Barriers to wheelchair use in the winter.

Science.gov (United States)

Ripat, Jacquie D; Brown, Cara L; Ethans, Karen D

2015-06-01

To test the hypothesis that challenges to community participation posed by winter weather are greater for individuals who use scooters, manual and power wheelchairs (wheeled mobility devices [WMDs]) than for the general ambulatory population, and to determine what WMD users identify as the most salient environmental barriers to community participation during the winter. Cross-sectional survey organized around 5 environmental domains: technological, natural, physical, social/attitudinal, and policy. Urban community in Canada. Convenience sample of WMD users or their proxy (N=99). Not applicable. Not applicable. Forty-two percent identified reduced outing frequency in winter months, associated with increased age (χ(3)=6.4, P=.04), lack of access to family/friends for transportation (χ(2)=8.1, P=.04), and primary type of WMD used in the winter (scooter χ(2)=8.8, P=.003). Most reported tires/casters becoming stuck in the snow (95%) or slipping on the ice (91%), difficulty ascending inclines/ramps (92%), and cold hands while using controls or pushing rims (85%); fewer identified frozen wheelchair/scooter batteries, seat cushions/backrests, or electronics. Sidewalks/roads were reported to be problematic by 99%. Eighty percent reported needing additional help in the winter. Limited community access in winter led to a sense of loneliness/isolation, and fear/anxiety related to safety. Respondents identified policies that limited participation during winter. People who use WMDs decrease their community participation in cold weather because of multiple environmental barriers. Clinicians, researchers, and policymakers can take a multidimensional approach to mitigate these barriers in order to enhance community participation by WMD users in winter. Copyright © 2015 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

Seasonality and vertical structure of microbial communities in an ocean gyre.

Science.gov (United States)

Treusch, Alexander H; Vergin, Kevin L; Finlay, Liam A; Donatz, Michael G; Burton, Robert M; Carlson, Craig A; Giovannoni, Stephen J

2009-10-01

Vertical, seasonal and geographical patterns in ocean microbial communities have been observed in many studies, but the resolution of community dynamics has been limited by the scope of data sets, which are seldom up to the task of illuminating the highly structured and rhythmic patterns of change found in ocean ecosystems. We studied vertical and temporal patterns in the microbial community composition in a set of 412 samples collected from the upper 300 m of the water column in the northwestern Sargasso Sea, on cruises between 1991 and 2004. The region sampled spans the extent of deep winter mixing and the transition between the euphotic and the upper mesopelagic zones, where most carbon fixation and reoxidation occurs. A bioinformatic pipeline was developed to de-noise, normalize and align terminal restriction fragment length polymorphism (T-RFLP) data from three restriction enzymes and link T-RFLP peaks to microbial clades. Non-metric multidimensional scaling statistics resolved three microbial communities with distinctive composition during seasonal stratification: a surface community in the region of lowest nutrients, a deep chlorophyll maximum community and an upper mesopelagic community. A fourth microbial community was associated with annual spring blooms of eukaryotic phytoplankton that occur in the northwestern Sargasso Sea as a consequence of winter convective mixing that entrains nutrients to the surface. Many bacterial clades bloomed in seasonal patterns that shifted with the progression of stratification. These richly detailed patterns of community change suggest that highly specialized adaptations and interactions govern the success of microbial populations in the oligotrophic ocean.

Impacts of extreme winter warming events on plant physiology in a sub-Arctic heath community.

Science.gov (United States)

Bokhorst, Stef; Bjerke, Jarle W; Davey, Matthew P; Taulavuori, Kari; Taulavuori, Erja; Laine, Kari; Callaghan, Terry V; Phoenix, Gareth K

2010-10-01

Insulation provided by snow cover and tolerance of freezing by physiological acclimation allows Arctic plants to survive cold winter temperatures. However, both the protection mechanisms may be lost with winter climate change, especially during extreme winter warming events where loss of snow cover from snow melt results in exposure of plants to warm temperatures and then returning extreme cold in the absence of insulating snow. These events cause considerable damage to Arctic plants, but physiological responses behind such damage remain unknown. Here, we report simulations of extreme winter warming events using infrared heating lamps and soil warming cables in a sub-Arctic heathland. During these events, we measured maximum quantum yield of photosystem II (PSII), photosynthesis, respiration, bud swelling and associated bud carbohydrate changes and lipid peroxidation to identify physiological responses during and after the winter warming events in three dwarf shrub species: Empetrum hermaphroditum, Vaccinium vitis-idaea and Vaccinium myrtillus. Winter warming increased maximum quantum yield of PSII, and photosynthesis was initiated for E. hermaphroditum and V. vitis-idaea. Bud swelling, bud carbohydrate decreases and lipid peroxidation were largest for E. hermaphroditum, whereas V. myrtillus and V. vitis-idaea showed no or less strong responses. Increased physiological activity and bud swelling suggest that sub-Arctic plants can initiate spring-like development in response to a short winter warming event. Lipid peroxidation suggests that plants experience increased winter stress. The observed differences between species in physiological responses are broadly consistent with interspecific differences in damage seen in previous studies, with E. hermaphroditum and V. myrtillus tending to be most sensitive. This suggests that initiation of spring-like development may be a major driver in the damage caused by winter warming events that are predicted to become more

Physical activity levels of community-dwelling older adults are influenced by winter weather variables.

Science.gov (United States)

Jones, G R; Brandon, C; Gill, D P

2017-07-01

Winter weather conditions may negatively influence participation of older adults in daily physical activity (PA). Assess the influence of winter meteorological variables, day-time peak ambient temperature, windchill, humidity, and snow accumulation on the ground to accelerometer measured PA values in older adults. 50 community-dwelling older adults (77.4±4.7yrs; range 71-89; 12 females) living in Southwestern Ontario (Latitude 42.9°N Longitude 81.2° W) Canada, wore a waist-borne accelerometer during active waking hours (12h) for 7 consecutive days between February and April 2007. Hourly temperature, windchill, humidity, and snowfall accumulation were obtained from meteorological records and time locked to hourly accelerometer PA values. Regression analysis revealed significant relationships between time of day, ambient daytime high temperature and a humidity for participation in PA. Windchill temperature added no additional influence over PA acclamation already influenced by ambient day-time temperature and the observed variability in PA patterns relative to snow accumulation over the study period was too great to warrant its inclusion in the model. Most PA was completed in the morning hours and increased as the winter month's transitioned to spring (February through April). An equation was developed to adjust for winter weather conditions using temperature, humidity and time of day. Accurate PA assessment during the winter months must account for the ambient daytime high temperatures, humidity, and time of day. These older adults were more physically active during the morning hours and became more active as the winter season transitioned to spring. Copyright © 2017 Elsevier B.V. All rights reserved.

Variation in the hindgut microbial communities of the Florida manatee, Trichechus manatus latirostris over winter in Crystal River, Florida

Science.gov (United States)

Merson, Samuel D.; Ouwerkerk, Diane; Gulino, Lisa-Maree; Klieve, Athol; Bonde, Robert K.; Burgess, Elizabeth A.; Lanyon, Janet M.

2014-01-01

The Florida manatee, Trichechus manatus latirostris, is a hindgut-fermenting herbivore. In winter, manatees migrate to warm water overwintering sites where they undergo dietary shifts and may suffer from cold-induced stress. Given these seasonally induced changes in diet, the present study aimed to examine variation in the hindgut bacterial communities of wild manatees overwintering at Crystal River, west Florida. Faeces were sampled from 36 manatees of known sex and body size in early winter when manatees were newly arrived and then in mid-winter and late winter when diet had probably changed and environmental stress may have increased. Concentrations of faecal cortisol metabolite, an indicator of a stress response, were measured by enzyme immunoassay. Using 454-pyrosequencing, 2027 bacterial operational taxonomic units were identified in manatee faeces following amplicon pyrosequencing of the 16S rRNA gene V3/V4 region. Classified sequences were assigned to eight previously described bacterial phyla; only 0.36% of sequences could not be classified to phylum level. Five core phyla were identified in all samples. The majority (96.8%) of sequences were classified as Firmicutes (77.3 ± 11.1% of total sequences) or Bacteroidetes (19.5 ± 10.6%). Alpha-diversity measures trended towards higher diversity of hindgut microbiota in manatees in mid-winter compared to early and late winter. Beta-diversity measures, analysed through permanova, also indicated significant differences in bacterial communities based on the season.

Science & education: Genetic analysis of winter social structure and social traits in a migratory sparrow & teaching argumentation in STEM education

Science.gov (United States)

Arnberg, Nina N.

Stable social organization in a wide variety of organisms has been linked to kinship, which can minimize conflict due to the indirect fitness benefits from cooperating with relatives. In birds, kin selection has been mostly studied in the context of reproduction or in species that are social year round. Many birds however are migratory and the role of kinship in the winter societies of these species is virtually unexplored. A previous study detected striking social complexity and stability in wintering populations of migratory golden-crowned sparrows (Zonotrichia atricapilla)---individuals repeatedly form close associations with the same social partners, including across multiple winters. In chapter one I test the possibility that kinship might be involved in these close and stable social affiliations. I examine the relationship between kinship and social structure for two of the consecutive wintering seasons from the previous study. I found no evidence that social structure was influenced by kinship---relatedness between most pairs of individuals was at most that of first cousins (and mostly far lower) and Mantel tests revealed no relationship between kinship and pairwise interaction frequency. Kinship also failed to predict social structure in more fine-grained analyses, including analyses of each sex separately (in the event that sex-biased migration might limit kin selection to one sex) and separate analyses for each social community. The complex winter societies of golden-crowned sparrows appear to be based on cooperative benefits unrelated to kin selection. Although the complex social structure detected in wintering golden-crowned sparrows is not predicted by kinship, genetic variation may play a role in variation of winter social traits. In chapter two, I investigate the genetic causes of variation in fitness-related traits in a winter population of golden-crowned sparrows. Individuals show great variation in morphological and behavioral traits that may play

Microbial community production, respiration, and structure of the microbial food web of an ecosystem in the northeastern Atlantic Ocean

Science.gov (United States)

Maixandeau, Anne; LefèVre, Dominique; Karayanni, Hera; Christaki, Urania; van Wambeke, France; Thyssen, Melilotus; Denis, Michel; FernáNdez, Camila I.; Uitz, Julia; Leblanc, Karine; QuéGuiner, Bernard

2005-07-01

Gross community production (GCP), dark community respiration (DCR), and the biomass of the different size classes of organisms in the microbial community were measured in the northeastern Atlantic basin as part of the Programme Océan Multidisciplinaire Méso Echelle (POMME) project. The field experiment was conducted during three seasons (winter, spring, and late summer-fall) in 2001. Samples were collected from four different mesoscale structures within the upper 100 m. GCP rates increased from winter (101 ± 24 mmol O2 m-2 d-1) to spring (153 ± 27 mmol O2 m-2 d-1) and then decreased from spring to late summer (44 ± 18 mmol O2 m-2 d-1). DCR rates increased from winter (-47 ± 18 mmol O2 m-2 d-1) to spring (-97 ± 7 mmol O2 m-2 d-1) and then decreased from spring to late summer (50 ± 7 mmol O2 m-2 d-1). The onset of stratification depended on latitude as well as on the presence of mesoscale structures (eddies), and this largely contributed to the variability of GCP. The trophic status of the POMME area was defined as net autotrophic, with a mean annual net community production rate of +38 ± 18 mmol O2 m-2 d-1, exhibiting a seasonal variation from +2 ± 20 mmol O2 m-2 d-1 to +57 ± 20 mmol O2 m-2 d-1. This study highlights that small organisms (picoautotrophs, nanoautotrophs, and bacteria) are the main organisms contributing to biological fluxes throughout the year and that episodic blooms of microphytoplankton are related to mesoscale structures.

Influence of ocean acidification on plankton community structure during a winter-to-summer succession: An imaging approach indicates that copepods can benefit from elevated CO2 via indirect food web effects

Science.gov (United States)

Taucher, Jan; Haunost, Mathias; Boxhammer, Tim; Bach, Lennart T.; Algueró-Muñiz, María; Riebesell, Ulf

2017-01-01

Plankton communities play a key role in the marine food web and are expected to be highly sensitive to ongoing environmental change. Oceanic uptake of anthropogenic carbon dioxide (CO2) causes pronounced shifts in marine carbonate chemistry and a decrease in seawater pH. These changes–summarized by the term ocean acidification (OA)–can significantly affect the physiology of planktonic organisms. However, studies on the response of entire plankton communities to OA, which also include indirect effects via food-web interactions, are still relatively rare. Thus, it is presently unclear how OA could affect the functioning of entire ecosystems and biogeochemical element cycles. In this study, we report from a long-term in situ mesocosm experiment, where we investigated the response of natural plankton communities in temperate waters (Gullmarfjord, Sweden) to elevated CO2 concentrations and OA as expected for the end of the century (~760 μatm pCO2). Based on a plankton-imaging approach, we examined size structure, community composition and food web characteristics of the whole plankton assemblage, ranging from picoplankton to mesozooplankton, during an entire winter-to-summer succession. The plankton imaging system revealed pronounced temporal changes in the size structure of the copepod community over the course of the plankton bloom. The observed shift towards smaller individuals resulted in an overall decrease of copepod biomass by 25%, despite increasing numerical abundances. Furthermore, we observed distinct effects of elevated CO2 on biomass and size structure of the entire plankton community. Notably, the biomass of copepods, dominated by Pseudocalanus acuspes, displayed a tendency towards elevated biomass by up to 30–40% under simulated ocean acidification. This effect was significant for certain copepod size classes and was most likely driven by CO2-stimulated responses of primary producers and a complex interplay of trophic interactions that allowed this

Impact of warm winters on microbial growth

Science.gov (United States)

Birgander, Johanna; Rousk, Johannes; Axel Olsson, Pål

2014-05-01

Growth of soil bacteria has an asymmetrical response to higher temperature with a gradual increase with increasing temperatures until an optimum after which a steep decline occurs. In laboratory studies it has been shown that by exposing a soil bacterial community to a temperature above the community's optimum temperature for two months, the bacterial community grows warm-adapted, and the optimum temperature of bacterial growth shifts towards higher temperatures. This result suggests a change in the intrinsic temperature dependence of bacterial growth, as temperature influenced the bacterial growth even though all other factors were kept constant. An intrinsic temperature dependence could be explained by either a change in the bacterial community composition, exchanging less tolerant bacteria towards more tolerant ones, or it could be due to adaptation within the bacteria present. No matter what the shift in temperature tolerance is due to, the shift could have ecosystem scale implications, as winters in northern Europe are getting warmer. To address the question of how microbes and plants are affected by warmer winters, a winter-warming experiment was established in a South Swedish grassland. Results suggest a positive response in microbial growth rate in plots where winter soil temperatures were around 6 °C above ambient. Both bacterial and fungal growth (leucine incorporation, and acetate into ergosterol incorporation, respectively) appeared stimulated, and there are two candidate explanations for these results. Either (i) warming directly influence microbial communities by modulating their temperature adaptation, or (ii) warming indirectly affected the microbial communities via temperature induced changes in bacterial growth conditions. The first explanation is in accordance with what has been shown in laboratory conditions (explained above), where the differences in the intrinsic temperature relationships were examined. To test this explanation the

Influence of Mowing Artemisia tridentata ssp. wyomingensis on Winter Habitat for Wildlife

Science.gov (United States)

Davies, Kirk W.; Bates, Jonathan D.; Johnson, Dustin D.; Nafus, Aleta M.

2009-07-01

Mowing is commonly implemented to Artemisia tridentata ssp. wyomingensis (Beetle & A. Young) S.L. Welsh (Wyoming big sagebrush) plant communities to improve wildlife habitat, increase forage production for livestock, and create fuel breaks for fire suppression. However, information detailing the influence of mowing on winter habitat for wildlife is lacking. This information is crucial because many wildlife species depended on A. tridentata spp. wyomingensis plant communities for winter habitat and consume significant quantities of Artemisia during this time . Furthermore, information is generally limited describing the recovery of A. tridentata spp. wyomingensis to mowing and the impacts of mowing on stand structure. Stand characteristics and Artemisia leaf tissue crude protein (CP), acid detergent fiber (ADF), and neutral detergent fiber (NDF) concentrations were measured in midwinter on 0-, 2-, 4-, and 6-year-old fall-applied mechanical (mowed at 20 cm height) treatments and compared to adjacent untreated (control) areas. Mowing compared to the control decreased Artemisia cover, density, canopy volume, canopy elliptical area, and height ( P < 0.05), but all characteristics were recovering ( P < 0.05). Mowing A. tridentata spp. wyomingensis plant communities slightly increases the nutritional quality of Artemisia leaves ( P < 0.05), but it simultaneously results in up to 20 years of decrease in Artemisia structural characteristics. Because of the large reduction in A. tridentata spp. wyomingensis for potentially 20 years following mowing, mowing should not be applied in Artemisia facultative and obligate wildlife winter habitat. Considering the decline in A. tridentata spp. wyomingensis-dominated landscapes, we caution against mowing these communities.

Leveraging disjoint communities for detecting overlapping community structure

International Nuclear Information System (INIS)

Chakraborty, Tanmoy

2015-01-01

Network communities represent mesoscopic structure for understanding the organization of real-world networks, where nodes often belong to multiple communities and form overlapping community structure in the network. Due to non-triviality in finding the exact boundary of such overlapping communities, this problem has become challenging, and therefore huge effort has been devoted to detect overlapping communities from the network.In this paper, we present PVOC (Permanence based Vertex-replication algorithm for Overlapping Community detection), a two-stage framework to detect overlapping community structure. We build on a novel observation that non-overlapping community structure detected by a standard disjoint community detection algorithm from a network has high resemblance with its actual overlapping community structure, except the overlapping part. Based on this observation, we posit that there is perhaps no need of building yet another overlapping community finding algorithm; but one can efficiently manipulate the output of any existing disjoint community finding algorithm to obtain the required overlapping structure. We propose a new post-processing technique that by combining with any existing disjoint community detection algorithm, can suitably process each vertex using a new vertex-based metric, called permanence, and thereby finds out overlapping candidates with their community memberships. Experimental results on both synthetic and large real-world networks show that PVOC significantly outperforms six state-of-the-art overlapping community detection algorithms in terms of high similarity of the output with the ground-truth structure. Thus our framework not only finds meaningful overlapping communities from the network, but also allows us to put an end to the constant effort of building yet another overlapping community detection algorithm. (paper)

The community structure of over-wintering larval and small juvenile fish in a large estuary

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Munk, Peter; Cardinale, Massimiliano; Casini, Michele; Rudolphi, Ann-Christin

2014-02-01

The Skagerrak and Kattegat are estuarine straits of high hydrographical and ecological diversity, situated between the saline waters of the North Sea and the brackish waters of the Baltic Sea. These sustain important nursery grounds of many fish species, of which several overwinter during the larval and early juvenile stages. In order to give more insight into the communities of the overwintering ichthyoplankton in estuarine areas, we examine an annual series of observations from a standard survey carried out 1992-2010. Species differences and annual variability in distributions and abundances are described, and linkages between ichthyoplankton abundances and corresponding hydrographical information are analysed by GAM methods. Communities were dominated by herring, gobies, butterfish, sprat, pipefishes, lemon sole and European eel (i.e. glass eel), and all the sampled species showed large annual fluctuations in abundances. The species showed quite specific patterns of distribution although species assemblages with common distributional characteristics were identified. Within these assemblages, the ichthyoplankton abundances showed linkage to environmental characteristics described by bottom-depth and surface temperature and salinity. Hence the study points to a significant structuring of overwintering ichthyoplankton communities in large estuaries, based on the species habitat choice and its response to physical gradients.

Change of Landscape Structure before and after Winter Olympic Games in Nagano City

Science.gov (United States)

Fujii, Yoshio; Takeda, Toshiharu

Recently it is desirable to realize the conservation of biodiversity and to create the city with symbiosis with nature even in local city. In this study, we chose Nagano City which was the site of the Winter Olympic Games as the subject of study, investigated the change of land cover by using Landsat TM data of the year 1985 and 1999 which were before and after the Winter Olympic Games, and grasped the change of landscape structure quantitatively by using landscape indices. As a result, we obtained the following conclusions. The expansion of urban area proceeded rapidly before and after the Winter Olympic Games. The area of artificial land cover in the city planning area has increased by 57%. In the meantime the areas of upland field and paddy field have decreased by 45% and 50% respectively. Therefore, agricultural land changed into urban area remarkably. It was found that the shape of paches of paddy field and upland field especially became small and the inequality of the paches decreased before and after the Winter Olympic Games. It became clear that the fragmentation has occurred in agricultural land such as paddy field, upland field and orchard.

Seasonal dynamics of ant community structure in the Moroccan Argan Forest.

Science.gov (United States)

El Keroumi, Abderrahim; Naamani, Khalid; Soummane, Hassna; Dahbi, Abdallah

2012-01-01

In this study we describe the structure and composition of ant communities in the endemic Moroccan Argan forest, using pitfall traps sampling technique throughout the four seasons between May 2006 and February 2007. The study focused on two distinct climatic habitats within the Essaouira Argan forest, a semi-continental site at Lahssinate, and a coastal site at Boutazarte. Thirteen different ant species were identified, belonging to seven genera. Monomorium subopacum Smith and Tapinoma simrothi Krausse-Heldrungen (Hymenoptera: Formicidae) were the most abundant and behaviorally dominant ant species in the arganeraie. In addition, more specimens were captured in the semi-continental site than in the coastal area. However, no significant difference was observed in species richness, evenness, or diversity between both sites. Composition and community structure showed clear seasonal dynamics. The number of species, their abundance, their diversity, and their evenness per Argan tree were significantly dissimilar among seasons. The richness (except between summer and autumn), and the abundance and the evenness of ant species among communities, showed a significant difference between the dry period (summer and spring) and the rainy period (winter and autumn). Higher abundance and richness values occurred in the dry period of the year. Ant species dominance and seasonal climatic variations in the arganeraie might be among the main factors affecting the composition, structure, and foraging activity of ant communities. This study, together with recent findings on ant predation behavior below Argan trees, highlights the promising use of dominant ant species as potential agents of Mediterranean fruit fly bio-control in the Argan forest and surrounding ecosystems.

[Community structure of soil meso- and micro-fauna in different habitats of urbanized region].

Science.gov (United States)

Qin, Zhong; Zhang, Jia-en; Li, Qing-fang

2009-12-01

Investigations were made in May, June, and November 2007 and January 2008 to study the structural characteristics and their seasonal variations of soil meso- and micro-fauna communities in six habitats of three land use types (forest land, constructed grassland and farmland) in Tianhe District of Guangzhou City. The horizontal spatial distribution of soil fauna differed with habitat. During the investigation periods, the Botanical Garden of South China Agricultural University had the highest individual number (1286) of soil mesa- and micro-fauna, while the farmland, especially in the Fenghuang Street area, had the lowest number of individuals and groups. The seasonal variation of the individual number was in order of autumn (1815) > spring (1623) > winter (1365) > summer (1276). Hierarchical clustering and detrended correspondence analysis also showed that the community composition of soil meso- and micro-fauna in different habitats exhibited distinct seasonal variation. In the same seasons, the community structure and composition of soil meso- and micro-fauna in different habitats were correlated to the degrees of human interferences and the properties of soil environment.

Effect of different levels of nitrogen on rhizosphere bacterial community structure in intensive monoculture of greenhouse lettuce.

Science.gov (United States)

Li, Jian-Gang; Shen, Min-Chong; Hou, Jin-Feng; Li, Ling; Wu, Jun-Xia; Dong, Yuan-Hua

2016-04-28

Pyrosequencing-based analyses revealed significant effects among low (N50), medium (N80), and high (N100) fertilization on community composition involving a long-term monoculture of lettuce in a greenhouse in both summer and winter. The non-fertilized control (CK) treatment was characterized by a higher relative abundance of Actinobacteria, Acidobacteria, and Chloroflexi; however, the average abundance of Firmicutes typically increased in summer, and the relative abundance of Bacteroidetes increased in winter in the N-fertilized treatments. Principle component analysis showed that the distribution of the microbial community was separated by a N gradient with N80 and N100 in the same group in the summer samples, while CK and N50 were in the same group in the winter samples, with the other N-level treatments existing independently. Redundancy analysis revealed that available N, NO3(-)-N, and NH4(+)-N, were the main environmental factors affecting the distribution of the bacterial community. Correlation analysis showed that nitrogen affected the shifts of microbial communities by strongly driving the shifts of Firmicutes, Bacteroidetes, and Proteobacteria in summer samples, and Bacteroidetes, Actinobacteria, and Acidobacteria in winter samples. The study demonstrates a novel example of rhizosphere bacterial diversity and the main factors influencing rizosphere microbial community in continuous vegetable cropping within an intensive greenhouse ecosystem.

Effect of different levels of nitrogen on rhizosphere bacterial community structure in intensive monoculture of greenhouse lettuce

Science.gov (United States)

Li, Jian-Gang; Shen, Min-Chong; Hou, Jin-Feng; Li, Ling; Wu, Jun-Xia; Dong, Yuan-Hua

2016-04-01

Pyrosequencing-based analyses revealed significant effects among low (N50), medium (N80), and high (N100) fertilization on community composition involving a long-term monoculture of lettuce in a greenhouse in both summer and winter. The non-fertilized control (CK) treatment was characterized by a higher relative abundance of Actinobacteria, Acidobacteria, and Chloroflexi; however, the average abundance of Firmicutes typically increased in summer, and the relative abundance of Bacteroidetes increased in winter in the N-fertilized treatments. Principle component analysis showed that the distribution of the microbial community was separated by a N gradient with N80 and N100 in the same group in the summer samples, while CK and N50 were in the same group in the winter samples, with the other N-level treatments existing independently. Redundancy analysis revealed that available N, NO3--N, and NH4+-N, were the main environmental factors affecting the distribution of the bacterial community. Correlation analysis showed that nitrogen affected the shifts of microbial communities by strongly driving the shifts of Firmicutes, Bacteroidetes, and Proteobacteria in summer samples, and Bacteroidetes, Actinobacteria, and Acidobacteria in winter samples. The study demonstrates a novel example of rhizosphere bacterial diversity and the main factors influencing rizosphere microbial community in continuous vegetable cropping within an intensive greenhouse ecosystem.

Legal immigrants: invasion of alien microbial communities during winter occurring desert dust storms.

Science.gov (United States)

Weil, Tobias; De Filippo, Carlotta; Albanese, Davide; Donati, Claudio; Pindo, Massimo; Pavarini, Lorenzo; Carotenuto, Federico; Pasqui, Massimiliano; Poto, Luisa; Gabrieli, Jacopo; Barbante, Carlo; Sattler, Birgit; Cavalieri, Duccio; Miglietta, Franco

2017-03-10

A critical aspect regarding the global dispersion of pathogenic microorganisms is associated with atmospheric movement of soil particles. Especially, desert dust storms can transport alien microorganisms over continental scales and can deposit them in sensitive sink habitats. In winter 2014, the largest ever recorded Saharan dust event in Italy was efficiently deposited on the Dolomite Alps and was sealed between dust-free snow. This provided us the unique opportunity to overcome difficulties in separating dust associated from "domestic" microbes and thus, to determine with high precision microorganisms transported exclusively by desert dust. Our metagenomic analysis revealed that sandstorms can move not only fractions but rather large parts of entire microbial communities far away from their area of origin and that this microbiota contains several of the most stress-resistant organisms on Earth, including highly destructive fungal and bacterial pathogens. In particular, we provide first evidence that winter-occurring dust depositions can favor a rapid microbial contamination of sensitive sink habitats after snowmelt. Airborne microbial depositions accompanying extreme meteorological events represent a realistic threat for ecosystem and public health. Therefore, monitoring the spread and persistence of storm-travelling alien microbes is a priority while considering future trajectories of climatic anomalies as well as anthropogenically driven changes in land use in the source regions.

The structure and dynamics of a rhinolophid bat community of Latium (Central Italy (Chiroptera

Directory of Open Access Journals (Sweden)

Pierangelo Crucitti

1998-12-01

Full Text Available Abstract The present paper summarizes the results of 3 years of observation made at six month intervals for six months at a time (18 field surveys in a man-made cave in Northern Latium (Central Italy from April 1992 to April 1995. Its aim is to analyze the main structural and dynamic features of a bat community which hibernates at the shelter. Rhinolophus ferrumequinum and especially Rhinolophus euryale are the most abundant species. Population dynamics of both species as well as that of Rhinoluphus hipposideros show higher levels of abundance between December and February of each semester. In mid-winter, large and sometimes mixed aggregations of Rhinolophus ferrumequinum and Rhinolophus euryale in deep hypothermia occur. A small number of Rhinolophus hipposideros, mainly adult males, was observed. The paper compares the structure of this community to the structure of another community of the same district which has been previously analyzed, in which Vespertilionidae, especially Miniopterus schreibersi, are much more abundant. Despite the difference in species composition, body size was found to be a significant and common feature (as highlighted by forearm length, of the dominant species in both communities, Rhinolophus euryale and Miniopterus schreibersi respectively.

Structure of bacterial communities in soil following cover crop and organic fertilizer incorporation.

Science.gov (United States)

Fernandez, Adria L; Sheaffer, Craig C; Wyse, Donald L; Staley, Christopher; Gould, Trevor J; Sadowsky, Michael J

2016-11-01

Incorporation of organic material into soils is an important element of organic farming practices that can affect the composition of the soil bacterial communities that carry out nutrient cycling and other functions crucial to crop health and growth. We conducted a field experiment to determine the effects of cover crops and fertilizers on bacterial community structure in agricultural soils under long-term organic management. Illumina sequencing of 16S rDNA revealed diverse communities comprising 45 bacterial phyla in corn rhizosphere and bulk field soil. Community structure was most affected by location and by the rhizosphere effect, followed by sampling time and amendment treatment. These effects were associated with soil physicochemical properties, including pH, moisture, organic matter, and nutrient levels. Treatment differences were apparent in bulk and rhizosphere soils at the time of peak corn growth in the season following cover crop and fertilizer application. Cover crop and fertilizer treatments tended to lower alpha diversity in early season samples. However, winter rye, oilseed radish, and buckwheat cover crop treatments increased alpha diversity in some later season samples compared to a no-amendment control. Fertilizer treatments and some cover crops decreased relative abundance of members of the ammonia-oxidizing family Nitrosomonadaceae. Pelleted poultry manure and Sustane® (a commercial fertilizer) decreased the relative abundance of Rhizobiales. Our data point to a need for future research exploring how (1) cover crops influence bacterial community structure and functions, (2) these effects differ with biomass composition and quantity, and (3) existing soil conditions and microbial community composition influence how soil microbial populations respond to agricultural management practices.

Winter-to-winter variations in indoor radon

International Nuclear Information System (INIS)

Mose, D.G.; Mushrush, G.W.; Kline, S.W.

1989-01-01

Indoor radon concentrations in northern Virginia and central Maryland show a strong dependence on weather. Winter tends to be associated with higher than average indoor radon, and summer with lower than average. However, compared to the winter of 1986-1987, the winter of 1987-1988 was warmer and drier. Consequently, winter-to-winter indoor radon decreased by about 25%. This winter-to-winter decrease is unexpectedly large, and simulates winter-to-summer variations that have been reported

Response of bacterial community structure to seasonal fluctuation and anthropogenic pollution on coastal water of Alang-Sosiya ship breaking yard, Bhavnagar, India.

Science.gov (United States)

Patel, Vilas; Munot, Hitendra; Shouche, Yogesh S; Madamwar, Datta

2014-06-01

Bacterial community structure was analyzed from coastal water of Alang-Sosiya ship breaking yard (ASSBY), world's largest ship breaking yard, near Bhavnagar, using 16S rRNA gene sequencing (cultured dependent and culture independent). In clone libraries, total 2324 clones were retrieved from seven samples (coastal water of ASSBY for three seasons along with one pristine coastal water) which were grouped in 525 operational taxonomic units. Proteobacteria was found to be dominant in all samples. In pristine samples, Gammaproteobacteria was found to be dominant, whereas in polluted samples dominancy of Gammaproteobacteria has shifted to Betaproteobacteria and Epsilonproteobacteria. Richness and diversity indices also indicated that bacterial community in pristine sample was the most diverse followed by summer, monsoon and winter samples. To the best of knowledge, this is the first study describing bacterial community structure from coastal water of ASSBY, and it suggests that seasonal fluctuation and anthropogenic pollutions alters the bacterial community structure. Copyright © 2014 Elsevier Ltd. All rights reserved.

Imported anthropogenic bacteria may survive the Antarctic winter and introduce new genes into local bacterial communities

Directory of Open Access Journals (Sweden)

Brat Kristian

2016-03-01

Full Text Available We studied dynamic changes in anthropogenic bacterial communities at a summer-operated Czech research base (the Mendel Research Station in the Antarctic during 2012 and 2013. We observed an increase in total numbers of detected bacteria between the beginning and the end of each stay in the Antarctic. In the first series of samples, bacteria of Bacillus sp. predominated. Surprisingly, high numbers of Gram-positive cocci and coliforms were found (including opportunistic human pathogens, although the conditions for bacterial life were unfavourable (Antarctic winter. In the second series of samples, coliforms and Gram-positive cocci predominated. Dangerous human pathogens were also detected. Yersinia enterocolitica was identified as serotype O:9. Antibiotic susceptibility testing showed medium-to-high resistance rates to ampicillin, cefalotin, cefuroxime, amoxicillin-clavulanate and gentamicin in Enterobacteriaceae. 16S rRNA sequencing showed high rates of accordance between nucleotide sequences among the tested strains. Three conclusions were drawn: (1 Number of anthropogenic bacteria were able to survive the harsh conditions of the Antarctic winter (inside and outside the polar station. Under certain circumstances (e.g. impaired immunity, the surviving bacteria might pose a health risk to the participants of future expeditions or to other visitors to the base. (2 The bacteria released into the outer environment might have impacts on local ecosystems. (3 New characteristics (e.g. resistance to antibiotics may be introduced into local bacterial communities.

Seasonal variations of microbial community in a full scale oil field produced water treatment plant

Directory of Open Access Journals (Sweden)

Q. Xie

2016-01-01

Full Text Available This study investigated the microbial community in a full scale anaerobic baffled reactor and sequencing batch reactor system for oil-produced water treatment in summer and winter. The community structures of fungi and bacteria were analyzed through polymerase chain reaction–denaturing gradient gel electrophoresis and Illumina high-throughput sequencing, respectively. Chemical oxygen demand effluent concentration achieved lower than 50 mg/L level after the system in both summer and winter, however, chemical oxygen demand removal rates after anaerobic baffled reactor treatment system were significant higher in summer than that in winter, which conformed to the microbial community diversity. Saccharomycotina, Fusarium, and Aspergillus were detected in both anaerobic baffled reactor and sequencing batch reactor during summer and winter. The fungal communities in anaerobic baffled reactor and sequencing batch reactor were shaped by seasons and treatment units, while there was no correlation between abundance of fungi and chemical oxygen demand removal rates. Compared to summer, the total amount of the dominant hydrocarbon degrading bacteria decreased by 10.2% in anaerobic baffled reactor, resulting in only around 23% of chemical oxygen demand was removed in winter. Although microbial community significantly varied in the three parallel sulfide reducing bacteria, the performance of these bioreactors had no significant difference between summer and winter.

Seasonal variations of microbial community in a full scale oil field produced water treatment plant

International Nuclear Information System (INIS)

Xie, Q.; Bai, S.; Li, Y.; Liu, L.; Wang, S.; Xi, J.

2016-01-01

This study investigated the microbial community in a full scale anaerobic baffled reactor and sequencing batch reactor system for oil-produced water treatment in summer and winter. The community structures of fungi and bacteria were analyzed through polymerase chain reaction–denaturing gradient gel electrophoresis and Illumina high throughput sequencing, respectively. Chemical oxygen demand effluent concentration achieved lower than 50 mg/L level after the system in both summer and winter, however, chemical oxygen demand removal rates after anaerobic baffled reactor treatment system were significant higher in summer than that in winter, which conformed to the microbial community diversity. Saccharomycotina, Fusarium, and Aspergillus were detected in both anaerobic baffled reactor and sequencing batch reactor during summer and winter. The fungal communities in anaerobic baffled reactor and sequencing batch reactor were shaped by seasons and treatment units, while there was no correlation between abundance of fungi and chemical oxygen demand removal rates. Compared to summer, the total amount of the dominant hydrocarbon degrading bacteria decreased by 10.2% in anaerobic baffled reactor, resulting in only around 23% of chemical oxygen demand was removed in winter. Although microbial community significantly varied in the three parallel sulfide reducing bacteria, the performance of these bioreactors had no significant difference between summer and winter.

Impact of change in winter strategy of one parasitoid species on the diversity and function of a guild of parasitoids.

Science.gov (United States)

Andrade, Thiago Oliveira; Krespi, Liliane; Bonnardot, Valérie; van Baaren, Joan; Outreman, Yannick

2016-03-01

The rise of temperatures may enable species to increase their activities during winter periods and to occupy new areas. In winter, resource density is low for most species and an increased number of active consumers during this season may produce heightened competitive pressure. In Western France, the aphid parasitoid species Aphidius avenae Haliday has been known to adopt a winter diapausing strategy adjacent to newly sown cereal crops, until recent reports of active winter populations in cereal crops. We investigate how the addition of this species to the winter guild of parasitoids may change the structure of the aphid-parasitoid food web and the host-exploitation strategies of previously occurring parasitoids. We showed that in winter, Aphidius avenae was mostly associated with two aphid species, Sitobion avenae Fabricius and Metopolophium dirhodum Walker, while the generalist species Aphidius rhopalosiphi was restricted to the aphid species Rhopalosiphum padi L. in the presence of Aphidius avenae. Due to this new competition, winter food webs present a higher degree of compartmentalization and lower proportional similarity index values than spring ones. Parasitoid and aphid abundances responded significantly to changes in daily high temperatures, suggesting that the host-parasitoid community structure can be partly predicted by climate. This study demonstrates how a change in the winter strategy of one species of a guild can modify complex interspecific relationships in host-parasitoid systems.

Phytoplankton response to winter warming modified by large-bodied zooplankton: an experimental microcosm study

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Hu He

2015-03-01

Full Text Available While several field investigations have demonstrated significant effects of cool season (winter or spring warming on phytoplankton development, the role played by large-bodied zooplankton grazers for the responses of phytoplankton to winter warming is ambiguous. We conducted an outdoor experiment to compare the effect of winter warming (heating by 3°C in combination with presence and absence of Daphnia grazing (D. similis on phytoplankton standing crops and community structure under eutrophic conditions. When Daphnia were absent, warming was associated with significant increases in phytoplankton biomass and cyanobacterial dominance. In contrast, when Daphnia were present, warming effects on phytoplankton dynamics were offset by warming-enhanced grazing, resulting in no significant change in biomass or taxonomic dominance. These results emphasize that large-bodied zooplankton like Daphnia spp. may play an important role in modulating the interactions between climate warming and phytoplankton dynamics in nutrient rich lake ecosystems.

Interannual control of plankton communities by deep winter mixing and prey/predator interactions in the NW Mediterranean: Results from a 30-year 3D modeling study

Science.gov (United States)

Auger, P. A.; Ulses, C.; Estournel, C.; Stemmann, L.; Somot, S.; Diaz, F.

2014-05-01

A realistic modeling approach is designed to address the role of winter mixing on the interannual variability of plankton dynamics in the north-western (NW) Mediterranean basin. For the first time, a high-resolution coupled hydrodynamic-biogeochemical model (Eco3m-S) covering a 30-year period (1976-2005) is validated on available in situ and satellite data for the NW Mediterranean. In this region, cold, dry winds in winter often lead to deep convection and strong upwelling of nutrients into the euphotic layer. High nutrient contents at the end of winter then support the development of a strong spring bloom of phytoplankton. Model results indicate that annual primary production is not affected by winter mixing due to seasonal balance (minimum in winter and maximum in spring). However, the total annual water column-integrated phytoplankton biomass appears to be favored by winter mixing because zooplankton grazing activity is low in winter and early spring. This reduced grazing is explained here by the rarefaction of prey due to both light limitation and the effect of mixing-induced dilution on prey/predator interactions. A negative impact of winter mixing on winter zooplankton biomass is generally simulated except for mesozooplankton. This difference is assumed to stem from the lower parameterized mortality, top trophic position and detritivorous diet of mesozooplankton in the model. Moreover, model suggests that the variability of annual mesozooplankton biomass is principally modulated by the effects of winter mixing on winter biomass. Thus, interannual variability of winter nutrient contents in the euphotic layer, resulting from winter mixing, would control spring primary production and thus annual mesozooplankton biomass. Our results show a bottom-up control of mesozooplankton communities, as observed at a coastal location of the Ligurian Sea.

Assessment of microbial communities in PM1 and PM10 of Urumqi during winter.

Science.gov (United States)

Gou, Huange; Lu, Jianjiang; Li, Shanman; Tong, Yanbin; Xie, Chunbin; Zheng, Xiaowu

2016-07-01

Recently, inhalable particulate matter has been reported to carry microorganisms responsible for human allergy and respiratory disease. The unique geographical environment and adverse weather conditions of Urumqi cause double pollution of dust and smog, but research on the microbial content of the atmosphere has not been commenced. In this study, 16S and 18S rRNA gene sequencing were conducted to investigate the microbial composition of Urumqi's PM1 and PM10 pollutants in winter. Results showed that the bacterial community is mainly composed of Proteobacteria, Firmicutes and Actinobacteria, Proteobacteria accounted for the most proportion which was significant difference in some aforementioned studies. Ascomycota and Basidiomycota constitute the main part of the fungal microbial community. The difference of bacterial relative abundance in sample point is greater than in particle sizes. The sequences of several pathogenic bacteria and opportunistic pathogens were also detected, such as Acinetobacter, Delftia, Serratia, Chryseobacterium, which may impact on immunocompromised populations (elderly, children and postoperative convalescence patients), and some fungal genera may cause several plant diseases. Our findings may serve an important reference value in the global air microbial propagation and air microbial research in desert. Copyright © 2016 Elsevier Ltd. All rights reserved.

School of Culinary Arts & Food Technology - Winter Newsletter 2017

OpenAIRE

Murphy, James Peter

2017-01-01

The School of Culinary Arts and Food Technology, Winter Newsletter captured the many events, research, awards, significant contributions and special civic and community activities which the students and staff members of the school have successfully completed leading up to the Winter period of 2017. The successful completion of these activities would not be possible without the active and on-going support of the 'INSPIRED' Friends of Culinary Arts (sponsors).

Assessment of microbial communities in PM1 and PM10 of Urumqi during winter

International Nuclear Information System (INIS)

Gou, Huange; Lu, Jianjiang; Li, Shanman; Tong, Yanbin; Xie, Chunbin; Zheng, Xiaowu

2016-01-01

Recently, inhalable particulate matter has been reported to carry microorganisms responsible for human allergy and respiratory disease. The unique geographical environment and adverse weather conditions of Urumqi cause double pollution of dust and smog, but research on the microbial content of the atmosphere has not been commenced. In this study, 16S and 18S rRNA gene sequencing were conducted to investigate the microbial composition of Urumqi's PM 1 and PM 10 pollutants in winter. Results showed that the bacterial community is mainly composed of Proteobacteria, Firmicutes and Actinobacteria, Proteobacteria accounted for the most proportion which was significant difference in some aforementioned studies. Ascomycota and Basidiomycota constitute the main part of the fungal microbial community. The difference of bacterial relative abundance in sample point is greater than in particle sizes. The sequences of several pathogenic bacteria and opportunistic pathogens were also detected, such as Acinetobacter, Delftia, Serratia, Chryseobacterium, which may impact on immunocompromised populations (elderly, children and postoperative convalescence patients), and some fungal genera may cause several plant diseases. Our findings may serve an important reference value in the global air microbial propagation and air microbial research in desert. - Highlights: • Using 16 s rDNA double variable region (V3 + V4) sequencing to elucidate the bacterial communities. • Several potential microbial allergens and pathogens present in PM 1 and PM 10 were found. • Providing a great supplement to environmental science and human health assessment.

Spectrum of winter dermatoses in rural Yemen.

Science.gov (United States)

Al-Kamel, Mohamed A

2016-05-01

Surveys that have been carried out to determine the prevalence of skin diseases in rural Yemen are scarce or not available. To investigate the spectrum of winter dermatoses in a rural Yemeni community. A retrospective study was conducted at the dermatology outpatient clinic of the Al-Helal Specialized Hospital (Radaa' district of Al Bayda' Governorate) using data analysis of 700 selected records of patients managed during four months of the 2013-14 winter season. Seven hundred patients with 730 diseases were reported in this study; the major bulk of patients (46.57%) were in the >18-40-year age group, and females outnumbered males. By far, dermatitis, eczematous, and allergic disorders (38.49%) topped the list of the most frequent skin disorders groups, followed by skin infections and infestations (20%) and the pigmentary disorders (13.70%) group. Contact dermatitis (10.68%) was the most prevalent skin disorder, followed by hyperpigmentations (8.77%), acne (8.08%), viral infections (5.75%), atopic dermatitis (5.62%), and parasitic infestations (5.34%). This survey has documented the spectrum of winter dermatoses in a rural Yemeni community but also reflects the pattern of common dermatoses in the whole country. Dermatitis, eczematous, and allergic disorders, skin infections, and pigmentary disorders are the commonest groups. Contact dermatitis is the most prevalent disorder, and leishmaniasis is the most prevalent skin infectious disease. Climate, occupational, social, and environmental factors are the main contributors. Such statistics can form an important basis for community-based health policies. © 2015 The International Society of Dermatology.

An evolving network model with community structure

International Nuclear Information System (INIS)

Li Chunguang; Maini, Philip K

2005-01-01

Many social and biological networks consist of communities-groups of nodes within which connections are dense, but between which connections are sparser. Recently, there has been considerable interest in designing algorithms for detecting community structures in real-world complex networks. In this paper, we propose an evolving network model which exhibits community structure. The network model is based on the inner-community preferential attachment and inter-community preferential attachment mechanisms. The degree distributions of this network model are analysed based on a mean-field method. Theoretical results and numerical simulations indicate that this network model has community structure and scale-free properties

The overlapping community structure of structural brain network in young healthy individuals.

Directory of Open Access Journals (Sweden)

Kai Wu

2011-05-01

Full Text Available Community structure is a universal and significant feature of many complex networks in biology, society, and economics. Community structure has also been revealed in human brain structural and functional networks in previous studies. However, communities overlap and share many edges and nodes. Uncovering the overlapping community structure of complex networks remains largely unknown in human brain networks. Here, using regional gray matter volume, we investigated the structural brain network among 90 brain regions (according to a predefined anatomical atlas in 462 young, healthy individuals. Overlapped nodes between communities were defined by assuming that nodes (brain regions can belong to more than one community. We demonstrated that 90 brain regions were organized into 5 overlapping communities associated with several well-known brain systems, such as the auditory/language, visuospatial, emotion, decision-making, social, control of action, memory/learning, and visual systems. The overlapped nodes were mostly involved in an inferior-posterior pattern and were primarily related to auditory and visual perception. The overlapped nodes were mainly attributed to brain regions with higher node degrees and nodal efficiency and played a pivotal role in the flow of information through the structural brain network. Our results revealed fuzzy boundaries between communities by identifying overlapped nodes and provided new insights into the understanding of the relationship between the structure and function of the human brain. This study provides the first report of the overlapping community structure of the structural network of the human brain.

Afforestation alters community structure of soil fungi.

Science.gov (United States)

Carson, Jennifer K; Gleeson, Deirdre B; Clipson, Nicholas; Murphy, Daniel V

2010-07-01

Relatively little is known about the effect of afforestation on soil fungal communities. This study demonstrated that afforestation altered fungal community structure and that changes were correlated to pools of soil C. Pasture at three locations on the same soil type was afforested with Eucalyptus globulus or Pinus pinaster. The structure of fungal communities under the three land uses was measured after 13y using automated ribosomal intergenic spacer analysis (ARISA). Afforestation significantly altered the structure of fungal communities. The effect of location on the structure of fungal communities was limited to pasture soils; although these contained the same plant species, the relative composition of each species varied between locations. Differences in the structure of fungal communities between pasture, E. globulus and P. pinaster were significantly correlated with changes in the amount of total organic C and microbial biomass-C in soil. Afforestation of patches of agricultural land may contribute to conserving soil fungi in agricultural landscapes by supporting fungal communities with different composition to agricultural soils. Copyright © 2010 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

Co-existence of Anaerobic Ammonium Oxidation Bacteria and Denitrifying Anaerobic Methane Oxidation Bacteria in Sewage Sludge: Community Diversity and Seasonal Dynamics

DEFF Research Database (Denmark)

Xu, Sai; Lu, Wenjing; Mustafa, Muhammad Farooq

2017-01-01

Anaerobic ammonium oxidation (ANAMMOX) and denitrifying anaerobic methane oxidation (DAMO) have been recently discovered as relevant processes in the carbon and nitrogen cycles of wastewater treatment plants. In this study, the seasonal dynamics of ANAMMOX and DAMO bacterial community structures......, and an unknown cluster was primarily detected in autumn and winter. Similar patterns of seasonal variation in the community structure of DAMO bacteria were also observed. Group B was the dominant in spring and summer, whereas in autumn and winter, group A and group B presented almost the same proportion...

Epidemic spreading on complex networks with community structures

NARCIS (Netherlands)

Stegehuis, C.; van der Hofstad, R.W.; van Leeuwaarden, J.S.H.

2016-01-01

Many real-world networks display a community structure. We study two random graph models that create a network with similar community structure as a given network. One model preserves the exact community structure of the original network, while the other model only preserves the set of communities

The structure of microbial community in aggregates of a typical chernozem aggregates under contrasting variants of its agricultural use

Science.gov (United States)

Ivanova, E. A.; Kutovaya, O. V.; Tkhakakhova, A. K.; Chernov, T. I.; Pershina, E. V.; Markina, L. G.; Andronov, E. E.; Kogut, B. M.

2015-11-01

The taxonomic structure of microbiomes in aggregates of different sizes from typical chernozems was investigated using sequencing of the 16S rRNA gene. The aggregate fractions of 7 mm obtained by sieving of the soil samples at natural moisture were used for analysis. The highest prokaryote biomass (bacteria, archaea) was determined in the fractions permanent black fallow > permanent winter wheat. The greatest number of fungi was recorded in the fraction wheat. The system of agricultural use affected more significantly the structure of the prokaryote community in the chernozem than the size of aggregate fractions did. The most diverse microbial community was recorded in the soil samples of the fallow; the statistically significant maximums of the Shannon diversity indices and indices of phylogenetic diversity (PD) were recorded in the fractions <0.25 and 2-5 mm from the fallow soil. On the whole, the fine soil fractions (<0.25 mm) were characterized by higher diversity indices in comparison with those of the coarser aggregate fractions.

Editorial - The winter Atomiades

CERN Multimedia

Staff Association

2011-01-01

As we wrote in our previous editorial, the Staff Association gives direct support to sports events, such as the Atomiades, a section of the Association of Sports Communities of European Research Institutes, which brings together sportsmen and women from 38 European research centres in 13 countries (Austria, Belgium, Czech Republic, United Kingdom, Finland, France, Germany, Hungary, Italy, Luxemburg, the Netherlands, Russia, and Switzerland). The summer Atomiades take place between the months of June and September every three years. Thirteen such events have taken place since 1973, the last one in June 2009 in Berlin. As far as the winter Atomiades are concerned, also organized every three years, and alternating with the summer Atomiades, there have been eleven since 1981, the last one at the end of January this year in neighbouring France. The following article tells the wonderful adventure of the CERN staff who took part in this event. A positive outcome for CERN skiers at the winter Atomiades The 11t...

Indoor Heating Drives Water Bacterial Growth and Community Metabolic Profile Changes in Building Tap Pipes during the Winter Season.

Science.gov (United States)

Zhang, Hai-Han; Chen, Sheng-Nan; Huang, Ting-Lin; Shang, Pan-Lu; Yang, Xiao; Ma, Wei-Xing

2015-10-27

The growth of the bacterial community harbored in indoor drinking water taps is regulated by external environmental factors, such as indoor temperature. However, the effect of indoor heating on bacterial regrowth associated with indoor drinking water taps is poorly understood. In the present work, flow cytometry and community-level sole-carbon-source utilization techniques were combined to explore the effects of indoor heating on water bacterial cell concentrations and community carbon metabolic profiles in building tap pipes during the winter season. The results showed that the temperature of water stagnated overnight ("before") in the indoor water pipes was 15-17 °C, and the water temperature decreased to 4-6 °C after flushing for 10 min ("flushed"). The highest bacterial cell number was observed in water stagnated overnight, and was 5-11 times higher than that of flushed water. Meanwhile, a significantly higher bacterial community metabolic activity (AWCD590nm) was also found in overnight stagnation water samples. The significant "flushed" and "taps" values indicated that the AWCD590nm, and bacterial cell number varied among the taps within the flushed group (p heating periods.

Temporal dynamics of fish communities on an exposed shoreline in Hawaii

Science.gov (United States)

Friedlander, A.M.; Parrish, J.D.

1998-01-01

Environmental conditions on higher latitude coral reefs can be extremely variable, and may structure fish communities in ways not previously observed in the more stable, low latitude locations where communities have usually been studied. Temporal changes in fish community structure were examined in an intensive two-year study of the reef fishes of Hanalei Bay, Kauai, Hawaii. Hanalei Bay is directly exposed to winter swells with high surf, as well as frequent heavy winter rainfall and high river discharge. Twenty-two transects (25 x 5 m) were established in a wide variety of habitats and censused monthly (N = 1052 censuses). Over 121 000 sightings of individuals from 150 species were made during the study. Seasonal patterns in number of species, number of individuals, species diversity, and evenness were observed, with winter values usually lowest. Values of these ensemble variables tended to be higher at deeper sites and at sites with greater habitat complexity. Surf height and degree of wave exposure were negatively correlated with several measures of community organization. Groups of fishes with different levels of spatial mobility tended to occupy depths consistent with their various abilities to respond to events of heavy weather. The rank abundance of fish taxa tended to be more stable seasonally at sites with less exposure to high wave energy. These seasonal effects may suggest some type of short-range movement from more exposed and monotypic habitats to locations that are deeper or otherwise provide refuge from seasonally heavy seas.

Long-term survey of heavy-metal pollution, biofilm contamination and diatom community structure in the Riou Mort watershed, South-West France

International Nuclear Information System (INIS)

Morin, S.; Duong, T.T.; Dabrin, A.; Coynel, A.; Herlory, O.; Baudrimont, M.; Delmas, F.; Durrieu, G.; Schaefer, J.; Winterton, P.; Blanc, G.; Coste, M.

2008-01-01

In a metal-polluted stream in the Riou Mort watershed in SW France, periphytic biofilm was analyzed for diatom cell densities and taxonomic composition, dry weight and metal bio-accumulation (cadmium and zinc). Periphytic diatom communities were affected by the metal but displayed induced tolerance, seen through structural impact (dominance of small, adnate species) as well as morphological abnormalities particularly in the genera Ulnaria and Fragilaria. Species assemblages were characterized by taxa known to occur in metal-polluted environments, and shifts in the community structure expressed seasonal patterns: high numbers of Eolimna minima, Nitzschia palea and Pinnularia parvulissima were recorded in Summer and Autumn, whereas the species Surirella brebissonii, Achnanthidium minutissimum, Navicula lanceolata and Surirella angusta were dominant in Winter and Spring. Commonly used indices such as the Shannon diversity index and Specific Pollution Sensitivity Index reflected the level of pollution and suggest seasonal periodicity, the lowest diversities being observed in Summer. - Periphytic biofilm diatom communities are suitable indicators for the bioassay of elevated levels of metals in contaminated river water

Titan's Emergence from Winter

Science.gov (United States)

Flasar, F. Michael; Achterberg, Richard; Jennings, Donald; Schinder, Paul

2011-01-01

We summarize the changes in Titans thermal structure derived from Cassini CIRS and radio-occultation data during the transition from winter to early spring. Titan's surface, and middle atmosphere show noticeable seasonal change, whereas that in most of the troposphere is mated. This can be understood in terms of the relatively small radiative relaxation time in the middle atmosphere and much larger time scale in the troposphere. The surface exhibits seasonal change because the heat capacity in an annual skin depth is much smaller than that in the lowest scale height of the troposphere. Surface temperatures rise 1 K at raid and high latitudes in the winter northern hemisphere and cool in the southern hemisphere. Changes in in the middle atmosphere are more complicated. Temperatures in the middle stratosphere (approximately 1 mbar) increase by a few kelvin at mid northern latitudes, but those at high latitudes first increase as that region moves out of winter shadow, and then decrease. This probably results from the combined effect of increased solar heating as the suit moves higher in the sky and the decreased adiabatic warming as the sinking motions associated with the cross-equatorial meridional cell weaken. Consistent with this interpretation, the warm temperatures observed higher up at the winter polar stratopause cool significantly.

The effects of winter recreation on alpine and subalpine fauna: a systematic review and meta-analysis.

Directory of Open Access Journals (Sweden)

Chloe F Sato

Full Text Available The ski industry is often perceived as having a negative impact on sensitive alpine and subalpine communities. However, empirical evidence of such impacts is lacking. We reviewed the available literature from the last 35 years to quantify the reported effects of winter recreation on faunal communities. Overall, using one-sample binomial tests ('sign tests' we found that the effects of all types of winter recreation-related disturbances (i.e. ski runs, resort infrastructure and winter tourism were more likely to be negative or have no effect, than be positive for wildlife. More specifically, in Europe, where the majority of the available research was conducted, the impacts of winter recreation were most often negative for fauna. In terms of specific taxa, birds and to a lesser extent mammals and arthropods, responded negatively to disturbance. Results from our meta-analysis confirmed the results from our binomial tests. Richness, abundance and diversity of fauna were lower in areas affected by winter recreation when compared with undisturbed areas. For most regions and taxa, however, empirical evidence remains too limited to identify clear impacts of winter recreation. We therefore conclude that the majority of ski resorts are operating in the absence of knowledge needed to inform effective strategies for biodiversity conservation and ecologically-sound management. Thus, there is an urgent need for more empirical research to be conducted throughout this increasingly threatened ecological community, especially given the indication from the available literature that fauna often respond negatively to winter recreation.

The importance of agricultural lands for Himalayan birds in winter.

Science.gov (United States)

Elsen, Paul R; Kalyanaraman, Ramnarayan; Ramesh, Krishnamurthy; Wilcove, David S

2017-04-01

The impacts of land-use change on biodiversity in the Himalayas are poorly known, notwithstanding widespread deforestation and agricultural intensification in this highly biodiverse region. Although intact primary forests harbor many Himalayan birds during breeding, a large number of bird species use agricultural lands during winter. We assessed how Himalayan bird species richness, abundance, and composition during winter are affected by forest loss stemming from agriculture and grazing. Bird surveys along 12 elevational transects within primary forest, low-intensity agriculture, mixed subsistence agriculture, and intensively grazed pastures in winter revealed that bird species richness and abundance were greatest in low-intensity and mixed agriculture, intermediate in grazed pastures, and lowest in primary forest at both local and landscape scales; over twice as many species and individuals were recorded in low-intensity agriculture than in primary forest. Bird communities in primary forests were distinct from those in all other land-use classes, but only 4 species were unique to primary forests. Low-, medium-, and high-intensity agriculture harbored 32 unique species. Of the species observed in primary forest, 80% had equal or greater abundance in low-intensity agricultural lands, underscoring the value of these lands in retaining diverse community assemblages at high densities in winter. Among disturbed landscapes, bird species richness and abundance declined as land-use intensity increased, especially in high-intensity pastures. Our results suggest that agricultural landscapes are important for most Himalayan bird species in winter. But agricultural intensification-especially increased grazing-will likely result in biodiversity losses. Given that forest reserves alone may inadequately conserve Himalayan birds in winter, comprehensive conservation strategies in the region must go beyond protecting intact primary forests and ensure that low-intensity agricultural

Late winter under ice pelagic microbial communities in the high Arctic Ocean and the impact of short-term exposure to elevated CO2 levels

Directory of Open Access Journals (Sweden)

Adam eMonier

2014-09-01

Full Text Available Polar Oceans are natural CO2 sinks because of the enhanced solubility of CO2 in cold water. The Arctic Ocean is at additional risk of accelerated ocean acidification (OA because of freshwater inputs from sea ice and rivers, which influence the carbonate system. Winter conditions in the Arctic are of interest because of both cold temperatures and limited CO2 venting to the atmosphere when sea ice is present. Earlier OA experiments on Arctic microbial communities conducted in the absence of ice cover, hinted at shifts in taxa dominance and diversity under lowered pH. The Catlin Arctic Survey provided an opportunity to conduct in situ, under-ice, OA experiments during late Arctic winter. Seawater was collected from under the sea ice off Ellef Ringnes Island, and communities were exposed to three CO2 levels for 6 days. Phylogenetic diversity was greater in the attached fraction compared to the free-living fraction in situ, in the controls and in the treatments. The dominant taxa in all cases were Gammaproteobacteria but acidification had little effect compared to the effects of containment. Phylogenetic net relatedness indices suggested that acidification may have decreased the diversity within some bacterial orders, but overall there was no clear trend. Within the experimental communities, alkalinity best explained the variance among samples and replicates, suggesting subtle changes in the carbonate system need to be considered in such experiments. We conclude that under ice communities have the capacity to respond either by selection or phenotypic plasticity to heightened CO2 levels over the short term.

Research on Community Structure in Bus Transport Networks

International Nuclear Information System (INIS)

Yang Xuhua; Wang Bo; Sun Youxian

2009-01-01

We abstract the bus transport networks (BTNs) to two kinds of complex networks with space L and space P methods respectively. Using improved community detecting algorithm (PKM agglomerative algorithm), we analyze the community property of two kinds of BTNs graphs. The results show that the BTNs graph described with space L method have obvious community property, but the other kind of BTNs graph described with space P method have not. The reason is that the BTNs graph described with space P method have the intense overlapping community property and general community division algorithms can not identify this kind of community structure. To overcome this problem, we propose a novel community structure called N-depth community and present a corresponding community detecting algorithm, which can detect overlapping community. Applying the novel community structure and detecting algorithm to a BTN evolution model described with space P, whose network property agrees well with real BTNs', we get obvious community property. (general)

Epidemics in adaptive networks with community structure

Science.gov (United States)

Shaw, Leah; Tunc, Ilker

2010-03-01

Models for epidemic spread on static social networks do not account for changes in individuals' social interactions. Recent studies of adaptive networks have modeled avoidance behavior, as non-infected individuals try to avoid contact with infectives. Such models have not generally included realistic social structure. Here we study epidemic spread on an adaptive network with community structure. We model the effect of heterogeneous communities on infection levels and epidemic extinction. We also show how an epidemic can alter the community structure.

Co-existence of Anaerobic Ammonium Oxidation Bacteria and Denitrifying Anaerobic Methane Oxidation Bacteria in Sewage Sludge: Community Diversity and Seasonal Dynamics.

Science.gov (United States)

Xu, Sai; Lu, Wenjing; Mustafa, Muhammad Farooq; Caicedo, Luis Miguel; Guo, Hanwen; Fu, Xindi; Wang, Hongtao

2017-11-01

Anaerobic ammonium oxidation (ANAMMOX) and denitrifying anaerobic methane oxidation (DAMO) have been recently discovered as relevant processes in the carbon and nitrogen cycles of wastewater treatment plants. In this study, the seasonal dynamics of ANAMMOX and DAMO bacterial community structures and their abundance in sewage sludge collected from wastewater treatment plants were analysed. Results indicated that ANAMMOX and DAMO bacteria co-existed in sewage sludge in different seasons and their abundance was positively correlated (P bacteria in autumn and winter indicated that these seasons were the preferred time to favour the growth of ANAMMOX and DAMO bacteria. The community structure of ANNAMOX and DAMO bacteria could also shift with seasonal changes. The "Candidatus Brocadia" genus of ANAMMOX bacteria was mainly recovered in spring and summer, and an unknown cluster was primarily detected in autumn and winter. Similar patterns of seasonal variation in the community structure of DAMO bacteria were also observed. Group B was the dominant in spring and summer, whereas in autumn and winter, group A and group B presented almost the same proportion. The redundancy analysis revealed that pH and nitrate were the most significant factors affecting community structures of these two groups (P < 0.01). This study reported the diversity of ANAMMOX and DAMO in wastewater treatment plants that may be the basis for new nitrogen removal technologies.

Seasonal changes in the vertical distribution and community structure of Antarctic macrozooplankton and mikronekton

NARCIS (Netherlands)

Flores, H.; Hunt, B.P.V.; Kruse, S.; Pakhomov, E.A.; Siegel, V.; Franeker, van J.A.; Strass, V.; Putte, van de A.P.; Meesters, H.W.G.; Bathmann, U.

2014-01-01

The macrozooplankton and micronekton community of the Lazarev Sea (Southern Ocean) was investigated at 3 depth layers during austral summer, autumn and winter: (1) the surface layer (0-2 m); (2) the epipelagic layer (0-200 m); and (3) the deep layer (0-3000 m). Altogether, 132 species were

A numerical study of the South China Sea Warm Current during winter monsoon relaxation

Science.gov (United States)

Zhang, Cong; Ding, Yang; Bao, Xianwen; Bi, Congcong; Li, Ruixiang; Zhang, Cunjie; Shen, Biao; Wan, Kai

2018-03-01

Using a Finite-Volume Community Ocean Model, we investigated the dynamic mechanism of the South China Sea Warm Current (SCSWC) in the northern South China Sea (NSCS) during winter monsoon relaxation. The model reproduces the mean surface circulation of the NSCS during winter, while model-simulated subtidal currents generally capture its current pattern. The model shows that the current over the continental shelf is generally southwestward, under a strong winter monsoon condition, but a northeastward counter-wind current usually develops between 50-and 100-m isobaths, when the monsoon relaxes. Model experiments, focusing on the wind relaxation process, show that sea level is elevated in the northwestern South China Sea (SCS), related to the persistent northeasterly monsoon. Following wind relaxation, a high sea level band builds up along the mid-shelf, and a northeastward current develops, having an obvious vertical barotropic structure. Momentum balance analysis indicates that an along-shelf pressure gradient provides the initial driving force for the SCSWC during the first few days following wind relaxation. The SCSWC subsequently reaches a steady quasi-geostrophic balance in the cross-shelf direction, mainly linked to sea level adjustment over the shelf. Lagrangian particle tracking experiments show that both the southwestward coastal current and slope current contribute to the northeastward movement of the SCSWC during winter monsoon relaxation.

Seasonal variation, spatial distribution and source apportionment for polycyclic aromatic hydrocarbons (PAHs) at nineteen communities in Xi'an, China: The effects of suburban scattered emissions in winter

International Nuclear Information System (INIS)

Wang, Jingzhi; Cao, Junji; Dong, Zhibao; Guinot, Benjamin; Gao, Meiling; Huang, Rujin; Han, Yongming; Huang, Yu

2017-01-01

Seasonal variation and spatial distribution of PM 2.5 bound polycyclic aromatic hydrocarbons (PAHs) were investigated at urban residential, commercial area, university, suburban region, and industry in Xi'an, during summer and winter time at 2013. Much higher levels of total PAHs were obtained in winter. Spatial distributions by kriging interpolations principle showed that relative high PAHs were detected in western Xi'an in both summer and winter, with decreasing trends in winter from the old city wall to the 2 nd -3rd ring road except for the suburban region and industry. Coefficients of diversity and statistics by SPSS method demonstrated that PAHs in suburban have significant differences (t < 0.05) with those in urban residential in both seasons. The positive Matrix Factorization (PMF) modeling indicated that biomass burning (31.1%) and vehicle emissions (35.9%) were main sources for PAHs in winter and summer in urban, which different with the suburban. The coal combustion was the main source for PAHs in suburban region, which accounted for 46.6% in winter and sharp decreased to 19.2% in summer. Scattered emissions from uncontrolled coal combustion represent an important source of PAHs in suburban in winter and there were about 135 persons in Xi'an will suffer from lung cancer for lifetime exposure at winter levels. Further studies are needed to specify the effluence of the scattered emission in suburban to the city and to develop a strategy for controlling those emissions and lighten possible health effects. - Highlights: • PM 2.5 bound PAHs were investigated in nineteen communities of Xi'an at 2013. • High amount of uncontrolled coal combustion were happened in suburban at winter. • About 135 persons in Xi'an will suffer from lung cancer for exposure at winter. - The high contribution of coal combustion for PAHs in suburban region demonstrated the high amount of scattered emissions in winter.

Finding Community Structures In Social Activity Data

KAUST Repository

Peng, Chengbin

2015-01-01

Social activity data sets are increasing in number and volume. Finding community structure in such data is valuable in many applications. For example, understand- ing the community structure of social networks may reduce the spread of epidemics

Mycological composition in the rhizosphere of winter wheat in different crop production systems

Science.gov (United States)

Frac, Magdalena; Lipiec, Jerzy; Usowicz, Boguslaw

2010-05-01

Fungi play an important role in the soil ecosystem as decomposers of plant residues, releasing nutrients that sustain and stimulate processes of plant growth. Some fungi possess antagonistic properties towards plant pathogens. The structure of plant and soil communities is influenced by the interactions among its component species and also by anthropogenic pressure. In the study of soil fungi, particular attention is given to the rhizosphere. Knowledge of the structure and diversity of the fungal community in the rhizosphere lead to the better understanding of pathogen-antagonist interactions. The aim of this study was to evaluate the mycological composition of the winter wheat rhizosphere in two different crop production systems. The study was based on a field experiment established in 1994 year at the Experimental Station in South-East Poland. The experiment was conducted on grey-brown podzolic soil. In this experiment winter wheat were grown in two crop production systems: ecological and conventional - monoculture. The research of fungi composition was conducted in 15th year of experiment. Rhizosphere was collected two times during growing season, in different development stage: shooting phase and full ripeness phase. Martin medium and the dilutions 10-3 and 10-4 were used to calculate the total number cfu (colony forming units) of fungi occurring in the rhizosphere of winter wheat. The fungi were identified using Czapeka-Doxa medium for Penicillium, potato dextrose agar for all fungi and agar Nirenberga (SNA) for Fusarium. High number of antagonistic fungi (Penicillium sp., Trichoderma sp.) was recorded in the rhizosphere of wheat in ecological system. The presence of these fungi can testify to considerable biological activity, which contributes to the improvement of the phytosanitary condition of the soil. However, the decrease of the antagonistic microorganism number in the crop wheat in monoculture can be responsible for appearance higher number of the

SUSTAINABLE TOURISM IN NORTHWESTERN ALPS: WINTER SPORTS IMPACT ON PASTURE LANDS

OpenAIRE

FREPPAZ MICHELE; FILIPPA GIANLUCA; CAIMI ANGELO; ZANINI ERMANNO

2010-01-01

Tourism has many potential benefits for rural areas, being an important source of jobs for nonmetro communities, especially for those that are economically underdeveloped. The traditional use of lands in mountain regions is combined nowadays with surfaces devoted to recreational activities because of increasing tourist demand for winter sports. Winter-based ski tourism is a major human use of many mountain regions, with large-scale ski resorts in Europe, Asia, North and South America, New Zea...

Effects of lead structure in Bering Sea pack ice on the flight costs of wintering spectacled eiders

Science.gov (United States)

Bump, Joseph K.; Lovvorn, James R.

2004-10-01

In polar regions, sea ice is critical habitat for many marine birds and mammals. The quality of pack ice habitat depends on the duration and spacing of leads (openings in the ice), which determine access to water and air for diving endotherms, and how often and how far they must move as leads open and close. Recent warming trends have caused major changes in the extent and nature of sea ice at large scales used in climate models. However, no studies have analyzed lead structure in terms of habitat for ice-dependent endotherms, or effects of climate on ice habitat at scales relevant to their daily movements. Based on observations from an icebreaker and synthetic aperture radar (SAR) images, we developed methods to describe the dynamics and thermodynamics of lead structure relative to use by spectacled eiders ( Somateria fischeri) wintering in pack ice of the Bering Sea. By correlating lead structure with weather variables, we then used these methods to estimate changes in lead dynamics from 1945 to 2002, and effects of such changes on flight costs of the eiders. For 1991-1992, when images were available about every 3 days throughout winter, SAR images were divided among five weather regimes defined by wind speed, wind direction, and air temperature. Based on 12.5-m pixels, lead shape, compass orientation, and fetch across leads did not differ among the weather regimes. However, the five regimes differed in total area of open water, leads per unit area, and distance between leads. Lead duration was modeled based on air temperature, wind, and fetch. Estimates of mean daily flight time for eiders, based on lead duration and distance between neighboring leads, differed among regimes by 0 to 15 min. Resulting flight costs varied from 0 to 158 kJ day -1, or from 0% to 11% of estimated field metabolic rate. Over 57 winters (1945-2002), variation among years in mean daily flight time was most influenced by the north-south wind component, which determined pack divergence

The effect of tillage intensity on soil structure and winter wheat root/shoot growth

DEFF Research Database (Denmark)

Munkholm, Lars Juhl; Hansen, Elly Møller; Olesen, Jørgen E

2008-01-01

was followed during the growing seasons using spectral reflectance and mini-rhizotron measurements, respectively. A range of soil physical properties were measured. We found decreased early season shoot and root growth with decreasing tillage intensity. Differences diminished later in the growing season...... of this study was to investigate the effect of tillage intensity on crop growth dynamics and soil structure. A tillage experiment was established in autumn 2002 on two Danish sandy loams (Foulum and Flakkebjerg) in a cereal-based crop rotation. The tillage systems included in this study were direct drilling (D...... with decreasing tillage intensity for the first year winter wheat at Foulum. In general ploughing resulted in the highest grain yields. This study highlights the important interaction between soil structure and crop growth dynamics....

Winter Atomiades 2014: CERN skiers win 31 medals!

CERN Multimedia

CERN Bulletin

2014-01-01

The 12th Winter Atomiades took place at Flachau, Austria, from 8 to 15 March 2014. The event, organised by the Association of the Sports Communities of the European Research Institutes (see here), brought together 18 research centres, including CERN, AIT, ESRF, PSI and many others, with a total of about 280 participants.   Lots of fun and a great result for the 13 CERN skiers at the 2014 Winter Atomiades in Flachau, Austria. From left to right and from bottom to top: Lennart Jirden (PH), Anna Lipniacka (PH), Guillaume Michet (DGS), Vera Chetvertkova (TE), Thierry Boileau (external), Jean-Louis Grenard (EN), Clement Bovet (EN), Marc Tavlet (BE), Rob Knoops (PH), Giuseppe Lo Presti (IT), Simone Campana (IT), Sylviane Gander (external) and Javier Pablos (TE).   The team of 13 athletes from six different CERN departments won 31 medals across all disciplines, in a spirit of fun and fair play. CERN came second in the general ranking of all participating institutes! The next Winter Atomiades...

Simulation modeling to understand how selective foraging by beaver can drive the structure and function of a willow community

Science.gov (United States)

Peinetti, H.R.; Baker, B.W.; Coughenour, M.B.

2009-01-01

Beaver-willow (Castor-Salix) communities are a unique and vital component of healthy wetlands throughout the Holarctic region. Beaver selectively forage willow to provide fresh food, stored winter food, and construction material. The effects of this complex foraging behavior on the structure and function of willow communities is poorly understood. Simulation modeling may help ecologists understand these complex interactions. In this study, a modified version of the SAVANNA ecosystem model was developed to better understand how beaver foraging affects the structure and function of a willow community in a simulated riparian ecosystem in Rocky Mountain National Park, Colorado (RMNP). The model represents willow in terms of plant and stem dynamics and beaver foraging in terms of the quantity and quality of stems cut to meet the energetic and life history requirements of beaver. Given a site where all stems were equally available, the model suggested a simulated beaver family of 2 adults, 2 yearlings, and 2 kits required a minimum of 4 ha of willow (containing about10 stems m-2) to persist in a steady-state condition. Beaver created a willow community where the annual net primary productivity (ANPP) was 2 times higher and plant architecture was more diverse than the willow community without beaver. Beaver foraging created a plant architecture dominated by medium size willow plants, which likely explains how beaver can increase ANPP. Long-term simulations suggested that woody biomass stabilized at similar values even though availability differed greatly at initial condition. Simulations also suggested that willow ANPP increased across a range of beaver densities until beaver became food limited. Thus, selective foraging by beaver increased productivity, decreased biomass, and increased structural heterogeneity in a simulated willow community.

Similarity between community structures of different online social networks and its impact on underlying community detection

Science.gov (United States)

Fan, W.; Yeung, K. H.

2015-03-01

As social networking services are popular, many people may register in more than one online social network. In this paper we study a set of users who have accounts of three online social networks: namely Foursquare, Facebook and Twitter. Community structure of this set of users may be reflected in these three online social networks. Therefore, high correlation between these reflections and the underlying community structure may be observed. In this work, community structures are detected in all three online social networks. Also, we investigate the similarity level of community structures across different networks. It is found that they show strong correlation with each other. The similarity between different networks may be helpful to find a community structure close to the underlying one. To verify this, we propose a method to increase the weights of some connections in networks. With this method, new networks are generated to assist community detection. By doing this, value of modularity can be improved and the new community structure match network's natural structure better. In this paper we also show that the detected community structures of online social networks are correlated with users' locations which are identified on Foursquare. This information may also be useful for underlying community detection.

Seasonal Variation on Microbial Community and Methane Production during Anaerobic Digestion of Cattle Manure in Brazil.

Science.gov (United States)

Resende, Juliana Alves; Godon, Jean-Jacques; Bonnafous, Anaïs; Arcuri, Pedro Braga; Silva, Vânia Lúcia; Otenio, Marcelo Henrique; Diniz, Cláudio Galuppo

2016-04-01

Anaerobic digestion is an alternative method for the treatment of animal manure and wastewater. The anaerobic bioconversion of biomass requires a multi-step biological process, including microorganisms with distinct roles. The diversity and composition of microbial structure in pilot-scale anaerobic digestion operating at ambient temperature in Brazil were studied. Influence of the seasonal and temporal patterns on bacterial and archaeal communities were assessed by studying the variations in density, dynamic and diversity and structure. The average daily biogas produced in the summer and winter months was 18.7 and 16 L day(-1), respectively, and there was no difference in the average methane yield. Quantitative PCR analysis revealed that no differences in abundances and dynamics were found for bacterial communities and the total number of Archaea in different seasons. Analysis of bacterial clone libraries revealed a predominance of Firmicutes (54.5 %/summer and 46.7 %/winter) and Bacteroidetes (31.4 %/summer and 44.4 %/winter). Within the Archaea, the phylum Euryarchaeota was predominant in both digesters. Phylogenetic distribution showed changes in percentage between the phyla identified, but no alterations were recorded in the quality and amount of produced methane or community dynamics. The results may suggest that redundancy of microbial groups may have occurred, pointing to a more complex microbial community in the ecosystem related to this ambient temperature system.

Enhancing community detection by using local structural information

International Nuclear Information System (INIS)

Xiang, Ju; Bao, Mei-Hua; Tang, Liang; Li, Jian-Ming; Hu, Ke; Chen, Benyan; Hu, Jing-Bo; Zhang, Yan; Tang, Yan-Ni; Gao, Yuan-Yuan

2016-01-01

Many real-world networks, such as gene networks, protein–protein interaction networks and metabolic networks, exhibit community structures, meaning the existence of groups of densely connected vertices in the networks. Many local similarity measures in the networks are closely related to the concept of the community structures, and may have a positive effect on community detection in the networks. Here, various local similarity measures are used to extract local structural information, which is then applied to community detection in the networks by using the edge-reweighting strategy. The effect of the local similarity measures on community detection is carefully investigated and compared in various networks. The experimental results show that the local similarity measures are crucial for the improvement of community detection methods, while the positive effect of the local similarity measures is closely related to the networks under study and applied community detection methods. (paper: interdisciplinary statistical mechanics)

Evaluation of the Community Multiscale Air Quality Model for Simulating Winter Ozone Formation in the Uinta Basin

Science.gov (United States)

Matichuk, Rebecca; Tonnesen, Gail; Luecken, Deborah; Gilliam, Rob; Napelenok, Sergey L.; Baker, Kirk R.; Schwede, Donna; Murphy, Ben; Helmig, Detlev; Lyman, Seth N.; Roselle, Shawn

2017-12-01

The Weather Research and Forecasting (WRF) and Community Multiscale Air Quality (CMAQ) models were used to simulate a 10 day high-ozone episode observed during the 2013 Uinta Basin Winter Ozone Study (UBWOS). The baseline model had a large negative bias when compared to ozone (O3) and volatile organic compound (VOC) measurements across the basin. Contrary to other wintertime Uinta Basin studies, predicted nitrogen oxides (NOx) were typically low compared to measurements. Increases to oil and gas VOC emissions resulted in O3 predictions closer to observations, and nighttime O3 improved when reducing the deposition velocity for all chemical species. Vertical structures of these pollutants were similar to observations on multiple days. However, the predicted surface layer VOC mixing ratios were generally found to be underestimated during the day and overestimated at night. While temperature profiles compared well to observations, WRF was found to have a warm temperature bias and too low nighttime mixing heights. Analyses of more realistic snow heat capacity in WRF to account for the warm bias and vertical mixing resulted in improved temperature profiles, although the improved temperature profiles seldom resulted in improved O3 profiles. While additional work is needed to investigate meteorological impacts, results suggest that the uncertainty in the oil and gas emissions contributes more to the underestimation of O3. Further, model adjustments based on a single site may not be suitable across all sites within the basin.

Why on the snow? Winter emergence strategies of snow-active Chironomidae (Diptera) in Poland.

Science.gov (United States)

Soszyńska-Maj, Agnieszka; Paasivirta, Lauri; Giłka, Wojciech

2016-10-01

A long-term study of adult non-biting midges (Chironomidae) active in winter on the snow in mountain areas and lowlands in Poland yielded 35 species. The lowland and mountain communities differed significantly in their specific composition. The mountain assemblage was found to be more diverse and abundant, with a substantial contribution from the subfamily Diamesinae, whereas Orthocladiinae predominated in the lowlands. Orthocladius wetterensis Brundin was the most characteristic and superdominant species in the winter-active chironomid communities in both areas. Only a few specimens and species of snow-active chironomids were recorded in late autumn and early winter. The abundance of chironomids peaked in late February in the mountain and lowland areas with an additional peak in the mountain areas in early April. However, this second peak of activity consisted mainly of Orthocladiinae, as Diamesinae emerged earliest in the season. Most snow-active species emerged in mid- and late winter, but their seasonal patterns differed between the 2 regions as a result of the different species composition and the duration of snow cover in these regions. Spearman's rank correlation coefficient tests yielded positive results between each season and the number of chironomid individuals recorded in the mountain area. A positive correlation between air temperature, rising to +3.5 °C, and the number of specimens recorded on the snow in the mountain community was statistically significant. The winter emergence and mate-searching strategies of chironomids are discussed in the light of global warming, and a brief compilation of most important published data on the phenomena studied is provided. © 2015 Institute of Zoology, Chinese Academy of Sciences.

Disease and community structure: white-nose syndrome alters spatial and temporal niche partitioning in sympatric bat species

Science.gov (United States)

Jachowski, David S.; Dobony, Christopher A.; Coleman, Laci S.; Ford, W. Mark; Britzke, Eric R.; Rodrigue, Jane L.

2014-01-01

AimEmerging infectious diseases present a major perturbation with apparent direct effects such as reduced population density, extirpation and/or extinction. Comparatively less is known about the potential indirect effects of disease that likely alter community structure and larger ecosystem function. Since 2006, white-nose syndrome (WNS) has resulted in the loss of over 6 million hibernating bats in eastern North America. Considerable evidence exists concerning niche partitioning in sympatric bat species in this region, and the unprecedented, rapid decline in multiple species following WNS may provide an opportunity to observe a dramatic restructuring of the bat community.LocationWe conducted our study at Fort Drum Army Installation in Jefferson and Lewis counties, New York, USA, where WNS first impacted extant bat species in winter 2007–2008.MethodsAcoustical monitoring during 2003–2011 allowed us to test the hypothesis that spatial and temporal niche partitioning by bats was relaxed post-WNS.ResultsWe detected nine bat species pre- and post-WNS. Activity for most bat species declined post-WNS. Dramatic post-WNS declines in activity of little brown bat (Myotis lucifugus, MYLU), formerly the most abundant bat species in the region, were associated with complex, often species-specific responses by other species that generally favoured increased spatial and temporal overlap with MYLU.Main conclusionsIn addition to the obvious direct effects of disease on bat populations and activity levels, our results provide evidence that disease can have cascading indirect effects on community structure. Recent occurrence of WNS in North America, combined with multiple existing stressors, is resulting in dramatic shifts in temporal and spatial niche partitioning within bat communities. These changes might influence long-term population viability of some bat species as well as broader scale ecosystem structure and function.

Winter climate limits subantarctic low forest growth and establishment.

Science.gov (United States)

Harsch, Melanie A; McGlone, Matt S; Wilmshurst, Janet M

2014-01-01

Campbell Island, an isolated island 600 km south of New Zealand mainland (52 °S, 169 °E) is oceanic (Conrad Index of Continentality  =  -5) with small differences between mean summer and winter temperatures. Previous work established the unexpected result that a mean annual climate warming of c. 0.6 °C since the 1940's has not led to upward movement of the forest limit. Here we explore the relative importance of summer and winter climatic conditions on growth and age-class structure of the treeline forming species, Dracophyllum longifolium and Dracophyllum scoparium over the second half of the 20th century. The relationship between climate and growth and establishment were evaluated using standard dendroecological methods and local climate data from a meteorological station on the island. Growth and establishment were correlated against climate variables and further evaluated within hierarchical regression models to take into account the effect of plot level variables. Winter climatic conditions exerted a greater effect on growth and establishment than summer climatic conditions. Establishment is maximized under warm (mean winter temperatures >7 °C), dry winters (total winter precipitation <400 mm). Growth, on the other hand, is adversely affected by wide winter temperature ranges and increased rainfall. The contrasting effect of winter warmth on growth and establishment suggests that winter temperature affects growth and establishment through differing mechanisms. We propose that milder winters enhance survival of seedlings and, therefore, recruitment, but increases metabolic stress on established plants, resulting in lower growth rates. Future winter warming may therefore have complex effects on plant growth and establishment globally.

Emergence of structured communities through evolutionary dynamics.

Science.gov (United States)

Shtilerman, Elad; Kessler, David A; Shnerb, Nadav M

2015-10-21

Species-rich communities, in which many competing species coexist in a single trophic level, are quite frequent in nature, but pose a formidable theoretical challenge. In particular, it is known that complex competitive systems become unstable and unfeasible when the number of species is large. Recently, many studies have attributed the stability of natural communities to the structure of the interspecific interaction network, yet the nature of such structures and the underlying mechanisms responsible for them remain open questions. Here we introduce an evolutionary model, based on the generic Lotka-Volterra competitive framework, from which a stable, structured, diverse community emerges spontaneously. The modular structure of the competition matrix reflects the phylogeny of the community, in agreement with the hierarchial taxonomic classification. Closely related species tend to have stronger niche overlap and weaker fitness differences, as opposed to pairs of species from different modules. The competitive-relatedness hypothesis and the idea of emergent neutrality are discussed in the context of this evolutionary model. Copyright © 2015 Elsevier Ltd. All rights reserved.

Winter Arctic sea ice growth: current variability and projections for the coming decades

Science.gov (United States)

Petty, A.; Boisvert, L.; Webster, M.; Holland, M. M.; Bailey, D. A.; Kurtz, N. T.; Markus, T.

2017-12-01

Arctic sea ice increases in both extent and thickness during the cold winter months ( October to May). Winter sea ice growth is an important factor controlling ocean ventilation and winter water/deep water formation, as well as determining the state and vulnerability of the sea ice pack before the melt season begins. Key questions for the Arctic community thus include: (i) what is the current magnitude and variability of winter Arctic sea ice growth and (ii) how might this change in a warming Arctic climate? To address (i), our current best guess of pan-Arctic sea ice thickness, and thus volume, comes from satellite altimetry observations, e.g. from ESA's CryoSat-2 satellite. A significant source of uncertainty in these data come from poor knowledge of the overlying snow depth. Here we present new estimates of winter sea ice thickness from CryoSat-2 using snow depths from a simple snow model forced by reanalyses and satellite-derived ice drift estimates, combined with snow depth estimates from NASA's Operation IceBridge. To address (ii), we use data from the Community Earth System Model's Large Ensemble Project, to explore sea ice volume and growth variability, and how this variability might change over the coming decades. We compare and contrast the model simulations to observations and the PIOMAS ice-ocean model (over recent years/decades). The combination of model and observational analysis provide novel insight into Arctic sea ice volume variability.

Phase synchronization on small-world networks with community structure

International Nuclear Information System (INIS)

Xiao-Hua, Wang; Li-Cheng, Jiao; Jian-She, Wu

2010-01-01

In this paper, we propose a simple model that can generate small-world network with community structure. The network is introduced as a tunable community organization with parameter r, which is directly measured by the ratio of inter- to intra-community connectivity, and a smaller r corresponds to a stronger community structure. The structure properties, including the degree distribution, clustering, the communication efficiency and modularity are also analysed for the network. In addition, by using the Kuramoto model, we investigated the phase synchronization on this network, and found that increasing the fuzziness of community structure will markedly enhance the network synchronizability; however, in an abnormal region (r ≤ 0.001), the network has even worse synchronizability than the case of isolated communities (r = 0). Furthermore, this network exhibits a remarkable synchronization behaviour in topological scales: the oscillators of high densely interconnected communities synchronize more easily, and more rapidly than the whole network. (general)

Seasonal induced changes in spinach rhizosphere microbial community structure with varying salinity and drought.

Science.gov (United States)

Mark Ibekwe, A; Ors, Selda; Ferreira, Jorge F S; Liu, Xuan; Suarez, Donald L

2017-02-01

Salinity is a common problem under irrigated agriculture, especially in low rainfall and high evaporative demand areas of southwestern United States and other semi-arid regions around the world. However, studies on salinity effects on soil microbial communities are relatively few while the effects of irrigation-induced salinity on soil chemical and physical properties and plant growth are well documented. In this study, we examined the effects of salinity, temperature, and temporal variability on soil and rhizosphere microbial communities in sand tanks irrigated with prepared solutions designed to simulate saline wastewater. Three sets of experiments with spinach (Spinacia oleracea L., cv. Racoon) were conducted under saline water during different time periods (early winter, late spring, and early summer). Bacterial 16S V4 rDNA region was amplified utilizing fusion primers designed against the surrounding conserved regions using MiSeq® Illumina sequencing platform. Across the two sample types, bacteria were relatively dominant among three phyla-the Proteobacteria, Cyanobacteria, and Bacteroidetes-accounted for 77.1% of taxa detected in the rhizosphere, while Proteobacteria, Bacteroidetes, and Actinobacteria accounted for 55.1% of taxa detected in soil. The results were analyzed using UniFrac coupled with principal coordinate analysis (PCoA) to compare diversity, abundance, community structure, and specific bacterial groups in soil and rhizosphere samples. Permutational analysis of variance (PERMANOVA) analysis showed that soil temperature (P=0.001), rhizosphere temperature (P=0.001), rhizosphere salinity (P=0.032), and evapotranspiration (P=0.002) significantly affected beta diversity of soil and rhizosphere microbial communities. Furthermore, salinity had marginal effects (P=0.078) on soil beta diversity. However, temporal variability differentially affected rhizosphere microbial communities irrigated with saline wastewater. Therefore, microbial communities in

Habitat preferences and conservation threats to Black-necked Cranes wintering in Bhutan.

Science.gov (United States)

Namgay, Rinchen; Wangchuk, Sangay

2016-01-01

Black-necked Crane (Grus nigricollis) is a vulnerable Red list species whose populations are declining. However, little is known about Black-necked Cranes' habitat requirements or the causes of their population decline. We identified Black-necked Cranes' winter roost and foraging preferences of Black-necked Cranes in Bhutan during the winter of 2013-2014. Black-necked Cranes' roosts were recorded using Garmin GPSmap 60CSx, while foraging preferences and threats to the birds were identified based on a survey of household heads (n = 107) residing within a 3 km radius of roost sites. We grouped the threats identified by the communities into four major categories, viz. biological, social, political and natural threats based on the relevance. Of the four major threats, communities residing within the roosting and foraging habitat of the Black-necked Crane reported biological threat as major. Biological threats as reported by communities include loss of habitat, food shortage and competition from other animals. We recommend the present roosting areas be designated as part of the conservation areas for Black-necked Crane wintering in Bumthang district. In addition to preserving these areas, government should also encourage farming in foraging habitats of Black-necked Crane, because they mainly feed on barley, wheat, paddy, potatoes and buckwheat, besides roots, tubers and insects in the wetlands.

Winters fuels report

International Nuclear Information System (INIS)

1995-01-01

The outlook for distillate fuel oil this winter is for increased demand and a return to normal inventory patterns, assuming a resumption of normal, cooler weather than last winter. With industrial production expected to grow slightly from last winter's pace, overall consumption is projected to increase 3 percent from last winter, to 3.4 million barrels per day during the heating season (October 1, 1995-March 31, 1996). Much of the supply win come from stock drawdowns and refinery production. Estimates for the winter are from the Energy Information Administration's (EIA) 4th Quarter 1995 Short-Tenn Energy Outlook (STEO) Mid-World Oil Price Case forecast. Inventories in place on September 30, 1995, of 132 million barrels were 9 percent below the unusually high year-earlier level. Inventories of high-sulfur distillate fuel oil, the principal type used for heating, were 13 percent lower than a year earlier. Supply problems are not anticipated because refinery production and the ready availability of imports should be adequate to meet demand. Residential heating off prices are expected to be somewhat higher than last winter's, as the effects of lower crude oil prices are offset by lower distillate inventories. Heating oil is forecast to average $0.92 per gallon, the highest price since the winter of 1992-93. Diesel fuel (including tax) is predicted to be slightly higher than last year at $1.13 per gallon. This article focuses on the winter assessment for distillate fuel oil, how well last year's STEO winter outlook compared to actual events, and expectations for the coming winter. Additional analyses include regional low-sulfur and high-sulfur distillate supply, demand, and prices, and recent trends in distillate fuel oil inventories

Land use diversification and intensification on elk winter range in Greater Yellowstone: A framework and agenda for social-ecological research

Science.gov (United States)

Haggerty, Julia Hobson; Epstein, Kathleen; Stone, Michael; Cross, Paul

2018-01-01

Amenity migration describes the movement of peoples to rural landscapes and the transition toward tourism and recreation and away from production-oriented land uses (ranching, timber harvesting). The resulting mosaic of land uses and community structures has important consequences for wildlife and their management. This research note examines amenity-driven changes to social-ecological systems in the Greater Yellowstone Ecosystem, specifically in lower elevations that serve as winter habitat for elk. We present a research agenda informed by a preliminary and exploratory mixed-methods investigation: the creation of a “social-impact” index of land use change on elk winter range and a focus group with wildlife management experts. Our findings suggest that elk are encountering an increasingly diverse landscape with respect to land use, while new ownership patterns increase the complexity of social and community dynamics. These factors, in turn, contribute to increasing difficulty meeting wildlife management objectives. To deal with rising complexity across social and ecological landscapes of the Greater Yellowstone Ecosystem, future research will focus on property life cycle dynamics, as well as systems approaches.

Winter climate limits subantarctic low forest growth and establishment.

Directory of Open Access Journals (Sweden)

Melanie A Harsch

Full Text Available Campbell Island, an isolated island 600 km south of New Zealand mainland (52 °S, 169 °E is oceanic (Conrad Index of Continentality  =  -5 with small differences between mean summer and winter temperatures. Previous work established the unexpected result that a mean annual climate warming of c. 0.6 °C since the 1940's has not led to upward movement of the forest limit. Here we explore the relative importance of summer and winter climatic conditions on growth and age-class structure of the treeline forming species, Dracophyllum longifolium and Dracophyllum scoparium over the second half of the 20th century. The relationship between climate and growth and establishment were evaluated using standard dendroecological methods and local climate data from a meteorological station on the island. Growth and establishment were correlated against climate variables and further evaluated within hierarchical regression models to take into account the effect of plot level variables. Winter climatic conditions exerted a greater effect on growth and establishment than summer climatic conditions. Establishment is maximized under warm (mean winter temperatures >7 °C, dry winters (total winter precipitation <400 mm. Growth, on the other hand, is adversely affected by wide winter temperature ranges and increased rainfall. The contrasting effect of winter warmth on growth and establishment suggests that winter temperature affects growth and establishment through differing mechanisms. We propose that milder winters enhance survival of seedlings and, therefore, recruitment, but increases metabolic stress on established plants, resulting in lower growth rates. Future winter warming may therefore have complex effects on plant growth and establishment globally.

Winter Climate Limits Subantarctic Low Forest Growth and Establishment

Science.gov (United States)

Harsch, Melanie A.; McGlone, Matt S.; Wilmshurst, Janet M.

2014-01-01

Campbell Island, an isolated island 600 km south of New Zealand mainland (52°S, 169°E) is oceanic (Conrad Index of Continentality  = −5) with small differences between mean summer and winter temperatures. Previous work established the unexpected result that a mean annual climate warming of c. 0.6°C since the 1940's has not led to upward movement of the forest limit. Here we explore the relative importance of summer and winter climatic conditions on growth and age-class structure of the treeline forming species, Dracophyllum longifolium and Dracophyllum scoparium over the second half of the 20th century. The relationship between climate and growth and establishment were evaluated using standard dendroecological methods and local climate data from a meteorological station on the island. Growth and establishment were correlated against climate variables and further evaluated within hierarchical regression models to take into account the effect of plot level variables. Winter climatic conditions exerted a greater effect on growth and establishment than summer climatic conditions. Establishment is maximized under warm (mean winter temperatures >7 °C), dry winters (total winter precipitation <400 mm). Growth, on the other hand, is adversely affected by wide winter temperature ranges and increased rainfall. The contrasting effect of winter warmth on growth and establishment suggests that winter temperature affects growth and establishment through differing mechanisms. We propose that milder winters enhance survival of seedlings and, therefore, recruitment, but increases metabolic stress on established plants, resulting in lower growth rates. Future winter warming may therefore have complex effects on plant growth and establishment globally. PMID:24691026

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic

Science.gov (United States)

Gustine, David D.; Brinkman, Todd J.; Lindgren, Michael A.; Schmidt, Jennifer I.; Rupp, T. Scott; Adams, Layne G.

2014-01-01

Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus) are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs), and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old) across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (−21%) than the Central Arctic herd that wintered primarily in the arctic tundra (−11%). Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic.

Directory of Open Access Journals (Sweden)

David D Gustine

Full Text Available Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs, and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (-21% than the Central Arctic herd that wintered primarily in the arctic tundra (-11%. Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Climate-driven effects of fire on winter habitat for caribou in the Alaskan-Yukon Arctic.

Science.gov (United States)

Gustine, David D; Brinkman, Todd J; Lindgren, Michael A; Schmidt, Jennifer I; Rupp, T Scott; Adams, Layne G

2014-01-01

Climatic warming has direct implications for fire-dominated disturbance patterns in northern ecosystems. A transforming wildfire regime is altering plant composition and successional patterns, thus affecting the distribution and potentially the abundance of large herbivores. Caribou (Rangifer tarandus) are an important subsistence resource for communities throughout the north and a species that depends on terrestrial lichen in late-successional forests and tundra systems. Projected increases in area burned and reductions in stand ages may reduce lichen availability within caribou winter ranges. Sufficient reductions in lichen abundance could alter the capacity of these areas to support caribou populations. To assess the potential role of a changing fire regime on winter habitat for caribou, we used a simulation modeling platform, two global circulation models (GCMs), and a moderate emissions scenario to project annual fire characteristics and the resulting abundance of lichen-producing vegetation types (i.e., spruce forests and tundra >60 years old) across a modeling domain that encompassed the winter ranges of the Central Arctic and Porcupine caribou herds in the Alaskan-Yukon Arctic. Fires were less numerous and smaller in tundra compared to spruce habitats throughout the 90-year projection for both GCMs. Given the more likely climate trajectory, we projected that the Porcupine caribou herd, which winters primarily in the boreal forest, could be expected to experience a greater reduction in lichen-producing winter habitats (-21%) than the Central Arctic herd that wintered primarily in the arctic tundra (-11%). Our results suggest that caribou herds wintering in boreal forest will undergo fire-driven reductions in lichen-producing habitats that will, at a minimum, alter their distribution. Range shifts of caribou resulting from fire-driven changes to winter habitat may diminish access to caribou for rural communities that reside in fire-prone areas.

Risk management model of winter navigation operations

International Nuclear Information System (INIS)

Valdez Banda, Osiris A.; Goerlandt, Floris; Kuzmin, Vladimir; Kujala, Pentti; Montewka, Jakub

2016-01-01

The wintertime maritime traffic operations in the Gulf of Finland are managed through the Finnish–Swedish Winter Navigation System. This establishes the requirements and limitations for the vessels navigating when ice covers this area. During winter navigation in the Gulf of Finland, the largest risk stems from accidental ship collisions which may also trigger oil spills. In this article, a model for managing the risk of winter navigation operations is presented. The model analyses the probability of oil spills derived from collisions involving oil tanker vessels and other vessel types. The model structure is based on the steps provided in the Formal Safety Assessment (FSA) by the International Maritime Organization (IMO) and adapted into a Bayesian Network model. The results indicate that ship independent navigation and convoys are the operations with higher probability of oil spills. Minor spills are most probable, while major oil spills found very unlikely but possible. - Highlights: •A model to assess and manage the risk of winter navigation operations is proposed. •The risks of oil spills in winter navigation in the Gulf of Finland are analysed. •The model assesses and prioritizes actions to control the risk of the operations. •The model suggests navigational training as the most efficient risk control option.

Winter to winter recurrence of atmospheric circulation anomalies over East Asia and its impact on winter surface air temperature anomalies.

Science.gov (United States)

Zhao, Xia; Yang, Guang

2017-01-01

The persistence of atmospheric circulation anomalies over East Asia shows a winter to winter recurrence (WTWR) phenomenon. Seasonal variations in sea level pressure anomalies and surface wind anomalies display significantly different characteristics between WTWR and non-WTWR years. The WTWR years are characterized by the recurrence of both a strong (weak) anomalous Siberian High and an East Asian winter monsoon over two successive winters without persistence through the intervening summer. However, anomalies during the non-WTWR years have the opposite sign between the current and ensuing winters. The WTWR of circulation anomalies contributes to that of surface air temperature anomalies (SATAs), which is useful information for improving seasonal and interannual climate predictions over East Asia and China. In the positive (negative) WTWR years, SATAs are cooler (warmer) over East Asia in two successive winters, but the signs of the SATAs are opposite in the preceding and subsequent winters during the non-WTWR years.

What do we know about winter active ground beetles (Coleoptera, Carabidae) in Central and Northern Europe?

Science.gov (United States)

Jaskuła, Radomir; Soszyńska-Maj, Agnieszka

2011-01-01

This paper summarizes the current knowledge on winter active Carabidae in Central and Northern Europe. In total 73 winter active species are listed, based on literature and own observations. Ground beetles are among the three most numerous Coleoptera families active during the autumn to spring period. The winter community of Carabidae is composed both of larvae (mainly autumn breeding species) and adults, as well as of epigeic species and those inhabiting tree trunks. Supranivean fauna is characterized by lower species diversity than the subnivean fauna. The activity of ground beetles decreases in late autumn, is lowest during mid-winter and increases in early spring. Carabidae are noted as an important food source in the diet of insectivorous mammals. They are also predators, hunting small winter active invertebrates.

Community structure informs species geographic distributions

KAUST Repository

Montesinos-Navarro, Alicia

2018-05-23

Understanding what determines species\\' geographic distributions is crucial for assessing global change threats to biodiversity. Measuring limits on distributions is usually, and necessarily, done with data at large geographic extents and coarse spatial resolution. However, survival of individuals is determined by processes that happen at small spatial scales. The relative abundance of coexisting species (i.e. \\'community structure\\') reflects assembly processes occurring at small scales, and are often available for relatively extensive areas, so could be useful for explaining species distributions. We demonstrate that Bayesian Network Inference (BNI) can overcome several challenges to including community structure into studies of species distributions, despite having been little used to date. We hypothesized that the relative abundance of coexisting species can improve predictions of species distributions. In 1570 assemblages of 68 Mediterranean woody plant species we used BNI to incorporate community structure into Species Distribution Models (SDMs), alongside environmental information. Information on species associations improved SDM predictions of community structure and species distributions moderately, though for some habitat specialists the deviance explained increased by up to 15%. We demonstrate that most species associations (95%) were positive and occurred between species with ecologically similar traits. This suggests that SDM improvement could be because species co-occurrences are a proxy for local ecological processes. Our study shows that Bayesian Networks, when interpreted carefully, can be used to include local conditions into measurements of species\\' large-scale distributions, and this information can improve the predictions of species distributions.

On the structure of the inshore fish community of England and Wales

International Nuclear Information System (INIS)

Henderson, P.A.

1988-12-01

Records of fish captures on power station intake screens were used to analyse the structure of the English and Welsh inshore fish community. The study was undertaken as part of a programme to predict fish captures at future power station sites. It was found that 118 of the 122 fish species known to live inshore were recorded from the screens of only 12 coastal power stations. The minimum number of species at one site was about 80, found at fully marine localities along the English Channel coast. This number declined with increasing latitude and decreasing salinity. On average, 28 species were present simultaneously and these would include four pelagic, eight demersal and 16 benthic species. There was found to be 31 dominant species which comprised greater than 96% of the total catch by weight or number at all of the sites. These can be considered as the key species through which most of the energy and nutrients in the ecosystem must travel. The major factors determining the abundance of these species were salinity, degree of shelter, summer temperatures and winter temperatures. (author)

Ecological and evolutionary effects of stickleback on community structure.

Directory of Open Access Journals (Sweden)

Simone Des Roches

Full Text Available Species' ecology and evolution can have strong effects on communities. Both may change concurrently when species colonize a new ecosystem. We know little, however, about the combined effects of ecological and evolutionary change on community structure. We simultaneously examined the effects of top-predator ecology and evolution on freshwater community parameters using recently evolved generalist and specialist ecotypes of three-spine stickleback (Gasterosteus aculeatus. We used a mesocosm experiment to directly examine the effects of ecological (fish presence and density and evolutionary (phenotypic diversity and specialization factors on community structure at lower trophic levels. We evaluated zooplankton biomass and composition, periphyton and phytoplankton chlorophyll-a concentration, and net primary production among treatments containing different densities and diversities of stickleback. Our results showed that both ecological and evolutionary differences in the top-predator affect different aspects of community structure and composition. Community structure, specifically the abundance of organisms at each trophic level, was affected by stickleback presence and density, whereas composition of zooplankton was influenced by stickleback diversity and specialization. Primary productivity, in terms of chlorophyll-a concentration and net primary production was affected by ecological but not evolutionary factors. Our results stress the importance of concurrently evaluating both changes in density and phenotypic diversity on the structure and composition of communities.

The responses of microbial temperature relationships to seasonal change and winter warming in a temperate grassland.

Science.gov (United States)

Birgander, Johanna; Olsson, Pål Axel; Rousk, Johannes

2018-01-18

Microorganisms dominate the decomposition of organic matter and their activities are strongly influenced by temperature. As the carbon (C) flux from soil to the atmosphere due to microbial activity is substantial, understanding temperature relationships of microbial processes is critical. It has been shown that microbial temperature relationships in soil correlate with the climate, and microorganisms in field experiments become more warm-tolerant in response to chronic warming. It is also known that microbial temperature relationships reflect the seasons in aquatic ecosystems, but to date this has not been investigated in soil. Although climate change predictions suggest that temperatures will be mostly affected during winter in temperate ecosystems, no assessments exist of the responses of microbial temperature relationships to winter warming. We investigated the responses of the temperature relationships of bacterial growth, fungal growth, and respiration in a temperate grassland to seasonal change, and to 2 years' winter warming. The warming treatments increased winter soil temperatures by 5-6°C, corresponding to 3°C warming of the mean annual temperature. Microbial temperature relationships and temperature sensitivities (Q 10 ) could be accurately established, but did not respond to winter warming or to seasonal temperature change, despite significant shifts in the microbial community structure. The lack of response to winter warming that we demonstrate, and the strong response to chronic warming treatments previously shown, together suggest that it is the peak annual soil temperature that influences the microbial temperature relationships, and that temperatures during colder seasons will have little impact. Thus, mean annual temperatures are poor predictors for microbial temperature relationships. Instead, the intensity of summer heat-spells in temperate systems is likely to shape the microbial temperature relationships that govern the soil-atmosphere C

The community structure of over-wintering larval and small juvenile fish in a large estuary

DEFF Research Database (Denmark)

Munk, Peter; Cardinale, Massimiliano; Casini, Michele

2014-01-01

and abundances are described, and linkages between ichthyoplankton abundances and corresponding hydrographical information are analysed by GAM methods. Communities were dominated by herring, gobies, butterfish, sprat, pipefishes, lemon sole and European eel (i.e. glass eel), and all the sampled species showed...

Climate extremes drive changes in functional community structure.

Science.gov (United States)

Boucek, Ross E; Rehage, Jennifer S

2014-06-01

The response of communities to climate extremes can be quite variable. Much of this variation has been attributed to differences in community-specific functional trait diversity, as well as community composition. Yet, few if any studies have explicitly tested the response of the functional trait structure of communities following climate extremes (CEs). Recently in South Florida, two independent, but sequential potential CEs took place, a 2010 cold front, followed by a 2011 drought, both of which had profound impacts on a subtropical estuarine fish community. These CEs provided an opportunity to test whether the structure of South Florida fish communities following each extreme was a result of species-specific differences in functional traits. From historical temperature (1927-2012) and freshwater inflows records into the estuary (1955-2012), we determined that the cold front was a statistically extreme disturbance, while the drought was not, but rather a decadal rare disturbance. The two disturbances predictably affected different parts of functional community structure and thus different component species. The cold front virtually eliminated tropical species, including large-bodied snook, mojarra species, nonnative cichlids, and striped mullet, while having little affect on temperate fishes. Likewise, the drought severely impacted freshwater fishes including Florida gar, bowfin, and two centrarchids, with little effect on euryhaline species. Our findings illustrate the ability of this approach to predict and detect both the filtering effects of different types of disturbances and the implications of the resulting changes in community structure. Further, we highlight the value of this approach to developing predictive frameworks for better understanding community responses to global change. © 2014 John Wiley & Sons Ltd.

Implications of climate change on winter road networks in Ontario's Far North and northern Manitoba, Canada, based on climate model projections

Science.gov (United States)

Hori, Y.; Cheng, V. Y. S.; Gough, W. A.

2017-12-01

A network of winter roads in northern Canada connects a number of remote First Nations communities to all-season roads and rails. The extent of the winter road networks depends on the geographic features, socio-economic activities, and the numbers of remote First Nations so that it differs among the provinces. The most extensive winter road networks below the 60th parallel south are located in Ontario and Manitoba, serving 32 and 18 communities respectively. In recent years, a warmer climate has resulted in a shorter winter road season and an increase in unreliable road conditions; thus, limiting access among remote communities. This study focused on examining the future freezing degree-days (FDDs) accumulations during the winter road season at selected locations throughout Ontario's Far North and northern Manitoba using recent climate model projections from the multi-model ensembles of General Circulation Models (GCMs) under the Representative Concentration Pathway (RCP) scenarios. First, the non-parametric Mann-Kendall correlation test and the Theil-Sen method were used to identify any statistically significant trends between FDDs and time for the base period (1981-2010). Second, future climate scenarios are developed for the study areas using statistical downscaling methods. This study also examined the lowest threshold of FDDs during the winter road construction in a future period. Our previous study established the lowest threshold of 380 FDDs, which derived from the relationship between the FDDs and the opening dates of James Bay Winter Road near the Hudson-James Bay coast. Thus, this study applied the threshold measure as a conservative estimate of the minimum threshold of FDDs to examine the effects of climate change on the winter road construction period.

What do we know about winter active ground beetles (Coleoptera, Carabidae in Central and Northern Europe?

Directory of Open Access Journals (Sweden)

Radomir Jaskula

2011-05-01

Full Text Available This paper summarizes the current knowledge on winter active Carabidae in Central and Northern Europe. In total 73 winter active species are listed, based on literature and own observations. Ground beetles are among the three most numerous Coleoptera families active during the autumn to spring period. The winter community of Carabidae is composed both of larvae (mainly autumn breeding species and adults, as well as of epigeic species and those inhabiting tree trunks. Supranivean fauna is characterized by lower species diversity than the subnivean fauna. The activity of ground beetles decreases in late autumn, is lowest during mid-winter and increases in early spring. Carabidae are noted as an important food source in the diet of insectivorous mammals. They are also predators, hunting small winter active invertebrates.

Winter is losing its cool

Science.gov (United States)

Feng, S.

2017-12-01

Winter seasons have significant societal impacts across all sectors ranging from direct human health to ecosystems, transportation, and recreation. This study quantifies the severity of winter and its spatial-temporal variations using a newly developed winter severity index and daily temperature, snowfall and snow depth. The winter severity and the number of extreme winter days are decreasing across the global terrestrial areas during 1901-2015 except the southeast United States and isolated regions in the Southern Hemisphere. These changes are dominated by winter warming, while the changes in daily snowfall and snow depth played a secondary role. The simulations of multiple CMIP5 climate models can well capture the spatial and temporal variations of the observed changes in winter severity and extremes during 1951-2005. The models are consistent in projecting a future milder winter under various scenarios. The winter severity is projected to decrease 60-80% in the middle-latitude Northern Hemisphere under the business-as-usual scenario. The winter arrives later, ends earlier and the length of winter season will be notably shorter. The changes in harsh winter in the polar regions are weak, mainly because the warming leads to more snowfall in the high latitudes.

Seasonal sediment dynamics shape temperate bedrock reef communities

Science.gov (United States)

Figurski, Jared D.; Freiwald, Jan; Lonhart, Steve I.; Storlazzi, Curt

2016-01-01

Mobilized seafloor sediment can impact benthic reef communities through burial, scour, and turbidity. These processes are ubiquitous in coastal oceans and, through their influence on the survival, fitness, and interactions of species, can alter the structure and function of benthic communities. In northern Monterey Bay, California, USA, as much as 30% of the seafloor is buried or exposed seasonally, making this an ideal location to test how subtidal temperate rocky reef communities vary in the presence and absence of chronic sediment-based disturbances. Designated dynamic plots were naturally inundated by sediment in summer (50 to 100% cover) and swept clean in winter, whereas designated stable plots remained free of sediment during our study. Multivariate analyses indicated significant differences in the structure of sessile and mobile communities between dynamic and stable reef habitats. For sessile species, community structure in disturbed plots was less variable in space and time than in stable plots due to the maintenance of an early successional state. In contrast, community structure of mobile species varied more in disturbed plots than in stable plots, reflecting how mobile species distribute in response to sediment dynamics. Some species were found only in these disturbed areas, suggesting that the spatial mosaic of disturbance could increase regional diversity. We discuss how the relative ability of species to tolerate disturbance at different life history stages and their ability to colonize habitat translate into community-level differences among habitats, and how this response varies between mobile and sessile communities.

Information transfer in community structured multiplex networks

Science.gov (United States)

Solé Ribalta, Albert; Granell, Clara; Gómez, Sergio; Arenas, Alex

2015-08-01

The study of complex networks that account for different types of interactions has become a subject of interest in the last few years, specially because its representational power in the description of users interactions in diverse online social platforms (Facebook, Twitter, Instagram, etc.). The mathematical description of these interacting networks has been coined under the name of multilayer networks, where each layer accounts for a type of interaction. It has been shown that diffusive processes on top of these networks present a phenomenology that cannot be explained by the naive superposition of single layer diffusive phenomena but require the whole structure of interconnected layers. Nevertheless, the description of diffusive phenomena on multilayer networks has obviated the fact that social networks have strong mesoscopic structure represented by different communities of individuals driven by common interests, or any other social aspect. In this work, we study the transfer of information in multilayer networks with community structure. The final goal is to understand and quantify, if the existence of well-defined community structure at the level of individual layers, together with the multilayer structure of the whole network, enhances or deteriorates the diffusion of packets of information.

Information transfer in community structured multiplex networks

Directory of Open Access Journals (Sweden)

Albert eSolé Ribalta

2015-08-01

Full Text Available The study of complex networks that account for different types of interactions has become a subject of interest in the last few years, specially because its representational power in the description of users interactions in diverse online social platforms (Facebook, Twitter, Instagram, etc.. The mathematical description of these interacting networks has been coined under the name of multilayer networks, where each layer accounts for a type of interaction. It has been shown that diffusive processes on top of these networks present a phenomenology that cannot be explained by the naive superposition of single layer diffusive phenomena but require the whole structure of interconnected layers. Nevertheless, the description of diffusive phenomena on multilayer networks has obviated the fact that social networks have strong mesoscopic structure represented by different communities of individuals driven by common interests, or any other social aspect. In this work, we study the transfer of information in multilayer networks with community structure. The final goal is to understand and quantify, if the existence of well-defined community structure at the level of individual layers, together with the multilayer structure of the whole network, enhances or deteriorates the diffusion of packets of information.

Survival of rapidly fluctuating natural low winter temperatures by High Arctic soil invertebrates

DEFF Research Database (Denmark)

Convey, Peter; Abbandonato, Holly; Bergan, Frode

2015-01-01

The extreme polar environment creates challenges for its resident invertebrate communities and the stress tolerance of some of these animals has been examined over many years. However, although it is well appreciated that standard air temperature records often fail to describe accurately conditions...... microhabitats. To assess survival of natural High Arctic soil invertebrate communities contained in soil and vegetation cores to natural winter temperature variations, the overwintering temperatures they experienced were manipulated by deploying cores in locations with varying snow accumulation: No Snow...... and did not decrease below -12. °C. Those under deep snow were even more stable and did not decline below -2. °C. Despite these striking differences in winter thermal regimes, there were no clear differences in survival of the invertebrate fauna between treatments, including oribatid, prostigmatid...

Evidence for the functional significance of diazotroph community structure in soil.

Science.gov (United States)

Hsu, Shi-Fang; Buckley, Daniel H

2009-01-01

Microbial ecologists continue to seek a greater understanding of the factors that govern the ecological significance of microbial community structure. Changes in community structure have been shown to have functional significance for processes that are mediated by a narrow spectrum of organisms, such as nitrification and denitrification, but in some cases, functional redundancy in the community seems to buffer microbial ecosystem processes. The functional significance of microbial community structure is frequently obscured by environmental variation and is hard to detect in short-term experiments. We examine the functional significance of free-living diazotrophs in a replicated long-term tillage experiment in which extraneous variation is minimized and N-fixation rates can be related to soil characteristics and diazotroph community structure. Soil characteristics were found to be primarily impacted by tillage management, whereas N-fixation rates and diazotroph community structure were impacted by both biomass management practices and interactions between tillage and biomass management. The data suggest that the variation in diazotroph community structure has a greater impact on N-fixation rates than do soil characteristics at the site. N-fixation rates displayed a saturating response to increases in diazotroph community diversity. These results show that the changes in the community structure of free-living diazotrophs in soils can have ecological significance and suggest that this response is related to a change in community diversity.

Winter Bird Assemblages in Rural and Urban Environments: A National Survey.

Science.gov (United States)

Tryjanowski, Piotr; Sparks, Tim H; Biaduń, Waldemar; Brauze, Tomasz; Hetmański, Tomasz; Martyka, Rafał; Skórka, Piotr; Indykiewicz, Piotr; Myczko, Łukasz; Kunysz, Przemysław; Kawa, Piotr; Czyż, Stanisław; Czechowski, Paweł; Polakowski, Michał; Zduniak, Piotr; Jerzak, Leszek; Janiszewski, Tomasz; Goławski, Artur; Duduś, Leszek; Nowakowski, Jacek J; Wuczyński, Andrzej; Wysocki, Dariusz

2015-01-01

Urban development has a marked effect on the ecological and behavioural traits of many living organisms, including birds. In this paper, we analysed differences in the numbers of wintering birds between rural and urban areas in Poland. We also analysed species richness and abundance in relation to longitude, latitude, human population size, and landscape structure. All these parameters were analysed using modern statistical techniques incorporating species detectability. We counted birds in 156 squares (0.25 km2 each) in December 2012 and again in January 2013 in locations in and around 26 urban areas across Poland (in each urban area we surveyed 3 squares and 3 squares in nearby rural areas). The influence of twelve potential environmental variables on species abundance and richness was assessed with Generalized Linear Mixed Models, Principal Components and Detrended Correspondence Analyses. Totals of 72 bird species and 89,710 individual birds were recorded in this study. On average (± SE) 13.3 ± 0.3 species and 288 ± 14 individuals were recorded in each square in each survey. A formal comparison of rural and urban areas revealed that 27 species had a significant preference; 17 to rural areas and 10 to urban areas. Moreover, overall abundance in urban areas was more than double that of rural areas. There was almost a complete separation of rural and urban bird communities. Significantly more birds and more bird species were recorded in January compared to December. We conclude that differences between rural and urban areas in terms of winter conditions and the availability of resources are reflected in different bird communities in the two environments.

Winter Bird Assemblages in Rural and Urban Environments: A National Survey.

Directory of Open Access Journals (Sweden)

Piotr Tryjanowski

Full Text Available Urban development has a marked effect on the ecological and behavioural traits of many living organisms, including birds. In this paper, we analysed differences in the numbers of wintering birds between rural and urban areas in Poland. We also analysed species richness and abundance in relation to longitude, latitude, human population size, and landscape structure. All these parameters were analysed using modern statistical techniques incorporating species detectability. We counted birds in 156 squares (0.25 km2 each in December 2012 and again in January 2013 in locations in and around 26 urban areas across Poland (in each urban area we surveyed 3 squares and 3 squares in nearby rural areas. The influence of twelve potential environmental variables on species abundance and richness was assessed with Generalized Linear Mixed Models, Principal Components and Detrended Correspondence Analyses. Totals of 72 bird species and 89,710 individual birds were recorded in this study. On average (± SE 13.3 ± 0.3 species and 288 ± 14 individuals were recorded in each square in each survey. A formal comparison of rural and urban areas revealed that 27 species had a significant preference; 17 to rural areas and 10 to urban areas. Moreover, overall abundance in urban areas was more than double that of rural areas. There was almost a complete separation of rural and urban bird communities. Significantly more birds and more bird species were recorded in January compared to December. We conclude that differences between rural and urban areas in terms of winter conditions and the availability of resources are reflected in different bird communities in the two environments.

Distributed generation in small remote Northern communities

International Nuclear Information System (INIS)

Malcolm, D.G.

2012-01-01

The presentation discusses the physical and social challenges of reliable and environmentally sound electricity generation in remote northern communities in Canada. There are several hundred remote communities in the boreal region of Canada and throughout the Arctic. Electrical energy requirements are usually a few megawatts. Access to some Arctic remote communities is by air and small water craft only, except when winters are cold enough for winter roads to be constructed for a few weeks each year. These communities, as well as new mining operations and their camp communities, provide a market segment for small reactors. However, there are social acceptance hurdles to be addressed. Trust-building is a must when working with First Nations, Metis, and Inuit communities, and this requires community presence long before proposals for new generation facilities are presented.

Distributed generation in small remote Northern communities

Energy Technology Data Exchange (ETDEWEB)

Malcolm, D.G. [Yellowknife, North West Territories (Canada)

2012-07-01

The presentation discusses the physical and social challenges of reliable and environmentally sound electricity generation in remote northern communities in Canada. There are several hundred remote communities in the boreal region of Canada and throughout the Arctic. Electrical energy requirements are usually a few megawatts. Access to some Arctic remote communities is by air and small water craft only, except when winters are cold enough for winter roads to be constructed for a few weeks each year. These communities, as well as new mining operations and their camp communities, provide a market segment for small reactors. However, there are social acceptance hurdles to be addressed. Trust-building is a must when working with First Nations, Metis, and Inuit communities, and this requires community presence long before proposals for new generation facilities are presented.

Simulating the influences of various fire regimes on caribou winter habitat

Science.gov (United States)

Rupp, T. Scott; Olson, Mark; Adams, Layne G.; Dale, Bruce W.; Joly, Kyle; Henkelman, Jonathan; Collins, William B.; Starfield, Anthony M.

2006-01-01

Caribou are an integral component of high‐latitude ecosystems and represent a major subsistence food source for many northern people. The availability and quality of winter habitat is critical to sustain these caribou populations. Caribou commonly use older spruce woodlands with adequate terrestrial lichen, a preferred winter forage, in the understory. Changes in climate and fire regime pose a significant threat to the long‐term sustainability of this important winter habitat. Computer simulations performed with a spatially explicit vegetation succession model (ALFRESCO) indicate that changes in the frequency and extent of fire in interior Alaska may substantially impact the abundance and quality of winter habitat for caribou. We modeled four different fire scenarios and tracked the frequency, extent, and spatial distribution of the simulated fires and associated changes to vegetation composition and distribution. Our results suggest that shorter fire frequencies (i.e., less time between recurring fires) on the winter range of the Nelchina caribou herd in eastern interior Alaska will result in large decreases of available winter habitat, relative to that currently available, in both the short and long term. A 30% shortening of the fire frequency resulted in a 3.5‐fold increase in the area burned annually and an associated 41% decrease in the amount of spruce–lichen forest found on the landscape. More importantly, simulations with more frequent fires produced a relatively immature forest age structure, compared to that which currently exists, with few stands older than 100 years. This age structure is at the lower limits of stand age classes preferred by caribou from the Nelchina herd. Projected changes in fire regime due to climate warming and/or additional prescribed burning could substantially alter the winter habitat of caribou in interior Alaska and lead to changes in winter range use and/or population dynamics.

Finding Community Structures In Social Activity Data

KAUST Repository

Peng, Chengbin

2015-05-19

Social activity data sets are increasing in number and volume. Finding community structure in such data is valuable in many applications. For example, understand- ing the community structure of social networks may reduce the spread of epidemics or boost advertising revenue; discovering partitions in tra c networks can help to optimize routing and to reduce congestion; finding a group of users with common interests can allow a system to recommend useful items. Among many aspects, qual- ity of inference and e ciency in finding community structures in such data sets are of paramount concern. In this thesis, we propose several approaches to improve com- munity detection in these aspects. The first approach utilizes the concept of K-cores to reduce the size of the problem. The K-core of a graph is the largest subgraph within which each node has at least K connections. We propose a framework that accelerates community detection. It first applies a traditional algorithm that is relatively slow to the K-core, and then uses a fast heuristic to infer community labels for the remaining nodes. The second approach is to scale the algorithm to multi-processor systems. We de- vise a scalable community detection algorithm for large networks based on stochastic block models. It is an alternating iterative algorithm using a maximum likelihood ap- proach. Compared with traditional inference algorithms for stochastic block models, our algorithm can scale to large networks and run on multi-processor systems. The time complexity is linear in the number of edges of the input network. The third approach is to improve the quality. We propose a framework for non- negative matrix factorization that allows the imposition of linear or approximately linear constraints on each factor. An example of the applications is to find community structures in bipartite networks, which is useful in recommender systems. Our algorithms are compared with the results in recent papers and their quality and e

Detecting the overlapping and hierarchical community structure in complex networks

International Nuclear Information System (INIS)

Lancichinetti, Andrea; Fortunato, Santo; Kertesz, Janos

2009-01-01

Many networks in nature, society and technology are characterized by a mesoscopic level of organization, with groups of nodes forming tightly connected units, called communities or modules, that are only weakly linked to each other. Uncovering this community structure is one of the most important problems in the field of complex networks. Networks often show a hierarchical organization, with communities embedded within other communities; moreover, nodes can be shared between different communities. Here, we present the first algorithm that finds both overlapping communities and the hierarchical structure. The method is based on the local optimization of a fitness function. Community structure is revealed by peaks in the fitness histogram. The resolution can be tuned by a parameter enabling different hierarchical levels of organization to be investigated. Tests on real and artificial networks give excellent results.

Virality Prediction and Community Structure in Social Networks

Science.gov (United States)

Weng, Lilian; Menczer, Filippo; Ahn, Yong-Yeol

2013-08-01

How does network structure affect diffusion? Recent studies suggest that the answer depends on the type of contagion. Complex contagions, unlike infectious diseases (simple contagions), are affected by social reinforcement and homophily. Hence, the spread within highly clustered communities is enhanced, while diffusion across communities is hampered. A common hypothesis is that memes and behaviors are complex contagions. We show that, while most memes indeed spread like complex contagions, a few viral memes spread across many communities, like diseases. We demonstrate that the future popularity of a meme can be predicted by quantifying its early spreading pattern in terms of community concentration. The more communities a meme permeates, the more viral it is. We present a practical method to translate data about community structure into predictive knowledge about what information will spread widely. This connection contributes to our understanding in computational social science, social media analytics, and marketing applications.

Neurotic psychopathology and alexithymia among winter swimmers and controls--a prospective study.

Science.gov (United States)

Lindeman, Sari; Hirvonen, Jorma; Joukamaa, Matti

2002-05-01

Random samples of 25 voluntary Finnish winter swimmers (7 males, 18 females) and 11 controls (3 males, 8 females were followed prospectively during the winter season from October 1999 to May 2000 to (determine whether winter swimming is beneficial for mental well-being, as many of its practitioners claim. The Crown-Crisp Experimental Index (CCEI) was used for measuring free-floating anxiety, phobic anxiety, obsessionality, depression, somatic anxiety and hysteria, and the 20-item version of the Toronto Alexithymia Scale (TAS-20) for measuring alexithymia. Self-reported somatic and mental health and the reasons for and the frequency of winter-swimming were asked, too. As resealed by open questions, the winter swimmers reported positive effects of winter swimming. Several of the swimmers also told that they had started winter swimming to improve their physical and mental health. Their experience was that the swimming had relieved physical symptoms and made their mood more positive. However, we found no major differences between winter swimmers and controls in any CCEI or TAS variables. The structured questionnaires do not necessarily, however, reach subjective feelings and experiences.

Dynamical community structure of populations evolving on genotype networks

International Nuclear Information System (INIS)

Capitán, José A.; Aguirre, Jacobo; Manrubia, Susanna

2015-01-01

Neutral evolutionary dynamics of replicators occurs on large and heterogeneous networks of genotypes. These networks, formed by all genotypes that yield the same phenotype, have a complex architecture that conditions the molecular composition of populations and their movements on genome spaces. Here we consider as an example the case of populations evolving on RNA secondary structure neutral networks and study the community structure of the network revealed through dynamical properties of the population at equilibrium and during adaptive transients. We unveil a rich hierarchical community structure that, eventually, can be traced back to the non-trivial relationship between RNA secondary structure and sequence composition. We demonstrate that usual measures of modularity that only take into account the static, topological structure of networks, cannot identify the community structure disclosed by population dynamics

New winter hardy winter bread wheat cultivar (Triticum aestivum L. Voloshkova

Directory of Open Access Journals (Sweden)

Л. М. Голик

2007-12-01

Full Text Available Creation of Initial raw for breeding of winter wheat by change of the development type under low temperatures influence was described. Seeds of spring wheat were vernalized in aluminum weighting bottle. By using low temperatures at sawing of M2-6 at the begin ind of optimal terms of sawing of winter wheat, new winter-hardy variety of Voloshkova was bred.

To Everything There Is a Season: Summer-to-Winter Food Webs and the Functional Traits of Keystone Species.

Science.gov (United States)

Humphries, Murray M; Studd, Emily K; Menzies, Allyson K; Boutin, Stan

2017-11-01

From a trophic perspective, a seasonal increase in air temperature and photoperiod propagates as bottom-up pulse of primary production by plants, secondary production by herbivores, and tertiary production by carnivores. However, food web seasonality reflects not only abiotic variation in temperature and photoperiod, but also the composition of the biotic community and their functional responses to this variation. Some plants and animals-here referred to as seasonal specialists-decouple from food webs in winter through migration or various forms of metabolic arrest (e.g., senescence, diapause, and hibernation), whereas some plants and resident animals-here referred to as seasonal generalists-remain present and trophically coupled in winter. The co-occurrence of species with divergent responses to winter introduces seasonal variation in interaction strengths, resulting in summer-to-winter differences in trophic organization. Autumn cooling and shortening day length arrests primary productivity and cues seasonal herbivores to decouple, leaving generalist carnivores to concentrate their predation on the few generalist herbivores that remain resident, active, and vulnerable to predation in winter, which themselves feed on the few generalist plant structures available in winter. Thus, what was a bottom-up pulse, spread among many species in summer, including highly productive seasonal specialists, reverses into strong top-down regulation in winter that is top-heavy, and concentrated among a small number of generalist herbivores and their winter foods. Intermediate-sized, generalist herbivores that remain active and vulnerable to predation in winter are likely to be keystone species in seasonal food webs because they provide the essential ecosystem service of turning summer primary productivity into winter food for carnivores. Empirical examination of terrestrial mammals and their seasonal trophic status in the boreal forest and across an arctic-to-tropics seasonality

Associations between soil bacterial community structure and nutrient cycling functions in long-term organic farm soils following cover crop and organic fertilizer amendment.

Science.gov (United States)

Fernandez, Adria L; Sheaffer, Craig C; Wyse, Donald L; Staley, Christopher; Gould, Trevor J; Sadowsky, Michael J

2016-10-01

Agricultural management practices can produce changes in soil microbial populations whose functions are crucial to crop production and may be detectable using high-throughput sequencing of bacterial 16S rRNA. To apply sequencing-derived bacterial community structure data to on-farm decision-making will require a better understanding of the complex associations between soil microbial community structure and soil function. Here 16S rRNA sequencing was used to profile soil bacterial communities following application of cover crops and organic fertilizer treatments in certified organic field cropping systems. Amendment treatments were hairy vetch (Vicia villosa), winter rye (Secale cereale), oilseed radish (Raphanus sativus), buckwheat (Fagopyrum esculentum), beef manure, pelleted poultry manure, Sustane(®) 8-2-4, and a no-amendment control. Enzyme activities, net N mineralization, soil respiration, and soil physicochemical properties including nutrient levels, organic matter (OM) and pH were measured. Relationships between these functional and physicochemical parameters and soil bacterial community structure were assessed using multivariate methods including redundancy analysis, discriminant analysis, and Bayesian inference. Several cover crops and fertilizers affected soil functions including N-acetyl-β-d-glucosaminidase and β-glucosidase activity. Effects, however, were not consistent across locations and sampling timepoints. Correlations were observed among functional parameters and relative abundances of individual bacterial families and phyla. Bayesian analysis inferred no directional relationships between functional activities, bacterial families, and physicochemical parameters. Soil functional profiles were more strongly predicted by location than by treatment, and differences were largely explained by soil physicochemical parameters. Composition of soil bacterial communities was predictive of soil functional profiles. Differences in soil function were

Comparative proteomics reveals the physiological differences between winter tender shoots and spring tender shoots of a novel tea (Camellia sinensis L.) cultivar evergrowing in winter.

Science.gov (United States)

Liu, Shengjie; Gao, Jiadong; Chen, Zhongjian; Qiao, Xiaoyan; Huang, Hualin; Cui, Baiyuan; Zhu, Qingfeng; Dai, Zhangyan; Wu, Hualing; Pan, Yayan; Yang, Chengwei; Liu, Jun

2017-11-20

A recently discovered tea [Camellia sinensis (L.) O. Kuntze] cultivar can generate tender shoots in winter. We performed comparative proteomics to analyze the differentially accumulated proteins between winter and spring tender shoots of this clonal cultivar to reveal the physiological basis of its evergrowing character during winter. We extracted proteins from the winter and spring tender shoots (newly formed two leaves and a bud) of the evergrowing tea cultivar "Dongcha11" respectively. Thirty-three differentially accumulated high-confidence proteins were identified by matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF / TOF MS). Among these, 24 proteins had increased abundance while nine showed were decreased abundance in winter tender shoots as compared with the spring tender shoots. We categorized the differentially accumulated proteins into eight critical biological processes based on protein function annotation including photosynthesis, cell structure, protein synthesis & destination, transporters, metabolism of sugars and polysaccharides, secondary metabolism, disease/defense and proteins with unknown functions. Proteins with increased abundance in winter tender shoots were mainly related to the processes of photosynthesis, cytoskeleton and protein synthesis, whereas those with decreased abundance were correlated to metabolism and the secondary metabolism of polyphenolic flavonoids. Biochemical analysis showed that the total contents of soluble sugar and amino acid were higher in winter tender shoots while tea polyphenols were lower as compared with spring tender shoots. Our study suggested that the simultaneous increase in the abundance of photosynthesis-related proteins rubisco, plastocyanin, and ATP synthase delta chain, metabolism-related proteins eIF4 and protease subunits, and the cytoskeleton-structure associated proteins phosphatidylinositol transfer protein and profilin may be because of the adaptation of the

Fossil palm beetles refine upland winter temperatures in the Early Eocene Climatic Optimum.

Science.gov (United States)

Archibald, S Bruce; Morse, Geoffrey E; Greenwood, David R; Mathewes, Rolf W

2014-06-03

Eocene climate and associated biotic patterns provide an analog system to understand their modern interactions. The relationship between mean annual temperatures and winter temperatures-temperature seasonality-may be an important factor in this dynamic. Fossils of frost-intolerant palms imply low Eocene temperature seasonality into high latitudes, constraining average winter temperatures there to >8 °C. However, their presence in a paleocommunity may be obscured by taphonomic and identification factors for macrofossils and pollen. We circumvented these problems by establishing the presence of obligate palm-feeding beetles (Chrysomelidae: Pachymerina) at three localities (a fourth, tentatively) in microthermal to lower mesothermal Early Eocene upland communities in Washington and British Columbia. This provides support for warmer winter Eocene climates extending northward into cooler Canadian uplands.

Greater sage-grouse winter habitat use on the eastern edge of their range

Science.gov (United States)

Swanson, Christopher C.; Rumble, Mark A.; Grovenburg, Troy W.; Kaczor, Nicholas W.; Klaver, Robert W.; Herman-Brunson, Katie M.; Jenks, Jonathan A.; Jensen, Kent C.

2013-01-01

interaction between percent sagebrush canopy cover and sagebrush height (β = −0.01, SE ≤ 0.01; odds ratio = 0.987 [95% CI = 0.983–0.992]) also was significant. Management could focus on avoiding additional loss of sagebrush habitat, identifying areas of critical winter habitat, and implementing management actions based on causal mechanisms (e.g., soil moisture, precipitation) that affect sagebrush community structure in this region.

33 CFR 100.109 - Winter Harbor Lobster Boat Race, Winter Harbor, ME.

Science.gov (United States)

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Winter Harbor Lobster Boat Race, Winter Harbor, ME. 100.109 Section 100.109 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY REGATTAS AND MARINE PARADES SAFETY OF LIFE ON NAVIGABLE WATERS § 100.109 Winter Harbor...

Phylogenetic structure in tropical hummingbird communities

DEFF Research Database (Denmark)

Graham, Catherine H; Parra, Juan L; Rahbek, Carsten

2009-01-01

How biotic interactions, current and historical environment, and biogeographic barriers determine community structure is a fundamental question in ecology and evolution, especially in diverse tropical regions. To evaluate patterns of local and regional diversity, we quantified the phylogenetic...... composition of 189 hummingbird communities in Ecuador. We assessed how species and phylogenetic composition changed along environmental gradients and across biogeographic barriers. We show that humid, low-elevation communities are phylogenetically overdispersed (coexistence of distant relatives), a pattern...... that is consistent with the idea that competition influences the local composition of hummingbirds. At higher elevations communities are phylogenetically clustered (coexistence of close relatives), consistent with the expectation of environmental filtering, which may result from the challenge of sustaining...

A new hierarchical method to find community structure in networks

Science.gov (United States)

Saoud, Bilal; Moussaoui, Abdelouahab

2018-04-01

Community structure is very important to understand a network which represents a context. Many community detection methods have been proposed like hierarchical methods. In our study, we propose a new hierarchical method for community detection in networks based on genetic algorithm. In this method we use genetic algorithm to split a network into two networks which maximize the modularity. Each new network represents a cluster (community). Then we repeat the splitting process until we get one node at each cluster. We use the modularity function to measure the strength of the community structure found by our method, which gives us an objective metric for choosing the number of communities into which a network should be divided. We demonstrate that our method are highly effective at discovering community structure in both computer-generated and real-world network data.

Uncovering the community structure associated with the diffusion dynamics on networks

International Nuclear Information System (INIS)

Cheng, Xue-Qi; Shen, Hua-Wei

2010-01-01

As two main focuses of the study of complex networks, the community structure and the dynamics on networks have both attracted much attention in various scientific fields. However, it is still an open question how the community structure is associated with the dynamics on complex networks. In this paper, through investigating the diffusion process taking place on networks, we demonstrate that the intrinsic community structure of networks can be revealed by the stable local equilibrium states of the diffusion process. Furthermore, we show that such community structure can be directly identified through the optimization of the conductance of the network, which measures how easily the diffusion among different communities occurs. Tests on benchmark networks indicate that the conductance optimization method significantly outperforms the modularity optimization methods in identifying the community structure of networks. Applications to real world networks also demonstrate the effectiveness of the conductance optimization method. This work provides insights into the multiple topological scales of complex networks, and the community structure obtained can naturally reflect the diffusion capability of the underlying network

Long-term decline of a winter-resident bird community in Puerto Rico

Science.gov (United States)

J. Faaborg; W. J. Arendt; J. D. Toms; K. M. Dugger; W. A. Cox; M. Canals Mora

2013-01-01

Despite concern expressed two decades ago, there has been little recent discussion about continuing declines of migrant bird populations. Monitoring efforts have been focused almost exclusively on the breeding grounds. We describe the long-term decline of a winter-resident bird population in Guanica Commonwealth Forest, Puerto Rico, one of the last remaining tracts of...

Optimal community structure for social contagions

Science.gov (United States)

Su, Zhen; Wang, Wei; Li, Lixiang; Stanley, H. Eugene; Braunstein, Lidia A.

2018-05-01

Community structure is an important factor in the behavior of real-world networks because it strongly affects the stability and thus the phase transition order of the spreading dynamics. We here propose a reversible social contagion model of community networks that includes the factor of social reinforcement. In our model an individual adopts a social contagion when the number of received units of information exceeds its adoption threshold. We use mean-field approximation to describe our proposed model, and the results agree with numerical simulations. The numerical simulations and theoretical analyses both indicate that there is a first-order phase transition in the spreading dynamics, and that a hysteresis loop emerges in the system when there is a variety of initially adopted seeds. We find an optimal community structure that maximizes spreading dynamics. We also find a rich phase diagram with a triple point that separates the no-diffusion phase from the two diffusion phases.

Weather Support for the 2002 Winter Olympic and Paralympic Games.

Science.gov (United States)

Horel, J.; Potter, T.; Dunn, L.; Steenburgh, W. J.; Eubank, M.; Splitt, M.; Onton, D. J.

2002-02-01

The 2002 Winter Olympic and Paralympic Games will be hosted by Salt Lake City, Utah, during February-March 2002. Adverse weather during this period may delay sporting events, while snow and ice-covered streets and highways may impede access by the athletes and spectators to the venues. While winter snowstorms and other large-scale weather systems typically have widespread impacts throughout northern Utah, hazardous winter weather is often related to local terrain features (the Wasatch Mountains and Great Salt Lake are the most prominent ones). Examples of such hazardous weather include lake-effect snowstorms, ice fog, gap winds, downslope windstorms, and low visibility over mountain passes.A weather support system has been developed to provide weather information to the athletes, games officials, spectators, and the interested public around the world. This system is managed by the Salt Lake Olympic Committee and relies upon meteorologists from the public, private, and academic sectors of the atmospheric science community. Weather forecasting duties will be led by National Weather Service forecasters and a team of private, weather forecasters organized by KSL, the Salt Lake City NBC television affiliate. Other government agencies, commercial firms, and the University of Utah are providing specialized forecasts and support services for the Olympics. The weather support system developed for the 2002 Winter Olympics is expected to provide long-term benefits to the public through improved understanding,monitoring, and prediction of winter weather in the Intermountain West.

Soil shapes community structure through fire.

Science.gov (United States)

Ojeda, Fernando; Pausas, Juli G; Verdú, Miguel

2010-07-01

Recurrent wildfires constitute a major selecting force in shaping the structure of plant communities. At the regional scale, fire favours phenotypic and phylogenetic clustering in Mediterranean woody plant communities. Nevertheless, the incidence of fire within a fire-prone region may present strong variations at the local, landscape scale. This study tests the prediction that woody communities on acid, nutrient-poor soils should exhibit more pronounced phenotypic and phylogenetic clustering patterns than woody communities on fertile soils, as a consequence of their higher flammability and, hence, presumably higher propensity to recurrent fire. Results confirm the predictions and show that habitat filtering driven by fire may be detected even in local communities from an already fire-filtered regional flora. They also provide a new perspective from which to consider a preponderant role of fire as a key evolutionary force in acid, infertile Mediterranean heathlands.

Small Winter Thunderstorm with Sprites and Strong Positive Discharge

Science.gov (United States)

Suzuki, Tomoyuki; Hayakawa, Masashi; Michimoto, Koichiro

A sprite campaign was conducted in the Hokuriku area of Japan during a winter of 2004/2005. On the basis of a combined analysis of the data from various instruments (CCD cameras, radar, VHF/LF∼MF lightning mapping system, field mill network, and ELF detector), we studied meteorological and electrical structures for winter thunderstorms and sprite-producing positive discharge. Typical winter sprite parent thunderstorms had a meso-scale cloud area with embedded small convective cells. Some small winter thunderstorms accompanied by the most frequent sprite events were found to cause 2∼3 sprite events during a short interval of about 3∼5 min. When the sprites were observed, the extent of the convective cells at 20 dBZ counter was atmost ∼20 × 20 km. The VHF sources associated with sprites were located near south of the convective cell and were mapped within very small areas of at most ∼10 × 10 km. This fact shows that some small winter thunderstorms can generate large positive charge associated with sprites. We will present the analysis of such a small thunderstorms with sprites and positive lightning discharges.

The History of Winter: teachers as scientists

Science.gov (United States)

Koenig, L.; Courville, Z.; Wasilewski, P. J.; Gow, T.; Bender, K. J.

2013-12-01

The History of Winter (HOW) is a NASA Goddard Space Flight Center-funded teacher enrichment program that was started by Dr. Peter Wasilewski (NASA), Dr. Robert Gabrys (NASA) and Dr. Tony Gow (Cold Regions Research and Engineering Laboratory, or CRREL) in 2001 and continues with support and involvement of scientists from both the NASA Cryospheric Sciences Laboratory and CREEL. The program brings educators mostly from middle and high schools but also from state parks, community colleges and other institutions from across the US to the Northwood School (a small, private boarding school) in Lake Placid, NY for one week to learn about several facets of winter, polar, and snow research, including the science and history of polar ice core research, lake ice formation and structure, snow pack science, winter ecology, and remote sensing including current and future NASA cryospheric missions. The program receives support from the Northwood School staff to facilitate the program. The goal of the program is to create 'teachers as scientists' which is achieved through several hands-on field experiences in which the teachers have the opportunity to work with polar researchers from NASA, CRREL and partner Universities to dig and sample snow pits, make ice thin sections from lake ice, make snow shelters, and observe under-ice lake ecology. The hands-on work allows the teachers to use the same tools and techniques used in polar research while simultaneously introducing science concepts and activities to support their classroom work. The ultimate goal of the program is to provide the classroom teachers with the opportunity to learn about current and timely cryospheric research as well as to engage in real fieldwork experiences. The enthusiasm generated during the week-long program is translated into classroom activities with guidance from scientists, teachers and educational professionals. The opportunity to engage with polar researchers, both young investigators and renowned

Floristic and vegetation structure of a grassland plant community on shallow basalt in southern Brazil

Directory of Open Access Journals (Sweden)

Marcelo Fett Pinto

2013-03-01

Full Text Available Few studies have adequately described the floristic and structural features of natural grasslands associated with shallow basalt soils in southern Brazil. This study was carried out on natural grazing land used for livestock production in the municipality of Santana do Livramento, in the Campanha region of the state of Rio Grande do Sul, Brazil. The aim of the study was to describe the floristic and structural diversity of the area. The floristic list obtained comprises 229 plant taxa from 40 botanical families, with a predominance of the families Poaceae (62, Asteraceae (28, Fabaceae (16 and Cyperaceae (12. The estimated diversity and evenness in the community were 3.00 and 0.874, respectively. Bare soil and rock outcrops accounted for 19.3% of the area, resulting in limited forage availability. Multivariate analysis revealed two well-defined groups among the sampling units. One group showed a high degree of internal aggregation, associated with deep soils, and was characterized by the presence of tussocks, whereas the other was less aggregate and was characterized by prostrate species growing on shallow soil. Ordination analysis indicated a gradient of moisture and of soil depth in the study area, resulting in different vegetation patterns. These patterns were analogous to the vegetation physiognomies described for Uruguayan grasslands. Overall, the grassland community studied is similar to others found throughout southern Brazil, although it harbors more winter forage species. In addition, the rare grass Paspalum indecorum Mez is locally dominant in some patches, behaving similarly to P. notatum Fl., a widespread grass that dominates extensive grassland areas in southern Brazil.

Change in fish community structure in the Barents Sea.

Directory of Open Access Journals (Sweden)

Michaela Aschan

Full Text Available Change in oceanographic conditions causes structural alterations in marine fish communities, but this effect may go undetected as most monitoring programs until recently mainly have focused on oceanography and commercial species rather than on whole ecosystems. In this paper, the objective is to describe the spatial and temporal changes in the Barents Sea fish community in the period 1992-2004 while taking into consideration the observed abundance and biodiversity patterns for all 82 observed fish species. We found that the spatial structure of the Barents Sea fish community was determined by abiotic factors such as temperature and depth. The observed species clustered into a deep assemblage, a warm water southern assemblage, both associated with Atlantic water, and a cold water north-eastern assemblage associated with mixed water. The latitude of the cold water NE and warm water S assemblages varied from year to year, but no obvious northward migration was observed over time. In the period 1996-1999 we observed a significant reduction in total fish biomass, abundance, mean fish weight, and a change in community structure including an increase in the pelagic/demersal ratio. This change in community structure is probably due to extremely cold conditions in 1996 impacting on a fish community exposed to historically high fishing rates. After 1999 the fish community variables such as biomass, abundance, mean weight, P/D ratio as well as community composition did not return to levels of the early 90s, although fishing pressure and climatic conditions returned to earlier levels.

Functional and phylogenetic structure of island bird communities.

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Si, Xingfeng; Cadotte, Marc W; Zeng, Di; Baselga, Andrés; Zhao, Yuhao; Li, Jiaqi; Wu, Yiru; Wang, Siyu; Ding, Ping

2017-05-01

Biodiversity change in anthropogenically transformed habitats is often nonrandom, yet the nature and importance of the different mechanisms shaping community structure are unclear. Here, we extend the classic Theory of Island Biogeography (TIB) to account for nonrandom processes by incorporating species traits and phylogenetic relationships into a study of faunal relaxation following habitat loss and fragmentation. Two possible mechanisms can create nonrandom community patterns on fragment islands. First, small and isolated islands might consist of similar or closely related species because they are environmentally homogeneous or select for certain shared traits, such as dispersal ability. Alternatively, communities on small islands might contain more dissimilar or distantly related species than on large islands because limited space and resource availability result in greater competitive exclusion among species with high niche overlap. Breeding birds were surveyed on 36 islands and two mainland sites annually from 2010 to 2014 in the Thousand Island Lake region, China. We assessed community structure of breeding birds on these subtropical land-bridge islands by integrating species' trait and evolutionary distances. We additionally analysed habitat heterogeneity and variance in size ratios to distinguish biotic and abiotic processes of community assembly. Results showed that functional-phylogenetic diversity increased with island area, and decreased with isolation. Bird communities on the mainland were more diverse and generally less clustered than island bird communities and not different than randomly assembled communities. Bird communities on islands tend to be functionally similar and phylogenetically clustered, especially on small and isolated islands. The nonrandom decline in species diversity and change in bird community structure with island area and isolation, along with the relatively homogeneous habitats on small islands, support the environmental

Covariance, correlation matrix, and the multiscale community structure of networks.

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Shen, Hua-Wei; Cheng, Xue-Qi; Fang, Bin-Xing

2010-07-01

Empirical studies show that real world networks often exhibit multiple scales of topological descriptions. However, it is still an open problem how to identify the intrinsic multiple scales of networks. In this paper, we consider detecting the multiscale community structure of network from the perspective of dimension reduction. According to this perspective, a covariance matrix of network is defined to uncover the multiscale community structure through the translation and rotation transformations. It is proved that the covariance matrix is the unbiased version of the well-known modularity matrix. We then point out that the translation and rotation transformations fail to deal with the heterogeneous network, which is very common in nature and society. To address this problem, a correlation matrix is proposed through introducing the rescaling transformation into the covariance matrix. Extensive tests on real world and artificial networks demonstrate that the correlation matrix significantly outperforms the covariance matrix, identically the modularity matrix, as regards identifying the multiscale community structure of network. This work provides a novel perspective to the identification of community structure and thus various dimension reduction methods might be used for the identification of community structure. Through introducing the correlation matrix, we further conclude that the rescaling transformation is crucial to identify the multiscale community structure of network, as well as the translation and rotation transformations.

Community structures and role detection in music networks

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Teitelbaum, T.; Balenzuela, P.; Cano, P.; Buldú, Javier M.

2008-12-01

We analyze the existence of community structures in two different social networks using data obtained from similarity and collaborative features between musical artists. Our analysis reveals some characteristic organizational patterns and provides information about the driving forces behind the growth of the networks. In the similarity network, we find a strong correlation between clusters of artists and musical genres. On the other hand, the collaboration network shows two different kinds of communities: rather small structures related to music bands and geographic zones, and much bigger communities built upon collaborative clusters with a high number of participants related through the period the artists were active. Finally, we detect the leading artists inside their corresponding communities and analyze their roles in the network by looking at a few topological properties of the nodes.

Investigating Effects of Invasive Species on Plant Community Structure

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Franklin, Wilfred

2008-01-01

In this article, the author presents a field study project that explores factors influencing forest community structure and lifts the veil off of "plant blindness." This ecological study consists of three laboratories: (1) preliminary field trip to the study site; (2) plant survey; and (3) analyzing plant community structure with descriptive…

Community Structural Instability, Anomie, Imitation and Adolescent Suicidal Behavior

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Thorlindsson, Thorolfur; Bernburg, Jon Gunnar

2009-01-01

The current study examines the contextual effects of community structural characteristics, as well as the mediating role of key social mechanisms, on youth suicidal behavior in Iceland. We argue that the contextual influence of community structural instability on youth suicidal behavior should be mediated by weak attachment to social norms and…

Comparing Model Ozone Loss during the SOLVE and SOLVE-2 Winters

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Drdla, K.

2003-01-01

Model simulations have been used to analyze the factors influencing ozone loss during the 1999-2000 and 2002-2003 js. For both winters, the evolution of the Arctic vortex from November to April has been simulated using a trajectory-based microphysical and photochemical model. Extensive PSC formation and strong ozone depletion are evident in both winters. However, the ozone loss begins earlier in the 2002-2003 winter, with significant ozone depletion by early January. Analysis of the model results shows that during December 2002 not only cold temperatures but also the vortex structure was critical, allowing PSC-processed air parcels to experience significant solar exposure. The resultant ozone loss can be differentiated from ozone loss that occurs in the springtime, in particular because of the continued exposure to PSCs. For example, chlorine reactivation by the PSCs causes ozone loss to be insensitive to denitrification. Therefore, diagnosing the extent of ozone loss early in the winter is critical In understanding the overall winter-long ozone depletion.

Winter Weather Emergencies

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Severe winter weather can lead to health and safety challenges. You may have to cope with Cold related health problems, including ... there are no guarantees of safety during winter weather emergencies, you can take actions to protect yourself. ...

Epidemic spreading in weighted scale-free networks with community structure

International Nuclear Information System (INIS)

Chu, Xiangwei; Guan, Jihong; Zhang, Zhongzhi; Zhou, Shuigeng

2009-01-01

Many empirical studies reveal that the weights and community structure are ubiquitous in various natural and artificial networks. In this paper, based on the SI disease model, we investigate the epidemic spreading in weighted scale-free networks with community structure. Two exponents, α and β, are introduced to weight the internal edges and external edges, respectively; and a tunable probability parameter q is also introduced to adjust the strength of community structure. We find the external weighting exponent β plays a much more important role in slackening the epidemic spreading and reducing the danger brought by the epidemic than the internal weighting exponent α. Moreover, a novel result we find is that the strong community structure is no longer helpful for slackening the danger brought by the epidemic in the weighted cases. In addition, we show the hierarchical dynamics of the epidemic spreading in the weighted scale-free networks with communities which is also displayed in the famous BA scale-free networks

Aircraft measurements to characterize polluted winter boundary layers: Overview of twin otter flights during the Utah Winter Fine Particulate Matter Study

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Brown, S. S.; Baasandorj, M.; Franchin, A.; Middlebrook, A. M.; Goldberger, L.; Thornton, J. A.; Dube, W. P.; McDuffie, E. E.; Womack, C.; Fibiger, D. L.; Moravek, A.; Clark, J. C.; Murphy, J. G.; Mitchell, R.

2017-12-01

Winter air pollution is a significant public health concern. In many regions of the U.S., Europe and Asia, wintertime particulate matter concentrations exceed national and / or international air quality standards. Winter air pollution also represents a scientific challenge because these events occur during stagnation events in shallow, vertically stratified boundary layers whose composition is difficult to probe from surface level measurements. Chemical processes responsible for the conversion of primary emissions to secondary pollutants such as ammonium nitrate aerosol vary with height above ground level. Sources of oxidants are poorly understood and may result from both local chemical production and mixing between shallow inversion layers and background air. During the Utah Winter Fine Particulate Study (UWFPS) in January - February 2017, the NOAA twin otter executed 23 research flights with a payload designed to characterize the formation of ammonium nitrate aerosol in three mountain valleys of northern Utah (Salt Lake, Cache, and Utah). These valleys are subject to periodic episodes of winter aerosol pollution well in excess of U.S. national ambient air quality standards. This presentation will describe the measurement strategy of the twin otter flights to address the specific features of aerosol pollution within winter boundary layer of this region. This strategy is relevant to understanding the broader issue of winter air pollution in other regions and potentially to the design of future studies. The presentation will summarize findings from UWFPS related to boundary layer structure, emissions and chemical processes responsible for ammonium nitrate aerosol in this region.

Detecting highly overlapping community structure by greedy clique expansion

OpenAIRE

Lee, Conrad; Reid, Fergal; McDaid, Aaron; Hurley, Neil

2010-01-01

In complex networks it is common for each node to belong to several communities, implying a highly overlapping community structure. Recent advances in benchmarking indicate that existing community assignment algorithms that are capable of detecting overlapping communities perform well only when the extent of community overlap is kept to modest levels. To overcome this limitation, we introduce a new community assignment algorithm called Greedy Clique Expansion (GCE). The algorithm identifies d...

Planning of traumatological hospital resources for a major winter sporting event as illustrated by the 2005 Winter Universiad.

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Oberladstaetter, J; Kamelger, F S; Rosenberger, R; Dallapozza, Ch; Struve, P; Luger, T; Fink, Ch; Attal, R

2009-03-01

The 22nd Student World Winter Games took place in January 2005 in Innsbruck and Seefeld, Austria. Exactly 1,500 athletes of 50 nationalities competed in 69 events in ten winter sports. A total number of 750 functionaries, 800 volunteers and 85,000 spectators participated in the second largest winter sports event behind the Olympic winter games. The aim of this study was to evaluate the needed resources to ensure traumatological care for an event of that size. At the medical "call-center" all consultations, as well as patient data, diagnosis, and medical treatment were recorded using a preset protocol. Further, all patients treated in the University Hospital Innsbruck were registered with an emphasis on trauma patients. Forty-eight of 65 patients transported to the hospital as a result of the Universiade were trauma patients, 37 of whom were athletes. The gender distribution was 34:14 (m:f). Ice hockey players had the highest rate of injury (25% of all injured athletes), followed by alpine skiers (20.8% of injured athletes). The highest ISS was nine. Forty-three patients got ambulatory treatment, five were admitted to the hospital and surgical treatment was conducted in three cases. Mean patient number was 4.8 per day. No additional personnel, structural, or technical hospital resources were needed to accommodate a large winter sports event like the Universiad. Thus, a level-B trauma center with an emergency room and independent traumatological department with around the clock surgical capability seems to be sufficient to provide traumatological care for an event of this size if the possibility of patient transport to a larger facility exists in the case of catastrophic events.

Performance and microbial community structure of a polar Arctic Circle aerobic granular sludge system operating at low temperature.

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Gonzalez-Martinez, Alejandro; Muñoz-Palazon, Barbara; Maza-Márquez, Paula; Rodriguez-Sanchez, Alejandro; Gonzalez-Lopez, Jesus; Vahala, Riku

2018-05-01

The aim of this work was to study the performance and microbial community structure of a polar Arctic Circle aerobic granular sludge (AGS) system operating at low temperature. Thus, an AGS bioreactor was operated at 7, 5 and 3 °C of temperature using a cold-adapted sludge from Lapland. At 5 °C, it yielded acceptable conversion rates, in terms of nitrogen, phosphorous, and organic matter. However, under 3 °C a negligible nitrogen and phosphorous removal performance was observed. Below 5 °C, scanning electron microscopy studies showed a wispy, non-dense and irregular granular structure with a strong outgrowth of filamentous. Moreover, Illumina next-generation sequencing showed a heterogeneous microbial population where SM1K20 (Archaea), Trichosporon domesticum (Fungus), and Zooglea, Arcobacter and Acinetobacter (Bacteria) were the dominant phylotypes. Our study suggests that AGS technologies inoculated with North Pole sludge could be operated, in cold regions for a period longer than 3 months (winter season) under 5 °C of water temperature. Copyright © 2018 Elsevier Ltd. All rights reserved.

Community structure informs species geographic distributions

KAUST Repository

Montesinos-Navarro, Alicia; Estrada, Alba; Font, Xavier; Matias, Miguel G.; Meireles, Catarina; Mendoza, Manuel; Honrado, Joao P.; Prasad, Hari D.; Vicente, Joana R.; Early, Regan

2018-01-01

spatial resolution. However, survival of individuals is determined by processes that happen at small spatial scales. The relative abundance of coexisting species (i.e. 'community structure') reflects assembly processes occurring at small scales

Light structures phototroph, bacterial and fungal communities at the soil surface.

Directory of Open Access Journals (Sweden)

Lawrence O Davies

Full Text Available The upper few millimeters of soil harbour photosynthetic microbial communities that are structurally distinct from those of underlying bulk soil due to the presence of light. Previous studies in arid zones have demonstrated functional importance of these communities in reducing soil erosion, and enhancing carbon and nitrogen fixation. Despite being widely distributed, comparative understanding of the biodiversity of the soil surface and underlying soil is lacking, particularly in temperate zones. We investigated the establishment of soil surface communities on pasture soil in microcosms exposed to light or dark conditions, focusing on changes in phototroph, bacterial and fungal communities at the soil surface (0-3 mm and bulk soil (3-12 mm using ribosomal marker gene analyses. Microbial community structure changed with time and structurally similar phototrophic communities were found at the soil surface and in bulk soil in the light exposed microcosms suggesting that light can influence phototroph community structure even in the underlying bulk soil. 454 pyrosequencing showed a significant selection for diazotrophic cyanobacteria such as Nostoc punctiforme and Anabaena spp., in addition to the green alga Scenedesmus obliquus. The soil surface also harboured distinct heterotrophic bacterial and fungal communities in the presence of light, in particular, the selection for the phylum Firmicutes. However, these light driven changes in bacterial community structure did not extend to the underlying soil suggesting a discrete zone of influence, analogous to the rhizosphere.

A spectral method to detect community structure based on distance modularity matrix

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Yang, Jin-Xuan; Zhang, Xiao-Dong

2017-08-01

There are many community organizations in social and biological networks. How to identify these community structure in complex networks has become a hot issue. In this paper, an algorithm to detect community structure of networks is proposed by using spectra of distance modularity matrix. The proposed algorithm focuses on the distance of vertices within communities, rather than the most weakly connected vertex pairs or number of edges between communities. The experimental results show that our method achieves better effectiveness to identify community structure for a variety of real-world networks and computer generated networks with a little more time-consumption.

Fuel poverty, excess winter deaths, and energy costs in Vermont: Burdensome for whom?

International Nuclear Information System (INIS)

Teller-Elsberg, Jonathan; Sovacool, Benjamin; Smith, Taylor; Laine, Emily

2016-01-01

Energy, whether from electricity, natural gas, heating oil, propane, kerosene, or wood, is essential for the well-being of many Americans, yet those who spend more than 10 percent of their income of energy services can be considered “fuel poor.” This study assesses the extent and severity of fuel poverty in Vermont. It analyzes energy burdens in Vermont by household income deciles, using data from the Census Bureau's American Community Survey. Approximately 71,000 people suffered from fuel poverty in Vermont in 2000, and in 2012 the number rose to 125,000, or one in five Vermonters. Startlingly, fuel poverty grew 76 percent during this period. Excess winter deaths, caused potentially by fuel poverty, kill more Vermonters each year than car crashes. The article then provides 12 policy recommendations based on a small sample of elite semi-structured research interviews. These include suggestions that the Vermont legislature better fund investments in weatherization among low-income households; that community groups and social service agencies scale up the training of energy efficiency coaches; that state agencies endorse improvements in housing efficiency and appropriate fuel switching; and that utilities and fuel providers offer extra assistance for disconnected households and allow for on-bill financing of efficiency improvements. - Highlights: • Those spending 10 percent of their monthly income or more on energy services are in “fuel poverty”. • In this study we analyze the energy burden in Vermont by household income deciles. • We calculate that excess winter deaths caused potentially by fuel poverty kill more Vermonters each year than car crashes. • We conclude with implications for energy planners and policymakers.

How mammalian predation contributes to tropical tree community structure.

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Paine, C E Timothy; Beck, Harald; Terborgh, John

2016-12-01

The recruitment of seedlings from seeds is the key demographic transition for rain forest trees. Though tropical forest mammals are known to consume many seeds, their effects on tree community structure remain little known. To evaluate their effects, we monitored 8,000 seeds of 24 tree species using exclosure cages that were selectively permeable to three size classes of mammals for up to 4.4 years. Small and medium-bodied mammals removed many more seeds than did large mammals, and they alone generated beta diversity and negative density dependence, whereas all mammals reduced diversity and shaped local species composition. Thus, small and medium-bodied mammals more strongly contributed to community structure and promoted species coexistence than did large mammals. Given that seedling recruitment is seed limited for most species, alterations to the composition of the community of mammalian seed predators is expected to have long-term consequences for tree community structure in tropical forests. © 2016 by the Ecological Society of America.

A taxonomic, functional, and phylogenetic perspective on the community assembly of passerine birds along an elevational gradient in southwest China.

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He, Xuelian; Luo, Kang; Brown, Calum; Lin, Luxiang

2018-03-01

Integrating multiple facets of biodiversity to describe spatial and temporal distribution patterns is one way of revealing the mechanisms driving community assembly. We assessed the species, functional, and phylogenetic composition and structure of passerine bird communities along an elevational gradient both in wintering and breeding seasons in the Ailao Mountains, southwest China, in order to identify the dominant ecological processes structuring the communities and how these processes change with elevation and season. Our research confirms that the highest taxonomic diversity, and distinct community composition, was found in the moist evergreen broadleaf forest at high elevation in both seasons. Environmental filtering was the dominant force at high elevations with relatively cold and wet climatic conditions, while the observed value of mean pairwise functional and phylogenetic distances of low elevation was constantly higher than expectation in two seasons, suggested interspecific competition could play the key role at low elevations, perhaps because of relative rich resource result from complex vegetation structure and human-induced disturbance. Across all elevations, there was a trend of decreasing intensity of environmental filtering whereas increasing interspecific competition from wintering season to breeding season. This was likely due to the increased resource availability but reproduction-associated competition in the summer months. In general, there is a clear justification for conservation efforts to protect entire elevational gradients in the Ailao Mountains, given the distinct taxonomic, functional, and phylogenetic compositions and also elevational migration pattern in passerine bird communities.

Long-term variation in the winter resident bird community of Guanica Forest, Puerto Rico: lessons for measuring and monitoring species richness.

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John Faaborg; Katie M. Dugger; Wayne J. Arendt

2007-01-01

Because the winter season is potentially limiting for migratory birds, understanding their nonbreeding distributional patterns is essential. At a given site, patterns of species occurrence and abundance may vary over time and, within a species, wintering strategies may vary with regard to the degree that individuals are site-faithful both within and between winters. We...

Epidemic spreading on complex networks with overlapping and non-overlapping community structure

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Shang, Jiaxing; Liu, Lianchen; Li, Xin; Xie, Feng; Wu, Cheng

2015-02-01

Many real-world networks exhibit community structure where vertices belong to one or more communities. Recent studies show that community structure plays an import role in epidemic spreading. In this paper, we investigate how the extent of overlap among communities affects epidemics. In order to experiment on the characteristic of overlapping communities, we propose a rewiring algorithm that can change the community structure from overlapping to non-overlapping while maintaining the degree distribution of the network. We simulate the Susceptible-Infected-Susceptible (SIS) epidemic process on synthetic scale-free networks and real-world networks by applying our rewiring algorithm. Experiments show that epidemics spread faster on networks with higher level of overlapping communities. Furthermore, overlapping communities' effect interacts with the average degree's effect. Our work further illustrates the important role of overlapping communities in the process of epidemic spreading.

Bacterial community structure in the Cerasus sachalinensis Kom ...

African Journals Online (AJOL)

Jane

2011-07-21

Jul 21, 2011 ... The bacterial community structures of the Cerasus sachalinensis Kom. rhizosphere in wild and cultivated soil were studied and the community changes in different growth stages were analyzed by the PCR-denaturing gradient gel electrophoresis (PCR-DGGE) method. The results showed that the bacterial ...

[Paediatric emergencies; example of the management of winter epidemics].

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Mercier, Jean-Christophe; Bellettre, Xavier; Lejay, Émilie; Desmarest, Marie; Titomanlio, Luigi

2015-01-01

Every year, epidemics of viral bronchiolitis and gastroenteritis occur with a significant increase in the number of visits (by a factor 1.8) and hospitalisations that can over-exceed bed capacity leading to transfer sick children to other hospitals. This kind of hospital 'crisis' is not limited to paediatrics, big cities or western nations. It is a worldwide worrying problem. Because our hospital sits in the Northern districts of Paris where a large community of m.ncants lives in poverty, our number of visits is high (mean 250 per day), and winter epidemics further jeopardise the difficult equilibrium achieved between quality management and waiting times. Thus, we have taken various initiatives in terms of organisation of the paediatric emergency department and other wards, including a "fast track" clinic, the opening of beds dedicated to winter epidemics, the institution of a "bed manager" in order to more easily find a bed, and a larger use of home hospitalisations. Furthermore, we created a specific committee which may decide on various indicators of tension whether it is necessary to cancel programmed hospitalisations or surgery.in order to resolve the emergency crisis. This kind of organisation can serve as a model for other hospitals facing winter epidemics crises.

Convergent evolution of modularity in metabolic networks through different community structures

Directory of Open Access Journals (Sweden)

Zhou Wanding

2012-09-01

Full Text Available Abstract Background It has been reported that the modularity of metabolic networks of bacteria is closely related to the variability of their living habitats. However, given the dependency of the modularity score on the community structure, it remains unknown whether organisms achieve certain modularity via similar or different community structures. Results In this work, we studied the relationship between similarities in modularity scores and similarities in community structures of the metabolic networks of 1021 species. Both similarities are then compared against the genetic distances. We revisited the association between modularity and variability of the microbial living environments and extended the analysis to other aspects of their life style such as temperature and oxygen requirements. We also tested both topological and biological intuition of the community structures identified and investigated the extent of their conservation with respect to the taxomony. Conclusions We find that similar modularities are realized by different community structures. We find that such convergent evolution of modularity is closely associated with the number of (distinct enzymes in the organism’s metabolome, a consequence of different life styles of the species. We find that the order of modularity is the same as the order of the number of the enzymes under the classification based on the temperature preference but not on the oxygen requirement. Besides, inspection of modularity-based communities reveals that these communities are graph-theoretically meaningful yet not reflective of specific biological functions. From an evolutionary perspective, we find that the community structures are conserved only at the level of kingdoms. Our results call for more investigation into the interplay between evolution and modularity: how evolution shapes modularity, and how modularity affects evolution (mainly in terms of fitness and evolvability. Further, our results

Convergent evolution of modularity in metabolic networks through different community structures.

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Zhou, Wanding; Nakhleh, Luay

2012-09-14

It has been reported that the modularity of metabolic networks of bacteria is closely related to the variability of their living habitats. However, given the dependency of the modularity score on the community structure, it remains unknown whether organisms achieve certain modularity via similar or different community structures. In this work, we studied the relationship between similarities in modularity scores and similarities in community structures of the metabolic networks of 1021 species. Both similarities are then compared against the genetic distances. We revisited the association between modularity and variability of the microbial living environments and extended the analysis to other aspects of their life style such as temperature and oxygen requirements. We also tested both topological and biological intuition of the community structures identified and investigated the extent of their conservation with respect to the taxonomy. We find that similar modularities are realized by different community structures. We find that such convergent evolution of modularity is closely associated with the number of (distinct) enzymes in the organism's metabolome, a consequence of different life styles of the species. We find that the order of modularity is the same as the order of the number of the enzymes under the classification based on the temperature preference but not on the oxygen requirement. Besides, inspection of modularity-based communities reveals that these communities are graph-theoretically meaningful yet not reflective of specific biological functions. From an evolutionary perspective, we find that the community structures are conserved only at the level of kingdoms. Our results call for more investigation into the interplay between evolution and modularity: how evolution shapes modularity, and how modularity affects evolution (mainly in terms of fitness and evolvability). Further, our results call for exploring new measures of modularity and network

Strong influence of regional species pools on continent-wide structuring of local communities.

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Lessard, Jean-Philippe; Borregaard, Michael K; Fordyce, James A; Rahbek, Carsten; Weiser, Michael D; Dunn, Robert R; Sanders, Nathan J

2012-01-22

There is a long tradition in ecology of evaluating the relative contribution of the regional species pool and local interactions on the structure of local communities. Similarly, a growing number of studies assess the phylogenetic structure of communities, relative to that in the regional species pool, to examine the interplay between broad-scale evolutionary and fine-scale ecological processes. Finally, a renewed interest in the influence of species source pools on communities has shown that the definition of the source pool influences interpretations of patterns of community structure. We use a continent-wide dataset of local ant communities and implement ecologically explicit source pool definitions to examine the relative importance of regional species pools and local interactions for shaping community structure. Then we assess which factors underlie systematic variation in the structure of communities along climatic gradients. We find that the average phylogenetic relatedness of species in ant communities decreases from tropical to temperate regions, but the strength of this relationship depends on the level of ecological realism in the definition of source pools. We conclude that the evolution of climatic niches influences the phylogenetic structure of regional source pools and that the influence of regional source pools on local community structure is strong.

Centralized Drinking Water Treatment Operations Shape Bacterial and Fungal Community Structure.

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Ma, Xiao; Vikram, Amit; Casson, Leonard; Bibby, Kyle

2017-07-05

Drinking water microbial communities impact opportunistic pathogen colonization and corrosion of water distribution systems, and centralized drinking water treatment represents a potential control for microbial community structure in finished drinking water. In this article, we examine bacterial and fungal abundance and diversity, as well as the microbial community taxonomic structure following each unit operation in a conventional surface water treatment plant. Treatment operations drove the microbial composition more strongly than sampling time. Both bacterial and fungal abundance and diversity decreased following sedimentation and filtration; however, only bacterial abundance and diversity was significantly impacted by free chlorine disinfection. Similarly, each treatment step was found to shift bacterial and fungal community beta-diversity, with the exception of disinfection on the fungal community structure. We observed the enrichment of bacterial and fungal taxa commonly found in drinking water distribution systems through the treatment process, for example, Sphingomonas following filtration and Leptospirillium and Penicillium following disinfection. Study results suggest that centralized drinking water treatment processes shape the final drinking water microbial community via selection of community members and that the bacterial community is primarily driven by disinfection while the eukaryotic community is primarily controlled by physical treatment processes.

Seasonality and structure of the arthropod community in a forested ...

African Journals Online (AJOL)

The structure of an arthropod community in the forest floor vegetation was studied in a low altitude (about 700 m a.s.l.) forest valley in the Uluguru Mountains near Morogoro, Tanzania, by monthly sweep net sampling during one year (December 1996-November 1997). The community structure of arthropods changed ...

Floral colour versus phylogeny in structuring subalpine flowering communities.

Science.gov (United States)

McEwen, Jamie R; Vamosi, Jana C

2010-10-07

The relative number of seeds produced by competing species can influence the community structure; yet, traits that influence seed production, such as pollinator attraction and floral colour, have received little attention in community ecology. Here, we analyse floral colour using reflectance spectra that include near-UV and examined the phylogenetic signal of floral colour. We found that coflowering species within communities tended to be more divergent in floral colour than expected by chance. However, coflowering species were not phylogenetically dispersed, in part due to our finding that floral colour is a labile trait with a weak phylogenetic signal. Furthermore, while we found that locally rare and common species exhibited equivalent floral colour distances from their coflowering neighbours, frequent species (those found in more communities) exhibited higher colour distances from their coflowering neighbours. Our findings support recent studies, which have found that (i) plant lineages exhibit frequent floral colour transitions; and (ii) traits that influence local population dynamics contribute to community structure.

Soil bacterial community and functional shifts in response to altered snowpack in moist acidic tundra of northern Alaska

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Ricketts, Michael P.; Poretsky, Rachel S.; Welker, Jeffrey M.; Gonzalez-Meler, Miquel A.

2016-09-01

Soil microbial communities play a central role in the cycling of carbon (C) in Arctic tundra ecosystems, which contain a large portion of the global C pool. Climate change predictions for Arctic regions include increased temperature and precipitation (i.e. more snow), resulting in increased winter soil insulation, increased soil temperature and moisture, and shifting plant community composition. We utilized an 18-year snow fence study site designed to examine the effects of increased winter precipitation on Arctic tundra soil bacterial communities within the context of expected ecosystem response to climate change. Soil was collected from three pre-established treatment zones representing varying degrees of snow accumulation, where deep snow ˜ 100 % and intermediate snow ˜ 50 % increased snowpack relative to the control, and low snow ˜ 25 % decreased snowpack relative to the control. Soil physical properties (temperature, moisture, active layer thaw depth) were measured, and samples were analysed for C concentration, nitrogen (N) concentration, and pH. Soil microbial community DNA was extracted and the 16S rRNA gene was sequenced to reveal phylogenetic community differences between samples and determine how soil bacterial communities might respond (structurally and functionally) to changes in winter precipitation and soil chemistry. We analysed relative abundance changes of the six most abundant phyla (ranging from 82 to 96 % of total detected phyla per sample) and found four (Acidobacteria, Actinobacteria, Verrucomicrobia, and Chloroflexi) responded to deepened snow. All six phyla correlated with at least one of the soil chemical properties (% C, % N, C : N, pH); however, a single predictor was not identified, suggesting that each bacterial phylum responds differently to soil characteristics. Overall, bacterial community structure (beta diversity) was found to be associated with snow accumulation treatment and all soil chemical properties. Bacterial

Ecological impacts of winter water level drawdowns on lake littoral zones: A review

Science.gov (United States)

Roy, Allison

2017-01-01

Freshwater littoral zones harbor diverse ecological communities and serve numerous ecosystem functions that are controlled, in part, by natural water level fluctuations. However, human alteration of lake hydrologic regimes beyond natural fluctuations threaten littoral zone ecological integrity. One type of hydrologic alteration in lakes is winter water level drawdowns, which are frequently employed for hydropower, flood control, and macrophyte control, among other purposes. Here, we synthesize the abiotic and biotic responses to annual and novel winter water level drawdowns in littoral zones of lakes and reservoirs. The dewatering, freezing, and increased erosion of exposed lakebeds drive changes in the littoral zone. Shoreline-specific physicochemical conditions such as littoral slope and shoreline exposure further induce modifications. Loss of fine sediment decreases nutrient availability over time, but desiccation may promote a temporary nutrient pulse upon re-inundation. Annual winter drawdowns can decrease taxonomic richness of macrophytes and benthic invertebrates and shift assemblage composition to favor taxa with r-selected life history strategies and with functional traits resistant to direct and indirect drawdown effects. Fish assemblages, though less directly affected by winter drawdowns (except where there is critically low dissolved oxygen), experience negative effects via indirect pathways like decreased food resources and spawning habitat. We identify eight general research gaps to guide future research that could improve our understanding about the complex effects of winter drawdowns on littoral zone ecology.

Seasonal Variations in the Structure of Phytoplankton Communities near Nuclear Power Plants

International Nuclear Information System (INIS)

Lee, S.-K.; Choi, H.-C.; Moon, H.-T.

2015-01-01

To investigate effects of thermal discharge effluent from nuclear power plants on the surrounding marine environment, especially on the phytoplankton community, environmental data gained by seasonal survey around Hanbit and Hanul nuclear power plants during the periods of 11 years from 1999 to 2009 were analysed. The data used were from environmental survey and assessment around Hanbit and Hanul nuclear power plants of Korea during the period of 11 years from 1999 to 2009. The purposes of this study are (1) to evaluate the effect of operation of nuclear power plants on phytoplankton community, (2) to find out whether the thermal discharge affected negatively phytoplankton community, and (3) to evaluate the difference of thermal discharge influence on phytoplankton community between West and East coastal area, Korea. Through this study, (1) quantitative evaluation of the effect of thermal discharge effluent on marine ecology, especially on abundance and biomass of phytoplankton were performed, (2) found that depending on the season, the effect of thermal discharge effluent from nuclear power plant on the marine environment is not always negative (i.e. warm water may increase or prevent decline of abundance in seasons with low temperature such as winter in Hanbit area), and (3) found that same thermal discharge effluent rate to different marine environments, such as west and east coast of Korea, does not result in same effect on the marine ecosystem. (author)

Community-oriented support and research structures

Energy Technology Data Exchange (ETDEWEB)

Attig, Norbert; Eickermann, Thomas; Gibbon, Paul; Lippert, Thomas, E-mail: th.lippert@fz-juelich.d [Institute for Advanced Simulation, Juelich Supercomputing Centre, Forschungszentrum Juelich, 52425 Juelich (Germany)

2009-07-01

Coordinated by the Partnership for Advanced Computing in Europe (PRACE) Europe is restructuring and strengthening its high-performance computing infrastructure with the aim to create a model HPC ecosystem. At the tip of the pyramid, up to six centres are envisaged that will operate systems of the highest performance class. The HPC Research Infrastructure (HPC-RI) will comprise European, national and regional centres. Science communities are integral partners, strong links will include Grid and Cloud users. The HPC-RI strives at providing scientists all over Europe, on the one hand, with unlimited and independent access to state-of-the-art computer resources in all performance classes and, on the other hand, with a world-class pan-European competence and support network. While the hardware-oriented buildup of the infrastructure is making progress, high-quality user support and software development in the upcoming era of unprecedented parallelism and exascale on the horizon have become the imminent challenges. This has been clearly recognized by the European Commission, who will issue calls for proposals to fund petascale software development in summer 2009. Although traditional support structures are well established in Europe's major supercomputing centres, it is questionable if these structures are able to meet the challenges of the future: in general, support structures are based on cross-disciplinary computer science and mathematics teams; disciplinary computational science support usually is given in an ad-hoc, project-oriented manner. In this paper, we describe our approach to establish a suitable support structure-Simulation Laboratories (SL). SLs are currently being established at the Juelich Supercomputing Centre of the Forschungszentrum Juelich (FZJ) and at the Steinbuch Centre for Computing (SCC) of the Karlsruhe Institute for Technology (KIT) in Germany. While SLs are community-oriented, i.e. each SL focusses on a specific community, they are

Community-oriented support and research structures

International Nuclear Information System (INIS)

Attig, Norbert; Eickermann, Thomas; Gibbon, Paul; Lippert, Thomas

2009-01-01

Coordinated by the Partnership for Advanced Computing in Europe (PRACE) Europe is restructuring and strengthening its high-performance computing infrastructure with the aim to create a model HPC ecosystem. At the tip of the pyramid, up to six centres are envisaged that will operate systems of the highest performance class. The HPC Research Infrastructure (HPC-RI) will comprise European, national and regional centres. Science communities are integral partners, strong links will include Grid and Cloud users. The HPC-RI strives at providing scientists all over Europe, on the one hand, with unlimited and independent access to state-of-the-art computer resources in all performance classes and, on the other hand, with a world-class pan-European competence and support network. While the hardware-oriented buildup of the infrastructure is making progress, high-quality user support and software development in the upcoming era of unprecedented parallelism and exascale on the horizon have become the imminent challenges. This has been clearly recognized by the European Commission, who will issue calls for proposals to fund petascale software development in summer 2009. Although traditional support structures are well established in Europe's major supercomputing centres, it is questionable if these structures are able to meet the challenges of the future: in general, support structures are based on cross-disciplinary computer science and mathematics teams; disciplinary computational science support usually is given in an ad-hoc, project-oriented manner. In this paper, we describe our approach to establish a suitable support structure-Simulation Laboratories (SL). SLs are currently being established at the Juelich Supercomputing Centre of the Forschungszentrum Juelich (FZJ) and at the Steinbuch Centre for Computing (SCC) of the Karlsruhe Institute for Technology (KIT) in Germany. While SLs are community-oriented, i.e. each SL focusses on a specific community, they are structured

Winter maintenance performance measure.

Science.gov (United States)

2016-01-01

The Winter Performance Index is a method of quantifying winter storm events and the DOTs response to them. : It is a valuable tool for evaluating the States maintenance practices, performing post-storm analysis, training : maintenance personnel...

Clustering coefficient and community structure of bipartite networks

Science.gov (United States)

Zhang, Peng; Wang, Jinliang; Li, Xiaojia; Li, Menghui; Di, Zengru; Fan, Ying

2008-12-01

Many real-world networks display natural bipartite structure, where the basic cycle is a square. In this paper, with the similar consideration of standard clustering coefficient in binary networks, a definition of the clustering coefficient for bipartite networks based on the fraction of squares is proposed. In order to detect community structures in bipartite networks, two different edge clustering coefficients LC4 and LC3 of bipartite networks are defined, which are based on squares and triples respectively. With the algorithm of cutting the edge with the least clustering coefficient, communities in artificial and real world networks are identified. The results reveal that investigating bipartite networks based on the original structure can show the detailed properties that is helpful to get deep understanding about the networks.

Association Mapping of Malting Quality Quantitative Trait Loci in Winter Barley: Positive Signals from Small Germplasm Arrays

Directory of Open Access Journals (Sweden)

Lucía Gutiérrez

2011-11-01

Full Text Available Malting quality comprises one of the most economically relevant set of traits in barley ( L.. It is a complex phenotype, expensive and difficult to measure, that would benefit from a marker-assisted selection strategy. Malting quality is a target of the U.S. Barley Coordinated Agricultural Project (CAP and development of winter habit malting barley varieties is a key objective of the U.S. barley research community. The objective of this work was to detect quantitative trait loci (QTL for malting quality traits in a winter breeding program that is a component of the U.S. Barley CAP. We studied the association between five malting quality traits and 3072 single nucleotide polymorphisms (SNPs from the barley oligonucleotide pool assay (BOPA 1 and 2, assayed in advanced inbred lines from the Oregon State University (OSU breeding program from three germplasm arrays (CAP I, CAP II, and CAP III. After comparing 16 models we selected a structured association model with posterior probabilities inferred from software STRUCTURE (QK approach to use on all germplasm arrays. Most of the marker-trait associations are germplasm- and environment-specific and close to previously mapped genes and QTL relevant for malt and beer quality. We found alleles fixed by random genetic drift, novel unmasked alleles, and genetic-background interaction. In a relatively small population size study we provide strong evidence for detecting true QTL.

Hydrologic aspects of marsh ponds during winter on the Gulf Coast Chenier Plain, USA: Effects of structural marsh management

Science.gov (United States)

Bolduc, F.; Afton, A.D.

2004-01-01

The hydrology of marsh ponds influences aquatic invertebrate and waterbird communities. Hydrologic variables in marsh ponds of the Gulf Coast Chenier Plain are potentially affected by structural marsh management (SMM: levees, water control structures and impoundments) that has been implemented since the 1950s. Assuming that SMM restricts tidal flows and drainage of rainwater, we predicted that SMM would increase water depth, and concomitantly decrease salinity and transparency in impounded marsh ponds. We also predicted that SMM would increase seasonal variability in water depth in impounded marsh ponds because of the potential incapacity of water control structures to cope with large flooding events. In addition, we predicted that SMM would decrease spatial variability in water depth. Finally, we predicted that ponds of impounded freshwater (IF), oligohaline (IO), and mesohaline (IM) marshes would be similar in water depth, temperature, dissolved oxygen (O2), and transparency. Using a priori multivariate analysis of variance (MANOVA) contrast, we tested these predictions by comparing hydrologic variables within ponds of impounded and unimpounded marshes during winters 1997-1998 to 1999-2000 on Rockefeller State Wildlife Refuge, near Grand Chenier, Louisiana. Specifically, we compared hydrologic variables (1) between IM and unimpounded mesohaline marsh ponds (UM); and (2) among IF, IO, and IM marshes ponds. As predicted, water depth was higher and salinity and O2 were lower in IM than in UM marsh ponds. However, temperature and transparency did not differ between IM and UM marsh ponds. Water depth varied more among months in IM marsh ponds than within those of UM marshes, and variances among and within ponds were lower in IM than UM marshes. Finally, all hydrologic variables, except salinity, were similar among IF, IO, and IM marsh ponds. Hydrologic changes within marsh ponds due to SMM should (1) promote benthic invertebrate taxa that tolerate low levels of O2 and

Estimating winter survival of winter wheat by simulations of plant frost tolerance

NARCIS (Netherlands)

Bergjord Olsen, A.K.; Persson, T.; Wit, de A.; Nkurunziza, L.; Sindhøj, E.; Eckersten, H.

2018-01-01

Based on soil temperature, snow depth and the grown cultivar's maximum attainable level of frost tolerance (LT50c), the FROSTOL model simulates development of frost tolerance (LT50) and winter damage, thereby enabling risk calculations for winter wheat survival. To explore the accuracy of this

Incorporating Yearly Derived Winter Wheat Maps Into Winter Wheat Yield Forecasting Model

Science.gov (United States)

Skakun, S.; Franch, B.; Roger, J.-C.; Vermote, E.; Becker-Reshef, I.; Justice, C.; Santamaría-Artigas, A.

2016-01-01

Wheat is one of the most important cereal crops in the world. Timely and accurate forecast of wheat yield and production at global scale is vital in implementing food security policy. Becker-Reshef et al. (2010) developed a generalized empirical model for forecasting winter wheat production using remote sensing data and official statistics. This model was implemented using static wheat maps. In this paper, we analyze the impact of incorporating yearly wheat masks into the forecasting model. We propose a new approach of producing in season winter wheat maps exploiting satellite data and official statistics on crop area only. Validation on independent data showed that the proposed approach reached 6% to 23% of omission error and 10% to 16% of commission error when mapping winter wheat 2-3 months before harvest. In general, we found a limited impact of using yearly winter wheat masks over a static mask for the study regions.

Winter weather demand considerations.

Science.gov (United States)

2015-04-01

Winter weather has varied effects on travel behavior. Using 418 survey responses from the Northern Virginia : commuting area of Washington, D.C. and binary logit models, this study examines travel related changes under : different types of winter wea...

Temporal and Spatial Diversity of Bacterial Communities in Coastal Waters of the South China Sea

Science.gov (United States)

Du, Jikun; Xiao, Kai; Li, Li; Ding, Xian; Liu, Helu; Lu, Yongjun; Zhou, Shining

2013-01-01

Bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems. Temporal and geographical patterns in ocean bacterial communities have been observed in many studies, but the temporal and spatial patterns in the bacterial communities from the South China Sea remained unexplored. To determine the spatiotemporal patterns, we generated 16S rRNA datasets for 15 samples collected from the five regularly distributed sites of the South China Sea in three seasons (spring, summer, winter). A total of 491 representative sequences were analyzed by MOTHUR, yielding 282 operational taxonomic units (OTUs) grouped at 97% stringency. Significant temporal variations of bacterial diversity were observed. Richness and diversity indices indicated that summer samples were the most diverse. The main bacterial group in spring and summer samples was Alphaproteobacteria, followed by Cyanobacteria and Gammaproteobacteria, whereas Cyanobacteria dominated the winter samples. Spatial patterns in the samples were observed that samples collected from the coastal (D151, D221) waters and offshore (D157, D1512, D224) waters clustered separately, the coastal samples harbored more diverse bacterial communities. However, the temporal pattern of the coastal site D151 was contrary to that of the coastal site D221. The LIBSHUFF statistics revealed noticeable differences among the spring, summer and winter libraries collected at five sites. The UPGMA tree showed there were temporal and spatial heterogeneity of bacterial community composition in coastal waters of the South China Sea. The water salinity (P=0.001) contributed significantly to the bacteria-environment relationship. Our results revealed that bacterial community structures were influenced by environmental factors and community-level changes in 16S-based diversity were better explained by spatial patterns than by temporal patterns. PMID:23785512

The influence of sowing period and seeding norm on autumn vegetation, winter hardiness and yield of winter cereal crops

Directory of Open Access Journals (Sweden)

Potapova G. N.

2017-10-01

Full Text Available the winter wheat and triticale in the middle part of the Ural Mountains haven’t been seeded before. The technology of winter crop cultivation should be improved due to the production of new varieties of winter rye. Winter hardiness and yield of winter rye are higher in comparison with winter triticale and especially with winter wheat. The sowing period and the seeding rate influence the amount of yield and winter hardiness. The winter hardiness of winter cereals and the yield of the rye variety Iset sowed on August 25 and the yield of the triticale variety Bashkir short-stalked and wheat Kazanskaya 560 sowed on August 15 were higher. It is important to sow winter grain in local conditions in the second half of August. The sowing this period allows to provide plants with the necessary amount of positive temperatures (450–500 °C. This helps the plants to form 3–4 shoots of tillering and a mass of 10 dry plants reaching 3–5 grams. The winter grain crops in the middle part of the Ural Mountains should be sown with seeding rates of 6 and 7 million of sprouting grains per 1 ha, and the seeds must be cultivated with fungicidal preparation before seeding.

Phylogenetic structure of arbuscular mycorrhizal fungal communities along an elevation gradient.

Science.gov (United States)

Egan, Cameron P; Callaway, Ragan M; Hart, Miranda M; Pither, Jason; Klironomos, John

2017-04-01

Despite the importance of arbuscular mycorrhizal (AM) fungi within terrestrial ecosystems, we know little about how natural AM fungal communities are structured. To date, the majority of studies examining AM fungal community diversity have focused on single habitats with similar environmental conditions, with relatively few studies having assessed the diversity of AM fungi over large-scale environmental gradients. In this study, we characterized AM fungal communities in the soil along a high-elevation gradient in the North American Rocky Mountains. We focused on phylogenetic patterns of AM fungal communities to gain insight into how AM fungal communities are naturally assembled. We found that alpine AM fungal communities had lower phylogenetic diversity relative to lower elevation communities, as well as being more heterogeneous in composition than either treeline or subalpine communities. AM fungal communities were phylogenetically clustered at all elevations sampled, suggesting that environmental filtering, either selection by host plants or fungal niches, is the primary ecological process structuring communities along the gradient.

A checklist of the winter bird community in different habitat types of Rosekandy Tea Estate of Assam, India

Directory of Open Access Journals (Sweden)

A. Ahmed

2014-02-01

Full Text Available This study was aimed at preparing an inventory of the avifauna and to document the species composition of birds during winter in different habitat types of Rosekandy Tea Estate of Cachar District of Assam. Four habitat types, viz., tea plantation, ecotone zone, secondary growth forest and water bodies were selected within the tea estate and surveyed from mid-December 2010 (early winter to mid-April 2011 (late winter covering four months of survey. A total of 88 species were recorded during the survey period with the highest number of species in ecotone zone (n=63, followed by secondary forest (n=60, tea plantation (n=48 and water bodies (n=17. The species were further categorized into different feeding and habitat guilds to study the distribution of bird species in different habitat types according to various guilds.

Function assessment of coastal ecosystem based on phytoplankton community structure

DEFF Research Database (Denmark)

Haraguchi, Lumi

2018-01-01

on phytoplankton community structure; and 3) investigating the role of planktonic communities on the cycling of dissolved organic matter. Those objectives were addressed focusing the temperate mesohaline estuary of Roskilde Fjord (Denmark). Paper I, explores the use of Pulse-shape recording flow cytometry (PFCM...... as an energy reservoir, buffering changes in the nutrient supply. Finally, the results embedded in this thesis demonstrate the importance of integrating different time scales to understand functioning of phytoplankton communities. Phytoplankton dynamics should not be regarded just in light of inorganic......This Ph.D. project aimed to improve the knowledge on phytoplankton community structure and its influence in the carbon transfer and nutrient cycling in coastal waters, by: 1) assessing the importance of phytoplankton

Importance of mixotrophic nanoplankton in Aysén Fjord (Southern Chile) during austral winter

Science.gov (United States)

Czypionka, Till; Vargas, Cristian A.; Silva, Nelson; Daneri, Giovanni; González, Humberto E.; Iriarte, José Luis

2011-03-01

Mixotrophy, the combination of autotrophic and heterotrophic nutrition in the same organism, is widespread in planktonic algae. Several reports from temperate and high-latitude fjords in Scandinavia suggest the occurrence of a niche in late summer and autumn during post-bloom conditions in which mixotrophic algae can become important grazers in pelagic ecosystems, accessing the nutrients bound in their prey to overcome nutrient limitation. Here, we experimentally determined the trophic modes and bacterivory rates for the nanoplankton community (2-20 μm) in Aysén Fjord located in the Chilean Northern Patagonia during two contrasting seasons: winter and spring. While mixotrophic nanoplankton was virtually absent from the system in spring, in winter at occasions it even constituted the dominant trophic group of the nanoplankton with abundances of >900 cells mL -1. This indicates a second niche for mixotrophs in winter, when mixotrophy allows overcoming light limitation.

Fragmentation alters stream fish community structure in dendritic ecological networks.

Science.gov (United States)

Perkin, Joshuah S; Gido, Keith B

2012-12-01

Effects of fragmentation on the ecology of organisms occupying dendritic ecological networks (DENs) have recently been described through both conceptual and mathematical models, but few hypotheses have been tested in complex, real-world ecosystems. Stream fishes provide a model system for assessing effects of fragmentation on the structure of communities occurring within DENs, including how fragmentation alters metacommunity dynamics and biodiversity. A recently developed habitat-availability measure, the "dendritic connectivity index" (DCI), allows for assigning quantitative measures of connectivity in DENs regardless of network extent or complexity, and might be used to predict fish community response to fragmentation. We characterized stream fish community structure in 12 DENs in the Great Plains, USA, during periods of dynamic (summer) and muted (fall) discharge regimes to test the DCI as a predictive model of fish community response to fragmentation imposed by road crossings. Results indicated that fish communities in stream segments isolated by road crossings had reduced species richness (alpha diversity) relative to communities that maintained connectivity with the surrounding DEN during summer and fall. Furthermore, isolated communities had greater dissimilarity (beta diversity) to downstream sites notisolated by road crossings during summer and fall. Finally, dissimilarity among communities within DENs decreased as a function of increased habitat connectivity (measured using the DCI) for summer and fall, suggesting that communities within highly connected DENs tend to be more homogeneous. Our results indicate that the DCI is sensitive to community effects of fragmentation in riverscapes and might be used by managers to predict ecological responses to changes in habitat connectivity. Moreover, our findings illustrate that relating structural connectivity of riverscapes to functional connectivity among communities might aid in maintaining metacommunity

Effect of agricultural management regimes on Burkholderia community structure in soil

NARCIS (Netherlands)

Salles, Joanna; van Elsas, J.D.; Van Veen, J.A.

2006-01-01

The main objective of this study was to determine the Burkholderia community structure associated with areas under different agricultural management and to evaluate to which extent this community structure is affected by changes in agricultural management. Two fields with distinct soil history

Effect of agricultural management regime on Burkholderia community structure in soil

NARCIS (Netherlands)

Salles, J.F.; Elsas, van J.D.; Veen, van J.A.

2006-01-01

The main objective of this study was to determine the Burkholderia community structure associated with areas under different agricultural management and to evaluate to which extent this community structure is affected by changes in agricultural management. Two fields with distinct soil history

Effect of agricultural management regime on Burkholderia community structure in soil

NARCIS (Netherlands)

Salles, J. F.; van Elsas, J. D.; van Veen, J. A.

The main objective of this study was to determine the Burkholderia community structure associated with areas under different agricultural management and to evaluate to which extent this community structure is affected by changes in agricultural management. Two fields with distinct soil history

Use of human-made nesting structures by wild bees in an urban environment

OpenAIRE

Fortel, Laura; Henry, Mickaël; Guilbaud, Laurent; Mouret, Hugues; Vaissière, Bernard

2016-01-01

Most bees display an array of strategies for building their nests, and the availability of nesting resources plays a significant role in organizing bee communities. Although urbanization can cause local species extinction, many bee species persist in urbanized areas. We studied the response of a bee community to winter-installed humanmade nesting structures (bee hotels and soil squares, i.e. 0.5 m deep holes filled with soil) in urbanized sites. We investigated the colonization pattern of the...

The nuclear winter

International Nuclear Information System (INIS)

Velikhow, Y.P.

1986-01-01

Nuclear winter is an example of possible secondary effects, and if we speak of secondary we are thinking of small-scale second-order effects, but a nuclear winter is not a second-order effect. If you calculate the amount of heat produced by a nuclear explosion, it is a very small amount which does not have any chance of changing the Earth's climate, but a nuclear explosion drives or stars some new mechanism - the mechanism of nuclear winter - after 100 megatons of dust are transferred to the upper atmosphere. Another example of such amplification is radioactive fall-out, especially long-life radioactive fall-out after the possible elimination of the nuclear power industry, nuclear storage and distribution of storage waste around the globe. This is a very powerful amplification mechanism

Greater sage-grouse winter habitat use on the eastern edge of their range

Science.gov (United States)

Christopher C. Swanson; Mark A. Rumble; Nicholas W. Kaczor; Robert W. Klaver; Katie M. Herman-Brunson; Jonathan A. Jenks; Kent C. Jensen

2013-01-01

Greater sage-grouse (Centrocercus urophasianus) at the western edge of the Dakotas occur in the transition zone between sagebrush and grassland communities. These mixed sagebrush (Artemisia sp.) and grasslands differ from those habitats that comprise the central portions of the sage-grouse range; yet, no information is available on winter habitat selection within this...

Community structure, population dynamics and diversity of fungi in a full-scale membrane bioreactor (MBR) for urban wastewater treatment.

Science.gov (United States)

Maza-Márquez, P; Vilchez-Vargas, R; Kerckhof, F M; Aranda, E; González-López, J; Rodelas, B

2016-11-15

Community structure, population dynamics and diversity of fungi were monitored in a full-scale membrane bioreactor (MBR) operated throughout four experimental phases (Summer 2009, Autumn 2009, Summer 2010 and Winter, 2012) under different conditions, using the 18S-rRNA gene and the intergenic transcribed spacer (ITS2-region) as molecular markers, and a combination of temperature-gradient gel electrophoresis and 454-pyrosequencing. Both total and metabolically-active fungal populations were fingerprinted, by amplification of molecular markers from community DNA and retrotranscribed RNA, respectively. Fingerprinting and 454-pyrosequencing evidenced that the MBR sheltered a dynamic fungal community composed of a low number of species, in accordance with the knowledge of fungal diversity in freshwater environments, and displaying a medium-high level of functional organization with few numerically dominant phylotypes. Population shifts were experienced in strong correlation with the changes of environmental variables and operation parameters, with pH contributing the highest level of explanation. Phylotypes assigned to nine different fungal Phyla were detected, although the community was mainly composed of Ascomycota, Basidiomycota and Chytridiomycota/Blastocladiomycota. Prevailing fungal phylotypes were affiliated to Saccharomycetes and Chytridiomycetes/Blastocladiomycetes, which displayed antagonistic trends in their relative abundance throughout the experimental period. Fungi identified in the activated sludge were closely related to genera of relevance for the degradation of organic matter and trace-organic contaminants, as well as genera of dimorphic fungi potentially able to produce plant operational issues such as foaming or biofouling. Phylotypes closely related to genera of human and plant pathogenic fungi were also detected. Copyright © 2016 Elsevier Ltd. All rights reserved.

Human exploitation and benthic community structure on a tropical intertidal mudflat

NARCIS (Netherlands)

Boer, de W.F.; Prins, H.H.T.

2002-01-01

Human exploitation of intertidal marine invertebrates is known to alter benthic community structure. This study describes the impact that harvesting by women and children has on the intertidal community structure of the mudflats of the Saco on Inhaca Island, Mozambique, by comparing the benthic

Stable pelagic vertebrate community structure through extreme Paleogene greenhouse conditions

Science.gov (United States)

Sibert, E. C.; Friedman, M.; Hull, P. M.; Hunt, G.; Norris, R. D.

2016-02-01

The species composition (structure) and energy transfer (function) of an ecosystem is reflected by the presence and type of consumers that it supports. Here we use ichthyoliths, microfossil fish teeth and shark denticles, to assess the ecological variability of the pelagic fish community structure and composition from the Late Cretaceous to the middle Eocene from a drill core in the South Pacific gyre (DSDP Site 596). We find that the overall vertebrate community structure, as measured by the relative abundance of sharks to ray-finned fishes, has a punctuated change at the Cretaceous/Paleogene mass extinction. The vertebrate community structure remained stable throughout the Paleogene despite a five-fold increase in overall abundance of ichthyoliths during the extreme greenhouse of the Early Eocene. Further, we use a novel system to quantify the morphological variation in fish teeth. We find that the morphospace occupied by the tooth assemblage is conserved throughout the interval, with a slight expansion following the Cretaceous-Paleogene mass extinction, and the evolution of a distinct morphotype-group around the Paleocene-Eocene boundary. While there are elevated rates of morphotype origination and extinction following the Cretaceous-Paleogene mass extinction, the extreme greenhouse warming of the Early Eocene and associated increase in fish production produce near-zero origination and extinction rates. The relative stability in composition of the pelagic vertebrate community during intervals of extreme climate change and across large ranges of total fish accumulation, suggests that pelagic ecosystem structure is robust to climate events, and that the overall structure of the pelagic fish community may be decoupled from both climate and ecosystem function.

Interannual variations of net community production and air-sea CO2 flux from winter to spring in the western subarctic North Pacific

International Nuclear Information System (INIS)

Midorikawa, Takashi; Ogawa, Kan; Nemoto, Kazuhiro; Kamiya, Hitomi; Umeda, Takafumi; Hiraishi, Naotaka; Wada, Akira; Ishii, Masao

2003-01-01

The role of spring biological production for the air-sea CO 2 flux was quantified in the Western Subarctic Gyre (48 deg N, 165 deg E), where the vertical profile of temperature revealed the existence of a temperature minimum (Tmin) layer in the North Pacific. The vertical profiles of temperature, salinity, dissolved oxygen, nutrients and dissolved inorganic carbon, DIC, in the upper water column were significantly variable year by year in spring, 1996-2000. Correspondingly, surface seawater at this site in spring was supersaturated with CO 2 in 1997, 1999 and 2000, but was undersaturated in 1996 and 1998. The concentrations of DIC and nutrients in the winter mixed layer were estimated from those in the Tmin layer in spring with a correction for particle decomposition based on the apparent oxygen utilization. The net community production (NCP) and air-sea CO 2 flux from winter to spring were calculated from the vertically integrated deficits of DIC and nutrients in the upper water column between the two seasons. The calculation of the carbon budget indicated large interannual variations of NCP (0-13 mmol/m 2 /d) and CO 2 efflux (4-16 mmol/m 2 /d) for this period. The CO 2 efflux was generally low in the year when NCP was high. The close coupling between biological production and CO 2 efflux suggested the important role of the changes in the mixed-layer depth, as a key process controlling both processes, especially of the timing, so that a decrease in the mixed-layer depth could result in the activation of biological production. The early biological consumption of the surface DIC concentration could shorten the period for acting as a source for atmospheric CO 2 and depress the CO 2 efflux in the Western Subarctic Gyre from winter to spring in 1996 and 1998. On the contrary, in 1997, persistently deep vertical mixing until late spring could suppress the biological activity and give rise to long-lasting CO 2 efflux

Microbial community structure characteristics associated membrane fouling in A/O-MBR system.

Science.gov (United States)

Gao, Da-Wen; Wen, Zhi-Dan; Li, Bao; Liang, Hong

2014-02-01

The study demonstrated the potential relationship between microbial community structure and membrane fouling in an anoxic-oxic membrane bioreactor (A/O-MBR). The results showed that the microbial community structure in biocake was different with aerobic mixture, and the dominant populations were out of sync during the fouling process. Based on microbial community structure and metabolites analysis, the results showed that the succession of microbial community might be the leading factor to the variation of metabolites, and it might be the primary cause of membrane fouling. The rise of Shannon diversity index (H) of the microbial community in A/O-MBR went with the gradually serious membrane fouling. Pareto-Lorenz curve was used to describe the evenness of microbial distribution in A/O-MBR, and the result indicated when community evenness was low, the membrane fouling took place smoothly or slightly, otherwise, high evenness of microbial community would lead to more seriously membrane fouling. Copyright © 2013 Elsevier Ltd. All rights reserved.

A new dynamic null model for phylogenetic community structure

NARCIS (Netherlands)

Pigot, Alex L; Etienne, Rampal S

Phylogenies are increasingly applied to identify the mechanisms structuring ecological communities but progress has been hindered by a reliance on statistical null models that ignore the historical process of community assembly. Here, we address this, and develop a dynamic null model of assembly by

Changes in the Bacterial Community Structure of Remediated Anthracene-Contaminated Soils

Science.gov (United States)

Delgado-Balbuena, Laura; Bello-López, Juan M.; Navarro-Noya, Yendi E.; Rodríguez-Valentín, Analine; Luna-Guido, Marco L.; Dendooven, Luc

2016-01-01

Mixing soil or adding earthworms (Eisenia fetida (Savigny, 1826)) accelerated the removal of anthracene, a polycyclic aromatic hydrocarbon, from a pasture and an arable soil, while a non-ionic surfactant (Surfynol® 485) inhibited the removal of the contaminant compared to the untreated soil. It was unclear if the treatments affected the soil bacterial community and consequently the removal of anthracene. Therefore, the bacterial community structure was monitored by means of 454 pyrosequencing of the 16S rRNA gene in the pasture and arable soil mixed weekly, amended with Surfynol® 485, E. fetida or organic material that served as food for the earthworms for 56 days. In both soils, the removal of anthracene was in the order: mixing soil weekly (100%) > earthworms applied (92%) > organic material applied (77%) > untreated soil (57%) > surfactant applied (34%) after 56 days. There was no clear link between removal of anthracene from soil and changes in the bacterial community structure. On the one hand, application of earthworms removed most of the contaminant from the arable soil and had a strong effect on the bacterial community structure, i.e. a decrease in the relative abundance of the Acidobacteria, Chloroflexi and Gemmatimonadetes, and an increase in that of the Proteobacteria compared to the unamended soil. Mixing the soil weekly removed all anthracene from the arable soil, but had little or no effect on the bacterial community structure. On the other hand, application of the surfactant inhibited the removal of anthracene from the arable soil compared to the untreated soil, but had a strong effect on the bacterial community structure, i.e. a decrease in the relative abundance of Cytophagia (Bacteroidetes), Chloroflexi, Gemmatimonadetes and Planctomycetes and an increase in that of the Flavobacteria (Bacteroidetes) and Proteobacteria. Additionally, the removal of anthracene was similar in the different treatments of both the arable and pasture soil, but the

Changes in the Bacterial Community Structure of Remediated Anthracene-Contaminated Soils.

Directory of Open Access Journals (Sweden)

Laura Delgado-Balbuena

Full Text Available Mixing soil or adding earthworms (Eisenia fetida (Savigny, 1826 accelerated the removal of anthracene, a polycyclic aromatic hydrocarbon, from a pasture and an arable soil, while a non-ionic surfactant (Surfynol® 485 inhibited the removal of the contaminant compared to the untreated soil. It was unclear if the treatments affected the soil bacterial community and consequently the removal of anthracene. Therefore, the bacterial community structure was monitored by means of 454 pyrosequencing of the 16S rRNA gene in the pasture and arable soil mixed weekly, amended with Surfynol® 485, E. fetida or organic material that served as food for the earthworms for 56 days. In both soils, the removal of anthracene was in the order: mixing soil weekly (100% > earthworms applied (92% > organic material applied (77% > untreated soil (57% > surfactant applied (34% after 56 days. There was no clear link between removal of anthracene from soil and changes in the bacterial community structure. On the one hand, application of earthworms removed most of the contaminant from the arable soil and had a strong effect on the bacterial community structure, i.e. a decrease in the relative abundance of the Acidobacteria, Chloroflexi and Gemmatimonadetes, and an increase in that of the Proteobacteria compared to the unamended soil. Mixing the soil weekly removed all anthracene from the arable soil, but had little or no effect on the bacterial community structure. On the other hand, application of the surfactant inhibited the removal of anthracene from the arable soil compared to the untreated soil, but had a strong effect on the bacterial community structure, i.e. a decrease in the relative abundance of Cytophagia (Bacteroidetes, Chloroflexi, Gemmatimonadetes and Planctomycetes and an increase in that of the Flavobacteria (Bacteroidetes and Proteobacteria. Additionally, the removal of anthracene was similar in the different treatments of both the arable and pasture soil

Contrasted structuring effects of mesoscale features on the seabird community in the Mozambique Channel

Science.gov (United States)

Jaquemet, S.; Ternon, J. F.; Kaehler, S.; Thiebot, J. B.; Dyer, B.; Bemanaja, E.; Marteau, C.; Le Corre, M.

2014-02-01

of mescoscale features in structuring the tropical seabird community in the Mozambique Channel, in addition to segregating tropical and non-tropical species. The mechanisms underlying the segregation of tropical seabirds seem to partially differ from that of other tropical regions, and this may be a consequence of the strong local mesoscale activity, affecting prey size and availability schemes. Beyond characterising the foraging habitats of the seabird community of the Mozambique Channel, this study highlights the importance of this region as a hot spot for seabirds; especially the southern part, where several endangered sub-Antarctic species over-winter.

Flood Losses Associated with Winter Storms in the U.S. Northeast

Science.gov (United States)

Ting, M.; Shimkus, C.

2015-12-01

Winter storms pose a number of hazards to coastal communities in the U.S. Northeast including heavy rain, snow, strong wind, cold temperatures, and flooding. These hazards can cause millions in property damages from one storm alone. This study addresses the impacts of winter storms from 2001 - 2012 on coastal counties in the U.S. Northeast and underscores the significant economic consequences extreme winter storms have on property. The analysis on the types of hazards (floods, strong wind, snow, etc.) and associated damage from the National Climatic Data Center Storm Events Database indicates that floods were responsible for the highest damages. This finding suggests that winter storm vulnerability could grow in the future as precipitation intensity increases and sea level rise exacerbate flood losses. Flood loss maps are constructed based on damage amount, which can be compared to the flood exposure maps constructed by the NOAA Office of Coastal Management. Interesting agreements and discrepancies exist between the two methods, which warrant further examination. Furthermore, flood losses often came from storms characterized as heavy precipitation storms and strong surge storms, and sometimes both, illustrating the compounding effect of flood risks in the region. While New Jersey counties experienced the most damage per unit area, there is no discernable connection between population density and damage amount, which suggests that societal impacts may rely less on population characteristics and more on infrastructure types and property values, which vary throughout the region.

Prevalence of operator fatigue in winter maintenance operations.

Science.gov (United States)

Camden, Matthew C; Medina-Flintsch, Alejandra; Hickman, Jeffrey S; Bryce, James; Flintsch, Gerardo; Hanowski, Richard J

2018-02-02

Similar to commercial motor vehicle drivers, winter maintenance operators are likely to be at an increased risk of becoming fatigued while driving due to long, inconsistent shifts, environmental stressors, and limited opportunities for sleep. Despite this risk, there is little research concerning the prevalence of winter maintenance operator fatigue during winter emergencies. The purpose of this research was to investigate the prevalence, sources, and countermeasures of fatigue in winter maintenance operations. Questionnaires from 1043 winter maintenance operators and 453 managers were received from 29 Clear Road member states. Results confirmed that fatigue was prevalent in winter maintenance operations. Over 70% of the operators and managers believed that fatigue has a moderate to significant impact on winter maintenance operations. Approximately 75% of winter maintenance operators reported to at least sometimes drive while fatigued, and 96% of managers believed their winter maintenance operators drove while fatigued at least some of the time. Furthermore, winter maintenance operators and managers identified fatigue countermeasures and sources of fatigue related to winter maintenance equipment. However, the countermeasures believed to be the most effective at reducing fatigue during winter emergencies (i.e., naps) were underutilized. For example, winter maintenance operators reported to never use naps to eliminate fatigue. These results indicated winter maintenance operations are impacted by operator fatigue. These results support the increased need for research and effective countermeasures targeting winter maintenance operator fatigue. Copyright © 2018 Elsevier Ltd. All rights reserved.

The ability of winter grazing to reduce wildfire size, intensity ...

Science.gov (United States)

A recent study by Davies et al. sought to test whether winter grazing could reduce wildfire size, fire behavior metrics, and fire-induced plant mortality in shrub-grasslands. The authors concluded that ungrazed rangelands may experience more fire-induced mortality of native perennial bunchgrasses. The authors also presented several statements regarding the benefits of winter grazing on post-fire plant community responses. However, this commentary will show that the study by Davies et al. has underlying methodological flaws, lacks data necessary to support their conclusions, and does not provide an accurate discussion on the effect of grazing on rangeland ecosystems. Importantly, Davies et al. presented no data on the post-fire mortality of the perennial bunchgrasses or on the changes in plant community composition following their experimental fires. Rather, Davies et al. inferred these conclusions based off their observed fire behavior metrics of maximum temperature and a term described as the “heat load”. However, neither metric is appropriate for elucidating the heat flux impacts on plants. This lack of post-fire data, several methodological flaws, and the use of inadequate metrics describing heat cast doubts on the authors’ ability to support their stated conclusions. This article is a commentary highlights the scientific shortcomings in a forthcoming paper by Davies et al. in the International Journal of Wildland Fire. The study has methodological flaw

Macroinvertebrate community change associated with the severity of streamflow alteration

Science.gov (United States)

Carlisle, Daren M.; Eng, Kenny; Nelson, S.M.

2014-01-01

Natural streamflows play a critical role in stream ecosystems, yet quantitative relations between streamflow alteration and stream health have been elusive. One reason for this difficulty is that neither streamflow alteration nor ecological responses are measured relative to their natural expectations. We assessed macroinvertebrate community condition in 25 mountain streams representing a large gradient of streamflow alteration, which we quantified as the departure of observed flows from natural expectations. Observed flows were obtained from US Geological Survey streamgaging stations and discharge records from dams and diversion structures. During low-flow conditions in September, samples of macroinvertebrate communities were collected at each site, in addition to measures of physical habitat, water chemistry and organic matter. In general, streamflows were artificially high during summer and artificially low throughout the rest of the year. Biological condition, as measured by richness of sensitive taxa (Ephemeroptera, Plecoptera and Trichoptera) and taxonomic completeness (O/E), was strongly and negatively related to the severity of depleted flows in winter. Analyses of macroinvertebrate traits suggest that taxa losses may have been caused by thermal modification associated with streamflow alteration. Our study yielded quantitative relations between the severity of streamflow alteration and the degree of biological impairment and suggests that water management that reduces streamflows during winter months is likely to have negative effects on downstream benthic communities in Utah mountain streams. 

Floral colour versus phylogeny in structuring subalpine flowering communities

OpenAIRE

McEwen, Jamie R.; Vamosi, Jana C.

2010-01-01

The relative number of seeds produced by competing species can influence the community structure; yet, traits that influence seed production, such as pollinator attraction and floral colour, have received little attention in community ecology. Here, we analyse floral colour using reflectance spectra that include near-UV and examined the phylogenetic signal of floral colour. We found that coflowering species within communities tended to be more divergent in floral colour than expected by chanc...

HOW ECOLOGICAL COMMUNITIES ARE STRUCTURED: A REVIEW ON ECOLOGICAL ASSEMBLY RULES

Directory of Open Access Journals (Sweden)

Gabriel Jaime Colorado Zuluaga

Full Text Available Whether biological communities are deterministic or stochastic assemblages of species has long been a central topic of ecology. The widely demonstrated presence of structural patterns in nature may imply the existence of rules that regulate the organization of ecological communities. In this review, I present a compilation of major assembly rules that fundament, in a great proportion, the community assembly theory. Initially, I present a general overview of key concepts associated to the assembly of communities, in particular the origin of assembly rules, definition, the problem of scale and underlying mechanisms in the structure of ecological communities. Subsequently, two major approaches or paradigms (i.e. species-based and trait-based for the assembly of communities are discussed. Finally, major tested assembly rules are explored and discussed under the light of available published literature.

[Fungal community structure in phase II composting of Volvariella volvacea].

Science.gov (United States)

Chen, Changqing; Li, Tong; Jiang, Yun; Li, Yu

2014-12-04

To understand the fungal community succession during the phase II of Volvariella volvacea compost and clarify the predominant fungi in different fermentation stages, to monitor the dynamic compost at the molecular level accurately and quickly, and reveal the mechanism. The 18S rDNA-denaturing gradient gel electrophoresis (DGGE) and sequencing methods were used to analyze the fungal community structure during the course of compost. The DGGE profile shows that there were differences in the diversity of fungal community with the fermentation progress. The diversity was higher in the stages of high temperature. And the dynamic changes of predominant community and relative intensity was observed. Among the 20 predominant clone strains, 9 were unknown eukaryote and fungi, the others were Eurotiales, Aspergillus sp., Melanocarpus albomyces, Colletotrichum sp., Rhizomucor sp., Verticillium sp., Penicillium commune, Microascus trigonosporus and Trichosporon lactis. The 14 clone strains were detected in the stages of high and durative temperature. The fungal community structure and predominant community have taken dynamic succession during the phase II of Volvariella volvacea compost.

Polar-Tropical Coupling in the Winter Stratosphere

Science.gov (United States)

Scott, R.

2017-12-01

A distinct pattern of enhanced equatorial potential vorticitygradients during QBO westerly anomalies, enhanced subtropicalgradients during QBO easterlies, is used to motivate a new formulationof dynamical coupling between the tropics and winter polar vortexbased on remote transfer of finite amplitude wave activity defined interms of lateral potential vorticity displacements. While the weakpotential vorticity gradients in the surf zone imply laterallyevanescent Rossby waves, transfer of wave activity from the polarvortex edge to the subtropical barrier or to the QBO westerly phaseequatorial gradients arises from nonlocality of potential vorticityinversion and the large horizontal displacements of the vortex edge.Our approach goes beyond the traditional description of the effect ofQBO wind anomalies on linear wave propagation through the stratospherevia wave reflection at the zero wind line; linear wave theory isappealing but neglects the long horizontal and vertical wavelengthsinvolved and the inhomogeneous background potential vorticity. Aparticular issue of outstanding interest is whether and how therelatively shallow QBO anomalies can influence the deep verticallypropagating waves on the edge of the winter stratospheric polarvortex. Process studies with a mechanistic model with prescribed QBOand carefully controlled high-latitude wave forcing are analyzed,guided by a reexamination of meteorological reanalysis, to address howsuch a dynamical linkage may influence in particular the resonantexcitation of the winter vortex, and the occurrence ofvortex-splitting sudden warming events. We quantify the associatedtransfer of wave activity from vortex edge to the tropics, considerunder what conditions this becomes a significant source of easterlymomentum in the driving of the QBO itself, and how the structure ofthe Brewer-Dobson circulation varies in response to the location ofthe QBO westerly winds in any given winter.

Colonisation and community structure of benthic diatoms on artificial ...

African Journals Online (AJOL)

This was undertaken using tiles as artificial substrates so that we could study how the communities developed after the flood disturbance. The diatom community structure was assessed over a 28-day period following a flood event in October 2012. The Mann Whitney test indicated that there was a statistically significant ...

Sampling from complex networks with high community structures.

Science.gov (United States)

Salehi, Mostafa; Rabiee, Hamid R; Rajabi, Arezo

2012-06-01

In this paper, we propose a novel link-tracing sampling algorithm, based on the concepts from PageRank vectors, to sample from networks with high community structures. Our method has two phases; (1) Sampling the closest nodes to the initial nodes by approximating personalized PageRank vectors and (2) Jumping to a new community by using PageRank vectors and unknown neighbors. Empirical studies on several synthetic and real-world networks show that the proposed method improves the performance of network sampling compared to the popular link-based sampling methods in terms of accuracy and visited communities.

Major role of microbes in carbon fluxes during Austral winter in the Southern Drake Passage.

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Maura Manganelli

Full Text Available Carbon cycling in Southern Ocean is a major issue in climate change, hence the need to understand the role of biota in the regulation of carbon fixation and cycling. Southern Ocean is a heterogeneous system, characterized by a strong seasonality, due to long dark winter. Yet, currently little is known about biogeochemical dynamics during this season, particularly in the deeper part of the ocean. We studied bacterial communities and processes in summer and winter cruises in the southern Drake Passage. Here we show that in winter, when the primary production is greatly reduced, Bacteria and Archaea become the major producers of biogenic particles, at the expense of dissolved organic carbon drawdown. Heterotrophic production and chemoautotrophic CO(2 fixation rates were substantial, also in deep water, and bacterial populations were controlled by protists and viruses. A dynamic food web is also consistent with the observed temporal and spatial variations in archaeal and bacterial communities that might exploit various niches. Thus, Southern Ocean microbial loop may substantially maintain a wintertime food web and system respiration at the expense of summer produced DOC as well as regenerate nutrients and iron. Our findings have important implications for Southern Ocean ecosystem functioning and carbon cycle and its manipulation by iron enrichment to achieve net sequestration of atmospheric CO(2.

Seasonality of community structure and carbon flow in Narragansett Bay sediments

International Nuclear Information System (INIS)

Rudnick, D.T.

1984-01-01

Seasonal patterns of benthic community dynamics and the pathways of detrital decomposition in Narragansett Bay were examined. Benthic meiofauna and macrofauna exhibited a pronounced seasonality, with peak abundances in the late spring and minima in the late summer. This pattern was most pronounced for surface dwelling fauna, particularly harpacticoid copepods. These results were attributed to the seasonality of detrital inputs to the sediment and the fate of these inputs. A six month study in which 14 C-sodium bicarbonate was added to a large (13 m 3 ) microcosm enabled the author to observe pathways of carbon flow. Half of the labeled organic carbon that was deposited on the sediment during the winter and spring was found in the sediment in July. At least 20 gC/m 2 had accumulated since December. Within the sediment, the existence of two discrete food webs was distinguished by measurement of faunal specific activity. Surface fauna, dominated by the meiofauna, exclusively assimilate fresh (labeled) organics, while subsurface fauna (meiofauna and macrofauna) predominantly assimilated older, non-labeled organics for the duration of the study. Only the subsurface food web had access to the storage of buried detritus. While there was a surplus of detritus for both food webs during the winter and spring, the authors expect that benthic respiration rates exceed organic deposition rates during the summer. Detrital storage may be critical for the survival of the fauna through the summer

Community structure and diversity of macrobenthic invertebrates in ...

African Journals Online (AJOL)

Macrobenthic invertebrates' community structure and diversity in relation to ... Analysis of variance (ANOVA) revealed that there were significant difference ... invertebrates' species distribution and some measured environmental variables.

[Microbial Community Structure on the Root Surface of Patients with Periodontitis.

Science.gov (United States)

Zhang, Ju-Mei; Zhou, Jian-Ye; Bo, Lei; Hu, Xiao-Pan; Jiao, Kang-Li; Li, Zhi-Jie; Li, Yue-Hong; Li, Zhi-Qiang

2016-11-01

To study the microbial community structure on the root surface of patients with periodontitis. Bacterial plaque and tissues from the root neck (RN group),root middle (RM group) and root tine (RT group) of six teeth with mobility 3 in one patient with periodontitis were sampled.The V3V4 region of 16S rRNA was sequenced on the Illumina MiSeq platform.The microbial community structure was analyzed by Mothur,Qiime and SPSS software. The principal component analysis (PCoA) results indicated that the RM samples had a similar microbial community structure as that of the RT samples,which was significant different from that of the RN samples.Thirteen phyla were detected in the three groups of samples,which included 7 dominant phyla.29 dominant genera were detected in 184 genera.The abundance of Bacteroidetes _[G-6] and Peptostre ptococcaceae _[XI][G-4] had a positive correlation with the depth of the collection site of samples ( P microbial community structure on the root surface of patients with periodontitis.

2010 winter games tracks energy in real time

Energy Technology Data Exchange (ETDEWEB)

Anon.

2010-01-15

An online energy tracker was developed by BC Hydro to publicly monitor the real-time energy consumption at the Vancouver 2010 Olympic winter game sites within Vancouver, Richmond, Whistler and Whistler Blackcomb. The venues and associated sites participating in the live energy tracking project were the Richmond Olympic Oval, Canada Hockey Place, Vancouver Olympic/Paralympic Centre, South East False Creek Community Centre, Whistler Blackcomb Roundhouse Lodge and snowmaking facilities, and the Olympic and Paralympic Villages. The system was developed to allow venue managers to optimize their use of electricity on an hourly and daily basis. An energy tracking display board developed by Pulse Energy enabled them to compare their performance to similar facilities in real time, and to determine the greenhouse gas savings achieved as result of building and operating practices. Some venues had the potential to save as much as 15 to 20 per cent in energy costs with corresponding reductions in carbon emissions. Efficiency and conservation was built into the design of many new venues. The retrofits made to several existing buildings will continue to contribute to British Columbia's conservation goals long after the 2010 winter games are over.

Strong influence of regional species pools on continent-wide structuring of local communities

DEFF Research Database (Denmark)

Lessard, Jean-Philippe; Borregaard, Michael Krabbe; Fordyce, James A.

2012-01-01

pool, to examine the interplay between broad-scale evolutionary and fine-scale ecological processes. Finally, a renewed interest in the influence of species source pools on communities has shown that the definition of the source pool influences interpretations of patterns of community structure. We use...... of communities along climatic gradients. We find that the average phylogenetic relatedness of species in ant communities decreases from tropical to temperate regions, but the strength of this relationship depends on the level of ecological realism in the definition of source pools. We conclude that the evolution...... of climatic niches influences the phylogenetic structure of regional source pools and that the influence of regional source pools on local community structure is strong....

Foraging flight distances of wintering ducks and geese: a review

Directory of Open Access Journals (Sweden)

William P. Johnson

2014-12-01

Full Text Available The distance covered by foraging animals, especially those that radiate from a central area when foraging, may affect ecosystem, community, and population dynamics, and has conservation and landscape planning implications for multiple taxa, including migratory waterfowl. Migrating and wintering waterfowl make regular foraging flights between roosting and feeding areas that can greatly impact energetic resources within the foraging zone near roost sites. We reviewed published studies and gray literature for one-way foraging flight distances (FFDs of migrating and wintering dabbling ducks and geese. Thirty reviewed studies reported FFDs and several reported values for multiple species or locations. We obtained FFD values for migration (n = 7 and winter (n = 70. We evaluated the effects of body mass, guild, i.e., dabbling duck or goose, and location, i.e., Nearctic or Palearctic, on FFDs. We used the second-order Akaike's Information Criterion for model selection. We found support for effects of location and guild on FFDs. FFDs of waterfowl wintering in the Nearctic (7.4 ± 6.7 km, mean ± SD; n = 39 values were longer than in the Palearctic (4.2 ± 3.2 km; n = 31 values. The FFDs of geese (7.8 ± 7.2 km, mean ± SD; n = 24 values were longer than FFDs of dabbling ducks (5.1 ± 4.4 km, mean ± SD; n = 46 values. We found mixed evidence that distance flown from the roost changed, i.e., increased or decreased, seasonally. Our results can be used to refine estimates of energetic carrying capacity around roosts and in biological and landscape planning efforts.

46 CFR 45.73 - Winter freeboard.

Science.gov (United States)

2010-10-01

... 46 Shipping 2 2010-10-01 2010-10-01 false Winter freeboard. 45.73 Section 45.73 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) LOAD LINES GREAT LAKES LOAD LINES Freeboards § 45.73 Winter freeboard. The minimum winter freeboard (fw) in inches is obtained by the formula: fw=f(s)+T s...

Fishing degrades size structure of coral reef fish communities.

Science.gov (United States)

Robinson, James P W; Williams, Ivor D; Edwards, Andrew M; McPherson, Jana; Yeager, Lauren; Vigliola, Laurent; Brainard, Russell E; Baum, Julia K

2017-03-01

Fishing pressure on coral reef ecosystems has been frequently linked to reductions of large fishes and reef fish biomass. Associated impacts on overall community structure are, however, less clear. In size-structured aquatic ecosystems, fishing impacts are commonly quantified using size spectra, which describe the distribution of individual body sizes within a community. We examined the size spectra and biomass of coral reef fish communities at 38 US-affiliated Pacific islands that ranged in human presence from near pristine to human population centers. Size spectra 'steepened' steadily with increasing human population and proximity to market due to a reduction in the relative biomass of large fishes and an increase in the dominance of small fishes. Reef fish biomass was substantially lower on inhabited islands than uninhabited ones, even at inhabited islands with the lowest levels of human presence. We found that on populated islands size spectra exponents decreased (analogous to size spectra steepening) linearly with declining biomass, whereas on uninhabited islands there was no relationship. Size spectra were steeper in regions of low sea surface temperature but were insensitive to variation in other environmental and geomorphic covariates. In contrast, reef fish biomass was highly sensitive to oceanographic conditions, being influenced by both oceanic productivity and sea surface temperature. Our results suggest that community size structure may be a more robust indicator than fish biomass to increasing human presence and that size spectra are reliable indicators of exploitation impacts across regions of different fish community compositions, environmental drivers, and fisheries types. Size-based approaches that link directly to functional properties of fish communities, and are relatively insensitive to abiotic variation across biogeographic regions, offer great potential for developing our understanding of fishing impacts in coral reef ecosystems. © 2016

[Fish community structure and its seasonal change in subtidal sandy beach habitat off southern Gouqi Island].

Science.gov (United States)

Wang, Zhen-Hua; Wang, Kai; Zhao, Jing; Zhang, Shou-Yu

2011-05-01

To understand the characteristics of fish community structure in sandy beach habitats of island reef water areas, and to evaluate the potential capacity of these habitats in local fish stock maintenance, fishes were monthly collected with multi-mesh trammel nets in 2009 from the subtidal sandy beach habitat off southern Gouqi Island, taking the adjacent rocky reef habitat as the control. alpha and beta species diversity indices, index of relative importance (IRI), relative catch rate, and dominance curve for abundance and biomass (ABC curve) were adopted to compare the fish species composition, diversity, and community pattern between the two habitats, and multivariate statistical analyses such as non-metric multidimensional scaling (nMDS) and cluster were conducted to discuss the fish assemblage patterns. A total of 63 fish species belonging to 11 orders, 38 families, and 56 genera were collected, of which, 46 fish species were appeared in the two habitats. Due to the appearance of more warm water species in sandy bottom, the fishes in subtidal sandy beach habitat showed much higher richness, and the abundance catch rate (ACR) from May to July was higher than that in rocky reef habitat. In most rest months, the ACR in subtidal sandy beach habitat also showed the similar trend. However, the species richness and diversity in spring and summer were significantly lower in subtidal sandy beach habitat than in rocky reef habitat, because of the high species dominance and low evenness in the sandy beach habitat. Japanese tonguefish (Paraplagusia japonica) was the indicator species in the sandy beach habitat, and dominated in early spring, later summer, autumn, and winter when the fishing pressure was not strong. In sandy bottom, a unique community structure was formed and kept in dynamic, due to the nursery use of sandy beach by Japanese anchovy (Engraulis japonicus) from May to July, the gathering of gray mullet (Mugil cephalus) in most months for feeding, and the large

Multi-scale structural community organisation of the human genome.

Science.gov (United States)

Boulos, Rasha E; Tremblay, Nicolas; Arneodo, Alain; Borgnat, Pierre; Audit, Benjamin

2017-04-11

Structural interaction frequency matrices between all genome loci are now experimentally achievable thanks to high-throughput chromosome conformation capture technologies. This ensues a new methodological challenge for computational biology which consists in objectively extracting from these data the structural motifs characteristic of genome organisation. We deployed the fast multi-scale community mining algorithm based on spectral graph wavelets to characterise the networks of intra-chromosomal interactions in human cell lines. We observed that there exist structural domains of all sizes up to chromosome length and demonstrated that the set of structural communities forms a hierarchy of chromosome segments. Hence, at all scales, chromosome folding predominantly involves interactions between neighbouring sites rather than the formation of links between distant loci. Multi-scale structural decomposition of human chromosomes provides an original framework to question structural organisation and its relationship to functional regulation across the scales. By construction the proposed methodology is independent of the precise assembly of the reference genome and is thus directly applicable to genomes whose assembly is not fully determined.

High taxonomic variability despite stable functional structure across microbial communities.

Science.gov (United States)

Louca, Stilianos; Jacques, Saulo M S; Pires, Aliny P F; Leal, Juliana S; Srivastava, Diane S; Parfrey, Laura Wegener; Farjalla, Vinicius F; Doebeli, Michael

2016-12-05

Understanding the processes that are driving variation of natural microbial communities across space or time is a major challenge for ecologists. Environmental conditions strongly shape the metabolic function of microbial communities; however, other processes such as biotic interactions, random demographic drift or dispersal limitation may also influence community dynamics. The relative importance of these processes and their effects on community function remain largely unknown. To address this uncertainty, here we examined bacterial and archaeal communities in replicate 'miniature' aquatic ecosystems contained within the foliage of wild bromeliads. We used marker gene sequencing to infer the taxonomic composition within nine metabolic functional groups, and shotgun environmental DNA sequencing to estimate the relative abundances of these groups. We found that all of the bromeliads exhibited remarkably similar functional community structures, but that the taxonomic composition within individual functional groups was highly variable. Furthermore, using statistical analyses, we found that non-neutral processes, including environmental filtering and potentially biotic interactions, at least partly shaped the composition within functional groups and were more important than spatial dispersal limitation and demographic drift. Hence both the functional structure and taxonomic composition within functional groups of natural microbial communities may be shaped by non-neutral and roughly separate processes.

Matrix composition and community structure analysis of a novel bacterial pyrite leaching community.

Science.gov (United States)

Ziegler, Sibylle; Ackermann, Sonia; Majzlan, Juraj; Gescher, Johannes

2009-09-01

Here we describe a novel bacterial community that is embedded in a matrix of carbohydrates and bio/geochemical products of pyrite (FeS(2)) oxidation. This community grows in stalactite-like structures--snottites--on the ceiling of an abandoned pyrite mine at pH values of 2.2-2.6. The aqueous phase in the matrix contains 200 mM of sulfate and total iron concentrations of 60 mM. Micro-X-ray diffraction analysis showed that jarosite [(K,Na,H(3)O)Fe(3)(SO(4))(2)(OH)(6)] is the major mineral embedded in the snottites. X-ray absorption near-edge structure experiments revealed three different sulfur species. The major signal can be ascribed to sulfate, and the other two features may correspond to thiols and sulfoxides. Arabinose was detected as the major sugar component in the extracellular polymeric substance. Via restriction fragment length polymorphism analysis, a community was found that mainly consists of iron oxidizing Leptospirillum and Ferrovum species but also of bacteria that could be involved in dissimilatory sulfate and dissimilatory iron reduction. Each snottite can be regarded as a complex, self-contained consortium of bacterial species fuelled by the decomposition of pyrite.

Polar mesosphere winter echoes during MaCWAVE

Directory of Open Access Journals (Sweden)

S. Kirkwood

2006-07-01

Full Text Available During the MaCWAVE winter campaign in January 2003, layers of enhanced echo power known as PMWE (Polar Mesosphere Winter Echoes were detected by the ESRAD 52 MHz radar on several occasions. The cause of these echoes is unclear and here we use observations by meteorological and sounding rockets and by lidar to test whether neutral turbulence or aerosol layers might be responsible. PMWE were detected within 30 min of meteorological rocket soundings (falling spheres on 5 separate days. The observations from the meteorological rockets show that, in most cases, conditions likely to be associated with neutral atmospheric turbulence are not observed at the heights of the PMWE. Observations by instrumented sounding rockets confirm low levels of turbulence and indicate considerable small-scale structure in charge density profiles. Comparison of falling sphere and lidar data, on the other hand, show that any contribution of aerosol scatter to the lidar signal at PMWE heights is less than the detection threshold of about 10%.

Short Term CO2 Enrichment Increases Carbon Sequestration of Air-Exposed Intertidal Communities of a Coastal Lagoon

Directory of Open Access Journals (Sweden)

Amrit K. Mishra

2018-01-01

Full Text Available In situ production responses of air-exposed intertidal communities under CO2 enrichment are reported here for the first time. We assessed the short-term effects of CO2 on the light responses of the net community production (NCP and community respiration (CR of intertidal Z. noltei and unvegetated sediment communities of Ria Formosa lagoon, when exposed to air. NCP and CR were measured in situ in summer and winter, under present and CO2 enriched conditions using benthic chambers. Within chamber CO2 evolution measurements were carried out by a series of short-term incubations (30 min using an infra-red gas analyser. Liner regression models fitted to the NCP-irradiance responses were used to estimate the seasonal budgets of air-exposed, intertidal production as determined by the daily and seasonal variation of incident photosynthetic active radiation. High CO2 resulted in higher CO2 sequestration by both communities in both summer and winter seasons. Lower respiration rates of both communities under high CO2 further contributed to a potential negative climate feedback, except in winter when the CR of sediment community was higher. The light compensation points (LCP (light intensity where production equals respiration of Z. noltei and sediment communities also decreased under CO2 enriched conditions in both seasons. The seasonal community production of Z. noltei was 115.54 ± 7.58 g C m−2 season−1 in summer and 29.45 ± 4.04 g C m−2 season−1 in winter and of unvegetated sediment was 91.28 ± 6.32 g C m−2 season−1 in summer and 25.83 ± 4.01 g C m−2 season−1 in winter under CO2 enriched conditions. Future CO2 conditions may increase air-exposed seagrass production by about 1.5-fold and unvegetated sediments by about 1.2-fold.

The Relationship Between Low-Frequency Motions and Community Structure of Residue Network in Protein Molecules.

Science.gov (United States)

Sun, Weitao

2018-01-01

The global shape of a protein molecule is believed to be dominant in determining low-frequency deformational motions. However, how structure dynamics relies on residue interactions remains largely unknown. The global residue community structure and the local residue interactions are two important coexisting factors imposing significant effects on low-frequency normal modes. In this work, an algorithm for community structure partition is proposed by integrating Miyazawa-Jernigan empirical potential energy as edge weight. A sensitivity parameter is defined to measure the effect of local residue interaction on low-frequency movement. We show that community structure is a more fundamental feature of residue contact networks. Moreover, we surprisingly find that low-frequency normal mode eigenvectors are sensitive to some local critical residue interaction pairs (CRIPs). A fair amount of CRIPs act as bridges and hold distributed structure components into a unified tertiary structure by bonding nearby communities. Community structure analysis and CRIP detection of 116 catalytic proteins reveal that breaking up of a CRIP can cause low-frequency allosteric movement of a residue at the far side of protein structure. The results imply that community structure and CRIP may be the structural basis for low-frequency motions.

Burning fire-prone Mediterranean shrublands: immediate changes in soil microbial community structure and ecosystem functions.

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Goberna, M; García, C; Insam, H; Hernández, M T; Verdú, M

2012-07-01

Wildfires subject soil microbes to extreme temperatures and modify their physical and chemical habitat. This might immediately alter their community structure and ecosystem functions. We burned a fire-prone shrubland under controlled conditions to investigate (1) the fire-induced changes in the community structure of soil archaea, bacteria and fungi by analysing 16S or 18S rRNA gene amplicons separated through denaturing gradient gel electrophoresis; (2) the physical and chemical variables determining the immediate shifts in the microbial community structure; and (3) the microbial drivers of the change in ecosystem functions related to biogeochemical cycling. Prokaryotes and eukaryotes were structured by the local environment in pre-fire soils. Fire caused a significant shift in the microbial community structure, biomass C, respiration and soil hydrolases. One-day changes in bacterial and fungal community structure correlated to the rise in total organic C and NO(3)(-)-N caused by the combustion of plant residues. In the following week, bacterial communities shifted further forced by desiccation and increasing concentrations of macronutrients. Shifts in archaeal community structure were unrelated to any of the 18 environmental variables measured. Fire-induced changes in the community structure of bacteria, rather than archaea or fungi, were correlated to the enhanced microbial biomass, CO(2) production and hydrolysis of C and P organics. This is the first report on the combined effects of fire on the three biological domains in soils. We concluded that immediately after fire the biogeochemical cycling in Mediterranean shrublands becomes less conservative through the increased microbial biomass, activity and changes in the bacterial community structure.

Meteorological factors had more impact on airborne bacterial communities than air pollutants.

Science.gov (United States)

Zhen, Quan; Deng, Ye; Wang, Yaqing; Wang, Xiaoke; Zhang, Hongxing; Sun, Xu; Ouyang, Zhiyun

2017-12-01

Airborne bacteria have gained increasing attention because they affect ecological balance and pose potential risks on human health. Recently, some studies have focused on the abundance and composition of airborne bacteria under heavy, hazy polluted weather in China, but they reached different conclusions about the comparisons with non-polluted days. In this study, we tested the hypothesis that meteorological factors could have a higher impact on shaping airborne bacterial communities than air pollutants by systematically monitoring the communities for 1year. Total suspended particles in Beijing were sampled for 20 consecutive days in each season of 2015. Bacterial abundance varied from 8.71×10 3 to 2.14×10 7 ribosomal operons per cubic meter according to the quantitative PCR analysis. There were relatively higher bacterial counts in spring and in autumn than in winter and summer. Airborne bacterial communities displayed a strong seasonality, according to the hierarchical cluster analysis. Only two exceptions overtook the seasonal trend, and both occurred in or after violent meteorological changes (sandstorm or rain). Aggregated boosted tree analysis performed on bacterial abundance showed that the dominant factors shaping bacterial communities were meteorological. They were air pressure in winter, air temperature and relative humidity in spring, RH in summer, and vapor pressure in autumn. Variation partition analysis on community structure showed that meteorological factors explained more variations than air pollutants. Therefore, both of the two models verified our hypothesis that the differences in airborne bacterial communities in polluted days or non-polluted days were mainly driven by the discrepancies of meteorological factors rather than by the presence of air pollutants. Copyright © 2017 Elsevier B.V. All rights reserved.

Yield response of winter wheat cultivars to environments modeled by different variance-covariance structures in linear mixed models

Energy Technology Data Exchange (ETDEWEB)

Studnicki, M.; Mądry, W.; Noras, K.; Wójcik-Gront, E.; Gacek, E.

2016-11-01

The main objectives of multi-environmental trials (METs) are to assess cultivar adaptation patterns under different environmental conditions and to investigate genotype by environment (G×E) interactions. Linear mixed models (LMMs) with more complex variance-covariance structures have become recognized and widely used for analyzing METs data. Best practice in METs analysis is to carry out a comparison of competing models with different variance-covariance structures. Improperly chosen variance-covariance structures may lead to biased estimation of means resulting in incorrect conclusions. In this work we focused on adaptive response of cultivars on the environments modeled by the LMMs with different variance-covariance structures. We identified possible limitations of inference when using an inadequate variance-covariance structure. In the presented study we used the dataset on grain yield for 63 winter wheat cultivars, evaluated across 18 locations, during three growing seasons (2008/2009-2010/2011) from the Polish Post-registration Variety Testing System. For the evaluation of variance-covariance structures and the description of cultivars adaptation to environments, we calculated adjusted means for the combination of cultivar and location in models with different variance-covariance structures. We concluded that in order to fully describe cultivars adaptive patterns modelers should use the unrestricted variance-covariance structure. The restricted compound symmetry structure may interfere with proper interpretation of cultivars adaptive patterns. We found, that the factor-analytic structure is also a good tool to describe cultivars reaction on environments, and it can be successfully used in METs data after determining the optimal component number for each dataset. (Author)

Winter warming from large volcanic eruptions

Science.gov (United States)

Robock, Alan; Mao, Jianping

1992-01-01

An examination of the Northern Hemisphere winter surface temperature patterns after the 12 largest volcanic eruptions from 1883-1992 shows warming over Eurasia and North America and cooling over the Middle East which are significant at the 95-percent level. This pattern is found in the first winter after tropical eruptions, in the first or second winter after midlatitude eruptions, and in the second winter after high latitude eruptions. The effects are independent of the hemisphere of the volcanoes. An enhanced zonal wind driven by heating of the tropical stratosphere by the volcanic aerosols is responsible for the regions of warming, while the cooling is caused by blocking of incoming sunlight.

Are gay communities dying or just in transition? Results from an international consultation examining possible structural change in gay communities.

Science.gov (United States)

Simon Rosser, B R; West, William; Weinmeyer, Richard

2008-05-01

This study sought to identify how urban gay communities are undergoing structural change, reasons for that change, and implications for HIV prevention planning. Key informants (N=29) at the AIDS Impact Conference from 17 cities in 14 countries completed surveys and participated in a facilitated structured dialog about if gay communities are changing, and if so, how they are changing. In all cities, the virtual gay community was identified as currently larger than the offline physical community. Most cities identified that while the gay population in their cities appeared stable or growing, the gay community appeared in decline. Measures included greater integration of heterosexuals into historically gay-identified neighborhoods and movement of gay persons into suburbs, decreased number of gay bars/clubs, less attendance at gay events, less volunteerism in gay or HIV/AIDS organizations, and the overall declining visibility of gay communities. Participants attributed structural change to multiple factors including gay neighborhood gentrification, achievement of civil rights, less discrimination, a vibrant virtual community, and changes in drug use. Consistent with social assimilation, gay infrastructure, visibility, and community identification appears to be decreasing across cities. HIV prevention planning, interventions, treatment services, and policies need to be re-conceptualized for MSM in the future. Four recommendations for future HIV prevention and research are detailed.

Spectral methods for the detection of network community structure: a comparative analysis

International Nuclear Information System (INIS)

Shen, Hua-Wei; Cheng, Xue-Qi

2010-01-01

Spectral analysis has been successfully applied to the detection of community structure of networks, respectively being based on the adjacency matrix, the standard Laplacian matrix, the normalized Laplacian matrix, the modularity matrix, the correlation matrix and several other variants of these matrices. However, the comparison between these spectral methods is less reported. More importantly, it is still unclear which matrix is more appropriate for the detection of community structure. This paper answers the question by evaluating the effectiveness of these five matrices against benchmark networks with heterogeneous distributions of node degree and community size. Test results demonstrate that the normalized Laplacian matrix and the correlation matrix significantly outperform the other three matrices at identifying the community structure of networks. This indicates that it is crucial to take into account the heterogeneous distribution of node degree when using spectral analysis for the detection of community structure. In addition, to our surprise, the modularity matrix exhibits very similar performance to the adjacency matrix, which indicates that the modularity matrix does not gain benefits from using the configuration model as a reference network with the consideration of the node degree heterogeneity

Exponential random graph models for networks with community structure.

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Fronczak, Piotr; Fronczak, Agata; Bujok, Maksymilian

2013-09-01

Although the community structure organization is an important characteristic of real-world networks, most of the traditional network models fail to reproduce the feature. Therefore, the models are useless as benchmark graphs for testing community detection algorithms. They are also inadequate to predict various properties of real networks. With this paper we intend to fill the gap. We develop an exponential random graph approach to networks with community structure. To this end we mainly built upon the idea of blockmodels. We consider both the classical blockmodel and its degree-corrected counterpart and study many of their properties analytically. We show that in the degree-corrected blockmodel, node degrees display an interesting scaling property, which is reminiscent of what is observed in real-world fractal networks. A short description of Monte Carlo simulations of the models is also given in the hope of being useful to others working in the field.

Constraints on trait combinations explain climatic drivers of biodiversity: the importance of trait covariance in community assembly.

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Dwyer, John M; Laughlin, Daniel C

2017-07-01

Trade-offs maintain diversity and structure communities along environmental gradients. Theory indicates that if covariance among functional traits sets a limit on the number of viable trait combinations in a given environment, then communities with strong multidimensional trait constraints should exhibit low species diversity. We tested this prediction in winter annual plant assemblages along an aridity gradient using multilevel structural equation modelling. Univariate and multivariate functional diversity measures were poorly explained by aridity, and were surprisingly poor predictors of community richness. By contrast, the covariance between maximum height and seed mass strengthened along the aridity gradient, and was strongly associated with richness declines. Community richness had a positive effect on local neighbourhood richness, indicating that climate effects on trait covariance indirectly influence diversity at local scales. We present clear empirical evidence that declines in species richness along gradients of environmental stress can be due to increasing constraints on multidimensional phenotypes. © 2017 John Wiley & Sons Ltd/CNRS.

Species composition and structure of a photophilic algal community dominated by Halopteris scoparia (L. Sauvageau from the North-Western Mediterranean

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Ballesteros, Enric

1993-12-01

Full Text Available A photophilic agal community dominated by Halopteris scoparia and other brown algae is described from sheltered environments from the North-Western Mediterranean rocky bottoms. This community is included in the Padino-Cladostephetum hirsutae previously described by FELDMANN(1937 for the same geographical area. This plant association is characterized by the lack of an upper erect stratum of Fucales and by the low degree of presence of thermophilic species which typify other similar communities described from other Mediterranean areas. Algal biomass ranges from 1100 to 2500 g dw m^-2 and coverage percentage ranges from 250 to 450 %. The great miniaturization and the extraordinary diversity and species richness of Mediterranean photophilic algal communities is assessed. Although there is not a clear seasonal change in biomass of the dominant species in the community, two structural stages can be discerned along an annual cycle: a developed community (summer and a diversified community (winter. Finally, the community structure and the environmental factors that impinge upon it are compared with those found in other Mediterranean phytobenthic communities.

Se describe una comunidad de algas fotófilas mediterráneas de modo calmado dominada por Hatopteris scoparia y otros feófitos de porte mediano, la cual se adscribe a la asociación Padino-Clodostephetum hirsutae J. Feldmann 1937. Dicha asociación se caracteriza por la ausencia de un estrato elevado de Fucales y el escaso grado de presencia de especies termófilas propia de comunidades similares descritas de otras zonas del Mediterráneo. La biomasa algal oscila entre 1100 y 2500 g ps m^-2 mientras que el porcentaje de recubrimiento varía entre el 250 y el 450%. Se pone de manifiesto la gran miniaturización de las comunidades de algas fotólitas mediterráneas y su extraordinaria diversidad y riqueza especificas. Pese a no existir un claro

Structure of Fungal Communities in Sub-Irrigated Agricultural Soil from Cerrado Floodplains

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Elainy Cristina A. M. Oliveira

2016-05-01

Full Text Available This study aimed to evaluate the influence of soybean cultivation on the fungal community structure in a tropical floodplain area. Soil samples were collected from two different soybean cropland sites and a control area under native vegetation. The soil samples were collected at a depth of 0–10 cm soil during the off-season in July 2013. The genetic structure of the soil fungal microbial community was analyzed using the automated ribosomal intergenic spacer analysis (ARISA technique. Among the 26 phylotypes with abundance levels higher than 1% detected in the control area, five were also detected in the area cultivated for five years, and none of them was shared between the control area and the area cultivated for eight years. Analysis of similarity (ANOSIM revealed differences in fungal community structure between the control area and the soybean cropland sites, and also between the soybean cropland sites. ANOSIM results were confirmed by multivariate statistics, which additionally revealed a nutrient-dependent relation for the fungal community structure in agricultural soil managed for eight consecutive years. The results indicated that land use affects soil chemical properties and richness and structure of the soil fungal microbial community in a tropical floodplain agricultural area, and the effects became more evident to the extent that soil was cultivated for soybean for more time.

Land use intensity controls actinobacterial community structure

Czech Academy of Sciences Publication Activity Database

Hill, P.; Krištůfek, Václav; Dijkhuizen, L.; Boddy, Ch.; Kroetsch, D.; van Elsas, J.D.

2011-01-01

Roč. 61, č. 2 (2011), s. 286-302 ISSN 0095-3628 R&D Projects: GA MŠk LC06066; GA MŠk 2B06154 Institutional research plan: CEZ:AV0Z60660521 Keywords : actinobacterial community structure * DNA * soils Subject RIV: EH - Ecology, Behaviour Impact factor: 2.912, year: 2011

Micro-Food Web Structure Shapes Rhizosphere Microbial Communities and Growth in Oak

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Hazel R. Maboreke

2018-03-01

Full Text Available The multitrophic interactions in the rhizosphere impose significant impacts on microbial community structure and function, affecting nutrient mineralisation and consequently plant performance. However, particularly for long-lived plants such as forest trees, the mechanisms by which trophic structure of the micro-food web governs rhizosphere microorganisms are still poorly understood. This study addresses the role of nematodes, as a major component of the soil micro-food web, in influencing the microbial abundance and community structure as well as tree growth. In a greenhouse experiment with Pedunculate Oak seedlings were grown in soil, where the nematode trophic structure was manipulated by altering the proportion of functional groups (i.e., bacterial, fungal, and plant feeders in a full factorial design. The influence on the rhizosphere microbial community, the ectomycorrhizal symbiont Piloderma croceum, and oak growth, was assessed. Soil phospholipid fatty acids were employed to determine changes in the microbial communities. Increased density of singular nematode functional groups showed minor impact by increasing the biomass of single microbial groups (e.g., plant feeders that of Gram-negative bacteria, except fungal feeders, which resulted in a decline of all microorganisms in the soil. In contrast, inoculation of two or three nematode groups promoted microbial biomass and altered the community structure in favour of bacteria, thereby counteracting negative impact of single groups. These findings highlight that the collective action of trophic groups in the soil micro-food web can result in microbial community changes promoting the fitness of the tree, thereby alleviating the negative effects of individual functional groups.

THE EVOLUTION OF THE WINTER PARALYMPIC GAMES AND SPORTS

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Vasilios Giovanis

2015-03-01

Full Text Available Purpose: The aim of this research was to record and the evolution of the winter paralympic games and sports since 1976 until 2010. The history of the Winter Paralympic Games is relatively recent compared to that one of the Olympic Games. The first Games were held in 1976 in Ornskoldsvik, Sweden and the most recent, 38 years later in 2014, in Sochi, Russia. This article will examine the Winter Paralympic Games up until the ones in 2010 in Vancouver, Canada. During these years, there have been many changes in relation to the Games itself, the governing body of the Paralympic Movement, the sports’ facilities, the sports involved and sports’ categories. The motivation for writing this paper was the need to record and gather all of these items in one paper. Gathering information for the Winter Paralympic Games will be an important theoretical background. This information will create a database for the structure of the governing body of the Paralympic Games, for the organization of the Games [Local Organizing Committee (LOC, venues and equipment], for the evolution of the Winter Paralympic Sports and the categories of the athletes, as well as the evolution of the athletes’ and sports’ participation. Material : The research material that was used was mainly from the bibliography and records of the International Paralympic Committee (IPC, from the Official Post Games Reports and the Internet, while the research method that was used was descriptive. Moreover, the use of diagrams will depict the distribution of the participation of athletes and countries in each Games. Results : The participation of countries grew continuously and steadily from 16 to 44, during the years of 1976 to 2010 respectively. Regarding the athletes’ participation, starting in the first Games with 198 athletes, they reached the number of 502 in the 2010 Vancouver Winter Paralympic Games. The participation percentages of the athletes coming from Europe constituted the bulk

Soil Microbial Community Structure Evolution along Halophyte Succession in Bohai Bay Wetland

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Mingyang Cong

2014-01-01

Full Text Available It is urgent to recover Bohai Bay costal wetland ecosystem because of covering a large area of severe saline-alkali soil. To explore the relationship between halophyte herbaceous succession and microbial community structure, we chose four local communities which played an important role in improving soil microenvironment. We performed phospholipid fatty acid analysis, measured soil parameters, and evaluated shifts of microbial community structure. Results showed that microbial community structure changed significantly along succession and bacteria community was dominant. Total phospholipid fatty acid content increased in different successional stages but decreased with depth, with similar variations in bacterial and fungal biomass. Soil organic carbon and especially total nitrogen were positively correlated with microbial biomass. Colonization of pioneering salt-tolerant plants Suaeda glauca in saline-alkali bare land changed total soil microorganism content and composition. These results showed that belowground processes were strongly related with aboveground halophyte succession. Fungal/bacterial ratio, Gram-negative/Gram-positive bacteria ratio, total microbial biomass, and fungi and bacteria content could indicate the degree of succession stages in Bohai Bay wetland ecosystem. And also these findings demonstrated that microbial community biomass and composition evolved along with vegetation succession environmental variables.

Changes in microbial community structure in the wake of Hurricanes Katrina and Rita.

Science.gov (United States)

Amaral-Zettler, Linda A; Rocca, Jennifer D; Lamontagne, Michael G; Dennett, Mark R; Gast, Rebecca J

2008-12-15

Hurricanes have the potential to alter the structures of coastal ecosystems and generate pathogen-laden floodwaters thatthreaten public health. To examine the impact of hurricanes on urban systems, we compared microbial community structures in samples collected after Hurricane Katrina and before and after Hurricane Rita. We extracted environmental DNA and sequenced small-subunit rRNA (SSU rRNA) gene clone libraries to survey microbial communities in floodwater, water, and sediment samples collected from Lake Charles, Lake Pontchartrain, the 17th Street and Industrial Canals in New Orleans, and raw sewage. Correspondence analysis showed that microbial communities associated with sediments formed one cluster while communities associated with lake and Industrial Canal water formed a second. Communities associated with water from the 17th Street Canal and floodwaters collected in New Orleans showed similarity to communities in raw sewage and contained a number of sequences associated with possible pathogenic microbes. This suggests that a distinct microbial community developed in floodwaters following Hurricane Katrina and that microbial community structures as a whole might be sensitive indicators of ecosystem health and serve as "sentinels" of water quality in the environment.

Winter fidelity and apparent survival of lesser snow goose populations in the Pacific flyway

Science.gov (United States)

Williams, C.K.; Samuel, M.D.; Baranyuk, Vasily V.; Cooch, E.G.; Kraege, Donald K.

2008-01-01

The Beringia region of the Arctic contains 2 colonies of lesser snow geese (Chen caerulescens caerulescens) breeding on Wrangel Island, Russia, and Banks Island, Canada, and wintering in North America. The Wrangel Island population is composed of 2 subpopulations from a sympatric breeding colony but separate wintering areas, whereas the Banks Island population shares a sympatric wintering area in California, USA, with one of the Wrangel Island subpopulations. The Wrangel Island colony represents the last major snow goose population in Russia and has fluctuated considerably since 1970, whereas the Banks Island population has more than doubled. The reasons for these changes are unclear, but hypotheses include independent population demographics (survival and recruitment) and immigration and emigration among breeding or wintering populations. These demographic and movement patterns have important ecological and management implications for understanding goose population structure, harvest of admixed populations, and gene flow among populations with separate breeding or wintering areas. From 1993 to 1996, we neckbanded molting birds at their breeding colonies and resighted birds on the wintering grounds. We used multistate mark-recapture models to evaluate apparent survival rates, resighting rates, winter fidelity, and potential exchange among these populations. We also compared the utility of face stain in Wrangel Island breeding geese as a predictor of their wintering area. Our results showed similar apparent survival rates between subpopulations of Wrangel Island snow geese and lower apparent survival, but higher emigration, for the Banks Island birds. Males had lower apparent survival than females, most likely due to differences in neckband loss. Transition between wintering areas was low (exchange between the Banks and northern Wrangel Island populations. Face staining was an unreliable indicator of wintering area. Our findings suggest that northern and southern

Macrobenthic community structure of coastal Arabian Sea during the fall intermonsoon

Digital Repository Service at National Institute of Oceanography (India)

Ingole, B.S.; Gaonkar, U.V.; Deshmukh, A.; Mukherjee, I.; Sivadas, S.K.; Gophane, A.

that the FIM period is critical in structuring the coastal benthic community Results indicated Coscinodiscus sp and Thalassiosira sp were dominant in the phytoplankton and the microphytobenthos community Zooplankton was dominated by small sized calanoid...

Does Extreme El Niño Have a Different Effect on the Stratosphere in Boreal Winter Than Its Moderate Counterpart?

Science.gov (United States)

Zhou, Xin; Li, Jianping; Xie, Fei; Chen, Quanliang; Ding, Ruiqiang; Zhang, Wenxia; Li, Yang

2018-03-01

A robust impact of El Niño on the Northern Hemisphere (NH) polar stratosphere has been demonstrated by previous studies, although whether this applies to extreme El Niño is uncertain. The time evolution of the response of the NH stratospheric vortex to extreme El Niño, compared with that to moderate eastern Pacific El Niño, is addressed by means of composite analysis using the National Centers for Environmental Prediction/Department of Energy reanalysis data set from 1980 to 2016. Lead-lag analysis indicates that the El Niño signal actually leads the stratospheric response by 2 months. Considering the time lag, the signal of December-January-February El Niño in the NH stratospheric vortex should mature in the February-March-April season (late winter/early spring). The patterns of circulation and temperature for late winter/early spring during extreme and moderate El Niño events are significant, exhibiting similar structure. The results are confirmed with the Whole Atmosphere Community Climate Model version 4 model, which is forced with observed SSTs of extreme and moderate El Niño in winter (December-January-February) to analyze the day-to-day propagation of their signals. Note that the magnitudes of the stratospheric responses are much larger in the case of extreme El Niño, as stronger upward propagation of planetary waves leads to a weaker northern polar vortex than during moderate El Niño events.

Evaluation of special, functional and structural diversity of weeds community in pistachios (Pistacia vera L. orchards of Bardaskan County

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S. Elahi

2016-04-01

Full Text Available To study weed species diversity and community structure in pistachio (Pistacia vera L. orchards in 33 orchards of 12 villages an investigation was conducted in Bardaskan County, Khorasan Razavi Province, Iran during 2008-2009. Weed population sampling was conducted in a w shape method using 1m² quadrate. The results showed that the weeds of pistachio orchards were belonging to 15 families and 44 species. dicotyledons (31 species were more than monocotyledons (13 species. Such as in this community, weed species of C3, C4, annual and perennial were 26, 18, 28 and 13, respectively. The majority of weed species were belonging to the plant families of chenopodiceae (9 species and poaceae (12 species amongst dicotyledons and monocotyledons, respectively. the most important species of monocotyledon annual weeds were including Echinochloa crus-gali, Digitaria sanguinlis, Setaria viridis and perennial weeds were including Cyperus routundus, Cynodon dactylon and convolvulus arvensis. Weed species were grouped in seven clusters for density average, frequency and uniformity (similarity 75 percent whereas in eight clusters for relative density average, relative frequency and relative uniformity (similarity 75 percent. Amplitude changes of Shannon-winter diversity index were between 2.3 and 0.16 and of Simpson dominant index were between 0.97 and 0.17. The difference among indices of biodiversity and dominant clusters were relative to scale and type of management practices.

A game theoretic algorithm to detect overlapping community structure in networks

Science.gov (United States)

Zhou, Xu; Zhao, Xiaohui; Liu, Yanheng; Sun, Geng

2018-04-01

Community detection can be used as an important technique for product and personalized service recommendation. A game theory based approach to detect overlapping community structure is introduced in this paper. The process of the community formation is converted into a game, when all agents (nodes) cannot improve their own utility, the game process will be terminated. The utility function is composed of a gain and a loss function and we present a new gain function in this paper. In addition, different from choosing action randomly among join, quit and switch for each agent to get new label, two new strategies for each agent to update its label are designed during the game, and the strategies are also evaluated and compared for each agent in order to find its best result. The overlapping community structure is naturally presented when the stop criterion is satisfied. The experimental results demonstrate that the proposed algorithm outperforms other similar algorithms for detecting overlapping communities in networks.

Interlinking backscatter, grain size and benthic community structure

Science.gov (United States)

McGonigle, Chris; Collier, Jenny S.

2014-06-01

The relationship between acoustic backscatter, sediment grain size and benthic community structure is examined using three different quantitative methods, covering image- and angular response-based approaches. Multibeam time-series backscatter (300 kHz) data acquired in 2008 off the coast of East Anglia (UK) are compared with grain size properties, macrofaunal abundance and biomass from 130 Hamon and 16 Clamshell grab samples. Three predictive methods are used: 1) image-based (mean backscatter intensity); 2) angular response-based (predicted mean grain size), and 3) image-based (1st principal component and classification) from Quester Tangent Corporation Multiview software. Relationships between grain size and backscatter are explored using linear regression. Differences in grain size and benthic community structure between acoustically defined groups are examined using ANOVA and PERMANOVA+. Results for the Hamon grab stations indicate significant correlations between measured mean grain size and mean backscatter intensity, angular response predicted mean grain size, and 1st principal component of QTC analysis (all p PERMANOVA for the Hamon abundance shows benthic community structure was significantly different between acoustic groups for all methods (p ≤ 0.001). Overall these results show considerable promise in that more than 60% of the variance in the mean grain size of the Clamshell grab samples can be explained by mean backscatter or acoustically-predicted grain size. These results show that there is significant predictive capacity for sediment characteristics from multibeam backscatter and that these acoustic classifications can have ecological validity.

[Response of forest bird communities to forest gap in winter in southwestern China].

Science.gov (United States)

Zhao, Dong-Dong; Wu, Ying-Huan; Lu, Zhou; Jiang, Guang-Wei; Zhou, Fang

2013-06-01

Although forest gap ecology is an important field of study, research remains limited. By plot setting and point counted observation, the response of birds to forest gaps in winter as well as bird distribution patterns in forest gaps and intact canopies were studied in a north tropical monsoon forest of southwestern China from November 2011 to February 2012 in the Fangcheng Golden Camellia National Nature Reserve, Guangxi. The regression equation of bird species diversity to habitat factor was Y1=0.611+0.002 X13+0.043 X2+0.002 X5-0.003 X8+0.006 X10+0.008 X1 and the regression equation of bird species dominance index to habitat factor was Y3=0.533+0.001 X13+0.019 X2+0.002 X3-0.017 X4+0.002 X1. There were 45 bird species (2 orders and 13 families) recorded in the forest gap, accounting for 84.9% of all birds (n=45), with an average of 9.6 species (range: 2-22). Thirty-nine bird species (5 orders and 14 families) were recorded in non-gap areas, accounting for 73.6% of all birds (n=39), with an average of 5.3 species (range: 1-12). These results suggested that gap size, arbor average height (10 m from gap margin), arbor quantity (10 m from gap margin), shrub quantity (10 m from gap margin), herbal average coverage (1 m from gap margin) and bare land ratio were the key forest gap factors that influenced bird diversities. On the whole, bird diversity in the forest gap was greater than in the intact canopy. Spatial distributions in the forest gaps were also observed in the bird community. Most birds foraged in the "middle" and "canopy" layers in the vertical stratification. In addition, "nearly from" and "close from" contained more birds in relation to horizontal stratification. Feeding niche differentiation was suggested as the main reason for these distribution patterns.

Comparison and validation of community structures in complex networks

Science.gov (United States)

Gustafsson, Mika; Hörnquist, Michael; Lombardi, Anna

2006-07-01

The issue of partitioning a network into communities has attracted a great deal of attention recently. Most authors seem to equate this issue with the one of finding the maximum value of the modularity, as defined by Newman. Since the problem formulated this way is believed to be NP-hard, most effort has gone into the construction of search algorithms, and less to the question of other measures of community structures, similarities between various partitionings and the validation with respect to external information. Here we concentrate on a class of computer generated networks and on three well-studied real networks which constitute a bench-mark for network studies; the karate club, the US college football teams and a gene network of yeast. We utilize some standard ways of clustering data (originally not designed for finding community structures in networks) and show that these classical methods sometimes outperform the newer ones. We discuss various measures of the strength of the modular structure, and show by examples features and drawbacks. Further, we compare different partitions by applying some graph-theoretic concepts of distance, which indicate that one of the quality measures of the degree of modularity corresponds quite well with the distance from the true partition. Finally, we introduce a way to validate the partitionings with respect to external data when the nodes are classified but the network structure is unknown. This is here possible since we know everything of the computer generated networks, as well as the historical answer to how the karate club and the football teams are partitioned in reality. The partitioning of the gene network is validated by use of the Gene Ontology database, where we show that a community in general corresponds to a biological process.

Multilabel user classification using the community structure of online networks.

Science.gov (United States)

Rizos, Georgios; Papadopoulos, Symeon; Kompatsiaris, Yiannis

2017-01-01

We study the problem of semi-supervised, multi-label user classification of networked data in the online social platform setting. We propose a framework that combines unsupervised community extraction and supervised, community-based feature weighting before training a classifier. We introduce Approximate Regularized Commute-Time Embedding (ARCTE), an algorithm that projects the users of a social graph onto a latent space, but instead of packing the global structure into a matrix of predefined rank, as many spectral and neural representation learning methods do, it extracts local communities for all users in the graph in order to learn a sparse embedding. To this end, we employ an improvement of personalized PageRank algorithms for searching locally in each user's graph structure. Then, we perform supervised community feature weighting in order to boost the importance of highly predictive communities. We assess our method performance on the problem of user classification by performing an extensive comparative study among various recent methods based on graph embeddings. The comparison shows that ARCTE significantly outperforms the competition in almost all cases, achieving up to 35% relative improvement compared to the second best competing method in terms of F1-score.

Multilabel user classification using the community structure of online networks.

Directory of Open Access Journals (Sweden)

Georgios Rizos

Full Text Available We study the problem of semi-supervised, multi-label user classification of networked data in the online social platform setting. We propose a framework that combines unsupervised community extraction and supervised, community-based feature weighting before training a classifier. We introduce Approximate Regularized Commute-Time Embedding (ARCTE, an algorithm that projects the users of a social graph onto a latent space, but instead of packing the global structure into a matrix of predefined rank, as many spectral and neural representation learning methods do, it extracts local communities for all users in the graph in order to learn a sparse embedding. To this end, we employ an improvement of personalized PageRank algorithms for searching locally in each user's graph structure. Then, we perform supervised community feature weighting in order to boost the importance of highly predictive communities. We assess our method performance on the problem of user classification by performing an extensive comparative study among various recent methods based on graph embeddings. The comparison shows that ARCTE significantly outperforms the competition in almost all cases, achieving up to 35% relative improvement compared to the second best competing method in terms of F1-score.

A winter dinoflagellate bloom drives high rates of primary production in a Patagonian fjord ecosystem

Science.gov (United States)

Montero, P.; Pérez-Santos, I.; Daneri, G.; Gutiérrez, M. H.; Igor, G.; Seguel, R.; Purdie, D.; Crawford, D. W.

2017-12-01

A dense winter bloom of the dinoflagellate Heterocapsa triquetra was observed at a fixed station (44°35.3‧S; 72°43.6‧W) in the Puyuhuapi Fjord in Chilean Patagonia during July 2015. H. triquetra dominated the phytoplankton community in the surface waters between 2 and 15 m (13-58 × 109 cell m-2), with abundances some 3 to 15 times higher than the total abundance of the diatom assemblage, which was dominated by Skeletonema spp. The high abundance of dinoflagellates was reflected in high rates of gross primary production (GPP; 0.6-1.6 g C m-2 d-1) and chlorophyll-a concentration (Chl-a; 70-199.2 mg m-2) that are comparable to levels reported in spring diatom blooms in similar Patagonian fjords. We identify the main forcing factors behind a pulse of organic matter production during the non-productive winter season, and test the hypothesis that low irradiance levels are a key factor limiting phytoplankton blooms and subsequent productivity during winter. Principal Component Analysis (PCA) indicated that GPP rates were significantly correlated (r = -0.8, p bloom. The bloom occurred under low surface irradiance levels characteristic of austral winter and was accompanied by strong northern winds, associated with the passage of a low-pressure system, and a water column dominated by double diffusive layering. To our knowledge, this is the first report of a dense dinoflagellate bloom during deep austral winter in a Patagonian fjord, and our data challenge the paradigm of light limitation as a factor controlling phytoplankton blooms in this region in winter.

36 CFR 1002.19 - Winter activities.

Science.gov (United States)

2010-07-01

... RECREATION § 1002.19 Winter activities. (a) Skiing, snowshoeing, ice skating, sledding, innertubing, tobogganing and similar winter sports are prohibited on Presidio Trust roads and in parking areas open to...

Developing Structured-Learning Exercises for a Community Advanced Pharmacy Practice Experience

OpenAIRE

Thomas, Renee Ahrens

2006-01-01

The recent growth in the number of pharmacy schools across the nation has resulted in the need for high-quality community advanced pharmacy practice experience (APPE) sites. A vital part of a student's education, these APPEs should be structured and formalized to provide an environment conducive to student learning. This paper discusses how to use a calendar, structured-learning activities, and scheduled evaluations to develop students' knowledge, skills, and abilities in a community pharmacy...

Developing structured-learning exercises for a community advanced pharmacy practice experience.

Science.gov (United States)

Thomas, Renee Ahrens

2006-02-15

The recent growth in the number of pharmacy schools across the nation has resulted in the need for high-quality community advanced pharmacy practice experience (APPE) sites. A vital part of a student's education, these APPEs should be structured and formalized to provide an environment conducive to student learning. This paper discusses how to use a calendar, structured-learning activities, and scheduled evaluations to develop students' knowledge, skills, and abilities in a community pharmacy setting.

Reproduction and community structure of fish from winter catch sites from industrial shrimp bycatch from the northeast and southeast Mexican Pacific

Directory of Open Access Journals (Sweden)

Jorge de Jesus Tirado-Ibarra

2018-03-01

Full Text Available The shrimp fishery is one of the most important fisheries in the world, although the low selectivity from trawling nets has led to the capture of a large number of non-target species. Shrimp-bycatch species include a large number of fish and invertebrate species, of which fish species are the most abundant. The present study aims to determine the community structure as well as the average sizes at first maturity of the fish species from shrimp-bycatch caught from industrial fisheries in the Mexican Pacific from Sinaloa to Guerrero, from January to March 2015. The shrimp-bycatch fish diversity value was found to be 2.22. A total of 37 species of finfish were found, of which five were considered rare. The fish species with the highest Importance Value Index (IVI levels were Pseudupeneus grandisquamis, Paralichthys woolmani, Lutjanus peru and Diapterus peruvianus. The average size at first maturity was calculated for all species. Of the analysed organisms, 90% were in the juvenile stage, including species with riverine and artisanal fisheries. The present study demonstrates the risk within marine populations to different non-target species due to the poor selectivity of shrimp trawls.

Detection of stable community structures within gut microbiota co-occurrence networks from different human populations.

Science.gov (United States)

Jackson, Matthew A; Bonder, Marc Jan; Kuncheva, Zhana; Zierer, Jonas; Fu, Jingyuan; Kurilshikov, Alexander; Wijmenga, Cisca; Zhernakova, Alexandra; Bell, Jordana T; Spector, Tim D; Steves, Claire J

2018-01-01

Microbes in the gut microbiome form sub-communities based on shared niche specialisations and specific interactions between individual taxa. The inter-microbial relationships that define these communities can be inferred from the co-occurrence of taxa across multiple samples. Here, we present an approach to identify comparable communities within different gut microbiota co-occurrence networks, and demonstrate its use by comparing the gut microbiota community structures of three geographically diverse populations. We combine gut microbiota profiles from 2,764 British, 1,023 Dutch, and 639 Israeli individuals, derive co-occurrence networks between their operational taxonomic units, and detect comparable communities within them. Comparing populations we find that community structure is significantly more similar between datasets than expected by chance. Mapping communities across the datasets, we also show that communities can have similar associations to host phenotypes in different populations. This study shows that the community structure within the gut microbiota is stable across populations, and describes a novel approach that facilitates comparative community-centric microbiome analyses.

Examining winter visitor use in Yellowstone National Park

Science.gov (United States)

Mae A. Davenport; Wayne A. Freimund; William T. Borrie; Robert E. Manning; William A. Valliere; Benjamin Wang

2000-01-01

This research was designed to assist the managers of Yellowstone National Park (YNP) in their decision making about winter visitation. The focus of this report is on winter use patterns and winter visitor preferences. It is the author’s hope that this information will benefit both the quality of winter experiences and the stewardship of the park resources. This report...

Winter Dew Harvest in Mexico City

Directory of Open Access Journals (Sweden)

Arias-Torres Jorge Ernesto

2015-12-01

Full Text Available This study presents experimental and theoretical results of winter dew harvest in México City in terms of condensation rate. A simplified theoretical model based on a steady-state energy balance on a radiator-condenser was fitted, as a function of the ambient temperature, the relative humidity and the wind velocity. A glass sheet and aluminum sheet white-painted were used as samples over the outdoor experiments. A good correlation was obtained between the theoretical and experimental data. The experimental results show that there was condensation in 68% of the winter nights on both condensers. The total winter condensed mass was 2977 g/m2 and 2888 g/m2 on the glass sheet and aluminum sheet white-painted, respectively. Thus, the condensed mass on the glass was only 3% higher than that on the painted surface. The maximum nightly dew harvests occurred during December, which linearly reduced from 50 g/m2 night to 22 g/m2 night as the winter months went by. The condensation occurred from 1:00 a.m. to 9:00 a.m., with maximum condensation rates between 6:00 a.m. and 7:00 a.m. The dew harvest can provide a partial alternative to the winter water shortage in certain locations with similar climates to the winter in Mexico City, as long as pollution is not significant.

The impacts of triclosan on anaerobic community structures, function, and antimicrobial resistance.

Science.gov (United States)

McNamara, Patrick J; LaPara, Timothy M; Novak, Paige J

2014-07-01

Triclosan is a widespread antimicrobial agent that accumulates in anaerobic digesters used to treat the residual solids generated at municipal wastewater treatment plants; there is very little information, however, about how triclosan impacts microbial communities in anaerobic digesters. We investigated how triclosan impacts the community structure, function and antimicrobial resistance genes in lab-scale anaerobic digesters. Previously exposed (to triclosan) communities were amended with 5, 50, and 500 mg/kg of triclosan, corresponding to the median, 95th percentile, and 4-fold higher than maximum triclosan concentration that has been detected in U.S. biosolids. Triclosan amendment caused all of the Bacteria and Archaea communities to structurally diverge from that of the control cultures (based on ARISA). At the end of the experiment, all triclosan-amended Archaea communities had diverged from the control communities, regardless of the triclosan concentration added. In contrast, over time the Bacteria communities that were amended with lower concentrations of triclosan (5 mg/kg and 50 mg/kg) initially diverged and then reconverged with the control community structure. Methane production at 500 mg/kg was nearly half the methane production in control cultures. At 50 mg/kg, a large variability in methane production was observed, suggesting that 50 mg/kg may be a tipping point where function begins to fail in some communities. When previously unexposed communities were exposed to 500 mg triclosan/kg, function was maintained, but the abundance of a gene encoding for triclosan resistance (mexB) increased. This research suggests that triclosan could inhibit methane production in anaerobic digesters if concentrations were to increase and may also select for resistant Bacteria. In both cases, microbial community composition and exposure history alter the influence of triclosan.

The consultation challenge in small remote northern communities

Energy Technology Data Exchange (ETDEWEB)

Malcolm, D.G., E-mail: david.malcolm@mcri.ca [Malcolm and Associates, Inuvik, Northwest Territories (Canada)

2014-07-01

There is a strong necessity for nuclear power project proponents to begin consultation with community leaders at the concept design stage as the first step in a licensing process. The paper discusses the physical and social challenges of reliable and environmentally sound electricity generation in remote northern Aboriginal communities in Canada. There are several hundred remote communities in the boreal region and throughout the Arctic. Electrical energy requirements are usually a few megawatts. Access to some Arctic remote communities is by air and small water craft only, except when winters are cold enough for winter roads to be constructed for a few weeks each year. These communities, as well as new mining operations and their camp communities, provide a market segment for very small reactors. However, there are social acceptance hurdles to be addressed, as well as the legal requirement at all government levels of the duty to consult. Trust-building is a must when working with First Nations, Metis, and Inuit communities, and this requires community presence of the project developers long before proposals for new generation facilities are presented for license approval. Input from communities and other stakeholders is a vital part of the licensing process. Community members need to feel comfortable with the project proponents as well as the project itself. In some cases a project is rejected because the community council or development corporation feels left out of economic benefits that might be obtained through a negotiation process. (author)

The consultation challenge in small remote northern communities

International Nuclear Information System (INIS)

Malcolm, D.G.

2014-01-01

There is a strong necessity for nuclear power project proponents to begin consultation with community leaders at the concept design stage as the first step in a licensing process. The paper discusses the physical and social challenges of reliable and environmentally sound electricity generation in remote northern Aboriginal communities in Canada. There are several hundred remote communities in the boreal region and throughout the Arctic. Electrical energy requirements are usually a few megawatts. Access to some Arctic remote communities is by air and small water craft only, except when winters are cold enough for winter roads to be constructed for a few weeks each year. These communities, as well as new mining operations and their camp communities, provide a market segment for very small reactors. However, there are social acceptance hurdles to be addressed, as well as the legal requirement at all government levels of the duty to consult. Trust-building is a must when working with First Nations, Metis, and Inuit communities, and this requires community presence of the project developers long before proposals for new generation facilities are presented for license approval. Input from communities and other stakeholders is a vital part of the licensing process. Community members need to feel comfortable with the project proponents as well as the project itself. In some cases a project is rejected because the community council or development corporation feels left out of economic benefits that might be obtained through a negotiation process. (author)

Trophic structure of the fouling community in Odessa Bay (Black Sea

Directory of Open Access Journals (Sweden)

A. Y. Varigin

2016-06-01

Full Text Available The trophic structure of the coastal fouling community of Odessa Bay (Black Sea, which was composed of 10 species of macrophytes, 57 invertebrate species and 4 species of fish, was determined. The basic trophic relationship between organisms composing the community is shown. A minimization of interspecific trophic competition within the community is noted. The main sources of food material entering the fouling community were determined. We show that a significant proportion of food in the form of detritus, dissolved organic matter and small planktonic organisms enters the community from the water column. Filtration and pumping activity of sestonophage-organisms, particularly mussels, helps to attract food material to the community. Primary producers of the community are macrophytes and microphytes, which develop on account of their photosynthetic activity and ensure the provision of food to herbivores. The trophic group of detritophages consumes different fractions of the detritus which accumulates in the byssus threads of bivalve molluscs. In this context, mussel druses act as sediment traps, collecting detritus. Numerous polyphages, which are essentially omnivores and do not usually lack food material, were noted in the community. A small group of carnivorous invertebrates, whose representatives actively attack small animals, was identified. The abundance of these species in the community was about 1%, and their biomass less than 0.6%. Fish living in macrophyte weeds are the consumers in the community. We determined that the highest relative abundance (over 36% in the fouling community was reached by sestonophages and polyphages. We found that the undisputed leader in the relative biomass (over 97% in the fouling community ofOdessaBaywas the sestonophages (mainly composed of mussels. We determined that the trophic structure index of the community was 0.94, which confirms the significant dominance in biomass of bivalves over other species in

Community Structure Analysis of Gene Interaction Networks in Duchenne Muscular Dystrophy.

Directory of Open Access Journals (Sweden)

Tejaswini Narayanan

Full Text Available Duchenne Muscular Dystrophy (DMD is an important pathology associated with the human skeletal muscle and has been studied extensively. Gene expression measurements on skeletal muscle of patients afflicted with DMD provides the opportunity to understand the underlying mechanisms that lead to the pathology. Community structure analysis is a useful computational technique for understanding and modeling genetic interaction networks. In this paper, we leverage this technique in combination with gene expression measurements from normal and DMD patient skeletal muscle tissue to study the structure of genetic interactions in the context of DMD. We define a novel framework for transforming a raw dataset of gene expression measurements into an interaction network, and subsequently apply algorithms for community structure analysis for the extraction of topological communities. The emergent communities are analyzed from a biological standpoint in terms of their constituent biological pathways, and an interpretation that draws correlations between functional and structural organization of the genetic interactions is presented. We also compare these communities and associated functions in pathology against those in normal human skeletal muscle. In particular, differential enhancements are observed in the following pathways between pathological and normal cases: Metabolic, Focal adhesion, Regulation of actin cytoskeleton and Cell adhesion, and implication of these mechanisms are supported by prior work. Furthermore, our study also includes a gene-level analysis to identify genes that are involved in the coupling between the pathways of interest. We believe that our results serve to highlight important distinguishing features in the structural/functional organization of constituent biological pathways, as it relates to normal and DMD cases, and provide the mechanistic basis for further biological investigations into specific pathways differently regulated

Strong influence of regional species pools on continent-wide structuring of local communities

OpenAIRE

Lessard, Jean-Philippe; Borregaard, Michael K.; Fordyce, James A.; Rahbek, Carsten; Weiser, Michael D.; Dunn, Robert R.; Sanders, Nathan J.

2011-01-01

There is a long tradition in ecology of evaluating the relative contribution of the regional species pool and local interactions on the structure of local communities. Similarly, a growing number of studies assess the phylogenetic structure of communities, relative to that in the regional species pool, to examine the interplay between broad-scale evolutionary and fine-scale ecological processes. Finally, a renewed interest in the influence of species source pools on communities has shown that...

Cyanobacterial Community Structure In Lithifying Mats of A Yellowstone Hotspring-Implications for Precambrian Stromatolite Biocomplexity

Science.gov (United States)

Lau, Evan; Nash, C. Z.; Vogler, D. R.; Cullings, K.; DeVincenzi, Donald (Technical Monitor)

2002-01-01

Denaturing Gradient Gel Electrophoresis (DGGE) of partial 16S rRNA gene sequences was used to investigate the molecular biodiversity of cyanobacterial communities inhabiting various lithified morpho-structures in two hotsprings of Yellowstone National Park. These morpho-structures - flat-topped columns, columnar cones, and ridged cones - resemble ancient stromatolites, which are possibly biogenic in origin. The top, middle and bottom sections of these lithified morpho-structures, as well as surrounding non-lithified mats were analyzed to determine the vertical and spatial distribution of cyanobacterial communities. Results from DGGE indicate that the cyanobacterial community composition of lithified morpho-structures (flat-topped columns, columnar cones, and ridged cones) were largely similar in vertical distribution as well as among the morpho-structures being studied. Preliminary results indicate that the cyanobacterial communities in these lithified morpho-structures were significantly different from communities in surrounding non-lithified mats. These results provide additional support to the theory that certain Phormidium/Leptolyngbya species are involved in the morphogenesis of lithifying morpho-structures in hotsprings and may have played a role in the formation of ancient stromatolites.

Plant traits determine the phylogenetic structure of arbuscular mycorrhizal fungal communities.

Science.gov (United States)

López-García, Álvaro; Varela-Cervero, Sara; Vasar, Martti; Öpik, Maarja; Barea, José M; Azcón-Aguilar, Concepción

2017-12-01

Functional diversity in ecosystems has traditionally been studied using aboveground plant traits. Despite the known effect of plant traits on the microbial community composition, their effects on the microbial functional diversity are only starting to be assessed. In this study, the phylogenetic structure of arbuscular mycorrhizal (AM) fungal communities associated with plant species differing in life cycle and growth form, that is, plant life forms, was determined to unravel the effect of plant traits on the functional diversity of this fungal group. The results of the 454 pyrosequencing showed that the AM fungal community composition differed across plant life forms and this effect was dependent on the soil collection date. Plants with ruderal characteristics tended to associate with phylogenetically clustered AM fungal communities. By contrast, plants with resource-conservative traits associated with phylogenetically overdispersed AM fungal communities. Additionally, the soil collected in different seasons yielded AM fungal communities with different phylogenetic dispersion. In summary, we found that the phylogenetic structure, and hence the functional diversity, of AM fungal communities is dependent on plant traits. This finding adds value to the use of plant traits for the evaluation of belowground ecosystem diversity, functions and processes. © 2017 John Wiley & Sons Ltd.

Nash Stability in Additively Separable Hedonic Games and Community Structures

DEFF Research Database (Denmark)

Olsen, Martin

2009-01-01

  We prove that the problem of deciding whether a Nash stable   partition exists in an Additively Separable Hedonic Game is   NP-complete. We also show that the problem of deciding whether a   non trivial Nash stable partition exists in an   Additively Separable Hedonic Game with   non......-negative and symmetric   preferences is NP-complete. We motivate our study of the   computational complexity by linking Nash stable partitions in   Additively Separable Hedonic Games to community structures in   networks. Our results formally justify that computing community   structures in general is hard....

Relations between water physico-chemistry and benthic algal communities in a northern Canadian watershed: defining reference conditions using multiple descriptors of community structure.

Science.gov (United States)

Thomas, Kathryn E; Hall, Roland I; Scrimgeour, Garry J

2015-09-01

Defining reference conditions is central to identifying environmental effects of anthropogenic activities. Using a watershed approach, we quantified reference conditions for benthic algal communities and their relations to physico-chemical conditions in rivers in the South Nahanni River watershed, NWT, Canada, in 2008 and 2009. We also compared the ability of three descriptors that vary in terms of analytical costs to define algal community structure based on relative abundances of (i) all algal taxa, (ii) only diatom taxa, and (iii) photosynthetic pigments. Ordination analyses showed that variance in algal community structure was strongly related to gradients in environmental variables describing water physico-chemistry, stream habitats, and sub-watershed structure. Water physico-chemistry and local watershed-scale descriptors differed significantly between algal communities from sites in the Selwyn Mountain ecoregion compared to sites in the Nahanni-Hyland ecoregions. Distinct differences in algal community types between ecoregions were apparent irrespective of whether algal community structure was defined using all algal taxa, diatom taxa, or photosynthetic pigments. Two algal community types were highly predictable using environmental variables, a core consideration in the development of Reference Condition Approach (RCA) models. These results suggest that assessments of environmental impacts could be completed using RCA models for each ecoregion. We suggest that use of algal pigments, a high through-put analysis, is a promising alternative compared to more labor-intensive and costly taxonomic approaches for defining algal community structure.

Permafrost soil characteristics and microbial community structure across a boreal forest watershed vary over short spatial scales and dictate community responses to thaw.

Science.gov (United States)

Stegen, J.; Bottos, E. M.; Kennedy, D.; Romero, E. B.; Fansler, S.; Chu, R. K.; Tfaily, M.; Jansson, J.; Bernstein, H. C.; Brown, J. M.; Markillie, L. M.

2017-12-01

Understanding drivers of permafrost microbial community structure and function is critical for understanding permafrost microbiology and predicting ecosystem responses to thaw; however, studies describing ecological controls on these communities are lacking. We hypothesize that permafrost communities are uniquely shaped by constraints imposed by prolonged freezing, and decoupled from the selective factors that influence non-permafrost soil communities, but that pre-thaw environmental and community characteristics will be strong determinants of community structure and function post-thaw. We characterized patterns of environmental variation and microbial community composition in sixty permafrost samples spanning landscape gradients in a boreal forest watershed, and monitored community responses to thaw. Consistent with our hypothesis, we found that, proportionally, the strongest process influencing permafrost community composition was dispersal limitation (0.36), exceeding the influence of homogenous selection (0.21) and variable selection (0.16), and that deterministic selection arose primarily from energetic constraints of the permafrost environment. Our data supported a structural equation model in which organic carbon thermodynamics and organic acid content, influenced redox conditions and total selection. Post-thaw community composition was found to be driven primarily by pre-thaw community composition, indicating a strong influence of historical conditions. Together, these results suggest that community responses to thaw may be highly varied over short distances and that changes in community structure and function are likely to be drastic, as changes to system hydrology mobilize organisms and nutrients, thereby relieving the primary constraints on the system. These findings are being integrated with metabolomic and metatranscriptomic analyses to improve understanding of how pre-thaw conditions can be used to predict microbial activity post-thaw.

Winter season air pollution in El Paso-Ciudad Juarez. A review of air pollution studies in an international airshed

Energy Technology Data Exchange (ETDEWEB)

Einfeld, W.; Church, H.W.

1995-03-01

This report summarizes a number of research efforts completed over the past 20 years in the El Paso del Norte region to characterize pollution sources and air quality trends. The El Paso del Norte region encompasses the cities of El Paso, Texas and Ciudad Juarez, Chihuahua and is representative of many US-Mexico border communities that are facing important air quality issues as population growth and industrialization of Mexican border communities continue. Special attention is given to a group of studies carried out under special US Congressional funding and administered by the US Environmental Protection Agency. Many of these studies were fielded within the last several years to develop a better understanding of air pollution sources and trends in this typical border community. Summary findings from a wide range of studies dealing with such issues as the temporal and spatial distribution of pollutants and pollution potential from both stationary and mobile sources in both cities are presented. Particular emphasis is given to a recent study in El Paso-Ciudad Juarez that focussed on winter season PM{sub 10} pollution in El Paso-Ciudad Juarez. Preliminary estimates from this short-term study reveal that biomass combustion products and crustal material are significant components of winter season PM{sub 10} in this international border community.

Microbial community functional structures in wastewater treatment plants as characterized by GeoChip.

Science.gov (United States)

Wang, Xiaohui; Xia, Yu; Wen, Xianghua; Yang, Yunfeng; Zhou, Jizhong

2014-01-01

Biological WWTPs must be functionally stable to continuously and steadily remove contaminants which rely upon the activity of complex microbial communities. However, knowledge is still lacking in regard to microbial community functional structures and their linkages to environmental variables. To investigate microbial community functional structures of activated sludge in wastewater treatment plants (WWTPs) and to understand the effects of environmental factors on their structure. 12 activated sludge samples were collected from four WWTPs in Beijing. A comprehensive functional gene array named GeoChip 4.2 was used to determine the microbial functional genes involved in a variety of biogeochemical processes such as carbon, nitrogen, phosphorous and sulfur cycles, metal resistance, antibiotic resistance and organic contaminant degradation. High similarities of the microbial community functional structures were found among activated sludge samples from the four WWTPs, as shown by both diversity indices and the overlapped genes. For individual gene category, such as egl, amyA, lip, nirS, nirK, nosZ, ureC, ppx, ppk, aprA, dsrA, sox and benAB, there were a number of microorganisms shared by all 12 samples. Canonical correspondence analysis (CCA) showed that the microbial functional patterns were highly correlated with water temperature, dissolved oxygen (DO), ammonia concentrations and loading rate of chemical oxygen demand (COD). Based on the variance partitioning analyses (VPA), a total of 53% of microbial community variation from GeoChip data can be explained by wastewater characteristics (25%) and operational parameters (23%), respectively. This study provided an overall picture of microbial community functional structures of activated sludge in WWTPs and discerned the linkages between microbial communities and environmental variables in WWTPs.

Microbial community functional structures in wastewater treatment plants as characterized by GeoChip.

Directory of Open Access Journals (Sweden)

Xiaohui Wang

Full Text Available BACKGROUND: Biological WWTPs must be functionally stable to continuously and steadily remove contaminants which rely upon the activity of complex microbial communities. However, knowledge is still lacking in regard to microbial community functional structures and their linkages to environmental variables. AIMS: To investigate microbial community functional structures of activated sludge in wastewater treatment plants (WWTPs and to understand the effects of environmental factors on their structure. METHODS: 12 activated sludge samples were collected from four WWTPs in Beijing. A comprehensive functional gene array named GeoChip 4.2 was used to determine the microbial functional genes involved in a variety of biogeochemical processes such as carbon, nitrogen, phosphorous and sulfur cycles, metal resistance, antibiotic resistance and organic contaminant degradation. RESULTS: High similarities of the microbial community functional structures were found among activated sludge samples from the four WWTPs, as shown by both diversity indices and the overlapped genes. For individual gene category, such as egl, amyA, lip, nirS, nirK, nosZ, ureC, ppx, ppk, aprA, dsrA, sox and benAB, there were a number of microorganisms shared by all 12 samples. Canonical correspondence analysis (CCA showed that the microbial functional patterns were highly correlated with water temperature, dissolved oxygen (DO, ammonia concentrations and loading rate of chemical oxygen demand (COD. Based on the variance partitioning analyses (VPA, a total of 53% of microbial community variation from GeoChip data can be explained by wastewater characteristics (25% and operational parameters (23%, respectively. CONCLUSIONS: This study provided an overall picture of microbial community functional structures of activated sludge in WWTPs and discerned the linkages between microbial communities and environmental variables in WWTPs.

Coupled Effects of Climatic and Socio-economic Factors on Winter Cropping in India

Science.gov (United States)

Jain, M.; Mondal, P.; Galford, G. L.; DeFries, R. S.

2015-12-01

India is predicted to be one of the most vulnerable regions in terms of agricultural sensitivity to future climate changes. Approximately 69% of India's population is rural, and over 55% of the working population relies on agriculture for sustenance and livelihoods. Indian smallholder farmers who own less than 2 ha of farmland represent 78% of the total Indian farmers and produce 41% of the country's food crops. These smallholder farmers are among some of the most vulnerable communities to climatic and economic changes due to limited access to technology, infrastructure, markets, and institutional or financial support in the case of adverse climatic events. Baseline information on agricultural sensitivity to climate variability will provide useful information for regional-level, and eventually state- and national-level, strategies and policies that promote adaption to climate variability. We use a decade of remote sensing analysis of cropping patterns and climatic factors along with census data for irrigation and demographic factors to understand winter cropping trajectories across agro-ecological zones in India. Findings from multiple agro-ecological zones indicate that there are three primary trajectories in winter cropping in India - increasing, fluctuating, and decreasing. In the Central Indian Highlands, for example, the most dominant trend is that of fluctuating cropped area, ranging between ~37,300 km2 in 2010 and ~21,100 km2 in 2013, which is associated with village-level access to irrigation and local labor dynamics. Clay soil type and increasing irrigation coverage were associated with intensification. Yet, suitable soil type and access to irrigation do not reduce vulnerability to high daytime temperatures that is negatively associated with winter crop cover. With pronounced winter warming projected in the coming decades, effective adaptation by smallholder farmers would require additional strategies, such as access to fine-scale temperature forecasts

Zooplankton community structure and dynamics during the transition ...

African Journals Online (AJOL)

This study investigates the zooplankton community structure and dynamics of Kufena Rock Pool during the transition from dry season (March to April) to rainy season (May to June) in Zaria, Nigeria. Physicochemical parameters such as temperature, hydrogen ion concentration, electrical conductivity and total dissolved ...

Friendship Concept and Community Network Structure among Elementary School and University Students.

Science.gov (United States)

Hernández-Hernández, Ana María; Viga-de Alva, Dolores; Huerta-Quintanilla, Rodrigo; Canto-Lugo, Efrain; Laviada-Molina, Hugo; Molina-Segui, Fernanda

2016-01-01

We use complex network theory to study the differences between the friendship concepts in elementary school and university students. Four friendship networks were identified from surveys. Three of these networks are from elementary schools; two are located in the rural area of Yucatán and the other is in the urban area of Mérida, Yucatán. We analyzed the structure and the communities of these friendship networks and found significant differences among those at the elementary schools compared with those at the university. In elementary schools, the students make friends mainly in the same classroom, but there are also links among different classrooms because of the presence of siblings and relatives in the schools. These kinds of links (sibling-friend or relative-friend) are called, in this work, "mixed links". The classification of the communities is based on their similarity with the classroom composition. If the community is composed principally of students in different classrooms, the community is classified as heterogeneous. These kinds of communities appear in the elementary school friendship networks mainly because of the presence of relatives and siblings. Once the links between siblings and relatives are removed, the communities resembled the classroom composition. On the other hand, the university students are more selective in choosing friends and therefore, even when they have friends in the same classroom, those communities are quite different to the classroom composition. Also, in the university network, we found heterogeneous communities even when the presence of sibling and relatives is negligible. These differences made up a topological structure quite different at different academic levels. We also found differences in the network characteristics. Once these differences are understood, the topological structure of the friendship network and the communities shaped in an elementary school could be predicted if we know the total number of students

Bacterial community structure at the microscale in two different soils

Czech Academy of Sciences Publication Activity Database

Michelland, R.; Thioulouse, J.; Kyselková, Martina; Grundmann, G.L.

2016-01-01

Roč. 72, č. 3 (2016), s. 717-724 ISSN 0095-3628 Institutional support: RVO:60077344 Keywords : abundancy-occupancy relationship * bacteria community structure * frequency-occupancy relationship * microscale in soil * soil microbial diversity * soil structure Subject RIV: EH - Ecology, Behaviour Impact factor: 3.630, year: 2016

Structure and composition of oligohaline marsh plant communities exposed to salinity pulses

Science.gov (United States)

Howard, R.J.; Mendelssohn, I.A.

2000-01-01

The response of two oligohaline marsh macrophyte communities to pulses of increased salinity was studied over a single growing season in a greenhouse experiment. The plant communities were allowed a recovery period in freshwater following the pulse events. The experimental treatments included: (1) salinity influx rate (rate of salinity increase from 0 to 12 gl-1); (2) duration of exposure to elevated salinity; and (3) water depth. The communities both included Sagittaria lancifolia L.; the codominant species were Eleocharis palustris (L.) Roemer and J.A. Schultes in community 1 and Schoenoplectus americanus (Pers.) Volk. ex Schinz and R. Keller in community 2. Effects of the treatments on sediment chemical characteristics (salinity, pH, redox potential, and sulfide and ammonium concentrations) and plant community attributes (aboveground and belowground biomass, stem density, leaf tissue nutrients, and species richness) were examined. The treatment effects often interacted to influence sediment and plant communities characteristics following recovery in fresh water. Salinity influx rate per se, however, had little effect on the abiotic or biotic response variables; significant influx effects were found when the 0 gl-1 (zero influx) treatment was compared to the 12 gl-1 treatments, regardless of the rate salinity was raised. A salinity level of 12 gl-1 had negative effects on plant community structure and composition; these effects were usually associated with 3 months of salinity exposure. Water depth often interacted with exposure duration, but increased water depth did independently decrease the values of some community response measures. Community 1 was affected more than community 2 in the most extreme salinity treatment (3 months exposure/15-cm water depth). Although species richness in both communities was reduced, structural changes were more dramatic in community 1. Biomass and stem density were reduced in community 1 overall and in both dominant species

Winter fine particulate air quality in Cranbrook, British Columbia, 1973 to 1999

International Nuclear Information System (INIS)

McDonald, L.E.

2001-06-01

Fine particulate levels in Cranbrook, BC, are analyzed and reported based on monitoring records which began in 1973. Prior to 1988 the sampler collected all particle sizes, but was subsequently replaced with a selective size inlet to capture only PM 1 0 particles or smaller. A mathematical relationship was produced and used to convert historical total suspended particulates measurements to PM 1 0. It was determined that only monitoring records obtained during the winter months could be reliably converted in this fashion; however, that was not a problem since the winter months happen to correspond to the highest levels of fine particulates. Results of the analysis showed increased levels of PM 1 0 from the early 1970s to the early 1980s; during this time average and maximum annual PM 1 0 levels in Cranbrook were higher than those in Los Angeles in 1999. Winter PM 1 0 levels began to fall through the late 1980s and early 1990s. The lowest average and maximum (18 microgram/cubic metre and 47 microgram/cubic metre, respectively) was recorded in the winter of 1996/1997. Worst conditions were recorded in 1980/1981 when 15 of 21 samples exceeded the current provincial PM 1 0 air quality objective of 50 microgram/cubic metre. In the five winters between 1994/1995 and 1998/1999 only three of 109 samples exceeded the provincial objective. There appears to be no correlation between known changes in industrial and mobile sources of pollutants and historical patterns of fine particulate air pollution in Cranbrook, BC. Observation and experience over three decades suggest that the major source of PM 1 0 in Cranbrook was combustion of wood for home heating. The most probable major cause of the improvements in winter air quality was identified as the gradual conversion from wood to natural gas fired appliances through the 1980s and the 1990s. The 115 per cent increase in the cost of natural gas in the last two years unfortunately, will again make wood an attractive alternative

Soil Fauna Communities and Soil Attributes in the Agroforests of Paraty

Directory of Open Access Journals (Sweden)

Miguel Seabra Corrêa da Silva

Full Text Available ABSTRACT We conducted the present study in Paraty, southeastern Brazil, in areas under different management regimes and plant cover. The study comprised two different agroforestry systems (AFS-1 and AFS-2, a secondary forest, and a cassava monoculture. We aimed at assessing the effects of land use on the soil fauna and its relationship with soil chemical (pH, Al, Ca, Mg, P, K, carbon, and organic matter and microbiological attributes (soil microbial biomass carbon - SMB-C, soil respiration – SR, metabolic quotient - qCO2, microbial biomass carbon - C-mic. During winter, AFS-2 showed higher abundance of microphagous, saprophagous, and total individuals than the other areas. AFS-1 and the forest showed an increased abundance of Formicidae and phytophagous groups from winter to summer. The soil fauna and community structure showed that the studied agroforests are under regeneration, becoming more similar to the native forest, where ecological processes are considered efficient.

AGA predicts winter jump in residential gas price

International Nuclear Information System (INIS)

Anon.

1992-01-01

The American Gas Association predicts the average heating bill for residential gas consumers could increase by as much as 18% this winter. AGA Pres. Mike Baly said, Last year's winter was warmer than normal. If the 1992-93 winter is similar, AGA projects that residential natural gas heating bills will go up about 6%. If we see a return to normal winter weather, our projection show the average bill could rise by almost 18%

Community Structure, Biodiversity, and Ecosystem Services in Treeline Whitebark Pine Communities: Potential Impacts from a Non-Native Pathogen

Directory of Open Access Journals (Sweden)

Diana F. Tomback

2016-01-01

Full Text Available Whitebark pine (Pinus albicaulis has the largest and most northerly distribution of any white pine (Subgenus Strobus in North America, encompassing 18° latitude and 21° longitude in western mountains. Within this broad range, however, whitebark pine occurs within a narrow elevational zone, including upper subalpine and treeline forests, and functions generally as an important keystone and foundation species. In the Rocky Mountains, whitebark pine facilitates the development of krummholz conifer communities in the alpine-treeline ecotone (ATE, and thus potentially provides capacity for critical ecosystem services such as snow retention and soil stabilization. The invasive, exotic pathogen Cronartium ribicola, which causes white pine blister rust, now occurs nearly rangewide in whitebark pine communities, to their northern limits. Here, we synthesize data from 10 studies to document geographic variation in structure, conifer species, and understory plants in whitebark pine treeline communities, and examine the potential role of these communities in snow retention and regulating downstream flows. Whitebark pine mortality is predicted to alter treeline community composition, structure, and function. Whitebark pine losses in the ATE may also alter response to climate warming. Efforts to restore whitebark pine have thus far been limited to subalpine communities, particularly through planting seedlings with potential blister rust resistance. We discuss whether restoration strategies might be appropriate for treeline communities.

Paradoxes of Social Networking in a Structured Web 2.0 Language Learning Community

Science.gov (United States)

Loiseau, Mathieu; Zourou, Katerina

2012-01-01

This paper critically inquires into social networking as a set of mechanisms and associated practices developed in a structured Web 2.0 language learning community. This type of community can be roughly described as learning spaces featuring (more or less) structured language learning resources displaying at least some notions of language learning…

Community investment in wind farms: funding structure effects in wind energy infrastructure development.

Science.gov (United States)

Beery, Joshua A; Day, Jennifer E

2015-03-03

Wind energy development is an increasingly popular form of renewable energy infrastructure in rural areas. Communities generally perceive socioeconomic benefits accrue and that community funding structures are preferable to corporate structures, yet lack supporting quantitative data to inform energy policy. This study uses the Everpower wind development, to be located in Midwestern Ohio, as a hypothetical modeling environment to identify and examine socioeconomic impact trends arising from corporate, community and diversified funding structures. Analysis of five National Renewable Energy Laboratory Jobs and Economic Development Impact models incorporating local economic data and review of relevant literature were conducted. The findings suggest that community and diversified funding structures exhibit 40-100% higher socioeconomic impact levels than corporate structures. Prioritization of funding sources and retention of federal tax incentives were identified as key elements. The incorporation of local shares was found to mitigate the negative effects of foreign private equity, local debt financing increased economic output and opportunities for private equity investment were identified. The results provide the groundwork for energy policies focused to maximize socioeconomic impacts while creating opportunities for inclusive economic participation and improved social acceptance levels fundamental to the deployment of renewable energy technology.

Differential responses of nitrate reducer community size, structure, and activity to tillage systems.

Science.gov (United States)

Chèneby, D; Brauman, A; Rabary, B; Philippot, L

2009-05-01

The main objective of this study was to determine how the size, structure, and activity of the nitrate reducer community were affected by adoption of a conservative tillage system as an alternative to conventional tillage. The experimental field, established in Madagascar in 1991, consists of plots subjected to conventional tillage or direct-seeding mulch-based cropping systems (DM), both amended with three different fertilization regimes. Comparisons of size, structure, and activity of the nitrate reducer community in samples collected from the top layer in 2005 and 2006 revealed that all characteristics of this functional community were affected by the tillage system, with increased nitrate reduction activity and numbers of nitrate reducers under DM. Nitrate reduction activity was also stimulated by combined organic and mineral fertilization but not by organic fertilization alone. In contrast, both negative and positive effects of combined organic and mineral fertilization on the size of the nitrate reducer community were observed. The size of the nitrate reducer community was a significant predictor of the nitrate reduction rates except in one treatment, which highlighted the inherent complexities in understanding the relationships the between size, diversity, and structure of functional microbial communities along environmental gradients.

Seasonality and vertical structure of microbial communities in an ocean gyre

DEFF Research Database (Denmark)

Treusch, Alexander H; Vergin, Kevin L; Finlay, Liam A

2009-01-01

Vertical, seasonal and geographical patterns in ocean microbial communities have been observed in many studies, but the resolution of community dynamics has been limited by the scope of data sets, which are seldom up to the task of illuminating the highly structured and rhythmic patterns of change...

Comparing Metabolic Functionalities, Community Structures, and Dynamics of Herbicide-Degrading Communities Cultivated with Different Substrate Concentrations

DEFF Research Database (Denmark)

Gözdereliler, Erkin; Boon, Nico; Aamand, Jens

2013-01-01

Two 4-chloro-2-methylphenoxyacetic acid (MCPA)-degrading enrichment cultures selected from an aquifer on low (0.1 mg liter−1) or high (25 mg liter−1) MCPA concentrations were compared in terms of metabolic activity, community composition, population growth, and single cell physiology. Different...... community compositions and major shifts in community structure following exposure to different MCPA concentrations were observed using both 16S rRNA gene denaturing gradient gel electrophoresis fingerprinting and pyrosequencing. The communities also differed in their MCPA-mineralizing activities...... activity in cultures selected on low herbicide concentrations. This suggests that LNA bacteria may play a role in degradation of low herbicide concentrations in aquifers impacted by agriculture. This study shows that subpopulations of herbicide-degrading bacteria that are adapted to different pesticide...

Fungal Community Structure as an Indicator of Soil Agricultural Management Effects in the Cerrado

Directory of Open Access Journals (Sweden)

Alana de Almeida Valadares-Pereira

2017-11-01

Full Text Available ABSTRACT Forest-to-agriculture conversion and soil management practices for soybean cropping are frequently performed in the Cerrado (Brazilian tropical savanna. However, the effects of these practices on the soil microbial communities are still unknown. We evaluated and compared the fungal community structure in soil from soybean cropland with soil under native Cerrado vegetation at different times of the year in the Tocantins State. Soil samples were collected in two periods after planting (December and in two periods during the soybean reproductive growth stage (February. Concomitantly, soil samples were collected from an area under native Cerrado vegetation surrounding the agricultural area. The soil DNA was analyzed using a fingerprinting method termed Automated Ribosomal Intergenic Space Analysis (ARISA to assess the fungal community structure in the soil. Differences in the fungal community structure in the soil were found when comparing soybean cropland with the native vegetation (R = 0.932 for sampling 1 and R = 0.641 for sampling 2. Changes in the fungal community structure after management practices for soybean planting in Cerrado areas were related to changes in soil properties, mainly in copper, calcium, and iron contents, cation exchange capacity, base saturation, and calcium to magnesium ratio. These results show the changes in the fungal community structure in the soil as an effect of agricultural soil management in Cerrado vegetation in the state of Tocantins.

Root development of fodder radish and winter wheat before winter in relation to uptake of nitrogen

DEFF Research Database (Denmark)

Wahlström, Ellen Margrethe; Hansen, Elly Møller; Mandel, A.

2015-01-01

occurred. Quantitative data is missing on N leaching of a catch crop compared to a winter cereal in a conventional cereal-based cropping system. The aim of the study was to investigate whether fodder radish (Raphanus sativus L.) (FR) would be more efficient than winter wheat (Triticum aestivum L.) (WW...

Moonlight Drives Ocean-Scale Mass Vertical Migration of Zooplankton during the Arctic Winter.

Science.gov (United States)

Last, Kim S; Hobbs, Laura; Berge, Jørgen; Brierley, Andrew S; Cottier, Finlo

2016-01-25

In extreme high-latitude marine environments that are without solar illumination in winter, light-mediated patterns of biological migration have historically been considered non-existent [1]. However, diel vertical migration (DVM) of zooplankton has been shown to occur even during the darkest part of the polar night, when illumination levels are exceptionally low [2, 3]. This paradox is, as yet, unexplained. Here, we present evidence of an unexpected uniform behavior across the entire Arctic, in fjord, shelf, slope and open sea, where vertical migrations of zooplankton are driven by lunar illumination. A shift from solar-day (24-hr period) to lunar-day (24.8-hr period) vertical migration takes place in winter when the moon rises above the horizon. Further, mass sinking of zooplankton from the surface waters and accumulation at a depth of ∼50 m occurs every 29.5 days in winter, coincident with the periods of full moon. Moonlight may enable predation of zooplankton by carnivorous zooplankters, fish, and birds now known to feed during the polar night [4]. Although primary production is almost nil at this time, lunar vertical migration (LVM) may facilitate monthly pulses of carbon remineralization, as they occur continuously in illuminated mesopelagic systems [5], due to community respiration of carnivorous and detritivorous zooplankton. The extent of LVM during the winter suggests that the behavior is highly conserved and adaptive and therefore needs to be considered as "baseline" zooplankton activity in a changing Arctic ocean [6-9]. VIDEO ABSTRACT. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Dynamic structure of stock communities: a comparative study between stock returns and turnover rates

Science.gov (United States)

Su, Li-Ling; Jiang, Xiong-Fei; Li, Sai-Ping; Zhong, Li-Xin; Ren, Fei

2017-07-01

The detection of community structure in stock market is of theoretical and practical significance for the study of financial dynamics and portfolio risk estimation. We here study the community structures in Chinese stock markets from the aspects of both price returns and turnover rates, by using a combination of the PMFG and infomap methods based on a distance matrix. An empirical study using the overall data set shows that for both returns and turnover rates the largest communities are composed of specific industrial or conceptional sectors and the correlation inside a sector is generally larger than the correlation between different sectors. However, the community structure for turnover rates is more complex than that for returns, which indicates that the interactions between stocks revealed by turnover rates may contain more information. This conclusion is further confirmed by the analysis of the changes in the dynamics of community structures over five sub-periods. Sectors like banks, real estate, health care and New Shanghai take turns to comprise a few of the largest communities in different sub-periods, and more interestingly several specific sectors appear in the communities with different rank orders for returns and turnover rates even in the same sub-period. To better understand their differences, a comparison between the evolution of the returns and turnover rates of the stocks from these sectors is conducted. We find that stock prices only had large changes around important events while turnover rates surged after each of these events relevant to specific sectors, which shows strong evidence that the turnover rates are more susceptible to exogenous shocks than returns and its measurement for community detection may contain more useful information about market structure.

The meaning of nuclear winter

International Nuclear Information System (INIS)

Geiger, H.J.

1987-01-01

In this paper the author reviews the history and origins of the basic ideas underlying nuclear winter; and findings and predictions of several groups regarding this topic. The author reviews some of the further developments and scientific analyses regarding nuclear winter since the initial announcements of 1983, touching on some of the revisions and controversies and trying to indicate the current status of the field

Sage-grouse habitat selection during winter in Alberta

Science.gov (United States)

Carpenter, Jennifer L.; Aldridge, Cameron L.; Boyce, Mark S.

2010-01-01

Greater sage-grouse (Centrocercus urophasianus) are dependent on sagebrush (Artemisia spp.) for food and shelter during winter, yet few studies have assessed winter habitat selection, particularly at scales applicable to conservation planning. Small changes to availability of winter habitats have caused drastic reductions in some sage-grouse populations. We modeled winter habitat selection by sage-grouse in Alberta, Canada, by using a resource selection function. Our purpose was to 1) generate a robust winter habitat-selection model for Alberta sage-grouse; 2) spatially depict habitat suitability in a Geographic Information System to identify areas with a high probability of selection and thus, conservation importance; and 3) assess the relative influence of human development, including oil and gas wells, in landscape models of winter habitat selection. Terrain and vegetation characteristics, sagebrush cover, anthropogenic landscape features, and energy development were important in top Akaike's Information Criterionselected models. During winter, sage-grouse selected dense sagebrush cover and homogenous less rugged areas, and avoided energy development and 2-track truck trails. Sage-grouse avoidance of energy development highlights the need for comprehensive management strategies that maintain suitable habitats across all seasons. ?? 2010 The Wildlife Society.

The Unusual Southern Hemisphere Stratosphere Winter of 2002

Science.gov (United States)

Newman, Paul A.; Nash, Eric R.

2003-01-01

The southern hemisphere stratospheric winter of 2002 was the most unusual winter yet observed in the southern hemisphere climate record. Temperatures near the edge of the Antarctic polar vortex were considerably warmer than normal over the entire course of the winter. The polar night jet was considerably weaker than normal, and was displaced more poleward than has been observed in previous winters. These record high temperatures and weak jet resulted from a series of wave events that took place over the course of the winter. The first large event occurred on 15 May, and the final warming occurred on 25 October. The propagation of these wave events from the troposphere is diagnosed from time series of Eliassen-Palm flux vectors. The wave events tended to occur irregularly over the course of the winter, and pre-conditioned the polar night jet for the extremely large wave event of 22 September. This large wave event resulted in the first ever observed major stratospheric warming in the southern hemisphere. This wave event split the Antarctic ozone hole. The combined effect of the wave events of the 2002 winter resulted in the smallest ozone hole observed since 1988.

Microbial community dynamics and transformation of vascular plant detritus in two wetland ecosystems

International Nuclear Information System (INIS)

Moran, M.A.

1987-01-01

The microbial ecology of two wetland ecosystems in southeastern Georgia, USA, was studied with respect to microbial community dynamics and microbially-mediated transformations of vascular plant detritus. In the Okefenokee Swamp, biomass of microorganisms in the water column and sediments was generally lower in winter months and higher during spring and summer. Biomass and activity (measured as 14 C-lignocellulose mineralization) differed significantly among five habitats within the Okefenokee, and also among locations within each habitat. Significant heterogeneity in the structure of Okefenokee microbial communities was found at scales from 30 cm to 150 m. In field and laboratory studies of vascular plant decomposition in the Okefenokee and a salt marsh on Sapelo Island, the mathematical model which best describes decomposition kinetics is the decaying coefficient model

Intraspecific phytochemical variation shapes community and population structure for specialist caterpillars.

Science.gov (United States)

Glassmire, Andrea E; Jeffrey, Christopher S; Forister, Matthew L; Parchman, Thomas L; Nice, Chris C; Jahner, Joshua P; Wilson, Joseph S; Walla, Thomas R; Richards, Lora A; Smilanich, Angela M; Leonard, Michael D; Morrison, Colin R; Simbaña, Wilmer; Salagaje, Luis A; Dodson, Craig D; Miller, Jim S; Tepe, Eric J; Villamarin-Cortez, Santiago; Dyer, Lee A

2016-10-01

Chemically mediated plant-herbivore interactions contribute to the diversity of terrestrial communities and the diversification of plants and insects. While our understanding of the processes affecting community structure and evolutionary diversification has grown, few studies have investigated how trait variation shapes genetic and species diversity simultaneously in a tropical ecosystem. We investigated secondary metabolite variation among subpopulations of a single plant species, Piper kelleyi (Piperaceae), using high-performance liquid chromatography (HPLC), to understand associations between plant phytochemistry and host-specialized caterpillars in the genus Eois (Geometridae: Larentiinae) and associated parasitoid wasps and flies. In addition, we used a genotyping-by-sequencing approach to examine the genetic structure of one abundant caterpillar species, Eois encina, in relation to host phytochemical variation. We found substantive concentration differences among three major secondary metabolites, and these differences in chemistry predicted caterpillar and parasitoid community structure among host plant populations. Furthermore, E. encina populations located at high elevations were genetically different from other populations. They fed on plants containing high concentrations of prenylated benzoic acid. Thus, phytochemistry potentially shapes caterpillar and wasp community composition and geographic variation in species interactions, both of which can contribute to diversification of plants and insects. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Spatial and temporal repeatability in parasite community structure of tropical fish hosts.

Science.gov (United States)

Vidal-Martínez, V M; Poulin, R

2003-10-01

An assessment is made of the repeatability of parasite community structure in space for a marine fish, and in space and time for a freshwater fish from south-eastern Mexico. The marine fish species was the red grouper, Epinephelus morio (collected from 9 localities), and the freshwater species was the cichlid, Cichlasoma urophthalmus (collected from 6 localities: including monthly at 2 localities for 1 year, and bimonthly at 1 locality in 1990 and 1999). Pairwise interspecific associations and analyses of nested patterns in the distributions of parasite species among hosts were used in both fish species, with comparisons over time made only with the cichlid. Positive interspecific associations, and nested patterns were noted in some localities for both fish species, and/or at some sampling times for the cichlid fish. However, non-random patterns in the structure of parasite communities in these 2 host species only were observed sporadically. When present, nestedness in both fish species was apparently linked with a positive association between total infection intensities and fish size. Additionally, adjacent localities were more likely to display similar parasite community structure than distant ones. This preliminary result suggests that distance between localities is an important determinant of predictability in parasite community structure.

Large-scale structure of the middle atmosphere during the winter 1983/84

Science.gov (United States)

Petzoldt, K.

The circulation of the stratosphere and mesosphere in the winter 83/84 is shown as an example of the dynamical processes which lead to the fluctuations in the middle atmosphere over high latitudes. Winds and temperatures measured by rockets, radiosondes, and satellites during the MAP/WINE campaign are combined. The coupling of the atmosphere over high latitudes with the transient planetary waves over middle and low latitudes can be seen by the flux of wave activity. The connected eddy heat and momentum transports are essential for the interaction with the mean zonal wind.

Immunization of networks with community structure

International Nuclear Information System (INIS)

Masuda, Naoki

2009-01-01

In this study, an efficient method to immunize modular networks (i.e. networks with community structure) is proposed. The immunization of networks aims at fragmenting networks into small parts with a small number of removed nodes. Its applications include prevention of epidemic spreading, protection against intentional attacks on networks, and conservation of ecosystems. Although preferential immunization of hubs is efficient, good immunization strategies for modular networks have not been established. On the basis of an immunization strategy based on eigenvector centrality, we develop an analytical framework for immunizing modular networks. To this end, we quantify the contribution of each node to the connectivity in a coarse-grained network among modules. We verify the effectiveness of the proposed method by applying it to model and real networks with modular structure.

Improvement of the SEP protocol based on community structure of node degree

Science.gov (United States)

Li, Donglin; Wei, Suyuan

2017-05-01

Analyzing the Stable election protocol (SEP) in wireless sensor networks and aiming at the problem of inhomogeneous cluster-heads distribution and unreasonable cluster-heads selectivity and single hop transmission in the SEP, a SEP Protocol based on community structure of node degree (SEP-CSND) is proposed. In this algorithm, network node deployed by using grid deployment model, and the connection between nodes established by setting up the communication threshold. The community structure constructed by node degree, then cluster head is elected in the community structure. On the basis of SEP, the node's residual energy and node degree is added in cluster-heads election. The information is transmitted with mode of multiple hops between network nodes. The simulation experiments showed that compared to the classical LEACH and SEP, this algorithm balances the energy consumption of the entire network and significantly prolongs network lifetime.

Influence of PAHs among other coastal environmental variables on total and PAH-degrading bacterial communities.

Science.gov (United States)

Sauret, Caroline; Tedetti, Marc; Guigue, Catherine; Dumas, Chloé; Lami, Raphaël; Pujo-Pay, Mireille; Conan, Pascal; Goutx, Madeleine; Ghiglione, Jean-François

2016-03-01

We evaluated the relative impact of anthropogenic polycyclic aromatic hydrocarbons (PAHs) among biogeochemical variables on total, metabolically active, and PAH bacterial communities in summer and winter in surface microlayer (SML) and subsurface seawaters (SSW) across short transects along the NW Mediterranean coast from three harbors, one wastewater effluent, and one nearshore observatory reference site. At both seasons, significant correlations were found between dissolved total PAH concentrations and PAH-degrading bacteria that formed a gradient from the shore to nearshore waters. Accumulation of PAH degraders was particularly high in the SML, where PAHs accumulated. Harbors and wastewater outfalls influenced drastically and in a different way the total and active bacterial community structure, but they only impacted the communities from the nearshore zone (PAH concentrations on the spatial and temporal dynamic of total and active communities in this area, but this effect was putted in perspective by the importance of other biogeochemical variables.

Implementing a structured triage system at a community health ...

African Journals Online (AJOL)

Implementing a structured triage system at a community health centre using Kaizen. ... and a resultant increased workload for doctors; management is concerned ... Aim: We set out to standardise the triage process and to manage unbooked ...

Global and local targeted immunization in networks with community structure

International Nuclear Information System (INIS)

Yan, Shu; Tang, Shaoting; Pei, Sen; Zheng, Zhiming; Fang, Wenyi

2015-01-01

Immunization plays an important role in the field of epidemic spreading in complex networks. In previous studies, targeted immunization has been proved to be an effective strategy. However, when extended to networks with community structure, it is unknown whether the superior strategy is to vaccinate the nodes who have the most connections in the entire network (global strategy), or those in the original community where epidemic starts to spread (local strategy). In this work, by using both analytic approaches and simulations, we observe that the answer depends on the closeness between communities. If communities are tied closely, the global strategy is superior to the local strategy. Otherwise, the local targeted immunization is advantageous. The existence of a transitional value of closeness implies that we should adopt different strategies. Furthermore, we extend our investigation from two-community networks to multi-community networks. We consider the mode of community connection and the location of community where epidemic starts to spread. Both simulation results and theoretical predictions show that local strategy is a better option for immunization in most cases. But if the epidemic begins from a core community, global strategy is superior in some cases. (paper)

Extinction order and altered community structure rapidly disrupt ecosystem functioning.

Science.gov (United States)

Larsen, Trond H; Williams, Neal M; Kremen, Claire

2005-05-01

By causing extinctions and altering community structure, anthropogenic disturbances can disrupt processes that maintain ecosystem integrity. However, the relationship between community structure and ecosystem functioning in natural systems is poorly understood. Here we show that habitat loss appeared to disrupt ecosystem functioning by affecting extinction order, species richness and abundance. We studied pollination by bees in a mosaic of agricultural and natural habitats in California and dung burial by dung beetles on recently created islands in Venezuela. We found that large-bodied bee and beetle species tended to be both most extinction-prone and most functionally efficient, contributing to rapid functional loss. Simulations confirmed that extinction order led to greater disruption of function than predicted by random species loss. Total abundance declined with richness and also appeared to contribute to loss of function. We demonstrate conceptually and empirically how the non-random response of communities to disturbance can have unexpectedly large functional consequences.

Spatial and temporal variation in winter condition of juvenile Pacific herring (Clupea pallasii) in Prince William Sound, Alaska: Oceanographic exchange with the Gulf of Alaska

Science.gov (United States)

Gorman, Kristen B.; Kline, Thomas C.; Roberts, Megan E.; Sewall, Fletcher F.; Heintz, Ron A.; Pegau, W. Scott

2018-01-01

Spatial variability in early and late winter measures of whole body energy density of juvenile (age-0) Pacific herring (Clupea pallasii) of Prince William Sound (PWS), Alaska was examined over nine years of study. Pacific herring in this region remain considered as an injured resource over the 25 years following the Exxon Valdez oil spill, however factors responsible for the lack of recovery by herring in PWS are a source of ongoing debate. Given the species' key ecological role in energy transfer to higher predators, and its economic role in a historical commercial fishery within the region, significant research effort has focused on understanding environmental factors that shape nutritional processes and the quality of these young forage fish. During November (early winter), factors such as juvenile herring body size, hydrological region of PWS, year, and the interaction between carbon (δ13C‧) or nitrogen (δ15N) stable isotope signature and hydrological region were all important predictors of juvenile herring energy density. In particular, analyses indicated that in the northern and western regions of PWS, juvenile herring with more depleted δ13C‧ values (which reflect a Gulf of Alaska carbon source) were more energy dense. Results suggest that intrusion of water derived from the Gulf of Alaska enhances the condition of age-0 herring possibly through alterations in zooplankton community structure and abundance, particularly in the northern and western regions of PWS in the fall, which is consistent with regional circulation. During March (late winter), factors such as juvenile herring body size, year, and the interaction between δ13C‧ or δ15N isotope signature and year were all important predictors of juvenile herring energy density. Results differed for early and late winter regarding the interaction between stable isotope signatures and region or year, suggesting important seasonal aspects of circulation contribute to variation in PWS juvenile

[Principle directions for the creation and organization of the system of sanitary-epidemiological safety during the preparations for the XXII Olympic Winter Games and XI Paralympic Winter Games 2014 in Sochi].

Science.gov (United States)

Onishchenko, G G; Bragina, I V; Ezhlova, E B; Demina, V P; Gorskiĭ, A A; Gus'kov, A S; Aksenova, O I; Ivanov, G E; Klindukhov, V P; Nikolaevich, P N; Grechanaia, T B; Kulichenko, A N; Maletskaia, O V; Manin, E A; Parkhomenko, V V; Kulichenko, O A

2015-01-01

The paper generalizes the experience of formation of protection system against biological threats and ensuring sanitary and epidemiological welfare during preparation for the XXII Olympic Winter Games and XI Paralympic Winter Games of 2014 in Sochi. The basic steps for creating this system, since 2007, participation and role of Rospotrebnadzor in this process are shown. The paper deals with such questions as the governmental and administrative structures with federal agencies interaction, development of a regulatory framework governing the safety system of the Olympic Games, development of algorithms of information exchange and management decisions, biological safety in developing infrastructure in Sochi.

Seasonal variation, spatial distribution and source apportionment for polycyclic aromatic hydrocarbons (PAHs) at nineteen communities in Xi'an, China: The effects of suburban scattered emissions in winter.

Science.gov (United States)

Wang, Jingzhi; Cao, Junji; Dong, Zhibao; Guinot, Benjamin; Gao, Meiling; Huang, Rujin; Han, Yongming; Huang, Yu; Ho, Steven Sai Hang; Shen, Zhenxing

2017-12-01

Seasonal variation and spatial distribution of PM 2.5 bound polycyclic aromatic hydrocarbons (PAHs) were investigated at urban residential, commercial area, university, suburban region, and industry in Xi'an, during summer and winter time at 2013. Much higher levels of total PAHs were obtained in winter. Spatial distributions by kriging interpolations principle showed that relative high PAHs were detected in western Xi'an in both summer and winter, with decreasing trends in winter from the old city wall to the 2 nd -3rd ring road except for the suburban region and industry. Coefficients of diversity and statistics by SPSS method demonstrated that PAHs in suburban have significant differences (t winter and summer in urban, which different with the suburban. The coal combustion was the main source for PAHs in suburban region, which accounted for 46.6% in winter and sharp decreased to 19.2% in summer. Scattered emissions from uncontrolled coal combustion represent an important source of PAHs in suburban in winter and there were about 135 persons in Xi'an will suffer from lung cancer for lifetime exposure at winter levels. Further studies are needed to specify the effluence of the scattered emission in suburban to the city and to develop a strategy for controlling those emissions and lighten possible health effects. Copyright © 2017 Elsevier Ltd. All rights reserved.

Deer Wintering Areas

Data.gov (United States)

Vermont Center for Geographic Information — Deer winter habitat is critical to the long term survival of white-tailed deer (Odocoileus virginianus) in Vermont. Being near the northern extreme of the...

Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures.

Science.gov (United States)

Schloss, Patrick D; Handelsman, Jo

2006-10-01

The recent advent of tools enabling statistical inferences to be drawn from comparisons of microbial communities has enabled the focus of microbial ecology to move from characterizing biodiversity to describing the distribution of that biodiversity. Although statistical tools have been developed to compare community structures across a phylogenetic tree, we lack tools to compare the memberships and structures of two communities at a particular operational taxonomic unit (OTU) definition. Furthermore, current tests of community structure do not indicate the similarity of the communities but only report the probability of a statistical hypothesis. Here we present a computer program, SONS, which implements nonparametric estimators for the fraction and richness of OTUs shared between two communities.

Winter Insulation By Snow Accumulation in a Subarctic Treeline Ecosystem Increases Summer Carbon Cycling Rates

Science.gov (United States)

Parker, T.; Subke, J. A.; Wookey, P. A.

2014-12-01

The effect of snow accumulation on soil carbon and nutrient cycling is attracting substantial attention from researchers. We know that deeper snow accumulation caused by high stature vegetation increases winter microbial activity and therefore carbon and nitrogen flux rates. However, until now the effect of snow accumulation, by buffering winter soil temperature, on subsequent summer soil processes, has scarcely been considered. We carried out an experiment at an alpine treeline in subarctic Sweden in which soil monoliths, contained within PVC collars, were transplanted between forest (deep winter snow) and tundra heath (shallow winter snow). We measured soil CO2efflux over two growing seasons and quantified soil microbial biomass after the second winter. We showed that respiration rates of transplanted forest soil were significantly reduced compared with control collars (remaining in the forest) as a consequence of colder, but more variable, winter temperatures. We hypothesised that microbial biomass would be reduced in transplanted forests soils but found there was no difference compared to control. We therefore further hypothesised that the similarly sized microbial pool in the control is assembled differently to the transplant. We believe that the warmer winters in forests foster more active consortia of decomposer microbes as a result of different abiotic selection pressures. Using an ecosystem scale experimental approach, we have identified a mechanism that influences summer carbon cycling rates based solely on the amount of snow that accumulates the previous winter. We conclude that modification of snow depth as a consequence of changes in vegetation structure is an important mechanism influencing soil C stocks in ecosystems where snow persists for a major fraction of the year.

A structured patient identification model for medication therapy management services in a community pharmacy.

Science.gov (United States)

Pagano, Gina M; Groves, Brigid K; Kuhn, Catherine H; Porter, Kyle; Mehta, Bella H

To describe the development and implementation of a structured patient identification model for medication therapy management (MTM) services within traditional dispensing activities of a community pharmacy to facilitate pharmacist-provided completion of MTM services. A daily clinical opportunity report was developed as a structured model to identify MTM opportunities daily for all MTM-eligible patients expecting to pick up a prescription. Pharmacy staff was trained and the standardized model was implemented at study sites. One hundred nineteen grocery store-based community pharmacies throughout Ohio, West Virginia, and Michigan. A structured patient identification model in a community pharmacy consists of reviewing a clinical opportunity report, identifying interventions for MTM-eligible patients, and possibly collaborating with an interdisciplinary team. This model allows pharmacists to increase MTM cases performed by providing a structured process for identifying MTM-eligible patients and completing MTM services. The development and implementation of a structured patient identification model in the community pharmacy was completed and consists of pharmacists reviewing a clinical opportunity report to identify MTM opportunities and perform clinical interventions for patients. In a 3-month pre- and post-implementation comparison, there was a 49% increase in the number of MTM services provided by pharmacists (P < 0.001). A structured patient identification model in the community pharmacy was associated with an increase in the amount of MTM services provided by pharmacists. This method could be a useful tool at a variety of community pharmacies to solve challenges associated with MTM completion. Copyright © 2017 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.

Zooplankton composition and community structure in Lake Tiga ...

African Journals Online (AJOL)

Zooplankton in Lake Tiga was identified and its community structure assessed between March 2009 and March 2011. A total of 54 species of zooplankton was recorded, comprising two species of Protozoa, 26 species of Rotifera, eight species of Copepoda, 11 species of Cladocera, four species of Ostracoda and three ...

Stationary Planetary Waves in the Mars Winter Atmosphere as seen by the Radio Science Experiment MaRS on Mars Express

Science.gov (United States)

Tellmann, Silvia; Pätzold, Martin; Häusler, Bernd; Tyler, Leonard G.; Hinson, David P.

2015-11-01

Stationary (Rossby) Waves are excited by the interaction of the zonally varying topography with the strong eastward winter jets. They lead to distinctive longitudinal temperature variations which contribute significantly to the asymmetry of the seasonal polar CO2 ice caps and are also important for the dust redistribution in the planetary atmosphere.Radio Science profiles from the Mars Express Radio Science Experiment MaRS at northern and southern high latitudes are used to gain insight into winter stationary wave structures on both hemispheres.Mars Global Surveyor (MGS) radio occultation measurements from the same season and year with their exceptionally good longitudinal and temporal coverage can be used to estimate the influence of transient eddies. Transient waves are especially important in the northern winter hemisphere.Wave number 2 stationary waves, driven by topography, are dominant in the northern winter latitudes while the wave number 1 wave is the most significant wave number during southern winter. The wave amplitudes peak around winter solstice on both hemispheres.Radio occultation measurements provide the unique opportunity to determine simultaneous measurements of temperature and geopotential height structures. Assuming geostrophic balance, these measurements can be used to determine meridional winds and eddy heat fluxes which provide further insight into the contribution of stationary waves to the heat exchange between the poles and the lower latitudes.

Metabolic and demographic feedbacks shape the emergent spatial structure and function of microbial communities.

Directory of Open Access Journals (Sweden)

Sylvie Estrela

Full Text Available Microbes are predominantly found in surface-attached and spatially structured polymicrobial communities. Within these communities, microbial cells excrete a wide range of metabolites, setting the stage for interspecific metabolic interactions. The links, however, between metabolic and ecological interactions (functional relationships, and species spatial organization (structural relationships are still poorly understood. Here, we use an individual-based modelling framework to simulate the growth of a two-species surface-attached community where food (resource is traded for detoxification (service and investigate how metabolic constraints of individual species shape the emergent structural and functional relationships of the community. We show that strong metabolic interdependence drives the emergence of mutualism, robust interspecific mixing, and increased community productivity. Specifically, we observed a striking and highly stable emergent lineage branching pattern, generating a persistent lineage mixing that was absent when the metabolic exchange was removed. These emergent community properties are driven by demographic feedbacks, such that aid from neighbouring cells directly enhances focal cell growth, which in turn feeds back to neighbour fecundity. In contrast, weak metabolic interdependence drives conflict (exploitation or competition, and in turn greater interspecific segregation. Together, these results support the idea that species structural and functional relationships represent the net balance of metabolic interdependencies.

Basin-scale seasonal changes in marine free-living bacterioplankton community in the Ofunato Bay

KAUST Repository

Reza, Md. Shaheed

2018-04-26

The Ofunato Bay in the northeastern Pacific Ocean area of Japan possesses the highest biodiversity of marine organisms in the world and has attracted much attention due to its economic and environmental importance. We report here a shotgun metagenomic analysis of the year-round variation in free-living bacterioplankton collected across the entire length of the bay. Phylogenetic differences among spring, summer, autumn and winter bacterioplankton suggested that members of Proteobacteria tended to decrease at high water temperatures and increase at low temperatures. It was revealed that Candidatus Pelagibacter varied seasonally, reaching as much as 60% of all sequences at the genus level in the surface waters during winter. This increase was more evident in the deeper waters, where they reached up to 75%. The relative abundance of Planktomarina also rose during winter and fell during summer. A significant component of the winter bacterioplankton community was Archaea (mainly represented by Nitrosopumilus), as their relative abundance was very low during spring and summer but high during winter. In contrast, Actinobacteria and Cyanobacteria appeared to be higher in abundance during high-temperature periods. It was also revealed that Bacteroidetes constituted a significant component of the summer bacterioplankton community, being the second largest bacterial phylum detected in the Ofunato Bay. Its members, notably Polaribacter and Flavobacterium, were found to be high in abundance during spring and summer, particularly in the surface waters. Principal component analysis and hierarchal clustering analyses showed that the bacterial communities in the Ofunato Bay changed seasonally, likely caused by the levels of organic matter, which would be deeply mixed with surface runoff in the winter.

Chapter 7: Migration and winter ecology

Science.gov (United States)

Deborah M. Finch; Jeffrey F. Kelly; Jean-Luc E. Cartron

2000-01-01

The willow flycatcher (Empidonax traillii) is a Neotropical migrant that breeds in North America, but winters in Central and northern South America. Little specific information is known about migration and wintering ecology of the southwestern willow flycatcher (E. t. extimus) (Yong and Finch 1997). Our report applies principally...

Community structure of elasmobranchs in estuaries along the northwest Gulf of Mexico

Science.gov (United States)

Plumlee, Jeffrey D.; Dance, Kaylan M.; Matich, Philip; Mohan, John A.; Richards, Travis M.; TinHan, Thomas C.; Fisher, Mark R.; Wells, R. J. David

2018-05-01

Estuaries promote high levels of productivity and biodiversity by providing habitat for many biological communities due to their wide range of environmental conditions. Estuarine systems serve as nurseries, areas for parturition, and feeding grounds for elasmobranchs. However, estuaries face an array of anthropogenic pressures, including overfishing, altered flow regimes, pollution, and habitat destruction. Given the vulnerability of estuarine ecosystems, observing long-term changes in community structure is essential to understanding the effects of anthropogenic stressors. Elasmobranch community structure was analyzed among eight estuaries in the northwest Gulf of Mexico to evaluate spatial and temporal variability in species abundance and diversity using bi-annual fisheries independent gillnet survey data over three decades (1985-2014). Ten species comprised 99.4% of elasmobranchs caught which included 35.3% bull sharks (Carcharhinus leucas), 18.1% bonnetheads (Sphyrna tiburo), 17.0% cownose rays (Rhinoptera bonasus), 13.4% blacktip sharks (Carcharhinus limbatus), 5.9% Atlantic stingrays (Dasyatis sabina), 3.1% Atlantic sharpnose sharks (Rhizoprionodon terraenovae), 2.7% spinner sharks (Carcharhinus brevipinna), 2.1% scalloped hammerheads (Sphyrna lewini), 1.7% finetooth sharks (Carcharhinus isodon), and 0.7% lemon sharks (Negaprion brevirostris). During the study period, elasmobranch community structure changed among estuaries and among decades. Bull sharks, bonnetheads, cownose rays, blacktip sharks, and spinner sharks all increased in abundance during the study period, whereas finetooth sharks and lemon sharks decreased over time. Higher latitude estuaries were dominated by bull sharks while lower latitude estuaries were dominated by cownose rays. Salinity was the most important environmental variable in predicting individual elasmobranch species abundance (deviance explained: 14.4 ± 6.5 SD), while temperature and depth also played a role in shaping community

Bacterial community structure in experimental methanogenic bioreactors and search for pathogenic clostridia as community members.

Science.gov (United States)

Dohrmann, Anja B; Baumert, Susann; Klingebiel, Lars; Weiland, Peter; Tebbe, Christoph C

2011-03-01

Microbial conversion of organic waste or harvested plant material into biogas has become an attractive technology for energy production. Biogas is produced in reactors under anaerobic conditions by a consortium of microorganisms which commonly include bacteria of the genus Clostridium. Since the genus Clostridium also harbors some highly pathogenic members in its phylogenetic cluster I, there has been some concern that an unintended growth of such pathogens might occur during the fermentation process. Therefore this study aimed to follow how process parameters affect the diversity of Bacteria in general, and the diversity of Clostridium cluster I members in particular. The development of both communities was followed in model biogas reactors from start-up during stable methanogenic conditions. The biogas reactors were run with either cattle or pig manures as substrates, and both were operated at mesophilic and thermophilic conditions. The structural diversity was analyzed independent of cultivation using a PCR-based detection of 16S rRNA genes and genetic profiling by single-strand conformation polymorphism (SSCP). Genetic profiles indicated that both bacterial and clostridial communities evolved in parallel, and the community structures were highly influenced by both substrate and temperature. Sequence analysis of 16S rRNA genes recovered from prominent bands from SSCP profiles representing Clostridia detected no pathogenic species. Thus, this study gave no indication that pathogenic clostridia would be enriched as dominant community members in biogas reactors fed with manure.

Microbial community structure of leaf-cutter ant fungus gardens and refuse dumps.

Science.gov (United States)

Scott, Jarrod J; Budsberg, Kevin J; Suen, Garret; Wixon, Devin L; Balser, Teri C; Currie, Cameron R

2010-03-29

Leaf-cutter ants use fresh plant material to grow a mutualistic fungus that serves as the ants' primary food source. Within fungus gardens, various plant compounds are metabolized and transformed into nutrients suitable for ant consumption. This symbiotic association produces a large amount of refuse consisting primarily of partly degraded plant material. A leaf-cutter ant colony is thus divided into two spatially and chemically distinct environments that together represent a plant biomass degradation gradient. Little is known about the microbial community structure in gardens and dumps or variation between lab and field colonies. Using microbial membrane lipid analysis and a variety of community metrics, we assessed and compared the microbiota of fungus gardens and refuse dumps from both laboratory-maintained and field-collected colonies. We found that gardens contained a diverse and consistent community of microbes, dominated by Gram-negative bacteria, particularly gamma-Proteobacteria and Bacteroidetes. These findings were consistent across lab and field gardens, as well as host ant taxa. In contrast, dumps were enriched for Gram-positive and anaerobic bacteria. Broad-scale clustering analyses revealed that community relatedness between samples reflected system component (gardens/dumps) rather than colony source (lab/field). At finer scales samples clustered according to colony source. Here we report the first comparative analysis of the microbiota from leaf-cutter ant colonies. Our work reveals the presence of two distinct communities: one in the fungus garden and the other in the refuse dump. Though we find some effect of colony source on community structure, our data indicate the presence of consistently associated microbes within gardens and dumps. Substrate composition and system component appear to be the most important factor in structuring the microbial communities. These results thus suggest that resident communities are shaped by the plant degradation

Impacts of chemical gradients on microbial community structure

DEFF Research Database (Denmark)

Chen, Jianwei; Hanke, Anna; Tegetmeyer, Halina E

2017-01-01

Succession of redox processes is sometimes assumed to define a basic microbial community structure for ecosystems with oxygen gradients. In this paradigm, aerobic respiration, denitrification, fermentation and sulfate reduction proceed in a thermodynamically determined order, known as the 'redox ...... Journal advance online publication, 17 January 2017; doi:10.1038/ismej.2016.175....

Interspecific competition and the structure of bird guilds in boreal Europe: the importance of doing fieldwork in the right season.

Science.gov (United States)

Oksanen, L

1987-12-01

Bird studies have gained a central role in the debate on the importance of interspecific competition in nature. Thus, the negative results reported from a breeding bird community in a North American shrubsteppe area have created ripples throughout community ecology. However, the set of coexisting breeding birds might be an inappropriate operational definition of a bird community, because the intensity of interspecific competition can be expected to peak in autumn-winter. A review of North European data on wintering birds suggests that the case for the competition theory remains strong when bird communities are defined on the basis of winter coexistence. Copyright © 1987. Published by Elsevier Ltd.

Autumn Weather and Winter Increase in Cerebrovascular Disease Mortality

LENUS (Irish Health Repository)

McDonagh, R

2016-11-01

Mortality from cerebrovascular disease increases in winter but the cause is unclear. Ireland’s oceanic climate means that it infrequently experiences extremes of weather. We examined how weather patterns relate to stroke mortality in Ireland. Seasonal data for Sunshine (% of average), Rainfall (% of average) and Temperature (degrees Celsius above average) were collected for autumn (September-November) and winter (December-February) using official Irish Meteorological Office data. National cerebrovascular mortality data was obtained from Quarterly Vital Statistics. Excess winter deaths were calculated by subtracting (nadir) 3rd quarter mortality data from subsequent 1st quarter data. Data for 12 years were analysed, 2002-2014. Mean winter mortality excess was 24.7%. Winter mortality correlated with temperature (r=.60, p=0.04). Rise in winter mortality correlated strongly with the weather in the preceding autumn (Rainfall: r=-0.19 p=0.53, Temperature: r=-0.60, p=0.03, Sunshine, r=0.58, p=0.04). Winter cerebrovascular disease mortality appears higher following cool, sunny autum

Analysis of bacterial and fungal community structure in replant ...

African Journals Online (AJOL)

user

2012-06-19

Jun 19, 2012 ... roots and few functional root hairs. Normally, RDS is ... community structure of microbes, including microbes as yet unable to be cultured. ..... Due to the fact that. Method 3 in this paper has the advantages in combining.

Winter climate variability and classification in the Bulgarian Mountainous Regions

International Nuclear Information System (INIS)

Petkova, Nadezhda; Koleva, Ekaterina

2004-01-01

The problems of snowiness and thermal conditions of winters are of high interest of investigations because of the more frequent droughts, occurred in the region. In the present study an attempt to reveal tendencies existing during the last 70 years of 20 th century in the course winter precipitation and,temperature as well as in some of the snow cover parameters. On the base of mean winter air temperature winters in the Bulgarian mountains were analyzed and classified. The main results of the study show that winter precipitation has decrease tendencies more significant in the highest parts of the mountains. On the other hand winter air temperature increases. It shows a relatively well-established maximum at the end of the studied period. In the Bulgarian mountains normal winters are about 35-40% of all winters. (Author)

Interim Report 'Winter smog and traffic'.

NARCIS (Netherlands)

Bloemen, H.; Blom, T.; Bogaard, van den C.; Boluyt, N.; Bree, van L.; Brunekreef, B.; Hoek, G.; Zee, van der S.

1994-01-01

This report presents a halfway score of the research project "Winter smog and Traffic", one of the themes of the research programme "Air Pollution and Health". A state of the art is presented of the health effects associated with exposure to winter smog and of the toxicological effects caused by the

Home advantage in the Winter Paralympic Games 1976-2014.

Science.gov (United States)

Wilson, Darryl; Ramchandani, Girish

2017-01-01

There is a limited amount of home advantage research concerned with winter sports. There is also a distinct lack of studies that investigate home advantage in the context of para sport events. This paper addresses this gap in the knowledge by examining home advantage in the Winter Paralympic Games. Using a standardised measure of success, we compared the performances of host nations at home with their own performances away from home between 1976 and 2014. Both country level and individual sport level analysis is conducted for this time period. Comparisons are also drawn with the Winter Olympic Games since 1992, the point from which both the Winter Olympic Games and the Winter Paralympic Games have been hosted by the same nations and in the same years. Clear evidence of a home advantage effect in the Winter Paralympic Games was found at country level. When examining individual sports, only alpine skiing and cross country skiing returned a significant home advantage effect. When comparing home advantage in the Winter Paralympic Games with the Winter Olympic Games for the last seven host nations (1992-2014), we found that home advantage was generally more pronounced (although not a statistically significant difference) in the case of the former. The causes of home advantage in the Winter Paralympic Games are unclear and should be investigated further.

Earthworms modify microbial community structure and accelerate maize stover decomposition during vermicomposting.

Science.gov (United States)

Chen, Yuxiang; Zhang, Yufen; Zhang, Quanguo; Xu, Lixin; Li, Ran; Luo, Xiaopei; Zhang, Xin; Tong, Jin

2015-11-01

In the present study, maize stover was vermicomposted with the epigeic earthworm Eisenia fetida. The results showed that, during vermicomposting process, the earthworms promoted decomposition of maize stover. Analysis of microbial communities of the vermicompost by high-throughput pyrosequencing showed more complex bacterial community structure in the substrate treated by the earthworms than that in the control group. The dominant microbial genera in the treatment with the earthworms were Pseudoxanthomonas, Pseudomonas, Arthrobacter, Streptomyces, Cryptococcus, Guehomyces, and Mucor. Compared to the control group, the relative abundance of lignocellulose degradation microorganisms increased. The results indicated that the earthworms modified the structure of microbial communities during vermicomposting process, activated the growth of lignocellulose degradation microorganisms, and triggered the lignocellulose decomposition.

Real-time weed detection, decision making and patch spraying in maize, sugarbeet, winter wheat and winter barley

DEFF Research Database (Denmark)

Gerhards, R; Christensen, Svend

2003-01-01

with weed infestation levels higher than the economic weed threshold; a review of such work is provided. This paper presents a system for site-specific weed control in sugarbeet (Beta vulgaris L.), maize (Zea mays L.), winter wheat (Triticum aestivum L.) and winter barley (Hordeum vulgare L.), including...

Characterizing changes in soil bacterial community structure in response to short-term warming

Energy Technology Data Exchange (ETDEWEB)

Xiong, Jinbo [State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing China; School of Marine Sciences, Ningbo University, Ningbo China; Sun, Huaibo [State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing China; Peng, Fei [Key Laboratory of Desert and Desertification, Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences, Lanzhou China; Zhang, Huayong [State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing China; Xue, Xian [Key Laboratory of Desert and Desertification, Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences, Lanzhou China; Gibbons, Sean M. [Argonne National Laboratory Biosciences Division, Argonne IL USA; Graduate Program in Biophysical Sciences, University of Chicago, Chicago IL USA; Gilbert, Jack A. [Argonne National Laboratory Biosciences Division, Argonne IL USA; Department of Ecology and Evolution, University of Chicago, Chicago IL USA; Chu, Haiyan [State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing China

2014-02-18

High altitude alpine meadows are experiencing considerably greater than average increases in soil surface temperature, potentially as a result of ongoing climate change. The effects of warming on plant productivity and soil edaphic variables have been established previously, but the influence of warming on soil microbial community structure has not been well characterized. Here, the impact of 15 months of soil warming (both + 1 and + 2 degrees C) on bacterial community structure was examined in a field experiment on a Tibetan plateau alpine meadow using bar-coded pyrosequencing. Warming significantly changed (P < 0.05) the structure of the soil bacterial community, but the alpha diversity was not dramatically affected. Changes in the abundance of the Actinobacteria and Alphaproteobacteria were found to contribute the most to differences between ambient (AT) and artificially warmed conditions. A variance partitioning analysis (VPA) showed that warming directly explained 7.15% variation in bacterial community structure, while warming-induced changes in soil edaphic and plant phenotypic properties indirectly accounted for 28.3% and 20.6% of the community variance, respectively. Interestingly, certain taxa showed an inconsistent response to the two warming treatments, for example Deltaproteobacteria showed a decreased relative abundance at + 1 degrees C, but a return to AT control relative abundance at + 2 degrees C. This suggests complex microbial dynamics that could result from conditional dependencies between bacterial taxa.

Microbes as engines of ecosystem function: when does community structure enhance predictions of ecosystem processes?

Directory of Open Access Journals (Sweden)

Emily B. Graham

2016-02-01

Full Text Available Microorganisms are vital in mediating the earth’s biogeochemical cycles; yet, despite our rapidly increasing ability to explore complex environmental microbial communities, the relationship between microbial community structure and ecosystem processes remains poorly understood. Here, we address a fundamental and unanswered question in microbial ecology: ‘When do we need to understand microbial community structure to accurately predict function?’ We present a statistical analysis investigating the value of environmental data and microbial community structure independently and in combination for explaining rates of carbon and nitrogen cycling processes within 82 global datasets. Environmental variables were the strongest predictors of process rates but left 44% of variation unexplained on average, suggesting the potential for microbial data to increase model accuracy. Although only 29% of our datasets were significantly improved by adding information on microbial community structure, we observed improvement in models of processes mediated by narrow phylogenetic guilds via functional gene data, and conversely, improvement in models of facultative microbial processes via community diversity metrics. Our results also suggest that microbial diversity can strengthen predictions of respiration rates beyond microbial biomass parameters, as 53% of models were improved by incorporating both sets of predictors compared to 35% by microbial biomass alone. Our analysis represents the first comprehensive analysis of research examining links between microbial community structure and ecosystem function. Taken together, our results indicate that a greater understanding of microbial communities informed by ecological principles may enhance our ability to predict ecosystem process rates relative to assessments based on environmental variables and microbial physiology.

Warmed Winter Water Temperatures Alter Reproduction in Two Fish Species

Science.gov (United States)

Firkus, Tyler; Rahel, Frank J.; Bergman, Harold L.; Cherrington, Brian D.

2018-02-01

We examined the spawning success of Fathead Minnows ( Pimephales promelas) and Johnny Darters ( Etheostoma nigrum) exposed to elevated winter water temperatures typical of streams characterized by anthropogenic thermal inputs. When Fathead Minnows were exposed to temperature treatments of 12, 16, or 20 °C during the winter, spawning occurred at 16 and 20 °C but not 12 °C. Eggs were deposited over 9 weeks before winter spawning ceased. Fathead Minnows from the three winter temperature treatments were then exposed to a simulated spring transition. Spawning occurred at all three temperature treatments during the spring, but fish from the 16° and 20 °C treatment had delayed egg production indicating a latent effect of warm winter temperatures on spring spawning. mRNA analysis of the egg yolk protein vitellogenin showed elevated expression in female Fathead Minnows at 16 and 20 °C during winter spawning that decreased after winter spawning ceased, whereas Fathead Minnows at 12 °C maintained comparatively low expression during winter. Johnny Darters were exposed to 4 °C to represent winter temperatures in the absence of thermal inputs, and 12, 16, and 20 °C to represent varying degrees of winter thermal pollution. Johnny Darters spawned during winter at 12, 16, and 20 °C but not at 4 °C. Johnny Darters at 4 °C subsequently spawned following a simulated spring period while those at 12, 16, and 20 °C did not. Our results indicate elevated winter water temperatures common in effluent-dominated streams can promote out-of-season spawning and that vitellogenin expression is a useful indicator of spawning readiness for fish exposed to elevated winter temperatures.

Winter barley mutants created in the Ukraine

International Nuclear Information System (INIS)

Zayats, O.M.

2001-01-01

Full text: Increasing fodder and protein production is one of the objectives of the development of agriculture in Ukraine. Higher productivity of fodder crops, due to new highly productive varieties, is the means to meet this aim. Winter barley is an important crop for fodder purposes. The climate of the Ukraine is favourable for growing this crop. The areas used for the growth of winter barley are however, small (500,000-550,000 ha) and there is a shortage of good quality varieties. The main aim of the work was therefore to create new varieties of highly productive winter barley, of good quality. The new varieties and mutation lines of winter barley were created under the influence of water solutions of N-nitroso-N-methylurea (NMH - 0,012, 0,005%), N-nitroso-N-ethylurea (NEH - 0,05; 0.025; 0,012%) ethyleneimine (EI - 0,02; 0,01; 0,005%) on winter barley seeds of the varieties of local and foreign selections. On the basis of many years of investigations (1984-94) the following mutations were described: hard-grained, winter-hardiness, earliness, middle-maturity, late-maturity, wide and large leaves, narrow leaves, multinodal, great number of leaves, great number of flowers, strong stem (lodging resistant), tallness, semi-dwarfness, dwarfness, and high productivity. Particularly valuable are mutants with high productivity of green bulk. Their potential yield is 70 t/ha. As a result of the work two varieties of winter barley 'Shyrokolysty' and 'Kormovy' were released into the State register of plant varieties of the Ukraine. The other valuable mutant genotypes are used in cross breeding programmes. (author)

Impacts of winter NPO on subsequent winter ENSO: sensitivity to the definition of NPO index

Science.gov (United States)

Chen, Shangfeng; Wu, Renguang

2018-01-01

This study investigates the linkage between boreal winter North Pacific Oscillation (NPO) and subsequent winter El Niño-Southern Oscillation (ENSO) based on seven different NPO indices. Results show that the influence of winter NPO on the subsequent winter El Niño is sensitive to how the NPO is defined. A significant NPO-El Niño connection is obtained when the NPO-related anomalous cyclone over the subtropical North Pacific extends to near-equatorial regions. The anomalous cyclone induces warm sea surface temperature (SST) anomalies through modulating surface heat fluxes. These warm SST anomalies are able to maintain into the following spring and summer through an air-sea coupled process and in turn induce significant westerly wind anomalies over the tropical western Pacific. In contrast, the NPO-El Niño relationship is unclear when the NPO-related anomalous cyclone over the subtropical North Pacific is confined to off-equatorial regions and cannot induce significant warm SST anomalies over the subtropical North Pacific. The present study suggests that definitions of NPO should be taken into account when using NPO to predict ENSO. In particular, we recommend defining the NPO index based on the empirical orthogonal function technique over appropriate region that does not extend too far north.

Investigating the link between fish community structure and environmental state in deep-time

Science.gov (United States)

Sibert, E. C.

2017-12-01

In the modern ocean, a bottom-up ecological viewpoint posits that the composition of plankton communities is often a function of ambient oceanographic conditions, including nutrient concentrations and water temperature. Thus, certain plankton species or communities can be associated with specific oceanographic conditions, giving them potential as carriers of paleoceanographic information. Furthermore, consumer groups, such as fish, depend on the structure and composition of these plankton, and therefore different plankton communities will support different types of fish. In addition, fish have their own physiological constraints for surviving in particular environments, such as oxygen demand, and metabolic rate, causing certain clades to be selectively associated with different water mass characteristics. Thus, the relative or absolute abundances of different fish species or groups could shed light on shifting oxygen concentrations, temperature, or primary productivity in the past. To assess whether fish communities have sufficient environmental control to provide paleoceanographic insights, I use a variety of morphological, phylogenetic, and ecological statistical approaches, to correlate modern fish communities from around the world with environmental variables. I then apply these principles to a series of ichthyolith assemblages from the Cretaceous and Cenozoic, across both space and time, to assess whether fish community composition, abundance, or other characteristics can be predictive of ocean temperature or export productivity. I find that while the abundance of fish fossils in deep-sea cores is often, though not always, correlated with certain export production and temperature proxies, community composition appears to vary independently of these variables on long timescales, driven more by evolutionary processes. However, there are distinct differences in contemporary communities in different locations, suggesting that there is potential in using fish

Excess mortality in winter in Finnish intensive care.

Science.gov (United States)

Reinikainen, M; Uusaro, A; Ruokonen, E; Niskanen, M

2006-07-01

In the general population, mortality from acute myocardial infarctions, strokes and respiratory causes is increased in winter. The winter climate in Finland is harsh. The aim of this study was to find out whether there are seasonal variations in mortality rates in Finnish intensive care units (ICUs). We analysed data on 31,040 patients treated in 18 Finnish ICUs. We measured severity of illness with acute physiology and chronic health evaluation II (APACHE II) scores and intensity of care with therapeutic intervention scoring system (TISS) scores. We assessed mortality rates in different months and seasons and used logistic regression analysis to test the independent effect of various seasons on hospital mortality. We defined 'winter' as the period from December to February, inclusive. The crude hospital mortality rate was 17.9% in winter and 16.4% in non-winter, P = 0.003. Even after adjustment for case mix, winter season was an independent risk factor for increased hospital mortality (adjusted odds ratio 1.13, 95% confidence interval 1.04-1.22, P = 0.005). In particular, the risk of respiratory failure was increased in winter. Crude hospital mortality was increased during the main holiday season in July. However, the severity of illness-adjusted risk of death was not higher in July than in other months. An increase in the mean daily TISS score was an independent predictor of increased hospital mortality. Severity of illness-adjusted hospital mortality for Finnish ICU patients is higher in winter than in other seasons.

Seasonal variation of zooplankton abundance and community structure in Prince William Sound, Alaska, 2009-2016

Science.gov (United States)

McKinstry, Caitlin A. E.; Campbell, Robert W.

2018-01-01

Large calanoid copepods and other zooplankters comprise the prey field for ecologically and economically important predators such as juvenile pink salmon, herring, and seabirds in Prince William Sound (PWS).​ From 2009-2016, the Gulf Watch Alaska program collected zooplankton 5-10 times each year at 12 stations in PWS to establish annual patterns. Surveys collected 188 species of zooplankton with Oithona similis, Limacina helicina, Pseudocalanus spp., and Acartia longiremis as the most common species present in 519 samples. Generalized additive models assessed seasonal abundance and showed peak abundance in July (mean: 9826 no. m-3 [95% CI: 7990-12,084]) and lowest abundance in January (503 no. m-3 [373 to 678]). Significantly higher zooplankton abundance occurred in 2010 (542 no. m-3 ± 55 SE) and lowest in 2013 (149 no. m-3 ± 13). The species composition of communities, determined via hierarchical cluster analysis and indicator species analysis, produced six distinct communities based on season and location. The winter community, characterized by warm-water indicator species including Mesocalanus tenuicornis, Calanus pacificus, and Corycaeus anglicus, diverged into four communities throughout the spring and summer. The first spring community, characterized by copepods with affinities for lower salinities, occurred sound-wide. The second spring community, comprised of planktonic larvae, appeared sporadically in PWS bays in 2011-2013. Spring and summer open water stations were defined by the presence of large calanoid copepods. A summer community including the most abundant taxa was common in 2010 and 2011, absent in 2013, then sporadically appeared in 2014 and 2015 suggesting interannual variability of zooplankton assemblages. The zooplankton community shifted to a uniform assemblage characterized by cnidarians in the early autumn. Community assemblages showed significant correlations to a set of environmental variables including SST, mixed layer depth

Essential Outdoor Sun Safety Tips for Winter

Science.gov (United States)

... Weekend Warriors expand/collapse Vitamin D Essential Outdoor Sun Safety Tips for Winter Winter sports enthusiasts are ... skiing! Be Mindful of Time Spent in the Sun, Regardless of the Season If possible, ski early ...

Bulimia and anorexia nervosa in winter depression: lifetime rates in a clinical sample.

Science.gov (United States)

Gruber, N P; Dilsaver, S C

1996-01-01

Symptoms of an eating disorder (hyperphagia, carbohydrate craving, and weight gain) are characteristic of wintertime depression. Recent findings suggest that the severity of bulimia nervosa peaks during fall and winter months, and that persons with this disorder respond to treatment with bright artificial light. However, the rates of eating disorders among patients presenting for the treatment of winter depression are unknown. This study was undertaken to determine these rates among 47 patients meeting the DSM-III-R criteria for major depression with a seasonal pattern. All were evaluated using standard clinical interviews and the Structured Clinical Interview for DSM-III-R. Twelve (25.5%) patients met the DSM-III-R criteria for an eating disorder. Eleven patients had onset of mood disorder during childhood or adolescence. The eating disorder followed the onset of the mood disorder. Clinicians should inquire about current and past symptoms of eating disorders when evaluating patients with winter depression. PMID:8580121

Competition for space and the structure of ecological communities

CERN Document Server

Yodzis, Peter

1978-01-01

This volume is an investigation of interspecific competition for space, particularly among sessile organisms, both plant and animal, and its consequences for community structure. While my own contribu­ tion ----and the bulk of this volume --- lies in mathematical analysis of the phenomenon, I have also tried to summarize the most important natural historical aspects of these communities, and have devoted much effort to relating the mathematical results to observations of the natural world. Thus, the volume has both a synthetic and an analytic aspect. On the one hand, I have been struck by certain similarities among many communities, from forests to mussel beds, in which spatial com­ petition is important. On the other hand, I have analyzed this pheno­ menon by means of reaction-dispersal models. Finally, the mathematical analysis has suggested a conceptual framework for these communities which, I believe, further unifies and illuminates the field data. A focal perception of this work is that, just as niche...

Temporal change in biological community structure in the Fountain Creek basin, Colorado, 2001-2008

Science.gov (United States)

Zuellig, Robert E.; Bruce, James F.; Stogner, Sr., Robert W.

2010-01-01

In 2001, the U.S. Geological Survey, in cooperation with Colorado Springs City Engineering, began a study to better understand the relations between environmental characteristics and biological communities in the Fountain Creek basin in order to aide water-resource management and guide future monitoring activities. To accomplish this task, environmental (streamflow, habitat, and water chemistry) and biological (fish and macroinvertebrate) data were collected annually at 24 sites over a 6- or 8-year period (fish, 2003 to 2008; macroinvertebrates, 2001 to 2008). For this report, these data were first analyzed to determine the presence of temporal change in macroinvertebrate and fish community structure among years using nonparametric multivariate statistics. Where temporal change in the biological communities was found, these data were further analyzed using additional nonparametric multivariate techniques to determine which subset of selected streamflow, habitat, or water-chemistry variables best described site-specific changes in community structure relative to a gradient of urbanization. This study identified significant directional patterns of temporal change in macroinvertebrate and fish community structure at 15 of 24 sites in the Fountain Creek basin. At four of these sites, changes in environmental variables were significantly correlated with the concurrent temporal change identified in macroinvertebrate and fish community structure (Monument Creek above Woodmen Road at Colorado Springs, Colo.; Monument Creek at Bijou Street at Colorado Springs, Colo.; Bear Creek near Colorado Springs, Colo.; Fountain Creek at Security, Colo.). Combinations of environmental variables describing directional temporal change in the biota appeared to be site specific as no single variable dominated the results; however, substrate composition variables (percent substrate composition composed of sand, gravel, or cobble) collectively were present in 80 percent of the environmental

Traveling salesman problems with PageRank Distance on complex networks reveal community structure

Science.gov (United States)

Jiang, Zhongzhou; Liu, Jing; Wang, Shuai

2016-12-01

In this paper, we propose a new algorithm for community detection problems (CDPs) based on traveling salesman problems (TSPs), labeled as TSP-CDA. Since TSPs need to find a tour with minimum cost, cities close to each other are usually clustered in the tour. This inspired us to model CDPs as TSPs by taking each vertex as a city. Then, in the final tour, the vertices in the same community tend to cluster together, and the community structure can be obtained by cutting the tour into a couple of paths. There are two challenges. The first is to define a suitable distance between each pair of vertices which can reflect the probability that they belong to the same community. The second is to design a suitable strategy to cut the final tour into paths which can form communities. In TSP-CDA, we deal with these two challenges by defining a PageRank Distance and an automatic threshold-based cutting strategy. The PageRank Distance is designed with the intrinsic properties of CDPs in mind, and can be calculated efficiently. In the experiments, benchmark networks with 1000-10,000 nodes and varying structures are used to test the performance of TSP-CDA. A comparison is also made between TSP-CDA and two well-established community detection algorithms. The results show that TSP-CDA can find accurate community structure efficiently and outperforms the two existing algorithms.

Exploring anti-community structure in networks with application to incompatibility of traditional Chinese medicine

Science.gov (United States)

Zhu, Jiajing; Liu, Yongguo; Zhang, Yun; Liu, Xiaofeng; Xiao, Yonghua; Wang, Shidong; Wu, Xindong

2017-11-01

Community structure is one of the most important properties in networks, in which a node shares its most connections with the others in the same community. On the contrary, the anti-community structure means the nodes in the same group have few or no connections with each other. In Traditional Chinese Medicine (TCM), the incompatibility problem of herbs is a challenge to the clinical medication safety. In this paper, we propose a new anti-community detection algorithm, Random non-nEighboring nOde expansioN (REON), to find anti-communities in networks, in which a new evaluation criterion, anti-modularity, is designed to measure the quality of the obtained anti-community structure. In order to establish anti-communities in REON, we expand the node set by non-neighboring node expansion and regard the node set with the highest anti-modularity as an anti-community. Inspired by the phenomenon that the node with higher degree has greater contribution to the anti-modularity, an improved algorithm called REONI is developed by expanding node set by the non-neighboring node with the maximum degree, which greatly enhances the efficiency of REON. Experiments on synthetic and real-world networks demonstrate the superiority of the proposed algorithms over the existing methods. In addition, by applying REONI to the herb network, we find that it can discover incompatible herb combinations.

Eigenspaces of networks reveal the overlapping and hierarchical community structure more precisely

International Nuclear Information System (INIS)

Ma, Xiaoke; Gao, Lin; Yong, Xuerong

2010-01-01

Identifying community structure is fundamental for revealing the structure–functionality relationship in complex networks, and spectral algorithms have been shown to be powerful for this purpose. In a traditional spectral algorithm, each vertex of a network is embedded into a spectral space by making use of the eigenvectors of the adjacency matrix or Laplacian matrix of the graph. In this paper, a novel spectral approach for revealing the overlapping and hierarchical community structure of complex networks is proposed by not only using the eigenvalues and eigenvectors but also the properties of eigenspaces of the networks involved. This gives us a better characterization of community. We first show that the communicability between a pair of vertices can be rewritten in term of eigenspaces of a network. An agglomerative clustering algorithm is then presented to discover the hierarchical communities using the communicability matrix. Finally, these overlapping vertices are discovered with the corresponding eigenspaces, based on the fact that the vertices more densely connected amongst one another are more likely to be linked through short cycles. Compared with the traditional spectral algorithms, our algorithm can identify both the overlapping and hierarchical community without increasing the time complexity O(n 3 ), where n is the size of the network. Furthermore, our algorithm can also distinguish the overlapping vertices from bridges. The method is tested by applying it to some computer-generated and real-world networks. The experimental results indicate that our algorithm can reveal community structure more precisely than the traditional spectral approaches

Winter Season Mortality: Will Climate Warming Bring Benefits?

Science.gov (United States)

Kinney, Patrick L; Schwartz, Joel; Pascal, Mathilde; Petkova, Elisaveta; Tertre, Alain Le; Medina, Sylvia; Vautard, Robert

2015-06-01

Extreme heat events are associated with spikes in mortality, yet death rates are on average highest during the coldest months of the year. Under the assumption that most winter excess mortality is due to cold temperature, many previous studies have concluded that winter mortality will substantially decline in a warming climate. We analyzed whether and to what extent cold temperatures are associated with excess winter mortality across multiple cities and over multiple years within individual cities, using daily temperature and mortality data from 36 US cities (1985-2006) and 3 French cities (1971-2007). Comparing across cities, we found that excess winter mortality did not depend on seasonal temperature range, and was no lower in warmer vs. colder cities, suggesting that temperature is not a key driver of winter excess mortality. Using regression models within monthly strata, we found that variability in daily mortality within cities was not strongly influenced by winter temperature. Finally we found that inadequate control for seasonality in analyses of the effects of cold temperatures led to spuriously large assumed cold effects, and erroneous attribution of winter mortality to cold temperatures. Our findings suggest that reductions in cold-related mortality under warming climate may be much smaller than some have assumed. This should be of interest to researchers and policy makers concerned with projecting future health effects of climate change and developing relevant adaptation strategies.

Warmed Winter Water Temperatures Alter Reproduction in Two Fish Species.

Science.gov (United States)

Firkus, Tyler; Rahel, Frank J; Bergman, Harold L; Cherrington, Brian D

2018-02-01

We examined the spawning success of Fathead Minnows (Pimephales promelas) and Johnny Darters (Etheostoma nigrum) exposed to elevated winter water temperatures typical of streams characterized by anthropogenic thermal inputs. When Fathead Minnows were exposed to temperature treatments of 12, 16, or 20 °C during the winter, spawning occurred at 16 and 20 °C but not 12 °C. Eggs were deposited over 9 weeks before winter spawning ceased. Fathead Minnows from the three winter temperature treatments were then exposed to a simulated spring transition. Spawning occurred at all three temperature treatments during the spring, but fish from the 16° and 20 °C treatment had delayed egg production indicating a latent effect of warm winter temperatures on spring spawning. mRNA analysis of the egg yolk protein vitellogenin showed elevated expression in female Fathead Minnows at 16 and 20 °C during winter spawning that decreased after winter spawning ceased, whereas Fathead Minnows at 12 °C maintained comparatively low expression during winter. Johnny Darters were exposed to 4 °C to represent winter temperatures in the absence of thermal inputs, and 12, 16, and 20 °C to represent varying degrees of winter thermal pollution. Johnny Darters spawned during winter at 12, 16, and 20 °C but not at 4 °C. Johnny Darters at 4 °C subsequently spawned following a simulated spring period while those at 12, 16, and 20 °C did not. Our results indicate elevated winter water temperatures common in effluent-dominated streams can promote out-of-season spawning and that vitellogenin expression is a useful indicator of spawning readiness for fish exposed to elevated winter temperatures.

Winter Wonderlands

Science.gov (United States)

Coy, Mary

2011-01-01

Listening to people complain about the hardships of winter and the dreariness of the nearly constant gray sky prompted the author to help her sixth graders recognize and appreciate the beauty that surrounds them for nearly five months of the year in western New York. The author opines that if students could see things more artistically, the winter…

Diatom community structure on in-service cruise ship hulls.

Science.gov (United States)

Hunsucker, Kelli Zargiel; Koka, Abhishek; Lund, Geir; Swain, Geoffrey

2014-10-01

Diatoms are an important component of marine biofilms found on ship hulls. However, there are only a few published studies that describe the presence and abundance of diatoms on ships, and none that relate to modern ship hull coatings. This study investigated the diatom community structure on two in-service cruise ships with the same cruise cycles, one coated with an antifouling (AF) system (copper self-polishing copolymer) and the other coated with a silicone fouling-release (FR) system. Biofilm samples were collected during dry docking from representative areas of the ship and these provided information on the horizontal and vertical zonation of the hull, and intact and damaged coating and niche areas. Diatoms from the genera Achnanthes, Amphora and Navicula were the most common, regardless of horizontal ship zonation and coating type. Other genera were abundant, but their presence was more dependent on the ship zonation and coating type. Samples collected from damaged areas of the hull coating had a similar community composition to undamaged areas, but with higher diatom abundance. Diatom fouling on the niche areas differed from that of the surrounding ship hull and paralleled previous studies that investigated differences in diatom community structure on static and dynamically exposed coatings; niche areas were similar to static immersion and the hull to dynamic immersion. Additionally, diatom richness was greater on the ship with the FR coating, including the identification of several new genera to the biofouling literature, viz. Lampriscus and Thalassiophysa. These results are the first to describe diatom community composition on in-service ship hulls coated with a FR system. This class of coatings appears to have a larger diatom community compared to copper-based AF systems, with new diatom genera that have the ability to stick to ship hulls and withstand hydrodynamic forces, thus creating the potential for new problematic species in the biofilm.

Evolution of bacterial life-history traits is sensitive to community structure.

Science.gov (United States)

Ketola, Tarmo; Mikonranta, Lauri; Mappes, Johanna

2016-06-01

Very few studies have experimentally assessed the evolutionary effects of species interactions within the same trophic level. Here we show that when Serratia marcescens evolve in multispecies communities, their growth rate exceeds the growth rate of the bacteria that evolved alone, whereas the biomass yield gets lower. In addition to the community effects per se, we found that few species in the communities caused strong effects on S. marcescens evolution. The results indicate that evolutionary responses (of a focal species) are different in communities, compared to species evolving alone. Moreover, selection can lead to very different outcomes depending on the community structure. Such context dependencies cast doubt on our ability to predict the course of evolution in the wild, where species often inhabit very different kinds of communities. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Potential impacts of climate change on the winter distribution of Afro-Palaearctic migrant passerines

DEFF Research Database (Denmark)

Barbet-Massin, Morgane; Walther, Bruno A; Thuiller, Wilfried

2009-01-01

We modelled the present and future sub-Saharan winter distributions of 64 trans-Saharan migrant passerines to predict the potential impacts of climate change. These predictions used the recent ensemble modelling developments and the latest IPCC climatic simulations to account for possible...... changes in range size and location were spatially structured, with species that winter in southern and eastern Africa facing larger range contractions and shifts. Predicted changes in regional species richness for these long-distance migrants are increases just south of the Sahara and on the Arabian...... Peninsula and major decreases in southern and eastern Africa....

Ectomycorrhizal fungal diversity and community structure associated with cork oak in different landscapes.

Science.gov (United States)

Reis, Francisca; Valdiviesso, Teresa; Varela, Carolina; Tavares, Rui M; Baptista, Paula; Lino-Neto, Teresa

2018-05-01

Cork oak (Quercus suber L.) forests play an important ecological and economic role. Ectomycorrhizal fungi (ECMF) are key components for the sustainability and functioning of these ecosystems. The community structure and composition of ECMF associated with Q. suber in different landscapes of distinct Mediterranean bioclimate regions have not previously been compared. In this work, soil samples from cork oak forests residing in different bioclimates (arid, semi-arid, sub-humid, and humid) were collected and surveyed for ectomycorrhizal (ECM) root tips. A global analysis performed on 3565 ECM root tips revealed that the ECMF community is highly enriched in Russula, Tomentella, and Cenoccocum, which correspond to the ECMF genera that mainly contribute to community differences. The ECMF communities from the rainiest and the driest cork oak forests were distinct, with soils from the rainiest climates being more heterogeneous than those from the driest climates. The analyses of several abiotic factors on the ECMF communities revealed that bioclimate, precipitation, soil texture, and forest management strongly influenced ECMF structure. Shifts in ECMF with different hyphal exploration types were also detected among forests, with precipitation, forest system, and soil texture being the main drivers controlling their composition. Understanding the effects of environmental factors on the structuring of ECM communities could be the first step for promoting the sustainability of this threatened ecosystem.

Migratory patterns and population structure among breeding and wintering red-breasted mergansers (Mergus serrator) and common mergansers (M. merganser)

Science.gov (United States)

Pearce, J.M.; McCracken, K.G.; Christensen, Thomas K.; Zhuravlev, Y.N.

2009-01-01

Philopatry has long been assumed to structure populations of waterfowl and other species of birds genetically, especially via maternally transmitted mitochondrial DNA (mtDNA), yet other migratory behaviors and nesting ecology (use of ground vs. cavity sites) may also contribute to population genetic structure. We investigated the effects of migration and nesting ecology on the population genetic structure of two Holarctic waterfowl, the Red-breasted Merganser (Mergus serrator) and Common Merganser (M. merganser), using mtDNA control-region sequence data. Red-breasted Mergansers (a ground-nesting species) exhibited lower levels of population differentiation across their North American range, possibly as a result of post-Pleistocene range expansion and population growth. By contrast, Common Mergansers (a cavity-nesting species) breeding in western and eastern North America were strongly differentiated, as were continental groups in North America and Europe. Our hypothesis that population differentiation of breeding female Common Mergansers results from limited migration during non-breeding periods was not supported, in that equally heterogeneous mtDNA lineages were observed in males and females on several wintering areas. The interspecific differences in mtDNA patterns for these two closely related species may have resulted from factors related to nesting ecology (ground vs. cavity nesting) and responses to historical climate change.

Community structure characteristics of phytoplankton in zhalong wetland, china

International Nuclear Information System (INIS)

Zhang, N.; Zang, S.S.

2015-01-01

In autumn 2010, the phytoplankton samples were collected in Zhalong Wetland. A total of 347 species belonging to 78 genera,6 phyla were identified, Chlorophyta and Bacillariophyta were dominated phytoplankton communities, including 143 species of Chlorophyta, 116 species of Bacillariophyta, 45 species of Cyanophyta, 39 species of Euglenophyta, 3 species of Pyrrophyta, 1 species of Chrysophyta. In the core area 66 genera, 222 species were identified, in the buffer area 63 genera, 210 species were identified, in the experiment area 63 genera, 167 species were identified. The dominant species in Zhalong Wetland included Cyclotella meneghiniana, Chlorella vulgaris, Trachelomonas volvocina, Nitzschia sp.. The average phytoplankton density was 12.13*10/sup 6/ in Zhalong Wetland, the phytoplankton density of Bacillariophyta was highest (32.82*10/sup 6/ ind L/sup -1/), and then Chlorophyta (23.73*10/sup 6/ ind L/sup -1/) and Cyanophyta (11.43*106 ind L-1), respectively. The results of cluster analysis showed that phytoplankton community structure could be divided into three types, and within-group similarities of phytoplankton community structure was not high, but inter-group non-similarity was high. Based on the species composition, phytoplankton density, phytoplankton pollution indicator, it suggested that Zhalong Wetland was mesotrophic state. (author)

Classification guide: Sochi 2014 Paralympic Winter Games

OpenAIRE

2014-01-01

The Sochi 2014 Paralympic Winter Games classification guide is designed to provide National Paralympic Committees (NPCs) and International Federations (IFs) with information about the classification policies and procedures that will apply to the Sochi 2014 Paralympic Winter Games.

Environmental and Spatial Influences on Biogeography and Community Structure of Benthic Diatoms

Science.gov (United States)

Plante, C.; Hill-Spanik, K.; Lowry, J.

2016-02-01

Several theoretical and practical reasons suggest that benthic microalgae could be useful bioindicators. For instance, an ideal indicator species or community would be associated with a given habitat due to local physical conditions or biotic interactions (i.e., `environmental filtering'), not due to dispersal limitation. Due to their small size, immense abundances, and reliance on passive dispersal, the popular notion about micro-organisms is that `Everything is everywhere, but, the environment selects' (Baas-Becking 1934). Although much recent research concerning planktonic bacteria and dispersal limitation has been conducted, very little in this regard is known about microeukaryotes, especially benthic microbes. The purpose of our study was to identify and compare spatial and environmental influences on benthic diatom community structure and biogeography. In summer 2015, sediment was sampled at various spatial scales from four barrier island beaches in South Carolina, USA, and high-throughput (Ion Torrent) DNA sequencing was used to characterize diatom assemblages. ANOSIM and principal coordinates analysis revealed that communities were statistically distinct on the four islands. Community dissimilarity was compared to both spatial distance and environmental differences to determine potential influences of these variables on community structure. We found that geographic distance had the strongest correlation with community similarity, with and without one anomalous location, while differences in temperature (air, water, and sediment), nutrients, organic matter, and turbidity also had significant but weaker relationships with community structure. Surprisingly, air temperature, which changes on very short time scales, appeared to be the environmental factor most strongly related to diatom species composition, potentially implicating some unmeasured variable (e.g., cloud cover). However, we also found that temperature and geographic distance were strongly

Ecology of Culiseta Melanura and Other Mosquitoes (Diptera: Culicidae) from Walton County, FL, During Winter Period 2013-2014.

Science.gov (United States)

Burkett-Cadena, Nathan D; Bingham, Andrea M; Hunt, Brenda; Morse, Gary; Unnasch, Thomas R

2015-09-01

Winter ecology of putative vectors of eastern equine encephalomyelitis virus (EEEV) in northern Florida was investigated at field locations with evidence of historic EEEV winter transmission. Light traps and resting shelters were used to sample the mosquito community in the vicinity of eight sentinel flocks throughout the winter period (November-April) of 2013 and 2014 in Walton County, FL. Overall mosquito activity was relatively low, although mosquitoes were captured during each week of the study period. Mosquito activity was linked to morning temperature, and females were captured when ambient morning temperatures were quite low (1-5°C). Anopheles crucians Wiedemann, Culex erraticus (Dyar and Knab), Culex territans Walker, and Culiseta melanura (Coquillett) were the most commonly collected mosquito species (of 20 total species). Analysis of blood-engorged mosquitoes revealed a number of mosquito species feeding upon chickens, other birds, amphibians, and domestic and wild mammals. Cs. melanura fed primarily upon chickens and songbirds (Passeriformes), suggesting that this mosquito species is the likely winter vector of EEEV to sentinel chickens in northern Florida. Both resident and nonresident songbird species were fed upon, constituting 63.9 and 36.1% of total songbird meals, respectively. Our results suggest important roles for Cs. melanura and songbird hosts for the winter transmission of EEEV in northern Florida. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Body size, energy use, and community structure of small mammals

OpenAIRE

Ernest, S.K. Morgan

2005-01-01

Body size has long been hypothesized to play a major role in community structure and dynamics. Two general hypotheses exist for how resources are distributed among body sizes: (1) resources are equally available and uniformly utilized across body sizes and (2) resources are differentially available to organisms of different body sizes, resulting in a nonuniform or modal distribution. It has also been predicted that the distri-bution of body sizes of species in a community should reflect the u...

A modeling study of the thermosphere-ionosphere interactions during the boreal winter and spring 2015-2016: Tidal and planetary-scale waves effect on the ionospheric structure.

Science.gov (United States)

Sassi, F.; McDonald, S. E.; McCormack, J. P.; Tate, J.; Liu, H.; Kuhl, D.

2017-12-01

The 2015-2016 boreal winter and spring is a dynamically very interesting time in the lower atmosphere: a minor high latitude stratospheric warming occurred in February 2016; an interrupted descent of the QBO was found in the tropical stratosphere; and a large warm ENSO took place in the tropical Pacific Ocean. The stratospheric warming, the QBO and ENSO are known to affect in different ways the meteorology of the upper atmosphere in different ways: low latitude solar tides and high latitude planetary-scale waves have potentially important implications on the structure of the ionosphere. In this study, we use global atmospheric analyses from a high-altitude version of the High-Altitude Navy Global Environmental Model (HA-NAVGEM) to constrain the meteorology of numerical simulations of the Specified Dynamics Whole Atmosphere Community Climate Model, extended version (SD-WACCM-X). We describe the large-scale behavior of tropical tides and mid-latitude planetary waves that emerge in the lower thermosphere. The effect on the ionosphere is captured by numerical simulations of the Navy Highly Integrated Thermosphere Ionosphere Demonstration System (Navy-HITIDES) that uses the meteorology generated by SD-WACCM-X to drive ionospheric simulations during this time period. We will analyze the impact of various dynamical fields on the zonal behavior of the ionosphere by selectively filtering the relevant dynamical modes.

Winter chilling speeds spring development of temperate butterflies.

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Stålhandske, Sandra; Gotthard, Karl; Leimar, Olof

2017-07-01

Understanding and predicting phenology has become more important with ongoing climate change and has brought about great research efforts in the recent decades. The majority of studies examining spring phenology of insects have focussed on the effects of spring temperatures alone. Here we use citizen-collected observation data to show that winter cold duration, in addition to spring temperature, can affect the spring emergence of butterflies. Using spatial mixed models, we disentangle the effects of climate variables and reveal impacts of both spring and winter conditions for five butterfly species that overwinter as pupae across the UK, with data from 1976 to 2013 and one butterfly species in Sweden, with data from 2001 to 2013. Warmer springs lead to earlier emergence in all species and milder winters lead to statistically significant delays in three of the five investigated species. We also find that the delaying effect of winter warmth has become more pronounced in the last decade, during which time winter durations have become shorter. For one of the studied species, Anthocharis cardamines (orange tip butterfly), we also make use of parameters determined from previous experiments on pupal development to model the spring phenology. Using daily temperatures in the UK and Sweden, we show that recent variation in spring temperature corresponds to 10-15 day changes in emergence time over UK and Sweden, whereas variation in winter duration corresponds to 20 days variation in the south of the UK versus only 3 days in the south of Sweden. In summary, we show that short winters delay phenology. The effect is most prominent in areas with particularly mild winters, emphasising the importance of winter for the response of ectothermic animals to climate change. With climate change, these effects may become even stronger and apply also at higher latitudes. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

Physical structure and algae community of summer upwelling off eastern Hainan

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Xu, H.; Liu, S.; Xie, Q.; Hong, B.; Long, T.

2017-12-01

The upwelling system is the most productive ecosystem along the continental shelf of the northern South China Sea Shelf. It brings nutrient from bottom to surface and blooms biotic community driven by summer monsoon. In this study, we present observed results of physical and biotic community structures during August, 2015 in the upwelling system along Hainan eastern coast, which is one the strongest upwelling systems in the northern South China Sea. By using hydrological data collected by CTD, we found a significant cold water tongue with high salinity which extended from offshore to 100 m isobaths. However, dissolved oxygen (DO) showed a sandwich structure in which high core of DO concentration appeared at the layer from 5 m to 30 m. It possibly was caused by the advection transport of high DO from adjacent area. Basically, this upwelling system was constrained at northern area of 18.8ºN in horizontal due to the weakening summer monsoon in August. In addition, we collected water sample at the upwelling area and measured algae categories and concentration by high performance liquid chromatography (HPLC). Results show the biotic community was dominated by five types of algae mainly, they were diatoms, dinoflagellates, green algae, prokaryotes and prochlorococcus. And different patterns of different algae were demonstrated. In the upwelling area, diatoms and prokaryotes show opposite structures, and more complex pattern for the rest three algae indicating an active biotic community in the upwelling system.

Compositional divergence and convergence in local communities and spatially structured landscapes.

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Tancredi Caruso

Full Text Available Community structure depends on both deterministic and stochastic processes. However, patterns of community dissimilarity (e.g. difference in species composition are difficult to interpret in terms of the relative roles of these processes. Local communities can be more dissimilar (divergence than, less dissimilar (convergence than, or as dissimilar as a hypothetical control based on either null or neutral models. However, several mechanisms may result in the same pattern, or act concurrently to generate a pattern, and much research has recently been focusing on unravelling these mechanisms and their relative contributions. Using a simulation approach, we addressed the effect of a complex but realistic spatial structure in the distribution of the niche axis and we analysed patterns of species co-occurrence and beta diversity as measured by dissimilarity indices (e.g. Jaccard index using either expectations under a null model or neutral dynamics (i.e., based on switching off the niche effect. The strength of niche processes, dispersal, and environmental noise strongly interacted so that niche-driven dynamics may result in local communities that either diverge or converge depending on the combination of these factors. Thus, a fundamental result is that, in real systems, interacting processes of community assembly can be disentangled only by measuring traits such as niche breadth and dispersal. The ability to detect the signal of the niche was also dependent on the spatial resolution of the sampling strategy, which must account for the multiple scale spatial patterns in the niche axis. Notably, some of the patterns we observed correspond to patterns of community dissimilarities previously observed in the field and suggest mechanistic explanations for them or the data required to solve them. Our framework offers a synthesis of the patterns of community dissimilarity produced by the interaction of deterministic and stochastic determinants of community

LiDAR Remote Sensing of Forest Structure and GPS Telemetry Data Provide Insights on Winter Habitat Selection of European Roe Deer

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Michael Ewald

2014-06-01

Full Text Available The combination of GPS-Telemetry and resource selection functions is widely used to analyze animal habitat selection. Rapid large-scale assessment of vegetation structure allows bridging the requirements of habitat selection studies on grain size and extent, particularly in forest habitats. For roe deer, the cold period in winter forces individuals to optimize their trade off in searching for food and shelter. We analyzed the winter habitat selection of roe deer (Capreolus capreolus in a montane forest landscape combining estimates of vegetation cover in three different height strata, derived from high resolution airborne Laser-scanning (LiDAR, Light detection and ranging, and activity data from GPS telemetry. Specifically, we tested the influence of temperature, snow height, and wind speed on site selection, differentiating between active and resting animals using mixed-effects conditional logistic regression models in a case-control design. Site selection was best explained by temperature deviations from hourly means, snow height, and activity status of the animals. Roe deer tended to use forests of high canopy cover more frequently with decreasing temperature, and when snow height exceeded 0.6 m. Active animals preferred lower canopy cover, but higher understory cover. Our approach demonstrates the potential of LiDAR measures for studying fine scale habitat selection in complex three-dimensional habitats, such as forests.

Analysis of bacterial and fungal community structure in replant ...

African Journals Online (AJOL)

High quality DNA is the basis of analyzing bacterial and fungal community structure in replant strawberry rhizosphere soil with the method of denaturing gradient gel electrophoresis (DGGE). DNA of soil microorganisms was extracted from the rhizosphere soil of strawberries planted in different replanted years (0, two, ...

Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska.

Science.gov (United States)

Kim, Hye Min; Jung, Ji Young; Yergeau, Etienne; Hwang, Chung Yeon; Hinzman, Larry; Nam, Sungjin; Hong, Soon Gyu; Kim, Ok-Sun; Chun, Jongsik; Lee, Yoo Kyung

2014-08-01

The subarctic region is highly responsive and vulnerable to climate change. Understanding the structure of subarctic soil microbial communities is essential for predicting the response of the subarctic soil environment to climate change. To determine the composition of the bacterial community and its relationship with soil properties, we investigated the bacterial community structure and properties of surface soil from the moist acidic tussock tundra in Council, Alaska. We collected 70 soil samples with 25-m intervals between sampling points from 0-10 cm to 10-20 cm depths. The bacterial community was analyzed by pyrosequencing of 16S rRNA genes, and the following soil properties were analyzed: soil moisture content (MC), pH, total carbon (TC), total nitrogen (TN), and inorganic nitrogen (NH4+ and NO3-). The community compositions of the two different depths showed that Alphaproteobacteria decreased with soil depth. Among the soil properties measured, soil pH was the most significant factor correlating with bacterial community in both upper and lower-layer soils. Bacterial community similarity based on jackknifed unweighted unifrac distance showed greater similarity across horizontal layers than through the vertical depth. This study showed that soil depth and pH were the most important soil properties determining bacterial community structure of the subarctic tundra soil in Council, Alaska. © 2014 The Authors. FEMS Microbiology Ecology published by John Wiley & Sons Ltd on behalf of the Federation of European Microbiological Societies.

Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond

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Zarraz M.-P. Lee

2017-05-01

Full Text Available Nutrient availability and ratios can play an important role in shaping microbial communities of freshwater ecosystems. The Cuatro Ciénegas Basin (CCB in Mexico is a desert oasis where, perhaps paradoxically, high microbial diversity coincides with extreme oligotrophy. To better understand the effects of nutrients on microbial communities in CCB, a mesocosm experiment was implemented in a stoichiometrically imbalanced pond, Lagunita, which has an average TN:TP ratio of 122 (atomic. The experiment had four treatments, each with five spatial replicates – unamended controls and three fertilization treatments with different nitrogen:phosphorus (N:P regimes (P only, N:P = 16 and N:P = 75 by atoms. In the water column, quantitative PCR of the 16S rRNA gene indicated that P enrichment alone favored proliferation of bacterial taxa with high rRNA gene copy number, consistent with a previously hypothesized but untested connection between rRNA gene copy number and P requirement. Bacterial and microbial eukaryotic community structure was investigated by pyrosequencing of 16S and 18S rRNA genes from the planktonic and surficial sediment samples. Nutrient enrichment shifted the composition of the planktonic community in a treatment-specific manner and promoted the growth of previously rare bacterial taxa at the expense of the more abundant, potentially endemic, taxa. The eukaryotic community was highly enriched with phototrophic populations in the fertilized treatment. The sediment microbial community exhibited high beta diversity among replicates within treatments, which obscured any changes due to fertilization. Overall, these results showed that nutrient stoichiometry can be an important factor in shaping microbial community structure.

Women's Heart Disease: Join the Heart Truth Community

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... this page please turn JavaScript on. Feature: Women's Heart Disease Join The Heart Truth Community Past Issues / Winter 2014 Table of Contents National Symbol The centerpiece of The Heart Truth ® is The Red Dress ® which was introduced ...

AUTOMATIC CONTROL SYSTEM OF WINTER AUTOMOBILE-ROAD MAINTENANCE

Directory of Open Access Journals (Sweden)

I. I. Leonovich

2008-01-01

Full Text Available In order to ensure a rational usage of financial and material resources directed on winter automobile-road maintenance in theRepublicofBelarusan automatic control system of winter maintenance is under its development and introduction.  The main purpose of the system is to obtain and use meteorological information on the state of a road network that allows to take necessary organizational and technological solutions ensuring safety and continuity of traffic during winter. This system also presupposes to ensure constant control over the state of roadway covering, expenditure of anti-glazed frost materials at all levels of management.The paper considers main aspects pertaining to introduction of the automatic control system of winter maintenance

Are there co-occurrence patterns that structure snake communities in Central Brazil?

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França, F G R; Araújo, A F B

2007-02-01

The main factors that structure Neotropical animal communities have been the subject of discussion in ecology communities. We used a set of null models to investigate the existence of structure in snake communities from the Cerrado in Central Brazil in relation to the co-occurrence of species and guilds concerning specific resources. We used fragments (conservation units) inside the Distrito Federal and neighbor municipalities. In spite of recent human colonization in the region from the end of the 1950s, intense habitat modification and fragmentation has taken place. Sixty three snake species are present in the Distrito Federal. Co-occurrence analysis of species and guilds associated to snake diets and habitats suggested a lack of organization. The homogeneity of habitats in Central Brazil and the minor importance of ecological effects can lead to random arrangement.

Postharvest tillage reduces Downy Brome infestations in winter wheat

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In the Pacific Northwest, downy brome continues to infest winter wheat producing regions especially in low-rainfall areas where the winter wheat-summer fallow rotation is the dominate production system. In Washington, a study was conducted for 2 years at each of two locations in the winter wheat -su...

Assessment of nematode community structure as a bioindicator in river monitoring

International Nuclear Information System (INIS)

Wu, H.C.; Chen, P.C.; Tsay, T.T.

2010-01-01

Nematode communities from river water and sediments were assessed for the abundance, feeding types, maturity indices and nematode channel ratio (NCR). The sampling sites studied included different levels of pollution and contamination from agricultural, industrial and sewage sources. The nematode abundance found in the sediment samples was more than that in the water samples. The lowest nematode abundance in sediment samples and the lowest NCR in water samples were both found at the industrial pollution site. Water samples showed positive correlation between the NCR and river pollution index (RPI). Mean maturity indices in sediment samples were inversely correlated with RPI. The pollutant source determined the relationship between NCR and pollution level, while maturity index always showed negative correlation with pollutant level regardless of the pollutant sources. The nematode abundance and its community structure were both reliable bioindicators for monitoring long-term river pollution in both qualitative and quantitative aspects. - Nematode community structure in rivers is related to the contamination source and level.

Assessment of nematode community structure as a bioindicator in river monitoring

Energy Technology Data Exchange (ETDEWEB)

Wu, H.C.; Chen, P.C. [Department of Plant Pathology, National Chung Hsing University, 250 Kuo Kuan Rd, Taichung 402, Taiwan (China); Tsay, T.T., E-mail: tttsay@nchu.edu.t [Department of Plant Pathology, National Chung Hsing University, 250 Kuo Kuan Rd, Taichung 402, Taiwan (China)

2010-05-15

Nematode communities from river water and sediments were assessed for the abundance, feeding types, maturity indices and nematode channel ratio (NCR). The sampling sites studied included different levels of pollution and contamination from agricultural, industrial and sewage sources. The nematode abundance found in the sediment samples was more than that in the water samples. The lowest nematode abundance in sediment samples and the lowest NCR in water samples were both found at the industrial pollution site. Water samples showed positive correlation between the NCR and river pollution index (RPI). Mean maturity indices in sediment samples were inversely correlated with RPI. The pollutant source determined the relationship between NCR and pollution level, while maturity index always showed negative correlation with pollutant level regardless of the pollutant sources. The nematode abundance and its community structure were both reliable bioindicators for monitoring long-term river pollution in both qualitative and quantitative aspects. - Nematode community structure in rivers is related to the contamination source and level.

How to Have a Healthy Winter | Poster

Science.gov (United States)

Without a doubt, winter is here. Between the icy weather and the recent hustle and bustle of the holidays, everyone is at an increased risk of getting sick. With that in mind, Occupational Health Services has a few simple tips for staying healthy this winter.

Bacterial community structure in aquifers corresponds to stratigraphy

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Beyer, Andrea; Möller, Silke; Neumann, Stefan; Burow, Katja; Gutmann, Falko; Lindner, Julia; Müsse, Steffen; Kothe, Erika; Büchel, Georg

2014-05-01

So far, groundwater microbiology with respect to different host rocks has not been well described in the literature. However, factors influencing the communities would be of interest to provide a tool for mapping groundwater paths. The Thuringian Basin (Germany) studied here, contains formations of the Permian (Zechstein) and also Triassic period of Buntsandstein, Muschelkalk and Keuper, all of which can be found to crop out at the surface in different regions. We analyzed the bacterial community of nine natural springs and sixteen groundwater wells of the respective rock formations as well as core material from the Zechstein salts. For that we sampled in a mine 3 differnet salt rock samples (carnallitite, halite and sylvinitite). To validate the different approaches, similar rock formations were compared and a consistent microbial community for Buntsandstein could be verified. Similary, for Zechstein, the presence of halophiles was seen with cultivation, isolation directly from the rock material and also in groundwater with DNA-dependent approaches. A higher overlap between sandstone- and limestone-derived communities was visible as if compared to the salt formations. Principal component analysis confirmed formation specific patterns for Muschelkalk, Buntsandstein and Zechstein for the bacterial taxa present, with some overlaps. Bacilli and Gammaproteobacteria were the major groups, with the genera Pseudomonas, Marinomonas, Bacillus, Marinobacter and Pseudoalteromonas representing the communities. The bacteria are well adapted to their respective environment with survival strategies including a wide range of salinity which makes them suitable as tracers for fluid movement below the ground. The results indicate the usefulness and robustness of the approach taken here to investigate aquifer community structures in dependence of the stratigraphy of the groundwater reservoir.

Drought and Winter Drying (Pest Alert)

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USDA Forest Service

Drought and winter drying have periodically caused major damage to trees. Drought reduces the amount of water available in the soil. In the case of winter drying, the water may be in the soil, but freezing of the soil makes the water unavailable to the tree. In both cases, more water is lost through transpiration than is available to the plant. Symptoms of drought and...

Access to Electric Light Is Associated with Shorter Sleep Duration in a Traditionally Hunter-Gatherer Community.

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de la Iglesia, Horacio O; Fernández-Duque, Eduardo; Golombek, Diego A; Lanza, Norberto; Duffy, Jeanne F; Czeisler, Charles A; Valeggia, Claudia R

2015-08-01

Access to electric light might have shifted the ancestral timing and duration of human sleep. To test this hypothesis, we studied two communities of the historically hunter-gatherer indigenous Toba/Qom in the Argentinean Chaco. These communities share the same ethnic and sociocultural background, but one has free access to electricity while the other relies exclusively on natural light. We fitted participants in each community with wrist activity data loggers to assess their sleep-wake cycles during one week in the summer and one week in the winter. During the summer, participants with access to electricity had a tendency to a shorter daily sleep bout (43 ± 21 min) than those living under natural light conditions. This difference was due to a later daily bedtime and sleep onset in the community with electricity, but a similar sleep offset and rise time in both communities. In the winter, participants without access to electricity slept longer (56 ± 17 min) than those with access to electricity, and this was also related to earlier bedtimes and sleep onsets than participants in the community with electricity. In both communities, daily sleep duration was longer during the winter than during the summer. Our field study supports the notion that access to inexpensive sources of artificial light and the ability to create artificially lit environments must have been key factors in reducing sleep in industrialized human societies. © 2015 The Author(s).

The fungal community structure of barley malts from diverse geographical regions correlates with malt quality parameters.

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Kaur, Mandeep; Bowman, John P; Stewart, Doug C; Evans, David E

2015-12-23

Malt is a preferred base for fermentations that produce beer or whisky. Barley for malt is grown under diverse environments in different geographical locations. Malt provides an ecological niche for a varied range of microorganisms with both positive and negative effects on its quality for brewing. Little information exists in the literature on the microbial community structure of Australian malt as well as broader global geographical differences in the associated fungal and bacterial communities. The aims of the present study were to compare the bacterial and fungal community structures of Australian commercial malt with its international counterparts originating from different geographical regions using terminal restriction fragment length polymorphism (TRFLP) fingerprinting and clone library analyses of ribosomal RNA genes. Further, the relationship between malt associated microbial communities and conventional malt quality parameters was also compared. Results showed that differences in fungal communities of malts from different geographical location were more pronounced than bacterial communities. TRFLP analysis discriminated high quality commercial malts with low fungal loads from malts deliberately infected with fungal inocula (Fusarium/Penicillium). Malt moisture, beta-amylase, α-amylase and limit dextrinase contents showed significant correlations with fungal community structure. This investigation concluded that fungal community structure was more important to subsequent malt quality outcomes than bacteria. Copyright © 2015 Elsevier B.V. All rights reserved.

Geochip: A high throughput genomic tool for linking community structure to functions

Energy Technology Data Exchange (ETDEWEB)

Van Nostrand, Joy D.; Liang, Yuting; He, Zhili; Li, Guanghe; Zhou, Jizhong

2009-01-30

GeoChip is a comprehensive functional gene array that targets key functional genes involved in the geochemical cycling of N, C, and P, sulfate reduction, metal resistance and reduction, and contaminant degradation. Studies have shown the GeoChip to be a sensitive, specific, and high-throughput tool for microbial community analysis that has the power to link geochemical processes with microbial community structure. However, several challenges remain regarding the development and applications of microarrays for microbial community analysis.

Genetics-based interactions among plants, pathogens, and herbivores define arthropod community structure.

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Busby, Posy E; Lamit, Louis J; Keith, Arthur R; Newcombe, George; Gehring, Catherine A; Whitham, Thomas G; Dirzo, Rodolfo

2015-07-01

Plant resistance to pathogens or insect herbivores is common, but its potential for indirectly influencing plant-associated communities is poorly known. Here, we test whether pathogens' indirect effects on arthropod communities and herbivory depend on plant resistance to pathogens and/or herbivores, and address the overarching interacting foundation species hypothesis that genetics-based interactions among a few highly interactive species can structure a much larger community. In a manipulative field experiment using replicated genotypes of two Populus species and their interspecific hybrids, we found that genetic variation in plant resistance to both pathogens and insect herbivores modulated the strength of pathogens' indirect effects on arthropod communities and insect herbivory. First, due in part to the pathogens' differential impacts on leaf biomass among the two Populus species and the hybrids, the pathogen most strongly impacted arthropod community composition, richness, and abundance on the pathogen-susceptible tree species. Second, we found similar patterns comparing pathogen-susceptible and pathogen-resistant genotypes within species. Third, within a plant species, pathogens caused a fivefold greater reduction in herbivory on insect-herbivore-susceptible plant genotypes than on herbivore-resistant genotypes, demonstrating that the pathogen-herbivore interaction is genotype dependent. We conclude that interactions among plants, pathogens, and herbivores can structure multitrophic communities, supporting the interacting foundation species hypothesis. Because these interactions are genetically based, evolutionary changes in genetic resistance could result in ecological changes in associated communities, which may in turn feed back to affect plant fitness.

Habitat and landscape characteristics underlying anuran community structure along an urban-rural gradient.

Science.gov (United States)

Pillsbury, Finn C; Miller, James R

2008-07-01

Urbanization has been cited as an important factor in worldwide amphibian declines, and although recent work has illustrated the important influence of broad-scale ecological patterns and processes on amphibian populations, little is known about the factors structuring amphibian communities in urban landscapes. We therefore examined amphibian community responses to wetland habitat availability and landscape characteristics along an urban-rural gradient in central Iowa, USA, a region experiencing rapid suburban growth. We conducted call surveys at 61 wetlands to estimate anuran calling activity, and quantified wetland habitat structure and landscape context. We used canonical correspondence analysis (CCA) to examine patterns in anuran community structure and identify the most important variables associated with those patterns. Urban density at the landscape scale had a significant negative influence on overall anuran abundance and diversity. While every species exhibited a decrease in abundance with increasing urban density, this pattern was especially pronounced for species requiring post-breeding upland habitats. Anurans most affected by urbanization were those associated with short hydroperiods, early breeding activity, and substantial upland habitat use. We suggest that broad-scale landscape fragmentation is an important factor underlying anuran community structure in this region, possibly due to limitations on the accessibility of otherwise suitable habitat in fragmented urban landscapes. This study underscores the importance of a regional approach to amphibian conservation in urban and urbanizing areas; in fragmented landscapes, a network of interconnected wetland and upland habitats may be more likely to support a successful, diverse anuran community than will isolated sites.

Host species and developmental stage, but not host social structure, affects bacterial community structure in socially polymorphic bees.

Science.gov (United States)

McFrederick, Quinn S; Wcislo, William T; Hout, Michael C; Mueller, Ulrich G

2014-05-01

Social transmission and host developmental stage are thought to profoundly affect the structure of bacterial communities associated with honey bees and bumble bees, but these ideas have not been explored in other bee species. The halictid bees Megalopta centralis and M. genalis exhibit intrapopulation social polymorphism, which we exploit to test whether bacterial communities differ by host social structure, developmental stage, or host species. We collected social and solitary Megalopta nests and sampled bees and nest contents from all stages of host development. To survey these bacterial communities, we used 16S rRNA gene 454 pyrosequencing. We found no effect of social structure, but found differences by host species and developmental stage. Wolbachia prevalence differed between the two host species. Bacterial communities associated with different developmental stages appeared to be driven by environmentally acquired bacteria. A Lactobacillus kunkeei clade bacterium that is consistently associated with other bee species was dominant in pollen provisions and larval samples, but less abundant in mature larvae and pupae. Foraging adults appeared to often reacquire L. kunkeei clade bacteria, likely while foraging at flowers. Environmental transmission appears to be more important than social transmission for Megalopta bees at the cusp between social and solitary behavior. © 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

Mapping Winter Wheat with Multi-Temporal SAR and Optical Images in an Urban Agricultural Region.

Science.gov (United States)

Zhou, Tao; Pan, Jianjun; Zhang, Peiyu; Wei, Shanbao; Han, Tao

2017-05-25

Winter wheat is the second largest food crop in China. It is important to obtain reliable winter wheat acreage to guarantee the food security for the most populous country in the world. This paper focuses on assessing the feasibility of in-season winter wheat mapping and investigating potential classification improvement by using SAR (Synthetic Aperture Radar) images, optical images, and the integration of both types of data in urban agricultural regions with complex planting structures in Southern China. Both SAR (Sentinel-1A) and optical (Landsat-8) data were acquired, and classification using different combinations of Sentinel-1A-derived information and optical images was performed using a support vector machine (SVM) and a random forest (RF) method. The interference coherence and texture images were obtained and used to assess the effect of adding them to the backscatter intensity images on the classification accuracy. The results showed that the use of four Sentinel-1A images acquired before the jointing period of winter wheat can provide satisfactory winter wheat classification accuracy, with an F1 measure of 87.89%. The combination of SAR and optical images for winter wheat mapping achieved the best F1 measure-up to 98.06%. The SVM was superior to RF in terms of the overall accuracy and the kappa coefficient, and was faster than RF, while the RF classifier was slightly better than SVM in terms of the F1 measure. In addition, the classification accuracy can be effectively improved by adding the texture and coherence images to the backscatter intensity data.

The effect of salinity levels on the structure of zooplankton communities

Directory of Open Access Journals (Sweden)

Paturej Ewa

2015-01-01

Full Text Available The objective of this study was to determine the qualitative and quantitative structure of zooplankton communities in the Vistula Lagoon and to establish whether zooplankton abundance and biodiversity are affected by salinity levels. Samples for biological analyses were collected in the summer (June-September of 2007-2011 at eleven sampling sites. Statistical analysis revealed a significant correlation between salinity levels and the number of species (r= -0.2020, abundance (r= 0.1967 and biomass (r= 0.3139 of zooplankton. No significant correlations were found between salinity and the biodiversity of zooplankton. The results of the study suggest that salinity affects the abundance and structure, but not the diversity of zooplankton communities in the Vistula Lagoon.

[Species, functional, structural diversity of typical plant communities and their responses to environmental factors in Miao Archipelago, China.

Science.gov (United States)

Zheng, Li Ting; Su, Tian; Liu, Xiang Yu; Yin, Fang; Guo, Chao; Tuo, Bin; Yan, En Rong

2018-02-01

Island vegetation plays an important role in biodiversity research across the world. The study of plant diversity in island is helpful for understanding the mechanism of plant diversity maintenance under land-sea interaction. Here, four typical plant communities (Quercus acutissima community, Robinia pseudoacacia community, Pinus thunbergii community and Vitex negundo community) in Miao Archipelago were selected to examine the species, functional and structural diversities and their responses to environmental factors at the community scale by using species diversity indices, functional diversity indices, as well as structural diversity indices. The results showed that the species richness and Rao index of P. thunbergii community was higher than that of Q. acutissima community and R. pseudoacacia community, but the structural diversity was lower. The species diversity and structural diversity of V. Negundo shrub were lower than that of forest community, but the functional diversity was higher than some forest communities. The relationship between the diversity of typical plant communities in island area illustrated a significant positive correlation between species richness with Rao index and tree height diversity, however the correlation with functional evenness was significantly negative. The structural diversity and functional evenness were determined by slope with negative and positive relationships, respectively. Functional heterogeneity, functional divergence and species diversity were affected largely by soil physical and chemical properties, displaying the positive relationship with soil bulk density and soil total carbon content, and a negative relationship with soil water content. In conclusion, diversity pattern of plant community in Miao Archipelago reflected not only the characteristics in mainland vegetation but also the special nature of the sea island.

Seasonal overturning circulation in the Red Sea: 2. Winter circulation

Science.gov (United States)

Yao, Fengchao; Hoteit, Ibrahim; Pratt, Larry J.; Bower, Amy S.; Köhl, Armin; Gopalakrishnan, Ganesh; Rivas, David

2014-04-01

The shallow winter overturning circulation in the Red Sea is studied using a 50 year high-resolution MITgcm (MIT general circulation model) simulation with realistic atmospheric forcing. The overturning circulation for a typical year, represented by 1980, and the climatological mean are analyzed using model output to delineate the three-dimensional structure and to investigate the underlying dynamical mechanisms. The horizontal model circulation in the winter of 1980 is dominated by energetic eddies. The climatological model mean results suggest that the surface inflow intensifies in a western boundary current in the southern Red Sea that switches to an eastern boundary current north of 24°N. The overturning is accomplished through a cyclonic recirculation and a cross-basin overturning circulation in the northern Red Sea, with major sinking occurring along a narrow band of width about 20 km along the eastern boundary and weaker upwelling along the western boundary. The northward pressure gradient force, strong vertical mixing, and horizontal mixing near the boundary are the essential dynamical components in the model's winter overturning circulation. The simulated water exchange is not hydraulically controlled in the Strait of Bab el Mandeb; instead, the exchange is limited by bottom and lateral boundary friction and, to a lesser extent, by interfacial friction due to the vertical viscosity at the interface between the inflow and the outflow.

Mechanisms shaping size structure and functional diversity of phytoplankton communities in the ocean

Science.gov (United States)

Acevedo-Trejos, Esteban; Brandt, Gunnar; Bruggeman, Jorn; Merico, Agostino

2015-01-01

The factors regulating phytoplankton community composition play a crucial role in structuring aquatic food webs. However, consensus is still lacking about the mechanisms underlying the observed biogeographical differences in cell size composition of phytoplankton communities. Here we use a trait-based model to disentangle these mechanisms in two contrasting regions of the Atlantic Ocean. In our model, the phytoplankton community can self-assemble based on a trade-off emerging from relationships between cell size and (1) nutrient uptake, (2) zooplankton grazing, and (3) phytoplankton sinking. Grazing ‘pushes’ the community towards larger cell sizes, whereas nutrient uptake and sinking ‘pull’ the community towards smaller cell sizes. We find that the stable environmental conditions of the tropics strongly balance these forces leading to persistently small cell sizes and reduced size diversity. In contrast, the seasonality of the temperate region causes the community to regularly reorganize via shifts in species composition and to exhibit, on average, bigger cell sizes and higher size diversity than in the tropics. Our results raise the importance of environmental variability as a key structuring mechanism of plankton communities in the ocean and call for a reassessment of the current understanding of phytoplankton diversity patterns across latitudinal gradients. PMID:25747280

Physical structure of artificial seagrass affects macrozoobenthic community recruitment

Science.gov (United States)

Ambo-Rappe, R.; Rani, C.

2018-03-01

Seagrass ecosystems are important in supporting marine biodiversity. However, the worldwide decline in seagrass areas due to anthropogenic factors leads to a decrease in the marine biodiversity they can support. There is growing awareness of the need for concepts to conserve and/or rehabilitate seagrass ecosystems. One option is to create artificial seagrass to provide a physical structure for the marine organisms to colonize. The objective of this research was to analyze the effect of some artificial seagrasses and seagrass transplants on marine biodiversity, with a focus on the macrozoobenthic community. The experimental design compared two types of artificial seagrass (polypropylene ribbons and shrub-shaped plastic leaves), and seagrass transplants from nearby seagrass meadows. The experimental plots were 4 x 4 m2 with 3 replicates. Macrozoobenthic communities were sampled fortnightly for 3.5 months. At the end of the experiment, makrozoobenthos were also sampled from a natural seagrass bed nearby. Of 116 macrozoobenthic species in the artificial seagrass plots, 91 were gastropods. The density of the macrobenthic fauna increased from the beginning to the end of the study in all treatments, but the increase was only significant for the artificial seagrass treatment (i.e. shrub-like plastic leaves). There was a distinct separation between the macrozoobenthic community structure found in the restoration plots (artificial seagrass and transplanted seagrass) compared to natural seagrass beds.

Global characteristics of extreme winters from a multi-millennial simulation

Energy Technology Data Exchange (ETDEWEB)

Hunt, B.G. [CSIRO Marine and Atmospheric Research, PO Box 1, Aspendale (Australia)

2011-10-15

Output from a multi-millennial simulation with the CSIRO Mark 2 coupled global climatic model has been analysed to determine the principal characteristics of extreme winters over the globe for ''present conditions''. Thus, this study is not concerned with possible changes in winter conditions associated with anthropogenically induced climatic change. Defining an extreme winter as having a surface temperature anomaly of below -2 standard deviations (sd) revealed a general occurrence rate over the globe of between 100 and 200 over a 6,000-year period of the simulation, with somewhat higher values over northwest North America. For temperature anomalies below -3 sd the corresponding occurrence rate drops to about 10. Spatial correlation studies revealed that extreme winters over regions in Europe, North America or Asia were very limited geographically, with time series of the surface temperature anomalies for these regions having mutual correlation coefficients of about 0.2. The temporal occurrence rates of winters (summers) having sd below -3 (above +3) were very asymmetric and sporadic, suggesting that such events arise from stochastic influences. Multi-year sequences of extreme winters were comparatively rare events. Detailed analysis revealed that the temporal and spatial evolution of the monthly surface temperature anomalies associated with an individual extreme winter were well replicated in the simulation, as were daily time series of such anomalies. Apart from an influence of the North Atlantic Oscillation on extreme winters in Europe, other prominent climatic oscillations were very poorly correlated with such winters. Rather modest winter temperature anomalies were found in the southern hemisphere. (orig.)

Organizational Structure in Multi-Campus Community Junior Colleges/Districts.

Science.gov (United States)

Chang, Nai-Kwang

The administrative structures and functions of multi-campus colleges/districts of the same size as the Community College of Denver (CCD) were investigated to determine the positive and negative aspects of multi-campus colleges vs. separate independent colleges and of centralization vs. decentralization of 38 administrative functions. A survey of…

Community structure in real-world networks from a non-parametrical synchronization-based dynamical approach

International Nuclear Information System (INIS)

Moujahid, Abdelmalik; D’Anjou, Alicia; Cases, Blanca

2012-01-01

Highlights: ► A synchronization-based algorithm for community structure detection is proposed. ► We model a complex network based on coupled nonidentical chaotic Rössler oscillators. ► The interaction scheme contemplates an uniformly increasing coupling force. ► The frequencies of oscillators are adapted according to a parameterless mechanism. ► The adaptation mechanism reveals the community structure present in the network. - Abstract: This work analyzes the problem of community structure in real-world networks based on the synchronization of nonidentical coupled chaotic Rössler oscillators each one characterized by a defined natural frequency, and coupled according to a predefined network topology. The interaction scheme contemplates an uniformly increasing coupling force to simulate a society in which the association between the agents grows in time. To enhance the stability of the correlated states that could emerge from the synchronization process, we propose a parameterless mechanism that adapts the characteristic frequencies of coupled oscillators according to a dynamic connectivity matrix deduced from correlated data. We show that the characteristic frequency vector that results from the adaptation mechanism reveals the underlying community structure present in the network.

Community detection for networks with unipartite and bipartite structure

Science.gov (United States)

Chang, Chang; Tang, Chao

2014-09-01

Finding community structures in networks is important in network science, technology, and applications. To date, most algorithms that aim to find community structures only focus either on unipartite or bipartite networks. A unipartite network consists of one set of nodes and a bipartite network consists of two nonoverlapping sets of nodes with only links joining the nodes in different sets. However, a third type of network exists, defined here as the mixture network. Just like a bipartite network, a mixture network also consists of two sets of nodes, but some nodes may simultaneously belong to two sets, which breaks the nonoverlapping restriction of a bipartite network. The mixture network can be considered as a general case, with unipartite and bipartite networks viewed as its limiting cases. A mixture network can represent not only all the unipartite and bipartite networks, but also a wide range of real-world networks that cannot be properly represented as either unipartite or bipartite networks in fields such as biology and social science. Based on this observation, we first propose a probabilistic model that can find modules in unipartite, bipartite, and mixture networks in a unified framework based on the link community model for a unipartite undirected network [B Ball et al (2011 Phys. Rev. E 84 036103)]. We test our algorithm on synthetic networks (both overlapping and nonoverlapping communities) and apply it to two real-world networks: a southern women bipartite network and a human transcriptional regulatory mixture network. The results suggest that our model performs well for all three types of networks, is competitive with other algorithms for unipartite or bipartite networks, and is applicable to real-world networks.

On the relation between ionospheric winter anomalies and solar wind

International Nuclear Information System (INIS)

Rumi, G.C.

2001-01-01

There are two different winter anomalies. A small one that appears in connection with ionization at relatively low latitudes in the bottom of the D-region of the ionosphere. There, the electron densities in the winter happen to be less than should be expected. On the other hand, the classic winter anomaly is present when in the winter the upper D-region, again at relatively low latitudes, has more ionization than should be expected. Both these effects are due to the slant compression of the geomagnetic field produced by the solar wind in the wind in the winter season (which is, of course, the summer season when reference is made to events in the other hemisphere). It is shown that the small winter anomaly is a consequence of a hemispheric imbalance in the flux of galactic cosmic rays determined by the obliquely distorted geomagnetic field. It is shown that the standard winter anomaly can be ascribed to the influx of a super solar wind, which penetrates into the Earth's polar atmosphere down to E-region, heights and, duly concentrated through a funneling action at the winter pole of the distorted geomagnetic field, slows down the winter polar vortex. An equatorward motion of the polar air with its content of nitric oxide brings about the excess of ionization in the upper D-region at lower latitudes. The experimentally observed rhythmic recurrence of the upper winter anomaly is correlated to a possible rhythmic recurrence of the super solar wind. The actual detection of the upper winter anomaly could yield some information on the velocity of the basic solar wind. A by-product of the present analysis, the determination of Γ, the coefficient of collisional detachment of the electrons from the O 2 - ions, is presented in the Appendix

On the relation between ionospheric winter anomalies and solar wind

Energy Technology Data Exchange (ETDEWEB)

Rumi, G.C. [Lecco, (Italy)

2001-06-01

There are two different winter anomalies. A small one that appears in connection with ionization at relatively low latitudes in the bottom of the D-region of the ionosphere. There, the electron densities in the winter happen to be less than should be expected. On the other hand, the classic winter anomaly is present when in the winter the upper D-region, again at relatively low latitudes, has more ionization than should be expected. Both these effects are due to the slant compression of the geomagnetic field produced by the solar wind in the wind in the winter season (which is, of course, the summer season when reference is made to events in the other hemisphere). It is shown that the small winter anomaly is a consequence of a hemispheric imbalance in the flux of galactic cosmic rays determined by the obliquely distorted geomagnetic field. It is shown that the standard winter anomaly can be ascribed to the influx of a super solar wind, which penetrates into the Earth's polar atmosphere down to E-region, heights and, duly concentrated through a funneling action at the winter pole of the distorted geomagnetic field, slows down the winter polar vortex. An equatorward motion of the polar air with its content of nitric oxide brings about the excess of ionization in the upper D-region at lower latitudes. The experimentally observed rhythmic recurrence of the upper winter anomaly is correlated to a possible rhythmic recurrence of the super solar wind. The actual detection of the upper winter anomaly could yield some information on the velocity of the basic solar wind. A by-product of the present analysis, the determination of {gamma}, the coefficient of collisional detachment of the electrons from the O{sub 2} {sup -} ions, is presented in the Appendix.

Effect of streptomycin treatment on bacterial community structure in the apple phyllosphere.

Directory of Open Access Journals (Sweden)

Erika Yashiro

Full Text Available We studied the effect of many years of streptomycin use in apple orchards on the proportion of phyllosphere bacteria resistant to streptomycin and bacterial community structure. Leaf samples were collected during early July through early September from four orchards that had been sprayed with streptomycin during spring of most years for at least 10 years and four orchards that had not been sprayed. The percentage of cultured phyllosphere bacteria resistant to streptomycin at non-sprayed orchards (mean of 65% was greater than at sprayed orchards (mean of 50% (P = 0.0271. For each orchard, a 16S rRNA gene clone library was constructed from leaf samples. Proteobacteria dominated the bacterial communities at all orchards, accounting for 71 of 104 OTUs (determined at 97% sequence similarity and 93% of all sequences. The genera Massilia, Methylobacterium, Pantoea, Pseudomonas, and Sphingomonas were shared across all sites. Shannon and Simpson's diversity indices and Pielou's evenness index were similar among orchards regardless of streptomycin use. Analysis of Similarity (ANOSIM indicated that long-term streptomycin treatment did not account for the observed variability in community structure among orchards (R = -0.104, P = 0.655. Other variables, including time of summer, temperature and time at sampling, and relative distance of the orchards from each other, also had no significant effect on bacterial community structure. We conclude that factors other than streptomycin exposure drive both the proportion of streptomycin-resistant bacteria and phylogenetic makeup of bacterial communities in the apple phyllosphere in middle to late summer.

The role of macrobiota in structuring microbial communities along rocky shores

Directory of Open Access Journals (Sweden)

Catherine A. Pfister

2014-10-01

Full Text Available Rocky shore microbial diversity presents an excellent system to test for microbial habitat specificity or generality, enabling us to decipher how common macrobiota shape microbial community structure. At two coastal locations in the northeast Pacific Ocean, we show that microbial composition was significantly different between inert surfaces, the biogenic surfaces that included rocky shore animals and an alga, and the water column plankton. While all sampled entities had a core of common OTUs, rare OTUs drove differences among biotic and abiotic substrates. For the mussel Mytilus californianus, the shell surface harbored greater alpha diversity compared to internal tissues of the gill and siphon. Strikingly, a 7-year experimental removal of this mussel from tidepools did not significantly alter the microbial community structure of microbes associated with inert surfaces when compared with unmanipulated tidepools. However, bacterial taxa associated with nitrate reduction had greater relative abundance with mussels present, suggesting an impact of increased animal-derived nitrogen on a subset of microbial metabolism. Because the presence of mussels did not affect the structure and diversity of the microbial community on adjacent inert substrates, microbes in this rocky shore environment may be predominantly affected through direct physical association with macrobiota.

[Effects of agricultural practices on community structure of arbuscular mycorrhizal fungi in agricultural ecosystem: a review].

Science.gov (United States)

Sheng, Ping-Ping; Li, Min; Liu, Run-Jin

2011-06-01

Arbuscular mycorrhizal (AM) fungi are rich in diversity in agricultural ecosystem, playing a vital role based on their unique community structure. Host plants and environmental factors have important effects on AM fungal community structure, so do the agricultural practices which deserve to pay attention to. This paper summarized the research advances in the effects of agricultural practices such as irrigation, fertilization, crop rotation, intercropping, tillage, and pesticide application on AM fungal community structure, analyzed the related possible mechanisms, discussed the possible ways in improving AM fungal community structure in agricultural ecosystem, and put forward a set of countermeasures, i.e., improving fertilization system and related integrated techniques, increasing plant diversity in agricultural ecosystem, and inoculating AM fungi, to enhance the AM fungal diversity in agricultural ecosystem. The existing problems in current agricultural practices and further research directions were also proposed.

Coming to grips with nuclear winter

International Nuclear Information System (INIS)

Scherr, S.J.

1985-01-01

This editorial examines the politics related to the concept of nuclear winter which is a term used to describe temperature changes brought on by the injection of smoke into the atmosphere by the massive fires set off by nuclear explosions. The climate change alone could cause crop failures and lead to massive starvation. The author suggests that the prospect of a nuclear winter should be a deterrent to any nuclear exchange