fatty fish decreases the risk of cardiovascular diseases due to its content of omega-3 fatty acids. Other studies indicate that fatty fish consumption increase the body burden of Persistent Organic Pollutants (POPs) and may thereby increase the risk of negative health effects. Many of the latter studies are based on POP analysis of fatty fish, from which a recommended daily intake for humans has been calculated based on the no-observed adverse effect level (NOAEL) obtained from animal studies. Studies investigating associations between human plasma concentrations of POPs and intake of marine food show deviating results. In this study we investigated associations between self-reported intake of marine food (fatty fish, fish liver, fish liver oil, seagull eggs and halibut) and plasma concentrations of POPs. The study group consisted of 44 women and 16 men from northern Norway with a marine based diet. In addition to donate blood samples, the participants answered a detailed food frequency questionnaire with special emphasis on marine food consumption. Concentrations of 25 different POPs were measured in plasma. PCB 153 and p'p-DDE were the most ubiquitous PCB and chlorinated pesticide and the geometric mean concentrations were 73 ng/g lipids and 116 ng/g lipids respectively. The main findings in this study were that age, gender and intake of fresh fish liver oil were significant predictors of three of the most common PCBs and trans-Nonachlor in this study group. In addition, intake of seagull eggs influenced the concentration of PCB 180. However, even though the participants had a high intake of marine food they did not have elevated levels of POPs compared to other study groups. Intake of fatty fish did not significantly affect the body burden of POPs in this study group.

A review of methodology for studying the transfer of radionuclides in marine foodchains

International Nuclear Information System (INIS)

Cross, F.A.; Renfro, W.C.; Gilat, E.

1975-01-01

Understanding the mechanisms by which radionuclides are cycled within marine foodchains is essential for predicting concentrations in harvestable seafoods, evaluating the role of organisms in redistributing radionuclides, and assessing radiation doses to populations. Because of the complex interactions within marine foodchains, detailed radioecological studies in contaminated natural ecosystems and carefully designed, long-term laboratory studies on experimental foodchains are both necessary. The report discusses some of the methodological problems involved in conducting field and laboratory studies on radionuclide transfer in marine foodchains. (author)

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic

Science.gov (United States)

Gustine, David D.; Brinkman, Todd J.; Lindgren, Michael A.; Schmidt, Jennifer I.; Rupp, T. Scott; Adams, Layne G.

2014-01-01

Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus) are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs), and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old) across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (−21%) than the Central Arctic herd that wintered primarily in the arctic tundra (−11%). Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic.

Directory of Open Access Journals (Sweden)

David D Gustine

Full Text Available Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs, and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (-21% than the Central Arctic herd that wintered primarily in the arctic tundra (-11%. Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic.

Science.gov (United States)

Gustine, David D; Brinkman, Todd J; Lindgren, Michael A; Schmidt, Jennifer I; Rupp, T Scott; Adams, Layne G

2014-01-01

Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus) are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs), and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old) across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (-21%) than the Central Arctic herd that wintered primarily in the arctic tundra (-11%). Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Marine biology

International Nuclear Information System (INIS)

Thurman, H.V.; Webber, H.H.

1984-01-01

This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the nature of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index

Marine mammals as sentinel species for oceans and human health.

Science.gov (United States)

Bossart, G D

2011-05-01

The long-term consequences of climate change and potential environmental degradation are likely to include aspects of disease emergence in marine plants and animals. In turn, these emerging diseases may have epizootic potential, zoonotic implications, and a complex pathogenesis involving other cofactors such as anthropogenic contaminant burden, genetics, and immunologic dysfunction. The concept of marine sentinel organisms provides one approach to evaluating aquatic ecosystem health. Such sentinels are barometers for current or potential negative impacts on individual- and population-level animal health. In turn, using marine sentinels permits better characterization and management of impacts that ultimately affect animal and human health associated with the oceans. Marine mammals are prime sentinel species because many species have long life spans, are long-term coastal residents, feed at a high trophic level, and have unique fat stores that can serve as depots for anthropogenic toxins. Marine mammals may be exposed to environmental stressors such as chemical pollutants, harmful algal biotoxins, and emerging or resurging pathogens. Since many marine mammal species share the coastal environment with humans and consume the same food, they also may serve as effective sentinels for public health problems. Finally, marine mammals are charismatic megafauna that typically stimulate an exaggerated human behavioral response and are thus more likely to be observed.

Characterisation of North American Brucella isolates from marine mammals.

Directory of Open Access Journals (Sweden)

Adrian M Whatmore

Full Text Available Extension of known ecological niches of Brucella has included the description of two novel species from marine mammals. Brucella pinnipedialis is associated predominantly with seals, while two major Brucella ceti clades, most commonly associated with porpoises or dolphins respectively, have been identified. To date there has been limited characterisation of Brucella isolates obtained from marine mammals outside Northern European waters, including North American waters. To address this gap, and extend knowledge of the global population structure and host associations of these Brucella species, 61 isolates from marine mammals inhabiting North American waters were subject to molecular and phenotypic characterisation enabling comparison with existing European isolates. The majority of isolates represent genotypes previously described in Europe although novel genotypes were identified in both B. ceti clades. Harp seals were found to carry B. pinnipedialis genotypes previously confined to hooded seals among a diverse repertoire of sequence types (STs associated with this species. For the first time Brucella isolates were characterised from beluga whales and found to represent a number of distinct B. pinnipedialis genotypes. In addition the known host range of ST27 was extended with the identification of this ST from California sea lion samples. Finally the performance of the frequently used diagnostic tool Bruce-ladder, in differentiating B. ceti and B. pinnipedialis, was critically assessed based on improved knowledge of the global population structure of Brucella associated with marine mammals.

77 FR 14736 - Takes of Marine Mammals Incidental to Specified Activities; Pile Placement for Fishermen's...

Science.gov (United States)

2012-03-13

... animal, carcass with moderate to advanced decomposition, or scavenger damage), Fishermen's would report... animals. Population trends for all U.S. stocks of harbor porpoises are currently unknown. Gulf of Maine... earthquakes, and animals are natural sound sources throughout the marine environment. Marine mammals produce...

Designing connected marine reserves in the face of global warming.

Science.gov (United States)

Álvarez-Romero, Jorge G; Munguía-Vega, Adrián; Beger, Maria; Del Mar Mancha-Cisneros, Maria; Suárez-Castillo, Alvin N; Gurney, Georgina G; Pressey, Robert L; Gerber, Leah R; Morzaria-Luna, Hem Nalini; Reyes-Bonilla, Héctor; Adams, Vanessa M; Kolb, Melanie; Graham, Erin M; VanDerWal, Jeremy; Castillo-López, Alejandro; Hinojosa-Arango, Gustavo; Petatán-Ramírez, David; Moreno-Baez, Marcia; Godínez-Reyes, Carlos R; Torre, Jorge

2018-02-01

Marine reserves are widely used to protect species important for conservation and fisheries and to help maintain ecological processes that sustain their populations, including recruitment and dispersal. Achieving these goals requires well-connected networks of marine reserves that maximize larval connectivity, thus allowing exchanges between populations and recolonization after local disturbances. However, global warming can disrupt connectivity by shortening potential dispersal pathways through changes in larval physiology. These changes can compromise the performance of marine reserve networks, thus requiring adjusting their design to account for ocean warming. To date, empirical approaches to marine prioritization have not considered larval connectivity as affected by global warming. Here, we develop a framework for designing marine reserve networks that integrates graph theory and changes in larval connectivity due to potential reductions in planktonic larval duration (PLD) associated with ocean warming, given current socioeconomic constraints. Using the Gulf of California as case study, we assess the benefits and costs of adjusting networks to account for connectivity, with and without ocean warming. We compare reserve networks designed to achieve representation of species and ecosystems with networks designed to also maximize connectivity under current and future ocean-warming scenarios. Our results indicate that current larval connectivity could be reduced significantly under ocean warming because of shortened PLDs. Given the potential changes in connectivity, we show that our graph-theoretical approach based on centrality (eigenvector and distance-weighted fragmentation) of habitat patches can help design better-connected marine reserve networks for the future with equivalent costs. We found that maintaining dispersal connectivity incidentally through representation-only reserve design is unlikely, particularly in regions with strong asymmetric patterns of

Assessing uncertainty and risk in exploited marine populations

International Nuclear Information System (INIS)

Fogarty, M.J.; Mayo, R.K.; O'Brien, L.; Serchuk, F.M.; Rosenberg, A.A.

1996-01-01

The assessment and management of exploited fish and invertebrate populations is subject to several types of uncertainty. This uncertainty translates into risk to the population in the development and implementation of fishery management advice. Here, we define risk as the probability that exploitation rates will exceed a threshold level where long term sustainability of the stock is threatened. We distinguish among several sources of error or uncertainty due to (a) stochasticity in demographic rates and processes, particularly in survival rates during the early fife stages; (b) measurement error resulting from sampling variation in the determination of population parameters or in model estimation; and (c) the lack of complete information on population and ecosystem dynamics. The first represents a form of aleatory uncertainty while the latter two factors represent forms of epistemic uncertainty. To illustrate these points, we evaluate the recent status of the Georges Bank cod stock in a risk assessment framework. Short term stochastic projections are made accounting for uncertainty in population size and for random variability in the number of young surviving to enter the fishery. We show that recent declines in this cod stock can be attributed to exploitation rates that have substantially exceeded sustainable levels

The role of individual variation in marine larval dispersal

KAUST Repository

Nanninga, Gerrit B.

2014-12-08

The exchange of individuals among patchy habitats plays a central role in spatial ecology and metapopulation dynamics. Dispersal is frequently observed to vary non-randomly within populations (e.g., short vs. long), indicating that variability among individuals may shape heterogeneity in patterns of connectivity. The concept of context- and condition-dependent dispersal describes the balance between the costs and benefits of dispersal that arises from the interaction of temporal and spatial landscape heterogeneity (the context) with phenotypic variability among individuals (the condition). While this hypothesis is widely accepted in terrestrial theory, it remains questionable to what extent the concept of adaptive dispersal strategies may apply to marine larval dispersal, a process that is largely determined by stochastic forces. Yet, larvae of many taxa exhibit strong navigational capabilities and there is mounting evidence of widespread intra-specific variability in biological traits that are potentially correlated with dispersal potential. While so far there are few known examples of real larval dispersal polymorphisms, intra-specifically variable dispersal strategies may be common in marine systems. Whether adaptive or not, it is becoming apparent that inter-individual heterogeneity in morphology, behavior, condition, and life history traits may have critical effects on population-level heterogeneity in dispersal. Here, we explore the eco-evolutionary causes and consequences of intrinsic and extrinsic variability on larval dispersal by synthesizing the existing literature and drawing conceptual parallels from terrestrial theory. We emphasize the potential importance of larval dispersal polymorphisms in marine population dynamics.

Capacity shortfalls hinder the performance of marine protected areas globally

Science.gov (United States)

Gill, David A.; Mascia, Michael B.; Ahmadia, Gabby N.; Glew, Louise; Lester, Sarah E.; Barnes, Megan; Craigie, Ian; Darling, Emily S.; Free, Christopher M.; Geldmann, Jonas; Holst, Susie; Jensen, Olaf P.; White, Alan T.; Basurto, Xavier; Coad, Lauren; Gates, Ruth D.; Guannel, Greg; Mumby, Peter J.; Thomas, Hannah; Whitmee, Sarah; Woodley, Stephen; Fox, Helen E.

2017-03-01

Marine protected areas (MPAs) are increasingly being used globally to conserve marine resources. However, whether many MPAs are being effectively and equitably managed, and how MPA management influences substantive outcomes remain unknown. We developed a global database of management and fish population data (433 and 218 MPAs, respectively) to assess: MPA management processes; the effects of MPAs on fish populations; and relationships between management processes and ecological effects. Here we report that many MPAs failed to meet thresholds for effective and equitable management processes, with widespread shortfalls in staff and financial resources. Although 71% of MPAs positively influenced fish populations, these conservation impacts were highly variable. Staff and budget capacity were the strongest predictors of conservation impact: MPAs with adequate staff capacity had ecological effects 2.9 times greater than MPAs with inadequate capacity. Thus, continued global expansion of MPAs without adequate investment in human and financial capacity is likely to lead to sub-optimal conservation outcomes.

Evaluation of radionuclide levels and radiological dose in three populations of marine mammals in the eastern Canadian Arctic

International Nuclear Information System (INIS)

Macdonald, C.R.; Ewing, L.L.; Wiewel, A.M.; Harris, D.A.; Stewart, R.E.A.

1993-01-01

Radionuclide levels were measured in beluga, walrus and ringed seal populations collected in 1992 to assess radiation dose and changes in dose with age and sex. The authors hypothesized that Arctic marine food chains accumulate high levels of naturally-occurring radionuclides such as polonium-210 and that radiation may pose a stress to animals which also accumulate metals such as cadmium. Liver, kidney, muscle and jawbone were analyzed by gamma spectrometry for cesium-137, cesium-134, lead-210, potassium-40 and radium-226 and fission-derived nuclides. Polonium-210 was analyzed by alpha spec after autodeposition onto a silver disk. Cesium-137 concentrations in muscle in all three populations were low, and ranged from below detection limits to 10 Bq/kg ww. There was no evidence of fission-derived radionuclides such as zinc-65 or cobalt-60. Lead-210 levels ranged from below detection limits in muscle of ringed seal and walrus to a mean of 82.3 Bq/kg ww in walrus bone. Polonium-210 in the three population ranged from 10 to 30 Bq/kg ww in bone and kidney. The major contributor to dose in the animals was polonium-210 because it is an alpha emitter and accumulates to moderate levels in liver and kidney. Radiological dose is approximately 20--30 times higher than background in humans, and is considerably lower than the dose observed in terrestrial food chains in the Arctic

Adaptive Observatories for Observing Moving Marine Organisms (Invited)

Science.gov (United States)

Bellingham, J. G.; Scholin, C.; Zhang, Y.; Godin, M. A.; Hobson, B.; Frolov, S.

2010-12-01

The ability to characterize the response of small marine organisms to each other, and to their environment, is a demanding observational challenge. Small organisms live in a water reference frame, while existing cable or mooring-based observatories operate in an Earth reference frame. Thus repeated observations from a fixed system observe different populations as currents sweep organisms by the sensors. In contrast, mobile systems are typically optimized for spatial coverage rather than repeated observations of the same water volume. Lagrangian drifters track water mass, but are unable to find or reposition themselves relative to ocean features. We are developing a system capable of finding, following and observing discrete populations of marine organisms over time, leveraging a decade and a half investment in the Autonomous Ocean Sampling Network (AOSN) program. AOSN undertook the development of platforms to enable multi-platform coordinated measurement of ocean properties in the late 1990s, leading to the development of a variety of autonomous underwater vehicles (AUVs) and associated technologies, notably several glider systems, now in common use. Efforts by a number of research groups have focused on methods to employ these networked systems to observe and predict dynamic physical ocean phenomena. For example, periodic large scale field programs in Monterey Bay have progressively integrated these systems with data systems, predictive models, and web-based collaborative portals. We are adapting these approaches to follow and observe the dynamics of marine organisms. Compared to physical processes, the temporal and spatial variability of small marine organisms, particularly micro-organisms, is typical greater. Consequently, while multi-platform observations of physical processes can be coordinated via intermittent communications links from shore, biological observations require a higher degree of adaptability of the observation system in situ. This talk will

Passive Acoustic Monitoring of the Environmental Impact of Oil Exploration on Marine Mammals in the Gulf of Mexico.

Science.gov (United States)

Sidorovskaia, Natalia A; Ackleh, Azmy S; Tiemann, Christopher O; Ma, Baoling; Ioup, Juliette W; Ioup, George E

2016-01-01

The Gulf of Mexico is a region densely populated by marine mammals that must adapt to living in a highly active industrial environment. This paper presents a new approach to quantifying the anthropogenic impact on the marine mammal population. The results for sperm and beaked whales of a case study of regional population dynamics trends after the Deepwater Horizon oil spill, derived from passive acoustic-monitoring data gathered before and after the spill in the vicinity of the accident, are presented.

Hypoxia in the changing marine environment

International Nuclear Information System (INIS)

Zhang, J; Cowie, G; Naqvi, S W A

2013-01-01

The predicted future of the global marine environment, as a combined result of forcing due to climate change (e.g. warming and acidification) and other anthropogenic perturbation (e.g. eutrophication), presents a challenge to the sustainability of ecosystems from tropics to high latitudes. Among the various associated phenomena of ecosystem deterioration, hypoxia can cause serious problems in coastal areas as well as oxygen minimum zones in the open ocean (Diaz and Rosenberg 2008 Science 321 926–9, Stramma et al 2008 Science 320 655–8). The negative impacts of hypoxia include changes in populations of marine organisms, such as large-scale mortality and behavioral responses, as well as variations of species distributions, biodiversity, physiological stress, and other sub-lethal effects (e.g. growth and reproduction). Social and economic activities that are related to services provided by the marine ecosystems, such as tourism and fisheries, can be negatively affected by the aesthetic outcomes as well as perceived or real impacts on seafood quality (STAP 2011 (Washington, DC: Global Environment Facility) p 88). Moreover, low oxygen concentration in marine waters can have considerable feedbacks to other compartments of the Earth system, like the emission of greenhouse gases to the atmosphere, and can affect the global biogeochemical cycles of nutrients and trace elements. It is of critical importance to prediction and adaptation strategies that the key processes of hypoxia in marine environments be precisely determined and understood (cf Zhang et al 2010 Biogeosciences 7 1–24). (synthesis and review)

Sources, factors, mechanisms and possible solutions to pollutants in marine ecosystems

International Nuclear Information System (INIS)

Mostofa, Khan M.G.; Liu, Cong-Qiang; Vione, Davide; Gao, Kunshan; Ogawa, Hiroshi

2013-01-01

Algal toxins or red-tide toxins produced during algal blooms are naturally-derived toxic emerging contaminants (ECs) that may kill organisms, including humans, through contaminated fish or seafood. Other ECs produced either naturally or anthropogenically ultimately flow into marine waters. Pharmaceuticals are also an important pollution source, mostly due to overproduction and incorrect disposal. Ship breaking and recycle industries (SBRIs) can also release various pollutants and substantially deteriorate habitats and marine biodiversity. Overfishing is significantly increasing due to the global food crisis, caused by an increasing world population. Organic matter (OM) pollution and global warming (GW) are key factors that exacerbate these challenges (e.g. algal blooms), to which acidification in marine waters should be added as well. Sources, factors, mechanisms and possible remedial measures of these challenges to marine ecosystems are discussed, including their eventual impact on all forms of life including humans. -- Review of sources, factors, mechanisms and possible remedial measures of key pollutants (contaminants, toxins, ship breaking, overfishing) in marine ecosystems

Horizontal gene transfer and mobile genetic elements in marine systems.

Science.gov (United States)

Sobecky, Patricia A; Hazen, Tracy H

2009-01-01

The pool of mobile genetic elements (MGE) in microbial communities consists of viruses, plasmids, and associated elements (insertion sequences, transposons, and integrons) that are either self-transmissible or use mobile plasmids and viruses as vehicles for their dissemination. This mobilome facilitates the horizontal transfer of genes that promote the evolution and adaptation of microbial communities. Efforts to characterize MGEs from microbial populations resident in a variety of ecological habitats have revealed a surprisingly novel and seemingly untapped biodiversity. To better understand the impact of horizontal gene transfer (HGT), as well as the agents that promote HGT in marine ecosystems and to determine whether or not environmental parameters can effect the composition and structure of the mobilome in marine microbial communities, information on the distribution, diversity, and ecological traits of the marine mobilome is presented. In this chapter we discuss recent insights gained from different methodological approaches used to characterize the biodiversity and ecology of MGE in marine environments and their contributions to HGT. In addition, we present case studies that highlight specific HGT examples in coastal, open-ocean, and deep-sea marine ecosystems.

Environmental pollution and population policies.

Science.gov (United States)

1980-04-01

There is a growing recognition in Malaysia of the interrelationship between population growth, population policies, development policies, and environmental pollution. In Malaysia, with a current population of 13,250,000 and an annual growth rate of 2.4%, economic development is leading to large scale deforestation which in turn is altering climatic conditions, reducing water supplies, and increasing erosion. According to estimates 750,000 acres of jungle were cleared in the last 10 years. Industrial wastes and domestic sewage discharged into rivers and lakes is endangering marine life and padilands. This is a serious problem, since 70% of the Malaysian population derives the bulk of their protein intake from marine life. Noise and carbon monoxide pollution in urban areas is increasing due to the 15% annual increase in the number of vehicles in the country. These dangers need to be taken into account as continuing efforts are made to increase industrialization in order to provide jobs for the 350,000 unemployed and underemployed youth in the country. Fortunately, government officials in Malaysia are giving consideration to energy, water and oil conservation in formulating development plans and are becoming increasingly aware that population growth and population policies have a direct impact on development planning and environmental pollution.

The future of the oceans past: towards a global marine historical research initiative.

Science.gov (United States)

Schwerdtner Máñez, Kathleen; Holm, Poul; Blight, Louise; Coll, Marta; MacDiarmid, Alison; Ojaveer, Henn; Poulsen, Bo; Tull, Malcolm

2014-01-01

Historical research is playing an increasingly important role in marine sciences. Historical data are also used in policy making and marine resource management, and have helped to address the issue of shifting baselines for numerous species and ecosystems. Although many important research questions still remain unanswered, tremendous developments in conceptual and methodological approaches are expected to contribute to a comprehensive understanding of the global history of human interactions with life in the seas. Based on our experiences and knowledge from the "History of Marine Animal Populations" project, this paper identifies the emerging research topics for future historical marine research. It elaborates on concepts and tools which are expected to play a major role in answering these questions, and identifies geographical regions which deserve future attention from marine environmental historians and historical ecologists.

Events Calendar: Smithsonian Marine Ecosystems Exhibit: Smithsonian Marine

Science.gov (United States)

current Smithsonian research on the plants and animals of the Indian River Lagoon and marine environments Station (SMS) at Fort Pierce Smithsonian Marine Station at Fort Pierce Website Search Box History Modeling Ecosystems Virtual Tour Facebook Instagram Twitter SMS Home › Smithsonian Marine

Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

DEFF Research Database (Denmark)

Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Meldrup, Dorte

2014-01-01

Recent technological developments have facilitated an increased focus on identifying genomic regions underlying adaptive trait variation in natural populations, and it has been advocated that this information should be important for designating population units for conservation. In marine fishes...... are under selection in natural populations of Atlantic cod. Furthermore, we find that patterns of variation in outlier markers do not align with those observed at selectively neutral markers, and that outlier markers identify conservation units on finer geographical scales than those revealed when analysing...... only neutral markers. Accordingly, results also suggest that information about adaptive genetic variation will be useful for targeted conservation and management in this and other marine species...

Global marine radioactivity database (GLOMARD)

International Nuclear Information System (INIS)

2000-06-01

The GLOMARD stores all available data on marine radioactivity in seawater, suspended matter, sediments and biota. The database provides critical input to the evaluation of the environmental radionuclide levels in regional seas and the world's oceans. It can be used as a basis for the assessment of the radiation doses to local, regional and global human populations and to marine biota. It also provides information on temporal trends of radionuclide levels in the marine environment and identifies gaps in available information. The database contains information on the sources of the data; the laboratories performing radionuclide analysis; the type of samples (seawater, sediment, biota) and associated details (such as volume and weight); the sample treatment, analytical methods, and measuring instruments; and the analysed results (such as radionuclide concentrations, uncertainties, temperature, salinity, etc.). The current version of the GLOMARD allows the input, maintenance and extraction of data for the production of various kinds of maps using external computer programs. Extracted data are processed by these programs to produce contour maps representing radionuclide distributions in studied areas. To date, development work has concentrated on the Barents and Kara Seas in the Arctic and the Sea of Japan in the northwest Pacific Ocean, in connection with the investigation of radioactive waste dumping sites, as well as on marine radioactivity assessment of the Mururoa and Fangataufa nuclear weapons tests sites in French Polynesia. Further data inputs and evaluations are being carried out for the Black and Mediterranean Seas. In the framework of the project on Worldwide Marine Radioactivity Studies, background levels of 3 H, 90 Sr, 137 Cs and 239,240 Pu in water, sediment and biota of the world's oceans and seas will be established

Multi-objective entropy evolutionary algorithm for marine oil spill detection using cosmo-skymed satellite data

OpenAIRE

M. Marghany

2015-01-01

Oil spill pollution has a substantial role in damaging the marine ecosystem. Oil spill that floats on top of water, as well as decreasing the fauna populations, affects the food chain in the ecosystem. In fact, oil spill is reducing the sunlight penetrates the water, limiting the photosynthesis of marine plants and phytoplankton. Moreover, marine mammals for instance, disclosed to oil spills their insulating capacities are reduced, and so making them more v...

Landscape heterogeneity drives intra-population niche variation and reproduction in an arctic top predator.

Science.gov (United States)

L'hérault, Vincent; Franke, Alastair; Lecomte, Nicolas; Alogut, Adam; Bêty, Joël

2013-09-01

While intra-population variability in resource use is ubiquitous, little is known of how this measure of niche diversity varies in space and its role in population dynamics. Here we examined how heterogeneous breeding environments can structure intra-population niche variation in both resource use and reproductive output. We investigated intra-population niche variation in the Arctic tundra ecosystem, studying peregrine falcon (Falco peregrinus tundrius, White) breeding within a terrestrial-marine gradient near Rankin Inlet, Nunavut, Canada. Using stable isotope analysis, we found that intra-population niches varied at the individual level; we examined within-nest and among-nest variation, though only the latter varied along the terrestrial-marine gradient (i.e., increased among-nest variability among birds nesting within the marine environment, indicating higher degree of specialization). Terrestrial prey species (small herbivores and insectivores) were consumed by virtually all falcons. Falcons nesting within the marine environment made use of marine prey (sea birds), but depended heavily on terrestrial prey (up to 90% of the diet). Using 28-years of peregrine falcon nesting data, we found a positive relationship between the proportion of terrestrial habitat surrounding nest sites and annual nestling production, but no relationship with the likelihood of successfully rearing at least one nestling reaching 25 days old. Annually, successful inland breeders raised 0.47 more young on average compared to offshore breeders, which yields potential fitness consequences for this long-living species. The analyses of niche and reproductive success suggest a potential breeding cost for accessing distant terrestrial prey, perhaps due to additional traveling costs, for those individuals with marine nest site locations. Our study indicates how landscape heterogeneity can generate proximate (niche variation) and ultimate (reproduction) consequences on a population of generalist

Linking plastic ingestion research with marine wildlife conservation.

Science.gov (United States)

Avery-Gomm, Stephanie; Borrelle, Stephanie B; Provencher, Jennifer F

2018-05-16

Plastic is an increasingly pervasive marine pollutant. Concomitantly, the number of studies documenting plastic ingestion in wildlife is accelerating. Many of these studies aim to provide a baseline against which future levels of plastic ingestion can be compared, and are motivated by an underlying interest in the conservation of their study species and ecosystems. Although this research has helped to raise the profile of plastic as a pollutant of emerging concern, there is a disconnect between research examining plastic pollution and wildlife conservation. We present ideas to further discussion about how plastic ingestion research could benefit wildlife conservation by prioritising studies that elucidates the significance of plastic pollution as a population-level threat, identifies vulnerable populations, and evaluates strategies for mitigating impacts. The benefit of plastic ingestion research to marine wildlife can be improved by establishing a clearer understanding of how discoveries will be integrated into conservation and policy actions. Copyright © 2018. Published by Elsevier B.V.

Marine genomics

DEFF Research Database (Denmark)

Oliveira Ribeiro, Ângela Maria; Foote, Andrew David; Kupczok, Anne

2017-01-01

Marine ecosystems occupy 71% of the surface of our planet, yet we know little about their diversity. Although the inventory of species is continually increasing, as registered by the Census of Marine Life program, only about 10% of the estimated two million marine species are known. This lag......-throughput sequencing approaches have been helping to improve our knowledge of marine biodiversity, from the rich microbial biota that forms the base of the tree of life to a wealth of plant and animal species. In this review, we present an overview of the applications of genomics to the study of marine life, from...

Global patterns of extinction risk in marine and non-marine systems.

Science.gov (United States)

Webb, Thomas J; Mindel, Beth L

2015-02-16

Despite increasing concern over the effects of human activities on marine ecosystems, extinction in the sea remains scarce: 19-24 out of a total of >850 recorded extinctions implies a 9-fold lower marine extinction rate compared to non-marine systems. The extent of threats faced by marine systems, and their resilience to them, receive considerable attention, but the detectability of marine extinctions is less well understood. Before its extinction or threat status is recorded, a species must be both taxonomically described and then formally assessed; lower rates of either process for marine species could thus impact patterns of extinction risk, especially as species missing from taxonomic inventories may often be more vulnerable than described species. We combine data on taxonomic description with conservation assessments from the International Union for Conservation of Nature (IUCN) to test these possibilities across almost all marine and non-marine eukaryotes. We find that the 9-fold lower rate of recorded extinctions and 4-fold lower rate of ongoing extinction risk across marine species can be explained in part by differences in the proportion of species assessed by the IUCN (3% cf. 4% of non-marine species). Furthermore, once taxonomic knowledge and conservation assessments pass a threshold level, differences in extinction risk between marine and non-marine groups largely disappear. Indeed, across the best-studied taxonomic groups, there is no difference between marine and non-marine systems, with on average between 20% and 25% of species being threatened with extinction, regardless of realm. Copyright © 2015 Elsevier Ltd. All rights reserved.

Effects of Biodiesel Blend on Marine Fuel Characteristics for Marine Vessels

Directory of Open Access Journals (Sweden)

Cherng-Yuan Lin

2013-09-01

Full Text Available Biodiesel produced from vegetable oils, animal fats and algae oil is a renewable, environmentally friendly and clean alternative fuel that reduces pollutants and greenhouse gas emissions in marine applications. This study investigates the influence of biodiesel blend on the characteristics of residual and distillate marine fuels. Adequate correlation equations are applied to calculate the fuel properties of the blended marine fuels with biodiesel. Residual marine fuel RMA has inferior fuel characteristics compared with distillate marine fuel DMA and biodiesel. The flash point of marine fuel RMA could be increased by 20% if blended with 20 vol% biodiesel. The sulfur content of residual marine fuel could meet the requirement of the 2008 MARPOL Annex VI Amendment by blending it with 23.0 vol% biodiesel. In addition, the kinematic viscosity of residual marine fuel could be reduced by 12.9% and the carbon residue by 23.6% if 20 vol% and 25 vol% biodiesel are used, respectively. Residual marine fuel blended with 20 vol% biodiesel decreases its lower heating value by 1.9%. Moreover, the fuel properties of residual marine fuel are found to improve more significantly with biodiesel blending than those of distillate marine fuel.

Marine ecology

International Nuclear Information System (INIS)

Anon.

1977-01-01

Studies on marine ecology included marine pollution; distribution patterns of Pu and Am in the marine waters, sediments, and organisms of Bikini Atoll and the influence of physical, chemical, and biological factors on their movements through marine biogeochemical systems; transfer and dispersion of organic pollutants from an oil refinery through coastal waters; transfer of particulate pollutants, including sediments dispersed during construction of offshore power plants; and raft culture of the mangrove oysters

Marine resource reliance in the human populations of the Atacama Desert, northern Chile - A view from prehistory

Science.gov (United States)

King, Charlotte L.; Millard, Andrew R.; Gröcke, Darren R.; Standen, Vivien G.; Arriaza, Bernardo T.; Halcrow, Siân E.

2018-02-01

The Atacama Desert is one of the most inhospitable terrestrial environments on Earth, yet the upwelling of the Humboldt Current off the coast has resulted in the presence of a rich marine biota. It is this marine environment which first enabled the human settlement of the northern Atacama Desert, and continues to form the basis of regional economies today. In this paper we explore how the desert has shaped human dietary choices throughout prehistory, using carbon and nitrogen isotope analysis of human bone collagen (n = 80) to reconstruct the diets of the inhabitants of the Arica region of the northern Atacama. This area is one of the driest parts of the desert, but has been generally understudied in terms of dietary adaptation. Statistical analysis using FRUITS has allowed deconvolution of isotopic signals to create dietary reconstructions and highlight the continued importance of marine resources throughout the archaeological sequence. Location also appears to have played a role in dietary choices, with inland sites having 10-20% less calories from marine foods than coastal sites. We also highlight evidence for the increasing importance of maize consumption, coinciding with contact with highland polities. In all periods apart from the earliest Archaic, however, there is significant variability between individuals in terms of dietary resource use. We conclude that marine resource use, and broad-spectrum economies persisted throughout prehistory. We interpret these results as reflecting a deliberate choice to retain dietary diversity as a buffer against resource instability.

Regime shifts in demersal assemblages of the Benguela Current Large Marine Ecosystem: a comparative assessment

DEFF Research Database (Denmark)

Kirkman, Stephen P.; Yemane, Dawit; Atkinson, Lara J.

2015-01-01

Using long‐term survey data, changes in demersal faunal communities in the Benguela Current Large Marine Ecosystem were analysed at community and population levels to provide a comparative overview of the occurrence and timing of regime shifts. For South Africa, the timing of a community‐level sh......Using long‐term survey data, changes in demersal faunal communities in the Benguela Current Large Marine Ecosystem were analysed at community and population levels to provide a comparative overview of the occurrence and timing of regime shifts. For South Africa, the timing of a community...

Brief communication: Population variation in human maxillary premolar accessory ridges (MxPAR).

Science.gov (United States)

Burnett, Scott E; Hawkey, Diane E; Turner, Christy G

2010-02-01

The purpose of this brief communication is to report the results of an analysis of maxillary premolar accessory ridges (MxPAR), a common but understudied accessory ridge that may occur both mesial and distal to the central ridge of the buccal cusp of upper premolars. We developed a new five-grade scoring plaque to better categorize MxPAR variation. Subsequently, we conducted a population analysis of MxPAR frequency in 749 dental casts of South African Indian, American Chinese, Alaskan Eskimo, Tohono O'odham (Papago), Akimel O'odham (Pima), Solomon Islander, South African Bantu, and both American and South African Whites. Northeast Asian and Asian-derived populations exhibited the highest MxPAR frequencies while Indo-European samples (South African Indians, American and South African Whites) exhibited relatively low frequencies. The Solomon Islanders and South African Bantu samples exhibited intermediate frequencies. Our analysis indicates that statistically significant differences in MxPAR frequency exist between major geographic populations. As a result, the MxPAR plaque has now been added to the Arizona State University Dental Anthropology System, an important contribution as maxillary premolar traits are underrepresented in analyses of dental morphology. 2009 Wiley-Liss, Inc.

Field-Based Radiographic Imaging of Marine Megafauna: Marine Iguanas (Amblyrhynchus cristatus as a Case Study

Directory of Open Access Journals (Sweden)

Gregory A. Lewbart

2018-02-01

Full Text Available Effective conservation of marine megafauna requires a thorough understanding of the ecology, physiology, population dynamics, and health of vulnerable species. Assessing the health of large, mobile marine animals poses particular challenges, in part because the subjects are difficult to capture and restrain, and in part because standard laboratory and diagnostic tools are difficult to apply in a field setting. Radiography is a critically important diagnostic tool used routinely by veterinarians, but it has seldom been possible to image live marine vertebrates in the field. As a first step toward assessing the feasibility of incorporating radiography into studies of vulnerable species in remote locations, we used portable radiographic equipment to acquire the first digital internal images of living marine iguanas, Amblyrhynchus cristatus, an iconic lizard endemic only to the Galápagos Islands of Ecuador. The radiographic machinery was powered by batteries and performed well on a rocky beach environment of an uninhabited island, despite high heat and humidity. The accuracy of radiographic measurements was validated by computing a snout-vent length (SVL using bone dimensions and comparing this to standard measurements of SVL made externally with a tape measure. These results demonstrate the feasibility of using radiography to study animals in remote sites, a technique that may prove useful for a variety of physiological, ecological, and biomechanical studies in which reliable measurements of skeletal and soft-tissue dimensions must be acquired under challenging field conditions. Refinements are discussed that will help the technology reach its full potential in field studies.

Natural disturbance shapes benthic intertidal macroinvertebrate communities of high latitude river deltas

Science.gov (United States)

Churchwell, Roy T.; Kendall, Steve J.; Blanchard, Amy L.; Dunton, Kenneth H.; Powell, Abby N.

2016-01-01

Unlike lower latitude coastlines, the estuarine nearshore zones of the Alaskan Beaufort Sea are icebound and frozen up to 9 months annually. This annual freezing event represents a dramatic physical disturbance to fauna living within intertidal sediments. The main objectives of this study were to describe the benthic communities of Beaufort Sea deltas, including temporal changes and trophic structure. Understanding benthic invertebrate communities provided a baseline for concurrent research on shorebird foraging ecology at these sites. We found that despite continuous year-to-year episodes of annual freezing, these estuarine deltas are populated by a range of invertebrates that represent both marine and freshwater assemblages. Freshwater organisms like Diptera and Oligochaeta not only survive this extreme event, but a marine invasion of infaunal organisms such as Amphipoda and Polychaeta rapidly recolonizes the delta mudflats following ice ablation. These delta sediments of sand, silt, and clay are fine in structure compared to sediments of other Beaufort Sea coastal intertidal habitats. The relatively depauperate invertebrate community that ultimately develops is composed of marine and freshwater benthic invertebrates. The composition of the infauna also reflects two strategies that make life on Beaufort Sea deltas possible: a migration of marine organisms from deeper lagoons to the intertidal and freshwater biota that survive the 9-month ice-covered period in frozen sediments. Stable isotopic analyses reveal that both infaunal assemblages assimilate marine and terrestrial sources of organic carbon. These results provide some of the first quantitative information on the infaunal food resources of shallow arctic estuarine systems and the long-term persistence of these invertebrate assemblages. Our data help explain the presence of large numbers of shorebirds in these habitats during the brief summer open-water period and their trophic importance to migrating

Annual report of the Marine Mammal Commission, calendar year 1992. Report to the Congress

International Nuclear Information System (INIS)

1993-01-01

This is the 20th Annual Report of the Marine Mammal Commission and its Committee of Scientific Advisors on Marine Mammals. The Commission was established under Title II of the Marine Mammal Protection Act to provide an independent source of guidance on Federal activities and policies, both domestic and international, affecting marine mammal protection and conservation. Each year, the Marine Mammal Commission and its Committee of Scientific Advisors devote particular attention to marine mammal species or populations that are or may be in jeopardy. Chapter III describes efforts to conserve: sea otters in California and Alaska; Steller sea lions; Hawaiian monk seals; harbor seals; northern fur seals; Pacific walruses; northern right whales; humpback whales; gray whales; bowhead whales; harbor porpoises; vaquitas or Gulf of California harbor porpoises; bottlenose dolphins; killer whales; and polar bears. Activities related to West Indian manatees, Hawaiian monk seals, vaquitas, and gray whales are summarized

Stable isotopic techniques to address marine pollution: Karachi coast as a case study

International Nuclear Information System (INIS)

Ahmad, N.; Mashiatullah, A.; Javed, T.; Chaudhary, M.Z.; Fazil, M.; Khan, M.S.; Qureshi, R.M.

2011-01-01

Seawater of the coastal regions near heavily industrialized and thickly populated urbanized centers normally receive large quantities of domestic, agricultural and industrial sewage. Ocean systems generally appear to be unlimited in their ability to dilute these human discharges and industrial wastes. This limit is now being exceeded in coastal waters in the vicinity of many large industrial and heavy populated coastal zones, causing threat to marine coastal resources of these areas. Considering the increasing threats of the unplanned inventory of untreated wastes into the marine coastal environment, the strength of isotope tools (delta/sup 13/C) is used to understand the complex ecological systems in the marine coastal environment. This technique has been applied to study transport, behavior and fate of organic pollutants in marine coastal ecosystems of Karachi coast mainly as model studies. Carbon flow in heavily contaminated harbour channel (Manora Channel) , southeast and northwest coast have been investigated. The results indicate that shallow marine coastal waters tend to be depleted in /sup 13/C (TDIC) where polluted rivers through the coastal dwellings enter and get mixed with the seawater. Gradual increase in /sup 13/C (TDIC) are observed as the distance from pollution source is increased. Extremely depleted /sup 13/C/sub org/ was observed in sediment of Layari river out fall zone and Karachi fish harbor indicating input of domestic sewage through Layari river. Studies have proved that stable carbon isotope ratios of total dissolved inorganic carbon (TDIC) can be used as an effective tracer of sewage discharge and their transport in shallow marine environment. (author)

Environmental Impacts—Marine Ecosystems

DEFF Research Database (Denmark)

Brander, Keith; Ottersen, Geir; Bakker, J.P.

2016-01-01

This chapter presents a review of what is known about the impacts of climate change on the biota (plankton, benthos, fish, seabirds and marine mammals) of the North Sea. Examples show how the changing North Sea environment is affecting biological processes and organisation at all scales, including...... the physiology, reproduction, growth, survival, behaviour and transport of individuals; the distribution, dynamics and evolution of populations; and the trophic structure and coupling of ecosystems. These complex responses can be detected because there are detailed long-term biological and environmental records...

Linking local retention, self-recruitment, and persistence in marine metapopulations

KAUST Repository

Lett, Christophe; Nguyen-Huu, Tri; Cuif, Marion; Saenz Agudelo, Pablo; Kaplan, David M.

2015-01-01

Three indices of larval retention have been used in the literature to assess the tendency for self-maintenance of local marine populations: local retention (LR), self-recruitment (SR), and relative local retention (RLR). Only one of these, LR

Marine pollution

International Nuclear Information System (INIS)

Albaiges, J.

1989-01-01

This book covers the following topics: Transport of marine pollutants; Transformation of pollutants in the marine environment; Biological effects of marine pollutants; Sources and transport of oil pollutants in the Persian Gulf; Trace metals and hydrocarbons in Syrian coastal waters; and Techniques for analysis of trace pollutants

Gendered Disparities in Quality of Cataract Surgery in a Marginalised Population in Pakistan: The Karachi Marine Fishing Communities Eye and General Health Survey.

Directory of Open Access Journals (Sweden)

Khabir Ahmad

Full Text Available Marine fishing communities are among the most marginalised and hard-to-reach groups and have been largely neglected in health research. We examined the quality of cataract surgery and its determinants, with an emphasis on gender, in marine fishing communities in Karachi, Pakistan, using multiple indicators of performance.The Karachi Marine Fishing Communities Eye and General Health Survey was a door-to-door, cross-sectional study conducted between March 2009 and April 2010 in fishing communities living on 7 islands and in coastal areas in Keamari, Karachi, located on the Arabian Sea. A population-based sample of 638 adults, aged ≥ 50 years, was studied. A total of 145 eyes (of 97 persons had undergone cataract surgery in this sample. Cataract surgical outcomes assessed included vision (presenting and best-corrected with a reduced logMAR chart, satisfaction with surgery, astigmatism, and pupil shape. Overall, 65.5% of the operated eyes had some form of visual loss (presenting visual acuity [PVA] < 6/12. 55.2%, 29.0%, and 15.9% of these had good, borderline, and poor visual outcomes based on presenting vision; with best correction, these values were: 68.3 %, 18.6%, and 13.1%, respectively. Of 7 covariates evaluated in the multivariable generalized estimating equations (GEE analyses, gender was the only significant independent predictor of visual outcome. Women's eyes were nearly 4.38 times more likely to have suboptimal visual outcome (PVA<6/18 compared with men's eyes (adjusted odds ratio 4.38, 95% CI 1.96-9.79; P<0.001 after adjusting for the effect of household financial status. A higher proportion of women's than men's eyes had an irregular pupil (26.5% vs. 14.8% or severe/very severe astigmatism (27.5% vs. 18.2%. However, these differences did not reach statistical significance. Overall, more than one fourth (44/144 of cataract surgeries resulted in dissatisfaction. The only significant predictor of satisfaction was visual outcome (P <0

Marine pollution. Plastic waste inputs from land into the ocean.

Science.gov (United States)

Jambeck, Jenna R; Geyer, Roland; Wilcox, Chris; Siegler, Theodore R; Perryman, Miriam; Andrady, Anthony; Narayan, Ramani; Law, Kara Lavender

2015-02-13

Plastic debris in the marine environment is widely documented, but the quantity of plastic entering the ocean from waste generated on land is unknown. By linking worldwide data on solid waste, population density, and economic status, we estimated the mass of land-based plastic waste entering the ocean. We calculate that 275 million metric tons (MT) of plastic waste was generated in 192 coastal countries in 2010, with 4.8 to 12.7 million MT entering the ocean. Population size and the quality of waste management systems largely determine which countries contribute the greatest mass of uncaptured waste available to become plastic marine debris. Without waste management infrastructure improvements, the cumulative quantity of plastic waste available to enter the ocean from land is predicted to increase by an order of magnitude by 2025. Copyright © 2015, American Association for the Advancement of Science.

High degree of genetic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus).

Science.gov (United States)

Defaveri, Jacquelin; Shikano, Takahito; Shimada, Yukinori; Merilä, Juha

2013-09-01

Populations of widespread marine organisms are typically characterized by a low degree of genetic differentiation in neutral genetic markers, but much less is known about differentiation in genes whose functional roles are associated with specific selection regimes. To uncover possible adaptive population divergence and heterogeneous genomic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus), we used a candidate gene-based genome-scan approach to analyse variability in 138 microsatellite loci located within/close to (<6 kb) functionally important genes in samples collected from ten geographic locations. The degree of genetic differentiation in markers classified as neutral or under balancing selection-as determined with several outlier detection methods-was low (F(ST) = 0.033 or 0.011, respectively), whereas average FST for directionally selected markers was significantly higher (F(ST) = 0.097). Clustering analyses provided support for genomic and geographic heterogeneity in selection: six genetic clusters were identified based on allele frequency differences in the directionally selected loci, whereas four were identified with the neutral loci. Allelic variation in several loci exhibited significant associations with environmental variables, supporting the conjecture that temperature and salinity, but not optic conditions, are important drivers of adaptive divergence among populations. In general, these results suggest that in spite of the high degree of physical connectivity and gene flow as inferred from neutral marker genes, marine stickleback populations are strongly genetically structured in loci associated with functionally relevant genes. © 2013 John Wiley & Sons Ltd.

Principles of Biofouling Protection in Marine Sponges: A Model for the Design of Novel Biomimetic and Bio-inspired Coatings in the Marine Environment?

NARCIS (Netherlands)

Müller, W.E.G.; Wang, X.; Proksch, P.; Perry, C.C.; Osinga, R.; Gardères, J.; Schröder, H.C.

2013-01-01

The process of biofouling of marine structures and substrates, such as platforms or ship hulls, proceeds in multiple steps. Soon after the formation of an initial conditioning film, formed via the adsorption of organic particles to natural or manmade substrates, a population of different bacterial

Special issue Oceans and Humans Health: the ecology of marine opportunists.

Science.gov (United States)

Burge, Colleen A; Kim, Catherine J S; Lyles, Jillian M; Harvell, C Drew

2013-05-01

Opportunistic marine pathogens, like opportunistic terrestrial pathogens, are ubiquitous in the environment (waters, sediments, and organisms) and only cause disease in immune-compromised or stressed hosts. In this review, we discuss four host-pathogen interactions within the marine environment that are typically considered opportunistic: sea fan coral-fungus, eelgrass-Labyrinthula zosterae, sea fan-Labyrinthulomycetes, and hard clam-Quahog Parasite Unknown with particular focus on disease ecology, parasite pathology, host response, and known associated environmental conditions. Disease is a natural part of all ecosystems; however, in some cases, a shift in the balance between the host, pathogen, and the environment may lead to epizootics in natural or cultured populations. In marine systems, host-microbe interactions are less understood than their terrestrial counterparts. The biological and physical changes to the world's oceans, coupled with other anthropogenic influences, will likely lead to more opportunistic diseases in the marine environment.

Breast Cancer Screening: Cultural Beliefs and Diverse Populations

Science.gov (United States)

Simon, Cassandra E.

2006-01-01

This article addresses the role of culture in breast cancer screening behavior among African American, American Indian/Alaskan Native, Asian American/Pacific Islander, and Hispanic/Latina women. It reviews cultural beliefs, attitudes, and knowledge and their relative influence on women's decisions regarding health tests. The article explores how…

The importance of live-feed traps - farming marine fish species

DEFF Research Database (Denmark)

Nielsen, Rasmus; Nielsen, Max; Abate, Tenaw Gedefaw

2017-01-01

This article analyses the challenges of different live-feed regimes for the rearing of marine finfish larvae and discusses the potential alternative live feeds to avert a future live-feed trap. Live feeds are indispensable for the successful rearing of larvae of most marine fish species. Brine...... shrimps (Artemia) and rotifers comprise the live feeds of choice in marine aquaculture today. However, their nutritional composition is deficient in especially essential fatty acids, and enrichment with fish oil is needed. Fish oil is considered a limited resource owing to its origin in fully exploited...... wild fish stocks. Moreover, fluctuations of the natural population of Artemia will, most likely, influence future availability and prices. This emphasizes the need for optimal exploitation of available live-feed resources and development of new sustainable alternatives, such as copepods. An array...

Parasites in marine food webs

Science.gov (United States)

Lafferty, Kevin D.

2013-01-01

Most species interactions probably involve parasites. This review considers the extent to which marine ecologists should consider parasites to fully understand marine communities. Parasites are influential parts of food webs in estuaries, temperate reefs, and coral reefs, but their ecological importance is seldom recognized. Though difficult to observe, parasites can have substantial biomass, and they can be just as common as free-living consumers after controlling for body mass and trophic level. Parasites have direct impacts on the energetics of their hosts and some affect host behaviors, with ecosystem-level consequences. Although they cause disease, parasites are sensitive components of ecosystems. In particular, they suffer secondary extinctions due to biodiversity loss. Some parasites can also return to a system after habitat restoration. For these reasons, parasites can make good indicators of ecosystem integrity. Fishing can indirectly increase or decrease parasite populations and the effects of climate change on parasites are likely to be equally as complex.

New Waves in Marine Science Symposium: Marine Animal Communication.

Science.gov (United States)

Allen, Betty, Comp.

1989-01-01

Presented are the abstracts from three research projects on marine social systems which were a part of a marine science symposium. Five sets of activities on marine animal communication are included, one each for grades K-2, 3-5, 6-8 and 9-12, and informal education. (CW)

Oil Spills and Marine Mammals in British Columbia, Canada: Development and Application of a Risk-Based Conceptual Framework.

Science.gov (United States)

Jarvela Rosenberger, Adrianne L; MacDuffee, Misty; Rosenberger, Andrew G J; Ross, Peter S

2017-07-01

Marine mammals are inherently vulnerable to oil spills. We developed a conceptual framework to evaluate the impacts of potential oil exposure on marine mammals and applied it to 21 species inhabiting coastal British Columbia (BC), Canada. Oil spill vulnerability was determined by examining both the likelihood of species-specific (individual) oil exposure and the consequent likelihood of population-level effects. Oil exposure pathways, ecology, and physiological characteristics were first used to assign species-specific vulnerability rankings. Baleen whales were found to be highly vulnerable due to blowhole breathing, surface filter feeding, and invertebrate prey. Sea otters (Enhydra lutris) were ranked as highly vulnerable due to their time spent at the ocean surface, dense pelage, and benthic feeding techniques. Species-specific vulnerabilities were considered to estimate the likelihood of population-level effects occurring after oil exposure. Killer whale (Orcinus orca) populations were deemed at highest risk due to small population sizes, complex social structure, long lives, slow reproductive turnover, and dietary specialization. Finally, we related the species-specific and population-level vulnerabilities. In BC, vulnerability was deemed highest for Northern and Southern Resident killer whales and sea otters, followed by Bigg's killer whales and Steller sea lions (Eumetopias jubatus). Our findings challenge the typical "indicator species" approach routinely used and underscore the need to examine marine mammals at a species and population level for risk-based oil spill predictions. This conceptual framework can be combined with spill probabilities and volumes to develop more robust risk assessments and may be applied elsewhere to identify vulnerability themes for marine mammals.

Hygroscopicity and composition of Alaskan Arctic CCN during April 2008

Directory of Open Access Journals (Sweden)

R. H. Moore

2011-11-01

Full Text Available We present a comprehensive characterization of cloud condensation nuclei (CCN sampled in the Alaskan Arctic during the 2008 Aerosol, Radiation, and Cloud Processes affecting Arctic Climate (ARCPAC project, a component of the POLARCAT and International Polar Year (IPY initiatives. Four distinct air mass types were sampled including a cleaner Arctic background and a relatively pristine sea ice boundary layer as well as biomass burning and anthropogenic pollution plumes. Despite differences in chemical composition, inferred aerosol hygroscopicities were fairly invariant and ranged from κ = 0.1–0.3 over the atmospherically-relevant range of water vapor supersaturations studied. Organic aerosols sampled were found to be well-oxygenated, consistent with long-range transport and aerosol aging processes. However, inferred hygroscopicities are less than would be predicted based on previous parameterizations of biogenic oxygenated organic aerosol, suggesting an upper limit on organic aerosol hygroscopicity above which κ is less sensitive to the O:C ratio. Most Arctic aerosols act as CCN above 0.1 % supersaturation, although the data suggest the presence of an externally-mixed, non-CCN-active mode comprising approximately 0–20% of the aerosol number. CCN closure was assessed using measured size distributions, bulk chemical composition, and assumed aerosol mixing states; CCN predictions tended toward overprediction, with the best agreement (±0–20 % obtained by assuming the aerosol to be externally-mixed with soluble organics. Closure also varied with CCN concentration, and the best agreement was found for CCN concentrations above 100 cm⁻³ with a 1.5- to 3-fold overprediction at lower concentrations.

Self-recruitment in a coral reef fish population in a marine reserve

KAUST Repository

Herrera Sarrias, Marcela

2014-12-01

Marine protected areas (MPAs) have proliferated in the past decades to protect biodiversity and sustain fisheries. However, most of the MPA networks have been designed without taking into account a critical factor: the larval dispersal patterns of populations within and outside the reserves. The scale and predictability of larval dispersal, however, remain unknown due to the difficulty of measuring dispersal when larvae are minute (~ cm) compared to the potential scale of dispersal (~ km). Nevertheless, genetic approaches can now be used to make estimates of larval dispersal. The following thesis describes self-recruitment and connectivity patterns of a coral reef fish species (Centropyge bicolor) in Kimbe Bay, Papua New Guinea. To do this, microsatellite markers were developed to evaluate fine-scale genetics and recruit assignment via genetic parentage analysis. In this method, offspring are assigned to potential parents, so that larval dispersal distances can then be inferred for each individual larvae. From a total of 255 adults and 426 juveniles collected only 2 parentoffspring pairs were assigned, representing less than 1% self-recruitment. Previous data from the same study system showed that both Chaetodon vagagundus and Amphiprion percula have consistent high self-recuitment rates (~ 60%), despite having contrasting life history traits. Since C. bicolor and C. vagabundus have similar characteristics (e.g. reproductive mode, pelagic larval duration), comparable results were expected. On the contrary, the results of this study showed that dispersal patterns cannot be generalized across species. Hence the importance of studying different species and seascapes to better understand the patterns of larval dispersal. This, in turn, will be essential to improve the design and implementation of MPAs as conservation and management tools.

Designing trails for subaquatic tourism in Marine Protected Areas

Directory of Open Access Journals (Sweden)

Cristina Piñeiro-Corbeira

2014-05-01

Full Text Available Although the range of touristic activities that take place in the sea has greatly expanded in recent years, the marine realm continues to be one of the least known to the public. Scuba diving and snorkeling are popular activities in the marine environment. Among its benefits, snorkeling is simple, cheap, and accessible to a wide range of population. In this regard, it has considerable potential as a tool for environmental education as it allows a firsthand observation of the subaquatic seascape as well as a direct interaction with marine wildlife. These attributes, together with its low ecological impact, make snorkeling an activity particularly suitable for marine protected areas. Yet, its implementation in marine protected areas requires new tools for an appropriate use. Here, we show an innovative procedure for assessing the underwater seascape that should help in the designation of touristic subaquatic trails analogous to those commonly used in terrestrial landscapes. We elaborated a system of 18 “Perceptible Seascape Elements”, grouped into 9 Concepts, that leads to a “Potential Observation Index” summarizing the seabed landscape qualities that can be observed while snorkeling. Tests of this approach in a National Park (Parque Nacional Marítimo-Terrestre de las Islas Atlánticas de Galicia led to the design and ranking of 6 underwater trails. On the other hand, we used standardized questionnaires to determine the attributes of park’s visitors, their expectative, their perception of the marine environment, and previous skills in snorkeling. Many visitors were mostly unaware of the qualities of the marine environment of the National Park but we found considerable interest in new alternatives to enjoy the marine environment such as snorkeling. Our procedure and results could help to add snorkeling to the set of environmental education strategies already used in the Park.

Marine Robot Autonomy

CERN Document Server

2013-01-01

Autonomy for Marine Robots provides a timely and insightful overview of intelligent autonomy in marine robots. A brief history of this emerging field is provided, along with a discussion of the challenges unique to the underwater environment and their impact on the level of intelligent autonomy required.  Topics covered at length examine advanced frameworks, path-planning, fault tolerance, machine learning, and cooperation as relevant to marine robots that need intelligent autonomy.  This book also: Discusses and offers solutions for the unique challenges presented by more complex missions and the dynamic underwater environment when operating autonomous marine robots Includes case studies that demonstrate intelligent autonomy in marine robots to perform underwater simultaneous localization and mapping  Autonomy for Marine Robots is an ideal book for researchers and engineers interested in the field of marine robots.      

Larval Behavior and Natural Trace Element Signatures as Indicators of Crustacean Population Connectivity

OpenAIRE

Miller, Seth Haylen

2011-01-01

In an era of increasing governmental protection of marine resources and accelerating climate change, knowing how benthic populations of marine organisms are connected is of paramount importance. However, little is known about connectivity in the nearshore environment, particularly at ecologically and demographically relevant scales. Because the dispersive larval stage is the key to understanding population connectivity, my dissertation focused on developing a new technique for tracking larvae...

78 FR 19002 - Marine Mammal Protection Act; Draft Revised Stock Assessment Reports for Two Stocks of West...

Science.gov (United States)

2013-03-28

... animals which will result in the maximum productivity of the population or the species, keeping in mind... which significant new information is available, and (c) at least once every 3 years for all other stocks... Science, Marine Pollution Bulletin, Marine Technology Society Journal, Wildlife Monographs, Gulf and...

Recent sightings of marine mammals in Andaman Islands, India

Directory of Open Access Journals (Sweden)

Bitopan Malakar

2015-04-01

Full Text Available This study reports opportunistic sightings of marine mammals between August 2013 and January 2014 in the Andaman region.  Seven sightings were recorded during this period out of which one was of a Dugong, which is significant considering its small population size in India and limited data on its distribution and abundance.  The rest were 24 dolphins (Tursiops sp..  Four sightings were of the same pod of dolphins on different days at the same location.  Two sightings occurred during regular coral reef monitoring survey and the other five during fishery resource survey by trawling operations.  These sightings are of great significance as there is a lack of studies on marine mammals from the region.  Sighting records are useful for understanding aggregation site, behaviour, habits and habitat and residency patterns and provide important information for conservation of marine mammals. 

Don't bet against the natal homing abilities of marine fishes.

Science.gov (United States)

Bentzen, Paul; Bradbury, Ian R

2016-06-01

Whether marine fishes are capable of homing to their natal areas has long been something of an enigma. For some estuarine species or sharks (which have extended nondispersal juvenile stages or are born as relatively large, fully formed juveniles), the answer is clearly 'yes' (Thorrold et al. ; Feldheim et al. ), but for most marine fishes, the issue is much more mysterious. Many species have free-floating eggs, and most have pelagic, passively dispersing larvae. It is challenging to imagine how adult fish might navigate to a region of the ocean they experienced only as eggs or larvae, and easier to assume that such dispersal leads inexorably to high gene flow, and even panmixia. One way to resolve the conundrum would be to track fish from hatching to reproduction, but for marine fishes with tiny eggs and drifting larvae, this is notoriously difficult to do (Bradbury & Laurel ). In this issue of Molecular Ecology, Bonanomi et al. () use a creative approach to solve this challenge for Atlantic cod (Gadus morhua) populations that mingle in the vicinity of Greenland. They show that cod that disperse more than a 1000 km away from Iceland as eggs and larvae, then spend years growing on the far side of Greenland, while mixing with two local populations, return as adults to spawning areas near Iceland - and further, that this behaviour has remained stable over more than six decades. They manage this feat with a clever use of historical cod tracking data, modern genomic data and genetic analysis of decades-old DNA obtained from archived materials. Their results have important implications for our view of the biocomplexity of marine fish populations, and how we should manage them. © 2016 John Wiley & Sons Ltd.

Marine habitat mapping at Labuan Marine Park, Federal Territory of Labuan, Malaysia

Science.gov (United States)

Mustajap, Fazliana; Saleh, Ejria; Madin, John; Hamid, Shahimah Abdul

2015-06-01

Marine habitat mapping has recently become essential in coastal marine science research. It is one of the efforts to understand marine ecosystems, and thus to protect them. Habitat mapping is integral to marine-related industries such as fisheries, aquaculture, forestry and tourism. An assessment of marine habitat mapping was conducted at Labuan Marine Park (LMP), a marine protected area in the Federal Territory of Labuan. It is surrounded by shallow water within its islands (Kuraman, Rusukan Kecil and Rusukan Besar) with an area of 39.7 km2. The objectives of the study are to identify the substrate and types of marine habitat present within the park. Side scan sonar (SSS) (Aquascan TM) was used to determine the substrates and habitat while ground truthings were done through field observation and SCUBA diving survey. Seabed classification and marine habitat was based on NOAA's biogeography program. Three substrate types (sand, rock, silt) were identified in this area. The major marine habitats identified are corals, macro algae and small patches of sea grass. The study area is an important refuge for spawning and juvenile fish and supports the livelihood of the coastal communities on Labuan Island. Therefore, proper management is crucial in order to better maintain the marine protected area. The findings are significant and provide detailed baseline information on marine habitat for conservation, protection and future management in LMP.

Sex, Adiposity, and Hypertension Status Modify the Inverse Effect of Marine Food Intake on Blood Pressure in Alaska Native (Yup'ik) People.

Science.gov (United States)

Beaulieu-Jones, Brendin R; O'Brien, Diane M; Hopkins, Scarlett E; Moore, Jason H; Boyer, Bert B; Gilbert-Diamond, Diane

2015-05-01

Alaska Native people currently have a higher prevalence of hypertension than do nonnative Alaskans, although in the 1950s hypertension was rare among Alaska Native people. A novel biomarker of marine foods, the nitrogen isotope ratio (δ¹⁵N) in RBCs was shown to be negatively associated with systolic and diastolic blood pressure. Few studies have examined how individual characteristics modify the association of marine food intake with blood pressure. This exploratory analysis examined whether sex, adiposity, and hypertension modify the inverse association between marine food intake and blood pressure. We used covariate-adjusted linear models to describe the association between δ¹⁵N and blood pressure in 873 adult Alaska Native (Yup'ik) people who resided in 8 communities in southwest Alaska. We separately stratified by sex, body mass index (BMI) group, abdominal obesity, and hypertension status and assessed the interaction between δ¹⁵N and participant characteristics on blood pressure via likelihood ratio tests. The association between δ¹⁵N and systolic blood pressure was modified by sex, BMI status, and abdominal obesity, with the inverse association observed only in the male (β = -1.5; 95% CI: -2.4, -0.6 : , nonobese BMI (β = -1.7; 95% CI: -2.5, -1.0), and non-abdominally obese (β = -1.6; 95% CI: -2.4, -0.9) strata (all P-interaction blood pressure associated with δ¹⁵N was observed in the nonobese BMI (β = -1.1; 95% CI: -1.7, -0.5) and non-abdominally obese (β = -1.1; 95% CI: -1.7, -0.5) strata, although only the interaction between BMI group and δ¹⁵N with diastolic blood pressure was significant. The inverse association between δ¹⁵N and both systolic and diastolic blood pressure was observed in nonhypertensive individuals, although the comparison had limited power. The results were consistent with those identified by using combined RBC concentrations of eicosapentaenoic acid and docosahexaenoic acid as the biomarker of marine food

Bayesian inference reveals positive but subtle effects of experimental fishery closures on marine predator demographics

Science.gov (United States)

Barham, Barbara J.; Barham, Peter J.; Campbell, Kate J.; Crawford, Robert J. M.; Grigg, Jennifer; Horswill, Cat; Morris, Taryn L.; Pichegru, Lorien; Steinfurth, Antje; Weller, Florian; Winker, Henning

2018-01-01

Global forage-fish landings are increasing, with potentially grave consequences for marine ecosystems. Predators of forage fish may be influenced by this harvest, but the nature of these effects is contentious. Experimental fishery manipulations offer the best solution to quantify population-level impacts, but are rare. We used Bayesian inference to examine changes in chick survival, body condition and population growth rate of endangered African penguins Spheniscus demersus in response to 8 years of alternating time–area closures around two pairs of colonies. Our results demonstrate that fishing closures improved chick survival and condition, after controlling for changing prey availability. However, this effect was inconsistent across sites and years, highlighting the difficultly of assessing management interventions in marine ecosystems. Nevertheless, modelled increases in population growth rates exceeded 1% at one colony; i.e. the threshold considered biologically meaningful by fisheries management in South Africa. Fishing closures evidently can improve the population trend of a forage-fish-dependent predator—we therefore recommend they continue in South Africa and support their application elsewhere. However, detecting demographic gains for mobile marine predators from small no-take zones requires experimental time frames and scales that will often exceed those desired by decision makers. PMID:29343602

Spatio-temporal patterns in simple models of marine systems

Science.gov (United States)

Feudel, U.; Baurmann, M.; Gross, T.

2009-04-01

Spatio-temporal patterns in marine systems are a result of the interaction of population dynamics with physical transport processes. These physical transport processes can be either diffusion processes in marine sediments or in the water column. We study the dynamics of one population of bacteria and its nutrient in in a simplified model of a marine sediments, taking into account that the considered bacteria possess an active as well as an inactive state, where activation is processed by signal molecules. Furthermore the nutrients are transported actively by bioirrigation and passively by diffusion. It is shown that under certain conditions Turing patterns can occur which yield heterogeneous spatial patterns of the species. The influence of bioirrigation on Turing patterns leads to the emergence of ''hot spots``, i.e. localized regions of enhanced bacterial activity. All obtained patterns fit quite well to observed patterns in laboratory experiments. Spatio-temporal patterns appear in a predator-prey model, used to describe plankton dynamics. These patterns appear due to the simultaneous emergence of Turing patterns and oscillations in the species abundance in the neighborhood of a Turing-Hopf bifurcation. We observe a large variety of different patterns where i) stationary heterogeneous patterns (e.g. hot and cold spots) compete with spatio-temporal patterns ii) slowly moving patterns are embedded in an oscillatory background iii) moving fronts and spiral waves appear.

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats.

Science.gov (United States)

Simon, Meinhard; Scheuner, Carmen; Meier-Kolthoff, Jan P; Brinkhoff, Thorsten; Wagner-Döbler, Irene; Ulbrich, Marcus; Klenk, Hans-Peter; Schomburg, Dietmar; Petersen, Jörn; Göker, Markus

2017-06-01

Marine Rhodobacteraceae (Alphaproteobacteria) are key players of biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic environments and are often mutualists of eukaryotes. As 'Roseobacter clade', these 'roseobacters' are assumed to be monophyletic, but non-marine Rhodobacteraceae have not yet been included in phylogenomic analyses. Therefore, we analysed 106 genome sequences, particularly emphasizing gene sampling and its effect on phylogenetic stability, and investigated relationships between marine versus non-marine habitat, evolutionary origin and genomic adaptations. Our analyses, providing no unequivocal evidence for the monophyly of roseobacters, indicate several shifts between marine and non-marine habitats that occurred independently and were accompanied by characteristic changes in genomic content of orthologs, enzymes and metabolic pathways. Non-marine Rhodobacteraceae gained high-affinity transporters to cope with much lower sulphate concentrations and lost genes related to the reduced sodium chloride and organohalogen concentrations in their habitats. Marine Rhodobacteraceae gained genes required for fucoidan desulphonation and synthesis of the plant hormone indole 3-acetic acid and the compatible solutes ectoin and carnitin. However, neither plasmid composition, even though typical for the family, nor the degree of oligotrophy shows a systematic difference between marine and non-marine Rhodobacteraceae. We suggest the operational term 'Roseobacter group' for the marine Rhodobacteraceae strains.

GeoFORCE Alaska: Four-Year Field Program Brings Rural Alaskan High School Students into the STEM Pipeline

Science.gov (United States)

Fowell, S. J.; Rittgers, A.; Stephens, L.; Hutchinson, S.; Peters, H.; Snow, E.; Wartes, D.

2016-12-01

GeoFORCE Alaska is a four-year, field-based, summer geoscience program designed to raise graduation rates in rural Alaskan high schools, encourage participants to pursue college degrees, and increase the diversity of Alaska's technical workforce. Residents of predominantly Alaska Native villages holding degrees in science, technology, engineering, or math (STEM) bring valuable perspectives to decisions regarding management of cultural and natural resources. However, between 2010 and 2015 the average dropout rate for students in grades 7-12 was 8.5% per year in the North Slope School District and 7% per year in the Northwest Arctic School District. 2015 graduation rates were 70% and 75%, respectively. Statewide statistics highlight the challenge for Alaska Native students. During the 2014-2015 school year alone 37.6% of Alaska Native students dropped out of Alaskan public schools. At the college level, Alaska Native students are underrepresented in University of Alaska Fairbanks (UAF) science departments. Launched in 2012 by UAF in partnership with the longstanding University of Texas at Austin program, GeoFORCE applies the cohort model, leading the same group of high school students on geological field academies during four consecutive summers. Through a combination of active learning, teamwork, and hands-on projects at spectacular geological locations, students gain academic skills and confidence that facilitate high school and college success. To date, GeoFORCE Alaska has recruited two cohorts. 78% of these students identify as Alaska Native, reflecting community demographics. The inaugural cohort of 18 students from the North Slope Borough completed the Fourth-Year Academy in summer 2015. 94% of these students graduated from high school, at least 72% plan to attend college, and 33% will major in geoscience. A second cohort of 34 rising 9th and 10th graders entered the program in 2016. At the request of corporate sponsors, this cohort was recruited from both the

Marine nitrogen cycle

Digital Repository Service at National Institute of Oceanography (India)

Naqvi, S.W.A.

) such as the Marine nitrogen cycle The marine nitrogen cycle. ‘X’ and ‘Y’ are intra-cellular intermediates that do not accumulate in water column. (Source: Codispoti et al., 2001) Page 1 of 3Marine nitrogen cycle - Encyclopedia of Earth 11/20/2006http://www... and nitrous oxide budgets: Moving targets as we enter the anthropocene?, Sci. Mar., 65, 85-105, 2001. Page 2 of 3Marine nitrogen cycle - Encyclopedia of Earth 11/20/2006http://www.eoearth.org/article/Marine_nitrogen_cycle square6 Gruber, N.: The dynamics...

Marine Atmospheric Corrosion of Carbon Steel: A Review.

Science.gov (United States)

Alcántara, Jenifer; Fuente, Daniel de la; Chico, Belén; Simancas, Joaquín; Díaz, Iván; Morcillo, Manuel

2017-04-13

The atmospheric corrosion of carbon steel is an extensive topic that has been studied over the years by many researchers. However, until relatively recently, surprisingly little attention has been paid to the action of marine chlorides. Corrosion in coastal regions is a particularly relevant issue due the latter's great importance to human society. About half of the world's population lives in coastal regions and the industrialisation of developing countries tends to concentrate production plants close to the sea. Until the start of the 21st century, research on the basic mechanisms of rust formation in Cl - -rich atmospheres was limited to just a small number of studies. However, in recent years, scientific understanding of marine atmospheric corrosion has advanced greatly, and in the authors' opinion a sufficient body of knowledge has been built up in published scientific papers to warrant an up-to-date review of the current state-of-the-art and to assess what issues still need to be addressed. That is the purpose of the present review. After a preliminary section devoted to basic concepts on atmospheric corrosion, the marine atmosphere, and experimentation on marine atmospheric corrosion, the paper addresses key aspects such as the most significant corrosion products, the characteristics of the rust layers formed, and the mechanisms of steel corrosion in marine atmospheres. Special attention is then paid to important matters such as coastal-industrial atmospheres and long-term behaviour of carbon steel exposed to marine atmospheres. The work ends with a section dedicated to issues pending, noting a series of questions in relation with which greater research efforts would seem to be necessary.

Marine Atmospheric Corrosion of Carbon Steel: A Review

Science.gov (United States)

Alcántara, Jenifer; de la Fuente, Daniel; Chico, Belén; Simancas, Joaquín; Díaz, Iván; Morcillo, Manuel

2017-01-01

The atmospheric corrosion of carbon steel is an extensive topic that has been studied over the years by many researchers. However, until relatively recently, surprisingly little attention has been paid to the action of marine chlorides. Corrosion in coastal regions is a particularly relevant issue due the latter’s great importance to human society. About half of the world’s population lives in coastal regions and the industrialisation of developing countries tends to concentrate production plants close to the sea. Until the start of the 21st century, research on the basic mechanisms of rust formation in Cl−-rich atmospheres was limited to just a small number of studies. However, in recent years, scientific understanding of marine atmospheric corrosion has advanced greatly, and in the authors’ opinion a sufficient body of knowledge has been built up in published scientific papers to warrant an up-to-date review of the current state-of-the-art and to assess what issues still need to be addressed. That is the purpose of the present review. After a preliminary section devoted to basic concepts on atmospheric corrosion, the marine atmosphere, and experimentation on marine atmospheric corrosion, the paper addresses key aspects such as the most significant corrosion products, the characteristics of the rust layers formed, and the mechanisms of steel corrosion in marine atmospheres. Special attention is then paid to important matters such as coastal-industrial atmospheres and long-term behaviour of carbon steel exposed to marine atmospheres. The work ends with a section dedicated to issues pending, noting a series of questions in relation with which greater research efforts would seem to be necessary. PMID:28772766

Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean.

Science.gov (United States)

Allers, Elke; Wright, Jody J; Konwar, Kishori M; Howes, Charles G; Beneze, Erica; Hallam, Steven J; Sullivan, Matthew B

2013-02-01

Marine Group A (MGA) is a candidate phylum of Bacteria that is ubiquitous and abundant in the ocean. Despite being prevalent, the structural and functional properties of MGA populations remain poorly constrained. Here, we quantified MGA diversity and population structure in relation to nutrients and O(2) concentrations in the oxygen minimum zone (OMZ) of the Northeast subarctic Pacific Ocean using a combination of catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) and 16S small subunit ribosomal RNA (16S rRNA) gene sequencing (clone libraries and 454-pyrotags). Estimates of MGA abundance as a proportion of total bacteria were similar across all three methods although estimates based on CARD-FISH were consistently lower in the OMZ (5.6%±1.9%) than estimates based on 16S rRNA gene clone libraries (11.0%±3.9%) or pyrotags (9.9%±1.8%). Five previously defined MGA subgroups were recovered in 16S rRNA gene clone libraries and five novel subgroups were defined (HF770D10, P262000D03, P41300E03, P262000N21 and A714018). Rarefaction analysis of pyrotag data indicated that the ultimate richness of MGA was very nearly sampled. Spearman's rank analysis of MGA abundances by CARD-FISH and O(2) concentrations resulted in significant correlation. Analyzed in more detail by 16S rRNA pyrotag sequencing, MGA operational taxonomic units affiliated with subgroups Arctic95A-2 and A714018 comprised 0.3-2.4% of total bacterial sequences and displayed strong correlations with decreasing O(2) concentration. This study is the first comprehensive description of MGA diversity using complementary techniques. These results provide a phylogenetic framework for interpreting future studies on ecotype selection among MGA subgroups, and suggest a potentially important role for MGA in the ecology and biogeochemistry of OMZs.

Effects of thermal pollution on marine life

International Nuclear Information System (INIS)

Peres, J.M.

1976-01-01

After a short review of the conditions and importance of the releases of heated water from fossil- or nuclear- fueled power plants, the two-fold consequences of thermal pollution are stated: consequences from the transit damaging, by thermal stress and/or mechanical effects, planctonic organisms attracted in the stream, and consequences from heating of the receiving environment. Other related effect on marine populations should not be neglected: effects of antifouling (chlorine mostly) and anticorrosion products; synergic action of raised temperature and chemical pollutants. In the present state of knowledge, the hazards of thermal pollution in the marine environment should not be overestimated so far as effluent dilution and diffusion are sufficient, which implies that the site be selected in an area where coastal circulation is strong enough and the disposal procedures be improved [fr

Population Genetic Status of the Western Indian Ocean

African Journals Online (AJOL)

Abstract—Population genetics offers a useful technique for studying the population structure of marine organisms and has relevance to both systematics and the conservation of biodiversity. The Western Indian Ocean (WIO) is faced with increasing evidence of degradation and effective management initiatives are needed to ...

Screening for Viral Hemorrhagic Septicemia Virus in Marine Fish along the Norwegian Coastal Line

DEFF Research Database (Denmark)

Sandlund, Nina; Gjerset, Britt; Bergh, Øivind

2014-01-01

Viral hemorrhagic septicemia virus (VHSV) infects a wide range of marine fish species. To study the occurrence of VHSV in wild marine fish populations in Norwegian coastal waters and fjord systems a total of 1927 fish from 39 different species were sampled through 5 research cruises conducted......, and to our knowledge the first detection of VHSV in silvery pout. However, low prevalence of VHSV genotype Ib in Atlantic herring and other wild marine fish are well known in other parts of Europe. Earlier there have been a few reports of disease outbreaks in farmed rainbow trout with VHSV of genotype Ib...

Enewetak Marine Biological Laboratory 1973--1974 annual report. Final report

International Nuclear Information System (INIS)

1974-01-01

Brief summaries are presented of ecological studies carried out at Enewetak from July 1973 through June 30, 1974. Data are included on the content of 90 Sr in the skeleton of coral. Other studies included measurements of the chemical composition of 60 marine animals; and the growth rate, interactions of prey populations, food supply, food chains, and population dynamics of communities of crustaceans, molluscs, corals, sponges, algae, reef fishes, and shore birds. (U.S.)

Assessment of permissible low-level releases of radionuclides into the marine environment

International Nuclear Information System (INIS)

Kryshev, I.I.; Sazykina, T.G.

2002-01-01

The subject of this paper is radio-ecological assessment of permissible low-level releases of radionuclides in sea waters ensuring the radiological protection of the human population, as well as marine biota. (author)

Characterizing wild bird contact and seropositivity to highly pathogenic avian influenza A (H5N1) virus in Alaskan residents.

Science.gov (United States)

Reed, Carrie; Bruden, Dana; Byrd, Kathy K; Veguilla, Vic; Bruce, Michael; Hurlburt, Debby; Wang, David; Holiday, Crystal; Hancock, Kathy; Ortiz, Justin R; Klejka, Joe; Katz, Jacqueline M; Uyeki, Timothy M

2014-09-01

Highly pathogenic avian influenza A (HPAI) H5N1 viruses have infected poultry and wild birds on three continents with more than 600 reported human cases (59% mortality) since 2003. Wild aquatic birds are the natural reservoir for avian influenza A viruses, and migratory birds have been documented with HPAI H5N1 virus infection. Since 2005, clade 2.2 HPAI H5N1 viruses have spread from Asia to many countries. We conducted a cross-sectional seroepidemiological survey in Anchorage and western Alaska to identify possible behaviors associated with migratory bird exposure and measure seropositivity to HPAI H5N1. We enrolled rural subsistence bird hunters and their families, urban sport hunters, wildlife biologists, and a comparison group without bird contact. We interviewed participants regarding their exposures to wild birds and collected blood to perform serologic testing for antibodies against a clade 2.2 HPAI H5N1 virus strain. Hunters and wildlife biologists reported exposures to wild migratory birds that may confer risk of infection with avian influenza A viruses, although none of the 916 participants had evidence of seropositivity to HPAI H5N1. We characterized wild bird contact among Alaskans and behaviors that may influence risk of infection with avian influenza A viruses. Such knowledge can inform surveillance and risk communication surrounding HPAI H5N1 and other influenza viruses in a population with exposure to wild birds at a crossroads of intercontinental migratory flyways. © 2014 The Authors. Influenza and Other Respiratory Viruses Published by John Wiley & Sons Ltd.

Noise in the Sea and Its Impacts on Marine Organisms

Science.gov (United States)

Peng, Chao; Zhao, Xinguo; Liu, Guangxu

2015-01-01

With the growing utilization and exploration of the ocean, anthropogenic noise increases significantly and gives rise to a new kind of pollution: noise pollution. In this review, the source and the characteristics of noise in the sea, the significance of sound to marine organisms, and the impacts of noise on marine organisms are summarized. In general, the studies about the impact of noise on marine organisms are mainly on adult fish and mammals, which account for more than 50% and 20% of all the cases reported. Studies showed that anthropogenic noise can cause auditory masking, leading to cochlear damage, changes in individual and social behavior, altered metabolisms, hampered population recruitment, and can subsequently affect the health and service functions of marine ecosystems. However, since different sampling methodologies and unstandarized measurements were used and the effects of noise on marine organisms are dependent on the characteristics of the species and noise investigated, it is difficult to compare the reported results. Moreover, the scarcity of studies carried out with other species and with larval or juvenile individuals severely constrains the present understanding of noise pollution. In addition, further studies are needed to reveal in detail the causes for the detected impacts. PMID:26437424

Myxosporean parasites of marine fishes: their distribution in the world's oceans.

Science.gov (United States)

MacKenzie, K; Kalavati, C

2014-11-01

Myxosporeans are among the most common parasites of marine fish. Their economic importance is mainly as pathogens of both wild and farmed fish, but they have also been used as biological tags in population studies of their fish hosts. Here we review the literature and show the distribution of different families of Myxosporea infecting marine fishes in the world's oceans - the North Atlantic, South Atlantic, North Pacific, South Pacific and Indian. We also analyse their distribution in different orders of marine fishes. New families, genera and species of marine Myxosporea are continually being described and many more await description. Some regions, in particular the North Atlantic, have been more thoroughly investigated than others, so the analyses we present may not reflect the true distributions and we acknowledge that these may change considerably as other regions are investigated more fully. The distribution of myxosporean families in different taxonomic groups of marine fishes can indicate phylogenetic relationships between parasite and host and suggest the origins of different myxosporean taxa. We present some examples, while recognizing that new molecular information on phylogenetic relationships within the Myxozoa will lead to major changes in classification.

Effects of sex change on the implications of marine reserves for fisheries.

Science.gov (United States)

Chan, Neil C S; Connolly, Sean R; Mapstone, Bruce D

2012-04-01

Marine reserves have become widely used in biodiversity conservation and are increasingly proposed as fisheries management tools. Previous modeling studies have found that reserves may increase or decrease yields, depending on local environmental conditions and on the specific life-history traits of the fishery species. Sex-changing (female-to-male) fish are targets of some of the most important commercial and recreational fisheries in the world. The potential for disproportionate removal of the larger, older sex of such species requires new theory to facilitate our understanding of how reserves will affect the yields of surrounding fisheries, relative to fishes with separate sexes. We investigated this question by modeling the effects of marine reserves on a non-sex-changing and a sex-changing population. We used demographic parameter estimates for the common coral trout as a baseline, and we conducted extensive sensitivity analyses to determine how sustainable yields of sex-changing species are likely to be affected by reserves across a broad range of life-history parameters. Our findings indicate that fisheries for sex-changing species are unlikely to receive the same yield-enhancing benefit that non-sex-changing fisheries enjoy from marine reserves, and that often reserves tend to reduce sustainable yields for a given overall population size. Specifically, the increased egg production and high fertilization success within reserves is more than offset by the reduced egg production and fertilization success in the fished areas, relative to a system in which fishing mortality is distributed more evenly over the entire system. A key reason for this appears to be that fertilization success is reduced, on average, when males are unevenly distributed among subpopulations, as is the case when reserves are present. These findings suggests that, for sex-changing populations, reserves are more suited to rebuilding overfished populations and sustaining fishery viability

Population connectivity of an overexploited coastal fish ...

African Journals Online (AJOL)

Sciaenidae), in an ocean-warming hotspot. ... in this global hotspot of seawater temperature changes. Keywords: Angola–Benguela Frontal Zone, climate change, demographic history, marine fisheries, molecular ecology, population structure ...

Seabirds as a subsistence and cultural resource in two remote Alaskan communities

Directory of Open Access Journals (Sweden)

Rebecca C. Young

2014-12-01

Full Text Available Small rural Alaskan communities face many challenges surrounding rapid social and ecological change. The role of local subsistence resources may change over time because of changes in social perception, economic need, and cultural patterns of use. We look at the Bering Sea's Pribilof Islands, comprising two very small communities, and investigate the relationship between the local residents and seabirds as a natural resource. Seabirds may strengthen ties to older ways of life and have potential for future economic opportunities, or modernization may direct interest away from seabirds as a cultural and economic resource. We conducted a survey and interviews of residents of the two Pribilof Island communities, St. Paul and St. George, to assess opinions toward seabirds and harvest levels. Seabirds were generally regarded as important both to individuals and the wider community. However, current levels of subsistence harvest are low, and few people continue to actively harvest or visit seabird colonies. Respondents expressed desire for greater knowledge about seabirds and also concerns about the current economy of the islands and a lack of future development prospects. Despite the challenging economic conditions, the villages retain a strong sense of community and place value on their environment and on seabirds. Surveys indicated an interest in developing eco-tourism based around local resources, including seabirds, as a way to improve the economy.

Microbial activity in Alaskan taiga soils contaminated by crude oil in 1976

International Nuclear Information System (INIS)

Monroe, E.M.; Lindstrom, J.E.; Brown, E.J.; Raddock, J.F.

1995-01-01

Biodegradation, often measured via microbial activity, includes destruction of environmental pollutants by living microorganisms and is dependent upon many physical and chemical factors. Effects of mineral nutrients and organic matter on biodegradation of Prudhoe Bay crude oil were investigated at a nineteen-year-old oil spill site in Alaskan taiga. Microcosms of two different soil types from the spill site; one undeveloped soil with forest litter and detritus (O horizon) and one more developed with lower organic content (A horizon), were treated with various nitrogen and phosphorus amendments, and incubated for up to six weeks. Each microcosm was sampled periodically and assayed for hydrocarbon mineralization potential using radiorespirometry, for total carbon dioxide respired using gas chromatography, and for numbers of hydrocarbon-degrading bacteria and heterotrophic bacteria using most probable number counting techniques. Organic matter in the O horizon soil along with combinations of mineral nutrients were found to stimulate microbial activity. No combination of mineral nutrient additions to the A horizon soil stimulated any of the parameters above those measured in control microcosms. The results of this study indicate that adding mineral nutrients and tilling the O horizon into the A horizon of subarctic soils contaminated with crude oil, would stimulate microbial activity, and therefore the biodegradation potential, ultimately increasing the rate of destruction of crude oil in these soils

Conservation of the Critically Endangered Eastern Australian Population of the Grey Nurse Shark ( Carcharias taurus) Through Cross-Jurisdictional Management of a Network of Marine-Protected Areas

Science.gov (United States)

Lynch, Tim P.; Harcourt, Robert; Edgar, Graham; Barrett, Neville

2013-12-01

Between 2001 and 2009, 26 marine-protected areas (MPA) were established on the east Australian seaboard, at least in part, to manage human interactions with a critically endangered population of grey nurse shark, Carcharias taurus. This network is spread across six MPA systems and includes all 19 sites outlined in the National Recovery Plan for C. taurus, though five sites remain open to some forms of fishing. The reserve network has complex cross-jurisdictional management, as the sharks occur in waters controlled by the Australian states of New South Wales (NSW) and Queensland, as well as by the Commonwealth (Federal) government. Jurisdiction is further complicated by fisheries and conservation departments both engaging in management activities within each state. This has resulted in protected area types that include IUCN category II equivalent zones in NSW, Queensland, and Commonwealth marine parks that either overlay or complement another large scaled network of protected sites called critical habitats. Across the network, seven and eight rule permutations for diving and fishing, respectively, are applied to this population of sharks. Besides sites identified by the recovery plan, additional sites have been protected as part of the general development of MPA networks. A case study at one of these sites, which historically was known to be occupied by C. taurus but had been abandoned, appears to shows re-establishment of an aggregation of juvenile and sub-adult sharks. Concurrent with the re-establishment of the aggregation, a local dive operator increased seasonal dive visitation rates at the site fourfold. As a precautionary measure, protection of abandoned sites, which includes nursery and gestating female habitats are options that may assist recovery of the east coast population of C. taurus.

Continuously amplified warming in the Alaskan Arctic: Implications for estimating global warming hiatus

Science.gov (United States)

Wang, Kang; Zhang, Tingjun; Zhang, Xiangdong; Clow, Gary D.; Jafarov, Elchin E.; Overeem, Irina; Romanovsky, Vladimir; Peng, Xiaoqing; Cao, Bin

2017-01-01

Historically, in situ measurements have been notoriously sparse over the Arctic. As a consequence, the existing gridded data of surface air temperature (SAT) may have large biases in estimating the warming trend in this region. Using data from an expanded monitoring network with 31 stations in the Alaskan Arctic, we demonstrate that the SAT has increased by 2.19°C in this region, or at a rate of 0.23°C/decade during 1921–2015. Meanwhile, we found that the SAT warmed at 0.71°C/decade over 1998–2015, which is 2 to 3 times faster than the rate established from the gridded data sets. Focusing on the “hiatus” period 1998–2012 as identified by the Intergovernmental Panel on Climate Change (IPCC) report, the SAT has increased at 0.45°C/decade, which captures more than 90% of the regional trend for 1951–2012. We suggest that sparse in situ measurements are responsible for underestimation of the SAT change in the gridded data sets. It is likely that enhanced climate warming may also have happened in the other regions of the Arctic since the late 1990s but left undetected because of incomplete observational coverage.

Constraining the 2012-2014 growing season Alaskan methane budget using CARVE aircraft measurements

Science.gov (United States)

Hartery, S.; Chang, R. Y. W.; Commane, R.; Lindaas, J.; Miller, S. M.; Wofsy, S. C.; Karion, A.; Sweeney, C.; Miller, C. E.; Dinardo, S. J.; Steiner, N.; McDonald, K. C.; Watts, J. D.; Zona, D.; Oechel, W. C.; Kimball, J. S.; Henderson, J.; Mountain, M. E.

2015-12-01

Soil in northen latitudes contains rich carbon stores which have been historically preserved via permafrost within the soil bed; however, recent surface warming in these regions is allowing deeper soil layers to thaw, influencing the net carbon exchange from these areas. Due to the extreme nature of its climate, these eco-regions remain poorly understood by most global models. In this study we analyze methane fluxes from Alaska using in situ aircraft observations from the 2012-2014 Carbon in Arctic Reservoir Vulnerability Experiment (CARVE). These observations are coupled with an atmospheric particle transport model which quantitatively links surface emissions to atmospheric observations to make regional methane emission estimates. The results of this study are two-fold. First, the inter-annual variability of the methane emissions was found to be <1 Tg over the area of interest and is largely influenced by the length of time the deep soil remains unfrozen. Second, the resulting methane flux estimates and mean soil parameters were used to develop an empirical emissions model to help spatially and temporally constrain the methane exchange at the Alaskan soil surface. The empirical emissions model will provide a basis for exploring the sensitivity of methane emissions to subsurface soil temperature, soil moisture, organic carbon content, and other parameters commonly used in process-based models.

A novel speciation alternative for the determination of inorganic arsenic in marine samples

DEFF Research Database (Denmark)

Rasmussen, Rie Romme; Hedegaard, Rikke Susanne Vingborg; Herbst, M. Birgitte Koch

Arsenic (As) is bioaccumulated from seawater to concentrations in the mg/kg range in marine animals. More than 50 naturally-occurring arsenic containing species, both inorganic and organic forms, have been identified in marine animals. The organic forms are mainly considered to be non......-toxic, whereas inorganic arsenic is highly toxic and exposure may lead to severe adverse effects including cancer. Since seafood is the major dietary source for arsenic exposure in the European population, arsenic speciation analysis of marine samples is highly relevant for food safety. However, most data...... of inorganic arsenic in marine based food is based on microwave extraction, species separation by strong anion solid phase extraction (SPE) and hydride generation atomic absorption spectrometry (HG-AAS) detection. Separation organic arsenic compounds (e.g. MA, DMA and AB) and inorganic arsenic in the form...

Combining genetic and demographic data for the conservation of a Mediterranean marine habitat-forming species.

Directory of Open Access Journals (Sweden)

Rosana Arizmendi-Mejía

Full Text Available The integration of ecological and evolutionary data is highly valuable for conservation planning. However, it has been rarely used in the marine realm, where the adequate design of marine protected areas (MPAs is urgently needed. Here, we examined the interacting processes underlying the patterns of genetic structure and demographic strucuture of a highly vulnerable Mediterranean habitat-forming species (i.e. Paramuricea clavata (Risso, 1826, with particular emphasis on the processes of contemporary dispersal, genetic drift, and colonization of a new population. Isolation by distance and genetic discontinuities were found, and three genetic clusters were detected; each submitted to variations in the relative impact of drift and gene flow. No founder effect was found in the new population. The interplay of ecology and evolution revealed that drift is strongly impacting the smallest, most isolated populations, where partial mortality of individuals was highest. Moreover, the eco-evolutionary analyses entailed important conservation implications for P. clavata. Our study supports the inclusion of habitat-forming organisms in the design of MPAs and highlights the need to account for genetic drift in the development of MPAs. Moreover, it reinforces the importance of integrating genetic and demographic data in marine conservation.

Marine Environmental History

DEFF Research Database (Denmark)

Poulsen, Bo

2012-01-01

human society and natural marine resources. Within this broad topic, several trends and objectives are discernable. The essay argue that the so-called material marine environmental history has its main focus on trying to reconstruct the presence, development and environmental impact of past fisheries......This essay provides an overview of recent trends in the historiography of marine environmental history, a sub-field of environmental history which has grown tremendously in scope and size over the last c. 15 years. The object of marine environmental history is the changing relationship between...... and whaling operations. This ambition often entails a reconstruction also of how marine life has changed over time. The time frame rages from Paleolithicum to the present era. The field of marine environmental history also includes a more culturally oriented environmental history, which mainly has come...

Disparities in Prostate, Lung, Breast, and Colorectal Cancer Survival and Comorbidity Status among Urban American Indians and Alaskan Natives.

Science.gov (United States)

Emerson, Marc A; Banegas, Matthew P; Chawla, Neetu; Achacoso, Ninah; Alexeeff, Stacey E; Adams, Alyce S; Habel, Laurel A

2017-12-01

Cancer is the second leading cause of death among American Indians and Alaskan Natives (AIAN), although cancer survival information in this population is limited, particularly among urban AIAN. In this retrospective cohort study, we compared all-cause and prostate, breast, lung, and colorectal cancer-specific mortality among AIAN ( n = 582) and non-Hispanic white (NHW; n = 82,696) enrollees of Kaiser Permanente Northern California (KPNC) diagnosed with primary invasive breast, prostate, lung, or colorectal cancer from 1997 to 2015. Tumor registry and other electronic health records provided information on sociodemographic, comorbidity, tumor, clinical, and treatment characteristics. Cox regression models were used to estimate adjusted survival curves and hazard ratios (HR) with 95% confidence intervals (CI). AIAN had a significantly higher comorbidity burden compared with NHW ( P cancer-specific mortality were significantly higher for AIAN than NHW patients with breast cancer (HR, 1.47; 95% CI, 1.13-1.92) or with prostate cancer (HR, 1.87; 95% CI, 1.14-3.06) but not for AIAN patients with lung and colorectal cancer. Despite approximately equal access to preventive services and cancer care in this setting, we found higher mortality for AIAN than NHW with some cancers, and a greater proportion of AIAN cancer patients with multiple comorbid conditions. This study provides severely needed information on the cancer experience of the 71% of AIANs who live in urban areas and access cancer care outside of the Indian Health Services, from which the vast majority of AIAN cancer information comes. Cancer Res; 77(23); 6770-6. ©2017 AACR . ©2017 American Association for Cancer Research.

Differential cold-shock resistance among acclimated European mussel populations

NARCIS (Netherlands)

Jansen, J.M.; Wendelaar Bonga, S.E.; Hummel, H.

2007-01-01

To study differential cold-shock resistance of marine mussel populations (Mytilus spp.) from different climatic regions in Europe, we sampled 12 populations, ranging from 43 to 58°N. Minimum critical temperatures for aerobic metabolism (CTmin) were determined before and after 3 months of common

Recovery of Durvillaea antarctica (Durvilleales) inside and outside Las Cruces Marine Reserve, Chile.

Science.gov (United States)

Castilla, J C; Campo, M A; Bustamante, R H

2007-07-01

We present the results for over two decades of monitoring on intertidal food-gatherers and the population of the low rocky shore dweller kelp Durvillaea antarctica, a short-distance disperser, inside and outside the no-take marine reserve, Estacion Costera de Investigaciones Marinas (ECIM), at Las Cruces, central Chile. It was hypothesized that protection of an initially extremely depleted population would recover by recolonizing first the no-take area and then adjacent non-protected (exploited) areas. We found that recovery of D. antarctica occurred slowly inside ECIM, with increase in density and biomass, of up to three orders of magnitude as compared to an adjacent non-protected area, which showed approximately 2-yr delay. These results suggest that the kelp population inside ECIM was likely regulated via intraspecific competition, which did not occur outside. Results showed no evidence for juvenile vs. adult density dependence other than a weak relationship for the central area of ECIM. These findings also suggest that the population recovery and cross-boundary seeding subsides affected the population dynamics. Understanding these dynamics may enhance management and conservation policies. Our work highlights the critical value of baseline and long-term comparative studies in marine no-take protected and non-protected areas for understanding how population processes respond to human and conservation practices.

Applications of random forest feature selection for fine-scale genetic population assignment.

Science.gov (United States)

Sylvester, Emma V A; Bentzen, Paul; Bradbury, Ian R; Clément, Marie; Pearce, Jon; Horne, John; Beiko, Robert G

2018-02-01

Genetic population assignment used to inform wildlife management and conservation efforts requires panels of highly informative genetic markers and sensitive assignment tests. We explored the utility of machine-learning algorithms (random forest, regularized random forest and guided regularized random forest) compared with F ST ranking for selection of single nucleotide polymorphisms (SNP) for fine-scale population assignment. We applied these methods to an unpublished SNP data set for Atlantic salmon ( Salmo salar ) and a published SNP data set for Alaskan Chinook salmon ( Oncorhynchus tshawytscha ). In each species, we identified the minimum panel size required to obtain a self-assignment accuracy of at least 90% using each method to create panels of 50-700 markers Panels of SNPs identified using random forest-based methods performed up to 7.8 and 11.2 percentage points better than F ST -selected panels of similar size for the Atlantic salmon and Chinook salmon data, respectively. Self-assignment accuracy ≥90% was obtained with panels of 670 and 384 SNPs for each data set, respectively, a level of accuracy never reached for these species using F ST -selected panels. Our results demonstrate a role for machine-learning approaches in marker selection across large genomic data sets to improve assignment for management and conservation of exploited populations.

Marine dispersal determines the genetic population structure of migratory stream fauna of Puerto Rico: evidence for island-scale population recovery processes

Science.gov (United States)

Benjamin D. Cook; Sofie Bernays; Catherine M. Pringle; Jane M. Hughes

2009-01-01

Various components of island stream faunas, including caridean shrimps, fish, and gastropods, undertake obligate amphidromous migration, whereby larvae are released in upstream freshwater reaches, drift downstream to estuaries or marine waters, then migrate upstream as postlarvae to freshwater adult habitats. Longitudinal migration from estuaries to headwaters is well...

Marine subsidies of island communities in the Gulf of California: evidence from stable carbon and nitrogen isotopes

International Nuclear Information System (INIS)

Anderson, W.B.; Polis, G.A.

1998-01-01

Coastal sites support larger (2 to > 100 x) populations of many consumers than inland sites on islands in the Gulf of California. Previous data suggested that subsidies of energy and nutrients from the ocean allowed large coastal populations. Stable carbon and nitrogen isotopes are frequently used to analyse diet composition of organisms: they are particularly useful to distinguish between diet sources with distinct isotopic signatures, such as marine and terrestrial diets. We analyzed the 13 C and 15 N concentrations of coastal versus inland spiders and scorpions to test the hypothesis that coastal individuals exhibited more strongly marine-based diets than inland individuals. Coastal spiders and scorpions were significantly more enriched in 13 C and 15 N than inland spiders and scorpions, suggesting that the coastal individuals consumed more marine-based foods than their inland counterparts. These patterns existed in both drought years and wet El Nino years. However, the marine influence was stronger in drought years when terrestrial productivity was nearly non-existent, than in wet years when terrestrial productivity increased by an order of magnitude. (au)

Actinide isotopes in the marine environment

International Nuclear Information System (INIS)

Holm, E.; Fukai, R.

1986-01-01

Studies of actinide isotopes in the environment are important not only from the viewpoint of their radiological effects on human life, but also from the fact that they act as excellent biochemical and geochemical tracers especially in the marine environment. For several of the actinide isotopes there is still a lack of basic data on concentration levels and further investigations on their chemical and physical speciation are required to understand their behaviour in the marine environment. The measured and estimated activity concentration levels of artificial actinides are at present in general a few orders of magnitude lower than those of the natural ones and their concentration factors in biota are relatively low, except in a few species of macroalgae and phytoplankton. The contribution from seafood to total ingestion of actinides by the world population is a few per cent and, therefore, the dose to man from these long-lived radionuclides caused by seafood ingestion is usually low. (orig.)

Genome-wide association analysis identifies a mutation in the thiamine transporter 2 (SLC19A3 gene associated with Alaskan Husky encephalopathy.

Directory of Open Access Journals (Sweden)

Karen M Vernau

Full Text Available Alaskan Husky Encephalopathy (AHE has been previously proposed as a mitochondrial encephalopathy based on neuropathological similarities with human Leigh Syndrome (LS. We studied 11 Alaskan Husky dogs with AHE, but found no abnormalities in respiratory chain enzyme activities in muscle and liver, or mutations in mitochondrial or nuclear genes that cause LS in people. A genome wide association study was performed using eight of the affected dogs and 20 related but unaffected control AHs using the Illumina canine HD array. SLC19A3 was identified as a positional candidate gene. This gene controls the uptake of thiamine in the CNS via expression of the thiamine transporter protein THTR2. Dogs have two copies of this gene located within the candidate interval (SLC19A3.2 - 43.36-43.38 Mb and SLC19A3.1 - 43.411-43.419 Mb on chromosome 25. Expression analysis in a normal dog revealed that one of the paralogs, SLC19A3.1, was expressed in the brain and spinal cord while the other was not. Subsequent exon sequencing of SLC19A3.1 revealed a 4bp insertion and SNP in the second exon that is predicted to result in a functional protein truncation of 279 amino acids (c.624 insTTGC, c.625 C>A. All dogs with AHE were homozygous for this mutation, 15/41 healthy AH control dogs were heterozygous carriers while 26/41 normal healthy AH dogs were wild type. Furthermore, this mutation was not detected in another 187 dogs of different breeds. These results suggest that this mutation in SLC19A3.1, encoding a thiamine transporter protein, plays a critical role in the pathogenesis of AHE.

Radiation Dose Assessment Model for Marine Biota (K-BIOTA-DYN-M)

Energy Technology Data Exchange (ETDEWEB)

Keum, Dong-Kwon; Kim, Byeong-Ho; Jun, In; Lim, Kwang-Muk; Choi, Yong-Ho [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

2014-10-15

In this study, a dynamic compartment model based on the food chain of marine biota, which can be used with easily obtainable ecological parameters, is presented to predict the activity concentration and dose rate of marine biota as a result of a nuclear. The model was applied to investigate a long-term effect of the Fukushima accident on the marine biota by using {sup 131}I, {sup 134}Cs, and {sup 137}Cs activity concentrations of seawater measured for up to about 2.5years after the accident in the port of FDNPS, which was known to be the most severely contaminated. A dynamic compartment model was presented to assess the activity concentration and whole body dose rate of marine biota, and was tested through the prediction of the activity concentration and dose rate of the marine biota using the seawater activities of {sup 131}I, {sup 134}Cs, and {sup 137}Cs measured after the accident at two locations in the port of the Fukushima Daiichi Nuclear Power Station (FDNPS), as a result the Fukushima nuclear accident that occurred on March 11, 2011. The prediction results showed the radiological effect on the population of the marine biota as a consequence of the accident was insignificant. This result is also valid for biota in a less contaminated offshore because the present assessment was made for the most highly contaminated area such as marine ecosystem in the port of FDNPS. Conclusively, the present dynamic model can be usefully applied to estimate the activity concentration and whole body dose rate of the marine biota as the consequence of a nuclear accident.

Isolation by environmental distance in mobile marine species: molecular ecology of franciscana dolphins at their southern range.

Science.gov (United States)

Mendez, Martin; Rosenbaum, Howard C; Subramaniam, Ajit; Yackulic, Charles; Bordino, Pablo

2010-06-01

The assessment of population structure is a valuable tool for studying the ecology of endangered species and drafting conservation strategies. As we enhance our understanding about the structuring of natural populations, it becomes important that we also understand the processes behind these patterns. However, there are few rigorous assessments of the influence of environmental factors on genetic patterns in mobile marine species. Given their dispersal capabilities and localized habitat preferences, coastal cetaceans are adequate study species for evaluating environmental effects on marine population structure. The franciscana dolphin, a rare coastal cetacean endemic to the Western South Atlantic, was studied to examine these issues. We analysed genetic data from the mitochondrial DNA and 12 microsatellite markers for 275 franciscana samples utilizing frequency-based, maximum-likelihood and Bayesian algorithms to assess population structure and migration patterns. This information was combined with 10 years of remote sensing environmental data (chlorophyll concentration, water turbidity and surface temperature). Our analyses show the occurrence of genetically isolated populations within Argentina, in areas that are environmentally distinct. Combined evidence of genetic and environmental structure suggests that isolation by distance and a process here termed isolation by environmental distance can explain the observed correlations. Our approach elucidated important ecological and conservation aspects of franciscana dolphins, and has the potential to increase our understanding of ecological processes influencing genetic patterns in other marine species.

137Cs activity and associated dose in the coastal marine environment of India

International Nuclear Information System (INIS)

Verma, G.P.; Sharma, D.N.; Jha, S.K.

2010-01-01

Coastal marine environment is important for India since a considerable percentage of the human population resides in coastal areas. Fallout radionuclides as well as non-radioactive substances have polluted the coastal marine environment of India. The introduction of 137 Cs, a fallout radionuclide, considered as global pollutant, into marine environment has created the need for marine environmental data. The main objective is to provide data on the present level of 137 Cs which is important from the standpoint of radiological health and dose associated with it. Such database will also provide benchmark which will be helpful in assessing the impact of additional contribution to marine radioactivity in the future. The results confirm that the mean annual individual dose from 137 Cs in seafood (fish) for the Indian subcontinent is 0.03 μSv. The highest annual individual dose for 137 Cs due to the ingestion offish is in the age group of 40 to 59 years which is due to the reason that the Indian annual dietary intake of fish is highest in this age group

AFSC/ABL: Southeast and Prince William Sound, Alaska Herring Microsatellite data, 2007-2008

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Herring is one of the most energy-rich fish in the Alaskan ecosystem, and when populations struggle over time, such as the Lynn Canal population, there is management...

Adaptation of Australia’s Marine Ecosystems to Climate Change: Using Science to Inform Conservation Management

OpenAIRE

Johnson, Johanna E.; Holbrook, Neil J.

2014-01-01

The challenges that climate change poses for marine ecosystems are already manifesting in impacts at the species, population, and community levels in Australia, particularly in Tasmania and tropical northern Australia. Many species and habitats are already under threat as a result of human activities, and the additional pressure from climate change significantly increases the challenge for marine conservation and management. Climate change impacts are expected to magnify as sea surface temper...

Marine megaherbivore grazing may increase seagrass tolerance to high nutrient loads

NARCIS (Netherlands)

Christianen, M.J.A.; Govers, L.L.; Bouma, T.J.; Kiswara, W.; Roelofs, J.G.M.; Lamers, L.P.M.; Van Katwijk, M.

2012-01-01

1.Populations of marine megaherbivores including green turtle (Chelonia mydas) have declined dramatically at a global scale as a result of overharvesting and habitat loss. This decline can be expected to also affect the tolerance of seagrass systems to coastal eutrophication. Until now, however,

Temperature-associated population diversity in salmon confers benefits to mobile consumers

Science.gov (United States)

Ruff, Casey P.; Schindle, Daniel E.; Armstrong, Jonathan B.; Bentle, Kale T.; Brooks, Gabriel T.; Holtgrieve, Gordon W.; McGlauflin, Molly T.; Torgersen, Christian E.; Seeb, James E.

2011-01-01

Habitat heterogeneity can generate intraspecific diversity through local adaptation of populations. While it is becoming increasingly clear that population diversity can increase stability in species abundance, less is known about how population diversity can benefit consumers that can integrate across population diversity in their prey. Here we demonstrate cascading effects of thermal heterogeneity on trout–salmon interactions in streams where rainbow trout rely heavily on the seasonal availability of anadromous salmon eggs. Water temperature in an Alaskan stream varied spatially from 5°C to 17.5°C, and spawning sockeye salmon showed population differentiation associated with this thermal heterogeneity. Individuals that spawned early in cool regions of the 5 km long stream were genetically differentiated from those spawning in warmer regions later in the season. Sockeye salmon spawning generates a pulsed resource subsidy that supports the majority of seasonal growth in stream-dwelling rainbow trout. The spatial and temporal structuring of sockeye salmon spawn timing in our focal stream extended the duration of the pulsed subsidy compared to a thermally homogeneous stream with a single population of salmon. Further, rainbow trout adopted movement strategies that exploited the multiple pulses of egg subsidies in the thermally heterogeneous stream. Fish that moved to track the resource pulse grew at rates about 2.5 times higher than those that remained stationary or trout in the reference stream with a single seasonal pulse of eggs. Our results demonstrate that habitat heterogeneity can have important effects on the population diversity of dominant species, and in turn, influence their value to species that prey upon them. Therefore, habitat homogenization may have farther-reaching ecological effects than previously considered.

Divergence and Adaptive Capacity of Marine Keystone Species

DEFF Research Database (Denmark)

Fietz, Katharina

A multitude of anthropogenic actions ranging from overexploitation, pollution, and eutrophication to the introduction of invasive species impact the marine environment today (Jansson & Dahlberg 1999; Islam & Tanaka 2004; Pauly et al. 2005; Molnar et al. 2008). In combination with rapid environmen......A multitude of anthropogenic actions ranging from overexploitation, pollution, and eutrophication to the introduction of invasive species impact the marine environment today (Jansson & Dahlberg 1999; Islam & Tanaka 2004; Pauly et al. 2005; Molnar et al. 2008). In combination with rapid...... and effective conservation actions. In this thesis, I took a population genetic approach to shed light on the above features of three different keystone organisms in the North Atlantic and Baltic Sea ecosystems. In Chapter 2, my colleagues and I combined modern and historic nuclear and mitochondrial genetic...

Population Parameters of Blainvilles and Cuviers Beaked Whales

Science.gov (United States)

2015-09-30

cetacean populations. Long-term monitoring of beaked whale populations in El Hierro , a nearly pristine habitat far from areas of sonar testing or...marine industry, enables valuable studies of demographic trends and life history dictated mainly by natural parameters. El Hierro is in process of...functioning (expected in 2018-2019), it is essential to continue monitoring the populations in El Hierro to obtain an uninterrupted long-term dataset of

Marine polar steroids

International Nuclear Information System (INIS)

Stonik, Valentin A

2001-01-01

Structures, taxonomic distribution and biological activities of polar steroids isolated from various marine organisms over the last 8-10 years are considered. The peculiarities of steroid biogenesis in the marine biota and their possible biological functions are discussed. Syntheses of some highly active marine polar steroids are described. The bibliography includes 254 references.

Population Connectivity Measures of Fishery-Targeted Coral Reef Species to Inform Marine Reserve Network Design in Fiji.

Science.gov (United States)

Eastwood, Erin K; López, Elora H; Drew, Joshua A

2016-01-25

Coral reef fish serve as food sources to coastal communities worldwide, yet are vulnerable to mounting anthropogenic pressures like overfishing and climate change. Marine reserve networks have become important tools for mitigating these pressures, and one of the most critical factors in determining their spatial design is the degree of connectivity among different populations of species prioritized for protection. To help inform the spatial design of an expanded reserve network in Fiji, we used rapidly evolving mitochondrial genes to investigate connectivity patterns of three coral reef species targeted by fisheries in Fiji: Epinephelus merra (Serranidae), Halichoeres trimaculatus (Labridae), and Holothuria atra (Holothuriidae). The two fish species, E. merra and Ha. trimaculatus, exhibited low genetic structuring and high amounts of gene flow, whereas the sea cucumber Ho. atra displayed high genetic partitioning and predominantly westward gene flow. The idiosyncratic patterns observed among these species indicate that patterns of connectivity in Fiji are likely determined by a combination of oceanographic and ecological characteristics. Our data indicate that in the cases of species with high connectivity, other factors such as representation or political availability may dictate where reserves are placed. In low connectivity species, ensuring upstream and downstream connections is critical.

Effects of simultaneous climate change and geomorphic evolution on thermal characteristics of a shallow Alaskan lake

Science.gov (United States)

Griffiths, Jennifer R.; Schindler, Daniel E.; Balistrieri, Laurie S.; Ruggerone, Gregory T.

2011-01-01

We used a hydrodynamics model to assess the consequences of climate warming and contemporary geomorphic evolution for thermal conditions in a large, shallow Alaskan lake. We evaluated the effects of both known climate and landscape change, including rapid outlet erosion and migration of the principal inlet stream, over the past 50 yr as well as future scenarios of geomorphic restoration. Compared to effects of air temperature during the past 50 yr, lake thermal properties showed little sensitivity to substantial (~60%) loss of lake volume, as the lake maximum depth declined from 6 m to 4 m driven by outlet erosion. The direction and magnitude of future lake thermal responses will be driven largely by the extent of inlet stream migration when it occurs simultaneously with outlet erosion. Maintaining connectivity with inlet streams had substantial effects on buffering lake thermal responses to warming climate. Failing to account for changing rates and types of geomorphic processes under continuing climate change may misidentify the primary drivers of lake thermal responses and reduce our ability to understand the consequences for aquatic organisms.

Distribution of Hanford reactor produced radionuclides in the marine environment, 1961-73

International Nuclear Information System (INIS)

Seymour, A.H.

1980-01-01

At Hanford (U.S.A.), the plutonium-producing reactors were in operation during 1944-1971. The period of maximum reactor operation was 1955-1965, when eight reactors were in operation. The reactor deactivation programme began in 1965 and the last reactor was deactivated in 1971. All these reactors were cooled by Columbia River water which passed through the reactors and then was discharged to the river and ultimately to the North Pacific. The Laboratory of Radiation Ecology (LRE) of the University of Washington started an environmental survey programme in 1965 and continued it upto 1973 i.e. even after the last plutonium producing reactor was deactivated. The programme objectives were: (1) to find the geographical distribution and concentration of Hanford produced radionuclides in water, sediments and biota of the marine environment, (2) to relate the operation of the Hanford reactors during the period of deactivation to the concentration of radionuclides in marine organisms, and (3) to observe the rate at which the marine organisms cleansed themselves of 65 Zn after the primary source had been removed. An account of the programme and highlights of the observations are reported. Most of the radioactivity entering the river water and marine organisms was due to 51 Cr, 65 Zn and 32 P of which 65 Zn was found to be the most abundant radionuclide in the biological samples. The rate of radioactivity from the river water entering into the Ocean was about 1000 curies per day and it did not produce any observable effects on populations of marine organisms. The internal dose to man from 65 Zn via seafoods was only a small fraction of the permissible dose for individual members of the population. (M.G.B.)

Radioactivity monitoring of the Irish marine environment 1993 to 1995

International Nuclear Information System (INIS)

Pollard, D.; Long, S.; Hayden, E.; Smith, V.; Ryan, T.P.; Dowdall, A.; McGarry, A.; Cunningham, J.D.

1996-10-01

This report presents the results of the marine radioactivity monitoring programme carried out by the Radiological Protection Institute of Ireland during the period 1993 to 1995. The principal objective of this programme is to assess the exposure to the Irish population arising from radioactive contamination in the Irish marine environment and to estimate the risks to human health arising from such exposure. In addition, the programme aims to assess the distribution of the significant contaminating radionuclides in the marine environment and to identify tends with a view to assessing possible future effects. The results show that by 1995 the mean concentration of caesium-137 in fish landed at north-east ports had fallen to 1.6 Bq/kg, from a figure of 68 Bq/kg in 1979-82 and 3.0 Bq/kg in 1993. A similar decline is evident for seawater, sediment and seaweed. In addition, the Irish Sea data show the progressive dilution of artificial radioactivity with increasing distance from Sellafield

An assessment of natural product discovery from marine (sensu strictu) and marine-derived fungi

Science.gov (United States)

Overy, David P.; Bayman, Paul; Kerr, Russell G.; Bills, Gerald F.

2014-01-01

The natural products community has been investigating secondary metabolites from marine fungi for several decades, but when one attempts to search for validated reports of new natural products from marine fungi, one encounters a literature saturated with reports from ‘marine-derived’ fungi. Of the 1000+ metabolites that have been characterized to date, only approximately 80 of these have been isolated from species from exclusively marine lineages. These metabolites are summarized here along with the lifestyle and habitats of their producing organisms. Furthermore, we address some of the reasons for the apparent disconnect between the stated objectives of discovering new chemistry from marine organisms and the apparent neglect of the truly exceptional obligate marine fungi. We also offer suggestions on how to reinvigorate enthusiasm for marine natural products discovery from fungi from exclusive marine lineages and highlight the need for critically assessing the role of apparently terrestrial fungi in the marine environment. PMID:25379338

Linkages between Alaskan sockeye salmon abundance, growth at sea, and climate, 1955-2002

Science.gov (United States)

Ruggerone, G.T.; Nielsen, J.L.; Bumgarner, J.

2007-01-01

We tested the hypothesis that increased growth of salmon during early marine life contributed to greater survival and abundance of salmon following the 1976/1977 climate regime shift and that this, in turn, led to density-dependent reductions in growth during late marine stages. Annual measurements of Bristol Bay (Bering Sea) and Chignik (Gulf of Alaska) sockeye salmon scale growth from 1955 to 2002 were used as indices of body growth. During the first and second years at sea, growth of both stocks tended to be higher after the 1976-1977 climate shift, whereas growth during the third year and homeward migration was often below average. Multiple regression models indicated that return per spawner of Bristol Bay sockeye salmon and adult abundance of western and central Alaska sockeye salmon were positively correlated with growth during the first 2 years at sea and negatively correlated with growth during later life stages. After accounting for competition between Bristol Bay sockeye and Asian pink salmon, age-specific adult length of Bristol Bay salmon increased after the 1976-1977 regime shift, then decreased after the 1989 climate shift. Late marine growth and age-specific adult length of Bristol Bay salmon was exceptionally low after 1989, possibly reducing their reproductive potential. These findings support the hypothesis that greater marine growth during the first 2 years at sea contributed to greater salmon survival and abundance, which in turn led to density-dependent growth during later life stages when size-related mortality was likely lower. Our findings provide new evidence supporting the importance of bottom-up control in marine ecosystems and highlight the complex dynamics of species interactions that continually change as salmon grow and mature in the ocean. ?? 2007 Elsevier Ltd. All rights reserved.

Mechanisms driving recruitment variability in fish: comparisons between the Laurentian Great Lakes and marine systems

Science.gov (United States)

Pritt, Jeremy J.; Roseman, Edward F.; O'Brien, Timothy P.

2014-01-01

In his seminal work, Hjort (in Fluctuations in the great fisheries of Northern Europe. Conseil Parmanent International Pour L'Exploration De La Mar. Rapports et Proces-Verbaux, 20: 1–228, 1914) observed that fish population levels fluctuated widely, year-class strength was set early in life, and egg production by adults could not alone explain variability in year-class strength. These observations laid the foundation for hypotheses on mechanisms driving recruitment variability in marine systems. More recently, researchers have sought to explain year-class strength of important fish in the Laurentian Great Lakes and some of the hypotheses developed for marine fisheries have been transferred to Great Lakes fish. We conducted a literature review to determine the applicability of marine recruitment hypotheses to Great Lakes fish. We found that temperature, interspecific interactions, and spawner effects (abundance, age, and condition of adults) were the most important factors in explaining recruitment variability in Great Lakes fish, whereas relatively fewer studies identified bottom-up trophodynamic factors or hydrodynamic factors as important. Next, we compared recruitment between Great Lakes and Baltic Sea fish populations and found no statistical difference in factors driving recruitment between the two systems, indicating that recruitment hypotheses may often be transferable between Great Lakes and marine systems. Many recruitment hypotheses developed for marine fish have yet to be applied to Great Lakes fish. We suggest that future research on recruitment in the Great Lakes should focus on forecasting the effects of climate change and invasive species. Further, because the Great Lakes are smaller and more enclosed than marine systems, and have abundant fishery-independent data, they are excellent candidates for future hypothesis testing on recruitment in fish.

Waste production and regional growth of marine activities an econometric model.

Science.gov (United States)

Bramati, Maria Caterina

2016-11-15

Coastal regions are characterized by intense human activity and climatic pressures, often intensified by competing interests in the use of marine waters. To assess the effect of public spending on the regional economy, an econometric model is here proposed. Not only are the regional investment and the climatic risks included in the model, but also variables related to the anthropogenic pressure, such as population, economic activities and waste production. Feedback effects of economic and demographic expansion on the pollution of coastal areas are also considered. It is found that dangerous waste increases with growing shipping and transportation activities and with growing population density in non-touristic coastal areas. On the other hand, the amount of non-dangerous wastes increases with marine mining, defense and offshore energy production activities. However, lower waste production occurs in areas where aquaculture and touristic industry are more exploited, and accompanied by increasing regional investment in waste disposal. Copyright © 2016 Elsevier Ltd. All rights reserved.

Glacial and tectonic influence on terrestrial organic carbon delivery to high latitude deep marine systems: IODP Site U1417, Surveyor Fan, Gulf of Alaska

Science.gov (United States)

Childress, L. B.; Ridgway, K. D.

2014-12-01

Glacial and tectonic processes on active margins are intrinsically coupled to the transport of sediment and associated organic carbon (OC). Glaciation/deglaciation and the formation of ice sheets can alter the quantity and composition of OC delivered to the marine environment. Over geologic time scales (>1 Ma), exhumation and mass wasting of sedimentary rock from uplifted accretionary wedges inject recycled OC (e.g. kerogen), along with modern OC into the marine environment. The sedimentary record of glacial and tectonic processes along the southern Alaska margin is particularly well preserved at Integrated Ocean Drilling Program (IODP) Site U1417. Lithofacies of Site U1417 can be divided into 3 sedimentary packages that we interpret as linked to the onset of tidewater glaciation along, and tectonic convergence of the Yakutat Terrane with, the continental margin of northwestern Canada and southern Alaska. Based on previous studies linking the development of the Cordilleran Ice Sheet and the movement of the Yakutat Terrane to the development of the Surveyor Fan System, we hypothesize biogeochemical variations in the deposited sediments as a result of changing provenance. Preservation of terrestrial OC that has been documented in sediments of the Alaskan continental shelf margin and sediment routing through the deep-sea Surveyor Channel from the Pleistocene to modern time implies a long-term conduit for this OC to reach the distal portion of the Surveyor Fan system. To correlate marine deposits with terrestrial formations, bulk geochemical and detailed biomarker analyses are used to delineate source material. Preliminary bulk OC content and stable carbon isotope analyses of the Yakataga, Poul Creek, and Kultheith Fms. reveal notable differences. Detailed biomarker analysis by pyrolysis-gas chromatograph-mass spectrometry has revealed further differences between the three primary formations. Using the biogeochemical fingerprints of the Yakataga, Poul Creek, and coal

Monitoring ship noise to assess the impact of coastal developments on marine mammals.

Science.gov (United States)

Merchant, Nathan D; Pirotta, Enrico; Barton, Tim R; Thompson, Paul M

2014-01-15

The potential impacts of underwater noise on marine mammals are widely recognised, but uncertainty over variability in baseline noise levels often constrains efforts to manage these impacts. This paper characterises natural and anthropogenic contributors to underwater noise at two sites in the Moray Firth Special Area of Conservation, an important marine mammal habitat that may be exposed to increased shipping activity from proposed offshore energy developments. We aimed to establish a pre-development baseline, and to develop ship noise monitoring methods using Automatic Identification System (AIS) and time-lapse video to record trends in noise levels and shipping activity. Our results detail the noise levels currently experienced by a locally protected bottlenose dolphin population, explore the relationship between broadband sound exposure levels and the indicators proposed in response to the EU Marine Strategy Framework Directive, and provide a ship noise assessment toolkit which can be applied in other coastal marine environments. Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

The 3.6 ka Aniakchak tephra in the Arctic Ocean: a constraint on the Holocene radiocarbon reservoir age in the Chukchi Sea

Science.gov (United States)

Pearce, Christof; Varhelyi, Aron; Wastegård, Stefan; Muschitiello, Francesco; Barrientos, Natalia; O'Regan, Matt; Cronin, Thomas M.; Gemery, Laura; Semiletov, Igor; Backman, Jan; Jakobsson, Martin

2017-04-01

The caldera-forming eruption of the Aniakchak volcano in the Aleutian Range on the Alaskan Peninsula at 3.6 cal kyr BP was one of the largest Holocene eruptions worldwide. The resulting ash is found as a visible sediment layer in several Alaskan sites and as a cryptotephra on Newfoundland and Greenland. This large geographic distribution, combined with the fact that the eruption is relatively well constrained in time using radiocarbon dating of lake sediments and annual layer counts in ice cores, makes it an excellent stratigraphic marker for dating and correlating mid-late Holocene sediment and paleoclimate records. This study presents the outcome of a targeted search for the Aniakchak tephra in a marine sediment core from the Arctic Ocean, namely Core SWERUS-L2-2-PC1 (2PC), raised from 57 m water depth in Herald Canyon, western Chukchi Sea. High concentrations of tephra shards, with a geochemical signature matching that of Aniakchak ash, were observed across a more than 1.5 m long sediment sequence. Since the primary input of volcanic ash is through atmospheric transport, and assuming that bioturbation can account for mixing up to ca. 10 cm of the marine sediment deposited at the coring site, the broad signal is interpreted as sustained reworking at the sediment source input. The isochron is therefore placed at the base of the sudden increase in tephra concentrations rather than at the maximum concentration. This interpretation of major reworking is strengthened by analysis of grain size distribution which points to ice rafting as an important secondary transport mechanism of volcanic ash. Combined with radiocarbon dates on mollusks in the same sediment core, the volcanic marker is used to calculate a marine radiocarbon reservoir age offset ΔR = 477 ± 60 years. This relatively high value may be explained by the major influence of typically carbon-old Pacific waters, and it agrees well with recent estimates of ΔR along the northwest Alaskan coast, possibly

AFSC/REFM: Alaskan yellowfin sole extended chronology Black et al 2013

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Annual growth increment patterns observed in the hard parts of many marine organisms are often related to factors in the physical environment, and investigators are...

Impact of marine reserve on maximum sustainable yield in a traditional prey-predator system

Science.gov (United States)

Paul, Prosenjit; Kar, T. K.; Ghorai, Abhijit

2018-01-01

Multispecies fisheries management requires managers to consider the impact of fishing activities on several species as fishing impacts both targeted and non-targeted species directly or indirectly in several ways. The intended goal of traditional fisheries management is to achieve maximum sustainable yield (MSY) from the targeted species, which on many occasions affect the targeted species as well as the entire ecosystem. Marine reserves are often acclaimed as the marine ecosystem management tool. Few attempts have been made to generalize the ecological effects of marine reserve on MSY policy. We examine here how MSY and population level in a prey-predator system are affected by the low, medium and high reserve size under different possible scenarios. Our simulation works shows that low reserve area, the value of MSY for prey exploitation is maximum when both prey and predator species have fast movement rate. For medium reserve size, our analysis revealed that the maximum value of MSY for prey exploitation is obtained when prey population has fast movement rate and predator population has slow movement rate. For high reserve area, the maximum value of MSY for prey's exploitation is very low compared to the maximum value of MSY for prey's exploitation in case of low and medium reserve. On the other hand, for low and medium reserve area, MSY for predator exploitation is maximum when both the species have fast movement rate.

Marine ecosystem analysis for wolsung nuclear power plant

International Nuclear Information System (INIS)

Lee, J.H.; Kim, Y.H.; Cho, T.J.

1982-01-01

Environmental surveys to provide base-line data for assessing the potential impact of the operation of Wolseong NPP on marine ecosystems were performed at 3-month intervals in 1981. Physico-chemical properties of seawater and gross beta activities in seawater and marine organisms were examined. The result shows that the ecosystems are non-polluted, typical of near-shore waters. The results of ecological surveys are summarized as follows: A total of 84 taxa of phytoplankton diatom were identified. Of the species, about 70 % are described as neritic species, and the major bloom occurred in September. The analysis of diversity indices shows that the community is very stable. The dominant species of zooplankton were protozoan Noctiluca scintillans and copepods. A total of 83 species of marine algae were identified. The algal community was more diverse in September-December than in March-July, and the dominant species were Chondria crassicaulis and Corallina pilulifera. Total algal production per unit area (0.25 m 2 ) was, on the average, 20 g-dry. The biomass of bacterial population was highest in December, and the result of multiple regression analysis indicates that the important environmental factors are nutrients, salinity and temperature. Primary productivities measured by Carbon-14 method were 1.11 mg C/m 3 /hr at 1 m depth, and 1.45 mg C/m 3 /hr at 6 m depth. As a whole the marine ecosystems adjacent Wolseong NPP site are thought to be stable. (author)

Carotenoids in Marine Animals

Science.gov (United States)

Maoka, Takashi

2011-01-01

Marine animals contain various carotenoids that show structural diversity. These marine animals accumulate carotenoids from foods such as algae and other animals and modify them through metabolic reactions. Many of the carotenoids present in marine animals are metabolites of β-carotene, fucoxanthin, peridinin, diatoxanthin, alloxanthin, and astaxanthin, etc. Carotenoids found in these animals provide the food chain as well as metabolic pathways. In the present review, I will describe marine animal carotenoids from natural product chemistry, metabolism, food chain, and chemosystematic viewpoints, and also describe new structural carotenoids isolated from marine animals over the last decade. PMID:21566799

Tissue specific haemoglobin gene expression suggests adaptation to local marine conditions in North Sea flounder (Platichthys flesus L.)

DEFF Research Database (Denmark)

Larsen, P.F.; Eg Nielsen, Einar; Hansen, M.M.

2013-01-01

Recent genetic analyses of candidate genes and gene expression in marine fishes have provided evidence of local adaptation in response to environmental differences, despite the lack of strong signals of population structure from conventional neutral genetic markers. In this study expression...... in flounder. In gill tissue a plastic response to salinity treatments was observed with general up-regulation of these genes concomitant with higher salinity. For liver tissue a population specific expression differences was observed with lower expression at simulated non-native compared to native salinities...... in high gene flow marine fishes. © 2013 The Genetics Society of Korea...

Marine Biomedicine

Science.gov (United States)

Bang, Frederik B.

1977-01-01

Describes early scientific research involving marine invertebrate pathologic processes that may have led to new insights into human disease. Discussed are inquiries of Metchnikoff, Loeb, and Cantacuzene (immunolgic responses in sea stars, horseshoe crabs, and marine worms, respectively). Describes current research stemming from these early…

Marine Biology

Science.gov (United States)

Dewees, Christopher M.; Hooper, Jon K.

1976-01-01

A variety of informational material for a course in marine biology or oceanology at the secondary level is presented. Among the topics discussed are: food webs and pyramids, planktonic blooms, marine life, plankton nets, food chains, phytoplankton, zooplankton, larval plankton and filter feeders. (BT)

Waste production and regional growth of marine activities an econometric model

International Nuclear Information System (INIS)

Bramati, Maria Caterina

2016-01-01

Coastal regions are characterized by intense human activity and climatic pressures, often intensified by competing interests in the use of marine waters. To assess the effect of public spending on the regional economy, an econometric model is here proposed. Not only are the regional investment and the climatic risks included in the model, but also variables related to the anthropogenic pressure, such as population, economic activities and waste production. Feedback effects of economic and demographic expansion on the pollution of coastal areas are also considered. It is found that dangerous waste increases with growing shipping and transportation activities and with growing population density in non-touristic coastal areas. On the other hand, the amount of non-dangerous wastes increases with marine mining, defense and offshore energy production activities. However, lower waste production occurs in areas where aquaculture and touristic industry are more exploited, and accompanied by increasing regional investment in waste disposal. - Highlights: • We use an econometric model as a tool for assessing the effects of regional policies on the development of economic activities related to the use of the sea and on the impact on the marine environment. • Through scenario simulation we provide strategic guidelines for policy makers and economic planners • The model features feedback effects of economic and demographic expansion on the pollution of coastal areas.

Circumpolar dynamics of a marine top-predator track ocean warming rates.

Science.gov (United States)

Descamps, Sébastien; Anker-Nilssen, Tycho; Barrett, Robert T; Irons, David B; Merkel, Flemming; Robertson, Gregory J; Yoccoz, Nigel G; Mallory, Mark L; Montevecchi, William A; Boertmann, David; Artukhin, Yuri; Christensen-Dalsgaard, Signe; Erikstad, Kjell-Einar; Gilchrist, H Grant; Labansen, Aili L; Lorentsen, Svein-Håkon; Mosbech, Anders; Olsen, Bergur; Petersen, Aevar; Rail, Jean-Francois; Renner, Heather M; Strøm, Hallvard; Systad, Geir H; Wilhelm, Sabina I; Zelenskaya, Larisa

2017-09-01

Global warming is a nonlinear process, and temperature may increase in a stepwise manner. Periods of abrupt warming can trigger persistent changes in the state of ecosystems, also called regime shifts. The responses of organisms to abrupt warming and associated regime shifts can be unlike responses to periods of slow or moderate change. Understanding of nonlinearity in the biological responses to climate warming is needed to assess the consequences of ongoing climate change. Here, we demonstrate that the population dynamics of a long-lived, wide-ranging marine predator are associated with changes in the rate of ocean warming. Data from 556 colonies of black-legged kittiwakes Rissa tridactyla distributed throughout its breeding range revealed that an abrupt warming of sea-surface temperature in the 1990s coincided with steep kittiwake population decline. Periods of moderate warming in sea temperatures did not seem to affect kittiwake dynamics. The rapid warming observed in the 1990s may have driven large-scale, circumpolar marine ecosystem shifts that strongly affected kittiwakes through bottom-up effects. Our study sheds light on the nonlinear response of a circumpolar seabird to large-scale changes in oceanographic conditions and indicates that marine top predators may be more sensitive to the rate of ocean warming rather than to warming itself. © 2017 John Wiley & Sons Ltd.

Complementary approaches to diagnosing marine diseases: a union of the modern and the classic

Science.gov (United States)

Burge, Colleen A.; Friedman, Carolyn S.; Getchell, Rodman G.; House, Marcia; Lafferty, Kevin D.; Mydlarz, Laura D.; Prager, Katherine C.; Sutherland, Kathryn P.; Renault, Tristan; Kiryu, Ikunari; Vega-Thurber, Rebecca

2016-01-01

Linking marine epizootics to a specific aetiology is notoriously difficult. Recent diagnostic successes show that marine disease diagnosis requires both modern, cutting-edge technology (e.g. metagenomics, quantitative real-time PCR) and more classic methods (e.g. transect surveys, histopathology and cell culture). Here, we discuss how this combination of traditional and modern approaches is necessary for rapid and accurate identification of marine diseases, and emphasize how sole reliance on any one technology or technique may lead disease investigations astray. We present diagnostic approaches at different scales, from the macro (environment, community, population and organismal scales) to the micro (tissue, organ, cell and genomic scales). We use disease case studies from a broad range of taxa to illustrate diagnostic successes from combining traditional and modern diagnostic methods. Finally, we recognize the need for increased capacity of centralized databases, networks, data repositories and contingency plans for diagnosis and management of marine disease.

Modeling Fire Severity in Black Spruce Stands in the Alaskan Boreal Forest Using Spectral and Non-Spectral Geospatial Data

Science.gov (United States)

Barrett, K.; Kasischke, E. S.; McGuire, A. D.; Turetsky, M. R.; Kane, E. S.

2010-01-01

Biomass burning in the Alaskan interior is already a major disturbance and source of carbon emissions, and is likely to increase in response to the warming and drying predicted for the future climate. In addition to quantifying changes to the spatial and temporal patterns of burned areas, observing variations in severity is the key to studying the impact of changes to the fire regime on carbon cycling, energy budgets, and post-fire succession. Remote sensing indices of fire severity have not consistently been well-correlated with in situ observations of important severity characteristics in Alaskan black spruce stands, including depth of burning of the surface organic layer. The incorporation of ancillary data such as in situ observations and GIS layers with spectral data from Landsat TM/ETM+ greatly improved efforts to map the reduction of the organic layer in burned black spruce stands. Using a regression tree approach, the R2 of the organic layer depth reduction models was 0.60 and 0.55 (pb0.01) for relative and absolute depth reduction, respectively. All of the independent variables used by the regression tree to estimate burn depth can be obtained independently of field observations. Implementation of a gradient boosting algorithm improved the R2 to 0.80 and 0.79 (pb0.01) for absolute and relative organic layer depth reduction, respectively. Independent variables used in the regression tree model of burn depth included topographic position, remote sensing indices related to soil and vegetation characteristics, timing of the fire event, and meteorological data. Post-fire organic layer depth characteristics are determined for a large (N200,000 ha) fire to identify areas that are potentially vulnerable to a shift in post-fire succession. This application showed that 12% of this fire event experienced fire severe enough to support a change in post-fire succession. We conclude that non-parametric models and ancillary data are useful in the modeling of the surface

Active Marine Station Metadata

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The Active Marine Station Metadata is a daily metadata report for active marine bouy and C-MAN (Coastal Marine Automated Network) platforms from the National Data...

Collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure

Science.gov (United States)

Adams, Josh; Kelsey, Emily C.; Felis, Jonathan J.; Pereksta, David M.

2016-10-27

With growing climate change concerns and energy constraints, there is an increasing need for renewable energy sources within the United States and globally. Looking forward, offshore wind-energy infrastructure (OWEI) has the potential to produce a significant proportion of the power needed to reach our Nation’s renewable energy goal. Offshore wind-energy sites can capitalize open areas within Federal waters that have persistent, high winds with large energy production potential. Although there are few locations in the California Current System (CCS) where it would be acceptable to build pile-mounted wind turbines in waters less than 50 m deep, the development of technology able to support deep-water OWEI (>200 m depth) could enable wind-energy production in the CCS. As with all human-use of the marine environment, understanding the potential impacts of wind-energy infrastructure on the marine ecosystem is an integral part of offshore wind-energy research and planning. Herein, we present a comprehensive database to quantify marine bird vulnerability to potential OWEI in the CCS (see https://doi.org/10.5066/F79C6VJ0). These data were used to quantify marine bird vulnerabilities at the population level. For 81 marine bird species present in the CCS, we created three vulnerability indices: Population Vulnerability, Collision Vulnerability, and Displacement Vulnerability. Population Vulnerability was used as a scaling factor to generate two comprehensive indicies: Population Collision Vulnerability (PCV) and Population Displacement Vulnerability (PDV). Within the CCS, pelicans, terns (Forster’s [Sterna forsteri], Caspian [Hydroprogne caspia], Elegant [Thalasseus elegans], and Least Tern [Sternula antillarum]), gulls (Western [Larus occidentalis] and Bonaparte’s Gull [Chroicocephalus philadelphia]), South Polar Skua (Stercorarius maccormicki), and Brandt’s Cormorant (Phalacrocorax penicillatus) had the greatest PCV scores. Brown Pelican (Pelicanus occidentalis

Characterizing Marine Soundscapes.

Science.gov (United States)

Erbe, Christine; McCauley, Robert; Gavrilov, Alexander

2016-01-01

The study of marine soundscapes is becoming widespread and the amount of data collected is increasing rapidly. Data owners (typically academia, industry, government, and defense) are negotiating data sharing and generating potential for data syntheses, comparative studies, analyses of trends, and large-scale and long-term acoustic ecology research. A problem is the lack of standards and commonly agreed protocols for the recording of marine soundscapes, data analysis, and reporting that make a synthesis and comparison of results difficult. We provide a brief overview of the components in a marine soundscape, the hard- and software tools for recording and analyzing marine soundscapes, and common reporting formats.

Procedure for studying population genetic aspects of marine organisms using biochemical techniques

Digital Repository Service at National Institute of Oceanography (India)

Menezes, M.R.

~d~raJnlngonTa.~ono"",~n~llcsand(dn~Banking ~fC(J4S,alandMann~Blo,"sources, ClFE, MumOOI --- vacuum is applied to eliminate air bubbles and this hot solution is then poured into a plastic trough on a 3 mm glass plate. Then the gel is covered with a plastic wrap and cooled to room temperature... then placed firmly together as before cutting. 187 NBDBlDBT Sponsored Training on Taxonomy, Omelia and Gene Banking o/Coastal and Marine Bloresources, ClFE, Mumbal - Electrode tray containing 300 ml of buffer in each side was used T\\. . lne starch-gel block...

Carotenoids in Marine Animals

OpenAIRE

Maoka, Takashi

2011-01-01

Marine animals contain various carotenoids that show structural diversity. These marine animals accumulate carotenoids from foods such as algae and other animals and modify them through metabolic reactions. Many of the carotenoids present in marine animals are metabolites of β-carotene, fucoxanthin, peridinin, diatoxanthin, alloxanthin, and astaxanthin, etc. Carotenoids found in these animals provide the food chain as well as metabolic pathways. In the present review, I will describe marine a...

Marine Science

African Journals Online (AJOL)

Aims and scope: The Western Indian Ocean Journal of Marine Science provides an avenue for the wide dissem- ination of high ... or by any means without permission in writing from the copyright holder. ..... Journal of Chemical Engineering Research and Design 82 ... Indian Ocean Marine Science Association Technical.

Contribution of offshore petroleum deposits to marine food chain

Science.gov (United States)

Mori, S.

2009-12-01

Petroleum production out of offshore petroleum deposits often coincides with abundant fisheries in the world. Superposition of marine microorganism concentration distribution and offshore petroleum field distribution from various data in the literature provides to prove this coincidence. Sakhalin Island coastal regions, North Sea, Gulf of Mexico, etc. are chosen for the superpositions. Significant conformity is observed between the plankton concentration distribution and the offshore petroleum deposit distribution in all those regions. Also, most studies on the consequence of oil spills to marine eco-systems have focused mainly on hazardous marine pollution caused by spilled petroleum at high concentration in marine environment. However, some of those data clearly indicate stimulation of plankton population in properly low concentration levels of dissolved hydrocarbons and dissolved petroleum compositions. Further, increase of hydrocarbon concentration leads to its inhibition from its stimulation conditions upon crossing over a critical concentration level—a plankton stimulation/inhibition threshold concentration (SITC) of hydrocarbons. The SITC varies depending on hydrocarbon compounds, petroleum compositions, and microorganisms such as planktons. Further, petroleum composition diffusing through subterranean layers from petroleum deposits reacts with dissolved oxygen to be consumed at the ocean floor to precipitate the agglomerate suspension of hydrocarbons, leaving the sea water in a condition of oxygen depletion on the ocean floor. Such incidents are also briefly discussed.Plankton stimulation/inhibition threshold concentration of petroleum fractions

Global research priorities to mitigate plastic pollution impacts on marine wildlife

Science.gov (United States)

Vegter, Amanda C.; Barletta, Mário; Beck, Cathy A.; Borrero, Jose C.; Burton, Harry; Campbell, Marnie L.; Costa, Monica F.; Eriksen, Marcus; Eriksson, Cecilia; Estrades, Andres; Gilardi, Kirsten V.; Hardesty, Britta D.; do Sul, Juliana A. Ivar; Lavers, Jennifer L.; Lazar, Bojan; Lebreton, Laurent; Nichols, Wallace J.; Ribic, Christine A.; Ryan, Peter G.; Schuyler, Qamar A.; Smith, Stephen D. A.; Takada, Hideshige; Townsend, Kathy A.; Wabnitz, Colette C. C.; Wilcox, Chris; Young, Lindsay C.; Hamann, Mark

2014-01-01

Marine wildlife faces a growing number of threats across the globe, and the survival of many species and populations will be dependent on conservation action. One threat in particular that has emerged over the last 4 decades is the pollution of oceanic and coastal habitats with plastic debris. The increased occurrence of plastics in marine ecosystems mirrors the increased prevalence of plastics in society, and reflects the high durability and persistence of plastics in the environment. In an effort to guide future research and assist mitigation approaches to marine conservation, we have generated a list of 16 priority research questions based on the expert opinions of 26 researchers from around the world, whose research expertise spans several disciplines, and covers each of the world’s oceans and the taxa most at risk from plastic pollution. This paper highlights a growing concern related to threats posed to marine wildlife from microplastics and fragmented debris, the need for data at scales relevant to management, and the urgent need to develop interdisciplinary research and management partnerships to limit the release of plastics into the environment and curb the future impacts of plastic pollution.

Black Sea ecology. Pollution research in Turkey of the marine environment

International Nuclear Information System (INIS)

Topcuoglu, Sayhan

2000-01-01

Scientific research is leading to answers that can help protect the Black Sea marine environment. Through projects supported by the IAEA and other cooperative channels, countries in the Black Sea region are applying their expertise and capabilities to expand scientific knowledge of chemical and radioactive pollution. Turkey stands among the countries engaged in studies of the Black Sea, for a number of reasons related to environmental, economic, and health issues. Our scientific knowledge of pollution problems in the marine environment promises to expand in years ahead. Advances in the integration of biokinetic, ecotoxicology and risk analysis with environmental monitoring studies could make it possible to eventually determine the sensitivity to pollutants of human populations and marine organisms. Such integrated studies are being conducted by the Radioecology Laboratory of Cekmece Nuclear Research and Training Center (CNAEM) in Turkey. The Laboratory has gained considerable experience over the years, including through its collaboration since 1970 with the IAEA's Marine Environment Laboratory (MEL) in Monaco. Agency technical cooperation projects and research programmes additionally have benefited the laboratory. This article highlights selected Turkish studies of the Black Sea related to both radioactive and chemical pollution

Marine animal stings or bites

Science.gov (United States)

Stings - marine animals; Bites - marine animals ... Things you can do to prevent a marine animal sting or bite include: Swim near a lifeguard. Observe posted signs that may warn of danger from jellyfish or other hazardous marine life. ...

Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status

KAUST Repository

Danovaro, Roberto; Carugati, Laura; Berzano, Marco; Cahill, Abigail E.; Carvalho, Susana; Chenuil, Anne; Corinaldesi, Cinzia; Cristina, Sonia; David, Romain; Dell'Anno, Antonio; Dzhembekova, Nina; Garcé s, Esther; Gasol, Joseph M.; Goela, Priscila; Fé ral, Jean-Pierre; Ferrera, Isabel; Forster, Rodney M.; Kurekin, Andrey A.; Rastelli, Eugenio; Marinova, Veselka; Miller, Peter I.; Moncheva, Snejana; Newton, Alice; Pearman, John K.; Pitois, Sophie G.; Reñ é , Albert; Rodrí guez-Ezpeleta, Naiara; Saggiomo, Vincenzo; Simis, Stefan G. H.; Stefanova, Kremena; Wilson, Christian; Lo Martire, Marco; Greco, Silvestro; Cochrane, Sabine K. J.; Mangoni, Olga; Borja, Angel

2016-01-01

Marine environmental monitoring has tended to focus on site-specific methods of investigation. These traditional methods have low spatial and temporal resolution and are relatively labor intensive per unit area/time that they cover. To implement the Marine Strategy Framework Directive (MSFD), European Member States are required to improve marine monitoring and design monitoring networks. This can be achieved by developing and testing innovative and cost-effective monitoring systems, as well as indicators of environmental status. Here, we present several recently developed methodologies and technologies to improve marine biodiversity indicators and monitoring methods. The innovative tools are discussed concerning the technologies presently utilized as well as the advantages and disadvantages of their use in routine monitoring. In particular, the present analysis focuses on: (i) molecular approaches, including microarray, Real Time quantitative PCR (qPCR), and metagenetic (metabarcoding) tools; (ii) optical (remote) sensing and acoustic methods; and (iii) in situ monitoring instruments. We also discuss their applications in marine monitoring within the MSFD through the analysis of case studies in order to evaluate their potential utilization in future routine marine monitoring. We show that these recently-developed technologies can present clear advantages in accuracy, efficiency and cost.

Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status

KAUST Repository

Danovaro, Roberto

2016-11-23

Marine environmental monitoring has tended to focus on site-specific methods of investigation. These traditional methods have low spatial and temporal resolution and are relatively labor intensive per unit area/time that they cover. To implement the Marine Strategy Framework Directive (MSFD), European Member States are required to improve marine monitoring and design monitoring networks. This can be achieved by developing and testing innovative and cost-effective monitoring systems, as well as indicators of environmental status. Here, we present several recently developed methodologies and technologies to improve marine biodiversity indicators and monitoring methods. The innovative tools are discussed concerning the technologies presently utilized as well as the advantages and disadvantages of their use in routine monitoring. In particular, the present analysis focuses on: (i) molecular approaches, including microarray, Real Time quantitative PCR (qPCR), and metagenetic (metabarcoding) tools; (ii) optical (remote) sensing and acoustic methods; and (iii) in situ monitoring instruments. We also discuss their applications in marine monitoring within the MSFD through the analysis of case studies in order to evaluate their potential utilization in future routine marine monitoring. We show that these recently-developed technologies can present clear advantages in accuracy, efficiency and cost.

Snellius II as a policy instrument for marine capacity building

NARCIS (Netherlands)

Stel, J.H.

2001-01-01

Indonesia is the largest archipelago in the world (1.8 million km2 of land, 3.1 million km2 of sea, plus a 200 miles Exclusive Economic Zone covering some 2.7 million km2). Its population, ranking number four on the world list, amounts to more than 216 million people. Marine related programmes are

Extraordinary aggressive behavior from the giant coral reef fish, Bolbometopon muricatum, in a remote marine reserve.

Directory of Open Access Journals (Sweden)

Roldan C Muñoz

Full Text Available Human impacts to terrestrial and marine communities are widespread and typically begin with the local extirpation of large-bodied animals. In the marine environment, few pristine areas relatively free of human impact remain to provide baselines of ecosystem function and goals for restoration efforts. Recent comparisons of remote and/or protected coral reefs versus impacted sites suggest remote systems are dominated by apex predators, yet in these systems the ecological role of non-predatory, large-bodied, highly vulnerable species such as the giant bumphead parrotfish (Bolbometopon muricatum has received less attention. Overfishing of Bolbometopon has lead to precipitous declines in population density and avoidance of humans throughout its range, contributing to its status as a candidate species under the U. S. Endangered Species Act and limiting opportunities to study unexploited populations. Here we show that extraordinary ecological processes, such as violent headbutting contests by the world's largest parrotfish, can be revealed by studying unexploited ecosystems, such as the coral reefs of Wake Atoll where we studied an abundant population of Bolbometopon. Bolbometopon is among the largest of coral reef fishes and is a well known, charismatic species, yet to our knowledge, no scientific documentation of ritualized headbutting exists for marine fishes. Our observations of aggressive headbutting by Bolbometopon underscore that remote locations and marine reserves, by inhibiting negative responses to human observers and by allowing the persistence of historical conditions, can provide valuable opportunities to study ecosystems in their natural state, thereby facilitating the discovery, conservation, and interpretation of a range of sometimes remarkable behavioral and ecological processes.

Evolution of movement rate increases the effectiveness of marine reserves for the conservation of pelagic fishes.

Science.gov (United States)

Mee, Jonathan A; Otto, Sarah P; Pauly, Daniel

2017-06-01

Current debates about the efficacy of no-take marine reserves (MR) in protecting large pelagic fish such as tuna and sharks have usually not considered the evolutionary dimension of this issue, which emerges because the propensity to swim away from a given place, like any other biological trait, will probably vary in a heritable fashion among individuals. Here, based on spatially explicit simulations, we investigated whether selection to remain in MRs to avoid higher fishing mortality can lead to the evolution of more philopatric fish. Our simulations, which covered a range of life histories among tuna species (skipjack tuna vs. Atlantic bluefin tuna) and shark species (great white sharks vs. spiny dogfish), suggested that MRs were most effective at maintaining viable population sizes when movement distances were lowest. Decreased movement rate evolved following the establishment of marine reserves, and this evolution occurred more rapidly with higher fishing pressure. Evolutionary reductions in movement rate led to increases in within-reserve population sizes over the course of the 50 years following MR establishment, although this varied among life histories, with skipjack responding fastest and great white sharks slowest. Our results suggest the evolution of decreased movement can augment the efficacy of marine reserves, especially for species, such as skipjack tuna, with relatively short generation times. Even when movement rates did not evolve substantially over 50 years (e.g., given long generation times or little heritable variation), marine reserves were an effective tool for the conservation of fish populations when mean movement rates were low or MRs were large.

Extraordinary aggressive behavior from the giant coral reef fish, Bolbometopon muricatum, in a remote marine reserve.

Science.gov (United States)

Muñoz, Roldan C; Zgliczynski, Brian J; Laughlin, Joseph L; Teer, Bradford Z

2012-01-01

Human impacts to terrestrial and marine communities are widespread and typically begin with the local extirpation of large-bodied animals. In the marine environment, few pristine areas relatively free of human impact remain to provide baselines of ecosystem function and goals for restoration efforts. Recent comparisons of remote and/or protected coral reefs versus impacted sites suggest remote systems are dominated by apex predators, yet in these systems the ecological role of non-predatory, large-bodied, highly vulnerable species such as the giant bumphead parrotfish (Bolbometopon muricatum) has received less attention. Overfishing of Bolbometopon has lead to precipitous declines in population density and avoidance of humans throughout its range, contributing to its status as a candidate species under the U. S. Endangered Species Act and limiting opportunities to study unexploited populations. Here we show that extraordinary ecological processes, such as violent headbutting contests by the world's largest parrotfish, can be revealed by studying unexploited ecosystems, such as the coral reefs of Wake Atoll where we studied an abundant population of Bolbometopon. Bolbometopon is among the largest of coral reef fishes and is a well known, charismatic species, yet to our knowledge, no scientific documentation of ritualized headbutting exists for marine fishes. Our observations of aggressive headbutting by Bolbometopon underscore that remote locations and marine reserves, by inhibiting negative responses to human observers and by allowing the persistence of historical conditions, can provide valuable opportunities to study ecosystems in their natural state, thereby facilitating the discovery, conservation, and interpretation of a range of sometimes remarkable behavioral and ecological processes.

Adaptation of Australia’s Marine Ecosystems to Climate Change: Using Science to Inform Conservation Management

Directory of Open Access Journals (Sweden)

Johanna E. Johnson

2014-01-01

Full Text Available The challenges that climate change poses for marine ecosystems are already manifesting in impacts at the species, population, and community levels in Australia, particularly in Tasmania and tropical northern Australia. Many species and habitats are already under threat as a result of human activities, and the additional pressure from climate change significantly increases the challenge for marine conservation and management. Climate change impacts are expected to magnify as sea surface temperatures, ocean chemistry, ocean circulation, sea level, rainfall, and storm patterns continue to change this century. In particular, keystone species that form the foundation of marine habitats, such as coral reefs, kelp beds, and temperate rocky reefs, are projected to pass thresholds with subsequent implications for communities and ecosystems. This review synthesises recent science in this field: the observed impacts and responses of marine ecosystems to climate change, ecological thresholds of change, and strategies for marine conservation to promote adaptation. Increasing observations of climate-related impacts on Australia’s marine ecosystems—both temperate and tropical—are making adaptive management more important than ever before. Our increased understanding of the impacts and responses of marine ecosystems to climate change provides a focus for “no-regrets” adaptations that can be implemented now and refined as knowledge improves.

Preferences for Management of Near-Shore Marine Ecosystems: A Choice Experiment in New Zealand

Directory of Open Access Journals (Sweden)

Sophal Chhun

2013-09-01

Full Text Available There is considerable interest in New Zealand in establishing “Customary Management Areas” (taiāpure and mātaitai and Marine Reserves to support Māori cultural practices and restore declining biodiversity and fish stocks. Allocation of near-shore marine areas for these management systems potentially benefits the larger public, but it has often been vigorously opposed by recreational and commercial fishers. This paper reports estimates of the relative values held by the public toward four potentially conflicting uses of near-shore marine areas. These estimates come from a web-based choice survey completed by 1055 respondents recruited from throughout New Zealand. The response rate was especially high at 60%. We present results weighted to the characteristics of the population and test the results against a variety of well-known sources of survey bias. Scenario development suggests that some reallocation of near-shore marine areas to any of the management systems under discussion alternative to the status quo is likely to yield a welfare gain. A combination of marine reserves and taiāpure is most preferred. The exercise supports the use of discrete choice experiments to provide crucial information about difficult-to-quantify public values for aspects of management of near-shore marine areas, such as proposed taiāpure, mātaitai, or marine reserves.

Brucella Genetic Variability in Wildlife Marine Mammals Populations Relates to Host Preference and Ocean Distribution.

Science.gov (United States)

Suárez-Esquivel, Marcela; Baker, Kate S; Ruiz-Villalobos, Nazareth; Hernández-Mora, Gabriela; Barquero-Calvo, Elías; González-Barrientos, Rocío; Castillo-Zeledón, Amanda; Jiménez-Rojas, César; Chacón-Díaz, Carlos; Cloeckaert, Axel; Chaves-Olarte, Esteban; Thomson, Nicholas R; Moreno, Edgardo; Guzmán-Verri, Caterina

2017-07-01

Intracellular bacterial pathogens probably arose when their ancestor adapted from a free-living environment to an intracellular one, leading to clonal bacteria with smaller genomes and less sources of genetic plasticity. Still, this plasticity is needed to respond to the challenges posed by the host. Members of the Brucella genus are facultative-extracellular intracellular bacteria responsible for causing brucellosis in a variety of mammals. The various species keep different host preferences, virulence, and zoonotic potential despite having 97-99% similarity at genome level. Here, we describe elements of genetic variation in Brucella ceti isolated from wildlife dolphins inhabiting the Pacific Ocean and the Mediterranean Sea. Comparison with isolates obtained from marine mammals from the Atlantic Ocean and the broader Brucella genus showed distinctive traits according to oceanic distribution and preferred host. Marine mammal isolates display genetic variability, represented by an important number of IS711 elements as well as specific IS711 and SNPs genomic distribution clustering patterns. Extensive pseudogenization was found among isolates from marine mammals as compared with terrestrial ones, causing degradation in pathways related to energy, transport of metabolites, and regulation/transcription. Brucella ceti isolates infecting particularly dolphin hosts, showed further degradation of metabolite transport pathways as well as pathways related to cell wall/membrane/envelope biogenesis and motility. Thus, gene loss through pseudogenization is a source of genetic variation in Brucella, which in turn, relates to adaptation to different hosts. This is relevant to understand the natural history of bacterial diseases, their zoonotic potential, and the impact of human interventions such as domestication. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Rapid effects of marine reserves via larval dispersal.

Directory of Open Access Journals (Sweden)

Richard Cudney-Bueno

Full Text Available Marine reserves have been advocated worldwide as conservation and fishery management tools. It is argued that they can protect ecosystems and also benefit fisheries via density-dependent spillover of adults and enhanced larval dispersal into fishing areas. However, while evidence has shown that marine reserves can meet conservation targets, their effects on fisheries are less understood. In particular, the basic question of if and over what temporal and spatial scales reserves can benefit fished populations via larval dispersal remains unanswered. We tested predictions of a larval transport model for a marine reserve network in the Gulf of California, Mexico, via field oceanography and repeated density counts of recently settled juvenile commercial mollusks before and after reserve establishment. We show that local retention of larvae within a reserve network can take place with enhanced, but spatially-explicit, recruitment to local fisheries. Enhancement occurred rapidly (2 yrs, with up to a three-fold increase in density of juveniles found in fished areas at the downstream edge of the reserve network, but other fishing areas within the network were unaffected. These findings were consistent with our model predictions. Our findings underscore the potential benefits of protecting larval sources and show that enhancement in recruitment can be manifested rapidly. However, benefits can be markedly variable within a local seascape. Hence, effects of marine reserve networks, positive or negative, may be overlooked when only focusing on overall responses and not considering finer spatially-explicit responses within a reserve network and its adjacent fishing grounds. Our results therefore call for future research on marine reserves that addresses this variability in order to help frame appropriate scenarios for the spatial management scales of interest.

Foraminiferal abundance in the modified marine environment of Cola Bay region of Goa

Digital Repository Service at National Institute of Oceanography (India)

Setty, M.G.A.P.; Narayanan, V.

perforate foraminifera are found to be very abundant over all other types in the living populations. In the Cola Bay region of Goa, where the marine environment is affected by the industrial effluents, the foraminiferal distribution shows that @iAmmonia...

Australia’s protected area network fails to adequately protect the world’s most threatened marine fishes

Directory of Open Access Journals (Sweden)

Karen R. Devitt

2015-01-01

Full Text Available In order to maintain ecosystems and biodiversity, Australia has long invested in the development of marine and terrestrial protected area networks. Within this land- and sea-scape, northern Australia represents a global population stronghold for four species of the world’s most threatened marine fish family, the sawfishes (family Pristidae. The distribution of sawfishes across northern Australia has previously only been coarsely estimated, and the adequacy of their representation in protected areas has not been evaluated. The calculated range of each species was intersected with Australia’s marine and terrestrial protected area datasets, and targets of 10% marine and 17% inland range protection were used to determine adequacy of sawfish range protection. Marine targets have been achieved for all species, but the inland range protection targets have not been met for any species. Results indicate that further protection of inland habitats is required in order to improve sawfish protection and habitat connectivity.

Accumulation of radionuclides in selected marine biota from Manjung coastal area

Energy Technology Data Exchange (ETDEWEB)

Abdullah, Anisa, E-mail: coppering@ymail.com; Hamzah, Zaini; Wood, Ab. Khalik [Faculty of Applied Sciences, Universiti Teknologi MARA, 40450, Shah Alam, Selangor (Malaysia); Saat, Ahmad [Faculty of Applied Sciences, Universiti Teknologi MARA, 40450, Shah Alam, Selangor (Malaysia); Institute of Science, Universiti Teknologi MARA, 40450 Shah Alam, Selangor (Malaysia); Alias, Masitah [TNB Reasearch Sdn. Bhd., Kawasan Institusi Penyelidikan, 43000 Kajang, Selangor (Malaysia)

2015-04-29

Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 ({sup 226}Ra), radium-228 ({sup 228}Ra) and potassium-40 ({sup 40}K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (H{sub in}), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.

Accumulation of radionuclides in selected marine biota from Manjung coastal area

International Nuclear Information System (INIS)

Abdullah, Anisa; Hamzah, Zaini; Wood, Ab. Khalik; Saat, Ahmad; Alias, Masitah

2015-01-01

Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 ( 226 Ra), radium-228 ( 228 Ra) and potassium-40 ( 40 K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (H in ), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption

Accumulation of radionuclides in selected marine biota from Manjung coastal area

Science.gov (United States)

Abdullah, Anisa; Hamzah, Zaini; Saat, Ahmad; Wood, Ab. Khalik; Alias, Masitah

2015-04-01

Distribution of radionuclides from anthropogenic activities has been intensively studied due to the accumulation of radionuclides in marine ecosystem. Manjung area is affected by rapid population growth and socio-economic development such as heavy industrial activities including coal fired power plant, iron foundries, port development and factories, agricultural runoff, waste and toxic discharge from factories.It has radiological risk and toxic effect when effluent from the industries in the area containing radioactive materials either being transported to the atmosphere and deposited back over the land or by run off to the river and flow into coastal area and being absorbed by marine biota. Radionuclides presence in the marine ecosystem can be adversely affect human health when it enters the food chain. This study is focusing on the radionuclides [thorium (Th), uranium (U), radium-226 (226Ra), radium-228 (228Ra) and potassium-40 (40K)] content in marine biota and sea water from Manjung coastal area. Five species of marine biota including Johnius dussumieri (Ikan Gelama), Pseudorhombus malayanus (Ikan Sebelah), Arius maculatus (Ikan Duri), Portunus pelagicus (Ketam Renjong) and Charybdis natator (Ketam Salib) were collected during rainy and dry seasons. Measurements were carried out using Inductively Coupled Plasma Mass Spectrometer (ICPMS). The results show that the concentration of radionuclides varies depends on ecological environment of respective marine biota species. The concentrations and activity concentrations are used for the assessment of potential internal hazard index (Hin), transfer factor (TF), ingestion dose rate (D) and health risk index (HRI) to monitor radiological risk for human consumption.

Marine Mammals and Climate Change in the Pacific Arctic: Impacts & Resilience

Science.gov (United States)

Moore, S. E.

2014-12-01

Extreme reductions in Arctic sea ice extent and thickness have become a hallmark of climate change, but impacts to the marine ecosystem are poorly understood. As top predators, marine mammals must adapt to biological responses to physical forcing and thereby become sentinels to ecosystem variability and reorganization. Recent sea ice retreats have influenced the ecology of marine mammals in the Pacific Arctic sector. Walruses now often haul out by the thousands along the NW Alaska coast in late summer, and reports of harbor porpoise, humpback, fin and minke whales in the Chukchi Sea demonstrate that these temperate species routinely occur there. In 2010, satellite tagged bowhead whales from Atlantic and Pacific populations met in the Northwest Passage, an overlap thought precluded by sea ice since the Holocene. To forage effectively, baleen whales must target dense patches of zooplankton and small fishes. In the Pacific Arctic, bowhead and gray whales appear to be responding to enhanced prey availability delivered both by new production and advection pathways. Two programs, the Distributed Biological Observatory (DBO) and the Synthesis of Arctic Research (SOAR), include tracking of marine mammal and prey species' responses to ecosystem shifts associated with sea ice loss. Both programs provide an integrated-ecosystem baseline in support of the development of a web-based Marine Mammal Health Map, envisioned as a component of the U.S. Integrated Ocean Observing System (IOOS). An overarching goal is to identify ecological patterns for marine mammals in the 'new' Arctic, as a foundation for integrative research, local response and adaptive management.

Implications in studies of environmental risk assessments: Does culture medium influence the results of toxicity tests of marine bacteria?

Science.gov (United States)

Díaz-García, Alejandra; Borrero-Santiago, Ana R; Riba, Inmaculada

2018-04-14

Two marine bacterial populations (Roseobacter sp. and Pseudomonas litoralis) were exposed to different concentrations of zinc (300, 625, 1250, 2000, 2500 and 5000 mg L -1 ) and cadmium (75, 250, 340, 500 and 1000 mg L -1 ) using two culture media (full nutrient Marine Broth 2216 "MB" and 1:10 (vol/vol) dilution with seawater of Marine Broth 2216 "MB SW "), in order to assess population responses depending on the culture medium and also potential adverse effects associated with these two metals. Different responses were found depending on the culture medium (Bacterial abundance (cells·mL -1 ), growth rates (μ, hours -1 ), and production of Extracellular Polysaccharides Substances (EPS) (μg glucose·cells -1 ). Results showed negative effects in both strains after the exposure to Zn treatments. Both strains showed highest metal sensitivity at low concentrations using both culture media. However, different results were found when exposing the bacterial populations to Cd treatments depending on the culture medium. Highest toxicity was observed using MB at low levels of Cd concentrations, whereas MB SW showed toxicity to bacteria at higher concentrations of Cd. Results not only showed adverse effects on Roseobacter sp. and Pseudomonas litoralis associated with the concentration of Zn and Cd, but also confirm that depending on the culture medium results can differ. This work suggests MB SW as an adequate culture medium to study metal toxicity bioassays in order to predict realistic effects on marine bacterial populations. Copyright © 2018 Elsevier Ltd. All rights reserved.

Seashore marine table quiz

OpenAIRE

Institute, Marine

2013-01-01

Develop an increasing awareness of plants and animals that live in local marine environments including the seashore, seas and oceans of Ireland. After learning all about the seashore and other marine related lessons, this quiz can be used to evaluate the student’s knowledge of the marine related living things and natural environments. The table quiz can be used as a guide, highlighting facts about the marine environment and some of the animals that live there.

Rapid divergence of mussel populations despite incomplete barriers to dispersal.

Science.gov (United States)

Maas, Diede L; Prost, Stefan; Bi, Ke; Smith, Lydia L; Armstrong, Ellie E; Aji, Ludi P; Toha, Abdul Hamid A; Gillespie, Rosemary G; Becking, Leontine E

2018-04-01

Striking genetic structure among marine populations at small spatial scales is becoming evident with extensive molecular studies. Such observations suggest isolation at small scales may play an important role in forming patterns of genetic diversity within species. Isolation-by-distance, isolation-by-environment and historical priority effects are umbrella terms for a suite of processes that underlie genetic structure, but their relative importance at different spatial and temporal scales remains elusive. Here, we use marine lakes in Indonesia to assess genetic structure and assess the relative roles of the processes in shaping genetic differentiation in populations of a bivalve mussel (Brachidontes sp.). Marine lakes are landlocked waterbodies of similar age (6,000-10,000 years), but with heterogeneous environments and varying degrees of connection to the sea. Using a population genomic approach (double-digest restriction-site-associated DNA sequencing), we show strong genetic structuring across populations (range F ST : 0.07-0.24) and find limited gene flow through admixture plots. At large spatial scales (>1,400 km), a clear isolation-by-distance pattern was detected. At smaller spatial scales (connection. We hypothesize that (incomplete) dispersal barriers can cause initial isolation, allowing priority effects to give the numerical advantage necessary to initiate strong genetic structure. Priority effects may be strengthened by local adaptation, which the data may corroborate by showing a high correlation between mussel genotypes and temperature. Our study indicates an often-neglected role of (evolution-mediated) priority effects in shaping population divergence. © 2018 The Authors. Molecular Ecology published by John Wiley & Sons Ltd.

Effects of Disturbance on Populations of Marine Mammals

Science.gov (United States)

2015-09-30

function of health (body mass index and white blood cell count ) and a separate model of direct relations between demographic rates and prey...support from the Joint Industry Programme to develop a bioenergetic model to estimate population-level responses to disturbance. They are focusing on sperm

Marine bioacoustics and technology: The new world of marine acoustic ecology

Science.gov (United States)

Hastings, Mardi C.; Au, Whitlow W. L.

2012-11-01

Marine animals use sound for communication, navigation, predator avoidance, and prey detection. Thus the rise in acoustic energy associated with increasing human activity in the ocean has potential to impact the lives of marine animals. Thirty years ago marine bioacoustics primarily focused on evaluating effects of human-generated sound on hearing and behavior by testing captive animals and visually observing wild animals. Since that time rapidly changing electronic and computing technologies have yielded three tools that revolutionized how bioacousticians study marine animals. These tools are (1) portable systems for measuring electrophysiological auditory evoked potentials, (2) miniaturized tags equipped with positioning sensors and acoustic recording devices for continuous short-term acoustical observation rather than intermittent visual observation, and (3) passive acoustic monitoring (PAM) systems for remote long-term acoustic observations at specific locations. The beauty of these breakthroughs is their direct applicability to wild animals in natural habitats rather than only to animals held in captivity. Hearing capabilities of many wild species including polar bears, beaked whales, and reef fishes have now been assessed by measuring their auditory evoked potentials. Miniaturized acoustic tags temporarily attached to an animal to record its movements and acoustic environment have revealed the acoustic foraging behavior of sperm and beaked whales. Now tags are being adapted to fishes in effort to understand their behavior in the presence of noise. Moving and static PAM systems automatically detect and characterize biological and physical features of an ocean area without adding any acoustic energy to the environment. PAM is becoming a powerful technique for understanding and managing marine habitats. This paper will review the influence of these transformative tools on the knowledge base of marine bioacoustics and elucidation of relationships between marine

Construction of a web-based questionnaire for longitudinal investigation of work exposure, musculoskeletal pain and performance impairments in high-performance marine craft populations.

Science.gov (United States)

Lo Martire, Riccardo; de Alwis, Manudul Pahansen; Äng, Björn Olov; Garme, Karl

2017-07-20

High-performance marine craft personnel (HPMCP) are regularly exposed to vibration and repeated shock (VRS) levels exceeding maximum limitations stated by international legislation. Whereas such exposure reportedly is detrimental to health and performance, the epidemiological data necessary to link these adverse effects causally to VRS are not available in the scientific literature, and no suitable tools for acquiring such data exist. This study therefore constructed a questionnaire for longitudinal investigations in HPMCP. A consensus panel defined content domains, identified relevant items and outlined a questionnaire. The relevance and simplicity of the questionnaire's content were then systematically assessed by expert raters in three consecutive stages, each followed by revisions. An item-level content validity index (I-CVI) was computed as the proportion of experts rating an item as relevant and simple, and a scale-level content validity index (S-CVI/Ave) as the average I-CVI across items. The thresholds for acceptable content validity were 0.78 and 0.90, respectively. Finally, a dynamic web version of the questionnaire was constructed and pilot tested over a 1-month period during a marine exercise in a study population sample of eight subjects, while accelerometers simultaneously quantified VRS exposure. Content domains were defined as work exposure, musculoskeletal pain and human performance, and items were selected to reflect these constructs. Ratings from nine experts yielded S-CVI/Ave of 0.97 and 1.00 for relevance and simplicity, respectively, and the pilot test suggested that responses were sensitive to change in acceleration and that the questionnaire, following some adjustments, was feasible for its intended purpose. A dynamic web-based questionnaire for longitudinal survey of key variables in HPMCP was constructed. Expert ratings supported that the questionnaire content is relevant, simple and sufficiently comprehensive, and the pilot test suggested

Does the globally invasive marine angiosperm, Halophila stipulacea, have high genetic diversity or unique mutations?

Science.gov (United States)

Chiquillo, K.; Campese, L.; Barber, P. H.; Willette, D. A.

2016-02-01

Seagrasses are important primary producers in many marine ecosystems, and support a wide diversity of marine life. However, invasive seagrasses like Halophila stipulacea can have pronounced negative impacts on an ecosystem by displacing native seagrasses and changing the community composition of the reef. Endemic to the Red Sea, Persian Gulf and Indian Ocean, Halophila stipulacea has become invasive in the Mediterranean and Caribbean Seas, presumably as a result of the opening of the Suez Canal and international ship traffic. However, it is unclear why this marine angiosperm has become invasive in parts of its range and not others. It is hypothesized that invasive forms may have evolved rapidly in response to natural selection in new and novel environments. Alternatively, genetic variation of introduced populations may be uniquely suited to thrive in regions where it is invasive. In this study, we use RAD next-generation sequencing to screen thousands of SNPs to investigate the genetic basis of adaptation in both native and invasive populations. We test whether genes under selection in the native range are the same as in the invasive range, or whether new genes have arisen with the invasion of each marine basin. The comparison of SNP frequencies unique among basins and environmental variables will aid in predicting new areas of invasion, assisting in improved management strategies to combat this invasive seagrass.

Marine Jurisdiction Boundaries

Data.gov (United States)

Department of Homeland Security — The NOAA Coastal Services Center's Marine Jurisdiction dataset was created to assist in marine spatial planning and offshore alternative energy sitting. This is a...

75 FR 68605 - Marine Mammals

Science.gov (United States)

2010-11-08

...-XX23 Marine Mammals AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric... permit to conduct research on marine mammals. ADDRESSES: The permit and related documents are available... applicant. The requested permit has been issued under the authority of the Marine Mammal Protection Act of...

77 FR 2512 - Marine Mammals

Science.gov (United States)

2012-01-18

...-XA905 Marine Mammals AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric... Dorian Houser, Ph.D., National Marine Mammal Foundation, 2240 Shelter Island Drive, 200, San Diego, CA... subject permit is requested under the authority of the Marine Mammal Protection Act of 1972, as amended...

Transcriptome analysis and SNP development can resolve population differentiation of Streblospio benedicti, a developmentally dimorphic marine annelid.

Directory of Open Access Journals (Sweden)

Christina Zakas

Full Text Available Next-generation sequencing technology is now frequently being used to develop genomic tools for non-model organisms, which are generally important for advancing studies of evolutionary ecology. One such species, the marine annelid Streblospio benedicti, is an ideal system to study the evolutionary consequences of larval life history mode because the species displays a rare offspring dimorphism termed poecilogony, where females can produce either many small offspring or a few large ones. To further develop S. benedicti as a model system for studies of life history evolution, we apply 454 sequencing to characterize the transcriptome for embryos, larvae, and juveniles of this species, for which no genomic resources are currently available. Here we performed a de novo alignment of 336,715 reads generated by a quarter GS-FLX (Roche 454 run, which produced 7,222 contigs. We developed a novel approach for evaluating the site frequency spectrum across the transcriptome to identify potential signatures of selection. We also developed 84 novel single nucleotide polymorphism (SNP markers for this species that are used to distinguish coastal populations of S. benedicti. We validated the SNPs by genotyping individuals of different developmental modes using the BeadXPress Golden Gate assay (Illumina. This allowed us to evaluate markers that may be associated with life-history mode.

Towards a common effort in mapping marine geohazard features in the Mediterranean Sea. An unavoidable tool for the "blue growth" and marine spatial planning.

Science.gov (United States)

Chiocci, F. L.; Gorini, C.; Ercilla, G.; Sakellariou, D.; Casalbore, D.; Ridente, D.

2017-12-01

46,000 km of densely settled coastlines characterise the Mediterranean Sea. The region connects three continents, where the population doubled in the last 20 years, and among which, trade, maritime transports and migratory fluxes have been increasing. Moreover, the Mediterranean is by far the world's largest tourist destination, attracting almost a third of international tourists and generating more than a quarter of tourism-related revenues worldwide. The Mediterranean area lays in a plate boundary zone highly active in terms of seismicity, volcanism and submarine geological processes that over recent time have repeatedly demonstrated to be able to generate catastrophic events.. As an example 98 tsunamis where recorded in the Mediterranean on historical times (on average one every century). This census do not encompasses small events, such as minor tsunamis generated by submarine landslides that can produce serious damage in the near field. In Stromboli volcanic island (Southern Tyrrhenian Sea) for instance, the frequency of such events accounts for 5 events over the last century Mapping the seafloor for geohazard assessment becomes, therefore, especially important for the sustainable development of the marine and coastal areas both economically and socially. The increasing amount of high resolution seafloor mapping data allows defining geohazard features such as volcanic vents, active faults, submarine landslide, canyon head migrating bedforms fluid expulsion structure with a detail able to highlight even locally dangerous situations. If the marine geoscience community will be able to build common standards to interpret and cartographically represent the marine geohazard features private industries and public agencies will benefit of an unvaluable tool which will help in better exploit the marine resource and/or preserve the marine and coastal environment. This contribution will present spectacular examples of marine geohazards from the Mediterranean Seas; the

77 FR 17033 - Taking and Importing Marine Mammals: Taking Marine Mammals Incidental to Navy's Training...

Science.gov (United States)

2012-03-23

... take marine mammals by harassment incidental to its training activities at the Gulf of Mexico (GOMEX... Importing Marine Mammals: Taking Marine Mammals Incidental to Navy's Training Activities at the Gulf of Mexico Range Complex AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric...

Marine and Other Aquatic Dermatoses.

Science.gov (United States)

Sridhar, Surg Capt Jandhyala; Deo, Surg Cdr Rajeev

2017-01-01

Occupational and recreational aquatic activity predisposes our population to a wide variety of dermatoses. Sunburn, urticaria, jellyfish stings, and contact dermatitis to rubber equipment are common allergies that are encountered in the aquatic environment. Among the infections, tinea versicolor, intertrigo, and verruca vulgaris are widespread. Swimmer's itch may occur due to skin penetration by schistosome cercariae, while free-floating nematocysts of marine coelenterates may precipitate seabather's eruption. "Suit squeeze" due to cutaneous barotrauma and lymphoedematous peau d'orange due to decompression are rare, described entities. This review serves as a ready reckoner for Indian dermatologists and medical practitioners to identify and manage these conditions.

Marine and other aquatic dermatoses

Directory of Open Access Journals (Sweden)

Jandhyala Sridhar

2017-01-01

Full Text Available Occupational and recreational aquatic activity predisposes our population to a wide variety of dermatoses. Sunburn, urticaria, jellyfish stings, and contact dermatitis to rubber equipment are common allergies that are encountered in the aquatic environment. Among the infections, tinea versicolor, intertrigo, and verruca vulgaris are widespread. Swimmer's itch may occur due to skin penetration by schistosome cercariae, while free-floating nematocysts of marine coelenterates may precipitate seabather's eruption. “Suit squeeze” due to cutaneous barotrauma and lymphoedematous peau d'orange due to decompression are rare, described entities. This review serves as a ready reckoner for Indian dermatologists and medical practitioners to identify and manage these conditions.

Functional genetic divergence in high CO2 adapted Emiliania huxleyi populations.

Science.gov (United States)

Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H

2013-07-01

Predicting the impacts of environmental change on marine organisms, food webs, and biogeochemical cycles presently relies almost exclusively on short-term physiological studies, while the possibility of adaptive evolution is often ignored. Here, we assess adaptive evolution in the coccolithophore Emiliania huxleyi, a well-established model species in biological oceanography, in response to ocean acidification. We previously demonstrated that this globally important marine phytoplankton species adapts within 500 generations to elevated CO2 . After 750 and 1000 generations, no further fitness increase occurred, and we observed phenotypic convergence between replicate populations. We then exposed adapted populations to two novel environments to investigate whether or not the underlying basis for high CO2 -adaptation involves functional genetic divergence, assuming that different novel mutations become apparent via divergent pleiotropic effects. The novel environment "high light" did not reveal such genetic divergence whereas growth in a low-salinity environment revealed strong pleiotropic effects in high CO2 adapted populations, indicating divergent genetic bases for adaptation to high CO2 . This suggests that pleiotropy plays an important role in adaptation of natural E. huxleyi populations to ocean acidification. Our study highlights the potential mutual benefits for oceanography and evolutionary biology of using ecologically important marine phytoplankton for microbial evolution experiments. © 2012 The Author(s). Evolution © 2012 The Society for the Study of Evolution.

Marine biodiversity and fishery sustainability.

Science.gov (United States)

Shao, Kwang-Tsao

2009-01-01

Marine fish is one of the most important sources of animal protein for human use, especially in developing countries with coastlines. Marine fishery is also an important industry in many countries. Fifty years ago, many people believed that the ocean was so vast and so resilient that there was no way the marine environment could be changed, nor could marine fishery resources be depleted. Half a century later, we all agree that the depletion of fishery resources is happening mainly due to anthropogenic factors such as overfishing, habitat destruction, pollution, invasive species introduction, and climate change. Since overfishing can cause chain reactions that decrease marine biodiversity drastically, there will be no seafood left after 40 years if we take no action. The most effective ways to reverse this downward trend and restore fishery resources are to promote fishery conservation, establish marine-protected areas, adopt ecosystem-based management, and implement a "precautionary principle." Additionally, enhancing public awareness of marine conservation, which includes eco-labeling, fishery ban or enclosure, slow fishing, and MPA (marine protected areas) enforcement is important and effective. In this paper, we use Taiwan as an example to discuss the problems facing marine biodiversity and sustainable fisheries.

Marine electrical practice

CERN Document Server

Watson, G O

1991-01-01

Marine Engineering Series: Marine Electrical Practice, Sixth Edition focuses on changes in the marine industry, including the application of programmable electronic systems, generators, and motors. The publication first ponders on insulation and temperature ratings of equipment, protection and discrimination, and AC generators. Discussions focus on construction, shaft-drive generators, effect of unbalanced loading, subtransient and transient reactance, protection discrimination, fault current, measurement of ambient air temperature, and basis of machine ratings. The text then examines AC switc

Mariners Weather Log

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The Mariners Weather Log (MWL) is a publication containing articles, news and information about marine weather events and phenomena, worldwide environmental impact...

Regionally isolated populations of an imperiled Caribbean coral, Acropora palmata.

Science.gov (United States)

Baums, Iliana B; Miller, Margaret W; Hellberg, Michael E

2005-04-01

The movements of larvae between marine populations are difficult to follow directly and have been the subject of much controversy, especially in the Caribbean. The debate centres on the degree to which populations are demographically open, such that depleted populations can be replenished by recruitment from distant healthy populations, or demographically closed and thus in need of local management. Given the depressed state of many tropical reef populations, the understanding of these movements now bears critically on the number, placement, and size of marine reserves. Most genetic analyses assume that dispersal patterns have been stable for thousands of generations, thus they commonly reflect past colonization histories more than ongoing dispersal. Recently developed multilocus genotyping approaches, however, have the demonstrated ability to detect both migration and population isolation over far shorter timescales. Previously, we developed five microsatellite markers and demonstrated them to be both Mendelian and coral-specific. Using these markers and Bayesian analyses, we show here that populations of the imperiled reef-building coral, Acropora palmata, have experienced little or no recent genetic exchange between the western and the eastern Caribbean. Puerto Rico is identified as an area of mixing between the two subregions. As a consequence of this regional isolation, populations in the western and eastern Caribbean should have the potential to adapt to local conditions and will require population-specific management strategies.

Marine Genomics: A clearing-house for genomic and transcriptomic data of marine organisms

Directory of Open Access Journals (Sweden)

Trent Harold F

2005-03-01

Full Text Available Abstract Background The Marine Genomics project is a functional genomics initiative developed to provide a pipeline for the curation of Expressed Sequence Tags (ESTs and gene expression microarray data for marine organisms. It provides a unique clearing-house for marine specific EST and microarray data and is currently available at http://www.marinegenomics.org. Description The Marine Genomics pipeline automates the processing, maintenance, storage and analysis of EST and microarray data for an increasing number of marine species. It currently contains 19 species databases (over 46,000 EST sequences that are maintained by registered users from local and remote locations in Europe and South America in addition to the USA. A collection of analysis tools are implemented. These include a pipeline upload tool for EST FASTA file, sequence trace file and microarray data, an annotative text search, automated sequence trimming, sequence quality control (QA/QC editing, sequence BLAST capabilities and a tool for interactive submission to GenBank. Another feature of this resource is the integration with a scientific computing analysis environment implemented by MATLAB. Conclusion The conglomeration of multiple marine organisms with integrated analysis tools enables users to focus on the comprehensive descriptions of transcriptomic responses to typical marine stresses. This cross species data comparison and integration enables users to contain their research within a marine-oriented data management and analysis environment.

76 FR 76949 - Marine Mammals

Science.gov (United States)

2011-12-09

...-XR52 Marine Mammals AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric.... 14534 is requested under the authority of the Marine Mammal Protection Act of 1972, as amended (16 U.S.C. 1361 et seq.), the regulations governing the taking and importing of marine mammals (50 CFR part 216...

77 FR 14352 - Marine Mammals

Science.gov (United States)

2012-03-09

...-XB065 Marine Mammals AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric... Marine Mammal Protection Act of 1972, as amended (16 U.S.C. 1361 et seq.), the regulations governing the taking and importing of marine mammals (50 CFR part 216), the Endangered Species Act of 1973, as amended...