WorldWideScience

Sample records for wavelet-based compression algorithm

  1. Evaluation of a wavelet-based compression algorithm applied to the silicon drift detectors data of the ALICE experiment at CERN

    International Nuclear Information System (INIS)

    Falchieri, Davide; Gandolfi, Enzo; Masotti, Matteo

    2004-01-01

    This paper evaluates the performances of a wavelet-based compression algorithm applied to the data produced by the silicon drift detectors of the ALICE experiment at CERN. This compression algorithm is a general purpose lossy technique, in other words, its application could prove useful even on a wide range of other data reduction's problems. In particular the design targets relevant for our wavelet-based compression algorithm are the following ones: a high-compression coefficient, a reconstruction error as small as possible and a very limited execution time. Interestingly, the results obtained are quite close to the ones achieved by the algorithm implemented in the first prototype of the chip CARLOS, the chip that will be used in the silicon drift detectors readout chain

  2. Wavelet-based audio embedding and audio/video compression

    Science.gov (United States)

    Mendenhall, Michael J.; Claypoole, Roger L., Jr.

    2001-12-01

    Watermarking, traditionally used for copyright protection, is used in a new and exciting way. An efficient wavelet-based watermarking technique embeds audio information into a video signal. Several effective compression techniques are applied to compress the resulting audio/video signal in an embedded fashion. This wavelet-based compression algorithm incorporates bit-plane coding, index coding, and Huffman coding. To demonstrate the potential of this audio embedding and audio/video compression algorithm, we embed an audio signal into a video signal and then compress. Results show that overall compression rates of 15:1 can be achieved. The video signal is reconstructed with a median PSNR of nearly 33 dB. Finally, the audio signal is extracted from the compressed audio/video signal without error.

  3. Wavelet-based compression of pathological images for telemedicine applications

    Science.gov (United States)

    Chen, Chang W.; Jiang, Jianfei; Zheng, Zhiyong; Wu, Xue G.; Yu, Lun

    2000-05-01

    In this paper, we present the performance evaluation of wavelet-based coding techniques as applied to the compression of pathological images for application in an Internet-based telemedicine system. We first study how well suited the wavelet-based coding is as it applies to the compression of pathological images, since these images often contain fine textures that are often critical to the diagnosis of potential diseases. We compare the wavelet-based compression with the DCT-based JPEG compression in the DICOM standard for medical imaging applications. Both objective and subjective measures have been studied in the evaluation of compression performance. These studies are performed in close collaboration with expert pathologists who have conducted the evaluation of the compressed pathological images and communication engineers and information scientists who designed the proposed telemedicine system. These performance evaluations have shown that the wavelet-based coding is suitable for the compression of various pathological images and can be integrated well with the Internet-based telemedicine systems. A prototype of the proposed telemedicine system has been developed in which the wavelet-based coding is adopted for the compression to achieve bandwidth efficient transmission and therefore speed up the communications between the remote terminal and the central server of the telemedicine system.

  4. Hyperspectral image compressing using wavelet-based method

    Science.gov (United States)

    Yu, Hui; Zhang, Zhi-jie; Lei, Bo; Wang, Chen-sheng

    2017-10-01

    Hyperspectral imaging sensors can acquire images in hundreds of continuous narrow spectral bands. Therefore each object presented in the image can be identified from their spectral response. However, such kind of imaging brings a huge amount of data, which requires transmission, processing, and storage resources for both airborne and space borne imaging. Due to the high volume of hyperspectral image data, the exploration of compression strategies has received a lot of attention in recent years. Compression of hyperspectral data cubes is an effective solution for these problems. Lossless compression of the hyperspectral data usually results in low compression ratio, which may not meet the available resources; on the other hand, lossy compression may give the desired ratio, but with a significant degradation effect on object identification performance of the hyperspectral data. Moreover, most hyperspectral data compression techniques exploits the similarities in spectral dimensions; which requires bands reordering or regrouping, to make use of the spectral redundancy. In this paper, we explored the spectral cross correlation between different bands, and proposed an adaptive band selection method to obtain the spectral bands which contain most of the information of the acquired hyperspectral data cube. The proposed method mainly consist three steps: First, the algorithm decomposes the original hyperspectral imagery into a series of subspaces based on the hyper correlation matrix of the hyperspectral images between different bands. And then the Wavelet-based algorithm is applied to the each subspaces. At last the PCA method is applied to the wavelet coefficients to produce the chosen number of components. The performance of the proposed method was tested by using ISODATA classification method.

  5. Fast and robust wavelet-based dynamic range compression and contrast enhancement model with color restoration

    Science.gov (United States)

    Unaldi, Numan; Asari, Vijayan K.; Rahman, Zia-ur

    2009-05-01

    Recently we proposed a wavelet-based dynamic range compression algorithm to improve the visual quality of digital images captured from high dynamic range scenes with non-uniform lighting conditions. The fast image enhancement algorithm that provides dynamic range compression, while preserving the local contrast and tonal rendition, is also a good candidate for real time video processing applications. Although the colors of the enhanced images produced by the proposed algorithm are consistent with the colors of the original image, the proposed algorithm fails to produce color constant results for some "pathological" scenes that have very strong spectral characteristics in a single band. The linear color restoration process is the main reason for this drawback. Hence, a different approach is required for the final color restoration process. In this paper the latest version of the proposed algorithm, which deals with this issue is presented. The results obtained by applying the algorithm to numerous natural images show strong robustness and high image quality.

  6. Research on Wavelet-Based Algorithm for Image Contrast Enhancement

    Institute of Scientific and Technical Information of China (English)

    Wu Ying-qian; Du Pei-jun; Shi Peng-fei

    2004-01-01

    A novel wavelet-based algorithm for image enhancement is proposed in the paper. On the basis of multiscale analysis, the proposed algorithm solves efficiently the problem of noise over-enhancement, which commonly occurs in the traditional methods for contrast enhancement. The decomposed coefficients at same scales are processed by a nonlinear method, and the coefficients at different scales are enhanced in different degree. During the procedure, the method takes full advantage of the properties of Human visual system so as to achieve better performance. The simulations demonstrate that these characters of the proposed approach enable it to fully enhance the content in images, to efficiently alleviate the enhancement of noise and to achieve much better enhancement effect than the traditional approaches.

  7. Study and analysis of wavelet based image compression techniques

    African Journals Online (AJOL)

    user

    Discrete Wavelet Transform (DWT) is a recently developed compression ... serve emerging areas of mobile multimedia and internet communication, ..... In global thresholding the best trade-off between PSNR and compression is provided by.

  8. Fusion of Thresholding Rules During Wavelet-Based Noisy Image Compression

    Directory of Open Access Journals (Sweden)

    Bekhtin Yury

    2016-01-01

    Full Text Available The new method for combining semisoft thresholding rules during wavelet-based data compression of images with multiplicative noise is suggested. The method chooses the best thresholding rule and the threshold value using the proposed criteria which provide the best nonlinear approximations and take into consideration errors of quantization. The results of computer modeling have shown that the suggested method provides relatively good image quality after restoration in the sense of some criteria such as PSNR, SSIM, etc.

  9. A wavelet-based PWTD algorithm-accelerated time domain surface integral equation solver

    KAUST Repository

    Liu, Yang

    2015-10-26

    © 2015 IEEE. The multilevel plane-wave time-domain (PWTD) algorithm allows for fast and accurate analysis of transient scattering from, and radiation by, electrically large and complex structures. When used in tandem with marching-on-in-time (MOT)-based surface integral equation (SIE) solvers, it reduces the computational and memory costs of transient analysis from equation and equation to equation and equation, respectively, where Nt and Ns denote the number of temporal and spatial unknowns (Ergin et al., IEEE Trans. Antennas Mag., 41, 39-52, 1999). In the past, PWTD-accelerated MOT-SIE solvers have been applied to transient problems involving half million spatial unknowns (Shanker et al., IEEE Trans. Antennas Propag., 51, 628-641, 2003). Recently, a scalable parallel PWTD-accelerated MOT-SIE solver that leverages a hiearchical parallelization strategy has been developed and successfully applied to the transient problems involving ten million spatial unknowns (Liu et. al., in URSI Digest, 2013). We further enhanced the capabilities of this solver by implementing a compression scheme based on local cosine wavelet bases (LCBs) that exploits the sparsity in the temporal dimension (Liu et. al., in URSI Digest, 2014). Specifically, the LCB compression scheme was used to reduce the memory requirement of the PWTD ray data and computational cost of operations in the PWTD translation stage.

  10. WAVELET-BASED ALGORITHM FOR DETECTION OF BEARING FAULTS IN A GAS TURBINE ENGINE

    Directory of Open Access Journals (Sweden)

    Sergiy Enchev

    2014-07-01

    Full Text Available Presented is a gas turbine engine bearing diagnostic system that integrates information from various advanced vibration analysis techniques to achieve robust bearing health state awareness. This paper presents a computational algorithm for identifying power frequency variations and integer harmonics by using wavelet-based transform. The continuous wavelet transform with  the complex Morlet wavelet is adopted to detect the harmonics presented in a power signal. The algorithm based on the discrete stationary wavelet transform is adopted to denoise the wavelet ridges.

  11. Wavelet-based de-noising algorithm for images acquired with parallel magnetic resonance imaging (MRI)

    International Nuclear Information System (INIS)

    Delakis, Ioannis; Hammad, Omer; Kitney, Richard I

    2007-01-01

    Wavelet-based de-noising has been shown to improve image signal-to-noise ratio in magnetic resonance imaging (MRI) while maintaining spatial resolution. Wavelet-based de-noising techniques typically implemented in MRI require that noise displays uniform spatial distribution. However, images acquired with parallel MRI have spatially varying noise levels. In this work, a new algorithm for filtering images with parallel MRI is presented. The proposed algorithm extracts the edges from the original image and then generates a noise map from the wavelet coefficients at finer scales. The noise map is zeroed at locations where edges have been detected and directional analysis is also used to calculate noise in regions of low-contrast edges that may not have been detected. The new methodology was applied on phantom and brain images and compared with other applicable de-noising techniques. The performance of the proposed algorithm was shown to be comparable with other techniques in central areas of the images, where noise levels are high. In addition, finer details and edges were maintained in peripheral areas, where noise levels are low. The proposed methodology is fully automated and can be applied on final reconstructed images without requiring sensitivity profiles or noise matrices of the receiver coils, therefore making it suitable for implementation in a clinical MRI setting

  12. DNABIT Compress - Genome compression algorithm.

    Science.gov (United States)

    Rajarajeswari, Pothuraju; Apparao, Allam

    2011-01-22

    Data compression is concerned with how information is organized in data. Efficient storage means removal of redundancy from the data being stored in the DNA molecule. Data compression algorithms remove redundancy and are used to understand biologically important molecules. We present a compression algorithm, "DNABIT Compress" for DNA sequences based on a novel algorithm of assigning binary bits for smaller segments of DNA bases to compress both repetitive and non repetitive DNA sequence. Our proposed algorithm achieves the best compression ratio for DNA sequences for larger genome. Significantly better compression results show that "DNABIT Compress" algorithm is the best among the remaining compression algorithms. While achieving the best compression ratios for DNA sequences (Genomes),our new DNABIT Compress algorithm significantly improves the running time of all previous DNA compression programs. Assigning binary bits (Unique BIT CODE) for (Exact Repeats, Reverse Repeats) fragments of DNA sequence is also a unique concept introduced in this algorithm for the first time in DNA compression. This proposed new algorithm could achieve the best compression ratio as much as 1.58 bits/bases where the existing best methods could not achieve a ratio less than 1.72 bits/bases.

  13. Applications of wavelet-based compression to multidimensional earth science data

    Energy Technology Data Exchange (ETDEWEB)

    Bradley, J.N.; Brislawn, C.M.

    1993-01-01

    A data compression algorithm involving vector quantization (VQ) and the discrete wavelet transform (DWT) is applied to two different types of multidimensional digital earth-science data. The algorithm (WVQ) is optimized for each particular application through an optimization procedure that assigns VQ parameters to the wavelet transform subbands subject to constraints on compression ratio and encoding complexity. Preliminary results of compressing global ocean model data generated on a Thinking Machines CM-200 supercomputer are presented. The WVQ scheme is used in both a predictive and nonpredictive mode. Parameters generated by the optimization algorithm axe reported, as are signal-to-noise ratio (SNR) measurements of actual quantized data. The problem of extrapolating hydrodynamic variables across the continental landmasses in order to compute the DWT on a rectangular grid is discussed. Results are also presented for compressing Landsat TM 7-band data using the WVQ scheme.The formulation of the optimization problem is presented along with SNR measurements of actual quantized data. Postprocessing applications are considered in which the seven spectral bands are clustered into 256 clusters using a k-means algorithm and analyzed using the Los Alamos multispectral data analysis program, SPECTRUM, both before and after being compressed using the WVQ program.

  14. Applications of wavelet-based compression to multidimensional earth science data

    Energy Technology Data Exchange (ETDEWEB)

    Bradley, J.N.; Brislawn, C.M.

    1993-02-01

    A data compression algorithm involving vector quantization (VQ) and the discrete wavelet transform (DWT) is applied to two different types of multidimensional digital earth-science data. The algorithm (WVQ) is optimized for each particular application through an optimization procedure that assigns VQ parameters to the wavelet transform subbands subject to constraints on compression ratio and encoding complexity. Preliminary results of compressing global ocean model data generated on a Thinking Machines CM-200 supercomputer are presented. The WVQ scheme is used in both a predictive and nonpredictive mode. Parameters generated by the optimization algorithm axe reported, as are signal-to-noise ratio (SNR) measurements of actual quantized data. The problem of extrapolating hydrodynamic variables across the continental landmasses in order to compute the DWT on a rectangular grid is discussed. Results are also presented for compressing Landsat TM 7-band data using the WVQ scheme.The formulation of the optimization problem is presented along with SNR measurements of actual quantized data. Postprocessing applications are considered in which the seven spectral bands are clustered into 256 clusters using a k-means algorithm and analyzed using the Los Alamos multispectral data analysis program, SPECTRUM, both before and after being compressed using the WVQ program.

  15. Wavelet-Based Watermarking and Compression for ECG Signals with Verification Evaluation

    Directory of Open Access Journals (Sweden)

    Kuo-Kun Tseng

    2014-02-01

    Full Text Available In the current open society and with the growth of human rights, people are more and more concerned about the privacy of their information and other important data. This study makes use of electrocardiography (ECG data in order to protect individual information. An ECG signal can not only be used to analyze disease, but also to provide crucial biometric information for identification and authentication. In this study, we propose a new idea of integrating electrocardiogram watermarking and compression approach, which has never been researched before. ECG watermarking can ensure the confidentiality and reliability of a user’s data while reducing the amount of data. In the evaluation, we apply the embedding capacity, bit error rate (BER, signal-to-noise ratio (SNR, compression ratio (CR, and compressed-signal to noise ratio (CNR methods to assess the proposed algorithm. After comprehensive evaluation the final results show that our algorithm is robust and feasible.

  16. A Wavelet-Based Algorithm for the Spatial Analysis of Poisson Data

    Science.gov (United States)

    Freeman, P. E.; Kashyap, V.; Rosner, R.; Lamb, D. Q.

    2002-01-01

    Wavelets are scalable, oscillatory functions that deviate from zero only within a limited spatial regime and have average value zero, and thus may be used to simultaneously characterize the shape, location, and strength of astronomical sources. But in addition to their use as source characterizers, wavelet functions are rapidly gaining currency within the source detection field. Wavelet-based source detection involves the correlation of scaled wavelet functions with binned, two-dimensional image data. If the chosen wavelet function exhibits the property of vanishing moments, significantly nonzero correlation coefficients will be observed only where there are high-order variations in the data; e.g., they will be observed in the vicinity of sources. Source pixels are identified by comparing each correlation coefficient with its probability sampling distribution, which is a function of the (estimated or a priori known) background amplitude. In this paper, we describe the mission-independent, wavelet-based source detection algorithm ``WAVDETECT,'' part of the freely available Chandra Interactive Analysis of Observations (CIAO) software package. Our algorithm uses the Marr, or ``Mexican Hat'' wavelet function, but may be adapted for use with other wavelet functions. Aspects of our algorithm include: (1) the computation of local, exposure-corrected normalized (i.e., flat-fielded) background maps; (2) the correction for exposure variations within the field of view (due to, e.g., telescope support ribs or the edge of the field); (3) its applicability within the low-counts regime, as it does not require a minimum number of background counts per pixel for the accurate computation of source detection thresholds; (4) the generation of a source list in a manner that does not depend upon a detailed knowledge of the point spread function (PSF) shape; and (5) error analysis. These features make our algorithm considerably more general than previous methods developed for the

  17. Wavelet-based compression with ROI coding support for mobile access to DICOM images over heterogeneous radio networks.

    Science.gov (United States)

    Maglogiannis, Ilias; Doukas, Charalampos; Kormentzas, George; Pliakas, Thomas

    2009-07-01

    Most of the commercial medical image viewers do not provide scalability in image compression and/or region of interest (ROI) encoding/decoding. Furthermore, these viewers do not take into consideration the special requirements and needs of a heterogeneous radio setting that is constituted by different access technologies [e.g., general packet radio services (GPRS)/ universal mobile telecommunications system (UMTS), wireless local area network (WLAN), and digital video broadcasting (DVB-H)]. This paper discusses a medical application that contains a viewer for digital imaging and communications in medicine (DICOM) images as a core module. The proposed application enables scalable wavelet-based compression, retrieval, and decompression of DICOM medical images and also supports ROI coding/decoding. Furthermore, the presented application is appropriate for use by mobile devices activating in heterogeneous radio settings. In this context, performance issues regarding the usage of the proposed application in the case of a prototype heterogeneous system setup are also discussed.

  18. Wavelet-based Encoding Scheme for Controlling Size of Compressed ECG Segments in Telecardiology Systems.

    Science.gov (United States)

    Al-Busaidi, Asiya M; Khriji, Lazhar; Touati, Farid; Rasid, Mohd Fadlee; Mnaouer, Adel Ben

    2017-09-12

    One of the major issues in time-critical medical applications using wireless technology is the size of the payload packet, which is generally designed to be very small to improve the transmission process. Using small packets to transmit continuous ECG data is still costly. Thus, data compression is commonly used to reduce the huge amount of ECG data transmitted through telecardiology devices. In this paper, a new ECG compression scheme is introduced to ensure that the compressed ECG segments fit into the available limited payload packets, while maintaining a fixed CR to preserve the diagnostic information. The scheme automatically divides the ECG block into segments, while maintaining other compression parameters fixed. This scheme adopts discrete wavelet transform (DWT) method to decompose the ECG data, bit-field preserving (BFP) method to preserve the quality of the DWT coefficients, and a modified running-length encoding (RLE) scheme to encode the coefficients. The proposed dynamic compression scheme showed promising results with a percentage packet reduction (PR) of about 85.39% at low percentage root-mean square difference (PRD) values, less than 1%. ECG records from MIT-BIH Arrhythmia Database were used to test the proposed method. The simulation results showed promising performance that satisfies the needs of portable telecardiology systems, like the limited payload size and low power consumption.

  19. Neuro-Fuzzy Wavelet Based Adaptive MPPT Algorithm for Photovoltaic Systems

    Directory of Open Access Journals (Sweden)

    Syed Zulqadar Hassan

    2017-03-01

    Full Text Available An intelligent control of photovoltaics is necessary to ensure fast response and high efficiency under different weather conditions. This is often arduous to accomplish using traditional linear controllers, as photovoltaic systems are nonlinear and contain several uncertainties. Based on the analysis of the existing literature of Maximum Power Point Tracking (MPPT techniques, a high performance neuro-fuzzy indirect wavelet-based adaptive MPPT control is developed in this work. The proposed controller combines the reasoning capability of fuzzy logic, the learning capability of neural networks and the localization properties of wavelets. In the proposed system, the Hermite Wavelet-embedded Neural Fuzzy (HWNF-based gradient estimator is adopted to estimate the gradient term and makes the controller indirect. The performance of the proposed controller is compared with different conventional and intelligent MPPT control techniques. MATLAB results show the superiority over other existing techniques in terms of fast response, power quality and efficiency.

  20. DNABIT Compress – Genome compression algorithm

    OpenAIRE

    Rajarajeswari, Pothuraju; Apparao, Allam

    2011-01-01

    Data compression is concerned with how information is organized in data. Efficient storage means removal of redundancy from the data being stored in the DNA molecule. Data compression algorithms remove redundancy and are used to understand biologically important molecules. We present a compression algorithm, “DNABIT Compress” for DNA sequences based on a novel algorithm of assigning binary bits for smaller segments of DNA bases to compress both repetitive and non repetitive DNA sequence. Our ...

  1. DNABIT Compress – Genome compression algorithm

    Science.gov (United States)

    Rajarajeswari, Pothuraju; Apparao, Allam

    2011-01-01

    Data compression is concerned with how information is organized in data. Efficient storage means removal of redundancy from the data being stored in the DNA molecule. Data compression algorithms remove redundancy and are used to understand biologically important molecules. We present a compression algorithm, “DNABIT Compress” for DNA sequences based on a novel algorithm of assigning binary bits for smaller segments of DNA bases to compress both repetitive and non repetitive DNA sequence. Our proposed algorithm achieves the best compression ratio for DNA sequences for larger genome. Significantly better compression results show that “DNABIT Compress” algorithm is the best among the remaining compression algorithms. While achieving the best compression ratios for DNA sequences (Genomes),our new DNABIT Compress algorithm significantly improves the running time of all previous DNA compression programs. Assigning binary bits (Unique BIT CODE) for (Exact Repeats, Reverse Repeats) fragments of DNA sequence is also a unique concept introduced in this algorithm for the first time in DNA compression. This proposed new algorithm could achieve the best compression ratio as much as 1.58 bits/bases where the existing best methods could not achieve a ratio less than 1.72 bits/bases. PMID:21383923

  2. Improving performance of wavelet-based image denoising algorithm using complex diffusion process

    DEFF Research Database (Denmark)

    Nadernejad, Ehsan; Sharifzadeh, Sara; Korhonen, Jari

    2012-01-01

    using a variety of standard images and its performance has been compared against several de-noising algorithms known from the prior art. Experimental results show that the proposed algorithm preserves the edges better and in most cases, improves the measured visual quality of the denoised images......Image enhancement and de-noising is an essential pre-processing step in many image processing algorithms. In any image de-noising algorithm, the main concern is to keep the interesting structures of the image. Such interesting structures often correspond to the discontinuities (edges...... in comparison to the existing methods known from the literature. The improvement is obtained without excessive computational cost, and the algorithm works well on a wide range of different types of noise....

  3. Wavelet based edge detection algorithm for web surface inspection of coated board web

    Energy Technology Data Exchange (ETDEWEB)

    Barjaktarovic, M; Petricevic, S, E-mail: slobodan@etf.bg.ac.r [School of Electrical Engineering, Bulevar Kralja Aleksandra 73, 11000 Belgrade (Serbia)

    2010-07-15

    This paper presents significant improvement of the already installed vision system. System was designed for real time coated board inspection. The improvement is achieved with development of a new algorithm for edge detection. The algorithm is based on the redundant (undecimated) wavelet transform. Compared to the existing algorithm better delineation of edges is achieved. This yields to better defect detection probability and more accurate geometrical classification, which will provide additional reduction of waste. Also, algorithm will provide detailed classification and more reliably tracking of defects. This improvement requires minimal changes in processing hardware, only a replacement of the graphic card would be needed, adding only negligibly to the system cost. Other changes are accomplished entirely in the image processing software.

  4. Orthonormal Wavelet Bases for Quantum Molecular Dynamics

    International Nuclear Information System (INIS)

    Tymczak, C.; Wang, X.

    1997-01-01

    We report on the use of compactly supported, orthonormal wavelet bases for quantum molecular-dynamics (Car-Parrinello) algorithms. A wavelet selection scheme is developed and tested for prototypical problems, such as the three-dimensional harmonic oscillator, the hydrogen atom, and the local density approximation to atomic and molecular systems. Our method shows systematic convergence with increased grid size, along with improvement on compression rates, thereby yielding an optimal grid for self-consistent electronic structure calculations. copyright 1997 The American Physical Society

  5. A wavelet-based PWTD algorithm-accelerated time domain surface integral equation solver

    KAUST Repository

    Liu, Yang; Yucel, Abdulkadir C.; Gilbert, Anna C.; Bagci, Hakan; Michielssen, Eric

    2015-01-01

    © 2015 IEEE. The multilevel plane-wave time-domain (PWTD) algorithm allows for fast and accurate analysis of transient scattering from, and radiation by, electrically large and complex structures. When used in tandem with marching-on-in-time (MOT

  6. Adaptive algorithms for a self-shielding wavelet-based Galerkin method

    International Nuclear Information System (INIS)

    Fournier, D.; Le Tellier, R.

    2009-01-01

    The treatment of the energy variable in deterministic neutron transport methods is based on a multigroup discretization, considering the flux and cross-sections to be constant within a group. In this case, a self-shielding calculation is mandatory to correct sections of resonant isotopes. In this paper, a different approach based on a finite element discretization on a wavelet basis is used. We propose adaptive algorithms constructed from error estimates. Such an approach is applied to within-group scattering source iterations. A first implementation is presented in the special case of the fine structure equation for an infinite homogeneous medium. Extension to spatially-dependent cases is discussed. (authors)

  7. A wavelet-based regularized reconstruction algorithm for SENSE parallel MRI with applications to neuroimaging

    International Nuclear Information System (INIS)

    Chaari, L.; Pesquet, J.Ch.; Chaari, L.; Ciuciu, Ph.; Benazza-Benyahia, A.

    2011-01-01

    To reduce scanning time and/or improve spatial/temporal resolution in some Magnetic Resonance Imaging (MRI) applications, parallel MRI acquisition techniques with multiple coils acquisition have emerged since the early 1990's as powerful imaging methods that allow a faster acquisition process. In these techniques, the full FOV image has to be reconstructed from the resulting acquired under sampled k-space data. To this end, several reconstruction techniques have been proposed such as the widely-used Sensitivity Encoding (SENSE) method. However, the reconstructed image generally presents artifacts when perturbations occur in both the measured data and the estimated coil sensitivity profiles. In this paper, we aim at achieving accurate image reconstruction under degraded experimental conditions (low magnetic field and high reduction factor), in which neither the SENSE method nor the Tikhonov regularization in the image domain give convincing results. To this end, we present a novel method for SENSE-based reconstruction which proceeds with regularization in the complex wavelet domain by promoting sparsity. The proposed approach relies on a fast algorithm that enables the minimization of regularized non-differentiable criteria including more general penalties than a classical l 1 term. To further enhance the reconstructed image quality, local convex constraints are added to the regularization process. In vivo human brain experiments carried out on Gradient-Echo (GRE) anatomical and Echo Planar Imaging (EPI) functional MRI data at 1.5 T indicate that our algorithm provides reconstructed images with reduced artifacts for high reduction factors. (authors)

  8. A wavelet-based ECG delineation algorithm for 32-bit integer online processing.

    Science.gov (United States)

    Di Marco, Luigi Y; Chiari, Lorenzo

    2011-04-03

    Since the first well-known electrocardiogram (ECG) delineator based on Wavelet Transform (WT) presented by Li et al. in 1995, a significant research effort has been devoted to the exploitation of this promising method. Its ability to reliably delineate the major waveform components (mono- or bi-phasic P wave, QRS, and mono- or bi-phasic T wave) would make it a suitable candidate for efficient online processing of ambulatory ECG signals. Unfortunately, previous implementations of this method adopt non-linear operators such as root mean square (RMS) or floating point algebra, which are computationally demanding. This paper presents a 32-bit integer, linear algebra advanced approach to online QRS detection and P-QRS-T waves delineation of a single lead ECG signal, based on WT. The QRS detector performance was validated on the MIT-BIH Arrhythmia Database (sensitivity Se = 99.77%, positive predictive value P+ = 99.86%, on 109010 annotated beats) and on the European ST-T Database (Se = 99.81%, P+ = 99.56%, on 788050 annotated beats). The ECG delineator was validated on the QT Database, showing a mean error between manual and automatic annotation below 1.5 samples for all fiducial points: P-onset, P-peak, P-offset, QRS-onset, QRS-offset, T-peak, T-offset, and a mean standard deviation comparable to other established methods. The proposed algorithm exhibits reliable QRS detection as well as accurate ECG delineation, in spite of a simple structure built on integer linear algebra.

  9. SeqCompress: an algorithm for biological sequence compression.

    Science.gov (United States)

    Sardaraz, Muhammad; Tahir, Muhammad; Ikram, Ataul Aziz; Bajwa, Hassan

    2014-10-01

    The growth of Next Generation Sequencing technologies presents significant research challenges, specifically to design bioinformatics tools that handle massive amount of data efficiently. Biological sequence data storage cost has become a noticeable proportion of total cost in the generation and analysis. Particularly increase in DNA sequencing rate is significantly outstripping the rate of increase in disk storage capacity, which may go beyond the limit of storage capacity. It is essential to develop algorithms that handle large data sets via better memory management. This article presents a DNA sequence compression algorithm SeqCompress that copes with the space complexity of biological sequences. The algorithm is based on lossless data compression and uses statistical model as well as arithmetic coding to compress DNA sequences. The proposed algorithm is compared with recent specialized compression tools for biological sequences. Experimental results show that proposed algorithm has better compression gain as compared to other existing algorithms. Copyright © 2014 Elsevier Inc. All rights reserved.

  10. WSNs Microseismic Signal Subsection Compression Algorithm Based on Compressed Sensing

    Directory of Open Access Journals (Sweden)

    Zhouzhou Liu

    2015-01-01

    Full Text Available For wireless network microseismic monitoring and the problems of low compression ratio and high energy consumption of communication, this paper proposes a segmentation compression algorithm according to the characteristics of the microseismic signals and the compression perception theory (CS used in the transmission process. The algorithm will be collected as a number of nonzero elements of data segmented basis, by reducing the number of combinations of nonzero elements within the segment to improve the accuracy of signal reconstruction, while taking advantage of the characteristics of compressive sensing theory to achieve a high compression ratio of the signal. Experimental results show that, in the quantum chaos immune clone refactoring (Q-CSDR algorithm for reconstruction algorithm, under the condition of signal sparse degree higher than 40, to be more than 0.4 of the compression ratio to compress the signal, the mean square error is less than 0.01, prolonging the network life by 2 times.

  11. Considerations and Algorithms for Compression of Sets

    DEFF Research Database (Denmark)

    Larsson, Jesper

    We consider compression of unordered sets of distinct elements. After a discus- sion of the general problem, we focus on compressing sets of fixed-length bitstrings in the presence of statistical information. We survey techniques from previous work, suggesting some adjustments, and propose a novel...... compression algorithm that allows transparent incorporation of various estimates for probability distribution. Our experimental results allow the conclusion that set compression can benefit from incorporat- ing statistics, using our method or variants of previously known techniques....

  12. Optimisation algorithms for ECG data compression.

    Science.gov (United States)

    Haugland, D; Heber, J G; Husøy, J H

    1997-07-01

    The use of exact optimisation algorithms for compressing digital electrocardiograms (ECGs) is demonstrated. As opposed to traditional time-domain methods, which use heuristics to select a small subset of representative signal samples, the problem of selecting the subset is formulated in rigorous mathematical terms. This approach makes it possible to derive algorithms guaranteeing the smallest possible reconstruction error when a bounded selection of signal samples is interpolated. The proposed model resembles well-known network models and is solved by a cubic dynamic programming algorithm. When applied to standard test problems, the algorithm produces a compressed representation for which the distortion is about one-half of that obtained by traditional time-domain compression techniques at reasonable compression ratios. This illustrates that, in terms of the accuracy of decoded signals, existing time-domain heuristics for ECG compression may be far from what is theoretically achievable. The paper is an attempt to bridge this gap.

  13. ERGC: an efficient referential genome compression algorithm.

    Science.gov (United States)

    Saha, Subrata; Rajasekaran, Sanguthevar

    2015-11-01

    Genome sequencing has become faster and more affordable. Consequently, the number of available complete genomic sequences is increasing rapidly. As a result, the cost to store, process, analyze and transmit the data is becoming a bottleneck for research and future medical applications. So, the need for devising efficient data compression and data reduction techniques for biological sequencing data is growing by the day. Although there exists a number of standard data compression algorithms, they are not efficient in compressing biological data. These generic algorithms do not exploit some inherent properties of the sequencing data while compressing. To exploit statistical and information-theoretic properties of genomic sequences, we need specialized compression algorithms. Five different next-generation sequencing data compression problems have been identified and studied in the literature. We propose a novel algorithm for one of these problems known as reference-based genome compression. We have done extensive experiments using five real sequencing datasets. The results on real genomes show that our proposed algorithm is indeed competitive and performs better than the best known algorithms for this problem. It achieves compression ratios that are better than those of the currently best performing algorithms. The time to compress and decompress the whole genome is also very promising. The implementations are freely available for non-commercial purposes. They can be downloaded from http://engr.uconn.edu/∼rajasek/ERGC.zip. rajasek@engr.uconn.edu. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  14. Algorithm for Compressing Time-Series Data

    Science.gov (United States)

    Hawkins, S. Edward, III; Darlington, Edward Hugo

    2012-01-01

    An algorithm based on Chebyshev polynomials effects lossy compression of time-series data or other one-dimensional data streams (e.g., spectral data) that are arranged in blocks for sequential transmission. The algorithm was developed for use in transmitting data from spacecraft scientific instruments to Earth stations. In spite of its lossy nature, the algorithm preserves the information needed for scientific analysis. The algorithm is computationally simple, yet compresses data streams by factors much greater than two. The algorithm is not restricted to spacecraft or scientific uses: it is applicable to time-series data in general. The algorithm can also be applied to general multidimensional data that have been converted to time-series data, a typical example being image data acquired by raster scanning. However, unlike most prior image-data-compression algorithms, this algorithm neither depends on nor exploits the two-dimensional spatial correlations that are generally present in images. In order to understand the essence of this compression algorithm, it is necessary to understand that the net effect of this algorithm and the associated decompression algorithm is to approximate the original stream of data as a sequence of finite series of Chebyshev polynomials. For the purpose of this algorithm, a block of data or interval of time for which a Chebyshev polynomial series is fitted to the original data is denoted a fitting interval. Chebyshev approximation has two properties that make it particularly effective for compressing serial data streams with minimal loss of scientific information: The errors associated with a Chebyshev approximation are nearly uniformly distributed over the fitting interval (this is known in the art as the "equal error property"); and the maximum deviations of the fitted Chebyshev polynomial from the original data have the smallest possible values (this is known in the art as the "min-max property").

  15. NRGC: a novel referential genome compression algorithm.

    Science.gov (United States)

    Saha, Subrata; Rajasekaran, Sanguthevar

    2016-11-15

    Next-generation sequencing techniques produce millions to billions of short reads. The procedure is not only very cost effective but also can be done in laboratory environment. The state-of-the-art sequence assemblers then construct the whole genomic sequence from these reads. Current cutting edge computing technology makes it possible to build genomic sequences from the billions of reads within a minimal cost and time. As a consequence, we see an explosion of biological sequences in recent times. In turn, the cost of storing the sequences in physical memory or transmitting them over the internet is becoming a major bottleneck for research and future medical applications. Data compression techniques are one of the most important remedies in this context. We are in need of suitable data compression algorithms that can exploit the inherent structure of biological sequences. Although standard data compression algorithms are prevalent, they are not suitable to compress biological sequencing data effectively. In this article, we propose a novel referential genome compression algorithm (NRGC) to effectively and efficiently compress the genomic sequences. We have done rigorous experiments to evaluate NRGC by taking a set of real human genomes. The simulation results show that our algorithm is indeed an effective genome compression algorithm that performs better than the best-known algorithms in most of the cases. Compression and decompression times are also very impressive. The implementations are freely available for non-commercial purposes. They can be downloaded from: http://www.engr.uconn.edu/~rajasek/NRGC.zip CONTACT: rajasek@engr.uconn.edu. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  16. Highly Efficient Compression Algorithms for Multichannel EEG.

    Science.gov (United States)

    Shaw, Laxmi; Rahman, Daleef; Routray, Aurobinda

    2018-05-01

    The difficulty associated with processing and understanding the high dimensionality of electroencephalogram (EEG) data requires developing efficient and robust compression algorithms. In this paper, different lossless compression techniques of single and multichannel EEG data, including Huffman coding, arithmetic coding, Markov predictor, linear predictor, context-based error modeling, multivariate autoregression (MVAR), and a low complexity bivariate model have been examined and their performances have been compared. Furthermore, a high compression algorithm named general MVAR and a modified context-based error modeling for multichannel EEG have been proposed. The resulting compression algorithm produces a higher relative compression ratio of 70.64% on average compared with the existing methods, and in some cases, it goes up to 83.06%. The proposed methods are designed to compress a large amount of multichannel EEG data efficiently so that the data storage and transmission bandwidth can be effectively used. These methods have been validated using several experimental multichannel EEG recordings of different subjects and publicly available standard databases. The satisfactory parametric measures of these methods, namely percent-root-mean square distortion, peak signal-to-noise ratio, root-mean-square error, and cross correlation, show their superiority over the state-of-the-art compression methods.

  17. Compressive sensing based algorithms for electronic defence

    CERN Document Server

    Mishra, Amit Kumar

    2017-01-01

    This book details some of the major developments in the implementation of compressive sensing in radio applications for electronic defense and warfare communication use. It provides a comprehensive background to the subject and at the same time describes some novel algorithms. It also investigates application value and performance-related parameters of compressive sensing in scenarios such as direction finding, spectrum monitoring, detection, and classification.

  18. Evaluation of Algorithms for Compressing Hyperspectral Data

    Science.gov (United States)

    Cook, Sid; Harsanyi, Joseph; Faber, Vance

    2003-01-01

    With EO-1 Hyperion in orbit NASA is showing their continued commitment to hyperspectral imaging (HSI). As HSI sensor technology continues to mature, the ever-increasing amounts of sensor data generated will result in a need for more cost effective communication and data handling systems. Lockheed Martin, with considerable experience in spacecraft design and developing special purpose onboard processors, has teamed with Applied Signal & Image Technology (ASIT), who has an extensive heritage in HSI spectral compression and Mapping Science (MSI) for JPEG 2000 spatial compression expertise, to develop a real-time and intelligent onboard processing (OBP) system to reduce HSI sensor downlink requirements. Our goal is to reduce the downlink requirement by a factor > 100, while retaining the necessary spectral and spatial fidelity of the sensor data needed to satisfy the many science, military, and intelligence goals of these systems. Our compression algorithms leverage commercial-off-the-shelf (COTS) spectral and spatial exploitation algorithms. We are currently in the process of evaluating these compression algorithms using statistical analysis and NASA scientists. We are also developing special purpose processors for executing these algorithms onboard a spacecraft.

  19. Efficient predictive algorithms for image compression

    CERN Document Server

    Rosário Lucas, Luís Filipe; Maciel de Faria, Sérgio Manuel; Morais Rodrigues, Nuno Miguel; Liberal Pagliari, Carla

    2017-01-01

    This book discusses efficient prediction techniques for the current state-of-the-art High Efficiency Video Coding (HEVC) standard, focusing on the compression of a wide range of video signals, such as 3D video, Light Fields and natural images. The authors begin with a review of the state-of-the-art predictive coding methods and compression technologies for both 2D and 3D multimedia contents, which provides a good starting point for new researchers in the field of image and video compression. New prediction techniques that go beyond the standardized compression technologies are then presented and discussed. In the context of 3D video, the authors describe a new predictive algorithm for the compression of depth maps, which combines intra-directional prediction, with flexible block partitioning and linear residue fitting. New approaches are described for the compression of Light Field and still images, which enforce sparsity constraints on linear models. The Locally Linear Embedding-based prediction method is in...

  20. Wavelet Based Diagnosis and Protection of Electric Motors

    OpenAIRE

    Khan, M. Abdesh Shafiel Kafiey; Rahman, M. Azizur

    2010-01-01

    In this chapter, a short review of conventional Fourier transforms and new wavelet based faults diagnostic and protection techniques for electric motors is presented. The new hybrid wavelet packet transform (WPT) and neural network (NN) based faults diagnostic algorithm is developed and implemented for electric motors. The proposed WPT and NN

  1. Innovative hyperchaotic encryption algorithm for compressed video

    Science.gov (United States)

    Yuan, Chun; Zhong, Yuzhuo; Yang, Shiqiang

    2002-12-01

    It is accepted that stream cryptosystem can achieve good real-time performance and flexibility which implements encryption by selecting few parts of the block data and header information of the compressed video stream. Chaotic random number generator, for example Logistics Map, is a comparatively promising substitute, but it is easily attacked by nonlinear dynamic forecasting and geometric information extracting. In this paper, we present a hyperchaotic cryptography scheme to encrypt the compressed video, which integrates Logistics Map with Z(232 - 1) field linear congruential algorithm to strengthen the security of the mono-chaotic cryptography, meanwhile, the real-time performance and flexibility of the chaotic sequence cryptography are maintained. It also integrates with the dissymmetrical public-key cryptography and implements encryption and identity authentification on control parameters at initialization phase. In accord with the importance of data in compressed video stream, encryption is performed in layered scheme. In the innovative hyperchaotic cryptography, the value and the updating frequency of control parameters can be changed online to satisfy the requirement of the network quality, processor capability and security requirement. The innovative hyperchaotic cryprography proves robust security by cryptoanalysis, shows good real-time performance and flexible implement capability through the arithmetic evaluating and test.

  2. Efficient algorithms of multidimensional γ-ray spectra compression

    International Nuclear Information System (INIS)

    Morhac, M.; Matousek, V.

    2006-01-01

    The efficient algorithms to compress multidimensional γ-ray events are presented. Two alternative kinds of compression algorithms based on both the adaptive orthogonal and randomizing transforms are proposed. In both algorithms we employ the reduction of data volume due to the symmetry of the γ-ray spectra

  3. Sparse data structure design for wavelet-based methods

    Directory of Open Access Journals (Sweden)

    Latu Guillaume

    2011-12-01

    Full Text Available This course gives an introduction to the design of efficient datatypes for adaptive wavelet-based applications. It presents some code fragments and benchmark technics useful to learn about the design of sparse data structures and adaptive algorithms. Material and practical examples are given, and they provide good introduction for anyone involved in the development of adaptive applications. An answer will be given to the question: how to implement and efficiently use the discrete wavelet transform in computer applications? A focus will be made on time-evolution problems, and use of wavelet-based scheme for adaptively solving partial differential equations (PDE. One crucial issue is that the benefits of the adaptive method in term of algorithmic cost reduction can not be wasted by overheads associated to sparse data management.

  4. Selecting a general-purpose data compression algorithm

    Science.gov (United States)

    Mathews, Gary Jason

    1995-01-01

    The National Space Science Data Center's Common Data Formate (CDF) is capable of storing many types of data such as scalar data items, vectors, and multidimensional arrays of bytes, integers, or floating point values. However, regardless of the dimensionality and data type, the data break down into a sequence of bytes that can be fed into a data compression function to reduce the amount of data without losing data integrity and thus remaining fully reconstructible. Because of the diversity of data types and high performance speed requirements, a general-purpose, fast, simple data compression algorithm is required to incorporate data compression into CDF. The questions to ask are how to evaluate and compare compression algorithms, and what compression algorithm meets all requirements. The object of this paper is to address these questions and determine the most appropriate compression algorithm to use within the CDF data management package that would be applicable to other software packages with similar data compression needs.

  5. Multi-source feature extraction and target recognition in wireless sensor networks based on adaptive distributed wavelet compression algorithms

    Science.gov (United States)

    Hortos, William S.

    2008-04-01

    Proposed distributed wavelet-based algorithms are a means to compress sensor data received at the nodes forming a wireless sensor network (WSN) by exchanging information between neighboring sensor nodes. Local collaboration among nodes compacts the measurements, yielding a reduced fused set with equivalent information at far fewer nodes. Nodes may be equipped with multiple sensor types, each capable of sensing distinct phenomena: thermal, humidity, chemical, voltage, or image signals with low or no frequency content as well as audio, seismic or video signals within defined frequency ranges. Compression of the multi-source data through wavelet-based methods, distributed at active nodes, reduces downstream processing and storage requirements along the paths to sink nodes; it also enables noise suppression and more energy-efficient query routing within the WSN. Targets are first detected by the multiple sensors; then wavelet compression and data fusion are applied to the target returns, followed by feature extraction from the reduced data; feature data are input to target recognition/classification routines; targets are tracked during their sojourns through the area monitored by the WSN. Algorithms to perform these tasks are implemented in a distributed manner, based on a partition of the WSN into clusters of nodes. In this work, a scheme of collaborative processing is applied for hierarchical data aggregation and decorrelation, based on the sensor data itself and any redundant information, enabled by a distributed, in-cluster wavelet transform with lifting that allows multiple levels of resolution. The wavelet-based compression algorithm significantly decreases RF bandwidth and other resource use in target processing tasks. Following wavelet compression, features are extracted. The objective of feature extraction is to maximize the probabilities of correct target classification based on multi-source sensor measurements, while minimizing the resource expenditures at

  6. Experimental scheme and restoration algorithm of block compression sensing

    Science.gov (United States)

    Zhang, Linxia; Zhou, Qun; Ke, Jun

    2018-01-01

    Compressed Sensing (CS) can use the sparseness of a target to obtain its image with much less data than that defined by the Nyquist sampling theorem. In this paper, we study the hardware implementation of a block compression sensing system and its reconstruction algorithms. Different block sizes are used. Two algorithms, the orthogonal matching algorithm (OMP) and the full variation minimum algorithm (TV) are used to obtain good reconstructions. The influence of block size on reconstruction is also discussed.

  7. Enhanced ATM Security using Biometric Authentication and Wavelet Based AES

    Directory of Open Access Journals (Sweden)

    Sreedharan Ajish

    2016-01-01

    Full Text Available The traditional ATM terminal customer recognition systems rely only on bank cards, passwords and such identity verification methods are not perfect and functions are too single. Biometrics-based authentication offers several advantages over other authentication methods, there has been a significant surge in the use of biometrics for user authentication in recent years. This paper presents a highly secured ATM banking system using biometric authentication and wavelet based Advanced Encryption Standard (AES algorithm. Two levels of security are provided in this proposed design. Firstly we consider the security level at the client side by providing biometric authentication scheme along with a password of 4-digit long. Biometric authentication is achieved by considering the fingerprint image of the client. Secondly we ensure a secured communication link between the client machine to the bank server using an optimized energy efficient and wavelet based AES processor. The fingerprint image is the data for encryption process and 4-digit long password is the symmetric key for the encryption process. The performance of ATM machine depends on ultra-high-speed encryption, very low power consumption, and algorithmic integrity. To get a low power consuming and ultra-high speed encryption at the ATM machine, an optimized and wavelet based AES algorithm is proposed. In this system biometric and cryptography techniques are used together for personal identity authentication to improve the security level. The design of the wavelet based AES processor is simulated and the design of the energy efficient AES processor is simulated in Quartus-II software. Simulation results ensure its proper functionality. A comparison among other research works proves its superiority.

  8. Wavelet-Based Poisson Solver for Use in Particle-in-Cell Simulations

    CERN Document Server

    Terzic, Balsa; Mihalcea, Daniel; Pogorelov, Ilya V

    2005-01-01

    We report on a successful implementation of a wavelet-based Poisson solver for use in 3D particle-in-cell simulations. One new aspect of our algorithm is its ability to treat the general (inhomogeneous) Dirichlet boundary conditions. The solver harnesses advantages afforded by the wavelet formulation, such as sparsity of operators and data sets, existence of effective preconditioners, and the ability simultaneously to remove numerical noise and further compress relevant data sets. Having tested our method as a stand-alone solver on two model problems, we merged it into IMPACT-T to obtain a fully functional serial PIC code. We present and discuss preliminary results of application of the new code to the modelling of the Fermilab/NICADD and AES/JLab photoinjectors.

  9. Wavelet-based Poisson Solver for use in Particle-In-Cell Simulations

    International Nuclear Information System (INIS)

    Terzic, B.; Mihalcea, D.; Bohn, C.L.; Pogorelov, I.V.

    2005-01-01

    We report on a successful implementation of a wavelet based Poisson solver for use in 3D particle-in-cell (PIC) simulations. One new aspect of our algorithm is its ability to treat the general(inhomogeneous) Dirichlet boundary conditions (BCs). The solver harnesses advantages afforded by the wavelet formulation, such as sparsity of operators and data sets, existence of effective preconditioners, and the ability simultaneously to remove numerical noise and further compress relevant data sets. Having tested our method as a stand-alone solver on two model problems, we merged it into IMPACT-T to obtain a fully functional serial PIC code. We present and discuss preliminary results of application of the new code to the modeling of the Fermilab/NICADD and AES/JLab photoinjectors

  10. Algorithms and data structures for grammar-compressed strings

    DEFF Research Database (Denmark)

    Cording, Patrick Hagge

    Textual databases for e.g. biological or web-data are growing rapidly, and it is often only feasible to store the data in compressed form. However, compressing the data comes at a price. Traditional algorithms for e.g. pattern matching requires all data to be decompressed - a computationally...... demanding task. In this thesis we design data structures for accessing and searching compressed data efficiently. Our results can be divided into two categories. In the first category we study problems related to pattern matching. In particular, we present new algorithms for counting and comparing...... substrings, and a new algorithm for finding all occurrences of a pattern in which we may insert gaps. In the other category we deal with accessing and decompressing parts of the compressed string. We show how to quickly access a single character of the compressed string, and present a data structure...

  11. Wavelet-based prediction of oil prices

    International Nuclear Information System (INIS)

    Yousefi, Shahriar; Weinreich, Ilona; Reinarz, Dominik

    2005-01-01

    This paper illustrates an application of wavelets as a possible vehicle for investigating the issue of market efficiency in futures markets for oil. The paper provides a short introduction to the wavelets and a few interesting wavelet-based contributions in economics and finance are briefly reviewed. A wavelet-based prediction procedure is introduced and market data on crude oil is used to provide forecasts over different forecasting horizons. The results are compared with data from futures markets for oil and the relative performance of this procedure is used to investigate whether futures markets are efficiently priced

  12. Content Adaptive Lagrange Multiplier Selection for Rate-Distortion Optimization in 3-D Wavelet-Based Scalable Video Coding

    Directory of Open Access Journals (Sweden)

    Ying Chen

    2018-03-01

    Full Text Available Rate-distortion optimization (RDO plays an essential role in substantially enhancing the coding efficiency. Currently, rate-distortion optimized mode decision is widely used in scalable video coding (SVC. Among all the possible coding modes, it aims to select the one which has the best trade-off between bitrate and compression distortion. Specifically, this tradeoff is tuned through the choice of the Lagrange multiplier. Despite the prevalence of conventional method for Lagrange multiplier selection in hybrid video coding, the underlying formulation is not applicable to 3-D wavelet-based SVC where the explicit values of the quantization step are not available, with on consideration of the content features of input signal. In this paper, an efficient content adaptive Lagrange multiplier selection algorithm is proposed in the context of RDO for 3-D wavelet-based SVC targeting quality scalability. Our contributions are two-fold. First, we introduce a novel weighting method, which takes account of the mutual information, gradient per pixel, and texture homogeneity to measure the temporal subband characteristics after applying the motion-compensated temporal filtering (MCTF technique. Second, based on the proposed subband weighting factor model, we derive the optimal Lagrange multiplier. Experimental results demonstrate that the proposed algorithm enables more satisfactory video quality with negligible additional computational complexity.

  13. A New Wavelet-Based ECG Delineator for the Evaluation of the Ventricular Innervation

    DEFF Research Database (Denmark)

    Cesari, Matteo; Mehlsen, Jesper; Mehlsen, Anne-Birgitte

    2017-01-01

    T-wave amplitude (TWA) has been proposed as a marker of the innervation of the myocardium. Until now, TWA has been calculated manually or with poor algorithms, thus making its use not efficient in a clinical environment. We introduce a new wavelet-based algorithm for the delineation QRS complexes...

  14. Parallel Algorithm for Wireless Data Compression and Encryption

    Directory of Open Access Journals (Sweden)

    Qin Jiancheng

    2017-01-01

    Full Text Available As the wireless network has limited bandwidth and insecure shared media, the data compression and encryption are very useful for the broadcasting transportation of big data in IoT (Internet of Things. However, the traditional techniques of compression and encryption are neither competent nor efficient. In order to solve this problem, this paper presents a combined parallel algorithm named “CZ algorithm” which can compress and encrypt the big data efficiently. CZ algorithm uses a parallel pipeline, mixes the coding of compression and encryption, and supports the data window up to 1 TB (or larger. Moreover, CZ algorithm can encrypt the big data as a chaotic cryptosystem which will not decrease the compression speed. Meanwhile, a shareware named “ComZip” is developed based on CZ algorithm. The experiment results show that ComZip in 64 b system can get better compression ratio than WinRAR and 7-zip, and it can be faster than 7-zip in the big data compression. In addition, ComZip encrypts the big data without extra consumption of computing resources.

  15. A new modified fast fractal image compression algorithm

    DEFF Research Database (Denmark)

    Salarian, Mehdi; Nadernejad, Ehsan; MiarNaimi, Hossein

    2013-01-01

    In this paper, a new fractal image compression algorithm is proposed, in which the time of the encoding process is considerably reduced. The algorithm exploits a domain pool reduction approach, along with the use of innovative predefined values for contrast scaling factor, S, instead of searching...

  16. Quasi Gradient Projection Algorithm for Sparse Reconstruction in Compressed Sensing

    Directory of Open Access Journals (Sweden)

    Xin Meng

    2014-02-01

    Full Text Available Compressed sensing is a novel signal sampling theory under the condition that the signal is sparse or compressible. The existing recovery algorithms based on the gradient projection can either need prior knowledge or recovery the signal poorly. In this paper, a new algorithm based on gradient projection is proposed, which is referred as Quasi Gradient Projection. The algorithm presented quasi gradient direction and two step sizes schemes along this direction. The algorithm doesn’t need any prior knowledge of the original signal. Simulation results demonstrate that the presented algorithm cans recovery the signal more correctly than GPSR which also don’t need prior knowledge. Meanwhile, the algorithm has a lower computation complexity.

  17. Analysing Music with Point-Set Compression Algorithms

    DEFF Research Database (Denmark)

    Meredith, David

    2016-01-01

    Several point-set pattern-discovery and compression algorithms designed for analysing music are reviewed and evaluated. Each algorithm takes as input a point-set representation of a score in which each note is represented as a point in pitch-time space. Each algorithm computes the maximal...... and sections in pieces of classical music. On the first task, the best-performing algorithms achieved success rates of around 84%. In the second task, the best algorithms achieved mean F1 scores of around 0.49, with scores for individual pieces rising as high as 0.71....

  18. MPEG-2 Compressed-Domain Algorithms for Video Analysis

    Directory of Open Access Journals (Sweden)

    Hesseler Wolfgang

    2006-01-01

    Full Text Available This paper presents new algorithms for extracting metadata from video sequences in the MPEG-2 compressed domain. Three algorithms for efficient low-level metadata extraction in preprocessing stages are described. The first algorithm detects camera motion using the motion vector field of an MPEG-2 video. The second method extends the idea of motion detection to a limited region of interest, yielding an efficient algorithm to track objects inside video sequences. The third algorithm performs a cut detection using macroblock types and motion vectors.

  19. Construction of a class of Daubechies type wavelet bases

    International Nuclear Information System (INIS)

    Li Dengfeng; Wu Guochang

    2009-01-01

    Extensive work has been done in the theory and the construction of compactly supported orthonormal wavelet bases of L 2 (R). Some of the most distinguished work was done by Daubechies, who constructed a whole family of such wavelet bases. In this paper, we construct a class of orthonormal wavelet bases by using the principle of Daubechies, and investigate the length of support and the regularity of these wavelet bases.

  20. A Compression Algorithm in Wireless Sensor Networks of Bearing Monitoring

    International Nuclear Information System (INIS)

    Zheng Bin; Meng Qingfeng; Wang Nan; Li Zhi

    2011-01-01

    The energy consumption of wireless sensor networks (WSNs) is always an important problem in the application of wireless sensor networks. This paper proposes a data compression algorithm to reduce amount of data and energy consumption during the data transmission process in the on-line WSNs-based bearing monitoring system. The proposed compression algorithm is based on lifting wavelets, Zerotree coding and Hoffman coding. Among of that, 5/3 lifting wavelets is used for dividing data into different frequency bands to extract signal characteristics. Zerotree coding is applied to calculate the dynamic thresholds to retain the attribute data. The attribute data are then encoded by Hoffman coding to further enhance the compression ratio. In order to validate the algorithm, simulation is carried out by using Matlab. The result of simulation shows that the proposed algorithm is very suitable for the compression of bearing monitoring data. The algorithm has been successfully used in online WSNs-based bearing monitoring system, in which TI DSP TMS320F2812 is used to realize the algorithm.

  1. Schwarz-based algorithms for compressible flows

    Energy Technology Data Exchange (ETDEWEB)

    Tidriri, M.D. [ICASE, Hampton, VA (United States)

    1996-12-31

    To compute steady compressible flows one often uses an implicit discretization approach which leads to a large sparse linear system that must be solved at each time step. In the derivation of this system one often uses a defect-correction procedure, in which the left-hand side of the system is discretized with a lower order approximation than that used for the right-hand side. This is due to storage considerations and computational complexity, and also to the fact that the resulting lower order matrix is better conditioned than the higher order matrix. The resulting schemes are only moderately implicit. In the case of structured, body-fitted grids, the linear system can easily be solved using approximate factorization (AF), which is among the most widely used methods for such grids. However, for unstructured grids, such techniques are no longer valid, and the system is solved using direct or iterative techniques. Because of the prohibitive computational costs and large memory requirements for the solution of compressible flows, iterative methods are preferred. In these defect-correction methods, which are implemented in most CFD computer codes, the mismatch in the right and left hand side operators, together with explicit treatment of the boundary conditions, lead to a severely limited CFL number, which results in a slow convergence to steady state aerodynamic solutions. Many authors have tried to replace explicit boundary conditions with implicit ones. Although they clearly demonstrate that high CFL numbers are possible, the reduction in CPU time is not clear cut.

  2. Using general-purpose compression algorithms for music analysis

    DEFF Research Database (Denmark)

    Louboutin, Corentin; Meredith, David

    2016-01-01

    General-purpose compression algorithms encode files as dictionaries of substrings with the positions of these strings’ occurrences. We hypothesized that such algorithms could be used for pattern discovery in music. We compared LZ77, LZ78, Burrows–Wheeler and COSIATEC on classifying folk song...... in the input data, COSIATEC outperformed LZ77 with a mean F1 score of 0.123, compared with 0.053 for LZ77. However, when the music was processed a voice at a time, the F1 score for LZ77 more than doubled to 0.124. We also discovered a significant correlation between compression factor and F1 score for all...

  3. SCALCE: boosting sequence compression algorithms using locally consistent encoding.

    Science.gov (United States)

    Hach, Faraz; Numanagic, Ibrahim; Alkan, Can; Sahinalp, S Cenk

    2012-12-01

    The high throughput sequencing (HTS) platforms generate unprecedented amounts of data that introduce challenges for the computational infrastructure. Data management, storage and analysis have become major logistical obstacles for those adopting the new platforms. The requirement for large investment for this purpose almost signalled the end of the Sequence Read Archive hosted at the National Center for Biotechnology Information (NCBI), which holds most of the sequence data generated world wide. Currently, most HTS data are compressed through general purpose algorithms such as gzip. These algorithms are not designed for compressing data generated by the HTS platforms; for example, they do not take advantage of the specific nature of genomic sequence data, that is, limited alphabet size and high similarity among reads. Fast and efficient compression algorithms designed specifically for HTS data should be able to address some of the issues in data management, storage and communication. Such algorithms would also help with analysis provided they offer additional capabilities such as random access to any read and indexing for efficient sequence similarity search. Here we present SCALCE, a 'boosting' scheme based on Locally Consistent Parsing technique, which reorganizes the reads in a way that results in a higher compression speed and compression rate, independent of the compression algorithm in use and without using a reference genome. Our tests indicate that SCALCE can improve the compression rate achieved through gzip by a factor of 4.19-when the goal is to compress the reads alone. In fact, on SCALCE reordered reads, gzip running time can improve by a factor of 15.06 on a standard PC with a single core and 6 GB memory. Interestingly even the running time of SCALCE + gzip improves that of gzip alone by a factor of 2.09. When compared with the recently published BEETL, which aims to sort the (inverted) reads in lexicographic order for improving bzip2, SCALCE + gzip

  4. A Wavelet-Based Approach to Fall Detection

    Directory of Open Access Journals (Sweden)

    Luca Palmerini

    2015-05-01

    Full Text Available Falls among older people are a widely documented public health problem. Automatic fall detection has recently gained huge importance because it could allow for the immediate communication of falls to medical assistance. The aim of this work is to present a novel wavelet-based approach to fall detection, focusing on the impact phase and using a dataset of real-world falls. Since recorded falls result in a non-stationary signal, a wavelet transform was chosen to examine fall patterns. The idea is to consider the average fall pattern as the “prototype fall”.In order to detect falls, every acceleration signal can be compared to this prototype through wavelet analysis. The similarity of the recorded signal with the prototype fall is a feature that can be used in order to determine the difference between falls and daily activities. The discriminative ability of this feature is evaluated on real-world data. It outperforms other features that are commonly used in fall detection studies, with an Area Under the Curve of 0.918. This result suggests that the proposed wavelet-based feature is promising and future studies could use this feature (in combination with others considering different fall phases in order to improve the performance of fall detection algorithms.

  5. A data compression algorithm for nuclear spectrum files

    International Nuclear Information System (INIS)

    Mika, J.F.; Martin, L.J.; Johnston, P.N.

    1990-01-01

    The total space occupied by computer files of spectra generated in nuclear spectroscopy systems can lead to problems of storage, and transmission time. An algorithm is presented which significantly reduces the space required to store nuclear spectra, without loss of any information content. Testing indicates that spectrum files can be routinely compressed by a factor of 5. (orig.)

  6. LFQC: a lossless compression algorithm for FASTQ files

    Science.gov (United States)

    Nicolae, Marius; Pathak, Sudipta; Rajasekaran, Sanguthevar

    2015-01-01

    Motivation: Next Generation Sequencing (NGS) technologies have revolutionized genomic research by reducing the cost of whole genome sequencing. One of the biggest challenges posed by modern sequencing technology is economic storage of NGS data. Storing raw data is infeasible because of its enormous size and high redundancy. In this article, we address the problem of storage and transmission of large FASTQ files using innovative compression techniques. Results: We introduce a new lossless non-reference based FASTQ compression algorithm named Lossless FASTQ Compressor. We have compared our algorithm with other state of the art big data compression algorithms namely gzip, bzip2, fastqz (Bonfield and Mahoney, 2013), fqzcomp (Bonfield and Mahoney, 2013), Quip (Jones et al., 2012), DSRC2 (Roguski and Deorowicz, 2014). This comparison reveals that our algorithm achieves better compression ratios on LS454 and SOLiD datasets. Availability and implementation: The implementations are freely available for non-commercial purposes. They can be downloaded from http://engr.uconn.edu/rajasek/lfqc-v1.1.zip. Contact: rajasek@engr.uconn.edu PMID:26093148

  7. On system behaviour using complex networks of a compression algorithm

    Science.gov (United States)

    Walker, David M.; Correa, Debora C.; Small, Michael

    2018-01-01

    We construct complex networks of scalar time series using a data compression algorithm. The structure and statistics of the resulting networks can be used to help characterize complex systems, and one property, in particular, appears to be a useful discriminating statistic in surrogate data hypothesis tests. We demonstrate these ideas on systems with known dynamical behaviour and also show that our approach is capable of identifying behavioural transitions within electroencephalogram recordings as well as changes due to a bifurcation parameter of a chaotic system. The technique we propose is dependent on a coarse grained quantization of the original time series and therefore provides potential for a spatial scale-dependent characterization of the data. Finally the method is as computationally efficient as the underlying compression algorithm and provides a compression of the salient features of long time series.

  8. Development of information preserving data compression algorithm for CT images

    International Nuclear Information System (INIS)

    Kobayashi, Yoshio

    1989-01-01

    Although digital imaging techniques in radiology develop rapidly, problems arise in archival storage and communication of image data. This paper reports on a new information preserving data compression algorithm for computed tomographic (CT) images. This algorithm consists of the following five processes: 1. Pixels surrounding the human body showing CT values smaller than -900 H.U. are eliminated. 2. Each pixel is encoded by its numerical difference from its neighboring pixel along a matrix line. 3. Difference values are encoded by a newly designed code rather than the natural binary code. 4. Image data, obtained with the above process, are decomposed into bit planes. 5. The bit state transitions in each bit plane are encoded by run length coding. Using this new algorithm, the compression ratios of brain, chest, and abdomen CT images are 4.49, 4.34. and 4.40 respectively. (author)

  9. Compression of fingerprint data using the wavelet vector quantization image compression algorithm. 1992 progress report

    Energy Technology Data Exchange (ETDEWEB)

    Bradley, J.N.; Brislawn, C.M.

    1992-04-11

    This report describes the development of a Wavelet Vector Quantization (WVQ) image compression algorithm for fingerprint raster files. The pertinent work was performed at Los Alamos National Laboratory for the Federal Bureau of Investigation. This document describes a previously-sent package of C-language source code, referred to as LAFPC, that performs the WVQ fingerprint compression and decompression tasks. The particulars of the WVQ algorithm and the associated design procedure are detailed elsewhere; the purpose of this document is to report the results of the design algorithm for the fingerprint application and to delineate the implementation issues that are incorporated in LAFPC. Special attention is paid to the computation of the wavelet transform, the fast search algorithm used for the VQ encoding, and the entropy coding procedure used in the transmission of the source symbols.

  10. The CCSDS Lossless Data Compression Algorithm for Space Applications

    Science.gov (United States)

    Yeh, Pen-Shu; Day, John H. (Technical Monitor)

    2001-01-01

    In the late 80's, when the author started working at the Goddard Space Flight Center (GSFC) for the National Aeronautics and Space Administration (NASA), several scientists there were in the process of formulating the next generation of Earth viewing science instruments, the Moderate Resolution Imaging Spectroradiometer (MODIS). The instrument would have over thirty spectral bands and would transmit enormous data through the communications channel. This was when the author was assigned the task of investigating lossless compression algorithms for space implementation to compress science data in order to reduce the requirement on bandwidth and storage.

  11. A review of lossless audio compression standards and algorithms

    Science.gov (United States)

    Muin, Fathiah Abdul; Gunawan, Teddy Surya; Kartiwi, Mira; Elsheikh, Elsheikh M. A.

    2017-09-01

    Over the years, lossless audio compression has gained popularity as researchers and businesses has become more aware of the need for better quality and higher storage demand. This paper will analyse various lossless audio coding algorithm and standards that are used and available in the market focusing on Linear Predictive Coding (LPC) specifically due to its popularity and robustness in audio compression, nevertheless other prediction methods are compared to verify this. Advanced representation of LPC such as LSP decomposition techniques are also discussed within this paper.

  12. Performance of target detection algorithm in compressive sensing miniature ultraspectral imaging compressed sensing system

    Science.gov (United States)

    Gedalin, Daniel; Oiknine, Yaniv; August, Isaac; Blumberg, Dan G.; Rotman, Stanley R.; Stern, Adrian

    2017-04-01

    Compressive sensing theory was proposed to deal with the high quantity of measurements demanded by traditional hyperspectral systems. Recently, a compressive spectral imaging technique dubbed compressive sensing miniature ultraspectral imaging (CS-MUSI) was presented. This system uses a voltage controlled liquid crystal device to create multiplexed hyperspectral cubes. We evaluate the utility of the data captured using the CS-MUSI system for the task of target detection. Specifically, we compare the performance of the matched filter target detection algorithm in traditional hyperspectral systems and in CS-MUSI multiplexed hyperspectral cubes. We found that the target detection algorithm performs similarly in both cases, despite the fact that the CS-MUSI data is up to an order of magnitude less than that in conventional hyperspectral cubes. Moreover, the target detection is approximately an order of magnitude faster in CS-MUSI data.

  13. Wavelet-Based Signal Processing of Electromagnetic Pulse Generated Waveforms

    National Research Council Canada - National Science Library

    Ardolino, Richard S

    2007-01-01

    This thesis investigated and compared alternative signal processing techniques that used wavelet-based methods instead of traditional frequency domain methods for processing measured electromagnetic pulse (EMP) waveforms...

  14. A novel high-frequency encoding algorithm for image compression

    Science.gov (United States)

    Siddeq, Mohammed M.; Rodrigues, Marcos A.

    2017-12-01

    In this paper, a new method for image compression is proposed whose quality is demonstrated through accurate 3D reconstruction from 2D images. The method is based on the discrete cosine transform (DCT) together with a high-frequency minimization encoding algorithm at compression stage and a new concurrent binary search algorithm at decompression stage. The proposed compression method consists of five main steps: (1) divide the image into blocks and apply DCT to each block; (2) apply a high-frequency minimization method to the AC-coefficients reducing each block by 2/3 resulting in a minimized array; (3) build a look up table of probability data to enable the recovery of the original high frequencies at decompression stage; (4) apply a delta or differential operator to the list of DC-components; and (5) apply arithmetic encoding to the outputs of steps (2) and (4). At decompression stage, the look up table and the concurrent binary search algorithm are used to reconstruct all high-frequency AC-coefficients while the DC-components are decoded by reversing the arithmetic coding. Finally, the inverse DCT recovers the original image. We tested the technique by compressing and decompressing 2D images including images with structured light patterns for 3D reconstruction. The technique is compared with JPEG and JPEG2000 through 2D and 3D RMSE. Results demonstrate that the proposed compression method is perceptually superior to JPEG with equivalent quality to JPEG2000. Concerning 3D surface reconstruction from images, it is demonstrated that the proposed method is superior to both JPEG and JPEG2000.

  15. Wavelet based Image Registration Technique for Matching Dental x-rays

    OpenAIRE

    P. Ramprasad; H. C. Nagaraj; M. K. Parasuram

    2008-01-01

    Image registration plays an important role in the diagnosis of dental pathologies such as dental caries, alveolar bone loss and periapical lesions etc. This paper presents a new wavelet based algorithm for registering noisy and poor contrast dental x-rays. Proposed algorithm has two stages. First stage is a preprocessing stage, removes the noise from the x-ray images. Gaussian filter has been used. Second stage is a geometric transformation stage. Proposed work uses two l...

  16. A Novel Error Resilient Scheme for Wavelet-based Image Coding Over Packet Networks

    OpenAIRE

    WenZhu Sun; HongYu Wang; DaXing Qian

    2012-01-01

    this paper presents a robust transmission strategy for wavelet based scalable bit stream over packet erasure channel. By taking the advantage of the bit plane coding and the multiple description coding, the proposed strategy adopts layered multiple description coding (LMDC) for the embedded wavelet coders to improve the error resistant capability of the important bit planes in the meaning of D(R) function. Then, the post-compression rate-distortion (PCRD) optimization process is used to impro...

  17. BIND – An algorithm for loss-less compression of nucleotide ...

    Indian Academy of Sciences (India)

    constituting the FNA data set. Supplementary table 2. Original and compressed file sizes (obtained using various compression algorithms) for 2679 files constituting the FFN data set. Supplementary table 3. Original and compressed file sizes (obtained using various compression algorithms) for 25 files constituting the ...

  18. 32Still Image Compression Algorithm Based on Directional Filter Banks

    OpenAIRE

    Chunling Yang; Duanwu Cao; Li Ma

    2010-01-01

    Hybrid wavelet and directional filter banks (HWD) is an effective multi-scale geometrical analysis method. Compared to wavelet transform, it can better capture the directional information of images. But the ringing artifact, which is caused by the coefficient quantization in transform domain, is the biggest drawback of image compression algorithms in HWD domain. In this paper, by researching on the relationship between directional decomposition and ringing artifact, an improved decomposition ...

  19. Towards the compression of parton densities through machine learning algorithms

    CERN Document Server

    Carrazza, Stefano

    2016-01-01

    One of the most fascinating challenges in the context of parton density function (PDF) is the determination of the best combined PDF uncertainty from individual PDF sets. Since 2014 multiple methodologies have been developed to achieve this goal. In this proceedings we first summarize the strategy adopted by the PDF4LHC15 recommendation and then, we discuss about a new approach to Monte Carlo PDF compression based on clustering through machine learning algorithms.

  20. Low-Complexity Compression Algorithm for Hyperspectral Images Based on Distributed Source Coding

    Directory of Open Access Journals (Sweden)

    Yongjian Nian

    2013-01-01

    Full Text Available A low-complexity compression algorithm for hyperspectral images based on distributed source coding (DSC is proposed in this paper. The proposed distributed compression algorithm can realize both lossless and lossy compression, which is implemented by performing scalar quantization strategy on the original hyperspectral images followed by distributed lossless compression. Multilinear regression model is introduced for distributed lossless compression in order to improve the quality of side information. Optimal quantized step is determined according to the restriction of the correct DSC decoding, which makes the proposed algorithm achieve near lossless compression. Moreover, an effective rate distortion algorithm is introduced for the proposed algorithm to achieve low bit rate. Experimental results show that the compression performance of the proposed algorithm is competitive with that of the state-of-the-art compression algorithms for hyperspectral images.

  1. Spatial compression algorithm for the analysis of very large multivariate images

    Science.gov (United States)

    Keenan, Michael R [Albuquerque, NM

    2008-07-15

    A method for spatially compressing data sets enables the efficient analysis of very large multivariate images. The spatial compression algorithms use a wavelet transformation to map an image into a compressed image containing a smaller number of pixels that retain the original image's information content. Image analysis can then be performed on a compressed data matrix consisting of a reduced number of significant wavelet coefficients. Furthermore, a block algorithm can be used for performing common operations more efficiently. The spatial compression algorithms can be combined with spectral compression algorithms to provide further computational efficiencies.

  2. A Robust Parallel Algorithm for Combinatorial Compressed Sensing

    Science.gov (United States)

    Mendoza-Smith, Rodrigo; Tanner, Jared W.; Wechsung, Florian

    2018-04-01

    In previous work two of the authors have shown that a vector $x \\in \\mathbb{R}^n$ with at most $k Parallel-$\\ell_0$ decoding algorithm, where $\\mathrm{nnz}(A)$ denotes the number of nonzero entries in $A \\in \\mathbb{R}^{m \\times n}$. In this paper we present the Robust-$\\ell_0$ decoding algorithm, which robustifies Parallel-$\\ell_0$ when the sketch $Ax$ is corrupted by additive noise. This robustness is achieved by approximating the asymptotic posterior distribution of values in the sketch given its corrupted measurements. We provide analytic expressions that approximate these posteriors under the assumptions that the nonzero entries in the signal and the noise are drawn from continuous distributions. Numerical experiments presented show that Robust-$\\ell_0$ is superior to existing greedy and combinatorial compressed sensing algorithms in the presence of small to moderate signal-to-noise ratios in the setting of Gaussian signals and Gaussian additive noise.

  3. Compressively sampled MR image reconstruction using generalized thresholding iterative algorithm

    Science.gov (United States)

    Elahi, Sana; kaleem, Muhammad; Omer, Hammad

    2018-01-01

    Compressed sensing (CS) is an emerging area of interest in Magnetic Resonance Imaging (MRI). CS is used for the reconstruction of the images from a very limited number of samples in k-space. This significantly reduces the MRI data acquisition time. One important requirement for signal recovery in CS is the use of an appropriate non-linear reconstruction algorithm. It is a challenging task to choose a reconstruction algorithm that would accurately reconstruct the MR images from the under-sampled k-space data. Various algorithms have been used to solve the system of non-linear equations for better image quality and reconstruction speed in CS. In the recent past, iterative soft thresholding algorithm (ISTA) has been introduced in CS-MRI. This algorithm directly cancels the incoherent artifacts produced because of the undersampling in k -space. This paper introduces an improved iterative algorithm based on p -thresholding technique for CS-MRI image reconstruction. The use of p -thresholding function promotes sparsity in the image which is a key factor for CS based image reconstruction. The p -thresholding based iterative algorithm is a modification of ISTA, and minimizes non-convex functions. It has been shown that the proposed p -thresholding iterative algorithm can be used effectively to recover fully sampled image from the under-sampled data in MRI. The performance of the proposed method is verified using simulated and actual MRI data taken at St. Mary's Hospital, London. The quality of the reconstructed images is measured in terms of peak signal-to-noise ratio (PSNR), artifact power (AP), and structural similarity index measure (SSIM). The proposed approach shows improved performance when compared to other iterative algorithms based on log thresholding, soft thresholding and hard thresholding techniques at different reduction factors.

  4. A Multiresolution Image Completion Algorithm for Compressing Digital Color Images

    Directory of Open Access Journals (Sweden)

    R. Gomathi

    2014-01-01

    Full Text Available This paper introduces a new framework for image coding that uses image inpainting method. In the proposed algorithm, the input image is subjected to image analysis to remove some of the portions purposefully. At the same time, edges are extracted from the input image and they are passed to the decoder in the compressed manner. The edges which are transmitted to decoder act as assistant information and they help inpainting process fill the missing regions at the decoder. Textural synthesis and a new shearlet inpainting scheme based on the theory of p-Laplacian operator are proposed for image restoration at the decoder. Shearlets have been mathematically proven to represent distributed discontinuities such as edges better than traditional wavelets and are a suitable tool for edge characterization. This novel shearlet p-Laplacian inpainting model can effectively reduce the staircase effect in Total Variation (TV inpainting model whereas it can still keep edges as well as TV model. In the proposed scheme, neural network is employed to enhance the value of compression ratio for image coding. Test results are compared with JPEG 2000 and H.264 Intracoding algorithms. The results show that the proposed algorithm works well.

  5. Spatial correlation genetic algorithm for fractal image compression

    International Nuclear Information System (INIS)

    Wu, M.-S.; Teng, W.-C.; Jeng, J.-H.; Hsieh, J.-G.

    2006-01-01

    Fractal image compression explores the self-similarity property of a natural image and utilizes the partitioned iterated function system (PIFS) to encode it. This technique is of great interest both in theory and application. However, it is time-consuming in the encoding process and such drawback renders it impractical for real time applications. The time is mainly spent on the search for the best-match block in a large domain pool. In this paper, a spatial correlation genetic algorithm (SC-GA) is proposed to speed up the encoder. There are two stages for the SC-GA method. The first stage makes use of spatial correlations in images for both the domain pool and the range pool to exploit local optima. The second stage is operated on the whole image to explore more adequate similarities if the local optima are not satisfied. With the aid of spatial correlation in images, the encoding time is 1.5 times faster than that of traditional genetic algorithm method, while the quality of the retrieved image is almost the same. Moreover, about half of the matched blocks come from the correlated space, so fewer bits are required to represent the fractal transform and therefore the compression ratio is also improved

  6. Wavelet compression of multichannel ECG data by enhanced set partitioning in hierarchical trees algorithm.

    Science.gov (United States)

    Sharifahmadian, Ershad

    2006-01-01

    The set partitioning in hierarchical trees (SPIHT) algorithm is very effective and computationally simple technique for image and signal compression. Here the author modified the algorithm which provides even better performance than the SPIHT algorithm. The enhanced set partitioning in hierarchical trees (ESPIHT) algorithm has performance faster than the SPIHT algorithm. In addition, the proposed algorithm reduces the number of bits in a bit stream which is stored or transmitted. I applied it to compression of multichannel ECG data. Also, I presented a specific procedure based on the modified algorithm for more efficient compression of multichannel ECG data. This method employed on selected records from the MIT-BIH arrhythmia database. According to experiments, the proposed method attained the significant results regarding compression of multichannel ECG data. Furthermore, in order to compress one signal which is stored for a long time, the proposed multichannel compression method can be utilized efficiently.

  7. FPGA Accelerator for Wavelet-Based Automated Global Image Registration

    Directory of Open Access Journals (Sweden)

    Baofeng Li

    2009-01-01

    Full Text Available Wavelet-based automated global image registration (WAGIR is fundamental for most remote sensing image processing algorithms and extremely computation-intensive. With more and more algorithms migrating from ground computing to onboard computing, an efficient dedicated architecture of WAGIR is desired. In this paper, a BWAGIR architecture is proposed based on a block resampling scheme. BWAGIR achieves a significant performance by pipelining computational logics, parallelizing the resampling process and the calculation of correlation coefficient and parallel memory access. A proof-of-concept implementation with 1 BWAGIR processing unit of the architecture performs at least 7.4X faster than the CL cluster system with 1 node, and at least 3.4X than the MPM massively parallel machine with 1 node. Further speedup can be achieved by parallelizing multiple BWAGIR units. The architecture with 5 units achieves a speedup of about 3X against the CL with 16 nodes and a comparative speed with the MPM with 30 nodes. More importantly, the BWAGIR architecture can be deployed onboard economically.

  8. FPGA Accelerator for Wavelet-Based Automated Global Image Registration

    Directory of Open Access Journals (Sweden)

    Li Baofeng

    2009-01-01

    Full Text Available Abstract Wavelet-based automated global image registration (WAGIR is fundamental for most remote sensing image processing algorithms and extremely computation-intensive. With more and more algorithms migrating from ground computing to onboard computing, an efficient dedicated architecture of WAGIR is desired. In this paper, a BWAGIR architecture is proposed based on a block resampling scheme. BWAGIR achieves a significant performance by pipelining computational logics, parallelizing the resampling process and the calculation of correlation coefficient and parallel memory access. A proof-of-concept implementation with 1 BWAGIR processing unit of the architecture performs at least 7.4X faster than the CL cluster system with 1 node, and at least 3.4X than the MPM massively parallel machine with 1 node. Further speedup can be achieved by parallelizing multiple BWAGIR units. The architecture with 5 units achieves a speedup of about 3X against the CL with 16 nodes and a comparative speed with the MPM with 30 nodes. More importantly, the BWAGIR architecture can be deployed onboard economically.

  9. Wavelet-based ground vehicle recognition using acoustic signals

    Science.gov (United States)

    Choe, Howard C.; Karlsen, Robert E.; Gerhart, Grant R.; Meitzler, Thomas J.

    1996-03-01

    We present, in this paper, a wavelet-based acoustic signal analysis to remotely recognize military vehicles using their sound intercepted by acoustic sensors. Since expedited signal recognition is imperative in many military and industrial situations, we developed an algorithm that provides an automated, fast signal recognition once implemented in a real-time hardware system. This algorithm consists of wavelet preprocessing, feature extraction and compact signal representation, and a simple but effective statistical pattern matching. The current status of the algorithm does not require any training. The training is replaced by human selection of reference signals (e.g., squeak or engine exhaust sound) distinctive to each individual vehicle based on human perception. This allows a fast archiving of any new vehicle type in the database once the signal is collected. The wavelet preprocessing provides time-frequency multiresolution analysis using discrete wavelet transform (DWT). Within each resolution level, feature vectors are generated from statistical parameters and energy content of the wavelet coefficients. After applying our algorithm on the intercepted acoustic signals, the resultant feature vectors are compared with the reference vehicle feature vectors in the database using statistical pattern matching to determine the type of vehicle from where the signal originated. Certainly, statistical pattern matching can be replaced by an artificial neural network (ANN); however, the ANN would require training data sets and time to train the net. Unfortunately, this is not always possible for many real world situations, especially collecting data sets from unfriendly ground vehicles to train the ANN. Our methodology using wavelet preprocessing and statistical pattern matching provides robust acoustic signal recognition. We also present an example of vehicle recognition using acoustic signals collected from two different military ground vehicles. In this paper, we will

  10. An image adaptive, wavelet-based watermarking of digital images

    Science.gov (United States)

    Agreste, Santa; Andaloro, Guido; Prestipino, Daniela; Puccio, Luigia

    2007-12-01

    In digital management, multimedia content and data can easily be used in an illegal way--being copied, modified and distributed again. Copyright protection, intellectual and material rights protection for authors, owners, buyers, distributors and the authenticity of content are crucial factors in solving an urgent and real problem. In such scenario digital watermark techniques are emerging as a valid solution. In this paper, we describe an algorithm--called WM2.0--for an invisible watermark: private, strong, wavelet-based and developed for digital images protection and authenticity. Using discrete wavelet transform (DWT) is motivated by good time-frequency features and well-matching with human visual system directives. These two combined elements are important in building an invisible and robust watermark. WM2.0 works on a dual scheme: watermark embedding and watermark detection. The watermark is embedded into high frequency DWT components of a specific sub-image and it is calculated in correlation with the image features and statistic properties. Watermark detection applies a re-synchronization between the original and watermarked image. The correlation between the watermarked DWT coefficients and the watermark signal is calculated according to the Neyman-Pearson statistic criterion. Experimentation on a large set of different images has shown to be resistant against geometric, filtering and StirMark attacks with a low rate of false alarm.

  11. The MUSIC algorithm for sparse objects: a compressed sensing analysis

    International Nuclear Information System (INIS)

    Fannjiang, Albert C

    2011-01-01

    The multiple signal classification (MUSIC) algorithm, and its extension for imaging sparse extended objects, with noisy data is analyzed by compressed sensing (CS) techniques. A thresholding rule is developed to augment the standard MUSIC algorithm. The notion of restricted isometry property (RIP) and an upper bound on the restricted isometry constant (RIC) are employed to establish sufficient conditions for the exact localization by MUSIC with or without noise. In the noiseless case, the sufficient condition gives an upper bound on the numbers of random sampling and incident directions necessary for exact localization. In the noisy case, the sufficient condition assumes additionally an upper bound for the noise-to-object ratio in terms of the RIC and the dynamic range of objects. This bound points to the super-resolution capability of the MUSIC algorithm. Rigorous comparison of performance between MUSIC and the CS minimization principle, basis pursuit denoising (BPDN), is given. In general, the MUSIC algorithm guarantees to recover, with high probability, s scatterers with n=O(s 2 ) random sampling and incident directions and sufficiently high frequency. For the favorable imaging geometry where the scatterers are distributed on a transverse plane MUSIC guarantees to recover, with high probability, s scatterers with a median frequency and n=O(s) random sampling/incident directions. Moreover, for the problems of spectral estimation and source localizations both BPDN and MUSIC guarantee, with high probability, to identify exactly the frequencies of random signals with the number n=O(s) of sampling times. However, in the absence of abundant realizations of signals, BPDN is the preferred method for spectral estimation. Indeed, BPDN can identify the frequencies approximately with just one realization of signals with the recovery error at worst linearly proportional to the noise level. Numerical results confirm that BPDN outperforms MUSIC in the well-resolved case while

  12. Embedded wavelet-based face recognition under variable position

    Science.gov (United States)

    Cotret, Pascal; Chevobbe, Stéphane; Darouich, Mehdi

    2015-02-01

    For several years, face recognition has been a hot topic in the image processing field: this technique is applied in several domains such as CCTV, electronic devices delocking and so on. In this context, this work studies the efficiency of a wavelet-based face recognition method in terms of subject position robustness and performance on various systems. The use of wavelet transform has a limited impact on the position robustness of PCA-based face recognition. This work shows, for a well-known database (Yale face database B*), that subject position in a 3D space can vary up to 10% of the original ROI size without decreasing recognition rates. Face recognition is performed on approximation coefficients of the image wavelet transform: results are still satisfying after 3 levels of decomposition. Furthermore, face database size can be divided by a factor 64 (22K with K = 3). In the context of ultra-embedded vision systems, memory footprint is one of the key points to be addressed; that is the reason why compression techniques such as wavelet transform are interesting. Furthermore, it leads to a low-complexity face detection stage compliant with limited computation resources available on such systems. The approach described in this work is tested on three platforms from a standard x86-based computer towards nanocomputers such as RaspberryPi and SECO boards. For K = 3 and a database with 40 faces, the execution mean time for one frame is 0.64 ms on a x86-based computer, 9 ms on a SECO board and 26 ms on a RaspberryPi (B model).

  13. Image-Data Compression Using Edge-Optimizing Algorithm for WFA Inference.

    Science.gov (United States)

    Culik, Karel II; Kari, Jarkko

    1994-01-01

    Presents an inference algorithm that produces a weighted finite automata (WFA), in particular, the grayness functions of graytone images. Image-data compression results based on the new inference algorithm produces a WFA with a relatively small number of edges. Image-data compression results alone and in combination with wavelets are discussed.…

  14. A Novel Range Compression Algorithm for Resolution Enhancement in GNSS-SARs

    Directory of Open Access Journals (Sweden)

    Yu Zheng

    2017-06-01

    Full Text Available In this paper, a novel range compression algorithm for enhancing range resolutions of a passive Global Navigation Satellite System-based Synthetic Aperture Radar (GNSS-SAR is proposed. In the proposed algorithm, within each azimuth bin, firstly range compression is carried out by correlating a reflected GNSS intermediate frequency (IF signal with a synchronized direct GNSS base-band signal in the range domain. Thereafter, spectrum equalization is applied to the compressed results for suppressing side lobes to obtain a final range-compressed signal. Both theoretical analysis and simulation results have demonstrated that significant range resolution improvement in GNSS-SAR images can be achieved by the proposed range compression algorithm, compared to the conventional range compression algorithm.

  15. A Near-Lossless Image Compression Algorithm Suitable for Hardware Design in Wireless Endoscopy System

    Directory of Open Access Journals (Sweden)

    Xie Xiang

    2007-01-01

    Full Text Available In order to decrease the communication bandwidth and save the transmitting power in the wireless endoscopy capsule, this paper presents a new near-lossless image compression algorithm based on the Bayer format image suitable for hardware design. This algorithm can provide low average compression rate ( bits/pixel with high image quality (larger than dB for endoscopic images. Especially, it has low complexity hardware overhead (only two line buffers and supports real-time compressing. In addition, the algorithm can provide lossless compression for the region of interest (ROI and high-quality compression for other regions. The ROI can be selected arbitrarily by varying ROI parameters. In addition, the VLSI architecture of this compression algorithm is also given out. Its hardware design has been implemented in m CMOS process.

  16. A real-time ECG data compression and transmission algorithm for an e-health device.

    Science.gov (United States)

    Lee, SangJoon; Kim, Jungkuk; Lee, Myoungho

    2011-09-01

    This paper introduces a real-time data compression and transmission algorithm between e-health terminals for a periodic ECGsignal. The proposed algorithm consists of five compression procedures and four reconstruction procedures. In order to evaluate the performance of the proposed algorithm, the algorithm was applied to all 48 recordings of MIT-BIH arrhythmia database, and the compress ratio (CR), percent root mean square difference (PRD), percent root mean square difference normalized (PRDN), rms, SNR, and quality score (QS) values were obtained. The result showed that the CR was 27.9:1 and the PRD was 2.93 on average for all 48 data instances with a 15% window size. In addition, the performance of the algorithm was compared to those of similar algorithms introduced recently by others. It was found that the proposed algorithm showed clearly superior performance in all 48 data instances at a compression ratio lower than 15:1, whereas it showed similar or slightly inferior PRD performance for a data compression ratio higher than 20:1. In light of the fact that the similarity with the original data becomes meaningless when the PRD is higher than 2, the proposed algorithm shows significantly better performance compared to the performance levels of other algorithms. Moreover, because the algorithm can compress and transmit data in real time, it can be served as an optimal biosignal data transmission method for limited bandwidth communication between e-health devices.

  17. Task-oriented lossy compression of magnetic resonance images

    Science.gov (United States)

    Anderson, Mark C.; Atkins, M. Stella; Vaisey, Jacques

    1996-04-01

    A new task-oriented image quality metric is used to quantify the effects of distortion introduced into magnetic resonance images by lossy compression. This metric measures the similarity between a radiologist's manual segmentation of pathological features in the original images and the automated segmentations performed on the original and compressed images. The images are compressed using a general wavelet-based lossy image compression technique, embedded zerotree coding, and segmented using a three-dimensional stochastic model-based tissue segmentation algorithm. The performance of the compression system is then enhanced by compressing different regions of the image volume at different bit rates, guided by prior knowledge about the location of important anatomical regions in the image. Application of the new system to magnetic resonance images is shown to produce compression results superior to the conventional methods, both subjectively and with respect to the segmentation similarity metric.

  18. Verification-Based Interval-Passing Algorithm for Compressed Sensing

    OpenAIRE

    Wu, Xiaofu; Yang, Zhen

    2013-01-01

    We propose a verification-based Interval-Passing (IP) algorithm for iteratively reconstruction of nonnegative sparse signals using parity check matrices of low-density parity check (LDPC) codes as measurement matrices. The proposed algorithm can be considered as an improved IP algorithm by further incorporation of the mechanism of verification algorithm. It is proved that the proposed algorithm performs always better than either the IP algorithm or the verification algorithm. Simulation resul...

  19. Research on compressive sensing reconstruction algorithm based on total variation model

    Science.gov (United States)

    Gao, Yu-xuan; Sun, Huayan; Zhang, Tinghua; Du, Lin

    2017-12-01

    Compressed sensing for breakthrough Nyquist sampling theorem provides a strong theoretical , making compressive sampling for image signals be carried out simultaneously. In traditional imaging procedures using compressed sensing theory, not only can it reduces the storage space, but also can reduce the demand for detector resolution greatly. Using the sparsity of image signal, by solving the mathematical model of inverse reconfiguration, realize the super-resolution imaging. Reconstruction algorithm is the most critical part of compression perception, to a large extent determine the accuracy of the reconstruction of the image.The reconstruction algorithm based on the total variation (TV) model is more suitable for the compression reconstruction of the two-dimensional image, and the better edge information can be obtained. In order to verify the performance of the algorithm, Simulation Analysis the reconstruction result in different coding mode of the reconstruction algorithm based on the TV reconstruction algorithm. The reconstruction effect of the reconfigurable algorithm based on TV based on the different coding methods is analyzed to verify the stability of the algorithm. This paper compares and analyzes the typical reconstruction algorithm in the same coding mode. On the basis of the minimum total variation algorithm, the Augmented Lagrangian function term is added and the optimal value is solved by the alternating direction method.Experimental results show that the reconstruction algorithm is compared with the traditional classical algorithm based on TV has great advantages, under the low measurement rate can be quickly and accurately recovers target image.

  20. A joint image encryption and watermarking algorithm based on compressive sensing and chaotic map

    International Nuclear Information System (INIS)

    Xiao Di; Cai Hong-Kun; Zheng Hong-Ying

    2015-01-01

    In this paper, a compressive sensing (CS) and chaotic map-based joint image encryption and watermarking algorithm is proposed. The transform domain coefficients of the original image are scrambled by Arnold map firstly. Then the watermark is adhered to the scrambled data. By compressive sensing, a set of watermarked measurements is obtained as the watermarked cipher image. In this algorithm, watermark embedding and data compression can be performed without knowing the original image; similarly, watermark extraction will not interfere with decryption. Due to the characteristics of CS, this algorithm features compressible cipher image size, flexible watermark capacity, and lossless watermark extraction from the compressed cipher image as well as robustness against packet loss. Simulation results and analyses show that the algorithm achieves good performance in the sense of security, watermark capacity, extraction accuracy, reconstruction, robustness, etc. (paper)

  1. The compression algorithm for the data acquisition system in HT-7 tokamak

    International Nuclear Information System (INIS)

    Zhu Lin; Luo Jiarong; Li Guiming; Yue Dongli

    2003-01-01

    HT-7 superconducting tokamak in the Institute of Plasma Physics of the Chinese Academy of Sciences is an experimental device for fusion research in China. The main task of the data acquisition system of HT-7 is to acquire, store, analyze and index the data. The volume of the data is nearly up to hundreds of million bytes. Besides the hardware and software support, a great capacity of data storage, process and transfer is a more important problem. To deal with this problem, the key technology is data compression algorithm. In the paper, the data format in HT-7 is introduced first, then the data compression algorithm, LZO, being a kind of portable lossless data compression algorithm with ANSIC, is analyzed. This compression algorithm, which fits well with the data acquisition and distribution in the nuclear fusion experiment, offers a pretty fast compression and extremely fast decompression. At last the performance evaluation of LZO application in HT-7 is given

  2. 3D Wavelet-Based Filter and Method

    Science.gov (United States)

    Moss, William C.; Haase, Sebastian; Sedat, John W.

    2008-08-12

    A 3D wavelet-based filter for visualizing and locating structural features of a user-specified linear size in 2D or 3D image data. The only input parameter is a characteristic linear size of the feature of interest, and the filter output contains only those regions that are correlated with the characteristic size, thus denoising the image.

  3. Empirical and Statistical Evaluation of the Effectiveness of Four Lossless Data Compression Algorithms

    Directory of Open Access Journals (Sweden)

    N. A. Azeez

    2017-04-01

    Full Text Available Data compression is the process of reducing the size of a file to effectively reduce storage space and communication cost. The evolvement in technology and digital age has led to an unparalleled usage of digital files in this current decade. The usage of data has resulted to an increase in the amount of data being transmitted via various channels of data communication which has prompted the need to look into the current lossless data compression algorithms to check for their level of effectiveness so as to maximally reduce the bandwidth requirement in communication and transfer of data. Four lossless data compression algorithm: Lempel-Ziv Welch algorithm, Shannon-Fano algorithm, Adaptive Huffman algorithm and Run-Length encoding have been selected for implementation. The choice of these algorithms was based on their similarities, particularly in application areas. Their level of efficiency and effectiveness were evaluated using some set of predefined performance evaluation metrics namely compression ratio, compression factor, compression time, saving percentage, entropy and code efficiency. The algorithms implementation was done in the NetBeans Integrated Development Environment using Java as the programming language. Through the statistical analysis performed using Boxplot and ANOVA and comparison made on the four algo

  4. Fast wavelet based sparse approximate inverse preconditioner

    Energy Technology Data Exchange (ETDEWEB)

    Wan, W.L. [Univ. of California, Los Angeles, CA (United States)

    1996-12-31

    Incomplete LU factorization is a robust preconditioner for both general and PDE problems but unfortunately not easy to parallelize. Recent study of Huckle and Grote and Chow and Saad showed that sparse approximate inverse could be a potential alternative while readily parallelizable. However, for special class of matrix A that comes from elliptic PDE problems, their preconditioners are not optimal in the sense that independent of mesh size. A reason may be that no good sparse approximate inverse exists for the dense inverse matrix. Our observation is that for this kind of matrices, its inverse entries typically have piecewise smooth changes. We can take advantage of this fact and use wavelet compression techniques to construct a better sparse approximate inverse preconditioner. We shall show numerically that our approach is effective for this kind of matrices.

  5. An efficient algorithm for MR image reconstruction and compression

    International Nuclear Information System (INIS)

    Wang, Hang; Rosenfeld, D.; Braun, M.; Yan, Hong

    1992-01-01

    In magnetic resonance imaging (MRI), the original data are sampled in the spatial frequency domain. The sampled data thus constitute a set of discrete Fourier transform (DFT) coefficients. The image is usually reconstructed by taking inverse DFT. The image data may then be efficiently compressed using the discrete cosine transform (DCT). A method of using DCT to treat the sampled data is presented which combines two procedures, image reconstruction and data compression. This method may be particularly useful in medical picture archiving and communication systems where both image reconstruction and compression are important issues. 11 refs., 3 figs

  6. Image compression-encryption algorithms by combining hyper-chaotic system with discrete fractional random transform

    Science.gov (United States)

    Gong, Lihua; Deng, Chengzhi; Pan, Shumin; Zhou, Nanrun

    2018-07-01

    Based on hyper-chaotic system and discrete fractional random transform, an image compression-encryption algorithm is designed. The original image is first transformed into a spectrum by the discrete cosine transform and the resulting spectrum is compressed according to the method of spectrum cutting. The random matrix of the discrete fractional random transform is controlled by a chaotic sequence originated from the high dimensional hyper-chaotic system. Then the compressed spectrum is encrypted by the discrete fractional random transform. The order of DFrRT and the parameters of the hyper-chaotic system are the main keys of this image compression and encryption algorithm. The proposed algorithm can compress and encrypt image signal, especially can encrypt multiple images once. To achieve the compression of multiple images, the images are transformed into spectra by the discrete cosine transform, and then the spectra are incised and spliced into a composite spectrum by Zigzag scanning. Simulation results demonstrate that the proposed image compression and encryption algorithm is of high security and good compression performance.

  7. A Coded Aperture Compressive Imaging Array and Its Visual Detection and Tracking Algorithms for Surveillance Systems

    Directory of Open Access Journals (Sweden)

    Hanxiao Wu

    2012-10-01

    Full Text Available In this paper, we propose an application of a compressive imaging system to the problem of wide-area video surveillance systems. A parallel coded aperture compressive imaging system is proposed to reduce the needed high resolution coded mask requirements and facilitate the storage of the projection matrix. Random Gaussian, Toeplitz and binary phase coded masks are utilized to obtain the compressive sensing images. The corresponding motion targets detection and tracking algorithms directly using the compressive sampling images are developed. A mixture of Gaussian distribution is applied in the compressive image space to model the background image and for foreground detection. For each motion target in the compressive sampling domain, a compressive feature dictionary spanned by target templates and noises templates is sparsely represented. An l1 optimization algorithm is used to solve the sparse coefficient of templates. Experimental results demonstrate that low dimensional compressed imaging representation is sufficient to determine spatial motion targets. Compared with the random Gaussian and Toeplitz phase mask, motion detection algorithms using a random binary phase mask can yield better detection results. However using random Gaussian and Toeplitz phase mask can achieve high resolution reconstructed image. Our tracking algorithm can achieve a real time speed that is up to 10 times faster than that of the l1 tracker without any optimization.

  8. Wavelet compression algorithm applied to abdominal ultrasound images

    International Nuclear Information System (INIS)

    Lin, Cheng-Hsun; Pan, Su-Feng; LU, Chin-Yuan; Lee, Ming-Che

    2006-01-01

    We sought to investigate acceptable compression ratios of lossy wavelet compression on 640 x 480 x 8 abdominal ultrasound (US) images. We acquired 100 abdominal US images with normal and abnormal findings from the view station of a 932-bed teaching hospital. The US images were then compressed at quality factors (QFs) of 3, 10, 30, and 50 followed outcomes of a pilot study. This was equal to the average compression ratios of 4.3:1, 8.5:1, 20:1 and 36.6:1, respectively. Four objective measurements were carried out to examine and compare the image degradation between original and compressed images. Receiver operating characteristic (ROC) analysis was also introduced for subjective assessment. Five experienced and qualified radiologists as reviewers blinded to corresponding pathological findings, analysed paired 400 randomly ordered images with two 17-inch thin film transistor/liquid crystal display (TFT/LCD) monitors. At ROC analysis, the average area under curve (Az) for US abdominal image was 0.874 at the ratio of 36.6:1. The compressed image size was only 2.7% for US original at this ratio. The objective parameters showed the higher the mean squared error (MSE) or root mean squared error (RMSE) values, the poorer the image quality. The higher signal-to-noise ratio (SNR) or peak signal-to-noise ratio (PSNR) values indicated better image quality. The average RMSE, PSNR at 36.6:1 for US were 4.84 ± 0.14, 35.45 dB, respectively. This finding suggests that, on the basis of the patient sample, wavelet compression of abdominal US to a ratio of 36.6:1 did not adversely affect diagnostic performance or evaluation error for radiologists' interpretation so as to risk affecting diagnosis

  9. A New Algorithm for the On-Board Compression of Hyperspectral Images

    Directory of Open Access Journals (Sweden)

    Raúl Guerra

    2018-03-01

    Full Text Available Hyperspectral sensors are able to provide information that is useful for many different applications. However, the huge amounts of data collected by these sensors are not exempt of drawbacks, especially in remote sensing environments where the hyperspectral images are collected on-board satellites and need to be transferred to the earth’s surface. In this situation, an efficient compression of the hyperspectral images is mandatory in order to save bandwidth and storage space. Lossless compression algorithms have been traditionally preferred, in order to preserve all the information present in the hyperspectral cube for scientific purposes, despite their limited compression ratio. Nevertheless, the increment in the data-rate of the new-generation sensors is making more critical the necessity of obtaining higher compression ratios, making it necessary to use lossy compression techniques. A new transform-based lossy compression algorithm, namely Lossy Compression Algorithm for Hyperspectral Image Systems (HyperLCA, is proposed in this manuscript. This compressor has been developed for achieving high compression ratios with a good compression performance at a reasonable computational burden. An extensive amount of experiments have been performed in order to evaluate the goodness of the proposed HyperLCA compressor using different calibrated and uncalibrated hyperspectral images from the AVIRIS and Hyperion sensors. The results provided by the proposed HyperLCA compressor have been evaluated and compared against those produced by the most relevant state-of-the-art compression solutions. The theoretical and experimental evidence indicates that the proposed algorithm represents an excellent option for lossy compressing hyperspectral images, especially for applications where the available computational resources are limited, such as on-board scenarios.

  10. Wavelet-Based Modelling of Spectral BRDF Data

    OpenAIRE

    Claustres , Luc; Boucher , Yannick; Paulin , Mathias

    2004-01-01

    International audience; The Bidirectional Reflectance Distribution Function (BRDF) is an important surface property, and is commonly used to describe reflected light patterns. However, the BRDF is a complex function since it has four angular degrees of freedom and also depends on the wavelength. The direct use of BRDF data set may be inefficient for scene modelling algorithms for example. Thus, models provide compression and additional functionalities like interpolation. One common way consis...

  11. Unified compression and encryption algorithm for fast and secure network communications

    International Nuclear Information System (INIS)

    Rizvi, S.M.J.; Hussain, M.; Qaiser, N.

    2005-01-01

    Compression and encryption of data are two vital requirements for the fast and secure transmission of data in the network based communications. In this paper an algorithm is presented based on adaptive Huffman encoding for unified compression and encryption of Unicode encoded textual data. The Huffman encoding weakness that same tree is needed for decoding is utilized in the algorithm presented as an extra layer of security, which is updated whenever the frequency change is above the specified threshold level. The results show that we get compression comparable to popular zip format and in addition to that data has got an additional layer of encryption that makes it more secure. Thus unified algorithm presented here can be used for network communications between different branches of banks, e- Government programs and national database and registration centers where data transmission requires both compression and encryption. (author)

  12. Resource efficient data compression algorithms for demanding, WSN based biomedical applications.

    Science.gov (United States)

    Antonopoulos, Christos P; Voros, Nikolaos S

    2016-02-01

    During the last few years, medical research areas of critical importance such as Epilepsy monitoring and study, increasingly utilize wireless sensor network technologies in order to achieve better understanding and significant breakthroughs. However, the limited memory and communication bandwidth offered by WSN platforms comprise a significant shortcoming to such demanding application scenarios. Although, data compression can mitigate such deficiencies there is a lack of objective and comprehensive evaluation of relative approaches and even more on specialized approaches targeting specific demanding applications. The research work presented in this paper focuses on implementing and offering an in-depth experimental study regarding prominent, already existing as well as novel proposed compression algorithms. All algorithms have been implemented in a common Matlab framework. A major contribution of this paper, that differentiates it from similar research efforts, is the employment of real world Electroencephalography (EEG) and Electrocardiography (ECG) datasets comprising the two most demanding Epilepsy modalities. Emphasis is put on WSN applications, thus the respective metrics focus on compression rate and execution latency for the selected datasets. The evaluation results reveal significant performance and behavioral characteristics of the algorithms related to their complexity and the relative negative effect on compression latency as opposed to the increased compression rate. It is noted that the proposed schemes managed to offer considerable advantage especially aiming to achieve the optimum tradeoff between compression rate-latency. Specifically, proposed algorithm managed to combine highly completive level of compression while ensuring minimum latency thus exhibiting real-time capabilities. Additionally, one of the proposed schemes is compared against state-of-the-art general-purpose compression algorithms also exhibiting considerable advantages as far as the

  13. The Physics of Compressive Sensing and the Gradient-Based Recovery Algorithms

    OpenAIRE

    Dai, Qi; Sha, Wei

    2009-01-01

    The physics of compressive sensing (CS) and the gradient-based recovery algorithms are presented. First, the different forms for CS are summarized. Second, the physical meanings of coherence and measurement are given. Third, the gradient-based recovery algorithms and their geometry explanations are provided. Finally, we conclude the report and give some suggestion for future work.

  14. An Implementation Of Elias Delta Code And ElGamal Algorithm In Image Compression And Security

    Science.gov (United States)

    Rachmawati, Dian; Andri Budiman, Mohammad; Saffiera, Cut Amalia

    2018-01-01

    In data transmission such as transferring an image, confidentiality, integrity, and efficiency of data storage aspects are highly needed. To maintain the confidentiality and integrity of data, one of the techniques used is ElGamal. The strength of this algorithm is found on the difficulty of calculating discrete logs in a large prime modulus. ElGamal belongs to the class of Asymmetric Key Algorithm and resulted in enlargement of the file size, therefore data compression is required. Elias Delta Code is one of the compression algorithms that use delta code table. The image was first compressed using Elias Delta Code Algorithm, then the result of the compression was encrypted by using ElGamal algorithm. Prime test was implemented using Agrawal Biswas Algorithm. The result showed that ElGamal method could maintain the confidentiality and integrity of data with MSE and PSNR values 0 and infinity. The Elias Delta Code method generated compression ratio and space-saving each with average values of 62.49%, and 37.51%.

  15. Wavelet-based verification of the quantitative precipitation forecast

    Science.gov (United States)

    Yano, Jun-Ichi; Jakubiak, Bogumil

    2016-06-01

    This paper explores the use of wavelets for spatial verification of quantitative precipitation forecasts (QPF), and especially the capacity of wavelets to provide both localization and scale information. Two 24-h forecast experiments using the two versions of the Coupled Ocean/Atmosphere Mesoscale Prediction System (COAMPS) on 22 August 2010 over Poland are used to illustrate the method. Strong spatial localizations and associated intermittency of the precipitation field make verification of QPF difficult using standard statistical methods. The wavelet becomes an attractive alternative, because it is specifically designed to extract spatially localized features. The wavelet modes are characterized by the two indices for the scale and the localization. Thus, these indices can simply be employed for characterizing the performance of QPF in scale and localization without any further elaboration or tunable parameters. Furthermore, spatially-localized features can be extracted in wavelet space in a relatively straightforward manner with only a weak dependence on a threshold. Such a feature may be considered an advantage of the wavelet-based method over more conventional "object" oriented verification methods, as the latter tend to represent strong threshold sensitivities. The present paper also points out limits of the so-called "scale separation" methods based on wavelets. Our study demonstrates how these wavelet-based QPF verifications can be performed straightforwardly. Possibilities for further developments of the wavelet-based methods, especially towards a goal of identifying a weak physical process contributing to forecast error, are also pointed out.

  16. Comparison of JPEG and wavelet compression on intraoral digital radiographic images

    International Nuclear Information System (INIS)

    Kim, Eun Kyung

    2004-01-01

    To determine the proper image compression method and ratio without image quality degradation in intraoral digital radiographic images, comparing the discrete cosine transform (DCT)-based JPEG with the wavelet-based JPEG 2000 algorithm. Thirty extracted sound teeth and thirty extracted teeth with occlusal caries were used for this study. Twenty plaster blocks were made with three teeth each. They were radiographically exposed using CDR sensors (Schick Inc., Long Island, USA). Digital images were compressed to JPEG format, using Adobe Photoshop v. 7.0 and JPEG 2000 format using Jasper program with compression ratios of 5 : 1, 9 : 1, 14 : 1, 28 : 1 each. To evaluate the lesion detectability, receiver operating characteristic (ROC) analysis was performed by the three oral and maxillofacial radiologists. To evaluate the image quality, all the compressed images were assessed subjectively using 5 grades, in comparison to the original uncompressed images. Compressed images up to compression ratio of 14: 1 in JPEG and 28 : 1 in JPEG 2000 showed nearly the same the lesion detectability as the original images. In the subjective assessment of image quality, images up to compression ratio of 9 : 1 in JPEG and 14 : 1 in JPEG 2000 showed minute mean paired differences from the original images. The results showed that the clinically acceptable compression ratios were up to 9 : 1 for JPEG and 14 : 1 for JPEG 2000. The wavelet-based JPEG 2000 is a better compression method, comparing to DCT-based JPEG for intraoral digital radiographic images.

  17. Control of equipment isolation system using wavelet-based hybrid sliding mode control

    Science.gov (United States)

    Huang, Shieh-Kung; Loh, Chin-Hsiung

    2017-04-01

    -structural components. The aim of this paper is to develop a hybrid control algorithm on the control of both structures and equipments simultaneously to overcome the limitations of classical feedback control through combining the advantage of classic LQR and SMC. To suppress vibrations with the frequency contents of strong earthquakes differing from the natural frequencies of civil structures, the hybrid control algorithms integrated with the wavelet-base vibration control algorithm is developed. The performance of classical, hybrid, and wavelet-based hybrid control algorithms as well as the responses of structure and non-structural components are evaluated and discussed through numerical simulation in this study.

  18. Fast algorithm for exploring and compressing of large hyperspectral images

    DEFF Research Database (Denmark)

    Kucheryavskiy, Sergey

    2011-01-01

    A new method for calculation of latent variable space for exploratory analysis and dimension reduction of large hyperspectral images is proposed. The method is based on significant downsampling of image pixels with preservation of pixels’ structure in feature (variable) space. To achieve this, in...... can be used first of all for fast compression of large data arrays with principal component analysis or similar projection techniques....

  19. A Hybrid Wavelet-Based Method for the Peak Detection of Photoplethysmography Signals

    Directory of Open Access Journals (Sweden)

    Suyi Li

    2017-01-01

    Full Text Available The noninvasive peripheral oxygen saturation (SpO2 and the pulse rate can be extracted from photoplethysmography (PPG signals. However, the accuracy of the extraction is directly affected by the quality of the signal obtained and the peak of the signal identified; therefore, a hybrid wavelet-based method is proposed in this study. Firstly, we suppressed the partial motion artifacts and corrected the baseline drift by using a wavelet method based on the principle of wavelet multiresolution. And then, we designed a quadratic spline wavelet modulus maximum algorithm to identify the PPG peaks automatically. To evaluate this hybrid method, a reflective pulse oximeter was used to acquire ten subjects’ PPG signals under sitting, raising hand, and gently walking postures, and the peak recognition results on the raw signal and on the corrected signal were compared, respectively. The results showed that the hybrid method not only corrected the morphologies of the signal well but also optimized the peaks identification quality, subsequently elevating the measurement accuracy of SpO2 and the pulse rate. As a result, our hybrid wavelet-based method profoundly optimized the evaluation of respiratory function and heart rate variability analysis.

  20. A Hybrid Wavelet-Based Method for the Peak Detection of Photoplethysmography Signals.

    Science.gov (United States)

    Li, Suyi; Jiang, Shanqing; Jiang, Shan; Wu, Jiang; Xiong, Wenji; Diao, Shu

    2017-01-01

    The noninvasive peripheral oxygen saturation (SpO 2 ) and the pulse rate can be extracted from photoplethysmography (PPG) signals. However, the accuracy of the extraction is directly affected by the quality of the signal obtained and the peak of the signal identified; therefore, a hybrid wavelet-based method is proposed in this study. Firstly, we suppressed the partial motion artifacts and corrected the baseline drift by using a wavelet method based on the principle of wavelet multiresolution. And then, we designed a quadratic spline wavelet modulus maximum algorithm to identify the PPG peaks automatically. To evaluate this hybrid method, a reflective pulse oximeter was used to acquire ten subjects' PPG signals under sitting, raising hand, and gently walking postures, and the peak recognition results on the raw signal and on the corrected signal were compared, respectively. The results showed that the hybrid method not only corrected the morphologies of the signal well but also optimized the peaks identification quality, subsequently elevating the measurement accuracy of SpO 2 and the pulse rate. As a result, our hybrid wavelet-based method profoundly optimized the evaluation of respiratory function and heart rate variability analysis.

  1. A Hybrid Wavelet-Based Method for the Peak Detection of Photoplethysmography Signals

    Science.gov (United States)

    Jiang, Shanqing; Jiang, Shan; Wu, Jiang; Xiong, Wenji

    2017-01-01

    The noninvasive peripheral oxygen saturation (SpO2) and the pulse rate can be extracted from photoplethysmography (PPG) signals. However, the accuracy of the extraction is directly affected by the quality of the signal obtained and the peak of the signal identified; therefore, a hybrid wavelet-based method is proposed in this study. Firstly, we suppressed the partial motion artifacts and corrected the baseline drift by using a wavelet method based on the principle of wavelet multiresolution. And then, we designed a quadratic spline wavelet modulus maximum algorithm to identify the PPG peaks automatically. To evaluate this hybrid method, a reflective pulse oximeter was used to acquire ten subjects' PPG signals under sitting, raising hand, and gently walking postures, and the peak recognition results on the raw signal and on the corrected signal were compared, respectively. The results showed that the hybrid method not only corrected the morphologies of the signal well but also optimized the peaks identification quality, subsequently elevating the measurement accuracy of SpO2 and the pulse rate. As a result, our hybrid wavelet-based method profoundly optimized the evaluation of respiratory function and heart rate variability analysis. PMID:29250135

  2. JPEG2000-Compatible Scalable Scheme for Wavelet-Based Video Coding

    Directory of Open Access Journals (Sweden)

    Thomas André

    2007-03-01

    Full Text Available We present a simple yet efficient scalable scheme for wavelet-based video coders, able to provide on-demand spatial, temporal, and SNR scalability, and fully compatible with the still-image coding standard JPEG2000. Whereas hybrid video coders must undergo significant changes in order to support scalability, our coder only requires a specific wavelet filter for temporal analysis, as well as an adapted bit allocation procedure based on models of rate-distortion curves. Our study shows that scalably encoded sequences have the same or almost the same quality than nonscalably encoded ones, without a significant increase in complexity. A full compatibility with Motion JPEG2000, which tends to be a serious candidate for the compression of high-definition video sequences, is ensured.

  3. JPEG2000-Compatible Scalable Scheme for Wavelet-Based Video Coding

    Directory of Open Access Journals (Sweden)

    André Thomas

    2007-01-01

    Full Text Available We present a simple yet efficient scalable scheme for wavelet-based video coders, able to provide on-demand spatial, temporal, and SNR scalability, and fully compatible with the still-image coding standard JPEG2000. Whereas hybrid video coders must undergo significant changes in order to support scalability, our coder only requires a specific wavelet filter for temporal analysis, as well as an adapted bit allocation procedure based on models of rate-distortion curves. Our study shows that scalably encoded sequences have the same or almost the same quality than nonscalably encoded ones, without a significant increase in complexity. A full compatibility with Motion JPEG2000, which tends to be a serious candidate for the compression of high-definition video sequences, is ensured.

  4. [A wavelet neural network algorithm of EEG signals data compression and spikes recognition].

    Science.gov (United States)

    Zhang, Y; Liu, A; Yu, K

    1999-06-01

    A novel method of EEG signals compression representation and epileptiform spikes recognition based on wavelet neural network and its algorithm is presented. The wavelet network not only can compress data effectively but also can recover original signal. In addition, the characters of the spikes and the spike-slow rhythm are auto-detected from the time-frequency isoline of EEG signal. This method is well worth using in the field of the electrophysiological signal processing and time-frequency analyzing.

  5. A novel pulse compression algorithm for frequency modulated active thermography using band-pass filter

    Science.gov (United States)

    Chatterjee, Krishnendu; Roy, Deboshree; Tuli, Suneet

    2017-05-01

    This paper proposes a novel pulse compression algorithm, in the context of frequency modulated thermal wave imaging. The compression filter is derived from a predefined reference pixel in a recorded video, which contains direct measurement of the excitation signal alongside the thermal image of a test piece. The filter causes all the phases of the constituent frequencies to be adjusted to nearly zero value, so that on reconstruction a pulse is obtained. Further, due to band-limited nature of the excitation, signal-to-noise ratio is improved by suppressing out-of-band noise. The result is similar to that of a pulsed thermography experiment, although the peak power is drastically reduced. The algorithm is successfully demonstrated on mild steel and carbon fibre reference samples. Objective comparisons of the proposed pulse compression algorithm with the existing techniques are presented.

  6. Reconstruction algorithm in compressed sensing based on maximum a posteriori estimation

    International Nuclear Information System (INIS)

    Takeda, Koujin; Kabashima, Yoshiyuki

    2013-01-01

    We propose a systematic method for constructing a sparse data reconstruction algorithm in compressed sensing at a relatively low computational cost for general observation matrix. It is known that the cost of ℓ 1 -norm minimization using a standard linear programming algorithm is O(N 3 ). We show that this cost can be reduced to O(N 2 ) by applying the approach of posterior maximization. Furthermore, in principle, the algorithm from our approach is expected to achieve the widest successful reconstruction region, which is evaluated from theoretical argument. We also discuss the relation between the belief propagation-based reconstruction algorithm introduced in preceding works and our approach

  7. Research on the Compression Algorithm of the Infrared Thermal Image Sequence Based on Differential Evolution and Double Exponential Decay Model

    Science.gov (United States)

    Zhang, Jin-Yu; Meng, Xiang-Bing; Xu, Wei; Zhang, Wei; Zhang, Yong

    2014-01-01

    This paper has proposed a new thermal wave image sequence compression algorithm by combining double exponential decay fitting model and differential evolution algorithm. This study benchmarked fitting compression results and precision of the proposed method was benchmarked to that of the traditional methods via experiment; it investigated the fitting compression performance under the long time series and improved model and validated the algorithm by practical thermal image sequence compression and reconstruction. The results show that the proposed algorithm is a fast and highly precise infrared image data processing method. PMID:24696649

  8. Research on the Compression Algorithm of the Infrared Thermal Image Sequence Based on Differential Evolution and Double Exponential Decay Model

    Directory of Open Access Journals (Sweden)

    Jin-Yu Zhang

    2014-01-01

    Full Text Available This paper has proposed a new thermal wave image sequence compression algorithm by combining double exponential decay fitting model and differential evolution algorithm. This study benchmarked fitting compression results and precision of the proposed method was benchmarked to that of the traditional methods via experiment; it investigated the fitting compression performance under the long time series and improved model and validated the algorithm by practical thermal image sequence compression and reconstruction. The results show that the proposed algorithm is a fast and highly precise infrared image data processing method.

  9. Fast vector quantization using a Bat algorithm for image compression

    Directory of Open Access Journals (Sweden)

    Chiranjeevi Karri

    2016-06-01

    Full Text Available Linde–Buzo–Gray (LBG, a traditional method of vector quantization (VQ generates a local optimal codebook which results in lower PSNR value. The performance of vector quantization (VQ depends on the appropriate codebook, so researchers proposed optimization techniques for global codebook generation. Particle swarm optimization (PSO and Firefly algorithm (FA generate an efficient codebook, but undergoes instability in convergence when particle velocity is high and non-availability of brighter fireflies in the search space respectively. In this paper, we propose a new algorithm called BA-LBG which uses Bat Algorithm on initial solution of LBG. It produces an efficient codebook with less computational time and results very good PSNR due to its automatic zooming feature using adjustable pulse emission rate and loudness of bats. From the results, we observed that BA-LBG has high PSNR compared to LBG, PSO-LBG, Quantum PSO-LBG, HBMO-LBG and FA-LBG, and its average convergence speed is 1.841 times faster than HBMO-LBG and FA-LBG but no significance difference with PSO.

  10. SpotCaliper: fast wavelet-based spot detection with accurate size estimation.

    Science.gov (United States)

    Püspöki, Zsuzsanna; Sage, Daniel; Ward, John Paul; Unser, Michael

    2016-04-15

    SpotCaliper is a novel wavelet-based image-analysis software providing a fast automatic detection scheme for circular patterns (spots), combined with the precise estimation of their size. It is implemented as an ImageJ plugin with a friendly user interface. The user is allowed to edit the results by modifying the measurements (in a semi-automated way), extract data for further analysis. The fine tuning of the detections includes the possibility of adjusting or removing the original detections, as well as adding further spots. The main advantage of the software is its ability to capture the size of spots in a fast and accurate way. http://bigwww.epfl.ch/algorithms/spotcaliper/ zsuzsanna.puspoki@epfl.ch Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  11. Freeing Space for NASA: Incorporating a Lossless Compression Algorithm into NASA's FOSS System

    Science.gov (United States)

    Fiechtner, Kaitlyn; Parker, Allen

    2011-01-01

    NASA's Fiber Optic Strain Sensing (FOSS) system can gather and store up to 1,536,000 bytes (1.46 megabytes) per second. Since the FOSS system typically acquires hours - or even days - of data, the system can gather hundreds of gigabytes of data for a given test event. To store such large quantities of data more effectively, NASA is modifying a Lempel-Ziv-Oberhumer (LZO) lossless data compression program to compress data as it is being acquired in real time. After proving that the algorithm is capable of compressing the data from the FOSS system, the LZO program will be modified and incorporated into the FOSS system. Implementing an LZO compression algorithm will instantly free up memory space without compromising any data obtained. With the availability of memory space, the FOSS system can be used more efficiently on test specimens, such as Unmanned Aerial Vehicles (UAVs) that can be in flight for days. By integrating the compression algorithm, the FOSS system can continue gathering data, even on longer flights.

  12. An Improved Fast Compressive Tracking Algorithm Based on Online Random Forest Classifier

    Directory of Open Access Journals (Sweden)

    Xiong Jintao

    2016-01-01

    Full Text Available The fast compressive tracking (FCT algorithm is a simple and efficient algorithm, which is proposed in recent years. But, it is difficult to deal with the factors such as occlusion, appearance changes, pose variation, etc in processing. The reasons are that, Firstly, even if the naive Bayes classifier is fast in training, it is not robust concerning the noise. Secondly, the parameters are required to vary with the unique environment for accurate tracking. In this paper, we propose an improved fast compressive tracking algorithm based on online random forest (FCT-ORF for robust visual tracking. Firstly, we combine ideas with the adaptive compressive sensing theory regarding the weighted random projection to exploit both local and discriminative information of the object. The second reason is the online random forest classifier for online tracking which is demonstrated with more robust to the noise adaptively and high computational efficiency. The experimental results show that the algorithm we have proposed has a better performance in the field of occlusion, appearance changes, and pose variation than the fast compressive tracking algorithm’s contribution.

  13. Wavelet-based moment invariants for pattern recognition

    Science.gov (United States)

    Chen, Guangyi; Xie, Wenfang

    2011-07-01

    Moment invariants have received a lot of attention as features for identification and inspection of two-dimensional shapes. In this paper, two sets of novel moments are proposed by using the auto-correlation of wavelet functions and the dual-tree complex wavelet functions. It is well known that the wavelet transform lacks the property of shift invariance. A little shift in the input signal will cause very different output wavelet coefficients. The autocorrelation of wavelet functions and the dual-tree complex wavelet functions, on the other hand, are shift-invariant, which is very important in pattern recognition. Rotation invariance is the major concern in this paper, while translation invariance and scale invariance can be achieved by standard normalization techniques. The Gaussian white noise is added to the noise-free images and the noise levels vary with different signal-to-noise ratios. Experimental results conducted in this paper show that the proposed wavelet-based moments outperform Zernike's moments and the Fourier-wavelet descriptor for pattern recognition under different rotation angles and different noise levels. It can be seen that the proposed wavelet-based moments can do an excellent job even when the noise levels are very high.

  14. General purpose graphic processing unit implementation of adaptive pulse compression algorithms

    Science.gov (United States)

    Cai, Jingxiao; Zhang, Yan

    2017-07-01

    This study introduces a practical approach to implement real-time signal processing algorithms for general surveillance radar based on NVIDIA graphical processing units (GPUs). The pulse compression algorithms are implemented using compute unified device architecture (CUDA) libraries such as CUDA basic linear algebra subroutines and CUDA fast Fourier transform library, which are adopted from open source libraries and optimized for the NVIDIA GPUs. For more advanced, adaptive processing algorithms such as adaptive pulse compression, customized kernel optimization is needed and investigated. A statistical optimization approach is developed for this purpose without needing much knowledge of the physical configurations of the kernels. It was found that the kernel optimization approach can significantly improve the performance. Benchmark performance is compared with the CPU performance in terms of processing accelerations. The proposed implementation framework can be used in various radar systems including ground-based phased array radar, airborne sense and avoid radar, and aerospace surveillance radar.

  15. A Compressed Sensing-based Image Reconstruction Algorithm for Solar Flare X-Ray Observations

    Energy Technology Data Exchange (ETDEWEB)

    Felix, Simon; Bolzern, Roman; Battaglia, Marina, E-mail: simon.felix@fhnw.ch, E-mail: roman.bolzern@fhnw.ch, E-mail: marina.battaglia@fhnw.ch [University of Applied Sciences and Arts Northwestern Switzerland FHNW, 5210 Windisch (Switzerland)

    2017-11-01

    One way of imaging X-ray emission from solar flares is to measure Fourier components of the spatial X-ray source distribution. We present a new compressed sensing-based algorithm named VIS-CS, which reconstructs the spatial distribution from such Fourier components. We demonstrate the application of the algorithm on synthetic and observed solar flare X-ray data from the Reuven Ramaty High Energy Solar Spectroscopic Imager satellite and compare its performance with existing algorithms. VIS-CS produces competitive results with accurate photometry and morphology, without requiring any algorithm- and X-ray-source-specific parameter tuning. Its robustness and performance make this algorithm ideally suited for the generation of quicklook images or large image cubes without user intervention, such as for imaging spectroscopy analysis.

  16. A Compressed Sensing-based Image Reconstruction Algorithm for Solar Flare X-Ray Observations

    Science.gov (United States)

    Felix, Simon; Bolzern, Roman; Battaglia, Marina

    2017-11-01

    One way of imaging X-ray emission from solar flares is to measure Fourier components of the spatial X-ray source distribution. We present a new compressed sensing-based algorithm named VIS_CS, which reconstructs the spatial distribution from such Fourier components. We demonstrate the application of the algorithm on synthetic and observed solar flare X-ray data from the Reuven Ramaty High Energy Solar Spectroscopic Imager satellite and compare its performance with existing algorithms. VIS_CS produces competitive results with accurate photometry and morphology, without requiring any algorithm- and X-ray-source-specific parameter tuning. Its robustness and performance make this algorithm ideally suited for the generation of quicklook images or large image cubes without user intervention, such as for imaging spectroscopy analysis.

  17. Wavelet transform and Huffman coding based electrocardiogram compression algorithm: Application to telecardiology

    International Nuclear Information System (INIS)

    Chouakri, S A; Djaafri, O; Taleb-Ahmed, A

    2013-01-01

    We present in this work an algorithm for electrocardiogram (ECG) signal compression aimed to its transmission via telecommunication channel. Basically, the proposed ECG compression algorithm is articulated on the use of wavelet transform, leading to low/high frequency components separation, high order statistics based thresholding, using level adjusted kurtosis value, to denoise the ECG signal, and next a linear predictive coding filter is applied to the wavelet coefficients producing a lower variance signal. This latter one will be coded using the Huffman encoding yielding an optimal coding length in terms of average value of bits per sample. At the receiver end point, with the assumption of an ideal communication channel, the inverse processes are carried out namely the Huffman decoding, inverse linear predictive coding filter and inverse discrete wavelet transform leading to the estimated version of the ECG signal. The proposed ECG compression algorithm is tested upon a set of ECG records extracted from the MIT-BIH Arrhythmia Data Base including different cardiac anomalies as well as the normal ECG signal. The obtained results are evaluated in terms of compression ratio and mean square error which are, respectively, around 1:8 and 7%. Besides the numerical evaluation, the visual perception demonstrates the high quality of ECG signal restitution where the different ECG waves are recovered correctly

  18. An compression algorithm for medical images and a display with the decoding function

    International Nuclear Information System (INIS)

    Gotoh, Toshiyuki; Nakagawa, Yukihiro; Shiohara, Morito; Yoshida, Masumi

    1990-01-01

    This paper describes and efficient image compression method for medical images, a high-speed display with the decoding function. In our method, an input image is divided into blocks, and either of Discrete Cosine Transform coding (DCT) or Block Truncation Coding (BTC) is adaptively applied on each block to improve image quality. The display, we developed, receives the compressed data from the host computer and reconstruct images of good quality at high speed using four decoding microprocessors on which our algorithm is implemented in pipeline. By the experiments, our method and display were verified to be effective. (author)

  19. Efficient Compression of Far Field Matrices in Multipole Algorithms based on Spherical Harmonics and Radiating Modes

    Directory of Open Access Journals (Sweden)

    A. Schroeder

    2012-09-01

    Full Text Available This paper proposes a compression of far field matrices in the fast multipole method and its multilevel extension for electromagnetic problems. The compression is based on a spherical harmonic representation of radiation patterns in conjunction with a radiating mode expression of the surface current. The method is applied to study near field effects and the far field of an antenna placed on a ship surface. Furthermore, the electromagnetic scattering of an electrically large plate is investigated. It is demonstrated, that the proposed technique leads to a significant memory saving, making multipole algorithms even more efficient without compromising the accuracy.

  20. Batched QR and SVD Algorithms on GPUs with Applications in Hierarchical Matrix Compression

    KAUST Repository

    Halim Boukaram, Wajih

    2017-09-14

    We present high performance implementations of the QR and the singular value decomposition of a batch of small matrices hosted on the GPU with applications in the compression of hierarchical matrices. The one-sided Jacobi algorithm is used for its simplicity and inherent parallelism as a building block for the SVD of low rank blocks using randomized methods. We implement multiple kernels based on the level of the GPU memory hierarchy in which the matrices can reside and show substantial speedups against streamed cuSOLVER SVDs. The resulting batched routine is a key component of hierarchical matrix compression, opening up opportunities to perform H-matrix arithmetic efficiently on GPUs.

  1. Batched QR and SVD Algorithms on GPUs with Applications in Hierarchical Matrix Compression

    KAUST Repository

    Halim Boukaram, Wajih; Turkiyyah, George; Ltaief, Hatem; Keyes, David E.

    2017-01-01

    We present high performance implementations of the QR and the singular value decomposition of a batch of small matrices hosted on the GPU with applications in the compression of hierarchical matrices. The one-sided Jacobi algorithm is used for its simplicity and inherent parallelism as a building block for the SVD of low rank blocks using randomized methods. We implement multiple kernels based on the level of the GPU memory hierarchy in which the matrices can reside and show substantial speedups against streamed cuSOLVER SVDs. The resulting batched routine is a key component of hierarchical matrix compression, opening up opportunities to perform H-matrix arithmetic efficiently on GPUs.

  2. From cardinal spline wavelet bases to highly coherent dictionaries

    International Nuclear Information System (INIS)

    Andrle, Miroslav; Rebollo-Neira, Laura

    2008-01-01

    Wavelet families arise by scaling and translations of a prototype function, called the mother wavelet. The construction of wavelet bases for cardinal spline spaces is generally carried out within the multi-resolution analysis scheme. Thus, the usual way of increasing the dimension of the multi-resolution subspaces is by augmenting the scaling factor. We show here that, when working on a compact interval, the identical effect can be achieved without changing the wavelet scale but reducing the translation parameter. By such a procedure we generate a redundant frame, called a dictionary, spanning the same spaces as a wavelet basis but with wavelets of broader support. We characterize the correlation of the dictionary elements by measuring their 'coherence' and produce examples illustrating the relevance of highly coherent dictionaries to problems of sparse signal representation. (fast track communication)

  3. Adaptive Image Transmission Scheme over Wavelet-Based OFDM System

    Institute of Scientific and Technical Information of China (English)

    GAOXinying; YUANDongfeng; ZHANGHaixia

    2005-01-01

    In this paper an adaptive image transmission scheme is proposed over Wavelet-based OFDM (WOFDM) system with Unequal error protection (UEP) by the design of non-uniform signal constellation in MLC. Two different data division schemes: byte-based and bitbased, are analyzed and compared. Different bits are protected unequally according to their different contribution to the image quality in bit-based data division scheme, which causes UEP combined with this scheme more powerful than that with byte-based scheme. Simulation results demonstrate that image transmission by UEP with bit-based data division scheme presents much higher PSNR values and surprisingly better image quality. Furthermore, by considering the tradeoff of complexity and BER performance, Haar wavelet with the shortest compactly supported filter length is the most suitable one among orthogonal Daubechies wavelet series in our proposed system.

  4. Anisotropy in wavelet-based phase field models

    KAUST Repository

    Korzec, Maciek; Mü nch, Andreas; Sü li, Endre; Wagner, Barbara

    2016-01-01

    When describing the anisotropic evolution of microstructures in solids using phase-field models, the anisotropy of the crystalline phases is usually introduced into the interfacial energy by directional dependencies of the gradient energy coefficients. We consider an alternative approach based on a wavelet analogue of the Laplace operator that is intrinsically anisotropic and linear. The paper focuses on the classical coupled temperature/Ginzburg--Landau type phase-field model for dendritic growth. For the model based on the wavelet analogue, existence, uniqueness and continuous dependence on initial data are proved for weak solutions. Numerical studies of the wavelet based phase-field model show dendritic growth similar to the results obtained for classical phase-field models.

  5. Anisotropy in wavelet-based phase field models

    KAUST Repository

    Korzec, Maciek

    2016-04-01

    When describing the anisotropic evolution of microstructures in solids using phase-field models, the anisotropy of the crystalline phases is usually introduced into the interfacial energy by directional dependencies of the gradient energy coefficients. We consider an alternative approach based on a wavelet analogue of the Laplace operator that is intrinsically anisotropic and linear. The paper focuses on the classical coupled temperature/Ginzburg--Landau type phase-field model for dendritic growth. For the model based on the wavelet analogue, existence, uniqueness and continuous dependence on initial data are proved for weak solutions. Numerical studies of the wavelet based phase-field model show dendritic growth similar to the results obtained for classical phase-field models.

  6. Detection of Defective Sensors in Phased Array Using Compressed Sensing and Hybrid Genetic Algorithm

    Directory of Open Access Journals (Sweden)

    Shafqat Ullah Khan

    2016-01-01

    Full Text Available A compressed sensing based array diagnosis technique has been presented. This technique starts from collecting the measurements of the far-field pattern. The system linking the difference between the field measured using the healthy reference array and the field radiated by the array under test is solved using a genetic algorithm (GA, parallel coordinate descent (PCD algorithm, and then a hybridized GA with PCD algorithm. These algorithms are applied for fully and partially defective antenna arrays. The simulation results indicate that the proposed hybrid algorithm outperforms in terms of localization of element failure with a small number of measurements. In the proposed algorithm, the slow and early convergence of GA has been avoided by combining it with PCD algorithm. It has been shown that the hybrid GA-PCD algorithm provides an accurate diagnosis of fully and partially defective sensors as compared to GA or PCD alone. Different simulations have been provided to validate the performance of the designed algorithms in diversified scenarios.

  7. Wavelet based free-form deformations for nonrigid registration

    Science.gov (United States)

    Sun, Wei; Niessen, Wiro J.; Klein, Stefan

    2014-03-01

    In nonrigid registration, deformations may take place on the coarse and fine scales. For the conventional B-splines based free-form deformation (FFD) registration, these coarse- and fine-scale deformations are all represented by basis functions of a single scale. Meanwhile, wavelets have been proposed as a signal representation suitable for multi-scale problems. Wavelet analysis leads to a unique decomposition of a signal into its coarse- and fine-scale components. Potentially, this could therefore be useful for image registration. In this work, we investigate whether a wavelet-based FFD model has advantages for nonrigid image registration. We use a B-splines based wavelet, as defined by Cai and Wang.1 This wavelet is expressed as a linear combination of B-spline basis functions. Derived from the original B-spline function, this wavelet is smooth, differentiable, and compactly supported. The basis functions of this wavelet are orthogonal across scales in Sobolev space. This wavelet was previously used for registration in computer vision, in 2D optical flow problems,2 but it was not compared with the conventional B-spline FFD in medical image registration problems. An advantage of choosing this B-splines based wavelet model is that the space of allowable deformation is exactly equivalent to that of the traditional B-spline. The wavelet transformation is essentially a (linear) reparameterization of the B-spline transformation model. Experiments on 10 CT lung and 18 T1-weighted MRI brain datasets show that wavelet based registration leads to smoother deformation fields than traditional B-splines based registration, while achieving better accuracy.

  8. Performance comparison between total variation (TV)-based compressed sensing and statistical iterative reconstruction algorithms

    International Nuclear Information System (INIS)

    Tang Jie; Nett, Brian E; Chen Guanghong

    2009-01-01

    Of all available reconstruction methods, statistical iterative reconstruction algorithms appear particularly promising since they enable accurate physical noise modeling. The newly developed compressive sampling/compressed sensing (CS) algorithm has shown the potential to accurately reconstruct images from highly undersampled data. The CS algorithm can be implemented in the statistical reconstruction framework as well. In this study, we compared the performance of two standard statistical reconstruction algorithms (penalized weighted least squares and q-GGMRF) to the CS algorithm. In assessing the image quality using these iterative reconstructions, it is critical to utilize realistic background anatomy as the reconstruction results are object dependent. A cadaver head was scanned on a Varian Trilogy system at different dose levels. Several figures of merit including the relative root mean square error and a quality factor which accounts for the noise performance and the spatial resolution were introduced to objectively evaluate reconstruction performance. A comparison is presented between the three algorithms for a constant undersampling factor comparing different algorithms at several dose levels. To facilitate this comparison, the original CS method was formulated in the framework of the statistical image reconstruction algorithms. Important conclusions of the measurements from our studies are that (1) for realistic neuro-anatomy, over 100 projections are required to avoid streak artifacts in the reconstructed images even with CS reconstruction, (2) regardless of the algorithm employed, it is beneficial to distribute the total dose to more views as long as each view remains quantum noise limited and (3) the total variation-based CS method is not appropriate for very low dose levels because while it can mitigate streaking artifacts, the images exhibit patchy behavior, which is potentially harmful for medical diagnosis.

  9. The Modified Frequency Algorithm of Digital Watermarking of Still Images Resistant to JPEG Compression

    Directory of Open Access Journals (Sweden)

    V. A. Batura

    2015-01-01

    Full Text Available Digital watermarking is an effective copyright protection for multimedia products (in particular, still images. Digital marking represents process of embedding into object of protection of a digital watermark which is invisible for a human eye. However there is rather large number of the harmful influences capable to destroy the watermark which is embedded into the still image. The most widespread attack is JPEG compression that is caused by efficiency of this format of compression and its big prevalence on the Internet.The new algorithm which is modification of algorithm of Elham is presented in the present article. The algorithm of digital marking of motionless images carries out embedding of a watermark in frequency coefficients of discrete Hadamard transform of the chosen image blocks. The choice of blocks of the image for embedding of a digital watermark is carried out on the basis of the set threshold of entropy of pixels. The choice of low-frequency coefficients for embedding is carried out on the basis of comparison of values of coefficients of discrete cosine transformation with a predetermined threshold, depending on the product of the built-in watermark coefficient on change coefficient.Resistance of new algorithm to compression of JPEG, noising, filtration, change of color, the size and histogram equalization is in details analysed. Research of algorithm consists in comparison of the appearance taken from the damaged image of a watermark with the introduced logo. Ability of algorithm to embedding of a watermark with a minimum level of distortions of the image is in addition analysed. It is established that the new algorithm in comparison by initial algorithm of Elham showed full resistance to compression of JPEG, and also the improved resistance to a noising, change of brightness and histogram equalization.The developed algorithm can be used for copyright protection on the static images. Further studies will be used to study the

  10. Simultaneous optical image compression and encryption using error-reduction phase retrieval algorithm

    International Nuclear Information System (INIS)

    Liu, Wei; Liu, Shutian; Liu, Zhengjun

    2015-01-01

    We report a simultaneous image compression and encryption scheme based on solving a typical optical inverse problem. The secret images to be processed are multiplexed as the input intensities of a cascaded diffractive optical system. At the output plane, a compressed complex-valued data with a lot fewer measurements can be obtained by utilizing error-reduction phase retrieval algorithm. The magnitude of the output image can serve as the final ciphertext while its phase serves as the decryption key. Therefore the compression and encryption are simultaneously completed without additional encoding and filtering operations. The proposed strategy can be straightforwardly applied to the existing optical security systems that involve diffraction and interference. Numerical simulations are performed to demonstrate the validity and security of the proposal. (paper)

  11. A new chest compression depth feedback algorithm for high-quality CPR based on smartphone.

    Science.gov (United States)

    Song, Yeongtak; Oh, Jaehoon; Chee, Youngjoon

    2015-01-01

    Although many smartphone application (app) programs provide education and guidance for basic life support, they do not commonly provide feedback on the chest compression depth (CCD) and rate. The validation of its accuracy has not been reported to date. This study was a feasibility assessment of use of the smartphone as a CCD feedback device. In this study, we proposed the concept of a new real-time CCD estimation algorithm using a smartphone and evaluated the accuracy of the algorithm. Using the double integration of the acceleration signal, which was obtained from the accelerometer in the smartphone, we estimated the CCD in real time. Based on its periodicity, we removed the bias error from the accelerometer. To evaluate this instrument's accuracy, we used a potentiometer as the reference depth measurement. The evaluation experiments included three levels of CCD (insufficient, adequate, and excessive) and four types of grasping orientations with various compression directions. We used the difference between the reference measurement and the estimated depth as the error. The error was calculated for each compression. When chest compressions were performed with adequate depth for the patient who was lying on a flat floor, the mean (standard deviation) of the errors was 1.43 (1.00) mm. When the patient was lying on an oblique floor, the mean (standard deviation) of the errors was 3.13 (1.88) mm. The error of the CCD estimation was tolerable for the algorithm to be used in the smartphone-based CCD feedback app to compress more than 51 mm, which is the 2010 American Heart Association guideline.

  12. ITERATION FREE FRACTAL COMPRESSION USING GENETIC ALGORITHM FOR STILL COLOUR IMAGES

    Directory of Open Access Journals (Sweden)

    A.R. Nadira Banu Kamal

    2014-02-01

    Full Text Available The storage requirements for images can be excessive, if true color and a high-perceived image quality are desired. An RGB image may be viewed as a stack of three gray-scale images that when fed into the red, green and blue inputs of a color monitor, produce a color image on the screen. The abnormal size of many images leads to long, costly, transmission times. Hence, an iteration free fractal algorithm is proposed in this research paper to design an efficient search of the domain pools for colour image compression using Genetic Algorithm (GA. The proposed methodology reduces the coding process time and intensive computation tasks. Parameters such as image quality, compression ratio and coding time are analyzed. It is observed that the proposed method achieves excellent performance in image quality with reduction in storage space.

  13. An Online Dictionary Learning-Based Compressive Data Gathering Algorithm in Wireless Sensor Networks.

    Science.gov (United States)

    Wang, Donghao; Wan, Jiangwen; Chen, Junying; Zhang, Qiang

    2016-09-22

    To adapt to sense signals of enormous diversities and dynamics, and to decrease the reconstruction errors caused by ambient noise, a novel online dictionary learning method-based compressive data gathering (ODL-CDG) algorithm is proposed. The proposed dictionary is learned from a two-stage iterative procedure, alternately changing between a sparse coding step and a dictionary update step. The self-coherence of the learned dictionary is introduced as a penalty term during the dictionary update procedure. The dictionary is also constrained with sparse structure. It's theoretically demonstrated that the sensing matrix satisfies the restricted isometry property (RIP) with high probability. In addition, the lower bound of necessary number of measurements for compressive sensing (CS) reconstruction is given. Simulation results show that the proposed ODL-CDG algorithm can enhance the recovery accuracy in the presence of noise, and reduce the energy consumption in comparison with other dictionary based data gathering methods.

  14. An Online Dictionary Learning-Based Compressive Data Gathering Algorithm in Wireless Sensor Networks

    Directory of Open Access Journals (Sweden)

    Donghao Wang

    2016-09-01

    Full Text Available To adapt to sense signals of enormous diversities and dynamics, and to decrease the reconstruction errors caused by ambient noise, a novel online dictionary learning method-based compressive data gathering (ODL-CDG algorithm is proposed. The proposed dictionary is learned from a two-stage iterative procedure, alternately changing between a sparse coding step and a dictionary update step. The self-coherence of the learned dictionary is introduced as a penalty term during the dictionary update procedure. The dictionary is also constrained with sparse structure. It’s theoretically demonstrated that the sensing matrix satisfies the restricted isometry property (RIP with high probability. In addition, the lower bound of necessary number of measurements for compressive sensing (CS reconstruction is given. Simulation results show that the proposed ODL-CDG algorithm can enhance the recovery accuracy in the presence of noise, and reduce the energy consumption in comparison with other dictionary based data gathering methods.

  15. Novel prediction- and subblock-based algorithm for fractal image compression

    International Nuclear Information System (INIS)

    Chung, K.-L.; Hsu, C.-H.

    2006-01-01

    Fractal encoding is the most consuming part in fractal image compression. In this paper, a novel two-phase prediction- and subblock-based fractal encoding algorithm is presented. Initially the original gray image is partitioned into a set of variable-size blocks according to the S-tree- and interpolation-based decomposition principle. In the first phase, each current block of variable-size range block tries to find the best matched domain block based on the proposed prediction-based search strategy which utilizes the relevant neighboring variable-size domain blocks. The first phase leads to a significant computation-saving effect. If the domain block found within the predicted search space is unacceptable, in the second phase, a subblock strategy is employed to partition the current variable-size range block into smaller blocks to improve the image quality. Experimental results show that our proposed prediction- and subblock-based fractal encoding algorithm outperforms the conventional full search algorithm and the recently published spatial-correlation-based algorithm by Truong et al. in terms of encoding time and image quality. In addition, the performance comparison among our proposed algorithm and the other two algorithms, the no search-based algorithm and the quadtree-based algorithm, are also investigated

  16. A new approach to pre-processing digital image for wavelet-based watermark

    Science.gov (United States)

    Agreste, Santa; Andaloro, Guido

    2008-11-01

    The growth of the Internet has increased the phenomenon of digital piracy, in multimedia objects, like software, image, video, audio and text. Therefore it is strategic to individualize and to develop methods and numerical algorithms, which are stable and have low computational cost, that will allow us to find a solution to these problems. We describe a digital watermarking algorithm for color image protection and authenticity: robust, not blind, and wavelet-based. The use of Discrete Wavelet Transform is motivated by good time-frequency features and a good match with Human Visual System directives. These two combined elements are important for building an invisible and robust watermark. Moreover our algorithm can work with any image, thanks to the step of pre-processing of the image that includes resize techniques that adapt to the size of the original image for Wavelet transform. The watermark signal is calculated in correlation with the image features and statistic properties. In the detection step we apply a re-synchronization between the original and watermarked image according to the Neyman-Pearson statistic criterion. Experimentation on a large set of different images has been shown to be resistant against geometric, filtering, and StirMark attacks with a low rate of false alarm.

  17. CPAC: Energy-Efficient Data Collection through Adaptive Selection of Compression Algorithms for Sensor Networks

    Science.gov (United States)

    Lee, HyungJune; Kim, HyunSeok; Chang, Ik Joon

    2014-01-01

    We propose a technique to optimize the energy efficiency of data collection in sensor networks by exploiting a selective data compression. To achieve such an aim, we need to make optimal decisions regarding two aspects: (1) which sensor nodes should execute compression; and (2) which compression algorithm should be used by the selected sensor nodes. We formulate this problem into binary integer programs, which provide an energy-optimal solution under the given latency constraint. Our simulation results show that the optimization algorithm significantly reduces the overall network-wide energy consumption for data collection. In the environment having a stationary sink from stationary sensor nodes, the optimized data collection shows 47% energy savings compared to the state-of-the-art collection protocol (CTP). More importantly, we demonstrate that our optimized data collection provides the best performance in an intermittent network under high interference. In such networks, we found that the selective compression for frequent packet retransmissions saves up to 55% energy compared to the best known protocol. PMID:24721763

  18. Near-lossless multichannel EEG compression based on matrix and tensor decompositions.

    Science.gov (United States)

    Dauwels, Justin; Srinivasan, K; Reddy, M Ramasubba; Cichocki, Andrzej

    2013-05-01

    A novel near-lossless compression algorithm for multichannel electroencephalogram (MC-EEG) is proposed based on matrix/tensor decomposition models. MC-EEG is represented in suitable multiway (multidimensional) forms to efficiently exploit temporal and spatial correlations simultaneously. Several matrix/tensor decomposition models are analyzed in view of efficient decorrelation of the multiway forms of MC-EEG. A compression algorithm is built based on the principle of “lossy plus residual coding,” consisting of a matrix/tensor decomposition-based coder in the lossy layer followed by arithmetic coding in the residual layer. This approach guarantees a specifiable maximum absolute error between original and reconstructed signals. The compression algorithm is applied to three different scalp EEG datasets and an intracranial EEG dataset, each with different sampling rate and resolution. The proposed algorithm achieves attractive compression ratios compared to compressing individual channels separately. For similar compression ratios, the proposed algorithm achieves nearly fivefold lower average error compared to a similar wavelet-based volumetric MC-EEG compression algorithm.

  19. MEDICAL IMAGE COMPRESSION USING HYBRID CODER WITH FUZZY EDGE DETECTION

    Directory of Open Access Journals (Sweden)

    K. Vidhya

    2011-02-01

    Full Text Available Medical imaging techniques produce prohibitive amounts of digitized clinical data. Compression of medical images is a must due to large memory space required for transmission and storage. This paper presents an effective algorithm to compress and to reconstruct medical images. The proposed algorithm first extracts edge information of medical images by using fuzzy edge detector. The images are decomposed using Cohen-Daubechies-Feauveau (CDF wavelet. The hybrid technique utilizes the efficient wavelet based compression algorithms such as JPEG2000 and Set Partitioning In Hierarchical Trees (SPIHT. The wavelet coefficients in the approximation sub band are encoded using tier 1 part of JPEG2000. The wavelet coefficients in the detailed sub bands are encoded using SPIHT. Consistent quality images are produced by this method at a lower bit rate compared to other standard compression algorithms. Two main approaches to assess image quality are objective testing and subjective testing. The image quality is evaluated by objective quality measures. Objective measures correlate well with the perceived image quality for the proposed compression algorithm.

  20. Effects of image compression and degradation on an automatic diabetic retinopathy screening algorithm

    Science.gov (United States)

    Agurto, C.; Barriga, S.; Murray, V.; Pattichis, M.; Soliz, P.

    2010-03-01

    Diabetic retinopathy (DR) is one of the leading causes of blindness among adult Americans. Automatic methods for detection of the disease have been developed in recent years, most of them addressing the segmentation of bright and red lesions. In this paper we present an automatic DR screening system that does approach the problem through the segmentation of features. The algorithm determines non-diseased retinal images from those with pathology based on textural features obtained using multiscale Amplitude Modulation-Frequency Modulation (AM-FM) decompositions. The decomposition is represented as features that are the inputs to a classifier. The algorithm achieves 0.88 area under the ROC curve (AROC) for a set of 280 images from the MESSIDOR database. The algorithm is then used to analyze the effects of image compression and degradation, which will be present in most actual clinical or screening environments. Results show that the algorithm is insensitive to illumination variations, but high rates of compression and large blurring effects degrade its performance.

  1. An Algorithm to Compress Line-transition Data for Radiative-transfer Calculations

    Science.gov (United States)

    Cubillos, Patricio E.

    2017-11-01

    Molecular line-transition lists are an essential ingredient for radiative-transfer calculations. With recent databases now surpassing the billion-line mark, handling them has become computationally prohibitive, due to both the required processing power and memory. Here I present a temperature-dependent algorithm to separate strong from weak line transitions, reformatting the large majority of the weaker lines into a cross-section data file, and retaining the detailed line-by-line information of the fewer strong lines. For any given molecule over the 0.3-30 μm range, this algorithm reduces the number of lines to a few million, enabling faster radiative-transfer computations without a significant loss of information. The final compression rate depends on how densely populated the spectrum is. I validate this algorithm by comparing Exomol’s HCN extinction-coefficient spectra between the complete (65 million line transitions) and compressed (7.7 million) line lists. Over the 0.6-33 μm range, the average difference between extinction-coefficient values is less than 1%. A Python/C implementation of this algorithm is open-source and available at https://github.com/pcubillos/repack. So far, this code handles the Exomol and HITRAN line-transition format.

  2. Wavelet Based Hilbert Transform with Digital Design and Application to QCM-SS Watermarking

    Directory of Open Access Journals (Sweden)

    S. P. Maity

    2008-04-01

    Full Text Available In recent time, wavelet transforms are used extensively for efficient storage, transmission and representation of multimedia signals. Hilbert transform pairs of wavelets is the basic unit of many wavelet theories such as complex filter banks, complex wavelet and phaselet etc. Moreover, Hilbert transform finds various applications in communications and signal processing such as generation of single sideband (SSB modulation, quadrature carrier multiplexing (QCM and bandpass representation of a signal. Thus wavelet based discrete Hilbert transform design draws much attention of researchers for couple of years. This paper proposes an (i algorithm for generation of low computation cost Hilbert transform pairs of symmetric filter coefficients using biorthogonal wavelets, (ii approximation to its rational coefficients form for its efficient hardware realization and without much loss in signal representation, and finally (iii development of QCM-SS (spread spectrum image watermarking scheme for doubling the payload capacity. Simulation results show novelty of the proposed Hilbert transform design and its application to watermarking compared to existing algorithms.

  3. Supplementary Material for: Compressing an Ensemble With Statistical Models: An Algorithm for Global 3D Spatio-Temporal Temperature

    KAUST Repository

    Castruccio, Stefano; Genton, Marc G.

    2016-01-01

    algorithms can be used to mitigate this problem, but since they are designed to compress generic scientific datasets, they do not account for the nature of climate model output and they compress only individual simulations. In this work, we propose a

  4. A compressed sensing based 3D resistivity inversion algorithm for hydrogeological applications

    Science.gov (United States)

    Ranjan, Shashi; Kambhammettu, B. V. N. P.; Peddinti, Srinivasa Rao; Adinarayana, J.

    2018-04-01

    Image reconstruction from discrete electrical responses pose a number of computational and mathematical challenges. Application of smoothness constrained regularized inversion from limited measurements may fail to detect resistivity anomalies and sharp interfaces separated by hydro stratigraphic units. Under favourable conditions, compressed sensing (CS) can be thought of an alternative to reconstruct the image features by finding sparse solutions to highly underdetermined linear systems. This paper deals with the development of a CS assisted, 3-D resistivity inversion algorithm for use with hydrogeologists and groundwater scientists. CS based l1-regularized least square algorithm was applied to solve the resistivity inversion problem. Sparseness in the model update vector is introduced through block oriented discrete cosine transformation, with recovery of the signal achieved through convex optimization. The equivalent quadratic program was solved using primal-dual interior point method. Applicability of the proposed algorithm was demonstrated using synthetic and field examples drawn from hydrogeology. The proposed algorithm has outperformed the conventional (smoothness constrained) least square method in recovering the model parameters with much fewer data, yet preserving the sharp resistivity fronts separated by geologic layers. Resistivity anomalies represented by discrete homogeneous blocks embedded in contrasting geologic layers were better imaged using the proposed algorithm. In comparison to conventional algorithm, CS has resulted in an efficient (an increase in R2 from 0.62 to 0.78; a decrease in RMSE from 125.14 Ω-m to 72.46 Ω-m), reliable, and fast converging (run time decreased by about 25%) solution.

  5. Wavelet-based characterization of gait signal for neurological abnormalities.

    Science.gov (United States)

    Baratin, E; Sugavaneswaran, L; Umapathy, K; Ioana, C; Krishnan, S

    2015-02-01

    Studies conducted by the World Health Organization (WHO) indicate that over one billion suffer from neurological disorders worldwide, and lack of efficient diagnosis procedures affects their therapeutic interventions. Characterizing certain pathologies of motor control for facilitating their diagnosis can be useful in quantitatively monitoring disease progression and efficient treatment planning. As a suitable directive, we introduce a wavelet-based scheme for effective characterization of gait associated with certain neurological disorders. In addition, since the data were recorded from a dynamic process, this work also investigates the need for gait signal re-sampling prior to identification of signal markers in the presence of pathologies. To benefit automated discrimination of gait data, certain characteristic features are extracted from the wavelet-transformed signals. The performance of the proposed approach was evaluated using a database consisting of 15 Parkinson's disease (PD), 20 Huntington's disease (HD), 13 Amyotrophic lateral sclerosis (ALS) and 16 healthy control subjects, and an average classification accuracy of 85% is achieved using an unbiased cross-validation strategy. The obtained results demonstrate the potential of the proposed methodology for computer-aided diagnosis and automatic characterization of certain neurological disorders. Copyright © 2015 Elsevier B.V. All rights reserved.

  6. A nonlinear relaxation/quasi-Newton algorithm for the compressible Navier-Stokes equations

    Science.gov (United States)

    Edwards, Jack R.; Mcrae, D. S.

    1992-01-01

    A highly efficient implicit method for the computation of steady, two-dimensional compressible Navier-Stokes flowfields is presented. The discretization of the governing equations is hybrid in nature, with flux-vector splitting utilized in the streamwise direction and central differences with flux-limited artificial dissipation used for the transverse fluxes. Line Jacobi relaxation is used to provide a suitable initial guess for a new nonlinear iteration strategy based on line Gauss-Seidel sweeps. The applicability of quasi-Newton methods as convergence accelerators for this and other line relaxation algorithms is discussed, and efficient implementations of such techniques are presented. Convergence histories and comparisons with experimental data are presented for supersonic flow over a flat plate and for several high-speed compression corner interactions. Results indicate a marked improvement in computational efficiency over more conventional upwind relaxation strategies, particularly for flowfields containing large pockets of streamwise subsonic flow.

  7. High Order Wavelet-Based Multiresolution Technology for Airframe Noise Prediction, Phase II

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to develop a novel, high-accuracy, high-fidelity, multiresolution (MRES), wavelet-based framework for efficient prediction of airframe noise sources and...

  8. Wavelet-Based Bayesian Methods for Image Analysis and Automatic Target Recognition

    National Research Council Canada - National Science Library

    Nowak, Robert

    2001-01-01

    .... We have developed two new techniques. First, we have develop a wavelet-based approach to image restoration and deconvolution problems using Bayesian image models and an alternating-maximation method...

  9. Incorporation of local dependent reliability information into the Prior Image Constrained Compressed Sensing (PICCS) reconstruction algorithm

    International Nuclear Information System (INIS)

    Vaegler, Sven; Sauer, Otto; Stsepankou, Dzmitry; Hesser, Juergen

    2015-01-01

    The reduction of dose in cone beam computer tomography (CBCT) arises from the decrease of the tube current for each projection as well as from the reduction of the number of projections. In order to maintain good image quality, sophisticated image reconstruction techniques are required. The Prior Image Constrained Compressed Sensing (PICCS) incorporates prior images into the reconstruction algorithm and outperforms the widespread used Feldkamp-Davis-Kress-algorithm (FDK) when the number of projections is reduced. However, prior images that contain major variations are not appropriately considered so far in PICCS. We therefore propose the partial-PICCS (pPICCS) algorithm. This framework is a problem-specific extension of PICCS and enables the incorporation of the reliability of the prior images additionally. We assumed that the prior images are composed of areas with large and small deviations. Accordingly, a weighting matrix considered the assigned areas in the objective function. We applied our algorithm to the problem of image reconstruction from few views by simulations with a computer phantom as well as on clinical CBCT projections from a head-and-neck case. All prior images contained large local variations. The reconstructed images were compared to the reconstruction results by the FDK-algorithm, by Compressed Sensing (CS) and by PICCS. To show the gain of image quality we compared image details with the reference image and used quantitative metrics (root-mean-square error (RMSE), contrast-to-noise-ratio (CNR)). The pPICCS reconstruction framework yield images with substantially improved quality even when the number of projections was very small. The images contained less streaking, blurring and inaccurately reconstructed structures compared to the images reconstructed by FDK, CS and conventional PICCS. The increased image quality is also reflected in large RMSE differences. We proposed a modification of the original PICCS algorithm. The pPICCS algorithm

  10. An optimized compression algorithm for real-time ECG data transmission in wireless network of medical information systems.

    Science.gov (United States)

    Cho, Gyoun-Yon; Lee, Seo-Joon; Lee, Tae-Ro

    2015-01-01

    Recent medical information systems are striving towards real-time monitoring models to care patients anytime and anywhere through ECG signals. However, there are several limitations such as data distortion and limited bandwidth in wireless communications. In order to overcome such limitations, this research focuses on compression. Few researches have been made to develop a specialized compression algorithm for ECG data transmission in real-time monitoring wireless network. Not only that, recent researches' algorithm is not appropriate for ECG signals. Therefore this paper presents a more developed algorithm EDLZW for efficient ECG data transmission. Results actually showed that the EDLZW compression ratio was 8.66, which was a performance that was 4 times better than any other recent compression method widely used today.

  11. Effect of JPEG2000 mammogram compression on microcalcifications segmentation

    International Nuclear Information System (INIS)

    Georgiev, V.; Arikidis, N.; Karahaliou, A.; Skiadopoulos, S.; Costaridou, L.

    2012-01-01

    The purpose of this study is to investigate the effect of mammographic image compression on the automated segmentation of individual microcalcifications. The dataset consisted of individual microcalcifications of 105 clusters originating from mammograms of the Digital Database for Screening Mammography. A JPEG2000 wavelet-based compression algorithm was used for compressing mammograms at 7 compression ratios (CRs): 10:1, 20:1, 30:1, 40:1, 50:1, 70:1 and 100:1. A gradient-based active contours segmentation algorithm was employed for segmentation of microcalcifications as depicted on original and compressed mammograms. The performance of the microcalcification segmentation algorithm on original and compressed mammograms was evaluated by means of the area overlap measure (AOM) and distance differentiation metrics (d mean and d max ) by comparing automatically derived microcalcification borders to manually defined ones by an expert radiologist. The AOM monotonically decreased as CR increased, while d mean and d max metrics monotonically increased with CR increase. The performance of the segmentation algorithm on original mammograms was (mean±standard deviation): AOM=0.91±0.08, d mean =0.06±0.05 and d max =0.45±0.20, while on 40:1 compressed images the algorithm's performance was: AOM=0.69±0.15, d mean =0.23±0.13 and d max =0.92±0.39. Mammographic image compression deteriorates the performance of the segmentation algorithm, influencing the quantification of individual microcalcification morphological properties and subsequently affecting computer aided diagnosis of microcalcification clusters. (authors)

  12. Wavelet based artificial neural network applied for energy efficiency enhancement of decoupled HVAC system

    International Nuclear Information System (INIS)

    Jahedi, G.; Ardehali, M.M.

    2012-01-01

    Highlights: ► In HVAC systems, temperature and relative humidity are coupled and dynamic mathematical models are non-linear. ► A wavelet-based ANN is used in series with an infinite impulse response filter for self tuning of PD controller. ► Energy consumption is evaluated for a decoupled bi-linear HVAC system with variable air volume and variable water flow. ► Substantial enhancement in energy efficiency is realized, when the gain coefficients of PD controllers are tuned adaptively. - Abstract: Control methodologies could lower energy demand and consumption of heating, ventilating and air conditioning (HVAC) systems and, simultaneously, achieve better comfort conditions. However, the application of classical controllers is unsatisfactory as HVAC systems are non-linear and the control variables such as temperature and relative humidity (RH) inside the thermal zone are coupled. The objective of this study is to develop and simulate a wavelet-based artificial neural network (WNN) for self tuning of a proportional-derivative (PD) controller for a decoupled bi-linear HVAC system with variable air volume and variable water flow responsible for controlling temperature and RH of a thermal zone, where thermal comfort and energy consumption of the system are evaluated. To achieve the objective, a WNN is used in series with an infinite impulse response (IIR) filter for faster and more accurate identification of system dynamics, as needed for on-line use and off-line batch mode training. The WNN-IIR algorithm is used for self-tuning of two PD controllers for temperature and RH. The simulation results show that the WNN-IIR controller performance is superior, as compared with classical PD controller. The enhancement in efficiency of the HVAC system is accomplished due to substantially lower consumption of energy during the transient operation, when the gain coefficients of PD controllers are tuned in an adaptive manner, as the steady state setpoints for temperature and

  13. Wavelet-based unsupervised learning method for electrocardiogram suppression in surface electromyograms.

    Science.gov (United States)

    Niegowski, Maciej; Zivanovic, Miroslav

    2016-03-01

    We present a novel approach aimed at removing electrocardiogram (ECG) perturbation from single-channel surface electromyogram (EMG) recordings by means of unsupervised learning of wavelet-based intensity images. The general idea is to combine the suitability of certain wavelet decomposition bases which provide sparse electrocardiogram time-frequency representations, with the capacity of non-negative matrix factorization (NMF) for extracting patterns from images. In order to overcome convergence problems which often arise in NMF-related applications, we design a novel robust initialization strategy which ensures proper signal decomposition in a wide range of ECG contamination levels. Moreover, the method can be readily used because no a priori knowledge or parameter adjustment is needed. The proposed method was evaluated on real surface EMG signals against two state-of-the-art unsupervised learning algorithms and a singular spectrum analysis based method. The results, expressed in terms of high-to-low energy ratio, normalized median frequency, spectral power difference and normalized average rectified value, suggest that the proposed method enables better ECG-EMG separation quality than the reference methods. Copyright © 2015 IPEM. Published by Elsevier Ltd. All rights reserved.

  14. Compressing an Ensemble with Statistical Models: An Algorithm for Global 3D Spatio-Temporal Temperature

    KAUST Repository

    Castruccio, Stefano

    2015-04-02

    One of the main challenges when working with modern climate model ensembles is the increasingly larger size of the data produced, and the consequent difficulty in storing large amounts of spatio-temporally resolved information. Many compression algorithms can be used to mitigate this problem, but since they are designed to compress generic scientific data sets, they do not account for the nature of climate model output and they compress only individual simulations. In this work, we propose a different, statistics-based approach that explicitly accounts for the space-time dependence of the data for annual global three-dimensional temperature fields in an initial condition ensemble. The set of estimated parameters is small (compared to the data size) and can be regarded as a summary of the essential structure of the ensemble output; therefore, it can be used to instantaneously reproduce the temperature fields in an ensemble with a substantial saving in storage and time. The statistical model exploits the gridded geometry of the data and parallelization across processors. It is therefore computationally convenient and allows to fit a non-trivial model to a data set of one billion data points with a covariance matrix comprising of 10^18 entries.

  15. Compressing an Ensemble with Statistical Models: An Algorithm for Global 3D Spatio-Temporal Temperature

    KAUST Repository

    Castruccio, Stefano; Genton, Marc G.

    2015-01-01

    One of the main challenges when working with modern climate model ensembles is the increasingly larger size of the data produced, and the consequent difficulty in storing large amounts of spatio-temporally resolved information. Many compression algorithms can be used to mitigate this problem, but since they are designed to compress generic scientific data sets, they do not account for the nature of climate model output and they compress only individual simulations. In this work, we propose a different, statistics-based approach that explicitly accounts for the space-time dependence of the data for annual global three-dimensional temperature fields in an initial condition ensemble. The set of estimated parameters is small (compared to the data size) and can be regarded as a summary of the essential structure of the ensemble output; therefore, it can be used to instantaneously reproduce the temperature fields in an ensemble with a substantial saving in storage and time. The statistical model exploits the gridded geometry of the data and parallelization across processors. It is therefore computationally convenient and allows to fit a non-trivial model to a data set of one billion data points with a covariance matrix comprising of 10^18 entries.

  16. Scalable Atomistic Simulation Algorithms for Materials Research

    Directory of Open Access Journals (Sweden)

    Aiichiro Nakano

    2002-01-01

    Full Text Available A suite of scalable atomistic simulation programs has been developed for materials research based on space-time multiresolution algorithms. Design and analysis of parallel algorithms are presented for molecular dynamics (MD simulations and quantum-mechanical (QM calculations based on the density functional theory. Performance tests have been carried out on 1,088-processor Cray T3E and 1,280-processor IBM SP3 computers. The linear-scaling algorithms have enabled 6.44-billion-atom MD and 111,000-atom QM calculations on 1,024 SP3 processors with parallel efficiency well over 90%. production-quality programs also feature wavelet-based computational-space decomposition for adaptive load balancing, spacefilling-curve-based adaptive data compression with user-defined error bound for scalable I/O, and octree-based fast visibility culling for immersive and interactive visualization of massive simulation data.

  17. A rapid compression technique for 4-D functional MRI images using data rearrangement and modified binary array techniques.

    Science.gov (United States)

    Uma Vetri Selvi, G; Nadarajan, R

    2015-12-01

    Compression techniques are vital for efficient storage and fast transfer of medical image data. The existing compression techniques take significant amount of time for performing encoding and decoding and hence the purpose of compression is not fully satisfied. In this paper a rapid 4-D lossy compression method constructed using data rearrangement, wavelet-based contourlet transformation and a modified binary array technique has been proposed for functional magnetic resonance imaging (fMRI) images. In the proposed method, the image slices of fMRI data are rearranged so that the redundant slices form a sequence. The image sequence is then divided into slices and transformed using wavelet-based contourlet transform (WBCT). In WBCT, the high frequency sub-band obtained from wavelet transform is further decomposed into multiple directional sub-bands by directional filter bank to obtain more directional information. The relationship between the coefficients has been changed in WBCT as it has more directions. The differences in parent–child relationships are handled by a repositioning algorithm. The repositioned coefficients are then subjected to quantization. The quantized coefficients are further compressed by modified binary array technique where the most frequently occurring value of a sequence is coded only once. The proposed method has been experimented with fMRI images the results indicated that the processing time of the proposed method is less compared to existing wavelet-based set partitioning in hierarchical trees and set partitioning embedded block coder (SPECK) compression schemes [1]. The proposed method could also yield a better compression performance compared to wavelet-based SPECK coder. The objective results showed that the proposed method could gain good compression ratio in maintaining a peak signal noise ratio value of above 70 for all the experimented sequences. The SSIM value is equal to 1 and the value of CC is greater than 0.9 for all

  18. Study on data compression algorithm and its implementation in portable electronic device for Internet of Things applications

    Directory of Open Access Journals (Sweden)

    Khairi Nor Asilah

    2017-01-01

    Full Text Available An Internet of Things (IoT device is usually powered by a small battery, which does not last long. As a result, saving energy in IoT devices has become an important issue when it comes to this subject. Since power consumption is the primary cause of radio communication, some researchers have proposed several compression algorithms with the purpose of overcoming this particular problem. Several data compression algorithms from previous reference papers are discussed in this paper. The description of the compression algorithm in the reference papers was collected and summarized in a table form. From the analysis, MAS compression algorithm was selected as a project prototype due to its high potential for meeting the project requirements. Besides that, it also produced better performance regarding energy-saving, better memory usage, and data transmission efficiency. This method is also suitable to be implemented in WSN. MAS compression algorithm will be prototyped and applied in portable electronic devices for Internet of Things applications.

  19. Study on data compression algorithm and its implementation in portable electronic device for Internet of Things applications

    Science.gov (United States)

    Asilah Khairi, Nor; Bahari Jambek, Asral

    2017-11-01

    An Internet of Things (IoT) device is usually powered by a small battery, which does not last long. As a result, saving energy in IoT devices has become an important issue when it comes to this subject. Since power consumption is the primary cause of radio communication, some researchers have proposed several compression algorithms with the purpose of overcoming this particular problem. Several data compression algorithms from previous reference papers are discussed in this paper. The description of the compression algorithm in the reference papers was collected and summarized in a table form. From the analysis, MAS compression algorithm was selected as a project prototype due to its high potential for meeting the project requirements. Besides that, it also produced better performance regarding energy-saving, better memory usage, and data transmission efficiency. This method is also suitable to be implemented in WSN. MAS compression algorithm will be prototyped and applied in portable electronic devices for Internet of Things applications.

  20. Wavelet-based Adaptive Mesh Refinement Method for Global Atmospheric Chemical Transport Modeling

    Science.gov (United States)

    Rastigejev, Y.

    2011-12-01

    Numerical modeling of global atmospheric chemical transport presents enormous computational difficulties, associated with simulating a wide range of time and spatial scales. The described difficulties are exacerbated by the fact that hundreds of chemical species and thousands of chemical reactions typically are used for chemical kinetic mechanism description. These computational requirements very often forces researches to use relatively crude quasi-uniform numerical grids with inadequate spatial resolution that introduces significant numerical diffusion into the system. It was shown that this spurious diffusion significantly distorts the pollutant mixing and transport dynamics for typically used grid resolution. The described numerical difficulties have to be systematically addressed considering that the demand for fast, high-resolution chemical transport models will be exacerbated over the next decade by the need to interpret satellite observations of tropospheric ozone and related species. In this study we offer dynamically adaptive multilevel Wavelet-based Adaptive Mesh Refinement (WAMR) method for numerical modeling of atmospheric chemical evolution equations. The adaptive mesh refinement is performed by adding and removing finer levels of resolution in the locations of fine scale development and in the locations of smooth solution behavior accordingly. The algorithm is based on the mathematically well established wavelet theory. This allows us to provide error estimates of the solution that are used in conjunction with an appropriate threshold criteria to adapt the non-uniform grid. Other essential features of the numerical algorithm include: an efficient wavelet spatial discretization that allows to minimize the number of degrees of freedom for a prescribed accuracy, a fast algorithm for computing wavelet amplitudes, and efficient and accurate derivative approximations on an irregular grid. The method has been tested for a variety of benchmark problems

  1. Image Steganography of Multiple File Types with Encryption and Compression Algorithms

    Directory of Open Access Journals (Sweden)

    Ernest Andreigh C. Centina

    2017-05-01

    Full Text Available The goals of this study were to develop a system intended for securing files through the technique of image steganography integrated with cryptography by utilizing ZLIB Algorithm for compressing and decompressing secret files, DES Algorithm for encryption and decryption, and Least Significant Bit Algorithm for file embedding and extraction to avoid compromise on highly confidential files from exploits of unauthorized persons. Ensuing to this, the system is in acc ordance with ISO 9126 international quality standards. Every quality criteria of the system was evaluated by 10 Information Technology professionals, and the arithmetic Mean and Standard Deviation of the survey were computed. The result exhibits that m ost of them strongly agreed that the system is excellently effective based on Functionality, Reliability, Usability, Efficiency, Maintainability and Portability conformance to ISO 9126 standards. The system was found to be a useful tool for both governmen t agencies and private institutions for it could keep not only the message secret but also the existence of that particular message or file et maintaining the privacy of highly confidential and sensitive files from unauthorized access.

  2. Low-Cost Super-Resolution Algorithms Implementation Over a HW/SW Video Compression Platform

    Directory of Open Access Journals (Sweden)

    Llopis Rafael Peset

    2006-01-01

    Full Text Available Two approaches are presented in this paper to improve the quality of digital images over the sensor resolution using super-resolution techniques: iterative super-resolution (ISR and noniterative super-resolution (NISR algorithms. The results show important improvements in the image quality, assuming that sufficient sample data and a reasonable amount of aliasing are available at the input images. These super-resolution algorithms have been implemented over a codesign video compression platform developed by Philips Research, performing minimal changes on the overall hardware architecture. In this way, a novel and feasible low-cost implementation has been obtained by using the resources encountered in a generic hybrid video encoder. Although a specific video codec platform has been used, the methodology presented in this paper is easily extendable to any other video encoder architectures. Finally a comparison in terms of memory, computational load, and image quality for both algorithms, as well as some general statements about the final impact of the sampling process on the quality of the super-resolved (SR image, are also presented.

  3. Value-at-risk estimation with wavelet-based extreme value theory: Evidence from emerging markets

    Science.gov (United States)

    Cifter, Atilla

    2011-06-01

    This paper introduces wavelet-based extreme value theory (EVT) for univariate value-at-risk estimation. Wavelets and EVT are combined for volatility forecasting to estimate a hybrid model. In the first stage, wavelets are used as a threshold in generalized Pareto distribution, and in the second stage, EVT is applied with a wavelet-based threshold. This new model is applied to two major emerging stock markets: the Istanbul Stock Exchange (ISE) and the Budapest Stock Exchange (BUX). The relative performance of wavelet-based EVT is benchmarked against the Riskmetrics-EWMA, ARMA-GARCH, generalized Pareto distribution, and conditional generalized Pareto distribution models. The empirical results show that the wavelet-based extreme value theory increases predictive performance of financial forecasting according to number of violations and tail-loss tests. The superior forecasting performance of the wavelet-based EVT model is also consistent with Basel II requirements, and this new model can be used by financial institutions as well.

  4. PERFORMANCE ANALYSIS OF SET PARTITIONING IN HIERARCHICAL TREES (SPIHT ALGORITHM FOR A FAMILY OF WAVELETS USED IN COLOR IMAGE COMPRESSION

    Directory of Open Access Journals (Sweden)

    A. Sreenivasa Murthy

    2014-11-01

    Full Text Available With the spurt in the amount of data (Image, video, audio, speech, & text available on the net, there is a huge demand for memory & bandwidth savings. One has to achieve this, by maintaining the quality & fidelity of the data acceptable to the end user. Wavelet transform is an important and practical tool for data compression. Set partitioning in hierarchal trees (SPIHT is a widely used compression algorithm for wavelet transformed images. Among all wavelet transform and zero-tree quantization based image compression algorithms SPIHT has become the benchmark state-of-the-art algorithm because it is simple to implement & yields good results. In this paper we present a comparative study of various wavelet families for image compression with SPIHT algorithm. We have conducted experiments with Daubechies, Coiflet, Symlet, Bi-orthogonal, Reverse Bi-orthogonal and Demeyer wavelet types. The resulting image quality is measured objectively, using peak signal-to-noise ratio (PSNR, and subjectively, using perceived image quality (human visual perception, HVP for short. The resulting reduction in the image size is quantified by compression ratio (CR.

  5. Dragonfly: an implementation of the expand-maximize-compress algorithm for single-particle imaging.

    Science.gov (United States)

    Ayyer, Kartik; Lan, Ti-Yen; Elser, Veit; Loh, N Duane

    2016-08-01

    Single-particle imaging (SPI) with X-ray free-electron lasers has the potential to change fundamentally how biomacromolecules are imaged. The structure would be derived from millions of diffraction patterns, each from a different copy of the macromolecule before it is torn apart by radiation damage. The challenges posed by the resultant data stream are staggering: millions of incomplete, noisy and un-oriented patterns have to be computationally assembled into a three-dimensional intensity map and then phase reconstructed. In this paper, the Dragonfly software package is described, based on a parallel implementation of the expand-maximize-compress reconstruction algorithm that is well suited for this task. Auxiliary modules to simulate SPI data streams are also included to assess the feasibility of proposed SPI experiments at the Linac Coherent Light Source, Stanford, California, USA.

  6. Surpassing the Theoretical 1-Norm Phase Transition in Compressive Sensing by Tuning the Smoothed L0 Algorithm

    DEFF Research Database (Denmark)

    Oxvig, Christian Schou; Pedersen, Patrick Steffen; Arildsen, Thomas

    2013-01-01

    Reconstruction of an undersampled signal is at the root of compressive sensing: when is an algorithm capable of reconstructing the signal? what quality is achievable? and how much time does reconstruction require? We have considered the worst-case performance of the smoothed ℓ0 norm reconstruction...... algorithm in a noiseless setup. Through an empirical tuning of its parameters, we have improved the phase transition (capabilities) of the algorithm for fixed quality and required time. In this paper, we present simulation results that show a phase transition surpassing that of the theoretical ℓ1 approach......: the proposed modified algorithm obtains 1-norm phase transition with greatly reduced required computation time....

  7. A Novel Object Tracking Algorithm Based on Compressed Sensing and Entropy of Information

    Directory of Open Access Journals (Sweden)

    Ding Ma

    2015-01-01

    Full Text Available Object tracking has always been a hot research topic in the field of computer vision; its purpose is to track objects with specific characteristics or representation and estimate the information of objects such as their locations, sizes, and rotation angles in the current frame. Object tracking in complex scenes will usually encounter various sorts of challenges, such as location change, dimension change, illumination change, perception change, and occlusion. This paper proposed a novel object tracking algorithm based on compressed sensing and information entropy to address these challenges. First, objects are characterized by the Haar (Haar-like and ORB features. Second, the dimensions of computation space of the Haar and ORB features are effectively reduced through compressed sensing. Then the above-mentioned features are fused based on information entropy. Finally, in the particle filter framework, an object location was obtained by selecting candidate object locations in the current frame from the local context neighboring the optimal locations in the last frame. Our extensive experimental results demonstrated that this method was able to effectively address the challenges of perception change, illumination change, and large area occlusion, which made it achieve better performance than existing approaches such as MIL and CT.

  8. Improvement of Secret Image Invisibility in Circulation Image with Dyadic Wavelet Based Data Hiding with Run-Length Coded Secret Images of Which Location of Codes are Determined with Random Number

    OpenAIRE

    Kohei Arai; Yuji Yamada

    2011-01-01

    An attempt is made for improvement of secret image invisibility in circulation images with dyadic wavelet based data hiding with run-length coded secret images of which location of codes are determined by random number. Through experiments, it is confirmed that secret images are almost invisible in circulation images. Also robustness of the proposed data hiding method against data compression of circulation images is discussed. Data hiding performance in terms of invisibility of secret images...

  9. Modeling of video traffic in packet networks, low rate video compression, and the development of a lossy+lossless image compression algorithm

    Science.gov (United States)

    Sayood, K.; Chen, Y. C.; Wang, X.

    1992-01-01

    During this reporting period we have worked on three somewhat different problems. These are modeling of video traffic in packet networks, low rate video compression, and the development of a lossy + lossless image compression algorithm, which might have some application in browsing algorithms. The lossy + lossless scheme is an extension of work previously done under this grant. It provides a simple technique for incorporating browsing capability. The low rate coding scheme is also a simple variation on the standard discrete cosine transform (DCT) coding approach. In spite of its simplicity, the approach provides surprisingly high quality reconstructions. The modeling approach is borrowed from the speech recognition literature, and seems to be promising in that it provides a simple way of obtaining an idea about the second order behavior of a particular coding scheme. Details about these are presented.

  10. A Wavelet-Based Approach to Pattern Discovery in Melodies

    DEFF Research Database (Denmark)

    Velarde, Gissel; Meredith, David; Weyde, Tillman

    2016-01-01

    We present a computational method for pattern discovery based on the application of the wavelet transform to symbolic representations of melodies or monophonic voices. We model the importance of a discovered pattern in terms of the compression ratio that can be achieved by using it to describe...

  11. Dependence and risk assessment for oil prices and exchange rate portfolios: A wavelet based approach

    Science.gov (United States)

    Aloui, Chaker; Jammazi, Rania

    2015-10-01

    In this article, we propose a wavelet-based approach to accommodate the stylized facts and complex structure of financial data, caused by frequent and abrupt changes of markets and noises. Specifically, we show how the combination of both continuous and discrete wavelet transforms with traditional financial models helps improve portfolio's market risk assessment. In the empirical stage, three wavelet-based models (wavelet-EGARCH with dynamic conditional correlations, wavelet-copula, and wavelet-extreme value) are considered and applied to crude oil price and US dollar exchange rate data. Our findings show that the wavelet-based approach provides an effective and powerful tool for detecting extreme moments and improving the accuracy of VaR and Expected Shortfall estimates of oil-exchange rate portfolios after noise is removed from the original data.

  12. ISTA-Net: Iterative Shrinkage-Thresholding Algorithm Inspired Deep Network for Image Compressive Sensing

    KAUST Repository

    Zhang, Jian

    2017-06-24

    Traditional methods for image compressive sensing (CS) reconstruction solve a well-defined inverse problem that is based on a predefined CS model, which defines the underlying structure of the problem and is generally solved by employing convergent iterative solvers. These optimization-based CS methods face the challenge of choosing optimal transforms and tuning parameters in their solvers, while also suffering from high computational complexity in most cases. Recently, some deep network based CS algorithms have been proposed to improve CS reconstruction performance, while dramatically reducing time complexity as compared to optimization-based methods. Despite their impressive results, the proposed networks (either with fully-connected or repetitive convolutional layers) lack any structural diversity and they are trained as a black box, void of any insights from the CS domain. In this paper, we combine the merits of both types of CS methods: the structure insights of optimization-based method and the performance/speed of network-based ones. We propose a novel structured deep network, dubbed ISTA-Net, which is inspired by the Iterative Shrinkage-Thresholding Algorithm (ISTA) for optimizing a general $l_1$ norm CS reconstruction model. ISTA-Net essentially implements a truncated form of ISTA, where all ISTA-Net parameters are learned end-to-end to minimize a reconstruction error in training. Borrowing more insights from the optimization realm, we propose an accelerated version of ISTA-Net, dubbed FISTA-Net, which is inspired by the fast iterative shrinkage-thresholding algorithm (FISTA). Interestingly, this acceleration naturally leads to skip connections in the underlying network design. Extensive CS experiments demonstrate that the proposed ISTA-Net and FISTA-Net outperform existing optimization-based and network-based CS methods by large margins, while maintaining a fast runtime.

  13. On exploiting wavelet bases in statistical region-based segmentation

    DEFF Research Database (Denmark)

    Stegmann, Mikkel Bille; Forchhammer, Søren

    2002-01-01

    Statistical region-based segmentation methods such as the Active Appearance Models establish dense correspondences by modelling variation of shape and pixel intensities in low-resolution 2D images. Unfortunately, for high-resolution 2D and 3D images, this approach is rendered infeasible due to ex...... 9-7 wavelet on cardiac MRIs and human faces show that the segmentation accuracy is minimally degraded at compression ratios of 1:10 and 1:20, respectively....

  14. The effect of image enhancement on the statistical analysis of functional neuroimages : Wavelet-based denoising and Gaussian smoothing

    NARCIS (Netherlands)

    Wink, AM; Roerdink, JBTM; Sonka, M; Fitzpatrick, JM

    2003-01-01

    The quality of statistical analyses of functional neuroimages is studied after applying various preprocessing methods. We present wavelet-based denoising as an alternative to Gaussian smoothing, the standard denoising method in statistical parametric mapping (SPM). The wavelet-based denoising

  15. The formation of spiral galaxies: adiabatic compression with Young's algorithm and the relation of dark matter haloes to their primordial antecedents

    NARCIS (Netherlands)

    Katz, Harley; McGaugh, Stacy S.; Sellwood, J. A.; de Blok, W. J. G.

    We utilize Young's algorithm to model the adiabatic compression of the dark matter haloes of galaxies in the THINGS survey to determine the relationship between the halo fit to the rotation curve and the corresponding primordial halo prior to compression. Young's algorithm conserves radial action

  16. A New RTL Design Approach for a DCT/IDCT-Based Image Compression Architecture using the mCBE Algorithm

    Directory of Open Access Journals (Sweden)

    Rachmad Vidya Wicaksana Putra

    2012-09-01

    Full Text Available In the literature, several approaches of designing a DCT/IDCT-based image compression system have been proposed. In this paper, we present a new RTL design approach with as main focus developing a DCT/IDCT-based image compression architecture using a self-created algorithm. This algorithm can efficiently minimize the amount of shifter-adders to substitute multipliers. We call this new algorithm the multiplication from Common Binary Expression (mCBE Algorithm. Besides this algorithm, we propose alternative quantization numbers, which can be implemented simply as shifters in digital hardware. Mostly, these numbers can retain a good compressed-image quality compared to JPEG recommendations. These ideas lead to our design being small in circuit area, multiplierless, and low in complexity. The proposed 8-point 1D-DCT design has only six stages, while the 8-point 1D-IDCT design has only seven stages (one stage being defined as equal to the delay of one shifter or 2-input adder. By using the pipelining method, we can achieve a high-speed architecture with latency as a trade-off consideration. The design has been synthesized and can reach a speed of up to 1.41ns critical path delay (709.22MHz.

  17. Multi-objective optimization of an underwater compressed air energy storage system using genetic algorithm

    International Nuclear Information System (INIS)

    Cheung, Brian C.; Carriveau, Rupp; Ting, David S.K.

    2014-01-01

    This paper presents the findings from a multi-objective genetic algorithm optimization study on the design parameters of an underwater compressed air energy storage system (UWCAES). A 4 MWh UWCAES system was numerically simulated and its energy, exergy, and exergoeconomics were analysed. Optimal system configurations were determined that maximized the UWCAES system round-trip efficiency and operating profit, and minimized the cost rate of exergy destruction and capital expenditures. The optimal solutions obtained from the multi-objective optimization model formed a Pareto-optimal front, and a single preferred solution was selected using the pseudo-weight vector multi-criteria decision making approach. A sensitivity analysis was performed on interest rates to gauge its impact on preferred system designs. Results showed similar preferred system designs for all interest rates in the studied range. The round-trip efficiency and operating profit of the preferred system designs were approximately 68.5% and $53.5/cycle, respectively. The cost rate of the system increased with interest rates. - Highlights: • UWCAES system configurations were developed using multi-objective optimization. • System was optimized for energy efficiency, exergy, and exergoeconomics • Pareto-optimal solution surfaces were developed at different interest rates. • Similar preferred system configurations were found at all interest rates studied

  18. Film Cooling Optimization Using Numerical Computation of the Compressible Viscous Flow Equations and Simplex Algorithm

    Directory of Open Access Journals (Sweden)

    Ahmed M. Elsayed

    2013-01-01

    Full Text Available Film cooling is vital to gas turbine blades to protect them from high temperatures and hence high thermal stresses. In the current work, optimization of film cooling parameters on a flat plate is investigated numerically. The effect of film cooling parameters such as inlet velocity direction, lateral and forward diffusion angles, blowing ratio, and streamwise angle on the cooling effectiveness is studied, and optimum cooling parameters are selected. The numerical simulation of the coolant flow through flat plate hole system is carried out using the “CFDRC package” coupled with the optimization algorithm “simplex” to maximize overall film cooling effectiveness. Unstructured finite volume technique is used to solve the steady, three-dimensional and compressible Navier-Stokes equations. The results are compared with the published numerical and experimental data of a cylindrically round-simple hole, and the results show good agreement. In addition, the results indicate that the average overall film cooling effectiveness is enhanced by decreasing the streamwise angle for high blowing ratio and by increasing the lateral and forward diffusion angles. Optimum geometry of the cooling hole on a flat plate is determined. In addition, numerical simulations of film cooling on actual turbine blade are performed using the flat plate optimal hole geometry.

  19. Secured Data Transmission Using Wavelet Based Steganography and cryptography

    OpenAIRE

    K.Ravindra Reddy; Ms Shaik Taj Mahaboob

    2014-01-01

    Steganography and cryptographic methods are used together with wavelets to increase the security of the data while transmitting through networks. Another technology, the digital watermarking is the process of embedding information into a digital (image) signal. Before embedding the plain text into the image, the plain text is encrypted by using Data Encryption Standard (DES) algorithm. The encrypted text is embedded into the LL sub band of the wavelet decomposed image using Le...

  20. A New Wavelet-Based Document Image Segmentation Scheme

    Institute of Scientific and Technical Information of China (English)

    赵健; 李道京; 俞卞章; 耿军平

    2002-01-01

    The document image segmentation is very useful for printing, faxing and data processing. An algorithm is developed for segmenting and classifying document image. Feature used for classification is based on the histogram distribution pattern of different image classes. The important attribute of the algorithm is using wavelet correlation image to enhance raw image's pattern, so the classification accuracy is improved. In this paper document image is divided into four types: background, photo, text and graph. Firstly, the document image background has been distingusished easily by former normally method; secondly, three image types will be distinguished by their typical histograms, in order to make histograms feature clearer, each resolution' s HH wavelet subimage is used to add to the raw image at their resolution. At last, the photo, text and praph have been devided according to how the feature fit to the Laplacian distrbution by -X2 and L. Simulations show that classification accuracy is significantly improved. The comparison with related shows that our algorithm provides both lower classification error rates and better visual results.

  1. Method and algorithm for efficient calibration of compressive hyperspectral imaging system based on a liquid crystal retarder

    Science.gov (United States)

    Shecter, Liat; Oiknine, Yaniv; August, Isaac; Stern, Adrian

    2017-09-01

    Recently we presented a Compressive Sensing Miniature Ultra-spectral Imaging System (CS-MUSI)1 . This system consists of a single Liquid Crystal (LC) phase retarder as a spectral modulator and a gray scale sensor array to capture a multiplexed signal of the imaged scene. By designing the LC spectral modulator in compliance with the Compressive Sensing (CS) guidelines and applying appropriate algorithms we demonstrated reconstruction of spectral (hyper/ ultra) datacubes from an order of magnitude fewer samples than taken by conventional sensors. The LC modulator is designed to have an effective width of a few tens of micrometers, therefore it is prone to imperfections and spatial nonuniformity. In this work, we present the study of this nonuniformity and present a mathematical algorithm that allows the inference of the spectral transmission over the entire cell area from only a few calibration measurements.

  2. Evaluation of onboard hyperspectral-image compression techniques for a parallel push-broom sensor

    Energy Technology Data Exchange (ETDEWEB)

    Briles, S.

    1996-04-01

    A single hyperspectral imaging sensor can produce frames with spatially-continuous rows of differing, but adjacent, spectral wavelength. If the frame sample-rate of the sensor is such that subsequent hyperspectral frames are spatially shifted by one row, then the sensor can be thought of as a parallel (in wavelength) push-broom sensor. An examination of data compression techniques for such a sensor is presented. The compression techniques are intended to be implemented onboard a space-based platform and to have implementation speeds that match the date rate of the sensor. Data partitions examined extend from individually operating on a single hyperspectral frame to operating on a data cube comprising the two spatial axes and the spectral axis. Compression algorithms investigated utilize JPEG-based image compression, wavelet-based compression and differential pulse code modulation. Algorithm performance is quantitatively presented in terms of root-mean-squared error and root-mean-squared correlation coefficient error. Implementation issues are considered in algorithm development.

  3. Telemedicine + OCT: toward design of optimized algorithms for high-quality compressed images

    Science.gov (United States)

    Mousavi, Mahta; Lurie, Kristen; Land, Julian; Javidi, Tara; Ellerbee, Audrey K.

    2014-03-01

    Telemedicine is an emerging technology that aims to provide clinical healthcare at a distance. Among its goals, the transfer of diagnostic images over telecommunication channels has been quite appealing to the medical community. When viewed as an adjunct to biomedical device hardware, one highly important consideration aside from the transfer rate and speed is the accuracy of the reconstructed image at the receiver end. Although optical coherence tomography (OCT) is an established imaging technique that is ripe for telemedicine, the effects of OCT data compression, which may be necessary on certain telemedicine platforms, have not received much attention in the literature. We investigate the performance and efficiency of several lossless and lossy compression techniques for OCT data and characterize their effectiveness with respect to achievable compression ratio, compression rate and preservation of image quality. We examine the effects of compression in the interferogram vs. A-scan domain as assessed with various objective and subjective metrics.

  4. Construction of Orthonormal Piecewise Polynomial Scaling and Wavelet Bases on Non-Equally Spaced Knots

    Directory of Open Access Journals (Sweden)

    Jean Pierre Astruc

    2007-01-01

    Full Text Available This paper investigates the mathematical framework of multiresolution analysis based on irregularly spaced knots sequence. Our presentation is based on the construction of nested nonuniform spline multiresolution spaces. From these spaces, we present the construction of orthonormal scaling and wavelet basis functions on bounded intervals. For any arbitrary degree of the spline function, we provide an explicit generalization allowing the construction of the scaling and wavelet bases on the nontraditional sequences. We show that the orthogonal decomposition is implemented using filter banks where the coefficients depend on the location of the knots on the sequence. Examples of orthonormal spline scaling and wavelet bases are provided. This approach can be used to interpolate irregularly sampled signals in an efficient way, by keeping the multiresolution approach.

  5. Wavelet-based partial volume effect correction for simultaneous MR/PET of the carotid arteries

    Energy Technology Data Exchange (ETDEWEB)

    Bini, Jason; Eldib, Mootaz [Translational and Molecular Imaging Institute, Icahn School of Medicine at Mount Sinai, NY, NY (United States); Department of Biomedical Engineering, The City College of New York, NY, NY (United States); Robson, Philip M; Fayad, Zahi A [Translational and Molecular Imaging Institute, Icahn School of Medicine at Mount Sinai, NY, NY (United States)

    2014-07-29

    Simultaneous MR/PET scanners allow for the exploration and development of novel PVE correction techniques without the challenges of coregistration of MR and PET. The development of a wavelet-based PVE correction method, to improve PET quantification, has proven successful in brain PET.{sup 2} We report here the first attempt to apply these methods to simultaneous MR/PET imaging of the carotid arteries.

  6. Model-free stochastic processes studied with q-wavelet-based informational tools

    International Nuclear Information System (INIS)

    Perez, D.G.; Zunino, L.; Martin, M.T.; Garavaglia, M.; Plastino, A.; Rosso, O.A.

    2007-01-01

    We undertake a model-free investigation of stochastic processes employing q-wavelet based quantifiers, that constitute a generalization of their Shannon counterparts. It is shown that (i) interesting physical information becomes accessible in such a way (ii) for special q values the quantifiers are more sensitive than the Shannon ones and (iii) there exist an implicit relationship between the Hurst parameter H and q within this wavelet framework

  7. Performance Analysis of Wavelet Based MC-CDMA System with Implementation of Various Antenna Diversity Schemes

    OpenAIRE

    Islam, Md. Matiqul; Kabir, M. Hasnat; Ullah, Sk. Enayet

    2012-01-01

    The impact of using wavelet based technique on the performance of a MC-CDMA wireless communication system has been investigated. The system under proposed study incorporates Walsh Hadamard codes to discriminate the message signal for individual user. A computer program written in Mathlab source code is developed and this simulation study is made with implementation of various antenna diversity schemes and fading (Rayleigh and Rician) channel. Computer simulation results demonstrate that the p...

  8. Wavelet-based partial volume effect correction for simultaneous MR/PET of the carotid arteries

    International Nuclear Information System (INIS)

    Bini, Jason; Eldib, Mootaz; Robson, Philip M; Fayad, Zahi A

    2014-01-01

    Simultaneous MR/PET scanners allow for the exploration and development of novel PVE correction techniques without the challenges of coregistration of MR and PET. The development of a wavelet-based PVE correction method, to improve PET quantification, has proven successful in brain PET. 2 We report here the first attempt to apply these methods to simultaneous MR/PET imaging of the carotid arteries.

  9. Supercomputer implementation of finite element algorithms for high speed compressible flows. Progress report, period ending 30 June 1986

    International Nuclear Information System (INIS)

    Thornton, E.A.; Ramakrishnan, R.

    1986-06-01

    Prediction of compressible flow phenomena using the finite element method is of recent origin and considerable interest. Two shock capturing finite element formulations for high speed compressible flows are described. A Taylor-Galerkin formulation uses a Taylor series expansion in time coupled with a Galerkin weighted residual statement. The Taylor-Galerkin algorithms use explicit artificial dissipation, and the performance of three dissipation models are compared. A Petrov-Galerkin algorithm has as its basis the concepts of streamline upwinding. Vectorization strategies are developed to implement the finite element formulations on the NASA Langley VPS-32. The vectorization scheme results in finite element programs that use vectors of length of the order of the number of nodes or elements. The use of the vectorization procedure speeds up processing rates by over two orders of magnitude. The Taylor-Galerkin and Petrov-Galerkin algorithms are evaluated for 2D inviscid flows on criteria such as solution accuracy, shock resolution, computational speed and storage requirements. The convergence rates for both algorithms are enhanced by local time-stepping schemes. Extension of the vectorization procedure for predicting 2D viscous and 3D inviscid flows are demonstrated. Conclusions are drawn regarding the applicability of the finite element procedures for realistic problems that require hundreds of thousands of nodes

  10. Study on the effects of sample selection on spectral reflectance reconstruction based on the algorithm of compressive sensing

    International Nuclear Information System (INIS)

    Zhang, Leihong; Liang, Dong

    2016-01-01

    In order to solve the problem that reconstruction efficiency and precision is not high, in this paper different samples are selected to reconstruct spectral reflectance, and a new kind of spectral reflectance reconstruction method based on the algorithm of compressive sensing is provided. Four different color numbers of matte color cards such as the ColorChecker Color Rendition Chart and Color Checker SG, the copperplate paper spot color card of Panton, and the Munsell colors card are chosen as training samples, the spectral image is reconstructed respectively by the algorithm of compressive sensing and pseudo-inverse and Wiener, and the results are compared. These methods of spectral reconstruction are evaluated by root mean square error and color difference accuracy. The experiments show that the cumulative contribution rate and color difference of the Munsell colors card are better than those of the other three numbers of color cards in the same conditions of reconstruction, and the accuracy of the spectral reconstruction will be affected by the training sample of different numbers of color cards. The key technology of reconstruction means that the uniformity and representation of the training sample selection has important significance upon reconstruction. In this paper, the influence of the sample selection on the spectral image reconstruction is studied. The precision of the spectral reconstruction based on the algorithm of compressive sensing is higher than that of the traditional algorithm of spectral reconstruction. By the MATLAB simulation results, it can be seen that the spectral reconstruction precision and efficiency are affected by the different color numbers of the training sample. (paper)

  11. Compression and channel-coding algorithms for high-definition television signals

    Science.gov (United States)

    Alparone, Luciano; Benelli, Giuliano; Fabbri, A. F.

    1990-09-01

    In this paper results of investigations about the effects of channel errors in the transmission of images compressed by means of techniques based on Discrete Cosine Transform (DOT) and Vector Quantization (VQ) are presented. Since compressed images are heavily degraded by noise in the transmission channel more seriously for what concern VQ-coded images theoretical studies and simulations are presented in order to define and evaluate this degradation. Some channel coding schemes are proposed in order to protect information during transmission. Hamming codes (7 (15 and (31 have been used for DCT-compressed images more powerful codes such as Golay (23 for VQ-compressed images. Performances attainable with softdecoding techniques are also evaluated better quality images have been obtained than using classical hard decoding techniques. All tests have been carried out to simulate the transmission of a digital image from HDTV signal over an AWGN channel with P5K modulation.

  12. Analysis of Compression Algorithm in Ground Collision Avoidance Systems (Auto-GCAS)

    Science.gov (United States)

    Schmalz, Tyler; Ryan, Jack

    2011-01-01

    Automatic Ground Collision Avoidance Systems (Auto-GCAS) utilizes Digital Terrain Elevation Data (DTED) stored onboard a plane to determine potential recovery maneuvers. Because of the current limitations of computer hardware on military airplanes such as the F-22 and F-35, the DTED must be compressed through a lossy technique called binary-tree tip-tilt. The purpose of this study is to determine the accuracy of the compressed data with respect to the original DTED. This study is mainly interested in the magnitude of the error between the two as well as the overall distribution of the errors throughout the DTED. By understanding how the errors of the compression technique are affected by various factors (topography, density of sampling points, sub-sampling techniques, etc.), modifications can be made to the compression technique resulting in better accuracy. This, in turn, would minimize unnecessary activation of A-GCAS during flight as well as maximizing its contribution to fighter safety.

  13. Image and video compression for multimedia engineering fundamentals, algorithms, and standards

    CERN Document Server

    Shi, Yun Q

    2008-01-01

    Part I: Fundamentals Introduction Quantization Differential Coding Transform Coding Variable-Length Coding: Information Theory Results (II) Run-Length and Dictionary Coding: Information Theory Results (III) Part II: Still Image Compression Still Image Coding: Standard JPEG Wavelet Transform for Image Coding: JPEG2000 Nonstandard Still Image Coding Part III: Motion Estimation and Compensation Motion Analysis and Motion Compensation Block Matching Pel-Recursive Technique Optical Flow Further Discussion and Summary on 2-D Motion Estimation Part IV: Video Compression Fundam

  14. Enhancement of Satellite Image Compression Using a Hybrid (DWT-DCT) Algorithm

    Science.gov (United States)

    Shihab, Halah Saadoon; Shafie, Suhaidi; Ramli, Abdul Rahman; Ahmad, Fauzan

    2017-12-01

    Discrete Cosine Transform (DCT) and Discrete Wavelet Transform (DWT) image compression techniques have been utilized in most of the earth observation satellites launched during the last few decades. However, these techniques have some issues that should be addressed. The DWT method has proven to be more efficient than DCT for several reasons. Nevertheless, the DCT can be exploited to improve the high-resolution satellite image compression when combined with the DWT technique. Hence, a proposed hybrid (DWT-DCT) method was developed and implemented in the current work, simulating an image compression system on-board on a small remote sensing satellite, with the aim of achieving a higher compression ratio to decrease the onboard data storage and the downlink bandwidth, while avoiding further complex levels of DWT. This method also succeeded in maintaining the reconstructed satellite image quality through replacing the standard forward DWT thresholding and quantization processes with an alternative process that employed the zero-padding technique, which also helped to reduce the processing time of DWT compression. The DCT, DWT and the proposed hybrid methods were implemented individually, for comparison, on three LANDSAT 8 images, using the MATLAB software package. A comparison was also made between the proposed method and three other previously published hybrid methods. The evaluation of all the objective and subjective results indicated the feasibility of using the proposed hybrid (DWT-DCT) method to enhance the image compression process on-board satellites.

  15. Detection of Dendritic Spines Using Wavelet-Based Conditional Symmetric Analysis and Regularized Morphological Shared-Weight Neural Networks

    Directory of Open Access Journals (Sweden)

    Shuihua Wang

    2015-01-01

    Full Text Available Identification and detection of dendritic spines in neuron images are of high interest in diagnosis and treatment of neurological and psychiatric disorders (e.g., Alzheimer’s disease, Parkinson’s diseases, and autism. In this paper, we have proposed a novel automatic approach using wavelet-based conditional symmetric analysis and regularized morphological shared-weight neural networks (RMSNN for dendritic spine identification involving the following steps: backbone extraction, localization of dendritic spines, and classification. First, a new algorithm based on wavelet transform and conditional symmetric analysis has been developed to extract backbone and locate the dendrite boundary. Then, the RMSNN has been proposed to classify the spines into three predefined categories (mushroom, thin, and stubby. We have compared our proposed approach against the existing methods. The experimental result demonstrates that the proposed approach can accurately locate the dendrite and accurately classify the spines into three categories with the accuracy of 99.1% for “mushroom” spines, 97.6% for “stubby” spines, and 98.6% for “thin” spines.

  16. A Comparison of Compressed Sensing and Sparse Recovery Algorithms Applied to Simulation Data

    Directory of Open Access Journals (Sweden)

    Ya Ju Fan

    2016-08-01

    Full Text Available The move toward exascale computing for scientific simulations is placing new demands on compression techniques. It is expected that the I/O system will not be able to support the volume of data that is expected to be written out. To enable quantitative analysis and scientific discovery, we are interested in techniques that compress high-dimensional simulation data and can provide perfect or near-perfect reconstruction.  In this paper, we explore the use of compressed sensing (CS techniques to reduce the size of the data before they are written out. Using large-scale simulation data, we investigate how the sufficient sparsity condition and the contrast in the data affect the quality of reconstruction and the degree of compression.  We provide suggestions for the practical implementation of CS techniques and compare them with other sparse recovery methods. Our results show that despite longer times for reconstruction, compressed sensing techniques can provide near perfect reconstruction over a range of data with varying sparsity.

  17. A compressed sensing based reconstruction algorithm for synchrotron source propagation-based X-ray phase contrast computed tomography

    Energy Technology Data Exchange (ETDEWEB)

    Melli, Seyed Ali, E-mail: sem649@mail.usask.ca [Department of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK (Canada); Wahid, Khan A. [Department of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK (Canada); Babyn, Paul [Department of Medical Imaging, University of Saskatchewan, Saskatoon, SK (Canada); Montgomery, James [College of Medicine, University of Saskatchewan, Saskatoon, SK (Canada); Snead, Elisabeth [Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK (Canada); El-Gayed, Ali [College of Medicine, University of Saskatchewan, Saskatoon, SK (Canada); Pettitt, Murray; Wolkowski, Bailey [College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, SK (Canada); Wesolowski, Michal [Department of Medical Imaging, University of Saskatchewan, Saskatoon, SK (Canada)

    2016-01-11

    Synchrotron source propagation-based X-ray phase contrast computed tomography is increasingly used in pre-clinical imaging. However, it typically requires a large number of projections, and subsequently a large radiation dose, to produce high quality images. To improve the applicability of this imaging technique, reconstruction algorithms that can reduce the radiation dose and acquisition time without degrading image quality are needed. The proposed research focused on using a novel combination of Douglas–Rachford splitting and randomized Kaczmarz algorithms to solve large-scale total variation based optimization in a compressed sensing framework to reconstruct 2D images from a reduced number of projections. Visual assessment and quantitative performance evaluations of a synthetic abdomen phantom and real reconstructed image of an ex-vivo slice of canine prostate tissue demonstrate that the proposed algorithm is competitive in reconstruction process compared with other well-known algorithms. An additional potential benefit of reducing the number of projections would be reduction of time for motion artifact to occur if the sample moves during image acquisition. Use of this reconstruction algorithm to reduce the required number of projections in synchrotron source propagation-based X-ray phase contrast computed tomography is an effective form of dose reduction that may pave the way for imaging of in-vivo samples.

  18. A Fast and Accurate Algorithm for l1 Minimization Problems in Compressive Sampling (Preprint)

    Science.gov (United States)

    2013-01-22

    However, updating uk+1 via the formulation of Step 2 in Algorithm 1 can be implemented through the use of the component-wise Gauss - Seidel iteration which...may accelerate the rate of convergence of the algorithm and therefore reduce the total CPU-time consumed. The efficiency of component-wise Gauss - Seidel ...Micchelli, L. Shen, and Y. Xu, A proximity algorithm accelerated by Gauss - Seidel iterations for L1/TV denoising models, Inverse Problems, 28 (2012), p

  19. Investigation of a Huffman-based compression algorithm for the ALICE TPC read-out in LHC Run 3

    Energy Technology Data Exchange (ETDEWEB)

    Klewin, Sebastian [Physikalisches Institut, University of Heidelberg (Germany); Collaboration: ALICE-Collaboration

    2016-07-01

    Within the scope of the ALICE upgrade towards the Run 3 of the Large Hadron Collider at CERN, starting in 2020, the ALICE Time Projection Chamber (TPC) will be reworked in order to allow for a continuous read-out. This rework includes not only a replacement of the current read-out chambers with Gas Electron Multiplier (GEM) technology, but also new front-end electronics. To be able to read out the whole data stream without loosing information, in particular without zero-suppression, a lossless compression algorithm, the Huffman encoding, was investigated and adapted to the needs of the TPC. In this talk, an algorithm, adapted for an FPGA implementation, is presented. We show its capability to reduce the data volume to less than 40% of its original size.

  20. A Novel Compressed Sensing Method for Magnetic Resonance Imaging: Exponential Wavelet Iterative Shrinkage-Thresholding Algorithm with Random Shift

    Directory of Open Access Journals (Sweden)

    Yudong Zhang

    2016-01-01

    Full Text Available Aim. It can help improve the hospital throughput to accelerate magnetic resonance imaging (MRI scanning. Patients will benefit from less waiting time. Task. In the last decade, various rapid MRI techniques on the basis of compressed sensing (CS were proposed. However, both computation time and reconstruction quality of traditional CS-MRI did not meet the requirement of clinical use. Method. In this study, a novel method was proposed with the name of exponential wavelet iterative shrinkage-thresholding algorithm with random shift (abbreviated as EWISTARS. It is composed of three successful components: (i exponential wavelet transform, (ii iterative shrinkage-thresholding algorithm, and (iii random shift. Results. Experimental results validated that, compared to state-of-the-art approaches, EWISTARS obtained the least mean absolute error, the least mean-squared error, and the highest peak signal-to-noise ratio. Conclusion. EWISTARS is superior to state-of-the-art approaches.

  1. A Novel Compressed Sensing Method for Magnetic Resonance Imaging: Exponential Wavelet Iterative Shrinkage-Thresholding Algorithm with Random Shift

    Science.gov (United States)

    Zhang, Yudong; Yang, Jiquan; Yang, Jianfei; Liu, Aijun; Sun, Ping

    2016-01-01

    Aim. It can help improve the hospital throughput to accelerate magnetic resonance imaging (MRI) scanning. Patients will benefit from less waiting time. Task. In the last decade, various rapid MRI techniques on the basis of compressed sensing (CS) were proposed. However, both computation time and reconstruction quality of traditional CS-MRI did not meet the requirement of clinical use. Method. In this study, a novel method was proposed with the name of exponential wavelet iterative shrinkage-thresholding algorithm with random shift (abbreviated as EWISTARS). It is composed of three successful components: (i) exponential wavelet transform, (ii) iterative shrinkage-thresholding algorithm, and (iii) random shift. Results. Experimental results validated that, compared to state-of-the-art approaches, EWISTARS obtained the least mean absolute error, the least mean-squared error, and the highest peak signal-to-noise ratio. Conclusion. EWISTARS is superior to state-of-the-art approaches. PMID:27066068

  2. A Novel 2D Image Compression Algorithm Based on Two Levels DWT and DCT Transforms with Enhanced Minimize-Matrix-Size Algorithm for High Resolution Structured Light 3D Surface Reconstruction

    Science.gov (United States)

    Siddeq, M. M.; Rodrigues, M. A.

    2015-09-01

    Image compression techniques are widely used on 2D image 2D video 3D images and 3D video. There are many types of compression techniques and among the most popular are JPEG and JPEG2000. In this research, we introduce a new compression method based on applying a two level discrete cosine transform (DCT) and a two level discrete wavelet transform (DWT) in connection with novel compression steps for high-resolution images. The proposed image compression algorithm consists of four steps. (1) Transform an image by a two level DWT followed by a DCT to produce two matrices: DC- and AC-Matrix, or low and high frequency matrix, respectively, (2) apply a second level DCT on the DC-Matrix to generate two arrays, namely nonzero-array and zero-array, (3) apply the Minimize-Matrix-Size algorithm to the AC-Matrix and to the other high-frequencies generated by the second level DWT, (4) apply arithmetic coding to the output of previous steps. A novel decompression algorithm, Fast-Match-Search algorithm (FMS), is used to reconstruct all high-frequency matrices. The FMS-algorithm computes all compressed data probabilities by using a table of data, and then using a binary search algorithm for finding decompressed data inside the table. Thereafter, all decoded DC-values with the decoded AC-coefficients are combined in one matrix followed by inverse two levels DCT with two levels DWT. The technique is tested by compression and reconstruction of 3D surface patches. Additionally, this technique is compared with JPEG and JPEG2000 algorithm through 2D and 3D root-mean-square-error following reconstruction. The results demonstrate that the proposed compression method has better visual properties than JPEG and JPEG2000 and is able to more accurately reconstruct surface patches in 3D.

  3. Compression of Index Term Dictionary in an Inverted-File-Oriented Database: Some Effective Algorithms.

    Science.gov (United States)

    Wisniewski, Janusz L.

    1986-01-01

    Discussion of a new method of index term dictionary compression in an inverted-file-oriented database highlights a technique of word coding, which generates short fixed-length codes obtained from the index terms themselves by analysis of monogram and bigram statistical distributions. Substantial savings in communication channel utilization are…

  4. Comparison of high order algorithms in Aerosol and Aghora for compressible flows

    Directory of Open Access Journals (Sweden)

    Mbengoue D. A.

    2013-12-01

    Full Text Available This article summarizes the work done within the Colargol project during CEMRACS 2012. The aim of this project is to compare the implementations of high order finite element methods for compressible flows that have been developed at ONERA and at INRIA for about one year, within the Aghora and Aerosol libraries.

  5. Handling the data management needs of high-throughput sequencing data: SpeedGene, a compression algorithm for the efficient storage of genetic data

    Science.gov (United States)

    2012-01-01

    Background As Next-Generation Sequencing data becomes available, existing hardware environments do not provide sufficient storage space and computational power to store and process the data due to their enormous size. This is and will be a frequent problem that is encountered everyday by researchers who are working on genetic data. There are some options available for compressing and storing such data, such as general-purpose compression software, PBAT/PLINK binary format, etc. However, these currently available methods either do not offer sufficient compression rates, or require a great amount of CPU time for decompression and loading every time the data is accessed. Results Here, we propose a novel and simple algorithm for storing such sequencing data. We show that, the compression factor of the algorithm ranges from 16 to several hundreds, which potentially allows SNP data of hundreds of Gigabytes to be stored in hundreds of Megabytes. We provide a C++ implementation of the algorithm, which supports direct loading and parallel loading of the compressed format without requiring extra time for decompression. By applying the algorithm to simulated and real datasets, we show that the algorithm gives greater compression rate than the commonly used compression methods, and the data-loading process takes less time. Also, The C++ library provides direct-data-retrieving functions, which allows the compressed information to be easily accessed by other C++ programs. Conclusions The SpeedGene algorithm enables the storage and the analysis of next generation sequencing data in current hardware environment, making system upgrades unnecessary. PMID:22591016

  6. A New RTL Design Approach for a DCT/IDCT-Based Image Compression Architecture using the mCBE Algorithm

    Directory of Open Access Journals (Sweden)

    Rachmad Vidya Wicaksana Putra

    2013-09-01

    Full Text Available In  the  literature, several approaches  of  designing  a  DCT/IDCT-based image compression system have been proposed.  In this paper,  we present a new RTL design approach with as main  focus developing a  DCT/IDCT-based image compression  architecture  using  a  self-created  algorithm.  This  algorithm  can efficiently  minimize  the  amount  of  shifter -adders  to  substitute  multiplier s.  We call  this  new  algorithm  the  multiplication  from  Common  Binary  Expression (mCBE  Algorithm. Besides this algorithm, we propose alternative quantization numbers,  which  can  be  implemented  simply  as  shifters  in  digital  hardware. Mostly, these numbers can retain a good compressed-image quality  compared to JPEG  recommendations.  These  ideas  lead  to  our  design  being  small  in  circuit area,  multiplierless,  and  low  in  complexity.  The  proposed  8-point  1D-DCT design  has  only  six  stages,  while  the  8-point  1D-IDCT  design  has  only  seven stages  (one  stage  being  defined as  equal  to  the  delay  of  one  shifter  or  2-input adder. By using the pipelining method, we can achieve a high-speed architecture with latency as    a  trade-off consideration. The  design has been synthesized and can reach a speed of up to 1.41ns critical path delay (709.22MHz. 

  7. Supplementary Material for: Compressing an Ensemble With Statistical Models: An Algorithm for Global 3D Spatio-Temporal Temperature

    KAUST Repository

    Castruccio, Stefano

    2016-01-01

    One of the main challenges when working with modern climate model ensembles is the increasingly larger size of the data produced, and the consequent difficulty in storing large amounts of spatio-temporally resolved information. Many compression algorithms can be used to mitigate this problem, but since they are designed to compress generic scientific datasets, they do not account for the nature of climate model output and they compress only individual simulations. In this work, we propose a different, statistics-based approach that explicitly accounts for the space-time dependence of the data for annual global three-dimensional temperature fields in an initial condition ensemble. The set of estimated parameters is small (compared to the data size) and can be regarded as a summary of the essential structure of the ensemble output; therefore, it can be used to instantaneously reproduce the temperature fields in an ensemble with a substantial saving in storage and time. The statistical model exploits the gridded geometry of the data and parallelization across processors. It is therefore computationally convenient and allows to fit a nontrivial model to a dataset of 1 billion data points with a covariance matrix comprising of 1018 entries. Supplementary materials for this article are available online.

  8. Online Semiparametric Identification of Lithium-Ion Batteries Using the Wavelet-Based Partially Linear Battery Model

    Directory of Open Access Journals (Sweden)

    Caiping Zhang

    2013-05-01

    Full Text Available Battery model identification is very important for reliable battery management as well as for battery system design process. The common problem in identifying battery models is how to determine the most appropriate mathematical model structure and parameterized coefficients based on the measured terminal voltage and current. This paper proposes a novel semiparametric approach using the wavelet-based partially linear battery model (PLBM and a recursive penalized wavelet estimator for online battery model identification. Three main contributions are presented. First, the semiparametric PLBM is proposed to simulate the battery dynamics. Compared with conventional electrical models of a battery, the proposed PLBM is equipped with a semiparametric partially linear structure, which includes a parametric part (involving the linear equivalent circuit parameters and a nonparametric part [involving the open-circuit voltage (OCV]. Thus, even with little prior knowledge about the OCV, the PLBM can be identified using a semiparametric identification framework. Second, we model the nonparametric part of the PLBM using the truncated wavelet multiresolution analysis (MRA expansion, which leads to a parsimonious model structure that is highly desirable for model identification; using this model, the PLBM could be represented in a linear-in-parameter manner. Finally, to exploit the sparsity of the wavelet MRA representation and allow for online implementation, a penalized wavelet estimator that uses a modified online cyclic coordinate descent algorithm is proposed to identify the PLBM in a recursive fashion. The simulation and experimental results demonstrate that the proposed PLBM with the corresponding identification algorithm can accurately simulate the dynamic behavior of a lithium-ion battery in the Federal Urban Driving Schedule tests.

  9. DSP accelerator for the wavelet compression/decompression of high- resolution images

    Energy Technology Data Exchange (ETDEWEB)

    Hunt, M.A.; Gleason, S.S.; Jatko, W.B.

    1993-07-23

    A Texas Instruments (TI) TMS320C30-based S-Bus digital signal processing (DSP) module was used to accelerate a wavelet-based compression and decompression algorithm applied to high-resolution fingerprint images. The law enforcement community, together with the National Institute of Standards and Technology (NISI), is adopting a standard based on the wavelet transform for the compression, transmission, and decompression of scanned fingerprint images. A two-dimensional wavelet transform of the input image is computed. Then spatial/frequency regions are automatically analyzed for information content and quantized for subsequent Huffman encoding. Compression ratios range from 10:1 to 30:1 while maintaining the level of image quality necessary for identification. Several prototype systems were developed using SUN SPARCstation 2 with a 1280 {times} 1024 8-bit display, 64-Mbyte random access memory (RAM), Tiber distributed data interface (FDDI), and Spirit-30 S-Bus DSP-accelerators from Sonitech. The final implementation of the DSP-accelerated algorithm performed the compression or decompression operation in 3.5 s per print. Further increases in system throughput were obtained by adding several DSP accelerators operating in parallel.

  10. Creating wavelet-based models for real-time synthesis of perceptually convincing environmental sounds

    Science.gov (United States)

    Miner, Nadine Elizabeth

    1998-09-01

    This dissertation presents a new wavelet-based method for synthesizing perceptually convincing, dynamic sounds using parameterized sound models. The sound synthesis method is applicable to a variety of applications including Virtual Reality (VR), multi-media, entertainment, and the World Wide Web (WWW). A unique contribution of this research is the modeling of the stochastic, or non-pitched, sound components. This stochastic-based modeling approach leads to perceptually compelling sound synthesis. Two preliminary studies conducted provide data on multi-sensory interaction and audio-visual synchronization timing. These results contributed to the design of the new sound synthesis method. The method uses a four-phase development process, including analysis, parameterization, synthesis and validation, to create the wavelet-based sound models. A patent is pending for this dynamic sound synthesis method, which provides perceptually-realistic, real-time sound generation. This dissertation also presents a battery of perceptual experiments developed to verify the sound synthesis results. These experiments are applicable for validation of any sound synthesis technique.

  11. Traffic characterization and modeling of wavelet-based VBR encoded video

    Energy Technology Data Exchange (ETDEWEB)

    Yu Kuo; Jabbari, B. [George Mason Univ., Fairfax, VA (United States); Zafar, S. [Argonne National Lab., IL (United States). Mathematics and Computer Science Div.

    1997-07-01

    Wavelet-based video codecs provide a hierarchical structure for the encoded data, which can cater to a wide variety of applications such as multimedia systems. The characteristics of such an encoder and its output, however, have not been well examined. In this paper, the authors investigate the output characteristics of a wavelet-based video codec and develop a composite model to capture the traffic behavior of its output video data. Wavelet decomposition transforms the input video in a hierarchical structure with a number of subimages at different resolutions and scales. the top-level wavelet in this structure contains most of the signal energy. They first describe the characteristics of traffic generated by each subimage and the effect of dropping various subimages at the encoder on the signal-to-noise ratio at the receiver. They then develop an N-state Markov model to describe the traffic behavior of the top wavelet. The behavior of the remaining wavelets are then obtained through estimation, based on the correlations between these subimages at the same level of resolution and those wavelets located at an immediate higher level. In this paper, a three-state Markov model is developed. The resulting traffic behavior described by various statistical properties, such as moments and correlations, etc., is then utilized to validate their model.

  12. Evaluation of Effectiveness of Wavelet Based Denoising Schemes Using ANN and SVM for Bearing Condition Classification

    Directory of Open Access Journals (Sweden)

    Vijay G. S.

    2012-01-01

    Full Text Available The wavelet based denoising has proven its ability to denoise the bearing vibration signals by improving the signal-to-noise ratio (SNR and reducing the root-mean-square error (RMSE. In this paper seven wavelet based denoising schemes have been evaluated based on the performance of the Artificial Neural Network (ANN and the Support Vector Machine (SVM, for the bearing condition classification. The work consists of two parts, the first part in which a synthetic signal simulating the defective bearing vibration signal with Gaussian noise was subjected to these denoising schemes. The best scheme based on the SNR and the RMSE was identified. In the second part, the vibration signals collected from a customized Rolling Element Bearing (REB test rig for four bearing conditions were subjected to these denoising schemes. Several time and frequency domain features were extracted from the denoised signals, out of which a few sensitive features were selected using the Fisher’s Criterion (FC. Extracted features were used to train and test the ANN and the SVM. The best denoising scheme identified, based on the classification performances of the ANN and the SVM, was found to be the same as the one obtained using the synthetic signal.

  13. Comparison of wavelet based denoising schemes for gear condition monitoring: An Artificial Neural Network based Approach

    Science.gov (United States)

    Ahmed, Rounaq; Srinivasa Pai, P.; Sriram, N. S.; Bhat, Vasudeva

    2018-02-01

    Vibration Analysis has been extensively used in recent past for gear fault diagnosis. The vibration signals extracted is usually contaminated with noise and may lead to wrong interpretation of results. The denoising of extracted vibration signals helps the fault diagnosis by giving meaningful results. Wavelet Transform (WT) increases signal to noise ratio (SNR), reduces root mean square error (RMSE) and is effective to denoise the gear vibration signals. The extracted signals have to be denoised by selecting a proper denoising scheme in order to prevent the loss of signal information along with noise. An approach has been made in this work to show the effectiveness of Principal Component Analysis (PCA) to denoise gear vibration signal. In this regard three selected wavelet based denoising schemes namely PCA, Empirical Mode Decomposition (EMD), Neighcoeff Coefficient (NC), has been compared with Adaptive Threshold (AT) an extensively used wavelet based denoising scheme for gear vibration signal. The vibration signals acquired from a customized gear test rig were denoised by above mentioned four denoising schemes. The fault identification capability as well as SNR, Kurtosis and RMSE for the four denoising schemes have been compared. Features extracted from the denoised signals have been used to train and test artificial neural network (ANN) models. The performances of the four denoising schemes have been evaluated based on the performance of the ANN models. The best denoising scheme has been identified, based on the classification accuracy results. PCA is effective in all the regards as a best denoising scheme.

  14. A Wavelet-Based Finite Element Method for the Self-Shielding Issue in Neutron Transport

    International Nuclear Information System (INIS)

    Le Tellier, R.; Fournier, D.; Ruggieri, J. M.

    2009-01-01

    This paper describes a new approach for treating the energy variable of the neutron transport equation in the resolved resonance energy range. The aim is to avoid recourse to a case-specific spatially dependent self-shielding calculation when considering a broad group structure. This method consists of a discontinuous Galerkin discretization of the energy using wavelet-based elements. A Σ t -orthogonalization of the element basis is presented in order to make the approach tractable for spatially dependent problems. First numerical tests of this method are carried out in a limited framework under the Livolant-Jeanpierre hypotheses in an infinite homogeneous medium. They are mainly focused on the way to construct the wavelet-based element basis. Indeed, the prior selection of these wavelet functions by a thresholding strategy applied to the discrete wavelet transform of a given quantity is a key issue for the convergence rate of the method. The Canuto thresholding approach applied to an approximate flux is found to yield a nearly optimal convergence in many cases. In these tests, the capability of such a finite element discretization to represent the flux depression in a resonant region is demonstrated; a relative accuracy of 10 -3 on the flux (in L 2 -norm) is reached with less than 100 wavelet coefficients per group. (authors)

  15. Spectral information enhancement using wavelet-based iterative filtering for in vivo gamma spectrometry.

    Science.gov (United States)

    Paul, Sabyasachi; Sarkar, P K

    2013-04-01

    Use of wavelet transformation in stationary signal processing has been demonstrated for denoising the measured spectra and characterisation of radionuclides in the in vivo monitoring analysis, where difficulties arise due to very low activity level to be estimated in biological systems. The large statistical fluctuations often make the identification of characteristic gammas from radionuclides highly uncertain, particularly when interferences from progenies are also present. A new wavelet-based noise filtering methodology has been developed for better detection of gamma peaks in noisy data. This sequential, iterative filtering method uses the wavelet multi-resolution approach for noise rejection and an inverse transform after soft 'thresholding' over the generated coefficients. Analyses of in vivo monitoring data of (235)U and (238)U were carried out using this method without disturbing the peak position and amplitude while achieving a 3-fold improvement in the signal-to-noise ratio, compared with the original measured spectrum. When compared with other data-filtering techniques, the wavelet-based method shows the best results.

  16. Application of wavelet-based multi-model Kalman filters to real-time flood forecasting

    Science.gov (United States)

    Chou, Chien-Ming; Wang, Ru-Yih

    2004-04-01

    This paper presents the application of a multimodel method using a wavelet-based Kalman filter (WKF) bank to simultaneously estimate decomposed state variables and unknown parameters for real-time flood forecasting. Applying the Haar wavelet transform alters the state vector and input vector of the state space. In this way, an overall detail plus approximation describes each new state vector and input vector, which allows the WKF to simultaneously estimate and decompose state variables. The wavelet-based multimodel Kalman filter (WMKF) is a multimodel Kalman filter (MKF), in which the Kalman filter has been substituted for a WKF. The WMKF then obtains M estimated state vectors. Next, the M state-estimates, each of which is weighted by its possibility that is also determined on-line, are combined to form an optimal estimate. Validations conducted for the Wu-Tu watershed, a small watershed in Taiwan, have demonstrated that the method is effective because of the decomposition of wavelet transform, the adaptation of the time-varying Kalman filter and the characteristics of the multimodel method. Validation results also reveal that the resulting method enhances the accuracy of the runoff prediction of the rainfall-runoff process in the Wu-Tu watershed.

  17. EBLAST: an efficient high-compression image transformation 3. application to Internet image and video transmission

    Science.gov (United States)

    Schmalz, Mark S.; Ritter, Gerhard X.; Caimi, Frank M.

    2001-12-01

    A wide variety of digital image compression transforms developed for still imaging and broadcast video transmission are unsuitable for Internet video applications due to insufficient compression ratio, poor reconstruction fidelity, or excessive computational requirements. Examples include hierarchical transforms that require all, or large portion of, a source image to reside in memory at one time, transforms that induce significant locking effect at operationally salient compression ratios, and algorithms that require large amounts of floating-point computation. The latter constraint holds especially for video compression by small mobile imaging devices for transmission to, and compression on, platforms such as palmtop computers or personal digital assistants (PDAs). As Internet video requirements for frame rate and resolution increase to produce more detailed, less discontinuous motion sequences, a new class of compression transforms will be needed, especially for small memory models and displays such as those found on PDAs. In this, the third series of papers, we discuss the EBLAST compression transform and its application to Internet communication. Leading transforms for compression of Internet video and still imagery are reviewed and analyzed, including GIF, JPEG, AWIC (wavelet-based), wavelet packets, and SPIHT, whose performance is compared with EBLAST. Performance analysis criteria include time and space complexity and quality of the decompressed image. The latter is determined by rate-distortion data obtained from a database of realistic test images. Discussion also includes issues such as robustness of the compressed format to channel noise. EBLAST has been shown to perform superiorly to JPEG and, unlike current wavelet compression transforms, supports fast implementation on embedded processors with small memory models.

  18. A Parallel Non-Overlapping Domain-Decomposition Algorithm for Compressible Fluid Flow Problems on Triangulated Domains

    Science.gov (United States)

    Barth, Timothy J.; Chan, Tony F.; Tang, Wei-Pai

    1998-01-01

    This paper considers an algebraic preconditioning algorithm for hyperbolic-elliptic fluid flow problems. The algorithm is based on a parallel non-overlapping Schur complement domain-decomposition technique for triangulated domains. In the Schur complement technique, the triangulation is first partitioned into a number of non-overlapping subdomains and interfaces. This suggests a reordering of triangulation vertices which separates subdomain and interface solution unknowns. The reordering induces a natural 2 x 2 block partitioning of the discretization matrix. Exact LU factorization of this block system yields a Schur complement matrix which couples subdomains and the interface together. The remaining sections of this paper present a family of approximate techniques for both constructing and applying the Schur complement as a domain-decomposition preconditioner. The approximate Schur complement serves as an algebraic coarse space operator, thus avoiding the known difficulties associated with the direct formation of a coarse space discretization. In developing Schur complement approximations, particular attention has been given to improving sequential and parallel efficiency of implementations without significantly degrading the quality of the preconditioner. A computer code based on these developments has been tested on the IBM SP2 using MPI message passing protocol. A number of 2-D calculations are presented for both scalar advection-diffusion equations as well as the Euler equations governing compressible fluid flow to demonstrate performance of the preconditioning algorithm.

  19. ISTA-Net: Iterative Shrinkage-Thresholding Algorithm Inspired Deep Network for Image Compressive Sensing

    KAUST Repository

    Zhang, Jian; Ghanem, Bernard

    2017-01-01

    and the performance/speed of network-based ones. We propose a novel structured deep network, dubbed ISTA-Net, which is inspired by the Iterative Shrinkage-Thresholding Algorithm (ISTA) for optimizing a general $l_1$ norm CS reconstruction model. ISTA-Net essentially

  20. An object-oriented and quadrilateral-mesh based solution adaptive algorithm for compressible multi-fluid flows

    Science.gov (United States)

    Zheng, H. W.; Shu, C.; Chew, Y. T.

    2008-07-01

    In this paper, an object-oriented and quadrilateral-mesh based solution adaptive algorithm for the simulation of compressible multi-fluid flows is presented. The HLLC scheme (Harten, Lax and van Leer approximate Riemann solver with the Contact wave restored) is extended to adaptively solve the compressible multi-fluid flows under complex geometry on unstructured mesh. It is also extended to the second-order of accuracy by using MUSCL extrapolation. The node, edge and cell are arranged in such an object-oriented manner that each of them inherits from a basic object. A home-made double link list is designed to manage these objects so that the inserting of new objects and removing of the existing objects (nodes, edges and cells) are independent of the number of objects and only of the complexity of O( 1). In addition, the cells with different levels are further stored in different lists. This avoids the recursive calculation of solution of mother (non-leaf) cells. Thus, high efficiency is obtained due to these features. Besides, as compared to other cell-edge adaptive methods, the separation of nodes would reduce the memory requirement of redundant nodes, especially in the cases where the level number is large or the space dimension is three. Five two-dimensional examples are used to examine its performance. These examples include vortex evolution problem, interface only problem under structured mesh and unstructured mesh, bubble explosion under the water, bubble-shock interaction, and shock-interface interaction inside the cylindrical vessel. Numerical results indicate that there is no oscillation of pressure and velocity across the interface and it is feasible to apply it to solve compressible multi-fluid flows with large density ratio (1000) and strong shock wave (the pressure ratio is 10,000) interaction with the interface.

  1. DEFLATE Compression Algorithm Corrects for Overestimation of Phylogenetic Diversity by Grantham Approach to Single-Nucleotide Polymorphism Classification

    Directory of Open Access Journals (Sweden)

    Arran Schlosberg

    2014-05-01

    Full Text Available Improvements in speed and cost of genome sequencing are resulting in increasing numbers of novel non-synonymous single nucleotide polymorphisms (nsSNPs in genes known to be associated with disease. The large number of nsSNPs makes laboratory-based classification infeasible and familial co-segregation with disease is not always possible. In-silico methods for classification or triage are thus utilised. A popular tool based on multiple-species sequence alignments (MSAs and work by Grantham, Align-GVGD, has been shown to underestimate deleterious effects, particularly as sequence numbers increase. We utilised the DEFLATE compression algorithm to account for expected variation across a number of species. With the adjusted Grantham measure we derived a means of quantitatively clustering known neutral and deleterious nsSNPs from the same gene; this was then used to assign novel variants to the most appropriate cluster as a means of binary classification. Scaling of clusters allows for inter-gene comparison of variants through a single pathogenicity score. The approach improves upon the classification accuracy of Align-GVGD while correcting for sensitivity to large MSAs. Open-source code and a web server are made available at https://github.com/aschlosberg/CompressGV.

  2. Fundamental Frequency Estimation of the Speech Signal Compressed by MP3 Algorithm Using PCC Interpolation

    Directory of Open Access Journals (Sweden)

    MILIVOJEVIC, Z. N.

    2010-02-01

    Full Text Available In this paper the fundamental frequency estimation results of the MP3 modeled speech signal are analyzed. The estimation of the fundamental frequency was performed by the Picking-Peaks algorithm with the implemented Parametric Cubic Convolution (PCC interpolation. The efficiency of PCC was tested for Catmull-Rom, Greville and Greville two-parametric kernel. Depending on MSE, a window that gives optimal results was chosen.

  3. A Wavelet-Based Unified Power Quality Conditioner to Eliminate Wind Turbine Non-Ideality Consequences on Grid-Connected Photovoltaic Systems

    Directory of Open Access Journals (Sweden)

    Bijan Rahmani

    2016-05-01

    Full Text Available The integration of renewable power sources with power grids presents many challenges, such as synchronization with the grid, power quality problems and so on. The shunt active power filter (SAPF can be a solution to address the issue while suppressing the grid-end current harmonics and distortions. Nonetheless, available SAPFs work somewhat unpredictably in practice. This is attributed to the dependency of the SAPF controller on nonlinear complicated equations and two distorted variables, such as load current and voltage, to produce the current reference. This condition will worsen when the plant includes wind turbines which inherently produce 3rd, 5th, 7th and 11th voltage harmonics. Moreover, the inability of the typical phase locked loop (PLL used to synchronize the SAPF reference with the power grid also disrupts SAPF operation. This paper proposes an improved synchronous reference frame (SRF which is equipped with a wavelet-based PLL to control the SAPF, using one variable such as load current. Firstly the fundamental positive sequence of the source voltage, obtained using a wavelet, is used as the input signal of the PLL through an orthogonal signal generator process. Then, the generated orthogonal signals are applied through the SRF-based compensation algorithm to synchronize the SAPF’s reference with power grid. To further force the remained uncompensated grid current harmonics to pass through the SAPF, an improved series filter (SF equipped with a current harmonic suppression loop is proposed. Concurrent operation of the improved SAPF and SF is coordinated through a unified power quality conditioner (UPQC. The DC-link capacitor of the proposed UPQC, used to interconnect a photovoltaic (PV system to the power grid, is regulated by an adaptive controller. Matlab/Simulink results confirm that the proposed wavelet-based UPQC results in purely sinusoidal grid-end currents with total harmonic distortion (THD = 1.29%, which leads to high

  4. Quality Variation Control for Three-Dimensional Wavelet-Based Video Coders

    Directory of Open Access Journals (Sweden)

    Vidhya Seran

    2007-02-01

    Full Text Available The fluctuation of quality in time is a problem that exists in motion-compensated-temporal-filtering (MCTF- based video coding. The goal of this paper is to design a solution for overcoming the distortion fluctuation challenges faced by wavelet-based video coders. We propose a new technique for determining the number of bits to be allocated to each temporal subband in order to minimize the fluctuation in the quality of the reconstructed video. Also, the wavelet filter properties are explored to design suitable scaling coefficients with the objective of smoothening the temporal PSNR. The biorthogonal 5/3 wavelet filter is considered in this paper and experimental results are presented for 2D+t and t+2D MCTF wavelet coders.

  5. Quality Variation Control for Three-Dimensional Wavelet-Based Video Coders

    Directory of Open Access Journals (Sweden)

    Seran Vidhya

    2007-01-01

    Full Text Available The fluctuation of quality in time is a problem that exists in motion-compensated-temporal-filtering (MCTF- based video coding. The goal of this paper is to design a solution for overcoming the distortion fluctuation challenges faced by wavelet-based video coders. We propose a new technique for determining the number of bits to be allocated to each temporal subband in order to minimize the fluctuation in the quality of the reconstructed video. Also, the wavelet filter properties are explored to design suitable scaling coefficients with the objective of smoothening the temporal PSNR. The biorthogonal 5/3 wavelet filter is considered in this paper and experimental results are presented for 2D+t and t+2D MCTF wavelet coders.

  6. Wavelet-based tracking of bacteria in unreconstructed off-axis holograms.

    Science.gov (United States)

    Marin, Zach; Wallace, J Kent; Nadeau, Jay; Khalil, Andre

    2018-03-01

    We propose an automated wavelet-based method of tracking particles in unreconstructed off-axis holograms to provide rough estimates of the presence of motion and particle trajectories in digital holographic microscopy (DHM) time series. The wavelet transform modulus maxima segmentation method is adapted and tailored to extract Airy-like diffraction disks, which represent bacteria, from DHM time series. In this exploratory analysis, the method shows potential for estimating bacterial tracks in low-particle-density time series, based on a preliminary analysis of both living and dead Serratia marcescens, and for rapidly providing a single-bit answer to whether a sample chamber contains living or dead microbes or is empty. Copyright © 2017 Elsevier Inc. All rights reserved.

  7. Wavelet-based spectral finite element dynamic analysis for an axially moving Timoshenko beam

    Science.gov (United States)

    Mokhtari, Ali; Mirdamadi, Hamid Reza; Ghayour, Mostafa

    2017-08-01

    In this article, wavelet-based spectral finite element (WSFE) model is formulated for time domain and wave domain dynamic analysis of an axially moving Timoshenko beam subjected to axial pretension. The formulation is similar to conventional FFT-based spectral finite element (SFE) model except that Daubechies wavelet basis functions are used for temporal discretization of the governing partial differential equations into a set of ordinary differential equations. The localized nature of Daubechies wavelet basis functions helps to rule out problems of SFE model due to periodicity assumption, especially during inverse Fourier transformation and back to time domain. The high accuracy of WSFE model is then evaluated by comparing its results with those of conventional finite element and SFE results. The effects of moving beam speed and axial tensile force on vibration and wave characteristics, and static and dynamic stabilities of moving beam are investigated.

  8. A wavelet-based Gaussian method for energy dispersive X-ray fluorescence spectrum

    Directory of Open Access Journals (Sweden)

    Pan Liu

    2017-05-01

    Full Text Available This paper presents a wavelet-based Gaussian method (WGM for the peak intensity estimation of energy dispersive X-ray fluorescence (EDXRF. The relationship between the parameters of Gaussian curve and the wavelet coefficients of Gaussian peak point is firstly established based on the Mexican hat wavelet. It is found that the Gaussian parameters can be accurately calculated by any two wavelet coefficients at the peak point which has to be known. This fact leads to a local Gaussian estimation method for spectral peaks, which estimates the Gaussian parameters based on the detail wavelet coefficients of Gaussian peak point. The proposed method is tested via simulated and measured spectra from an energy X-ray spectrometer, and compared with some existing methods. The results prove that the proposed method can directly estimate the peak intensity of EDXRF free from the background information, and also effectively distinguish overlap peaks in EDXRF spectrum.

  9. Passive microrheology of soft materials with atomic force microscopy: A wavelet-based spectral analysis

    Energy Technology Data Exchange (ETDEWEB)

    Martinez-Torres, C.; Streppa, L. [CNRS, UMR5672, Laboratoire de Physique, Ecole Normale Supérieure de Lyon, 46 Allée d' Italie, Université de Lyon, 69007 Lyon (France); Arneodo, A.; Argoul, F. [CNRS, UMR5672, Laboratoire de Physique, Ecole Normale Supérieure de Lyon, 46 Allée d' Italie, Université de Lyon, 69007 Lyon (France); CNRS, UMR5798, Laboratoire Ondes et Matière d' Aquitaine, Université de Bordeaux, 351 Cours de la Libération, 33405 Talence (France); Argoul, P. [Université Paris-Est, Ecole des Ponts ParisTech, SDOA, MAST, IFSTTAR, 14-20 Bd Newton, Cité Descartes, 77420 Champs sur Marne (France)

    2016-01-18

    Compared to active microrheology where a known force or modulation is periodically imposed to a soft material, passive microrheology relies on the spectral analysis of the spontaneous motion of tracers inherent or external to the material. Passive microrheology studies of soft or living materials with atomic force microscopy (AFM) cantilever tips are rather rare because, in the spectral densities, the rheological response of the materials is hardly distinguishable from other sources of random or periodic perturbations. To circumvent this difficulty, we propose here a wavelet-based decomposition of AFM cantilever tip fluctuations and we show that when applying this multi-scale method to soft polymer layers and to living myoblasts, the structural damping exponents of these soft materials can be retrieved.

  10. Wavelet-based linear-response time-dependent density-functional theory

    International Nuclear Information System (INIS)

    Natarajan, Bhaarathi; Genovese, Luigi; Casida, Mark E.; Deutsch, Thierry; Burchak, Olga N.

    2012-01-01

    Highlights: ► We has been implemented LR-TD-DFT in the pseudopotential wavelet-based program. ► We have compared the results against all-electron Gaussian-type program. ► Orbital energies converges significantly faster for BigDFT than for DEMON2K. ► We report the X-ray crystal structure of the small organic molecule flugi6. ► Measured and calculated absorption spectrum of flugi6 is also reported. - Abstract: Linear-response time-dependent (TD) density-functional theory (DFT) has been implemented in the pseudopotential wavelet-based electronic structure program BIGDFT and results are compared against those obtained with the all-electron Gaussian-type orbital program DEMON2K for the calculation of electronic absorption spectra of N 2 using the TD local density approximation (LDA). The two programs give comparable excitation energies and absorption spectra once suitably extensive basis sets are used. Convergence of LDA density orbitals and orbital energies to the basis-set limit is significantly faster for BIGDFT than for DEMON2K. However the number of virtual orbitals used in TD-DFT calculations is a parameter in BIGDFT, while all virtual orbitals are included in TD-DFT calculations in DEMON2K. As a reality check, we report the X-ray crystal structure and the measured and calculated absorption spectrum (excitation energies and oscillator strengths) of the small organic molecule N-cyclohexyl-2-(4-methoxyphenyl)imidazo[1, 2-a]pyridin-3-amine.

  11. Wavelet-based peak detection and a new charge inference procedure for MS/MS implemented in ProteoWizard's msConvert.

    Science.gov (United States)

    French, William R; Zimmerman, Lisa J; Schilling, Birgit; Gibson, Bradford W; Miller, Christine A; Townsend, R Reid; Sherrod, Stacy D; Goodwin, Cody R; McLean, John A; Tabb, David L

    2015-02-06

    We report the implementation of high-quality signal processing algorithms into ProteoWizard, an efficient, open-source software package designed for analyzing proteomics tandem mass spectrometry data. Specifically, a new wavelet-based peak-picker (CantWaiT) and a precursor charge determination algorithm (Turbocharger) have been implemented. These additions into ProteoWizard provide universal tools that are independent of vendor platform for tandem mass spectrometry analyses and have particular utility for intralaboratory studies requiring the advantages of different platforms convergent on a particular workflow or for interlaboratory investigations spanning multiple platforms. We compared results from these tools to those obtained using vendor and commercial software, finding that in all cases our algorithms resulted in a comparable number of identified peptides for simple and complex samples measured on Waters, Agilent, and AB SCIEX quadrupole time-of-flight and Thermo Q-Exactive mass spectrometers. The mass accuracy of matched precursor ions also compared favorably with vendor and commercial tools. Additionally, typical analysis runtimes (∼1-100 ms per MS/MS spectrum) were short enough to enable the practical use of these high-quality signal processing tools for large clinical and research data sets.

  12. Wavelet-Based Peak Detection and a New Charge Inference Procedure for MS/MS Implemented in ProteoWizard’s msConvert

    Science.gov (United States)

    2015-01-01

    We report the implementation of high-quality signal processing algorithms into ProteoWizard, an efficient, open-source software package designed for analyzing proteomics tandem mass spectrometry data. Specifically, a new wavelet-based peak-picker (CantWaiT) and a precursor charge determination algorithm (Turbocharger) have been implemented. These additions into ProteoWizard provide universal tools that are independent of vendor platform for tandem mass spectrometry analyses and have particular utility for intralaboratory studies requiring the advantages of different platforms convergent on a particular workflow or for interlaboratory investigations spanning multiple platforms. We compared results from these tools to those obtained using vendor and commercial software, finding that in all cases our algorithms resulted in a comparable number of identified peptides for simple and complex samples measured on Waters, Agilent, and AB SCIEX quadrupole time-of-flight and Thermo Q-Exactive mass spectrometers. The mass accuracy of matched precursor ions also compared favorably with vendor and commercial tools. Additionally, typical analysis runtimes (∼1–100 ms per MS/MS spectrum) were short enough to enable the practical use of these high-quality signal processing tools for large clinical and research data sets. PMID:25411686

  13. Optimal Image Data Compression For Whole Slide Images

    Directory of Open Access Journals (Sweden)

    J. Isola

    2016-06-01

    Differences in WSI file sizes of scanned images deemed “visually lossless” were significant. If we set Hamamatsu Nanozoomer .NDPI file size (using its default “jpeg80 quality” as 100%, the size of a “visually lossless” JPEG2000 file was only 15-20% of that. Comparisons to Aperio and 3D-Histech files (.svs and .mrxs at their default settings yielded similar results. A further optimization of JPEG2000 was done by treating empty slide area as uniform white-grey surface, which could be maximally compressed. Using this algorithm, JPEG2000 file sizes were only half, or even smaller, of original JPEG2000. Variation was due to the proportion of empty slide area on the scan. We anticipate that wavelet-based image compression methods, such as JPEG2000, have a significant advantage in saving storage costs of scanned whole slide image. In routine pathology laboratories applying WSI technology widely to their histology material, absolute cost savings can be substantial.  

  14. Effects of Different Compression Techniques on Diagnostic Accuracies of Breast Masses on Digitized Mammograms

    International Nuclear Information System (INIS)

    Zhigang Liang; Xiangying Du; Jiabin Liu; Yanhui Yang; Dongdong Rong; Xinyu Y ao; Kuncheng Li

    2008-01-01

    Background: The JPEG 2000 compression technique has recently been introduced into the medical imaging field. It is critical to understand the effects of this technique on the detection of breast masses on digitized images by human observers. Purpose: To evaluate whether lossless and lossy techniques affect the diagnostic results of malignant and benign breast masses on digitized mammograms. Material and Methods: A total of 90 screen-film mammograms including craniocaudal and lateral views obtained from 45 patients were selected by two non-observing radiologists. Of these, 22 cases were benign lesions and 23 cases were malignant. The mammographic films were digitized by a laser film digitizer, and compressed to three levels (lossless and lossy 20:1 and 40:1) using the JPEG 2000 wavelet-based image compression algorithm. Four radiologists with 10-12 years' experience in mammography interpreted the original and compressed images. The time interval was 3 weeks for each reading session. A five-point malignancy scale was used, with a score of 1 corresponding to definitely not a malignant mass, a score of 2 referring to not a malignant mass, a score of 3 meaning possibly a malignant mass, a score of 4 being probably a malignant mass, and a score of 5 interpreted as definitely a malignant mass. The radiologists' performance was evaluated using receiver operating characteristic analysis. Results: The average Az values for all radiologists decreased from 0.8933 for the original uncompressed images to 0.8299 for the images compressed at 40:1. This difference was not statistically significant. The detection accuracy of the original images was better than that of the compressed images, and the Az values decreased with increasing compression ratio. Conclusion: Digitized mammograms compressed at 40:1 could be used to substitute original images in the diagnosis of breast cancer

  15. Algorithms

    Indian Academy of Sciences (India)

    polynomial) division have been found in Vedic Mathematics which are dated much before Euclid's algorithm. A programming language Is used to describe an algorithm for execution on a computer. An algorithm expressed using a programming.

  16. Experimental optimization of a direct injection homogeneous charge compression ignition gasoline engine using split injections with fully automated microgenetic algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Canakci, M. [Kocaeli Univ., Izmit (Turkey); Reitz, R.D. [Wisconsin Univ., Dept. of Mechanical Engineering, Madison, WI (United States)

    2003-03-01

    Homogeneous charge compression ignition (HCCI) is receiving attention as a new low-emission engine concept. Little is known about the optimal operating conditions for this engine operation mode. Combustion under homogeneous, low equivalence ratio conditions results in modest temperature combustion products, containing very low concentrations of NO{sub x} and particulate matter (PM) as well as providing high thermal efficiency. However, this combustion mode can produce higher HC and CO emissions than those of conventional engines. An electronically controlled Caterpillar single-cylinder oil test engine (SCOTE), originally designed for heavy-duty diesel applications, was converted to an HCCI direct injection (DI) gasoline engine. The engine features an electronically controlled low-pressure direct injection gasoline (DI-G) injector with a 60 deg spray angle that is capable of multiple injections. The use of double injection was explored for emission control and the engine was optimized using fully automated experiments and a microgenetic algorithm optimization code. The variables changed during the optimization include the intake air temperature, start of injection timing and the split injection parameters (per cent mass of fuel in each injection, dwell between the pulses). The engine performance and emissions were determined at 700 r/min with a constant fuel flowrate at 10 MPa fuel injection pressure. The results show that significant emissions reductions are possible with the use of optimal injection strategies. (Author)

  17. Wavelet-based linear-response time-dependent density-functional theory

    Science.gov (United States)

    Natarajan, Bhaarathi; Genovese, Luigi; Casida, Mark E.; Deutsch, Thierry; Burchak, Olga N.; Philouze, Christian; Balakirev, Maxim Y.

    2012-06-01

    Linear-response time-dependent (TD) density-functional theory (DFT) has been implemented in the pseudopotential wavelet-based electronic structure program BIGDFT and results are compared against those obtained with the all-electron Gaussian-type orbital program DEMON2K for the calculation of electronic absorption spectra of N2 using the TD local density approximation (LDA). The two programs give comparable excitation energies and absorption spectra once suitably extensive basis sets are used. Convergence of LDA density orbitals and orbital energies to the basis-set limit is significantly faster for BIGDFT than for DEMON2K. However the number of virtual orbitals used in TD-DFT calculations is a parameter in BIGDFT, while all virtual orbitals are included in TD-DFT calculations in DEMON2K. As a reality check, we report the X-ray crystal structure and the measured and calculated absorption spectrum (excitation energies and oscillator strengths) of the small organic molecule N-cyclohexyl-2-(4-methoxyphenyl)imidazo[1, 2-a]pyridin-3-amine.

  18. Wavelet-based blind identification of the UCLA Factor building using ambient and earthquake responses

    International Nuclear Information System (INIS)

    Hazra, B; Narasimhan, S

    2010-01-01

    Blind source separation using second-order blind identification (SOBI) has been successfully applied to the problem of output-only identification, popularly known as ambient system identification. In this paper, the basic principles of SOBI for the static mixtures case is extended using the stationary wavelet transform (SWT) in order to improve the separability of sources, thereby improving the quality of identification. Whereas SOBI operates on the covariance matrices constructed directly from measurements, the method presented in this paper, known as the wavelet-based modified cross-correlation method, operates on multiple covariance matrices constructed from the correlation of the responses. The SWT is selected because of its time-invariance property, which means that the transform of a time-shifted signal can be obtained as a shifted version of the transform of the original signal. This important property is exploited in the construction of several time-lagged covariance matrices. The issue of non-stationary sources is addressed through the formation of several time-shifted, windowed covariance matrices. Modal identification results are presented for the UCLA Factor building using ambient vibration data and for recorded responses from the Parkfield earthquake, and compared with published results for this building. Additionally, the effect of sensor density on the identification results is also investigated

  19. Finding the multipath propagation of multivariable crude oil prices using a wavelet-based network approach

    Science.gov (United States)

    Jia, Xiaoliang; An, Haizhong; Sun, Xiaoqi; Huang, Xuan; Gao, Xiangyun

    2016-04-01

    The globalization and regionalization of crude oil trade inevitably give rise to the difference of crude oil prices. The understanding of the pattern of the crude oil prices' mutual propagation is essential for analyzing the development of global oil trade. Previous research has focused mainly on the fuzzy long- or short-term one-to-one propagation of bivariate oil prices, generally ignoring various patterns of periodical multivariate propagation. This study presents a wavelet-based network approach to help uncover the multipath propagation of multivariable crude oil prices in a joint time-frequency period. The weekly oil spot prices of the OPEC member states from June 1999 to March 2011 are adopted as the sample data. First, we used wavelet analysis to find different subseries based on an optimal decomposing scale to describe the periodical feature of the original oil price time series. Second, a complex network model was constructed based on an optimal threshold selection to describe the structural feature of multivariable oil prices. Third, Bayesian network analysis (BNA) was conducted to find the probability causal relationship based on periodical structural features to describe the various patterns of periodical multivariable propagation. Finally, the significance of the leading and intermediary oil prices is discussed. These findings are beneficial for the implementation of periodical target-oriented pricing policies and investment strategies.

  20. Online Epileptic Seizure Prediction Using Wavelet-Based Bi-Phase Correlation of Electrical Signals Tomography.

    Science.gov (United States)

    Vahabi, Zahra; Amirfattahi, Rasoul; Shayegh, Farzaneh; Ghassemi, Fahimeh

    2015-09-01

    Considerable efforts have been made in order to predict seizures. Among these methods, the ones that quantify synchronization between brain areas, are the most important methods. However, to date, a practically acceptable result has not been reported. In this paper, we use a synchronization measurement method that is derived according to the ability of bi-spectrum in determining the nonlinear properties of a system. In this method, first, temporal variation of the bi-spectrum of different channels of electro cardiography (ECoG) signals are obtained via an extended wavelet-based time-frequency analysis method; then, to compare different channels, the bi-phase correlation measure is introduced. Since, in this way, the temporal variation of the amount of nonlinear coupling between brain regions, which have not been considered yet, are taken into account, results are more reliable than the conventional phase-synchronization measures. It is shown that, for 21 patients of FSPEEG database, bi-phase correlation can discriminate the pre-ictal and ictal states, with very low false positive rates (FPRs) (average: 0.078/h) and high sensitivity (100%). However, the proposed seizure predictor still cannot significantly overcome the random predictor for all patients.

  1. Wavelet-Based Visible and Infrared Image Fusion: A Comparative Study

    Directory of Open Access Journals (Sweden)

    Angel D. Sappa

    2016-06-01

    Full Text Available This paper evaluates different wavelet-based cross-spectral image fusion strategies adopted to merge visible and infrared images. The objective is to find the best setup independently of the evaluation metric used to measure the performance. Quantitative performance results are obtained with state of the art approaches together with adaptations proposed in the current work. The options evaluated in the current work result from the combination of different setups in the wavelet image decomposition stage together with different fusion strategies for the final merging stage that generates the resulting representation. Most of the approaches evaluate results according to the application for which they are intended for. Sometimes a human observer is selected to judge the quality of the obtained results. In the current work, quantitative values are considered in order to find correlations between setups and performance of obtained results; these correlations can be used to define a criteria for selecting the best fusion strategy for a given pair of cross-spectral images. The whole procedure is evaluated with a large set of correctly registered visible and infrared image pairs, including both Near InfraRed (NIR and Long Wave InfraRed (LWIR.

  2. A Wavelet-based method for processing signal of fog in strap-down inertial systems

    Energy Technology Data Exchange (ETDEWEB)

    Han, D.; Xiong, C.; Liu, H. [Huazhong University of Science & Technology, Wuhan (China)

    2009-07-01

    Fibre optical gyroscopes (FOGs) have been applied widely in many fields in contrast, with their counterparts such as mechanical gyroscopes and ring laser gyroscopes. The precision of FOG is affected significantly by bias drift, angle random walk temperature effects and noises. Especially, uncertain disturbances resulting from road irregularities often affect accuracy of strap-down inertial system (SINS). Hence, eliminating, uncertain disturbances from outputs of it FOG plays a crucial role to improve accuracy of SINS. This paper presents a wavelet-based method for denoising signals of FOGs in SINS used for exploring and rescuing robots in coal mines. Property of road irregularities in mines is taken into account as a key factor resulting in uncertain disturbances in this research. Both frequency band and amplitude of uncertain disturbances are introduced to choose filtering thresholds. Experimental results have demonstrated that the proposed method can efficiently eliminate uncertain disturbances due to road irregularities from outputs of FOGs and improve accuracy of surrogate data. It indicates that the proposed method has a significant potential in FOG-related applications.

  3. Wavelet-based adaptation methodology combined with finite difference WENO to solve ideal magnetohydrodynamics

    Science.gov (United States)

    Do, Seongju; Li, Haojun; Kang, Myungjoo

    2017-06-01

    In this paper, we present an accurate and efficient wavelet-based adaptive weighted essentially non-oscillatory (WENO) scheme for hydrodynamics and ideal magnetohydrodynamics (MHD) equations arising from the hyperbolic conservation systems. The proposed method works with the finite difference weighted essentially non-oscillatory (FD-WENO) method in space and the third order total variation diminishing (TVD) Runge-Kutta (RK) method in time. The philosophy of this work is to use the lifted interpolating wavelets as not only detector for singularities but also interpolator. Especially, flexible interpolations can be performed by an inverse wavelet transformation. When the divergence cleaning method introducing auxiliary scalar field ψ is applied to the base numerical schemes for imposing divergence-free condition to the magnetic field in a MHD equation, the approximations to derivatives of ψ require the neighboring points. Moreover, the fifth order WENO interpolation requires large stencil to reconstruct high order polynomial. In such cases, an efficient interpolation method is necessary. The adaptive spatial differentiation method is considered as well as the adaptation of grid resolutions. In order to avoid the heavy computation of FD-WENO, in the smooth regions fixed stencil approximation without computing the non-linear WENO weights is used, and the characteristic decomposition method is replaced by a component-wise approach. Numerical results demonstrate that with the adaptive method we are able to resolve the solutions that agree well with the solution of the corresponding fine grid.

  4. Application of wavelet based MFDFA on Mueller matrix images for cervical pre-cancer detection

    Science.gov (United States)

    Zaffar, Mohammad; Pradhan, Asima

    2018-02-01

    A systematic study has been conducted on application of wavelet based multifractal de-trended fluctuation analysis (MFDFA) on Mueller matrix (MM) images of cervical tissue sections for early cancer detection. Changes in multiple scattering and orientation of fibers are observed by utilizing a discrete wavelet transform (Daubechies) which identifies fluctuations over polynomial trends. Fluctuation profiles, after 9th level decomposition, for all elements of MM qualitatively establish a demarcation of different grades of cancer from normal tissue. Moreover, applying MFDFA on MM images, Hurst exponent profiles for images of MM qualitatively are seen to display differences. In addition, the values of Hurst exponent increase for the diagonal elements of MM with increasing grades of the cervical cancer, while the value for the elements which correspond to linear polarizance decrease. However, for circular polarizance the value increases with increasing grades. These fluctuation profiles reveal the trend of local variation of refractive -indices and along with Hurst exponent profile, may serve as a useful biological metric in the early detection of cervical cancer. The quantitative measurements of Hurst exponent for diagonal and first column (polarizance governing elements) elements which reflect changes in multiple scattering and structural anisotropy in stroma, may be sensitive indicators of pre-cancer.

  5. Use of wavelet based iterative filtering to improve denoising of spectral information for in-vivo gamma spectrometry

    International Nuclear Information System (INIS)

    Paul, Sabyasachi; Sarkar, P.K.

    2012-05-01

    The characterization of radionuclide in the in-vivo monitoring analysis using gamma spectrometry poses difficulty due to very low activity level in biological systems. The large statistical fluctuations often make identification of characteristic gammas from radionuclides highly uncertain, particularly when interferences from progenies are also present. A new wavelet based noise filtering methodology has been developed for better detection of gamma peaks while analyzing noisy spectrometric data. This sequential, iterative filtering method uses the wavelet multi-resolution approach for the noise rejection and inverse transform after soft thresholding over the generated coefficients. Analyses of in-vivo monitoring data of 235 U and 238 U have been carried out using this method without disturbing the peak position and amplitude while achieving a threefold improvement in the signal to noise ratio, compared to the original measured spectrum. When compared with other data filtering techniques, the wavelet based method shows better results. (author)

  6. BETTER FINGERPRINT IMAGE COMPRESSION AT LOWER BIT-RATES: AN APPROACH USING MULTIWAVELETS WITH OPTIMISED PREFILTER COEFFICIENTS

    Directory of Open Access Journals (Sweden)

    N R Rema

    2017-08-01

    Full Text Available In this paper, a multiwavelet based fingerprint compression technique using set partitioning in hierarchical trees (SPIHT algorithm with optimised prefilter coefficients is proposed. While wavelet based progressive compression techniques give a blurred image at lower bit rates due to lack of high frequency information, multiwavelets can be used efficiently to represent high frequency information. SA4 (Symmetric Antisymmetric multiwavelet when combined with SPIHT reduces the number of nodes during initialization to 1/4th compared to SPIHT with wavelet. This reduction in nodes leads to improvement in PSNR at lower bit rates. The PSNR can be further improved by optimizing the prefilter coefficients. In this work genetic algorithm (GA is used for optimizing prefilter coefficients. Using the proposed technique, there is a considerable improvement in PSNR at lower bit rates, compared to existing techniques in literature. An overall average improvement of 4.23dB and 2.52dB for bit rates in between 0.01 to 1 has been achieved for the images in the databases FVC 2000 DB1 and FVC 2002 DB3 respectively. The quality of the reconstructed image is better even at higher compression ratios like 80:1 and 100:1. The level of decomposition required for a multiwavelet is lesser compared to a wavelet.

  7. Algorithms

    Indian Academy of Sciences (India)

    to as 'divide-and-conquer'. Although there has been a large effort in realizing efficient algorithms, there are not many universally accepted algorithm design paradigms. In this article, we illustrate algorithm design techniques such as balancing, greedy strategy, dynamic programming strategy, and backtracking or traversal of ...

  8. A wavelet-based intermittency detection technique from PIV investigations in transitional boundary layers

    Science.gov (United States)

    Simoni, Daniele; Lengani, Davide; Guida, Roberto

    2016-09-01

    The transition process of the boundary layer growing over a flat plate with pressure gradient simulating the suction side of a low-pressure turbine blade and elevated free-stream turbulence intensity level has been analyzed by means of PIV and hot-wire measurements. A detailed view of the instantaneous flow field in the wall-normal plane highlights the physics characterizing the complex process leading to the formation of large-scale coherent structures during breaking down of the ordered motion of the flow, thus generating randomized oscillations (i.e., turbulent spots). This analysis gives the basis for the development of a new procedure aimed at determining the intermittency function describing (statistically) the transition process. To this end, a wavelet-based method has been employed for the identification of the large-scale structures created during the transition process. Successively, a probability density function of these events has been defined so that an intermittency function is deduced. This latter strictly corresponds to the intermittency function of the transitional flow computed trough a classic procedure based on hot-wire data. The agreement between the two procedures in the intermittency shape and spot production rate proves the capability of the method in providing the statistical representation of the transition process. The main advantages of the procedure here proposed concern with its applicability to PIV data; it does not require a threshold level to discriminate first- and/or second-order time-derivative of hot-wire time traces (that makes the method not influenced by the operator); and it provides a clear evidence of the connection between the flow physics and the statistical representation of transition based on theory of turbulent spot propagation.

  9. WaVPeak: Picking NMR peaks through wavelet-based smoothing and volume-based filtering

    KAUST Repository

    Liu, Zhi

    2012-02-10

    Motivation: Nuclear magnetic resonance (NMR) has been widely used as a powerful tool to determine the 3D structures of proteins in vivo. However, the post-spectra processing stage of NMR structure determination usually involves a tremendous amount of time and expert knowledge, which includes peak picking, chemical shift assignment and structure calculation steps. Detecting accurate peaks from the NMR spectra is a prerequisite for all following steps, and thus remains a key problem in automatic NMR structure determination. Results: We introduce WaVPeak, a fully automatic peak detection method. WaVPeak first smoothes the given NMR spectrum by wavelets. The peaks are then identified as the local maxima. The false positive peaks are filtered out efficiently by considering the volume of the peaks. WaVPeak has two major advantages over the state-of-the-art peak-picking methods. First, through wavelet-based smoothing, WaVPeak does not eliminate any data point in the spectra. Therefore, WaVPeak is able to detect weak peaks that are embedded in the noise level. NMR spectroscopists need the most help isolating these weak peaks. Second, WaVPeak estimates the volume of the peaks to filter the false positives. This is more reliable than intensity-based filters that are widely used in existing methods. We evaluate the performance of WaVPeak on the benchmark set proposed by PICKY (Alipanahi et al., 2009), one of the most accurate methods in the literature. The dataset comprises 32 2D and 3D spectra from eight different proteins. Experimental results demonstrate that WaVPeak achieves an average of 96%, 91%, 88%, 76% and 85% recall on 15N-HSQC, HNCO, HNCA, HNCACB and CBCA(CO)NH, respectively. When the same number of peaks are considered, WaVPeak significantly outperforms PICKY. The Author(s) 2012. Published by Oxford University Press.

  10. Comparison on Integer Wavelet Transforms in Spherical Wavelet Based Image Based Relighting

    Institute of Scientific and Technical Information of China (English)

    WANGZe; LEEYin; LEUNGChising; WONGTientsin; ZHUYisheng

    2003-01-01

    To provide a good quality rendering in the Image based relighting (IBL) system, tremendous reference images under various illumination conditions are needed. Therefore data compression is essential to enable interactive action. And the rendering speed is another crucial consideration for real applications. Based on Spherical wavelet transform (SWT), this paper presents a quick representation method with Integer wavelet transform (IWT) for the IBL system. It focuses on comparison on different IWTs with the Embedded zerotree wavelet (EZW) used in the IBL system. The whole compression procedure contains two major compression steps. Firstly, SWT is applied to consider the correlation among different reference images. Secondly, the SW transformed images are compressed with IWT based image compression approach. Two IWTs are used and good results are showed in the simulations.

  11. Automatic diagnosis of abnormal macula in retinal optical coherence tomography images using wavelet-based convolutional neural network features and random forests classifier

    Science.gov (United States)

    Rasti, Reza; Mehridehnavi, Alireza; Rabbani, Hossein; Hajizadeh, Fedra

    2018-03-01

    The present research intends to propose a fully automatic algorithm for the classification of three-dimensional (3-D) optical coherence tomography (OCT) scans of patients suffering from abnormal macula from normal candidates. The method proposed does not require any denoising, segmentation, retinal alignment processes to assess the intraretinal layers, as well as abnormalities or lesion structures. To classify abnormal cases from the control group, a two-stage scheme was utilized, which consists of automatic subsystems for adaptive feature learning and diagnostic scoring. In the first stage, a wavelet-based convolutional neural network (CNN) model was introduced and exploited to generate B-scan representative CNN codes in the spatial-frequency domain, and the cumulative features of 3-D volumes were extracted. In the second stage, the presence of abnormalities in 3-D OCTs was scored over the extracted features. Two different retinal SD-OCT datasets are used for evaluation of the algorithm based on the unbiased fivefold cross-validation (CV) approach. The first set constitutes 3-D OCT images of 30 normal subjects and 30 diabetic macular edema (DME) patients captured from the Topcon device. The second publicly available set consists of 45 subjects with a distribution of 15 patients in age-related macular degeneration, DME, and normal classes from the Heidelberg device. With the application of the algorithm on overall OCT volumes and 10 repetitions of the fivefold CV, the proposed scheme obtained an average precision of 99.33% on dataset1 as a two-class classification problem and 98.67% on dataset2 as a three-class classification task.

  12. Automatic diagnosis of abnormal macula in retinal optical coherence tomography images using wavelet-based convolutional neural network features and random forests classifier.

    Science.gov (United States)

    Rasti, Reza; Mehridehnavi, Alireza; Rabbani, Hossein; Hajizadeh, Fedra

    2018-03-01

    The present research intends to propose a fully automatic algorithm for the classification of three-dimensional (3-D) optical coherence tomography (OCT) scans of patients suffering from abnormal macula from normal candidates. The method proposed does not require any denoising, segmentation, retinal alignment processes to assess the intraretinal layers, as well as abnormalities or lesion structures. To classify abnormal cases from the control group, a two-stage scheme was utilized, which consists of automatic subsystems for adaptive feature learning and diagnostic scoring. In the first stage, a wavelet-based convolutional neural network (CNN) model was introduced and exploited to generate B-scan representative CNN codes in the spatial-frequency domain, and the cumulative features of 3-D volumes were extracted. In the second stage, the presence of abnormalities in 3-D OCTs was scored over the extracted features. Two different retinal SD-OCT datasets are used for evaluation of the algorithm based on the unbiased fivefold cross-validation (CV) approach. The first set constitutes 3-D OCT images of 30 normal subjects and 30 diabetic macular edema (DME) patients captured from the Topcon device. The second publicly available set consists of 45 subjects with a distribution of 15 patients in age-related macular degeneration, DME, and normal classes from the Heidelberg device. With the application of the algorithm on overall OCT volumes and 10 repetitions of the fivefold CV, the proposed scheme obtained an average precision of 99.33% on dataset1 as a two-class classification problem and 98.67% on dataset2 as a three-class classification task. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

  13. Wavelet-based multiscale window transform and energy and vorticity analysis

    Science.gov (United States)

    Liang, Xiang San

    A new methodology, Multiscale Energy and Vorticity Analysis (MS-EVA), is developed to investigate sub-mesoscale, meso-scale, and large-scale dynamical interactions in geophysical fluid flows which are intermittent in space and time. The development begins with the construction of a wavelet-based functional analysis tool, the multiscale window transform (MWT), which is local, orthonormal, self-similar, and windowed on scale. The MWT is first built over the real line then modified onto a finite domain. Properties are explored, the most important one being the property of marginalization which brings together a quadratic quantity in physical space with its phase space representation. Based on MWT the MS-EVA is developed. Energy and enstrophy equations for the large-, meso-, and sub-meso-scale windows are derived and their terms interpreted. The processes thus represented are classified into four categories: transport; transfer, conversion, and dissipation/diffusion. The separation of transport from transfer is made possible with the introduction of the concept of perfect transfer. By the property of marginalization, the classical energetic analysis proves to be a particular case of the MS-EVA. The MS-EVA developed is validated with classical instability problems. The validation is carried out through two steps. First, it is established that the barotropic and baroclinic instabilities are indicated by the spatial averages of certain transfer term interaction analyses. Then calculations of these indicators are made with an Eady model and a Kuo model. The results agree precisely with what is expected from their analytical solutions, and the energetics reproduced reveal a consistent and important aspect of the unknown dynamic structures of instability processes. As an application, the MS-EVA is used to investigate the Iceland-Faeroe frontal (IFF) variability. A MS-EVA-ready dataset is first generated, through a forecasting study with the Harvard Ocean Prediction System

  14. Wavelet-based multi-resolution analysis and artificial neural networks for forecasting temperature and thermal power consumption

    OpenAIRE

    Eynard , Julien; Grieu , Stéphane; Polit , Monique

    2011-01-01

    15 pages; International audience; As part of the OptiEnR research project, the present paper deals with outdoor temperature and thermal power consumption forecasting. This project focuses on optimizing the functioning of a multi-energy district boiler (La Rochelle, west coast of France), adding to the plant a thermal storage unit and implementing a model-based predictive controller. The proposed short-term forecast method is based on the concept of time series and uses both a wavelet-based mu...

  15. Real-time wavelet-based inline banknote-in-bundle counting for cut-and-bundle machines

    Science.gov (United States)

    Petker, Denis; Lohweg, Volker; Gillich, Eugen; Türke, Thomas; Willeke, Harald; Lochmüller, Jens; Schaede, Johannes

    2011-03-01

    Automatic banknote sheet cut-and-bundle machines are widely used within the scope of banknote production. Beside the cutting-and-bundling, which is a mature technology, image-processing-based quality inspection for this type of machine is attractive. We present in this work a new real-time Touchless Counting and perspective cutting blade quality insurance system, based on a Color-CCD-Camera and a dual-core Computer, for cut-and-bundle applications in banknote production. The system, which applies Wavelet-based multi-scale filtering is able to count banknotes inside a 100-bundle within 200-300 ms depending on the window size.

  16. Effect of Interleaved FEC Code on Wavelet Based MC-CDMA System with Alamouti STBC in Different Modulation Schemes

    OpenAIRE

    Shams, Rifat Ara; Kabir, M. Hasnat; Ullah, Sheikh Enayet

    2012-01-01

    In this paper, the impact of Forward Error Correction (FEC) code namely Trellis code with interleaver on the performance of wavelet based MC-CDMA wireless communication system with the implementation of Alamouti antenna diversity scheme has been investigated in terms of Bit Error Rate (BER) as a function of Signal-to-Noise Ratio (SNR) per bit. Simulation of the system under proposed study has been done in M-ary modulation schemes (MPSK, MQAM and DPSK) over AWGN and Rayleigh fading channel inc...

  17. Algorithms

    Indian Academy of Sciences (India)

    ticians but also forms the foundation of computer science. Two ... with methods of developing algorithms for solving a variety of problems but ... applications of computers in science and engineer- ... numerical calculus are as important. We will ...

  18. Wavelet-based multiscale analysis of minimum toe clearance variability in the young and elderly during walking.

    Science.gov (United States)

    Khandoker, Ahsan H; Karmakar, Chandan K; Begg, Rezaul K; Palaniswami, Marimuthu

    2007-01-01

    As humans age or are influenced by pathology of the neuromuscular system, gait patterns are known to adjust, accommodating for reduced function in the balance control system. The aim of this study was to investigate the effectiveness of a wavelet based multiscale analysis of a gait variable [minimum toe clearance (MTC)] in deriving indexes for understanding age-related declines in gait performance and screening of balance impairments in the elderly. MTC during walking on a treadmill for 30 healthy young, 27 healthy elderly and 10 falls risk elderly subjects with a history of tripping falls were analyzed. The MTC signal from each subject was decomposed to eight detailed signals at different wavelet scales by using the discrete wavelet transform. The variances of detailed signals at scales 8 to 1 were calculated. The multiscale exponent (beta) was then estimated from the slope of the variance progression at successive scales. The variance at scale 5 was significantly (ppathological conditions. Early detection of gait pattern changes due to ageing and balance impairments using wavelet-based multiscale analysis might provide the opportunity to initiate preemptive measures to be undertaken to avoid injurious falls.

  19. Accelerating Wavelet-Based Video Coding on Graphics Hardware using CUDA

    NARCIS (Netherlands)

    Laan, Wladimir J. van der; Roerdink, Jos B.T.M.; Jalba, Andrei C.; Zinterhof, P; Loncaric, S; Uhl, A; Carini, A

    2009-01-01

    The Discrete Wavelet Transform (DWT) has a wide range of applications from signal processing to video and image compression. This transform, by means of the lifting scheme, can be performed in a memory mid computation efficient way on modern, programmable GPUs, which can be regarded as massively

  20. Accelerating wavelet-based video coding on graphics hardware using CUDA

    NARCIS (Netherlands)

    Laan, van der W.J.; Roerdink, J.B.T.M.; Jalba, A.C.; Zinterhof, P.; Loncaric, S.; Uhl, A.; Carini, A.

    2009-01-01

    The DiscreteWavelet Transform (DWT) has a wide range of applications from signal processing to video and image compression. This transform, by means of the lifting scheme, can be performed in a memory and computation efficient way on modern, programmable GPUs, which can be regarded as massively

  1. Design of Compressed Sensing Algorithm for Coal Mine IoT Moving Measurement Data Based on a Multi-Hop Network and Total Variation

    Directory of Open Access Journals (Sweden)

    Gang Wang

    2018-05-01

    Full Text Available As the application of a coal mine Internet of Things (IoT, mobile measurement devices, such as intelligent mine lamps, cause moving measurement data to be increased. How to transmit these large amounts of mobile measurement data effectively has become an urgent problem. This paper presents a compressed sensing algorithm for the large amount of coal mine IoT moving measurement data based on a multi-hop network and total variation. By taking gas data in mobile measurement data as an example, two network models for the transmission of gas data flow, namely single-hop and multi-hop transmission modes, are investigated in depth, and a gas data compressed sensing collection model is built based on a multi-hop network. To utilize the sparse characteristics of gas data, the concept of total variation is introduced and a high-efficiency gas data compression and reconstruction method based on Total Variation Sparsity based on Multi-Hop (TVS-MH is proposed. According to the simulation results, by using the proposed method, the moving measurement data flow from an underground distributed mobile network can be acquired and transmitted efficiently.

  2. Design of Compressed Sensing Algorithm for Coal Mine IoT Moving Measurement Data Based on a Multi-Hop Network and Total Variation.

    Science.gov (United States)

    Wang, Gang; Zhao, Zhikai; Ning, Yongjie

    2018-05-28

    As the application of a coal mine Internet of Things (IoT), mobile measurement devices, such as intelligent mine lamps, cause moving measurement data to be increased. How to transmit these large amounts of mobile measurement data effectively has become an urgent problem. This paper presents a compressed sensing algorithm for the large amount of coal mine IoT moving measurement data based on a multi-hop network and total variation. By taking gas data in mobile measurement data as an example, two network models for the transmission of gas data flow, namely single-hop and multi-hop transmission modes, are investigated in depth, and a gas data compressed sensing collection model is built based on a multi-hop network. To utilize the sparse characteristics of gas data, the concept of total variation is introduced and a high-efficiency gas data compression and reconstruction method based on Total Variation Sparsity based on Multi-Hop (TVS-MH) is proposed. According to the simulation results, by using the proposed method, the moving measurement data flow from an underground distributed mobile network can be acquired and transmitted efficiently.

  3. Evaluation of the image quality in digital breast tomosynthesis (DBT) employed with a compressed-sensing (CS)-based reconstruction algorithm by using the mammographic accreditation phantom

    Energy Technology Data Exchange (ETDEWEB)

    Park, Yeonok; Cho, Heemoon; Je, Uikyu; Cho, Hyosung, E-mail: hscho1@yonsei.ac.kr; Park, Chulkyu; Lim, Hyunwoo; Kim, Kyuseok; Kim, Guna; Park, Soyoung; Woo, Taeho; Choi, Sungil

    2015-12-21

    In this work, we have developed a prototype digital breast tomosynthesis (DBT) system which mainly consists of an x-ray generator (28 kV{sub p}, 7 mA s), a CMOS-type flat-panel detector (70-μm pixel size, 230.5×339 mm{sup 2} active area), and a rotational arm to move the x-ray generator in an arc. We employed a compressed-sensing (CS)-based reconstruction algorithm, rather than a common filtered-backprojection (FBP) one, for more accurate DBT reconstruction. Here the CS is a state-of-the-art mathematical theory for solving the inverse problems, which exploits the sparsity of the image with substantially high accuracy. We evaluated the reconstruction quality in terms of the detectability, the contrast-to-noise ratio (CNR), and the slice-sensitive profile (SSP) by using the mammographic accreditation phantom (Model 015, CIRS Inc.) and compared it to the FBP-based quality. The CS-based algorithm yielded much better image quality, preserving superior image homogeneity, edge sharpening, and cross-plane resolution, compared to the FBP-based one. - Highlights: • A prototype digital breast tomosynthesis (DBT) system is developed. • Compressed-sensing (CS) based reconstruction framework is employed. • We reconstructed high-quality DBT images by using the proposed reconstruction framework.

  4. Algorithms

    Indian Academy of Sciences (India)

    algorithm design technique called 'divide-and-conquer'. One of ... Turtle graphics, September. 1996. 5. ... whole list named 'PO' is a pointer to the first element of the list; ..... Program for computing matrices X and Y and placing the result in C *).

  5. Algorithms

    Indian Academy of Sciences (India)

    algorithm that it is implicitly understood that we know how to generate the next natural ..... Explicit comparisons are made in line (1) where maximum and minimum is ... It can be shown that the function T(n) = 3/2n -2 is the solution to the above ...

  6. Algorithms

    Indian Academy of Sciences (India)

    will become clear in the next article when we discuss a simple logo like programming language. ... Rod B may be used as an auxiliary store. The problem is to find an algorithm which performs this task. ... No disks are moved from A to Busing C as auxiliary rod. • move _disk (A, C);. (No + l)th disk is moved from A to C directly ...

  7. Heart Rate Variability and Wavelet-based Studies on ECG Signals from Smokers and Non-smokers

    Science.gov (United States)

    Pal, K.; Goel, R.; Champaty, B.; Samantray, S.; Tibarewala, D. N.

    2013-12-01

    The current study deals with the heart rate variability (HRV) and wavelet-based ECG signal analysis of smokers and non-smokers. The results of HRV indicated dominance towards the sympathetic nervous system activity in smokers. The heart rate was found to be higher in case of smokers as compared to non-smokers ( p smokers from the non-smokers. The results indicated that when RMSSD, SD1 and RR-mean features were used concurrently a classification efficiency of > 90 % was achieved. The wavelet decomposition of the ECG signal was done using the Daubechies (db 6) wavelet family. No difference was observed between the smokers and non-smokers which apparently suggested that smoking does not affect the conduction pathway of heart.

  8. A wavelet-based evaluation of time-varying long memory of equity markets: A paradigm in crisis

    Science.gov (United States)

    Tan, Pei P.; Chin, Cheong W.; Galagedera, Don U. A.

    2014-09-01

    This study, using wavelet-based method investigates the dynamics of long memory in the returns and volatility of equity markets. In the sample of five developed and five emerging markets we find that the daily return series from January 1988 to June 2013 may be considered as a mix of weak long memory and mean-reverting processes. In the case of volatility in the returns, there is evidence of long memory, which is stronger in emerging markets than in developed markets. We find that although the long memory parameter may vary during crisis periods (1997 Asian financial crisis, 2001 US recession and 2008 subprime crisis) the direction of change may not be consistent across all equity markets. The degree of return predictability is likely to diminish during crisis periods. Robustness of the results is checked with de-trended fluctuation analysis approach.

  9. A Sequential, Implicit, Wavelet-Based Solver for Multi-Scale Time-Dependent Partial Differential Equations

    Directory of Open Access Journals (Sweden)

    Donald A. McLaren

    2013-04-01

    Full Text Available This paper describes and tests a wavelet-based implicit numerical method for solving partial differential equations. Intended for problems with localized small-scale interactions, the method exploits the form of the wavelet decomposition to divide the implicit system created by the time-discretization into multiple smaller systems that can be solved sequentially. Included is a test on a basic non-linear problem, with both the results of the test, and the time required to calculate them, compared with control results based on a single system with fine resolution. The method is then tested on a non-trivial problem, its computational time and accuracy checked against control results. In both tests, it was found that the method requires less computational expense than the control. Furthermore, the method showed convergence towards the fine resolution control results.

  10. Development and Application of New Algorithms for the Simulation of Viscous Compressible Flows with Moving Bodies in Three Dimensions.

    Science.gov (United States)

    1996-12-01

    Internacional de M6todos Numericos en Ingenieria (CIMNE) at the Universidad Polit6cnica de Catalunya. Barcelona, Spain. The support for this visit is...machines. The main inno- vation consisted of new data structures to handle the compatibility of refinement and de -refinement cases allowed [10]. For this...from the discretization of the complete problem. The advantage of this new algorithm is that it allows a cost effective re-use of existing software , with

  11. Demonstration of Inexact Computing Implemented in the JPEG Compression Algorithm using Probabilistic Boolean Logic applied to CMOS Components

    Science.gov (United States)

    2015-12-24

    manufacturing today (namely, the 14nm FinFET silicon CMOS technology). The JPEG algorithm is selected as a motivational example since it is widely...TIFF images of a U.S. Air Force F-16 aircraft provided by the University of Southern California Signal and Image Processing Institute (SIPI) image...silicon CMOS technology currently in high volume manufac- turing today (the 14 nm FinFET silicon CMOS technology). The main contribution of this

  12. Wavelet-based higher-order neural networks for mine detection in thermal IR imagery

    Science.gov (United States)

    Baertlein, Brian A.; Liao, Wen-Jiao

    2000-08-01

    An image processing technique is described for the detection of miens in RI imagery. The proposed technique is based on a third-order neural network, which processes the output of a wavelet packet transform. The technique is inherently invariant to changes in signature position, rotation and scaling. The well-known memory limitations that arise with higher-order neural networks are addressed by (1) the data compression capabilities of wavelet packets, (2) protections of the image data into a space of similar triangles, and (3) quantization of that 'triangle space'. Using these techniques, image chips of size 28 by 28, which would require 0(109) neural net weights, are processed by a network having 0(102) weights. ROC curves are presented for mine detection in real and simulated imagery.

  13. Signal Separation of Helicopter Radar Returns Using Wavelet-Based Sparse Signal Optimisation

    Science.gov (United States)

    2016-10-01

    helicopter from the composite radar returns. The received signal consists of returns from the rotating main and tail rotor blades, the helicopter body...is used to separate the main and tail rotor blade components of a helicopter from the composite radar returns. The received signal consists of returns...Two algorithms are presented in the report to separately extract main rotor blade returns and tail rotor blade returns from the composite signal

  14. Wavelet-Based Feature Extraction in Fault Diagnosis for Biquad High-Pass Filter Circuit

    OpenAIRE

    Yuehai Wang; Yongzheng Yan; Qinyong Wang

    2016-01-01

    Fault diagnosis for analog circuit has become a prominent factor in improving the reliability of integrated circuit due to its irreplaceability in modern integrated circuits. In fact fault diagnosis based on intelligent algorithms has become a popular research topic as efficient feature extraction and selection are a critical and intricate task in analog fault diagnosis. Further, it is extremely important to propose some general guidelines for the optimal feature extraction and selection. In ...

  15. Prediction of crack growth direction by Strain Energy Sih's Theory on specimens SEN under tension-compression biaxial loading employing Genetic Algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Rodriguez-MartInez R; Lugo-Gonzalez E; Urriolagoitia-Calderon G; Urriolagoitia-Sosa G; Hernandez-Gomez L H; Romero-Angeles B; Torres-San Miguel Ch, E-mail: rrodriguezm@ipn.mx, E-mail: urrio332@hotmail.com, E-mail: guiurri@hotmail.com, E-mail: luishector56@hotmail.com, E-mail: romerobeatriz98@hotmail.com, E-mail: napor@hotmail.com [INSTITUTO POLITECNICO NACIONAL Seccion de Estudios de Posgrado e Investigacion (SEPI), Escuela Superior de Ingenieria Mecanica y Electrica (ESIME), Edificio 5. 2do Piso, Unidad Profesional Adolfo Lopez Mateos ' Zacatenco' Col. Lindavista, C.P. 07738, Mexico, D.F. (Mexico)

    2011-07-19

    Crack growth direction has been studied in many ways. Particularly Sih's strain energy theory predicts that a fracture under a three-dimensional state of stress spreads in direction of the minimum strain energy density. In this work a study for angle of fracture growth was made, considering a biaxial stress state at the crack tip on SEN specimens. The stress state applied on a tension-compression SEN specimen is biaxial one on crack tip, as it can observed in figure 1. A solution method proposed to obtain a mathematical model considering genetic algorithms, which have demonstrated great capacity for the solution of many engineering problems. From the model given by Sih one can deduce the density of strain energy stored for unit of volume at the crack tip as dW = [1/2E({sigma}{sup 2}{sub x} + {sigma}{sup 2}{sub y}) - {nu}/E({sigma}{sub x}{sigma}{sub y})]dV (1). From equation (1) a mathematical deduction to solve in terms of {theta} of this case was developed employing Genetic Algorithms, where {theta} is a crack propagation direction in plane x-y. Steel and aluminium mechanical properties to modelled specimens were employed, because they are two of materials but used in engineering design. Obtained results show stable zones of fracture propagation but only in a range of applied loading.

  16. Prediction of crack growth direction by Strain Energy Sih's Theory on specimens SEN under tension-compression biaxial loading employing Genetic Algorithms

    International Nuclear Information System (INIS)

    Rodriguez-MartInez R; Lugo-Gonzalez E; Urriolagoitia-Calderon G; Urriolagoitia-Sosa G; Hernandez-Gomez L H; Romero-Angeles B; Torres-San Miguel Ch

    2011-01-01

    Crack growth direction has been studied in many ways. Particularly Sih's strain energy theory predicts that a fracture under a three-dimensional state of stress spreads in direction of the minimum strain energy density. In this work a study for angle of fracture growth was made, considering a biaxial stress state at the crack tip on SEN specimens. The stress state applied on a tension-compression SEN specimen is biaxial one on crack tip, as it can observed in figure 1. A solution method proposed to obtain a mathematical model considering genetic algorithms, which have demonstrated great capacity for the solution of many engineering problems. From the model given by Sih one can deduce the density of strain energy stored for unit of volume at the crack tip as dW = [1/2E(σ 2 x + σ 2 y ) - ν/E(σ x σy)]dV (1). From equation (1) a mathematical deduction to solve in terms of θ of this case was developed employing Genetic Algorithms, where θ is a crack propagation direction in plane x-y. Steel and aluminium mechanical properties to modelled specimens were employed, because they are two of materials but used in engineering design. Obtained results show stable zones of fracture propagation but only in a range of applied loading.

  17. Speech Data Compression using Vector Quantization

    OpenAIRE

    H. B. Kekre; Tanuja K. Sarode

    2008-01-01

    Mostly transforms are used for speech data compressions which are lossy algorithms. Such algorithms are tolerable for speech data compression since the loss in quality is not perceived by the human ear. However the vector quantization (VQ) has a potential to give more data compression maintaining the same quality. In this paper we propose speech data compression algorithm using vector quantization technique. We have used VQ algorithms LBG, KPE and FCG. The results table s...

  18. 3D Inversion of Magnetic Data through Wavelet based Regularization Method

    Directory of Open Access Journals (Sweden)

    Maysam Abedi

    2015-06-01

    Full Text Available This study deals with the 3D recovering of magnetic susceptibility model by incorporating the sparsity-based constraints in the inversion algorithm. For this purpose, the area under prospect was divided into a large number of rectangular prisms in a mesh with unknown susceptibilities. Tikhonov cost functions with two sparsity functions were used to recover the smooth parts as well as the sharp boundaries of model parameters. A pre-selected basis namely wavelet can recover the region of smooth behaviour of susceptibility distribution while Haar or finite-difference (FD domains yield a solution with rough boundaries. Therefore, a regularizer function which can benefit from the advantages of both wavelets and Haar/FD operators in representation of the 3D magnetic susceptibility distributionwas chosen as a candidate for modeling magnetic anomalies. The optimum wavelet and parameter β which controls the weight of the two sparsifying operators were also considered. The algorithm assumed that there was no remanent magnetization and observed that magnetometry data represent only induced magnetization effect. The proposed approach is applied to a noise-corrupted synthetic data in order to demonstrate its suitability for 3D inversion of magnetic data. On obtaining satisfactory results, a case study pertaining to the ground based measurement of magnetic anomaly over a porphyry-Cu deposit located in Kerman providence of Iran. Now Chun deposit was presented to be 3D inverted. The low susceptibility in the constructed model coincides with the known location of copper ore mineralization.

  19. Stabilized Conservative Level Set Method with Adaptive Wavelet-based Mesh Refinement

    Science.gov (United States)

    Shervani-Tabar, Navid; Vasilyev, Oleg V.

    2016-11-01

    This paper addresses one of the main challenges of the conservative level set method, namely the ill-conditioned behavior of the normal vector away from the interface. An alternative formulation for reconstruction of the interface is proposed. Unlike the commonly used methods which rely on the unit normal vector, Stabilized Conservative Level Set (SCLS) uses a modified renormalization vector with diminishing magnitude away from the interface. With the new formulation, in the vicinity of the interface the reinitialization procedure utilizes compressive flux and diffusive terms only in the normal direction to the interface, thus, preserving the conservative level set properties, while away from the interfaces the directional diffusion mechanism automatically switches to homogeneous diffusion. The proposed formulation is robust and general. It is especially well suited for use with adaptive mesh refinement (AMR) approaches due to need for a finer resolution in the vicinity of the interface in comparison with the rest of the domain. All of the results were obtained using the Adaptive Wavelet Collocation Method, a general AMR-type method, which utilizes wavelet decomposition to adapt on steep gradients in the solution while retaining a predetermined order of accuracy.

  20. Wavelet based analysis of multi-electrode EEG-signals in epilepsy

    Science.gov (United States)

    Hein, Daniel A.; Tetzlaff, Ronald

    2005-06-01

    For many epilepsy patients seizures cannot sufficiently be controlled by an antiepileptic pharmacatherapy. Furthermore, only in small number of cases a surgical treatment may be possible. The aim of this work is to contribute to the realization of an implantable seizure warning device. By using recordings of electroenzephalographical(EEG) signals obtained from the department of epileptology of the University of Bonn we studied a recently proposed algorithm for the detection of parameter changes in nonlinear systems. Firstly, after calculating the crosscorrelation function between the signals of two electrodes near the epileptic focus, a wavelet-analysis follows using a sliding window with the so called Mexican-Hat wavelet. Then the Shannon-Entropy of the wavelet-transformed data has been determined providing the information content on a time scale in subject to the dilation of the wavelet-transformation. It shows distinct changes at the seizure onset for all dilations and for all patients.

  1. Wavelet Based Denoising for the Estimation of the State of Charge for Lithium-Ion Batteries

    Directory of Open Access Journals (Sweden)

    Xiao Wang

    2018-05-01

    Full Text Available In practical electric vehicle applications, the noise of original discharging/charging voltage (DCV signals are inevitable, which comes from electromagnetic interference and the measurement noise of the sensors. To solve such problems, the Discrete Wavelet Transform (DWT based state of charge (SOC estimation method is proposed in this paper. Through a multi-resolution analysis, the original DCV signals with noise are decomposed into different frequency sub-bands. The desired de-noised DCV signals are then reconstructed by utilizing the inverse discrete wavelet transform, based on the sure rule. With the de-noised DCV signal, the SOC and the parameters are obtained using the adaptive extended Kalman Filter algorithm, and the adaptive forgetting factor recursive least square method. Simulation and experimental results show that the SOC estimation error is less than 1%, which indicates an effective improvement in SOC estimation accuracy.

  2. Multilayer densities using a wavelet-based gravity method and their tectonic implications beneath the Tibetan Plateau

    Science.gov (United States)

    Xu, Chuang; Luo, Zhicai; Sun, Rong; Zhou, Hao; Wu, Yihao

    2018-06-01

    Determining density structure of the Tibetan Plateau is helpful in better understanding of tectonic structure and development. Seismic method, as traditional approach obtaining a large number of achievements of density structure in the Tibetan Plateau except in the centre and west, is primarily inhibited by the poor seismic station coverage. As the implementation of satellite gravity missions, gravity method is more competitive because of global homogeneous gravity coverage. In this paper, a novel wavelet-based gravity method with high computation efficiency and excellent local identification capability is developed to determine multilayer densities beneath the Tibetan Plateau. The inverted six-layer densities from 0 to 150 km depth can reveal rich tectonic structure and development of study area: (1) The densities present a clockwise pattern, nearly east-west high-low alternating pattern in the west and nearly south-north high-low alternating pattern in the east, which is almost perpendicular to surface movement direction relative to the stable Eurasia from the Global Positioning System velocity field; (2) Apparent fold structure approximately from 10 to 110 km depth can be inferred from the multilayer densities, the deformational direction of which is nearly south-north in the west and east-west in the east; (3) Possible channel flows approximately from 30 to 110 km depth can also be observed clearly during the multilayer densities. Moreover, the inverted multilayer densities are in agreement with previous studies, which verify the correctness and effectiveness of our method.

  3. Wavelet-based study of valence-arousal model of emotions on EEG signals with LabVIEW.

    Science.gov (United States)

    Guzel Aydin, Seda; Kaya, Turgay; Guler, Hasan

    2016-06-01

    This paper illustrates the wavelet-based feature extraction for emotion assessment using electroencephalogram (EEG) signal through graphical coding design. Two-dimensional (valence-arousal) emotion model was studied. Different emotions (happy, joy, melancholy, and disgust) were studied for assessment. These emotions were stimulated by video clips. EEG signals obtained from four subjects were decomposed into five frequency bands (gamma, beta, alpha, theta, and delta) using "db5" wavelet function. Relative features were calculated to obtain further information. Impact of the emotions according to valence value was observed to be optimal on power spectral density of gamma band. The main objective of this work is not only to investigate the influence of the emotions on different frequency bands but also to overcome the difficulties in the text-based program. This work offers an alternative approach for emotion evaluation through EEG processing. There are a number of methods for emotion recognition such as wavelet transform-based, Fourier transform-based, and Hilbert-Huang transform-based methods. However, the majority of these methods have been applied with the text-based programming languages. In this study, we proposed and implemented an experimental feature extraction with graphics-based language, which provides great convenience in bioelectrical signal processing.

  4. Multilayer Densities Using a Wavelet-based Gravity Method and Their Tectonic Implications beneath the Tibetan Plateau

    Science.gov (United States)

    Xu, Chuang; Luo, Zhicai; Sun, Rong; Zhou, Hao; Wu, Yihao

    2018-03-01

    Determining density structure of the Tibetan Plateau is helpful in better understanding tectonic structure and development. Seismic method, as traditional approach obtaining a large number of achievements of density structure in the Tibetan Plateau except in the center and west, is primarily inhibited by the poor seismic station coverage. As the implementation of satellite gravity missions, gravity method is more competitive because of global homogeneous gravity coverage. In this paper, a novel wavelet-based gravity method with high computation efficiency and excellent local identification capability is developed to determine multilayer densities beneath the Tibetan Plateau. The inverted 6-layer densities from 0 km to 150 km depth can reveal rich tectonic structure and development of study area: (1) The densities present a clockwise pattern, nearly east-west high-low alternating pattern in the west and nearly south-north high-low alternating pattern in the east, which is almost perpendicular to surface movement direction relative to the stable Eurasia from the Global Positioning System velocity field; (2) Apparent fold structure approximately from 10 km to 110 km depth can be inferred from the multilayer densities, the deformational direction of which is nearly south-north in the west and east-west in the east; (3) Possible channel flows approximately from 30 km to 110 km depth can be also observed clearly during the multilayer densities. Moreover, the inverted multilayer densities are in agreement with previous studies, which verify the correctness and effectiveness of our method.

  5. Enhancement of Tropical Land Cover Mapping with Wavelet-Based Fusion and Unsupervised Clustering of SAR and Landsat Image Data

    Science.gov (United States)

    LeMoigne, Jacqueline; Laporte, Nadine; Netanyahuy, Nathan S.; Zukor, Dorothy (Technical Monitor)

    2001-01-01

    The characterization and the mapping of land cover/land use of forest areas, such as the Central African rainforest, is a very complex task. This complexity is mainly due to the extent of such areas and, as a consequence, to the lack of full and continuous cloud-free coverage of those large regions by one single remote sensing instrument, In order to provide improved vegetation maps of Central Africa and to develop forest monitoring techniques for applications at the local and regional scales, we propose to utilize multi-sensor remote sensing observations coupled with in-situ data. Fusion and clustering of multi-sensor data are the first steps towards the development of such a forest monitoring system. In this paper, we will describe some preliminary experiments involving the fusion of SAR and Landsat image data of the Lope Reserve in Gabon. Similarly to previous fusion studies, our fusion method is wavelet-based. The fusion provides a new image data set which contains more detailed texture features and preserves the large homogeneous regions that are observed by the Thematic Mapper sensor. The fusion step is followed by unsupervised clustering and provides a vegetation map of the area.

  6. Proposing Wavelet-Based Low-Pass Filter and Input Filter to Improve Transient Response of Grid-Connected Photovoltaic Systems

    Directory of Open Access Journals (Sweden)

    Bijan Rahmani

    2016-08-01

    Full Text Available Available photovoltaic (PV systems show a prolonged transient response, when integrated into the power grid via active filters. On one hand, the conventional low-pass filter, employed within the integrated PV system, works with a large delay, particularly in the presence of system’s low-order harmonics. On the other hand, the switching of the DC (direct current–DC converters within PV units also prolongs the transient response of an integrated system, injecting harmonics and distortion through the PV-end current. This paper initially develops a wavelet-based low-pass filter to improve the transient response of the interconnected PV systems to grid lines. Further, a damped input filter is proposed within the PV system to address the raised converter’s switching issue. Finally, Matlab/Simulink simulations validate the effectiveness of the proposed wavelet-based low-pass filter and damped input filter within an integrated PV system.

  7. Pigmented skin lesion detection using random forest and wavelet-based texture

    Science.gov (United States)

    Hu, Ping; Yang, Tie-jun

    2016-10-01

    The incidence of cutaneous malignant melanoma, a disease of worldwide distribution and is the deadliest form of skin cancer, has been rapidly increasing over the last few decades. Because advanced cutaneous melanoma is still incurable, early detection is an important step toward a reduction in mortality. Dermoscopy photographs are commonly used in melanoma diagnosis and can capture detailed features of a lesion. A great variability exists in the visual appearance of pigmented skin lesions. Therefore, in order to minimize the diagnostic errors that result from the difficulty and subjectivity of visual interpretation, an automatic detection approach is required. The objectives of this paper were to propose a hybrid method using random forest and Gabor wavelet transformation to accurately differentiate which part belong to lesion area and the other is not in a dermoscopy photographs and analyze segmentation accuracy. A random forest classifier consisting of a set of decision trees was used for classification. Gabor wavelets transformation are the mathematical model of visual cortical cells of mammalian brain and an image can be decomposed into multiple scales and multiple orientations by using it. The Gabor function has been recognized as a very useful tool in texture analysis, due to its optimal localization properties in both spatial and frequency domain. Texture features based on Gabor wavelets transformation are found by the Gabor filtered image. Experiment results indicate the following: (1) the proposed algorithm based on random forest outperformed the-state-of-the-art in pigmented skin lesions detection (2) and the inclusion of Gabor wavelet transformation based texture features improved segmentation accuracy significantly.

  8. Compressed sensing & sparse filtering

    CERN Document Server

    Carmi, Avishy Y; Godsill, Simon J

    2013-01-01

    This book is aimed at presenting concepts, methods and algorithms ableto cope with undersampled and limited data. One such trend that recently gained popularity and to some extent revolutionised signal processing is compressed sensing. Compressed sensing builds upon the observation that many signals in nature are nearly sparse (or compressible, as they are normally referred to) in some domain, and consequently they can be reconstructed to within high accuracy from far fewer observations than traditionally held to be necessary. Apart from compressed sensing this book contains other related app

  9. LZ-Compressed String Dictionaries

    OpenAIRE

    Arz, Julian; Fischer, Johannes

    2013-01-01

    We show how to compress string dictionaries using the Lempel-Ziv (LZ78) data compression algorithm. Our approach is validated experimentally on dictionaries of up to 1.5 GB of uncompressed text. We achieve compression ratios often outperforming the existing alternatives, especially on dictionaries containing many repeated substrings. Our query times remain competitive.

  10. On Normalized Compression Distance and Large Malware

    OpenAIRE

    Borbely, Rebecca Schuller

    2015-01-01

    Normalized Compression Distance (NCD) is a popular tool that uses compression algorithms to cluster and classify data in a wide range of applications. Existing discussions of NCD's theoretical merit rely on certain theoretical properties of compression algorithms. However, we demonstrate that many popular compression algorithms don't seem to satisfy these theoretical properties. We explore the relationship between some of these properties and file size, demonstrating that this theoretical pro...

  11. Radiological Image Compression

    Science.gov (United States)

    Lo, Shih-Chung Benedict

    The movement toward digital images in radiology presents the problem of how to conveniently and economically store, retrieve, and transmit the volume of digital images. Basic research into image data compression is necessary in order to move from a film-based department to an efficient digital -based department. Digital data compression technology consists of two types of compression technique: error-free and irreversible. Error -free image compression is desired; however, present techniques can only achieve compression ratio of from 1.5:1 to 3:1, depending upon the image characteristics. Irreversible image compression can achieve a much higher compression ratio; however, the image reconstructed from the compressed data shows some difference from the original image. This dissertation studies both error-free and irreversible image compression techniques. In particular, some modified error-free techniques have been tested and the recommended strategies for various radiological images are discussed. A full-frame bit-allocation irreversible compression technique has been derived. A total of 76 images which include CT head and body, and radiographs digitized to 2048 x 2048, 1024 x 1024, and 512 x 512 have been used to test this algorithm. The normalized mean -square-error (NMSE) on the difference image, defined as the difference between the original and the reconstructed image from a given compression ratio, is used as a global measurement on the quality of the reconstructed image. The NMSE's of total of 380 reconstructed and 380 difference images are measured and the results tabulated. Three complex compression methods are also suggested to compress images with special characteristics. Finally, various parameters which would effect the quality of the reconstructed images are discussed. A proposed hardware compression module is given in the last chapter.

  12. Compressed sensing along physically plausible sampling trajectories in MRI

    International Nuclear Information System (INIS)

    Chauffert, Nicolas

    2015-01-01

    Magnetic Resonance Imaging (MRI) is a non-invasive and non-ionizing imaging technique that provides images of body tissues, using the contrast sensitivity coming from the magnetic parameters (T_1, T_2 and proton density). Data are acquired in the κ-space, corresponding to spatial Fourier frequencies. Because of physical constraints, the displacement in the κ-space is subject to kinematic constraints. Indeed, magnetic field gradients and their temporal derivative are upper bounded. Hence, the scanning time increases with the image resolution. Decreasing scanning time is crucial to improve patient comfort, decrease exam costs, limit the image distortions (eg, created by the patient movement), or decrease temporal resolution in functional MRI. Reducing scanning time can be addressed by Compressed Sensing (CS) theory. The latter is a technique that guarantees the perfect recovery of an image from under sampled data in κ-space, by assuming that the image is sparse in a wavelet basis. Unfortunately, CS theory cannot be directly cast to the MRI setting. The reasons are: i) acquisition (Fourier) and representation (wavelets) bases are coherent and ii) sampling schemes obtained using CS theorems are composed of isolated measurements and cannot be realistically implemented by magnetic field gradients: the sampling is usually performed along continuous or more regular curves. However, heuristic application of CS in MRI has provided promising results. In this thesis, we aim to develop theoretical tools to apply CS to MRI and other modalities. On the one hand, we propose a variable density sampling theory to answer the first impediment. The more the sample contains information, the more it is likely to be drawn. On the other hand, we propose sampling schemes and design sampling trajectories that fulfill acquisition constraints, while traversing the κ-space with the sampling density advocated by the theory. The second point is complex and is thus addressed step by step

  13. An assessment study of the wavelet-based index of magnetic storm activity (WISA) and its comparison to the Dst index

    Science.gov (United States)

    Xu, Zhonghua; Zhu, Lie; Sojka, Jan; Kokoszka, Piotr; Jach, Agnieszka

    2008-08-01

    A wavelet-based index of storm activity (WISA) has been recently developed [Jach, A., Kokoszka, P., Sojka, L., Zhu, L., 2006. Wavelet-based index of magnetic storm activity. Journal of Geophysical Research 111, A09215, doi:10.1029/2006JA011635] to complement the traditional Dst index. The new index can be computed automatically by using the wavelet-based statistical procedure without human intervention on the selection of quiet days and the removal of secular variations. In addition, the WISA is flexible on data stretch and has a higher temporal resolution (1 min), which can provide a better description of the dynamical variations of magnetic storms. In this work, we perform a systematic assessment study on the WISA index. First, we statistically compare the WISA to the Dst for various quiet and disturbed periods and analyze the differences of their spectral features. Then we quantitatively assess the flexibility of the WISA on data stretch and study the effects of varying number of stations on the index. In addition, the ability of the WISA for handling the missing data is also quantitatively assessed. The assessment results show that the hourly averaged WISA index can describe storm activities equally well as the Dst index, but its full automation, high flexibility on data stretch, easiness of using the data from varying number of stations, high temporal resolution, and high tolerance to missing data from individual station can be very valuable and essential for real-time monitoring of the dynamical variations of magnetic storm activities and space weather applications, thus significantly complementing the existing Dst index.

  14. A deblocking algorithm based on color psychology for display quality enhancement

    Science.gov (United States)

    Yeh, Chia-Hung; Tseng, Wen-Yu; Huang, Kai-Lin

    2012-12-01

    This article proposes a post-processing deblocking filter to reduce blocking effects. The proposed algorithm detects blocking effects by fusing the results of Sobel edge detector and wavelet-based edge detector. The filtering stage provides four filter modes to eliminate blocking effects at different color regions according to human color vision and color psychology analysis. Experimental results show that the proposed algorithm has better subjective and objective qualities for H.264/AVC reconstructed videos when compared to several existing methods.

  15. Evaluating the Performance of Wavelet-based Data-driven Models for Multistep-ahead Flood Forecasting in an Urbanized Watershed

    Science.gov (United States)

    Kasaee Roodsari, B.; Chandler, D. G.

    2015-12-01

    A real-time flood forecast system is presented to provide emergency management authorities sufficient lead time to execute plans for evacuation and asset protection in urban watersheds. This study investigates the performance of two hybrid models for real-time flood forecasting at different subcatchments of Ley Creek watershed, a heavily urbanized watershed in the vicinity of Syracuse, New York. Hybrid models include Wavelet-Based Artificial Neural Network (WANN) and Wavelet-Based Adaptive Neuro-Fuzzy Inference System (WANFIS). Both models are developed on the basis of real time stream network sensing. The wavelet approach is applied to decompose the collected water depth timeseries to Approximation and Detail components. The Approximation component is then used as an input to ANN and ANFIS models to forecast water level at lead times of 1 to 10 hours. The performance of WANN and WANFIS models are compared to ANN and ANFIS models for different lead times. Initial results demonstrated greater predictive power of hybrid models.

  16. Compression stockings

    Science.gov (United States)

    Call your health insurance or prescription plan: Find out if they pay for compression stockings. Ask if your durable medical equipment benefit pays for compression stockings. Get a prescription from your doctor. Find a medical equipment store where they can ...

  17. Real-Time Wavelet-Based Coordinated Control of Hybrid Energy Storage Systems for Denoising and Flattening Wind Power Output

    Directory of Open Access Journals (Sweden)

    Tran Thai Trung

    2014-10-01

    Full Text Available Since the penetration level of wind energy is continuously increasing, the negative impact caused by the fluctuation of wind power output needs to be carefully managed. This paper proposes a novel real-time coordinated control algorithm based on a wavelet transform to mitigate both short-term and long-term fluctuations by using a hybrid energy storage system (HESS. The short-term fluctuation is eliminated by using an electric double-layer capacitor (EDLC, while the wind-HESS system output is kept constant during each 10-min period by a Ni-MH battery (NB. State-of-charge (SOC control strategies for both EDLC and NB are proposed to maintain the SOC level of storage within safe operating limits. A ramp rate limitation (RRL requirement is also considered in the proposed algorithm. The effectiveness of the proposed algorithm has been tested by using real time simulation. The simulation model of the wind-HESS system is developed in the real-time digital simulator (RTDS/RSCAD environment. The proposed algorithm is also implemented as a user defined model of the RSCAD. The simulation results demonstrate that the HESS with the proposed control algorithm can indeed assist in dealing with the variation of wind power generation. Moreover, the proposed method shows better performance in smoothing out the fluctuation and managing the SOC of battery and EDLC than the simple moving average (SMA based method.

  18. Wavelet-based regularization and edge preservation for submillimetre 3D list-mode reconstruction data from a high resolution small animal PET system

    Energy Technology Data Exchange (ETDEWEB)

    Jesus Ochoa Dominguez, Humberto de, E-mail: hochoa@uacj.mx [Departamento de Ingenieria Eectrica y Computacion, Universidad Autonoma de Ciudad Juarez, Avenida del Charro 450 Norte, C.P. 32310 Ciudad Juarez, Chihuahua (Mexico); Ortega Maynez, Leticia; Osiris Vergara Villegas, Osslan; Gordillo Castillo, Nelly; Guadalupe Cruz Sanchez, Vianey; Gutierrez Casas, Efren David [Departamento de Ingenieria Eectrica y Computacion, Universidad Autonoma de Ciudad Juarez, Avenida del Charro 450 Norte, C.P. 32310 Ciudad Juarez, Chihuahua (Mexico)

    2011-10-01

    The data obtained from a PET system tend to be noisy because of the limitations of the current instrumentation and the detector efficiency. This problem is particularly severe in images of small animals as the noise contaminates areas of interest within small organs. Therefore, denoising becomes a challenging task. In this paper, a novel wavelet-based regularization and edge preservation method is proposed to reduce such noise. To demonstrate this method, image reconstruction using a small mouse {sup 18}F NEMA phantom and a {sup 18}F mouse was performed. Investigation on the effects of the image quality was addressed for each reconstruction case. Results show that the proposed method drastically reduces the noise and preserves the image details.

  19. Comparative data compression techniques and multi-compression results

    International Nuclear Information System (INIS)

    Hasan, M R; Ibrahimy, M I; Motakabber, S M A; Ferdaus, M M; Khan, M N H

    2013-01-01

    Data compression is very necessary in business data processing, because of the cost savings that it offers and the large volume of data manipulated in many business applications. It is a method or system for transmitting a digital image (i.e., an array of pixels) from a digital data source to a digital data receiver. More the size of the data be smaller, it provides better transmission speed and saves time. In this communication, we always want to transmit data efficiently and noise freely. This paper will provide some compression techniques for lossless text type data compression and comparative result of multiple and single compression, that will help to find out better compression output and to develop compression algorithms

  20. Spectral Compressive Sensing with Polar Interpolation

    DEFF Research Database (Denmark)

    Fyhn, Karsten; Dadkhahi, Hamid; F. Duarte, Marco

    2013-01-01

    . In this paper, we introduce a greedy recovery algorithm that leverages a band-exclusion function and a polar interpolation function to address these two issues in spectral compressive sensing. Our algorithm is geared towards line spectral estimation from compressive measurements and outperforms most existing...

  1. Compressive sensing in medical imaging.

    Science.gov (United States)

    Graff, Christian G; Sidky, Emil Y

    2015-03-10

    The promise of compressive sensing, exploitation of compressibility to achieve high quality image reconstructions with less data, has attracted a great deal of attention in the medical imaging community. At the Compressed Sensing Incubator meeting held in April 2014 at OSA Headquarters in Washington, DC, presentations were given summarizing some of the research efforts ongoing in compressive sensing for x-ray computed tomography and magnetic resonance imaging systems. This article provides an expanded version of these presentations. Sparsity-exploiting reconstruction algorithms that have gained popularity in the medical imaging community are studied, and examples of clinical applications that could benefit from compressive sensing ideas are provided. The current and potential future impact of compressive sensing on the medical imaging field is discussed.

  2. A biological compression model and its applications.

    Science.gov (United States)

    Cao, Minh Duc; Dix, Trevor I; Allison, Lloyd

    2011-01-01

    A biological compression model, expert model, is presented which is superior to existing compression algorithms in both compression performance and speed. The model is able to compress whole eukaryotic genomes. Most importantly, the model provides a framework for knowledge discovery from biological data. It can be used for repeat element discovery, sequence alignment and phylogenetic analysis. We demonstrate that the model can handle statistically biased sequences and distantly related sequences where conventional knowledge discovery tools often fail.

  3. Compressing Data Cube in Parallel OLAP Systems

    Directory of Open Access Journals (Sweden)

    Frank Dehne

    2007-03-01

    Full Text Available This paper proposes an efficient algorithm to compress the cubes in the progress of the parallel data cube generation. This low overhead compression mechanism provides block-by-block and record-by-record compression by using tuple difference coding techniques, thereby maximizing the compression ratio and minimizing the decompression penalty at run-time. The experimental results demonstrate that the typical compression ratio is about 30:1 without sacrificing running time. This paper also demonstrates that the compression method is suitable for Hilbert Space Filling Curve, a mechanism widely used in multi-dimensional indexing.

  4. Subjective evaluation of compressed image quality

    Science.gov (United States)

    Lee, Heesub; Rowberg, Alan H.; Frank, Mark S.; Choi, Hyung-Sik; Kim, Yongmin

    1992-05-01

    Lossy data compression generates distortion or error on the reconstructed image and the distortion becomes visible as the compression ratio increases. Even at the same compression ratio, the distortion appears differently depending on the compression method used. Because of the nonlinearity of the human visual system and lossy data compression methods, we have evaluated subjectively the quality of medical images compressed with two different methods, an intraframe and interframe coding algorithms. The evaluated raw data were analyzed statistically to measure interrater reliability and reliability of an individual reader. Also, the analysis of variance was used to identify which compression method is better statistically, and from what compression ratio the quality of a compressed image is evaluated as poorer than that of the original. Nine x-ray CT head images from three patients were used as test cases. Six radiologists participated in reading the 99 images (some were duplicates) compressed at four different compression ratios, original, 5:1, 10:1, and 15:1. The six readers agree more than by chance alone and their agreement was statistically significant, but there were large variations among readers as well as within a reader. The displacement estimated interframe coding algorithm is significantly better in quality than that of the 2-D block DCT at significance level 0.05. Also, 10:1 compressed images with the interframe coding algorithm do not show any significant differences from the original at level 0.05.

  5. A Motion Estimation Algorithm Using DTCWT and ARPS

    Directory of Open Access Journals (Sweden)

    Unan Y. Oktiawati

    2013-09-01

    Full Text Available In this paper, a hybrid motion estimation algorithm utilizing the Dual Tree Complex Wavelet Transform (DTCWT and the Adaptive Rood Pattern Search (ARPS block is presented. The proposed algorithm first transforms each video sequence with DTCWT. The frame n of the video sequence is used as a reference input and the frame n+2 is used to find the motion vector. Next, the ARPS block search algorithm is carried out and followed by an inverse DTCWT. The motion compensation is then carried out on each inversed frame n and motion vector. The results show that PSNR can be improved for mobile device without depriving its quality. The proposed algorithm also takes less memory usage compared to the DCT-based algorithm. The main contribution of this work is a hybrid wavelet-based motion estimation algorithm for mobile devices. Other contribution is the visual quality scoring system as used in section 6.

  6. Perform wordcount Map-Reduce Job in Single Node Apache Hadoop cluster and compress data using Lempel-Ziv-Oberhumer (LZO) algorithm

    OpenAIRE

    Mirajkar, Nandan; Bhujbal, Sandeep; Deshmukh, Aaradhana

    2013-01-01

    Applications like Yahoo, Facebook, Twitter have huge data which has to be stored and retrieved as per client access. This huge data storage requires huge database leading to increase in physical storage and becomes complex for analysis required in business growth. This storage capacity can be reduced and distributed processing of huge data can be done using Apache Hadoop which uses Map-reduce algorithm and combines the repeating data so that entire data is stored in reduced format. The paper ...

  7. Compressed sensing for distributed systems

    CERN Document Server

    Coluccia, Giulio; Magli, Enrico

    2015-01-01

    This book presents a survey of the state-of-the art in the exciting and timely topic of compressed sensing for distributed systems. It has to be noted that, while compressed sensing has been studied for some time now, its distributed applications are relatively new. Remarkably, such applications are ideally suited to exploit all the benefits that compressed sensing can provide. The objective of this book is to provide the reader with a comprehensive survey of this topic, from the basic concepts to different classes of centralized and distributed reconstruction algorithms, as well as a comparison of these techniques. This book collects different contributions on these aspects. It presents the underlying theory in a complete and unified way for the first time, presenting various signal models and their use cases. It contains a theoretical part collecting latest results in rate-distortion analysis of distributed compressed sensing, as well as practical implementations of algorithms obtaining performance close to...

  8. Fast Compressive Tracking.

    Science.gov (United States)

    Zhang, Kaihua; Zhang, Lei; Yang, Ming-Hsuan

    2014-10-01

    It is a challenging task to develop effective and efficient appearance models for robust object tracking due to factors such as pose variation, illumination change, occlusion, and motion blur. Existing online tracking algorithms often update models with samples from observations in recent frames. Despite much success has been demonstrated, numerous issues remain to be addressed. First, while these adaptive appearance models are data-dependent, there does not exist sufficient amount of data for online algorithms to learn at the outset. Second, online tracking algorithms often encounter the drift problems. As a result of self-taught learning, misaligned samples are likely to be added and degrade the appearance models. In this paper, we propose a simple yet effective and efficient tracking algorithm with an appearance model based on features extracted from a multiscale image feature space with data-independent basis. The proposed appearance model employs non-adaptive random projections that preserve the structure of the image feature space of objects. A very sparse measurement matrix is constructed to efficiently extract the features for the appearance model. We compress sample images of the foreground target and the background using the same sparse measurement matrix. The tracking task is formulated as a binary classification via a naive Bayes classifier with online update in the compressed domain. A coarse-to-fine search strategy is adopted to further reduce the computational complexity in the detection procedure. The proposed compressive tracking algorithm runs in real-time and performs favorably against state-of-the-art methods on challenging sequences in terms of efficiency, accuracy and robustness.

  9. Compressive Sensing in Communication Systems

    DEFF Research Database (Denmark)

    Fyhn, Karsten

    2013-01-01

    . The need for cheaper, smarter and more energy efficient wireless devices is greater now than ever. This thesis addresses this problem and concerns the application of the recently developed sampling theory of compressive sensing in communication systems. Compressive sensing is the merging of signal...... acquisition and compression. It allows for sampling a signal with a rate below the bound dictated by the celebrated Shannon-Nyquist sampling theorem. In some communication systems this necessary minimum sample rate, dictated by the Shannon-Nyquist sampling theorem, is so high it is at the limit of what...... with using compressive sensing in communication systems. The main contribution of this thesis is two-fold: 1) a new compressive sensing hardware structure for spread spectrum signals, which is simpler than the current state-of-the-art, and 2) a range of algorithms for parameter estimation for the class...

  10. Modelling and short-term forecasting of daily peak power demand in Victoria using two-dimensional wavelet based SDP models

    International Nuclear Information System (INIS)

    Truong, Nguyen-Vu; Wang, Liuping; Wong, Peter K.C.

    2008-01-01

    Power demand forecasting is of vital importance to the management and planning of power system operations which include generation, transmission, distribution, as well as system's security analysis and economic pricing processes. This paper concerns the modeling and short-term forecast of daily peak power demand in the state of Victoria, Australia. In this study, a two-dimensional wavelet based state dependent parameter (SDP) modelling approach is used to produce a compact mathematical model for this complex nonlinear dynamic system. In this approach, a nonlinear system is expressed by a set of linear regressive input and output terms (state variables) multiplied by the respective state dependent parameters that carry the nonlinearities in the form of 2-D wavelet series expansions. This model is identified based on historical data, descriptively representing the relationship and interaction between various components which affect the peak power demand of a certain day. The identified model has been used to forecast daily peak power demand in the state of Victoria, Australia in the time period from the 9th of August 2007 to the 24th of August 2007. With a MAPE (mean absolute prediction error) of 1.9%, it has clearly implied the effectiveness of the identified model. (author)

  11. Nondestructive Damage Assessment of Composite Structures Based on Wavelet Analysis of Modal Curvatures: State-of-the-Art Review and Description of Wavelet-Based Damage Assessment Benchmark

    Directory of Open Access Journals (Sweden)

    Andrzej Katunin

    2015-01-01

    Full Text Available The application of composite structures as elements of machines and vehicles working under various operational conditions causes degradation and occurrence of damage. Considering that composites are often used for responsible elements, for example, parts of aircrafts and other vehicles, it is extremely important to maintain them properly and detect, localize, and identify the damage occurring during their operation in possible early stage of its development. From a great variety of nondestructive testing methods developed to date, the vibration-based methods seem to be ones of the least expensive and simultaneously effective with appropriate processing of measurement data. Over the last decades a great popularity of vibration-based structural testing has been gained by wavelet analysis due to its high sensitivity to a damage. This paper presents an overview of results of numerous researchers working in the area of vibration-based damage assessment supported by the wavelet analysis and the detailed description of the Wavelet-based Structural Damage Assessment (WavStructDamAs Benchmark, which summarizes the author’s 5-year research in this area. The benchmark covers example problems of damage identification in various composite structures with various damage types using numerous wavelet transforms and supporting tools. The benchmark is openly available and allows performing the analysis on the example problems as well as on its own problems using available analysis tools.

  12. The evolution of spillover effects between oil and stock markets across multi-scales using a wavelet-based GARCH-BEKK model

    Science.gov (United States)

    Liu, Xueyong; An, Haizhong; Huang, Shupei; Wen, Shaobo

    2017-01-01

    Aiming to investigate the evolution of mean and volatility spillovers between oil and stock markets in the time and frequency dimensions, we employed WTI crude oil prices, the S&P 500 (USA) index and the MICEX index (Russia) for the period Jan. 2003-Dec. 2014 as sample data. We first applied a wavelet-based GARCH-BEKK method to examine the spillover features in frequency dimension. To consider the evolution of spillover effects in time dimension at multiple-scales, we then divided the full sample period into three sub-periods, pre-crisis period, crisis period, and post-crisis period. The results indicate that spillover effects vary across wavelet scales in terms of strength and direction. By analysis the time-varying linkage, we found the different evolution features of spillover effects between the Oil-US stock market and Oil-Russia stock market. The spillover relationship between oil and US stock market is shifting to short-term while the spillover relationship between oil and Russia stock market is changing to all time scales. That result implies that the linkage between oil and US stock market is weakening in the long-term, and the linkage between oil and Russia stock market is getting close in all time scales. This may explain the phenomenon that the US stock index and the Russia stock index showed the opposite trend with the falling of oil price in the post-crisis period.

  13. An efficient and extensible approach for compressing phylogenetic trees

    KAUST Repository

    Matthews, Suzanne J; Williams, Tiffani L

    2011-01-01

    Background: Biologists require new algorithms to efficiently compress and store their large collections of phylogenetic trees. Our previous work showed that TreeZip is a promising approach for compressing phylogenetic trees. In this paper, we extend

  14. Multi-resolution inversion algorithm for the attenuated radon transform

    KAUST Repository

    Barbano, Paolo Emilio

    2011-09-01

    We present a FAST implementation of the Inverse Attenuated Radon Transform which incorporates accurate collimator response, as well as artifact rejection due to statistical noise and data corruption. This new reconstruction procedure is performed by combining a memory-efficient implementation of the analytical inversion formula (AIF [1], [2]) with a wavelet-based version of a recently discovered regularization technique [3]. The paper introduces all the main aspects of the new AIF, as well numerical experiments on real and simulated data. Those display a substantial improvement in reconstruction quality when compared to linear or iterative algorithms. © 2011 IEEE.

  15. On-line compression of symmetrical multidimensional γ-ray spectra using adaptive orthogonal transforms

    International Nuclear Information System (INIS)

    Morhac, M.; Matousek, V.

    2008-01-01

    The efficient algorithm to compress multidimensional symmetrical γ-ray events is presented. The reduction of data volume can be achieved due to both the symmetry of the γ-ray spectra and compression capabilities of the employed adaptive orthogonal transform. Illustrative examples prove in the favor of the proposed compression algorithm. The algorithm was implemented for on-line compression of events. Acquired compressed data can be later processed in an interactive way

  16. FRESCO: Referential compression of highly similar sequences.

    Science.gov (United States)

    Wandelt, Sebastian; Leser, Ulf

    2013-01-01

    In many applications, sets of similar texts or sequences are of high importance. Prominent examples are revision histories of documents or genomic sequences. Modern high-throughput sequencing technologies are able to generate DNA sequences at an ever-increasing rate. In parallel to the decreasing experimental time and cost necessary to produce DNA sequences, computational requirements for analysis and storage of the sequences are steeply increasing. Compression is a key technology to deal with this challenge. Recently, referential compression schemes, storing only the differences between a to-be-compressed input and a known reference sequence, gained a lot of interest in this field. In this paper, we propose a general open-source framework to compress large amounts of biological sequence data called Framework for REferential Sequence COmpression (FRESCO). Our basic compression algorithm is shown to be one to two orders of magnitudes faster than comparable related work, while achieving similar compression ratios. We also propose several techniques to further increase compression ratios, while still retaining the advantage in speed: 1) selecting a good reference sequence; and 2) rewriting a reference sequence to allow for better compression. In addition,we propose a new way of further boosting the compression ratios by applying referential compression to already referentially compressed files (second-order compression). This technique allows for compression ratios way beyond state of the art, for instance,4,000:1 and higher for human genomes. We evaluate our algorithms on a large data set from three different species (more than 1,000 genomes, more than 3 TB) and on a collection of versions of Wikipedia pages. Our results show that real-time compression of highly similar sequences at high compression ratios is possible on modern hardware.

  17. Streaming Compression of Hexahedral Meshes

    Energy Technology Data Exchange (ETDEWEB)

    Isenburg, M; Courbet, C

    2010-02-03

    We describe a method for streaming compression of hexahedral meshes. Given an interleaved stream of vertices and hexahedral our coder incrementally compresses the mesh in the presented order. Our coder is extremely memory efficient when the input stream documents when vertices are referenced for the last time (i.e. when it contains topological finalization tags). Our coder then continuously releases and reuses data structures that no longer contribute to compressing the remainder of the stream. This means in practice that our coder has only a small fraction of the whole mesh in memory at any time. We can therefore compress very large meshes - even meshes that do not file in memory. Compared to traditional, non-streaming approaches that load the entire mesh and globally reorder it during compression, our algorithm trades a less compact compressed representation for significant gains in speed, memory, and I/O efficiency. For example, on the 456k hexahedra 'blade' mesh, our coder is twice as fast and uses 88 times less memory (only 3.1 MB) with the compressed file increasing about 3% in size. We also present the first scheme for predictive compression of properties associated with hexahedral cells.

  18. Music analysis and point-set compression

    DEFF Research Database (Denmark)

    Meredith, David

    2015-01-01

    COSIATEC, SIATECCompress and Forth’s algorithm are point-set compression algorithms developed for discovering repeated patterns in music, such as themes and motives that would be of interest to a music analyst. To investigate their effectiveness and versatility, these algorithms were evaluated...... on three analytical tasks that depend on the discovery of repeated patterns: classifying folk song melodies into tune families, discovering themes and sections in polyphonic music, and discovering subject and countersubject entries in fugues. Each algorithm computes a compressed encoding of a point......-set representation of a musical object in the form of a list of compact patterns, each pattern being given with a set of vectors indicating its occurrences. However, the algorithms adopt different strategies in their attempts to discover encodings that maximize compression.The best-performing algorithm on the folk...

  19. Wellhead compression

    Energy Technology Data Exchange (ETDEWEB)

    Harrington, Joe [Sertco Industries, Inc., Okemah, OK (United States); Vazquez, Daniel [Hoerbiger Service Latin America Inc., Deerfield Beach, FL (United States); Jacobs, Denis Richard [Hoerbiger do Brasil Industria de Equipamentos, Cajamar, SP (Brazil)

    2012-07-01

    Over time, all wells experience a natural decline in oil and gas production. In gas wells, the major problems are liquid loading and low downhole differential pressures which negatively impact total gas production. As a form of artificial lift, wellhead compressors help reduce the tubing pressure resulting in gas velocities above the critical velocity needed to surface water, oil and condensate regaining lost production and increasing recoverable reserves. Best results come from reservoirs with high porosity, high permeability, high initial flow rates, low decline rates and high total cumulative production. In oil wells, excessive annulus gas pressure tends to inhibit both oil and gas production. Wellhead compression packages can provide a cost effective solution to these problems by reducing the system pressure in the tubing or annulus, allowing for an immediate increase in production rates. Wells furthest from the gathering compressor typically benefit the most from wellhead compression due to system pressure drops. Downstream compressors also benefit from higher suction pressures reducing overall compression horsepower requirements. Special care must be taken in selecting the best equipment for these applications. The successful implementation of wellhead compression from an economical standpoint hinges on the testing, installation and operation of the equipment. Key challenges and suggested equipment features designed to combat those challenges and successful case histories throughout Latin America are discussed below.(author)

  20. Local Wavelet-Based Filtering of Electromyographic Signals to Eliminate the Electrocardiographic-Induced Artifacts in Patients with Spinal Cord Injury.

    Science.gov (United States)

    Nitzken, Matthew; Bajaj, Nihit; Aslan, Sevda; Gimel'farb, Georgy; El-Baz, Ayman; Ovechkin, Alexander

    2013-07-18

    Surface Electromyography (EMG) is a standard method used in clinical practice and research to assess motor function in order to help with the diagnosis of neuromuscular pathology in human and animal models. EMG recorded from trunk muscles involved in the activity of breathing can be used as a direct measure of respiratory motor function in patients with spinal cord injury (SCI) or other disorders associated with motor control deficits. However, EMG potentials recorded from these muscles are often contaminated with heart-induced electrocardiographic (ECG) signals. Elimination of these artifacts plays a critical role in the precise measure of the respiratory muscle electrical activity. This study was undertaken to find an optimal approach to eliminate the ECG artifacts from EMG recordings. Conventional global filtering can be used to decrease the ECG-induced artifact. However, this method can alter the EMG signal and changes physiologically relevant information. We hypothesize that, unlike global filtering, localized removal of ECG artifacts will not change the original EMG signals. We develop an approach to remove the ECG artifacts without altering the amplitude and frequency components of the EMG signal by using an externally recorded ECG signal as a mask to locate areas of the ECG spikes within EMG data. These segments containing ECG spikes were decomposed into 128 sub-wavelets by a custom-scaled Morlet Wavelet Transform. The ECG-related sub-wavelets at the ECG spike location were removed and a de-noised EMG signal was reconstructed. Validity of the proposed method was proven using mathematical simulated synthetic signals and EMG obtained from SCI patients. We compare the Root-mean Square Error and the Relative Change in Variance between this method, global, notch and adaptive filters. The results show that the localized wavelet-based filtering has the benefit of not introducing error in the native EMG signal and accurately removing ECG artifacts from EMG signals.

  1. Wavelet-based resolution recovery using an anatomical prior provides quantitative recovery for human population phantom PET [11C]raclopride data

    International Nuclear Information System (INIS)

    Shidahara, M; Tamura, H; Tsoumpas, C; McGinnity, C J; Hammers, A; Turkheimer, F E; Kato, T; Watabe, H

    2012-01-01

    The objective of this study was to evaluate a resolution recovery (RR) method using a variety of simulated human brain [ 11 C]raclopride positron emission tomography (PET) images. Simulated datasets of 15 numerical human phantoms were processed by a wavelet-based RR method using an anatomical prior. The anatomical prior was in the form of a hybrid segmented atlas, which combined an atlas for anatomical labelling and a PET image for functional labelling of each anatomical structure. We applied RR to both 60 min static and dynamic PET images. Recovery was quantified in 84 regions, comparing the typical ‘true’ value for the simulation, as obtained in normal subjects, simulated and RR PET images. The radioactivity concentration in the white matter, striatum and other cortical regions was successfully recovered for the 60 min static image of all 15 human phantoms; the dependence of the solution on accurate anatomical information was demonstrated by the difficulty of the technique to retrieve the subthalamic nuclei due to mismatch between the two atlases used for data simulation and recovery. Structural and functional synergy for resolution recovery (SFS-RR) improved quantification in the caudate and putamen, the main regions of interest, from −30.1% and −26.2% to −17.6% and −15.1%, respectively, for the 60 min static image and from −51.4% and −38.3% to −27.6% and −20.3% for the binding potential (BP ND ) image, respectively. The proposed methodology proved effective in the RR of small structures from brain [ 11 C]raclopride PET images. The improvement is consistent across the anatomical variability of a simulated population as long as accurate anatomical segmentations are provided. (paper)

  2. Subband Coding Methods for Seismic Data Compression

    Science.gov (United States)

    Kiely, A.; Pollara, F.

    1995-01-01

    This paper presents a study of seismic data compression techniques and a compression algorithm based on subband coding. The compression technique described could be used as a progressive transmission system, where successive refinements of the data can be requested by the user. This allows seismologists to first examine a coarse version of waveforms with minimal usage of the channel and then decide where refinements are required. Rate-distortion performance results are presented and comparisons are made with two block transform methods.

  3. Compression and fast retrieval of SNP data.

    Science.gov (United States)

    Sambo, Francesco; Di Camillo, Barbara; Toffolo, Gianna; Cobelli, Claudio

    2014-11-01

    The increasing interest in rare genetic variants and epistatic genetic effects on complex phenotypic traits is currently pushing genome-wide association study design towards datasets of increasing size, both in the number of studied subjects and in the number of genotyped single nucleotide polymorphisms (SNPs). This, in turn, is leading to a compelling need for new methods for compression and fast retrieval of SNP data. We present a novel algorithm and file format for compressing and retrieving SNP data, specifically designed for large-scale association studies. Our algorithm is based on two main ideas: (i) compress linkage disequilibrium blocks in terms of differences with a reference SNP and (ii) compress reference SNPs exploiting information on their call rate and minor allele frequency. Tested on two SNP datasets and compared with several state-of-the-art software tools, our compression algorithm is shown to be competitive in terms of compression rate and to outperform all tools in terms of time to load compressed data. Our compression and decompression algorithms are implemented in a C++ library, are released under the GNU General Public License and are freely downloadable from http://www.dei.unipd.it/~sambofra/snpack.html. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  4. Analysis by compression

    DEFF Research Database (Denmark)

    Meredith, David

    MEL is a geometric music encoding language designed to allow for musical objects to be encoded parsimoniously as sets of points in pitch-time space, generated by performing geometric transformations on component patterns. MEL has been implemented in Java and coupled with the SIATEC pattern...... discovery algorithm to allow for compact encodings to be generated automatically from in extenso note lists. The MEL-SIATEC system is founded on the belief that music analysis and music perception can be modelled as the compression of in extenso descriptions of musical objects....

  5. Compressive full waveform lidar

    Science.gov (United States)

    Yang, Weiyi; Ke, Jun

    2017-05-01

    To avoid high bandwidth detector, fast speed A/D converter, and large size memory disk, a compressive full waveform LIDAR system, which uses a temporally modulated laser instead of a pulsed laser, is studied in this paper. Full waveform data from NEON (National Ecological Observatory Network) are used. Random binary patterns are used to modulate the source. To achieve 0.15 m ranging resolution, a 100 MSPS A/D converter is assumed to make measurements. SPIRAL algorithm with canonical basis is employed when Poisson noise is considered in the low illuminated condition.

  6. Speech Compression

    Directory of Open Access Journals (Sweden)

    Jerry D. Gibson

    2016-06-01

    Full Text Available Speech compression is a key technology underlying digital cellular communications, VoIP, voicemail, and voice response systems. We trace the evolution of speech coding based on the linear prediction model, highlight the key milestones in speech coding, and outline the structures of the most important speech coding standards. Current challenges, future research directions, fundamental limits on performance, and the critical open problem of speech coding for emergency first responders are all discussed.

  7. A New DOA Algorithm Based on Nonlinear Compress Core Function in Symmetric α-stable Distribution Noise Environment%一种对称琢稳定分布噪声环境下DOA估计新算法

    Institute of Scientific and Technical Information of China (English)

    马金全; 葛临东; 童莉

    2014-01-01

    脉冲噪声环境下波达方向( DOA)估计是阵列信号处理领域一个新兴研究方向。针对α稳定分布噪声环境下经典MUSIC算法性能退化的问题,提出了一种新的基于非线性压缩核函数( NCCF)的DOA估计算法。该算法利用基于NCCF的有界矩阵代替了MUSIC的协方差矩阵,通过对有界矩阵进行特征分解确定信号子空间和噪声子空间,借用MUSIC谱估计公式进行谱峰搜索,得到DOA的估计值。仿真结果表明,NCCF-MUSIC算法运算复杂度较低,相比于基于分数低阶统计量( FLOS)的MUSIC方法和基于广义类相关熵( GCAS)的MUSIC算法,该方法具有更好的准确度和稳定性。%Direction of arrival ( DOA) estimation in the impulse noise environment is a new research direc-tion in the array signal processing field. To solve the problem of performance degradation when applying classic MUSIC algorithm for DOA estimation in the α-stable distribution noise environment,a novel DOA estimation algorithm based on a nonlinear compress core function ( NCCF ) is provided and named as the NCCF-MUSIC. To obtain a DOA estimation,the NCCF-MUSIC method replaces the covariance matrix in MUSIC by a bounded matrix based on the NCCF,and then determines the signal subspace and the noise subspace by feature decomposition, and finally, introduces the MUSIC spectrum estimation algorithm to make a spectral peak searching. Simulation results show that the new NCCF-MUSIC method with a lower computation cost has the higher performance in accuracy and validity than the MUSIC methods based on fractional lower order statistics ( FLOS) or based on generalized correntropy-analogous statistics ( GCAS) .

  8. Complex Wavelet Based Modulation Analysis

    DEFF Research Database (Denmark)

    Luneau, Jean-Marc; Lebrun, Jérôme; Jensen, Søren Holdt

    2008-01-01

    Low-frequency modulation of sound carry important information for speech and music. The modulation spectrum i commonly obtained by spectral analysis of the sole temporal envelopes of the sub-bands out of a time-frequency analysis. Processing in this domain usually creates undesirable distortions...... polynomial trends. Moreover an analytic Hilbert-like transform is possible with complex wavelets implemented as an orthogonal filter bank. By working in an alternative transform domain coined as “Modulation Subbands”, this transform shows very promising denoising capabilities and suggests new approaches for joint...

  9. A wavelet transform algorithm for peak detection and application to powder x-ray diffraction data.

    Science.gov (United States)

    Gregoire, John M; Dale, Darren; van Dover, R Bruce

    2011-01-01

    Peak detection is ubiquitous in the analysis of spectral data. While many noise-filtering algorithms and peak identification algorithms have been developed, recent work [P. Du, W. Kibbe, and S. Lin, Bioinformatics 22, 2059 (2006); A. Wee, D. Grayden, Y. Zhu, K. Petkovic-Duran, and D. Smith, Electrophoresis 29, 4215 (2008)] has demonstrated that both of these tasks are efficiently performed through analysis of the wavelet transform of the data. In this paper, we present a wavelet-based peak detection algorithm with user-defined parameters that can be readily applied to the application of any spectral data. Particular attention is given to the algorithm's resolution of overlapping peaks. The algorithm is implemented for the analysis of powder diffraction data, and successful detection of Bragg peaks is demonstrated for both low signal-to-noise data from theta-theta diffraction of nanoparticles and combinatorial x-ray diffraction data from a composition spread thin film. These datasets have different types of background signals which are effectively removed in the wavelet-based method, and the results demonstrate that the algorithm provides a robust method for automated peak detection.

  10. Image quality (IQ) guided multispectral image compression

    Science.gov (United States)

    Zheng, Yufeng; Chen, Genshe; Wang, Zhonghai; Blasch, Erik

    2016-05-01

    Image compression is necessary for data transportation, which saves both transferring time and storage space. In this paper, we focus on our discussion on lossy compression. There are many standard image formats and corresponding compression algorithms, for examples, JPEG (DCT -- discrete cosine transform), JPEG 2000 (DWT -- discrete wavelet transform), BPG (better portable graphics) and TIFF (LZW -- Lempel-Ziv-Welch). The image quality (IQ) of decompressed image will be measured by numerical metrics such as root mean square error (RMSE), peak signal-to-noise ratio (PSNR), and structural Similarity (SSIM) Index. Given an image and a specified IQ, we will investigate how to select a compression method and its parameters to achieve an expected compression. Our scenario consists of 3 steps. The first step is to compress a set of interested images by varying parameters and compute their IQs for each compression method. The second step is to create several regression models per compression method after analyzing the IQ-measurement versus compression-parameter from a number of compressed images. The third step is to compress the given image with the specified IQ using the selected compression method (JPEG, JPEG2000, BPG, or TIFF) according to the regressed models. The IQ may be specified by a compression ratio (e.g., 100), then we will select the compression method of the highest IQ (SSIM, or PSNR). Or the IQ may be specified by a IQ metric (e.g., SSIM = 0.8, or PSNR = 50), then we will select the compression method of the highest compression ratio. Our experiments tested on thermal (long-wave infrared) images (in gray scales) showed very promising results.

  11. Compressive Transient Imaging

    KAUST Repository

    Sun, Qilin

    2017-04-01

    High resolution transient/3D imaging technology is of high interest in both scientific research and commercial application. Nowadays, all of the transient imaging methods suffer from low resolution or time consuming mechanical scanning. We proposed a new method based on TCSPC and Compressive Sensing to achieve a high resolution transient imaging with a several seconds capturing process. Picosecond laser sends a serious of equal interval pulse while synchronized SPAD camera\\'s detecting gate window has a precise phase delay at each cycle. After capturing enough points, we are able to make up a whole signal. By inserting a DMD device into the system, we are able to modulate all the frames of data using binary random patterns to reconstruct a super resolution transient/3D image later. Because the low fill factor of SPAD sensor will make a compressive sensing scenario ill-conditioned, We designed and fabricated a diffractive microlens array. We proposed a new CS reconstruction algorithm which is able to denoise at the same time for the measurements suffering from Poisson noise. Instead of a single SPAD senor, we chose a SPAD array because it can drastically reduce the requirement for the number of measurements and its reconstruction time. Further more, it not easy to reconstruct a high resolution image with only one single sensor while for an array, it just needs to reconstruct small patches and a few measurements. In this thesis, we evaluated the reconstruction methods using both clean measurements and the version corrupted by Poisson noise. The results show how the integration over the layers influence the image quality and our algorithm works well while the measurements suffer from non-trival Poisson noise. It\\'s a breakthrough in the areas of both transient imaging and compressive sensing.

  12. Exploring compression techniques for ROOT IO

    Science.gov (United States)

    Zhang, Z.; Bockelman, B.

    2017-10-01

    ROOT provides an flexible format used throughout the HEP community. The number of use cases - from an archival data format to end-stage analysis - has required a number of tradeoffs to be exposed to the user. For example, a high “compression level” in the traditional DEFLATE algorithm will result in a smaller file (saving disk space) at the cost of slower decompression (costing CPU time when read). At the scale of the LHC experiment, poor design choices can result in terabytes of wasted space or wasted CPU time. We explore and attempt to quantify some of these tradeoffs. Specifically, we explore: the use of alternate compressing algorithms to optimize for read performance; an alternate method of compressing individual events to allow efficient random access; and a new approach to whole-file compression. Quantitative results are given, as well as guidance on how to make compression decisions for different use cases.

  13. Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis.

    Science.gov (United States)

    Yang, Chao; He, Zengyou; Yu, Weichuan

    2009-01-06

    In mass spectrometry (MS) based proteomic data analysis, peak detection is an essential step for subsequent analysis. Recently, there has been significant progress in the development of various peak detection algorithms. However, neither a comprehensive survey nor an experimental comparison of these algorithms is yet available. The main objective of this paper is to provide such a survey and to compare the performance of single spectrum based peak detection methods. In general, we can decompose a peak detection procedure into three consequent parts: smoothing, baseline correction and peak finding. We first categorize existing peak detection algorithms according to the techniques used in different phases. Such a categorization reveals the differences and similarities among existing peak detection algorithms. Then, we choose five typical peak detection algorithms to conduct a comprehensive experimental study using both simulation data and real MALDI MS data. The results of comparison show that the continuous wavelet-based algorithm provides the best average performance.

  14. New Theory and Algorithms for Compressive Sensing

    National Research Council Canada - National Science Library

    Baraniuk, Richard G

    2009-01-01

    .... We first demonstrated the information scalability of CS. We applied CS principles to analog-to-digital conversion, showing ADC can be accomplished on structured high rate signals with sub-Nyquist sampling...

  15. Universal data compression and repetition times

    NARCIS (Netherlands)

    Willems, Frans M J

    1989-01-01

    A new universal data compression algorithm is described. This algorithm encodes L source symbols at a time. For the class of binary stationary sources, its rate does not exceed [formula omitted] [formula omitted] bits per source symbol. In our analysis, a property of repetition times turns out to be

  16. Visualization of big SPH simulations via compressed octree grids

    KAUST Repository

    Reichl, Florian

    2013-10-01

    Interactive and high-quality visualization of spatially continuous 3D fields represented by scattered distributions of billions of particles is challenging. One common approach is to resample the quantities carried by the particles to a regular grid and to render the grid via volume ray-casting. In large-scale applications such as astrophysics, however, the required grid resolution can easily exceed 10K samples per spatial dimension, letting resampling approaches appear unfeasible. In this paper we demonstrate that even in these extreme cases such approaches perform surprisingly well, both in terms of memory requirement and rendering performance. We resample the particle data to a multiresolution multiblock grid, where the resolution of the blocks is dictated by the particle distribution. From this structure we build an octree grid, and we then compress each block in the hierarchy at no visual loss using wavelet-based compression. Since decompression can be performed on the GPU, it can be integrated effectively into GPU-based out-of-core volume ray-casting. We compare our approach to the perspective grid approach which resamples at run-time into a view-aligned grid. We demonstrate considerably faster rendering times at high quality, at only a moderate memory increase compared to the raw particle set. © 2013 IEEE.

  17. Techniques for data compression in experimental nuclear physics problems

    International Nuclear Information System (INIS)

    Byalko, A.A.; Volkov, N.G.; Tsupko-Sitnikov, V.M.

    1984-01-01

    Techniques and ways for data compression during physical experiments are estimated. Data compression algorithms are divided into three groups: the first one includes the algorithms based on coding and which posses only average indexes by data files, the second group includes algorithms with data processing elements, the third one - algorithms for converted data storage. The greatest promise for the techniques connected with data conversion is concluded. The techniques possess high indexes for compression efficiency and for fast response, permit to store information close to the source one

  18. Fourier and Wavelet Based Characterisation of the Ionospheric Response to the Solar Eclipse of August, the 11th, 1999, Measured Through 1-minute Vertical Ionospheric Sounding

    Science.gov (United States)

    Sauli, P.; Abry, P.; Boska, J.

    2004-05-01

    The aim of the present work is to study the ionospheric response induced by the solar eclipse of August, the 11th, 1999. We provide Fourier and wavelet based characterisations of the propagation of the acoustic-gravity waves induced by the solar eclipse. The analysed data consist of profiles of electron concentration. They are derived from 1-minute vertical incidence ionospheric sounding measurements, performed at the Pruhonice observatory (Czech republic, 49.9N, 14.5E). The chosen 1-minute high sampling rate aims at enabling us to specifically see modes below acoustic cut-off period. The August period was characterized by Solar Flux F10.7 = 128, steady solar wind, quiet magnetospheric conditions, a low geomagnetic activity (Dst index varies from -10 nT to -20 nT, Σ Kp index reached value of 12+). The eclipse was notably exceptional in uniform solar disk. These conditions and fact that the culmination of the solar eclipse over central Europe occurred at local noon are such that the observed ionospheric response is mainly that of the solar eclipse. We provide a full characterization of the propagation of the waves in terms of times of occurrence, group and phase velocities, propagation direction, characteristic period and lifetime of the particular wave structure. However, ionospheric vertical sounding technique enables us to deal with vertical components of each characteristic. Parameters are estimated combining Fourier and wavelet analysis. Our conclusions confirm earlier theoretical and experimental findings, reported in [Altadill et al., 2001; Farges et al., 2001; Muller-Wodarg et al.,1998] regarding the generation and propagation of gravity waves and provide complementary characterisation using wavelet approaches. We also report a new evidence for the generation and propagation of acoustic waves induced by the solar eclipse through the ionospheric F region. Up to our knowledge, this is the first time that acoustic waves can be demonstrated based on ionospheric

  19. Compressing spatio-temporal trajectories

    DEFF Research Database (Denmark)

    Gudmundsson, Joachim; Katajainen, Jyrki; Merrick, Damian

    2009-01-01

    such that the most common spatio-temporal queries can still be answered approximately after the compression has taken place. In the process, we develop an implementation of the Douglas–Peucker path-simplification algorithm which works efficiently even in the case where the polygonal path given as input is allowed...... to self-intersect. For a polygonal path of size n, the processing time is O(nlogkn) for k=2 or k=3 depending on the type of simplification....

  20. The Basic Principles and Methods of the System Approach to Compression of Telemetry Data

    Science.gov (United States)

    Levenets, A. V.

    2018-01-01

    The task of data compressing of measurement data is still urgent for information-measurement systems. In paper the basic principles necessary for designing of highly effective systems of compression of telemetric information are offered. A basis of the offered principles is representation of a telemetric frame as whole information space where we can find of existing correlation. The methods of data transformation and compressing algorithms realizing the offered principles are described. The compression ratio for offered compression algorithm is about 1.8 times higher, than for a classic algorithm. Thus, results of a research of methods and algorithms showing their good perspectives.

  1. Fingerprints in Compressed Strings

    DEFF Research Database (Denmark)

    Bille, Philip; Cording, Patrick Hagge; Gørtz, Inge Li

    2013-01-01

    The Karp-Rabin fingerprint of a string is a type of hash value that due to its strong properties has been used in many string algorithms. In this paper we show how to construct a data structure for a string S of size N compressed by a context-free grammar of size n that answers fingerprint queries...... derivative that captures LZ78 compression and its variations) we get O(loglogN) query time. Hence, our data structures has the same time and space complexity as for random access in SLPs. We utilize the fingerprint data structures to solve the longest common extension problem in query time O(logNlogℓ) and O....... That is, given indices i and j, the answer to a query is the fingerprint of the substring S[i,j]. We present the first O(n) space data structures that answer fingerprint queries without decompressing any characters. For Straight Line Programs (SLP) we get O(logN) query time, and for Linear SLPs (an SLP...

  2. Concurrent data compression and protection

    International Nuclear Information System (INIS)

    Saeed, M.

    2009-01-01

    Data compression techniques involve transforming data of a given format, called source message, to data of a smaller sized format, called codeword. The primary objective of data encryption is to ensure security of data if it is intercepted by an eavesdropper. It transforms data of a given format, called plaintext, to another format, called ciphertext, using an encryption key or keys. Thus, combining the processes of compression and encryption together must be done in this order, that is, compression followed by encryption because all compression techniques heavily rely on the redundancies which are inherently a part of a regular text or speech. The aim of this research is to combine two processes of compression (using an existing scheme) with a new encryption scheme which should be compatible with encoding scheme embedded in encoder. The novel technique proposed by the authors is new, unique and is highly secured. The deployment of sentinel marker' enhances the security of the proposed TR-One algorithm from 2/sup 44/ ciphertexts to 2/sup 44/ +2/sub 20/ ciphertexts thus imposing extra challenges to the intruders. (author)

  3. An efficient adaptive arithmetic coding image compression technology

    International Nuclear Information System (INIS)

    Wang Xing-Yuan; Yun Jiao-Jiao; Zhang Yong-Lei

    2011-01-01

    This paper proposes an efficient lossless image compression scheme for still images based on an adaptive arithmetic coding compression algorithm. The algorithm increases the image coding compression rate and ensures the quality of the decoded image combined with the adaptive probability model and predictive coding. The use of adaptive models for each encoded image block dynamically estimates the probability of the relevant image block. The decoded image block can accurately recover the encoded image according to the code book information. We adopt an adaptive arithmetic coding algorithm for image compression that greatly improves the image compression rate. The results show that it is an effective compression technology. (electromagnetism, optics, acoustics, heat transfer, classical mechanics, and fluid dynamics)

  4. Extended seizure detection algorithm for intracranial EEG recordings

    DEFF Research Database (Denmark)

    Kjaer, T. W.; Remvig, L. S.; Henriksen, J.

    2010-01-01

    Objective: We implemented and tested an existing seizure detection algorithm for scalp EEG (sEEG) with the purpose of improving it to intracranial EEG (iEEG) recordings. Method: iEEG was obtained from 16 patients with focal epilepsy undergoing work up for resective epilepsy surgery. Each patient...... had 4 or 5 recorded seizures and 24 hours of non-ictal data were used for evaluation. Data from three electrodes placed at the ictal focus were used for the analysis. A wavelet based feature extraction algorithm delivered input to a support vector machine (SVM) classifier for distinction between ictal...... and non-ictal iEEG. We compare our results to a method published by Shoeb in 2004. While the original method on sEEG was optimal with the use of only four subbands in the wavelet analysis, we found that better seizure detection could be made if all subbands were used for iEEG. Results: When using...

  5. Bitshuffle: Filter for improving compression of typed binary data

    Science.gov (United States)

    Masui, Kiyoshi

    2017-12-01

    Bitshuffle rearranges typed, binary data for improving compression; the algorithm is implemented in a python/C package within the Numpy framework. The library can be used alongside HDF5 to compress and decompress datasets and is integrated through the dynamically loaded filters framework. Algorithmically, Bitshuffle is closely related to HDF5's Shuffle filter except it operates at the bit level instead of the byte level. Arranging a typed data array in to a matrix with the elements as the rows and the bits within the elements as the columns, Bitshuffle "transposes" the matrix, such that all the least-significant-bits are in a row, etc. This transposition is performed within blocks of data roughly 8kB long; this does not in itself compress data, but rearranges it for more efficient compression. A compression library is necessary to perform the actual compression. This scheme has been used for compression of radio data in high performance computing.

  6. Comparing biological networks via graph compression

    Directory of Open Access Journals (Sweden)

    Hayashida Morihiro

    2010-09-01

    Full Text Available Abstract Background Comparison of various kinds of biological data is one of the main problems in bioinformatics and systems biology. Data compression methods have been applied to comparison of large sequence data and protein structure data. Since it is still difficult to compare global structures of large biological networks, it is reasonable to try to apply data compression methods to comparison of biological networks. In existing compression methods, the uniqueness of compression results is not guaranteed because there is some ambiguity in selection of overlapping edges. Results This paper proposes novel efficient methods, CompressEdge and CompressVertices, for comparing large biological networks. In the proposed methods, an original network structure is compressed by iteratively contracting identical edges and sets of connected edges. Then, the similarity of two networks is measured by a compression ratio of the concatenated networks. The proposed methods are applied to comparison of metabolic networks of several organisms, H. sapiens, M. musculus, A. thaliana, D. melanogaster, C. elegans, E. coli, S. cerevisiae, and B. subtilis, and are compared with an existing method. These results suggest that our methods can efficiently measure the similarities between metabolic networks. Conclusions Our proposed algorithms, which compress node-labeled networks, are useful for measuring the similarity of large biological networks.

  7. The possibilities of compressed sensing based migration

    KAUST Repository

    Aldawood, Ali; Hoteit, Ibrahim; Alkhalifah, Tariq Ali

    2013-01-01

    Linearized waveform inversion or Least-square migration helps reduce migration artifacts caused by limited acquisition aperture, coarse sampling of sources and receivers, and low subsurface illumination. However, leastsquare migration, based on L2-norm minimization of the misfit function, tends to produce a smeared (smoothed) depiction of the true subsurface reflectivity. Assuming that the subsurface reflectivity distribution is a sparse signal, we use a compressed-sensing (Basis Pursuit) algorithm to retrieve this sparse distribution from a small number of linear measurements. We applied a compressed-sensing algorithm to image a synthetic fault model using dense and sparse acquisition geometries. Tests on synthetic data demonstrate the ability of compressed-sensing to produce highly resolved migrated images. We, also, studied the robustness of the Basis Pursuit algorithm in the presence of Gaussian random noise.

  8. The possibilities of compressed sensing based migration

    KAUST Repository

    Aldawood, Ali

    2013-09-22

    Linearized waveform inversion or Least-square migration helps reduce migration artifacts caused by limited acquisition aperture, coarse sampling of sources and receivers, and low subsurface illumination. However, leastsquare migration, based on L2-norm minimization of the misfit function, tends to produce a smeared (smoothed) depiction of the true subsurface reflectivity. Assuming that the subsurface reflectivity distribution is a sparse signal, we use a compressed-sensing (Basis Pursuit) algorithm to retrieve this sparse distribution from a small number of linear measurements. We applied a compressed-sensing algorithm to image a synthetic fault model using dense and sparse acquisition geometries. Tests on synthetic data demonstrate the ability of compressed-sensing to produce highly resolved migrated images. We, also, studied the robustness of the Basis Pursuit algorithm in the presence of Gaussian random noise.

  9. Fundamental study of compression for movie files of coronary angiography

    Science.gov (United States)

    Ando, Takekazu; Tsuchiya, Yuichiro; Kodera, Yoshie

    2005-04-01

    When network distribution of movie files was considered as reference, it could be useful that the lossy compression movie files which has small file size. We chouse three kinds of coronary stricture movies with different moving speed as an examination object; heart rate of slow, normal and fast movies. The movies of MPEG-1, DivX5.11, WMV9 (Windows Media Video 9), and WMV9-VCM (Windows Media Video 9-Video Compression Manager) were made from three kinds of AVI format movies with different moving speeds. Five kinds of movies that are four kinds of compression movies and non-compression AVI instead of the DICOM format were evaluated by Thurstone's method. The Evaluation factors of movies were determined as "sharpness, granularity, contrast, and comprehensive evaluation." In the virtual bradycardia movie, AVI was the best evaluation at all evaluation factors except the granularity. In the virtual normal movie, an excellent compression technique is different in all evaluation factors. In the virtual tachycardia movie, MPEG-1 was the best evaluation at all evaluation factors expects the contrast. There is a good compression form depending on the speed of movies because of the difference of compression algorithm. It is thought that it is an influence by the difference of the compression between frames. The compression algorithm for movie has the compression between the frames and the intra-frame compression. As the compression algorithm give the different influence to image by each compression method, it is necessary to examine the relation of the compression algorithm and our results.

  10. Combined Sparsifying Transforms for Compressive Image Fusion

    Directory of Open Access Journals (Sweden)

    ZHAO, L.

    2013-11-01

    Full Text Available In this paper, we present a new compressive image fusion method based on combined sparsifying transforms. First, the framework of compressive image fusion is introduced briefly. Then, combined sparsifying transforms are presented to enhance the sparsity of images. Finally, a reconstruction algorithm based on the nonlinear conjugate gradient is presented to get the fused image. The simulations demonstrate that by using the combined sparsifying transforms better results can be achieved in terms of both the subjective visual effect and the objective evaluation indexes than using only a single sparsifying transform for compressive image fusion.

  11. EP-based wavelet coefficient quantization for linear distortion ECG data compression.

    Science.gov (United States)

    Hung, King-Chu; Wu, Tsung-Ching; Lee, Hsieh-Wei; Liu, Tung-Kuan

    2014-07-01

    Reconstruction quality maintenance is of the essence for ECG data compression due to the desire for diagnosis use. Quantization schemes with non-linear distortion characteristics usually result in time-consuming quality control that blocks real-time application. In this paper, a new wavelet coefficient quantization scheme based on an evolution program (EP) is proposed for wavelet-based ECG data compression. The EP search can create a stationary relationship among the quantization scales of multi-resolution levels. The stationary property implies that multi-level quantization scales can be controlled with a single variable. This hypothesis can lead to a simple design of linear distortion control with 3-D curve fitting technology. In addition, a competitive strategy is applied for alleviating data dependency effect. By using the ECG signals saved in MIT and PTB databases, many experiments were undertaken for the evaluation of compression performance, quality control efficiency, data dependency influence. The experimental results show that the new EP-based quantization scheme can obtain high compression performance and keep linear distortion behavior efficiency. This characteristic guarantees fast quality control even for the prediction model mismatching practical distortion curve. Copyright © 2014 IPEM. Published by Elsevier Ltd. All rights reserved.

  12. Cosmological Particle Data Compression in Practice

    Science.gov (United States)

    Zeyen, M.; Ahrens, J.; Hagen, H.; Heitmann, K.; Habib, S.

    2017-12-01

    In cosmological simulations trillions of particles are handled and several terabytes of unstructured particle data are generated in each time step. Transferring this data directly from memory to disk in an uncompressed way results in a massive load on I/O and storage systems. Hence, one goal of domain scientists is to compress the data before storing it to disk while minimizing the loss of information. To prevent reading back uncompressed data from disk, this can be done in an in-situ process. Since the simulation continuously generates data, the available time for the compression of one time step is limited. Therefore, the evaluation of compression techniques has shifted from only focusing on compression rates to include run-times and scalability.In recent years several compression techniques for cosmological data have become available. These techniques can be either lossy or lossless, depending on the technique. For both cases, this study aims to evaluate and compare the state of the art compression techniques for unstructured particle data. This study focuses on the techniques available in the Blosc framework with its multi-threading support, the XZ Utils toolkit with the LZMA algorithm that achieves high compression rates, and the widespread FPZIP and ZFP methods for lossy compressions.For the investigated compression techniques, quantitative performance indicators such as compression rates, run-time/throughput, and reconstruction errors are measured. Based on these factors, this study offers a comprehensive analysis of the individual techniques and discusses their applicability for in-situ compression. In addition, domain specific measures are evaluated on the reconstructed data sets, and the relative error rates and statistical properties are analyzed and compared. Based on this study future challenges and directions in the compression of unstructured cosmological particle data were identified.

  13. Cloud Optimized Image Format and Compression

    Science.gov (United States)

    Becker, P.; Plesea, L.; Maurer, T.

    2015-04-01

    Cloud based image storage and processing requires revaluation of formats and processing methods. For the true value of the massive volumes of earth observation data to be realized, the image data needs to be accessible from the cloud. Traditional file formats such as TIF and NITF were developed in the hay day of the desktop and assumed fast low latency file access. Other formats such as JPEG2000 provide for streaming protocols for pixel data, but still require a server to have file access. These concepts no longer truly hold in cloud based elastic storage and computation environments. This paper will provide details of a newly evolving image storage format (MRF) and compression that is optimized for cloud environments. Although the cost of storage continues to fall for large data volumes, there is still significant value in compression. For imagery data to be used in analysis and exploit the extended dynamic range of the new sensors, lossless or controlled lossy compression is of high value. Compression decreases the data volumes stored and reduces the data transferred, but the reduced data size must be balanced with the CPU required to decompress. The paper also outlines a new compression algorithm (LERC) for imagery and elevation data that optimizes this balance. Advantages of the compression include its simple to implement algorithm that enables it to be efficiently accessed using JavaScript. Combing this new cloud based image storage format and compression will help resolve some of the challenges of big image data on the internet.

  14. A hybrid data compression approach for online backup service

    Science.gov (United States)

    Wang, Hua; Zhou, Ke; Qin, MingKang

    2009-08-01

    With the popularity of Saas (Software as a service), backup service has becoming a hot topic of storage application. Due to the numerous backup users, how to reduce the massive data load is a key problem for system designer. Data compression provides a good solution. Traditional data compression application used to adopt a single method, which has limitations in some respects. For example data stream compression can only realize intra-file compression, de-duplication is used to eliminate inter-file redundant data, compression efficiency cannot meet the need of backup service software. This paper proposes a novel hybrid compression approach, which includes two levels: global compression and block compression. The former can eliminate redundant inter-file copies across different users, the latter adopts data stream compression technology to realize intra-file de-duplication. Several compressing algorithms were adopted to measure the compression ratio and CPU time. Adaptability using different algorithm in certain situation is also analyzed. The performance analysis shows that great improvement is made through the hybrid compression policy.

  15. Automated quantitative analysis of in-situ NaI measured spectra in the marine environment using a wavelet-based smoothing technique

    International Nuclear Information System (INIS)

    Tsabaris, Christos; Prospathopoulos, Aristides

    2011-01-01

    An algorithm for automated analysis of in-situ NaI γ-ray spectra in the marine environment is presented. A standard wavelet denoising technique is implemented for obtaining a smoothed spectrum, while the stability of the energy spectrum is achieved by taking advantage of the permanent presence of two energy lines in the marine environment. The automated analysis provides peak detection, net area calculation, energy autocalibration, radionuclide identification and activity calculation. The results of the algorithm performance, presented for two different cases, show that analysis of short-term spectra with poor statistical information is considerably improved and that incorporation of further advancements could allow the use of the algorithm in early-warning marine radioactivity systems. - Highlights: → Algorithm for automated analysis of in-situ NaI γ-ray marine spectra. → Wavelet denoising technique provides smoothed spectra even at parts of the energy spectrum that exhibits strong statistical fluctuations. → Automated analysis provides peak detection, net area calculation, energy autocalibration, radionuclide identification and activity calculation. → Analysis of short-term spectra with poor statistical information is considerably improved.

  16. Application of content-based image compression to telepathology

    Science.gov (United States)

    Varga, Margaret J.; Ducksbury, Paul G.; Callagy, Grace

    2002-05-01

    Telepathology is a means of practicing pathology at a distance, viewing images on a computer display rather than directly through a microscope. Without compression, images take too long to transmit to a remote location and are very expensive to store for future examination. However, to date the use of compressed images in pathology remains controversial. This is because commercial image compression algorithms such as JPEG achieve data compression without knowledge of the diagnostic content. Often images are lossily compressed at the expense of corrupting informative content. None of the currently available lossy compression techniques are concerned with what information has been preserved and what data has been discarded. Their sole objective is to compress and transmit the images as fast as possible. By contrast, this paper presents a novel image compression technique, which exploits knowledge of the slide diagnostic content. This 'content based' approach combines visually lossless and lossy compression techniques, judiciously applying each in the appropriate context across an image so as to maintain 'diagnostic' information while still maximising the possible compression. Standard compression algorithms, e.g. wavelets, can still be used, but their use in a context sensitive manner can offer high compression ratios and preservation of diagnostically important information. When compared with lossless compression the novel content-based approach can potentially provide the same degree of information with a smaller amount of data. When compared with lossy compression it can provide more information for a given amount of compression. The precise gain in the compression performance depends on the application (e.g. database archive or second opinion consultation) and the diagnostic content of the images.

  17. Medical image compression and its application to TDIS-FILE equipment

    International Nuclear Information System (INIS)

    Tsubura, Shin-ichi; Nishihara, Eitaro; Iwai, Shunsuke

    1990-01-01

    In order to compress medical images for filing and communication, we have developed a compression algorithm which compresses images with remarkable quality using a high-pass filtering method. Hardware for this compression algorithm was also developed and applied to TDIS (total digital imaging system)-FILE equipment. In the future, hardware based on this algorithm will be developed for various types of diagnostic equipment and PACS. This technique has the following characteristics: (1) significant reduction of artifacts; (2) acceptable quality for clinical evaluation at 15:1 to 20:1 compression ratio; and (3) high-speed processing and compact hardware. (author)

  18. Performance Analysis of Embedded Zero Tree and Set Partitioning in Hierarchical Tree

    OpenAIRE

    Pardeep Singh; Nivedita; Dinesh Gupta; Sugandha Sharma

    2012-01-01

    Compressing an image is significantly different than compressing raw binary data. For this different compression algorithm are used to compress images. Discrete wavelet transform has been widely used to compress the image. Wavelet transform are very powerful compared to other transform because its ability to describe any type of signals both in time and frequency domain simultaneously. The proposed schemes investigate the performance evaluation of embedded zero tree and wavelet based compress...

  19. Toward a Better Compression for DNA Sequences Using Huffman Encoding.

    Science.gov (United States)

    Al-Okaily, Anas; Almarri, Badar; Al Yami, Sultan; Huang, Chun-Hsi

    2017-04-01

    Due to the significant amount of DNA data that are being generated by next-generation sequencing machines for genomes of lengths ranging from megabases to gigabases, there is an increasing need to compress such data to a less space and a faster transmission. Different implementations of Huffman encoding incorporating the characteristics of DNA sequences prove to better compress DNA data. These implementations center on the concepts of selecting frequent repeats so as to force a skewed Huffman tree, as well as the construction of multiple Huffman trees when encoding. The implementations demonstrate improvements on the compression ratios for five genomes with lengths ranging from 5 to 50 Mbp, compared with the standard Huffman tree algorithm. The research hence suggests an improvement on all such DNA sequence compression algorithms that use the conventional Huffman encoding. The research suggests an improvement on all DNA sequence compression algorithms that use the conventional Huffman encoding. Accompanying software is publicly available (AL-Okaily, 2016 ).

  20. Contextual Compression of Large-Scale Wind Turbine Array Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Gruchalla, Kenny M [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Brunhart-Lupo, Nicholas J [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Potter, Kristin C [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Clyne, John [National Center for Atmospheric Research (NCAR)

    2017-12-04

    Data sizes are becoming a critical issue particularly for HPC applications. We have developed a user-driven lossy wavelet-based storage model to facilitate the analysis and visualization of large-scale wind turbine array simulations. The model stores data as heterogeneous blocks of wavelet coefficients, providing high-fidelity access to user-defined data regions believed the most salient, while providing lower-fidelity access to less salient regions on a block-by-block basis. In practice, by retaining the wavelet coefficients as a function of feature saliency, we have seen data reductions in excess of 94 percent, while retaining lossless information in the turbine-wake regions most critical to analysis and providing enough (low-fidelity) contextual information in the upper atmosphere to track incoming coherent turbulent structures. Our contextual wavelet compression approach has allowed us to deliver interative visual analysis while providing the user control over where data loss, and thus reduction in accuracy, in the analysis occurs. We argue this reduced but contextualized representation is a valid approach and encourages contextual data management.

  1. [Medical image compression: a review].

    Science.gov (United States)

    Noreña, Tatiana; Romero, Eduardo

    2013-01-01

    Modern medicine is an increasingly complex activity , based on the evidence ; it consists of information from multiple sources : medical record text , sound recordings , images and videos generated by a large number of devices . Medical imaging is one of the most important sources of information since they offer comprehensive support of medical procedures for diagnosis and follow-up . However , the amount of information generated by image capturing gadgets quickly exceeds storage availability in radiology services , generating additional costs in devices with greater storage capacity . Besides , the current trend of developing applications in cloud computing has limitations, even though virtual storage is available from anywhere, connections are made through internet . In these scenarios the optimal use of information necessarily requires powerful compression algorithms adapted to medical activity needs . In this paper we present a review of compression techniques used for image storage , and a critical analysis of them from the point of view of their use in clinical settings.

  2. Image compression-encryption scheme based on hyper-chaotic system and 2D compressive sensing

    Science.gov (United States)

    Zhou, Nanrun; Pan, Shumin; Cheng, Shan; Zhou, Zhihong

    2016-08-01

    Most image encryption algorithms based on low-dimensional chaos systems bear security risks and suffer encryption data expansion when adopting nonlinear transformation directly. To overcome these weaknesses and reduce the possible transmission burden, an efficient image compression-encryption scheme based on hyper-chaotic system and 2D compressive sensing is proposed. The original image is measured by the measurement matrices in two directions to achieve compression and encryption simultaneously, and then the resulting image is re-encrypted by the cycle shift operation controlled by a hyper-chaotic system. Cycle shift operation can change the values of the pixels efficiently. The proposed cryptosystem decreases the volume of data to be transmitted and simplifies the keys distribution simultaneously as a nonlinear encryption system. Simulation results verify the validity and the reliability of the proposed algorithm with acceptable compression and security performance.

  3. The compressed word problem for groups

    CERN Document Server

    Lohrey, Markus

    2014-01-01

    The Compressed Word Problem for Groups provides a detailed exposition of known results on the compressed word problem, emphasizing efficient algorithms for the compressed word problem in various groups. The author presents the necessary background along with the most recent results on the compressed word problem to create a cohesive self-contained book accessible to computer scientists as well as mathematicians. Readers will quickly reach the frontier of current research which makes the book especially appealing for students looking for a currently active research topic at the intersection of group theory and computer science. The word problem introduced in 1910 by Max Dehn is one of the most important decision problems in group theory. For many groups, highly efficient algorithms for the word problem exist. In recent years, a new technique based on data compression for providing more efficient algorithms for word problems, has been developed, by representing long words over group generators in a compres...

  4. PRESS: A Novel Framework of Trajectory Compression in Road Networks

    OpenAIRE

    Song, Renchu; Sun, Weiwei; Zheng, Baihua; Zheng, Yu

    2014-01-01

    Location data becomes more and more important. In this paper, we focus on the trajectory data, and propose a new framework, namely PRESS (Paralleled Road-Network-Based Trajectory Compression), to effectively compress trajectory data under road network constraints. Different from existing work, PRESS proposes a novel representation for trajectories to separate the spatial representation of a trajectory from the temporal representation, and proposes a Hybrid Spatial Compression (HSC) algorithm ...

  5. CoGI: Towards Compressing Genomes as an Image.

    Science.gov (United States)

    Xie, Xiaojing; Zhou, Shuigeng; Guan, Jihong

    2015-01-01

    Genomic science is now facing an explosive increase of data thanks to the fast development of sequencing technology. This situation poses serious challenges to genomic data storage and transferring. It is desirable to compress data to reduce storage and transferring cost, and thus to boost data distribution and utilization efficiency. Up to now, a number of algorithms / tools have been developed for compressing genomic sequences. Unlike the existing algorithms, most of which treat genomes as one-dimensional text strings and compress them based on dictionaries or probability models, this paper proposes a novel approach called CoGI (the abbreviation of Compressing Genomes as an Image) for genome compression, which transforms the genomic sequences to a two-dimensional binary image (or bitmap), then applies a rectangular partition coding algorithm to compress the binary image. CoGI can be used as either a reference-based compressor or a reference-free compressor. For the former, we develop two entropy-based algorithms to select a proper reference genome. Performance evaluation is conducted on various genomes. Experimental results show that the reference-based CoGI significantly outperforms two state-of-the-art reference-based genome compressors GReEn and RLZ-opt in both compression ratio and compression efficiency. It also achieves comparable compression ratio but two orders of magnitude higher compression efficiency in comparison with XM--one state-of-the-art reference-free genome compressor. Furthermore, our approach performs much better than Gzip--a general-purpose and widely-used compressor, in both compression speed and compression ratio. So, CoGI can serve as an effective and practical genome compressor. The source code and other related documents of CoGI are available at: http://admis.fudan.edu.cn/projects/cogi.htm.

  6. A Compressive Superresolution Display

    KAUST Repository

    Heide, Felix; Gregson, James; Wetzstein, Gordon; Raskar, Ramesh; Heidrich, Wolfgang

    2014-01-01

    In this paper, we introduce a new compressive display architecture for superresolution image presentation that exploits co-design of the optical device configuration and compressive computation. Our display allows for superresolution, HDR, or glasses-free 3D presentation.

  7. A Compressive Superresolution Display

    KAUST Repository

    Heide, Felix

    2014-06-22

    In this paper, we introduce a new compressive display architecture for superresolution image presentation that exploits co-design of the optical device configuration and compressive computation. Our display allows for superresolution, HDR, or glasses-free 3D presentation.

  8. Optimization of Error-Bounded Lossy Compression for Hard-to-Compress HPC Data

    Energy Technology Data Exchange (ETDEWEB)

    Di, Sheng; Cappello, Franck

    2018-01-01

    Since today’s scientific applications are producing vast amounts of data, compressing them before storage/transmission is critical. Results of existing compressors show two types of HPC data sets: highly compressible and hard to compress. In this work, we carefully design and optimize the error-bounded lossy compression for hard-tocompress scientific data. We propose an optimized algorithm that can adaptively partition the HPC data into best-fit consecutive segments each having mutually close data values, such that the compression condition can be optimized. Another significant contribution is the optimization of shifting offset such that the XOR-leading-zero length between two consecutive unpredictable data points can be maximized. We finally devise an adaptive method to select the best-fit compressor at runtime for maximizing the compression factor. We evaluate our solution using 13 benchmarks based on real-world scientific problems, and we compare it with 9 other state-of-the-art compressors. Experiments show that our compressor can always guarantee the compression errors within the user-specified error bounds. Most importantly, our optimization can improve the compression factor effectively, by up to 49% for hard-tocompress data sets with similar compression/decompression time cost.

  9. Compressive multi-mode superresolution display

    KAUST Repository

    Heide, Felix; Gregson, James; Wetzstein, Gordon; Raskar, Ramesh D.; Heidrich, Wolfgang

    2014-01-01

    consists of readily-available components and is driven by a novel splitting algorithm that computes the pixel states from a target high-resolution image. In effect, the display pixels present a compressed representation of the target image that is perceived

  10. Zips : mining compressing sequential patterns in streams

    NARCIS (Netherlands)

    Hoang, T.L.; Calders, T.G.K.; Yang, J.; Mörchen, F.; Fradkin, D.; Chau, D.H.; Vreeken, J.; Leeuwen, van M.; Faloutsos, C.

    2013-01-01

    We propose a streaming algorithm, based on the minimal description length (MDL) principle, for extracting non-redundant sequential patterns. For static databases, the MDL-based approach that selects patterns based on their capacity to compress data rather than their frequency, was shown to be

  11. Parallel Recursive State Compression for Free

    NARCIS (Netherlands)

    Laarman, Alfons; van de Pol, Jan Cornelis; Weber, M.

    2011-01-01

    This paper focuses on reducing memory usage in enumerative model checking, while maintaining the multi-core scalability obtained in earlier work. We present a tree-based multi-core compression method, which works by leveraging sharing among sub-vectors of state vectors. An algorithmic analysis of

  12. Microbunching and RF Compression

    International Nuclear Information System (INIS)

    Venturini, M.; Migliorati, M.; Ronsivalle, C.; Ferrario, M.; Vaccarezza, C.

    2010-01-01

    Velocity bunching (or RF compression) represents a promising technique complementary to magnetic compression to achieve the high peak current required in the linac drivers for FELs. Here we report on recent progress aimed at characterizing the RF compression from the point of view of the microbunching instability. We emphasize the development of a linear theory for the gain function of the instability and its validation against macroparticle simulations that represents a useful tool in the evaluation of the compression schemes for FEL sources.

  13. A checkpoint compression study for high-performance computing systems

    Energy Technology Data Exchange (ETDEWEB)

    Ibtesham, Dewan [Univ. of New Mexico, Albuquerque, NM (United States). Dept. of Computer Science; Ferreira, Kurt B. [Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States). Scalable System Software Dept.; Arnold, Dorian [Univ. of New Mexico, Albuquerque, NM (United States). Dept. of Computer Science

    2015-02-17

    As high-performance computing systems continue to increase in size and complexity, higher failure rates and increased overheads for checkpoint/restart (CR) protocols have raised concerns about the practical viability of CR protocols for future systems. Previously, compression has proven to be a viable approach for reducing checkpoint data volumes and, thereby, reducing CR protocol overhead leading to improved application performance. In this article, we further explore compression-based CR optimization by exploring its baseline performance and scaling properties, evaluating whether improved compression algorithms might lead to even better application performance and comparing checkpoint compression against and alongside other software- and hardware-based optimizations. Our results highlights are: (1) compression is a very viable CR optimization; (2) generic, text-based compression algorithms appear to perform near optimally for checkpoint data compression and faster compression algorithms will not lead to better application performance; (3) compression-based optimizations fare well against and alongside other software-based optimizations; and (4) while hardware-based optimizations outperform software-based ones, they are not as cost effective.

  14. Compression evaluation of surgery video recordings retaining diagnostic credibility (compression evaluation of surgery video)

    Science.gov (United States)

    Duplaga, M.; Leszczuk, M. I.; Papir, Z.; Przelaskowski, A.

    2008-12-01

    Wider dissemination of medical digital video libraries is affected by two correlated factors, resource effective content compression that directly influences its diagnostic credibility. It has been proved that it is possible to meet these contradictory requirements halfway for long-lasting and low motion surgery recordings at compression ratios close to 100 (bronchoscopic procedures were a case study investigated). As the main supporting assumption, it has been accepted that the content can be compressed as far as clinicians are not able to sense a loss of video diagnostic fidelity (a visually lossless compression). Different market codecs were inspected by means of the combined subjective and objective tests toward their usability in medical video libraries. Subjective tests involved a panel of clinicians who had to classify compressed bronchoscopic video content according to its quality under the bubble sort algorithm. For objective tests, two metrics (hybrid vector measure and hosaka Plots) were calculated frame by frame and averaged over a whole sequence.

  15. Mining compressing sequential problems

    NARCIS (Netherlands)

    Hoang, T.L.; Mörchen, F.; Fradkin, D.; Calders, T.G.K.

    2012-01-01

    Compression based pattern mining has been successfully applied to many data mining tasks. We propose an approach based on the minimum description length principle to extract sequential patterns that compress a database of sequences well. We show that mining compressing patterns is NP-Hard and

  16. Compressive multi-mode superresolution display

    KAUST Repository

    Heide, Felix

    2014-01-01

    Compressive displays are an emerging technology exploring the co-design of new optical device configurations and compressive computation. Previously, research has shown how to improve the dynamic range of displays and facilitate high-quality light field or glasses-free 3D image synthesis. In this paper, we introduce a new multi-mode compressive display architecture that supports switching between 3D and high dynamic range (HDR) modes as well as a new super-resolution mode. The proposed hardware consists of readily-available components and is driven by a novel splitting algorithm that computes the pixel states from a target high-resolution image. In effect, the display pixels present a compressed representation of the target image that is perceived as a single, high resolution image. © 2014 Optical Society of America.

  17. Fast lossless compression via cascading Bloom filters.

    Science.gov (United States)

    Rozov, Roye; Shamir, Ron; Halperin, Eran

    2014-01-01

    Data from large Next Generation Sequencing (NGS) experiments present challenges both in terms of costs associated with storage and in time required for file transfer. It is sometimes possible to store only a summary relevant to particular applications, but generally it is desirable to keep all information needed to revisit experimental results in the future. Thus, the need for efficient lossless compression methods for NGS reads arises. It has been shown that NGS-specific compression schemes can improve results over generic compression methods, such as the Lempel-Ziv algorithm, Burrows-Wheeler transform, or Arithmetic Coding. When a reference genome is available, effective compression can be achieved by first aligning the reads to the reference genome, and then encoding each read using the alignment position combined with the differences in the read relative to the reference. These reference-based methods have been shown to compress better than reference-free schemes, but the alignment step they require demands several hours of CPU time on a typical dataset, whereas reference-free methods can usually compress in minutes. We present a new approach that achieves highly efficient compression by using a reference genome, but completely circumvents the need for alignment, affording a great reduction in the time needed to compress. In contrast to reference-based methods that first align reads to the genome, we hash all reads into Bloom filters to encode, and decode by querying the same Bloom filters using read-length subsequences of the reference genome. Further compression is achieved by using a cascade of such filters. Our method, called BARCODE, runs an order of magnitude faster than reference-based methods, while compressing an order of magnitude better than reference-free methods, over a broad range of sequencing coverage. In high coverage (50-100 fold), compared to the best tested compressors, BARCODE saves 80-90% of the running time while only increasing space

  18. SU-F-BRB-12: A Novel Haar Wavelet Based Approach to Deliver Non-Coplanar Intensity Modulated Radiotherapy Using Sparse Orthogonal Collimators

    Energy Technology Data Exchange (ETDEWEB)

    Nguyen, D; Ruan, D; Low, D; Sheng, K [Deparment of Radiation Oncology, University of California Los Angeles, Los Angeles, CA (United States); O’Connor, D [Deparment of Mathematics, University of California Los Angeles, Los Angeles, CA (United States); Boucher, S [RadiaBeam Technologies, Santa Monica, CA (United States)

    2015-06-15

    Purpose: Existing efforts to replace complex multileaf collimator (MLC) by simple jaws for intensity modulated radiation therapy (IMRT) resulted in unacceptable compromise in plan quality and delivery efficiency. We introduce a novel fluence map segmentation method based on compressed sensing for plan delivery using a simplified sparse orthogonal collimator (SOC) on the 4π non-coplanar radiotherapy platform. Methods: 4π plans with varying prescription doses were first created by automatically selecting and optimizing 20 non-coplanar beams for 2 GBM, 2 head & neck, and 2 lung patients. To create deliverable 4π plans using SOC, which are two pairs of orthogonal collimators with 1 to 4 leaves in each collimator bank, a Haar Fluence Optimization (HFO) method was used to regulate the number of Haar wavelet coefficients while maximizing the dose fidelity to the ideal prescription. The plans were directly stratified utilizing the optimized Haar wavelet rectangular basis. A matching number of deliverable segments were stratified for the MLC-based plans. Results: Compared to the MLC-based 4π plans, the SOC-based 4π plans increased the average PTV dose homogeneity from 0.811 to 0.913. PTV D98 and D99 were improved by 3.53% and 5.60% of the corresponding prescription doses. The average mean and maximal OAR doses slightly increased by 0.57% and 2.57% of the prescription doses. The average number of segments ranged between 5 and 30 per beam. The collimator travel time to create the segments decreased with increasing leaf numbers in the SOC. The two and four leaf designs were 1.71 and 1.93 times more efficient, on average, than the single leaf design. Conclusion: The innovative dose domain optimization based on compressed sensing enables uncompromised 4π non-coplanar IMRT dose delivery using simple rectangular segments that are deliverable using a sparse orthogonal collimator, which only requires 8 to 16 leaves yet is unlimited in modulation resolution. This work is

  19. Compression in Working Memory and Its Relationship With Fluid Intelligence.

    Science.gov (United States)

    Chekaf, Mustapha; Gauvrit, Nicolas; Guida, Alessandro; Mathy, Fabien

    2018-06-01

    Working memory has been shown to be strongly related to fluid intelligence; however, our goal is to shed further light on the process of information compression in working memory as a determining factor of fluid intelligence. Our main hypothesis was that compression in working memory is an excellent indicator for studying the relationship between working-memory capacity and fluid intelligence because both depend on the optimization of storage capacity. Compressibility of memoranda was estimated using an algorithmic complexity metric. The results showed that compressibility can be used to predict working-memory performance and that fluid intelligence is well predicted by the ability to compress information. We conclude that the ability to compress information in working memory is the reason why both manipulation and retention of information are linked to intelligence. This result offers a new concept of intelligence based on the idea that compression and intelligence are equivalent problems. Copyright © 2018 Cognitive Science Society, Inc.

  20. The Research and Improvement of SDT Algorithm for Historical Data in SCADA

    Directory of Open Access Journals (Sweden)

    Xu Xu-Dong

    2017-01-01

    Full Text Available With the rapid development of Internet of things and big data technology, the amount of data collected by SCADA(Supervisory Control And Data Acquisitionsystem is growing exponentially, which the traditional SDT algorithm can not meet the requirements of SCADA system for historical data compression. In this paper, ASDT(Advanced SDT algorithm based on SDT algorithm is proposed and implemented in the Java language, which is based on the deep research of the data compression method, especially the Swing Door Trending. ASDT algorithm through the sine curve fitting data to achieve data compression, compared with the performance of the traditional SDT algorithm, which it can achieve better compression results. The experimental results show that compared with the traditional SDT algorithm, the ASDT algorithm can improve the compression ratio in the case of no significant increase in the compression error, and the compression radio is increased by nearly 50%.

  1. Algorithming the Algorithm

    DEFF Research Database (Denmark)

    Mahnke, Martina; Uprichard, Emma

    2014-01-01

    Imagine sailing across the ocean. The sun is shining, vastness all around you. And suddenly [BOOM] you’ve hit an invisible wall. Welcome to the Truman Show! Ever since Eli Pariser published his thoughts on a potential filter bubble, this movie scenario seems to have become reality, just with slight...... changes: it’s not the ocean, it’s the internet we’re talking about, and it’s not a TV show producer, but algorithms that constitute a sort of invisible wall. Building on this assumption, most research is trying to ‘tame the algorithmic tiger’. While this is a valuable and often inspiring approach, we...

  2. High-speed and high-ratio referential genome compression.

    Science.gov (United States)

    Liu, Yuansheng; Peng, Hui; Wong, Limsoon; Li, Jinyan

    2017-11-01

    The rapidly increasing number of genomes generated by high-throughput sequencing platforms and assembly algorithms is accompanied by problems in data storage, compression and communication. Traditional compression algorithms are unable to meet the demand of high compression ratio due to the intrinsic challenging features of DNA sequences such as small alphabet size, frequent repeats and palindromes. Reference-based lossless compression, by which only the differences between two similar genomes are stored, is a promising approach with high compression ratio. We present a high-performance referential genome compression algorithm named HiRGC. It is based on a 2-bit encoding scheme and an advanced greedy-matching search on a hash table. We compare the performance of HiRGC with four state-of-the-art compression methods on a benchmark dataset of eight human genomes. HiRGC takes compress about 21 gigabytes of each set of the seven target genomes into 96-260 megabytes, achieving compression ratios of 217 to 82 times. This performance is at least 1.9 times better than the best competing algorithm on its best case. Our compression speed is also at least 2.9 times faster. HiRGC is stable and robust to deal with different reference genomes. In contrast, the competing methods' performance varies widely on different reference genomes. More experiments on 100 human genomes from the 1000 Genome Project and on genomes of several other species again demonstrate that HiRGC's performance is consistently excellent. The C ++ and Java source codes of our algorithm are freely available for academic and non-commercial use. They can be downloaded from https://github.com/yuansliu/HiRGC. jinyan.li@uts.edu.au. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  3. Efficient Joins with Compressed Bitmap Indexes

    Energy Technology Data Exchange (ETDEWEB)

    Computational Research Division; Madduri, Kamesh; Wu, Kesheng

    2009-08-19

    We present a new class of adaptive algorithms that use compressed bitmap indexes to speed up evaluation of the range join query in relational databases. We determine the best strategy to process a join query based on a fast sub-linear time computation of the join selectivity (the ratio of the number of tuples in the result to the total number of possible tuples). In addition, we use compressed bitmaps to represent the join output compactly: the space requirement for storing the tuples representing the join of two relations is asymptotically bounded by min(h; n . cb), where h is the number of tuple pairs in the result relation, n is the number of tuples in the smaller of the two relations, and cb is the cardinality of the larger column being joined. We present a theoretical analysis of our algorithms, as well as experimental results on large-scale synthetic and real data sets. Our implementations are efficient, and consistently outperform well-known approaches for a range of join selectivity factors. For instance, our count-only algorithm is up to three orders of magnitude faster than the sort-merge approach, and our best bitmap index-based algorithm is 1.2x-80x faster than the sort-merge algorithm, for various query instances. We achieve these speedups by exploiting several inherent performance advantages of compressed bitmap indexes for join processing: an implicit partitioning of the attributes, space-efficiency, and tolerance of high-cardinality relations.

  4. Compressed Subsequence Matching and Packed Tree Coloring

    DEFF Research Database (Denmark)

    Bille, Philip; Cording, Patrick Hagge; Gørtz, Inge Li

    2017-01-01

    We present a new algorithm for subsequence matching in grammar compressed strings. Given a grammar of size n compressing a string of size N and a pattern string of size m over an alphabet of size \\(\\sigma \\), our algorithm uses \\(O(n+\\frac{n\\sigma }{w})\\) space and \\(O(n+\\frac{n\\sigma }{w}+m\\log N\\log...... w\\cdot occ)\\) or \\(O(n+\\frac{n\\sigma }{w}\\log w+m\\log N\\cdot occ)\\) time. Here w is the word size and occ is the number of minimal occurrences of the pattern. Our algorithm uses less space than previous algorithms and is also faster for \\(occ=o(\\frac{n}{\\log N})\\) occurrences. The algorithm uses...... a new data structure that allows us to efficiently find the next occurrence of a given character after a given position in a compressed string. This data structure in turn is based on a new data structure for the tree color problem, where the node colors are packed in bit strings....

  5. Compression for radiological images

    Science.gov (United States)

    Wilson, Dennis L.

    1992-07-01

    The viewing of radiological images has peculiarities that must be taken into account in the design of a compression technique. The images may be manipulated on a workstation to change the contrast, to change the center of the brightness levels that are viewed, and even to invert the images. Because of the possible consequences of losing information in a medical application, bit preserving compression is used for the images used for diagnosis. However, for archiving the images may be compressed to 10 of their original size. A compression technique based on the Discrete Cosine Transform (DCT) takes the viewing factors into account by compressing the changes in the local brightness levels. The compression technique is a variation of the CCITT JPEG compression that suppresses the blocking of the DCT except in areas of very high contrast.

  6. Removal of muscle artifact from EEG data: comparison between stochastic (ICA and CCA) and deterministic (EMD and wavelet-based) approaches

    Science.gov (United States)

    Safieddine, Doha; Kachenoura, Amar; Albera, Laurent; Birot, Gwénaël; Karfoul, Ahmad; Pasnicu, Anca; Biraben, Arnaud; Wendling, Fabrice; Senhadji, Lotfi; Merlet, Isabelle

    2012-12-01

    Electroencephalographic (EEG) recordings are often contaminated with muscle artifacts. This disturbing myogenic activity not only strongly affects the visual analysis of EEG, but also most surely impairs the results of EEG signal processing tools such as source localization. This article focuses on the particular context of the contamination epileptic signals (interictal spikes) by muscle artifact, as EEG is a key diagnosis tool for this pathology. In this context, our aim was to compare the ability of two stochastic approaches of blind source separation, namely independent component analysis (ICA) and canonical correlation analysis (CCA), and of two deterministic approaches namely empirical mode decomposition (EMD) and wavelet transform (WT) to remove muscle artifacts from EEG signals. To quantitatively compare the performance of these four algorithms, epileptic spike-like EEG signals were simulated from two different source configurations and artificially contaminated with different levels of real EEG-recorded myogenic activity. The efficiency of CCA, ICA, EMD, and WT to correct the muscular artifact was evaluated both by calculating the normalized mean-squared error between denoised and original signals and by comparing the results of source localization obtained from artifact-free as well as noisy signals, before and after artifact correction. Tests on real data recorded in an epileptic patient are also presented. The results obtained in the context of simulations and real data show that EMD outperformed the three other algorithms for the denoising of data highly contaminated by muscular activity. For less noisy data, and when spikes arose from a single cortical source, the myogenic artifact was best corrected with CCA and ICA. Otherwise when spikes originated from two distinct sources, either EMD or ICA offered the most reliable denoising result for highly noisy data, while WT offered the better denoising result for less noisy data. These results suggest that

  7. Image compression of bone images

    International Nuclear Information System (INIS)

    Hayrapetian, A.; Kangarloo, H.; Chan, K.K.; Ho, B.; Huang, H.K.

    1989-01-01

    This paper reports a receiver operating characteristic (ROC) experiment conducted to compare the diagnostic performance of a compressed bone image with the original. The compression was done on custom hardware that implements an algorithm based on full-frame cosine transform. The compression ratio in this study is approximately 10:1, which was decided after a pilot experiment. The image set consisted of 45 hand images, including normal images and images containing osteomalacia and osteitis fibrosa. Each image was digitized with a laser film scanner to 2,048 x 2,048 x 8 bits. Six observers, all board-certified radiologists, participated in the experiment. For each ROC session, an independent ROC curve was constructed and the area under that curve calculated. The image set was randomized for each session, as was the order for viewing the original and reconstructed images. Analysis of variance was used to analyze the data and derive statistically significant results. The preliminary results indicate that the diagnostic quality of the reconstructed image is comparable to that of the original image

  8. Lightweight SIP/SDP compression scheme (LSSCS)

    Science.gov (United States)

    Wu, Jian J.; Demetrescu, Cristian

    2001-10-01

    In UMTS new IP based services with tight delay constraints will be deployed over the W-CDMA air interface such as IP multimedia and interactive services. To integrate the wireline and wireless IP services, 3GPP standard forum adopted the Session Initiation Protocol (SIP) as the call control protocol for the UMTS Release 5, which will implement next generation, all IP networks for real-time QoS services. In the current form the SIP protocol is not suitable for wireless transmission due to its large message size which will need either a big radio pipe for transmission or it will take far much longer to transmit than the current GSM Call Control (CC) message sequence. In this paper we present a novel compression algorithm called Lightweight SIP/SDP Compression Scheme (LSSCS), which acts at the SIP application layer and therefore removes the information redundancy before it is sent to the network and transport layer. A binary octet-aligned header is added to the compressed SIP/SDP message before sending it to the network layer. The receiver uses this binary header as well as the pre-cached information to regenerate the original SIP/SDP message. The key features of the LSSCS compression scheme are presented in this paper along with implementation examples. It is shown that this compression algorithm makes SIP transmission efficient over the radio interface without losing the SIP generality and flexibility.

  9. Halftoning processing on a JPEG-compressed image

    Science.gov (United States)

    Sibade, Cedric; Barizien, Stephane; Akil, Mohamed; Perroton, Laurent

    2003-12-01

    Digital image processing algorithms are usually designed for the raw format, that is on an uncompressed representation of the image. Therefore prior to transforming or processing a compressed format, decompression is applied; then, the result of the processing application is finally re-compressed for further transfer or storage. The change of data representation is resource-consuming in terms of computation, time and memory usage. In the wide format printing industry, this problem becomes an important issue: e.g. a 1 m2 input color image, scanned at 600 dpi exceeds 1.6 GB in its raw representation. However, some image processing algorithms can be performed in the compressed-domain, by applying an equivalent operation on the compressed format. This paper is presenting an innovative application of the halftoning processing operation by screening, to be applied on JPEG-compressed image. This compressed-domain transform is performed by computing the threshold operation of the screening algorithm in the DCT domain. This algorithm is illustrated by examples for different halftone masks. A pre-sharpening operation, applied on a JPEG-compressed low quality image is also described; it allows to de-noise and to enhance the contours of this image.

  10. Lossless Compression of Classification-Map Data

    Science.gov (United States)

    Hua, Xie; Klimesh, Matthew

    2009-01-01

    A lossless image-data-compression algorithm intended specifically for application to classification-map data is based on prediction, context modeling, and entropy coding. The algorithm was formulated, in consideration of the differences between classification maps and ordinary images of natural scenes, so as to be capable of compressing classification- map data more effectively than do general-purpose image-data-compression algorithms. Classification maps are typically generated from remote-sensing images acquired by instruments aboard aircraft (see figure) and spacecraft. A classification map is a synthetic image that summarizes information derived from one or more original remote-sensing image(s) of a scene. The value assigned to each pixel in such a map is the index of a class that represents some type of content deduced from the original image data for example, a type of vegetation, a mineral, or a body of water at the corresponding location in the scene. When classification maps are generated onboard the aircraft or spacecraft, it is desirable to compress the classification-map data in order to reduce the volume of data that must be transmitted to a ground station.

  11. HVS-based medical image compression

    Energy Technology Data Exchange (ETDEWEB)

    Kai Xie [Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, 200030 Shanghai (China)]. E-mail: xie_kai2001@sjtu.edu.cn; Jie Yang [Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, 200030 Shanghai (China); Min Zhuyue [CREATIS-CNRS Research Unit 5515 and INSERM Unit 630, 69621 Villeurbanne (France); Liang Lixiao [Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, 200030 Shanghai (China)

    2005-07-01

    Introduction: With the promotion and application of digital imaging technology in the medical domain, the amount of medical images has grown rapidly. However, the commonly used compression methods cannot acquire satisfying results. Methods: In this paper, according to the existed and stated experiments and conclusions, the lifting step approach is used for wavelet decomposition. The physical and anatomic structure of human vision is combined and the contrast sensitivity function (CSF) is introduced as the main research issue in human vision system (HVS), and then the main designing points of HVS model are presented. On the basis of multi-resolution analyses of wavelet transform, the paper applies HVS including the CSF characteristics to the inner correlation-removed transform and quantization in image and proposes a new HVS-based medical image compression model. Results: The experiments are done on the medical images including computed tomography (CT) and magnetic resonance imaging (MRI). At the same bit rate, the performance of SPIHT, with respect to the PSNR metric, is significantly higher than that of our algorithm. But the visual quality of the SPIHT-compressed image is roughly the same as that of the image compressed with our approach. Our algorithm obtains the same visual quality at lower bit rates and the coding/decoding time is less than that of SPIHT. Conclusions: The results show that under common objective conditions, our compression algorithm can achieve better subjective visual quality, and performs better than that of SPIHT in the aspects of compression ratios and coding/decoding time.

  12. HVS-based medical image compression

    International Nuclear Information System (INIS)

    Kai Xie; Jie Yang; Min Zhuyue; Liang Lixiao

    2005-01-01

    Introduction: With the promotion and application of digital imaging technology in the medical domain, the amount of medical images has grown rapidly. However, the commonly used compression methods cannot acquire satisfying results. Methods: In this paper, according to the existed and stated experiments and conclusions, the lifting step approach is used for wavelet decomposition. The physical and anatomic structure of human vision is combined and the contrast sensitivity function (CSF) is introduced as the main research issue in human vision system (HVS), and then the main designing points of HVS model are presented. On the basis of multi-resolution analyses of wavelet transform, the paper applies HVS including the CSF characteristics to the inner correlation-removed transform and quantization in image and proposes a new HVS-based medical image compression model. Results: The experiments are done on the medical images including computed tomography (CT) and magnetic resonance imaging (MRI). At the same bit rate, the performance of SPIHT, with respect to the PSNR metric, is significantly higher than that of our algorithm. But the visual quality of the SPIHT-compressed image is roughly the same as that of the image compressed with our approach. Our algorithm obtains the same visual quality at lower bit rates and the coding/decoding time is less than that of SPIHT. Conclusions: The results show that under common objective conditions, our compression algorithm can achieve better subjective visual quality, and performs better than that of SPIHT in the aspects of compression ratios and coding/decoding time

  13. 2D-RBUC for efficient parallel compression of residuals

    Science.gov (United States)

    Đurđević, Đorđe M.; Tartalja, Igor I.

    2018-02-01

    In this paper, we present a method for lossless compression of residuals with an efficient SIMD parallel decompression. The residuals originate from lossy or near lossless compression of height fields, which are commonly used to represent models of terrains. The algorithm is founded on the existing RBUC method for compression of non-uniform data sources. We have adapted the method to capture 2D spatial locality of height fields, and developed the data decompression algorithm for modern GPU architectures already present even in home computers. In combination with the point-level SIMD-parallel lossless/lossy high field compression method HFPaC, characterized by fast progressive decompression and seamlessly reconstructed surface, the newly proposed method trades off small efficiency degradation for a non negligible compression ratio (measured up to 91%) benefit.

  14. Lossless compression for 3D PET

    International Nuclear Information System (INIS)

    Macq, B.; Sibomana, M.; Coppens, A.; Bol, A.; Michel, C.

    1994-01-01

    A new adaptive scheme is proposed for the lossless compression of positron emission tomography (PET) sinogram data. The algorithm uses an adaptive differential pulse code modulator (ADPCM) followed by a universal variable length coder (UVLC). Contrasting with Lempel-Ziv (LZ), which operates on a whole sinogram, UVLC operates very efficiently on short data blocks. This is a major advantage for real-time implementation. The algorithm is adaptive and codes data after some on-line estimations of the statistics inside each block. Its efficiency is tested when coding dynamic and static scans from two PET scanners and reaches asymptotically the entropy limit for long frames. For very short 3D frames, the new algorithm is twice more efficient than LZ. Since an ASIC implementing a similar UVLC scheme is available today, a similar one should be able to sustain PET data lossless compression and decompression at a rate of 27 MBytes/sec. This algorithm is consequently a good candidate for the next generation of lossless compression engine

  15. Lossless compression for 3D PET

    International Nuclear Information System (INIS)

    Macq, B.; Sibomana, M.; Coppens, A.; Bol, A.; Michel, C.; Baker, K.; Jones, B.

    1994-01-01

    A new adaptive scheme is proposed for the lossless compression of positron emission tomography (PET) sinogram data. The algorithm uses an adaptive differential pulse code modulator (ADPCM) followed by a universal variable length coder (UVLC). Contrasting with Lempel-Ziv (LZ), which operates on a whole sinogram, UVLC operates very efficiently on short data blocks. This is a major advantage for real-time implementation. The algorithms is adaptive and codes data after some on-line estimations of the statistics inside each block. Its efficiency is tested when coding dynamic and static scans from two PET scanners and reaches asymptotically the entropy limit for long frames. For very short 3D frames, the new algorithm is twice more efficient than LZ. Since an application specific integrated circuit (ASIC) implementing a similar UVLC scheme is available today, a similar one should be able to sustain PET data lossless compression and decompression at a rate of 27 MBytes/sec. This algorithm is consequently a good candidate for the next generation of lossless compression engine

  16. Lossless compression of hyperspectral images with pre-byte processing and intra-bands correlation

    OpenAIRE

    Sarinova, Assiya; Zamyatin, Alexander; Cabral, Pedro

    2015-01-01

    This paper considers an approach to the compression of hyperspectral remote sensing data by an original multistage algorithm to increase the compression ratio using auxiliary data processing with its byte representation as well as with its intra-bands correlation. A set of the experimental results for the proposed approach of effectiveness estimation and its comparison with the well-known universal and specialized compression algorithms is presented. Este documento se refiere a la compresi...

  17. Sound algorithms

    OpenAIRE

    De Götzen , Amalia; Mion , Luca; Tache , Olivier

    2007-01-01

    International audience; We call sound algorithms the categories of algorithms that deal with digital sound signal. Sound algorithms appeared in the very infancy of computer. Sound algorithms present strong specificities that are the consequence of two dual considerations: the properties of the digital sound signal itself and its uses, and the properties of auditory perception.

  18. Genetic algorithms

    Science.gov (United States)

    Wang, Lui; Bayer, Steven E.

    1991-01-01

    Genetic algorithms are mathematical, highly parallel, adaptive search procedures (i.e., problem solving methods) based loosely on the processes of natural genetics and Darwinian survival of the fittest. Basic genetic algorithms concepts are introduced, genetic algorithm applications are introduced, and results are presented from a project to develop a software tool that will enable the widespread use of genetic algorithm technology.

  19. Algorithmic Relative Complexity

    Directory of Open Access Journals (Sweden)

    Daniele Cerra

    2011-04-01

    Full Text Available Information content and compression are tightly related concepts that can be addressed through both classical and algorithmic information theories, on the basis of Shannon entropy and Kolmogorov complexity, respectively. The definition of several entities in Kolmogorov’s framework relies upon ideas from classical information theory, and these two approaches share many common traits. In this work, we expand the relations between these two frameworks by introducing algorithmic cross-complexity and relative complexity, counterparts of the cross-entropy and relative entropy (or Kullback-Leibler divergence found in Shannon’s framework. We define the cross-complexity of an object x with respect to another object y as the amount of computational resources needed to specify x in terms of y, and the complexity of x related to y as the compression power which is lost when adopting such a description for x, compared to the shortest representation of x. Properties of analogous quantities in classical information theory hold for these new concepts. As these notions are incomputable, a suitable approximation based upon data compression is derived to enable the application to real data, yielding a divergence measure applicable to any pair of strings. Example applications are outlined, involving authorship attribution and satellite image classification, as well as a comparison to similar established techniques.

  20. Anisotropic Concrete Compressive Strength

    DEFF Research Database (Denmark)

    Gustenhoff Hansen, Søren; Jørgensen, Henrik Brøner; Hoang, Linh Cao

    2017-01-01

    When the load carrying capacity of existing concrete structures is (re-)assessed it is often based on compressive strength of cores drilled out from the structure. Existing studies show that the core compressive strength is anisotropic; i.e. it depends on whether the cores are drilled parallel...

  1. Experiments with automata compression

    NARCIS (Netherlands)

    Daciuk, J.; Yu, S; Daley, M; Eramian, M G

    2001-01-01

    Several compression methods of finite-state automata are presented and evaluated. Most compression methods used here are already described in the literature. However, their impact on the size of automata has not been described yet. We fill that gap, presenting results of experiments carried out on

  2. COMPRESSING BIOMEDICAL IMAGE BY USING INTEGER WAVELET TRANSFORM AND PREDICTIVE ENCODER

    OpenAIRE

    Anushree Srivastava*, Narendra Kumar Chaurasia

    2016-01-01

    Image compression has become an important process in today’s world of information exchange. It helps in effective utilization of high speed network resources. Medical image compression has an important role in medical field because they are used for future reference of patients. Medical data is compressed in such a way so that the diagnostics capabilities are not compromised or no medical information is lost. Medical imaging poses the great challenge of having compression algorithms that redu...

  3. Low-Complexity Lossless and Near-Lossless Data Compression Technique for Multispectral Imagery

    Science.gov (United States)

    Xie, Hua; Klimesh, Matthew A.

    2009-01-01

    This work extends the lossless data compression technique described in Fast Lossless Compression of Multispectral- Image Data, (NPO-42517) NASA Tech Briefs, Vol. 30, No. 8 (August 2006), page 26. The original technique was extended to include a near-lossless compression option, allowing substantially smaller compressed file sizes when a small amount of distortion can be tolerated. Near-lossless compression is obtained by including a quantization step prior to encoding of prediction residuals. The original technique uses lossless predictive compression and is designed for use on multispectral imagery. A lossless predictive data compression algorithm compresses a digitized signal one sample at a time as follows: First, a sample value is predicted from previously encoded samples. The difference between the actual sample value and the prediction is called the prediction residual. The prediction residual is encoded into the compressed file. The decompressor can form the same predicted sample and can decode the prediction residual from the compressed file, and so can reconstruct the original sample. A lossless predictive compression algorithm can generally be converted to a near-lossless compression algorithm by quantizing the prediction residuals prior to encoding them. In this case, since the reconstructed sample values will not be identical to the original sample values, the encoder must determine the values that will be reconstructed and use these values for predicting later sample values. The technique described here uses this method, starting with the original technique, to allow near-lossless compression. The extension to allow near-lossless compression adds the ability to achieve much more compression when small amounts of distortion are tolerable, while retaining the low complexity and good overall compression effectiveness of the original algorithm.

  4. A method of loss free compression for the data of nuclear spectrum

    International Nuclear Information System (INIS)

    Sun Mingshan; Wu Shiying; Chen Yantao; Xu Zurun

    2000-01-01

    A new method of loss free compression based on the feature of the data of nuclear spectrum is provided, from which a practicable algorithm is successfully derived. A compression rate varying from 0.50 to 0.25 is obtained and the distribution of the processed data becomes even more suitable to be reprocessed by another compression such as Huffman Code to improve the compression rate

  5. A novel algorithm for discrimination between inrush current and internal faults in power transformer differential protection based on discrete wavelet transform

    Energy Technology Data Exchange (ETDEWEB)

    Eldin, A.A. Hossam; Refaey, M.A. [Electrical Engineering Department, Alexandria University, Alexandria (Egypt)

    2011-01-15

    This paper proposes a novel methodology for transformer differential protection, based on wave shape recognition of the discriminating criterion extracted of the instantaneous differential currents. Discrete wavelet transform has been applied to the differential currents due to internal fault and inrush currents. The diagnosis criterion is based on median absolute deviation (MAD) of wavelet coefficients over a specified frequency band. The proposed algorithm is examined using various simulated inrush and internal fault current cases on a power transformer that has been modeled using electromagnetic transients program EMTDC software. Results of evaluation study show that, proposed wavelet based differential protection scheme can discriminate internal faults from inrush currents. (author)

  6. Research of Block-Based Motion Estimation Methods for Video Compression

    Directory of Open Access Journals (Sweden)

    Tropchenko Andrey

    2016-08-01

    Full Text Available This work is a review of the block-based algorithms used for motion estimation in video compression. It researches different types of block-based algorithms that range from the simplest named Full Search to the fast adaptive algorithms like Hierarchical Search. The algorithms evaluated in this paper are widely accepted by the video compressing community and have been used in implementing various standards, such as MPEG-4 Visual and H.264. The work also presents a very brief introduction to the entire flow of video compression.

  7. Blind compressive sensing dynamic MRI

    Science.gov (United States)

    Lingala, Sajan Goud; Jacob, Mathews

    2013-01-01

    We propose a novel blind compressive sensing (BCS) frame work to recover dynamic magnetic resonance images from undersampled measurements. This scheme models the dynamic signal as a sparse linear combination of temporal basis functions, chosen from a large dictionary. In contrast to classical compressed sensing, the BCS scheme simultaneously estimates the dictionary and the sparse coefficients from the undersampled measurements. Apart from the sparsity of the coefficients, the key difference of the BCS scheme with current low rank methods is the non-orthogonal nature of the dictionary basis functions. Since the number of degrees of freedom of the BCS model is smaller than that of the low-rank methods, it provides improved reconstructions at high acceleration rates. We formulate the reconstruction as a constrained optimization problem; the objective function is the linear combination of a data consistency term and sparsity promoting ℓ1 prior of the coefficients. The Frobenius norm dictionary constraint is used to avoid scale ambiguity. We introduce a simple and efficient majorize-minimize algorithm, which decouples the original criterion into three simpler sub problems. An alternating minimization strategy is used, where we cycle through the minimization of three simpler problems. This algorithm is seen to be considerably faster than approaches that alternates between sparse coding and dictionary estimation, as well as the extension of K-SVD dictionary learning scheme. The use of the ℓ1 penalty and Frobenius norm dictionary constraint enables the attenuation of insignificant basis functions compared to the ℓ0 norm and column norm constraint assumed in most dictionary learning algorithms; this is especially important since the number of basis functions that can be reliably estimated is restricted by the available measurements. We also observe that the proposed scheme is more robust to local minima compared to K-SVD method, which relies on greedy sparse coding

  8. Subcubic Control Flow Analysis Algorithms

    DEFF Research Database (Denmark)

    Midtgaard, Jan; Van Horn, David

    We give the first direct subcubic algorithm for performing control flow analysis of higher-order functional programs. Despite the long held belief that inclusion-based flow analysis could not surpass the ``cubic bottleneck, '' we apply known set compression techniques to obtain an algorithm...... that runs in time O(n^3/log n) on a unit cost random-access memory model machine. Moreover, we refine the initial flow analysis into two more precise analyses incorporating notions of reachability. We give subcubic algorithms for these more precise analyses and relate them to an existing analysis from...

  9. Biomedical sensor design using analog compressed sensing

    Science.gov (United States)

    Balouchestani, Mohammadreza; Krishnan, Sridhar

    2015-05-01

    The main drawback of current healthcare systems is the location-specific nature of the system due to the use of fixed/wired biomedical sensors. Since biomedical sensors are usually driven by a battery, power consumption is the most important factor determining the life of a biomedical sensor. They are also restricted by size, cost, and transmission capacity. Therefore, it is important to reduce the load of sampling by merging the sampling and compression steps to reduce the storage usage, transmission times, and power consumption in order to expand the current healthcare systems to Wireless Healthcare Systems (WHSs). In this work, we present an implementation of a low-power biomedical sensor using analog Compressed Sensing (CS) framework for sparse biomedical signals that addresses both the energy and telemetry bandwidth constraints of wearable and wireless Body-Area Networks (BANs). This architecture enables continuous data acquisition and compression of biomedical signals that are suitable for a variety of diagnostic and treatment purposes. At the transmitter side, an analog-CS framework is applied at the sensing step before Analog to Digital Converter (ADC) in order to generate the compressed version of the input analog bio-signal. At the receiver side, a reconstruction algorithm based on Restricted Isometry Property (RIP) condition is applied in order to reconstruct the original bio-signals form the compressed bio-signals with high probability and enough accuracy. We examine the proposed algorithm with healthy and neuropathy surface Electromyography (sEMG) signals. The proposed algorithm achieves a good level for Average Recognition Rate (ARR) at 93% and reconstruction accuracy at 98.9%. In addition, The proposed architecture reduces total computation time from 32 to 11.5 seconds at sampling-rate=29 % of Nyquist rate, Percentage Residual Difference (PRD)=26 %, Root Mean Squared Error (RMSE)=3 %.

  10. Space-Efficient Re-Pair Compression

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li; Prezza, Nicola

    2017-01-01

    Re-Pair [5] is an effective grammar-based compression scheme achieving strong compression rates in practice. Let n, σ, and d be the text length, alphabet size, and dictionary size of the final grammar, respectively. In their original paper, the authors show how to compute the Re-Pair grammar...... in expected linear time and 5n + 4σ2 + 4d + √n words of working space on top of the text. In this work, we propose two algorithms improving on the space of their original solution. Our model assumes a memory word of [log2 n] bits and a re-writable input text composed by n such words. Our first algorithm runs...

  11. Light-weight reference-based compression of FASTQ data.

    Science.gov (United States)

    Zhang, Yongpeng; Li, Linsen; Yang, Yanli; Yang, Xiao; He, Shan; Zhu, Zexuan

    2015-06-09

    The exponential growth of next generation sequencing (NGS) data has posed big challenges to data storage, management and archive. Data compression is one of the effective solutions, where reference-based compression strategies can typically achieve superior compression ratios compared to the ones not relying on any reference. This paper presents a lossless light-weight reference-based compression algorithm namely LW-FQZip to compress FASTQ data. The three components of any given input, i.e., metadata, short reads and quality score strings, are first parsed into three data streams in which the redundancy information are identified and eliminated independently. Particularly, well-designed incremental and run-length-limited encoding schemes are utilized to compress the metadata and quality score streams, respectively. To handle the short reads, LW-FQZip uses a novel light-weight mapping model to fast map them against external reference sequence(s) and produce concise alignment results for storage. The three processed data streams are then packed together with some general purpose compression algorithms like LZMA. LW-FQZip was evaluated on eight real-world NGS data sets and achieved compression ratios in the range of 0.111-0.201. This is comparable or superior to other state-of-the-art lossless NGS data compression algorithms. LW-FQZip is a program that enables efficient lossless FASTQ data compression. It contributes to the state of art applications for NGS data storage and transmission. LW-FQZip is freely available online at: http://csse.szu.edu.cn/staff/zhuzx/LWFQZip.

  12. Algorithmic cryptanalysis

    CERN Document Server

    Joux, Antoine

    2009-01-01

    Illustrating the power of algorithms, Algorithmic Cryptanalysis describes algorithmic methods with cryptographically relevant examples. Focusing on both private- and public-key cryptographic algorithms, it presents each algorithm either as a textual description, in pseudo-code, or in a C code program.Divided into three parts, the book begins with a short introduction to cryptography and a background chapter on elementary number theory and algebra. It then moves on to algorithms, with each chapter in this section dedicated to a single topic and often illustrated with simple cryptographic applic

  13. A new hyperspectral image compression paradigm based on fusion

    Science.gov (United States)

    Guerra, Raúl; Melián, José; López, Sebastián.; Sarmiento, Roberto

    2016-10-01

    The on-board compression of remote sensed hyperspectral images is an important task nowadays. One of the main difficulties is that the compression of these images must be performed in the satellite which carries the hyperspectral sensor. Hence, this process must be performed by space qualified hardware, having area, power and speed limitations. Moreover, it is important to achieve high compression ratios without compromising the quality of the decompress image. In this manuscript we proposed a new methodology for compressing hyperspectral images based on hyperspectral image fusion concepts. The proposed compression process has two independent steps. The first one is to spatially degrade the remote sensed hyperspectral image to obtain a low resolution hyperspectral image. The second step is to spectrally degrade the remote sensed hyperspectral image to obtain a high resolution multispectral image. These two degraded images are then send to the earth surface, where they must be fused using a fusion algorithm for hyperspectral and multispectral image, in order to recover the remote sensed hyperspectral image. The main advantage of the proposed methodology for compressing remote sensed hyperspectral images is that the compression process, which must be performed on-board, becomes very simple, being the fusion process used to reconstruct image the more complex one. An extra advantage is that the compression ratio can be fixed in advanced. Many simulations have been performed using different fusion algorithms and different methodologies for degrading the hyperspectral image. The results obtained in the simulations performed corroborate the benefits of the proposed methodology.

  14. Dynamical Functional Theory for Compressed Sensing

    DEFF Research Database (Denmark)

    Cakmak, Burak; Opper, Manfred; Winther, Ole

    2017-01-01

    the Thouless Anderson-Palmer (TAP) equations corresponding to the ensemble. Using a dynamical functional approach we are able to derive an effective stochastic process for the marginal statistics of a single component of the dynamics. This allows us to design memory terms in the algorithm in such a way...... that the resulting fields become Gaussian random variables allowing for an explicit analysis. The asymptotic statistics of these fields are consistent with the replica ansatz of the compressed sensing problem....

  15. Algorithmic mathematics

    CERN Document Server

    Hougardy, Stefan

    2016-01-01

    Algorithms play an increasingly important role in nearly all fields of mathematics. This book allows readers to develop basic mathematical abilities, in particular those concerning the design and analysis of algorithms as well as their implementation. It presents not only fundamental algorithms like the sieve of Eratosthenes, the Euclidean algorithm, sorting algorithms, algorithms on graphs, and Gaussian elimination, but also discusses elementary data structures, basic graph theory, and numerical questions. In addition, it provides an introduction to programming and demonstrates in detail how to implement algorithms in C++. This textbook is suitable for students who are new to the subject and covers a basic mathematical lecture course, complementing traditional courses on analysis and linear algebra. Both authors have given this "Algorithmic Mathematics" course at the University of Bonn several times in recent years.

  16. Compressing Aviation Data in XML Format

    Science.gov (United States)

    Patel, Hemil; Lau, Derek; Kulkarni, Deepak

    2003-01-01

    Design, operations and maintenance activities in aviation involve analysis of variety of aviation data. This data is typically in disparate formats making it difficult to use with different software packages. Use of a self-describing and extensible standard called XML provides a solution to this interoperability problem. XML provides a standardized language for describing the contents of an information stream, performing the same kind of definitional role for Web content as a database schema performs for relational databases. XML data can be easily customized for display using Extensible Style Sheets (XSL). While self-describing nature of XML makes it easy to reuse, it also increases the size of data significantly. Therefore, transfemng a dataset in XML form can decrease throughput and increase data transfer time significantly. It also increases storage requirements significantly. A natural solution to the problem is to compress the data using suitable algorithm and transfer it in the compressed form. We found that XML-specific compressors such as Xmill and XMLPPM generally outperform traditional compressors. However, optimal use of Xmill requires of discovery of optimal options to use while running Xmill. This, in turn, depends on the nature of data used. Manual disc0ver.y of optimal setting can require an engineer to experiment for weeks. We have devised an XML compression advisory tool that can analyze sample data files and recommend what compression tool would work the best for this data and what are the optimal settings to be used with a XML compression tool.

  17. Iris Recognition: The Consequences of Image Compression

    Directory of Open Access Journals (Sweden)

    Bishop DanielA

    2010-01-01

    Full Text Available Iris recognition for human identification is one of the most accurate biometrics, and its employment is expanding globally. The use of portable iris systems, particularly in law enforcement applications, is growing. In many of these applications, the portable device may be required to transmit an iris image or template over a narrow-bandwidth communication channel. Typically, a full resolution image (e.g., VGA is desired to ensure sufficient pixels across the iris to be confident of accurate recognition results. To minimize the time to transmit a large amount of data over a narrow-bandwidth communication channel, image compression can be used to reduce the file size of the iris image. In other applications, such as the Registered Traveler program, an entire iris image is stored on a smart card, but only 4 kB is allowed for the iris image. For this type of application, image compression is also the solution. This paper investigates the effects of image compression on recognition system performance using a commercial version of the Daugman iris2pi algorithm along with JPEG-2000 compression, and links these to image quality. Using the ICE 2005 iris database, we find that even in the face of significant compression, recognition performance is minimally affected.

  18. Iris Recognition: The Consequences of Image Compression

    Science.gov (United States)

    Ives, Robert W.; Bishop, Daniel A.; Du, Yingzi; Belcher, Craig

    2010-12-01

    Iris recognition for human identification is one of the most accurate biometrics, and its employment is expanding globally. The use of portable iris systems, particularly in law enforcement applications, is growing. In many of these applications, the portable device may be required to transmit an iris image or template over a narrow-bandwidth communication channel. Typically, a full resolution image (e.g., VGA) is desired to ensure sufficient pixels across the iris to be confident of accurate recognition results. To minimize the time to transmit a large amount of data over a narrow-bandwidth communication channel, image compression can be used to reduce the file size of the iris image. In other applications, such as the Registered Traveler program, an entire iris image is stored on a smart card, but only 4 kB is allowed for the iris image. For this type of application, image compression is also the solution. This paper investigates the effects of image compression on recognition system performance using a commercial version of the Daugman iris2pi algorithm along with JPEG-2000 compression, and links these to image quality. Using the ICE 2005 iris database, we find that even in the face of significant compression, recognition performance is minimally affected.

  19. Total algorithms

    NARCIS (Netherlands)

    Tel, G.

    We define the notion of total algorithms for networks of processes. A total algorithm enforces that a "decision" is taken by a subset of the processes, and that participation of all processes is required to reach this decision. Total algorithms are an important building block in the design of

  20. Particle algorithms for population dynamics in flows

    International Nuclear Information System (INIS)

    Perlekar, Prasad; Toschi, Federico; Benzi, Roberto; Pigolotti, Simone

    2011-01-01

    We present and discuss particle based algorithms to numerically study the dynamics of population subjected to an advecting flow condition. We discuss few possible variants of the algorithms and compare them in a model compressible flow. A comparison against appropriate versions of the continuum stochastic Fisher equation (sFKPP) is also presented and discussed. The algorithms can be used to study populations genetics in fluid environments.

  1. Generation new MP3 data set after compression

    Science.gov (United States)

    Atoum, Mohammed Salem; Almahameed, Mohammad

    2016-02-01

    The success of audio steganography techniques is to ensure imperceptibility of the embedded secret message in stego file and withstand any form of intentional or un-intentional degradation of secret message (robustness). Crucial to that using digital audio file such as MP3 file, which comes in different compression rate, however research studies have shown that performing steganography in MP3 format after compression is the most suitable one. Unfortunately until now the researchers can not test and implement their algorithm because no standard data set in MP3 file after compression is generated. So this paper focuses to generate standard data set with different compression ratio and different Genre to help researchers to implement their algorithms.

  2. Dynamic CT perfusion image data compression for efficient parallel processing.

    Science.gov (United States)

    Barros, Renan Sales; Olabarriaga, Silvia Delgado; Borst, Jordi; van Walderveen, Marianne A A; Posthuma, Jorrit S; Streekstra, Geert J; van Herk, Marcel; Majoie, Charles B L M; Marquering, Henk A

    2016-03-01

    The increasing size of medical imaging data, in particular time series such as CT perfusion (CTP), requires new and fast approaches to deliver timely results for acute care. Cloud architectures based on graphics processing units (GPUs) can provide the processing capacity required for delivering fast results. However, the size of CTP datasets makes transfers to cloud infrastructures time-consuming and therefore not suitable in acute situations. To reduce this transfer time, this work proposes a fast and lossless compression algorithm for CTP data. The algorithm exploits redundancies in the temporal dimension and keeps random read-only access to the image elements directly from the compressed data on the GPU. To the best of our knowledge, this is the first work to present a GPU-ready method for medical image compression with random access to the image elements from the compressed data.

  3. Quantum autoencoders for efficient compression of quantum data

    Science.gov (United States)

    Romero, Jonathan; Olson, Jonathan P.; Aspuru-Guzik, Alan

    2017-12-01

    Classical autoencoders are neural networks that can learn efficient low-dimensional representations of data in higher-dimensional space. The task of an autoencoder is, given an input x, to map x to a lower dimensional point y such that x can likely be recovered from y. The structure of the underlying autoencoder network can be chosen to represent the data on a smaller dimension, effectively compressing the input. Inspired by this idea, we introduce the model of a quantum autoencoder to perform similar tasks on quantum data. The quantum autoencoder is trained to compress a particular data set of quantum states, where a classical compression algorithm cannot be employed. The parameters of the quantum autoencoder are trained using classical optimization algorithms. We show an example of a simple programmable circuit that can be trained as an efficient autoencoder. We apply our model in the context of quantum simulation to compress ground states of the Hubbard model and molecular Hamiltonians.

  4. Efficient two-dimensional compressive sensing in MIMO radar

    Science.gov (United States)

    Shahbazi, Nafiseh; Abbasfar, Aliazam; Jabbarian-Jahromi, Mohammad

    2017-12-01

    Compressive sensing (CS) has been a way to lower sampling rate leading to data reduction for processing in multiple-input multiple-output (MIMO) radar systems. In this paper, we further reduce the computational complexity of a pulse-Doppler collocated MIMO radar by introducing a two-dimensional (2D) compressive sensing. To do so, we first introduce a new 2D formulation for the compressed received signals and then we propose a new measurement matrix design for our 2D compressive sensing model that is based on minimizing the coherence of sensing matrix using gradient descent algorithm. The simulation results show that our proposed 2D measurement matrix design using gradient decent algorithm (2D-MMDGD) has much lower computational complexity compared to one-dimensional (1D) methods while having better performance in comparison with conventional methods such as Gaussian random measurement matrix.

  5. Compressive laser ranging.

    Science.gov (United States)

    Babbitt, Wm Randall; Barber, Zeb W; Renner, Christoffer

    2011-12-15

    Compressive sampling has been previously proposed as a technique for sampling radar returns and determining sparse range profiles with a reduced number of measurements compared to conventional techniques. By employing modulation on both transmission and reception, compressive sensing in ranging is extended to the direct measurement of range profiles without intermediate measurement of the return waveform. This compressive ranging approach enables the use of pseudorandom binary transmit waveforms and return modulation, along with low-bandwidth optical detectors to yield high-resolution ranging information. A proof-of-concept experiment is presented. With currently available compact, off-the-shelf electronics and photonics, such as high data rate binary pattern generators and high-bandwidth digital optical modulators, compressive laser ranging can readily achieve subcentimeter resolution in a compact, lightweight package.

  6. Lossless medical image compression using geometry-adaptive partitioning and least square-based prediction.

    Science.gov (United States)

    Song, Xiaoying; Huang, Qijun; Chang, Sheng; He, Jin; Wang, Hao

    2018-06-01

    To improve the compression rates for lossless compression of medical images, an efficient algorithm, based on irregular segmentation and region-based prediction, is proposed in this paper. Considering that the first step of a region-based compression algorithm is segmentation, this paper proposes a hybrid method by combining geometry-adaptive partitioning and quadtree partitioning to achieve adaptive irregular segmentation for medical images. Then, least square (LS)-based predictors are adaptively designed for each region (regular subblock or irregular subregion). The proposed adaptive algorithm not only exploits spatial correlation between pixels but it utilizes local structure similarity, resulting in efficient compression performance. Experimental results show that the average compression performance of the proposed algorithm is 10.48, 4.86, 3.58, and 0.10% better than that of JPEG 2000, CALIC, EDP, and JPEG-LS, respectively. Graphical abstract ᅟ.

  7. Data compression techniques and the ACR-NEMA digital interface communications standard

    International Nuclear Information System (INIS)

    Zielonka, J.S.; Blume, H.; Hill, D.; Horil, S.C.; Lodwick, G.S.; Moore, J.; Murphy, L.L.; Wake, R.; Wallace, G.

    1987-01-01

    Data compression offers the possibility of achieving high, effective information transfer rates between devices and of efficient utilization of digital storge devices in meeting department-wide archiving needs. Accordingly, the ARC-NEMA Digital Imaging and Communications Standards Committee established a Working Group to develop a means to incorporate the optimal use of a wide variety of current compression techniques while remaining compatible with the standard. This proposed method allows the use of public domain techniques, predetermined methods between devices already aware of the selected algorithm, and the ability for the originating device to specify algorithms and parameters prior to transmitting compressed data. Because of the latter capability, the technique has the potential for supporting many compression algorithms not yet developed or in common use. Both lossless and lossy methods can be implemented. In addition to description of the overall structure of this proposal, several examples using current compression algorithms are given

  8. Statistical Analysis of Compression Methods for Storing Binary Image for Low-Memory Systems

    Directory of Open Access Journals (Sweden)

    Roman Slaby

    2013-01-01

    Full Text Available The paper is focused on the statistical comparison of the selected compression methods which are used for compression of the binary images. The aim is to asses, which of presented compression method for low-memory system requires less number of bytes of memory. For assessment of the success rates of the input image to binary image the correlation functions are used. Correlation function is one of the methods of OCR algorithm used for the digitization of printed symbols. Using of compression methods is necessary for systems based on low-power micro-controllers. The data stream saving is very important for such systems with limited memory as well as the time required for decoding the compressed data. The success rate of the selected compression algorithms is evaluated using the basic characteristics of the exploratory analysis. The searched samples represent the amount of bytes needed to compress the test images, representing alphanumeric characters.

  9. Partitional clustering algorithms

    CERN Document Server

    2015-01-01

    This book summarizes the state-of-the-art in partitional clustering. Clustering, the unsupervised classification of patterns into groups, is one of the most important tasks in exploratory data analysis. Primary goals of clustering include gaining insight into, classifying, and compressing data. Clustering has a long and rich history that spans a variety of scientific disciplines including anthropology, biology, medicine, psychology, statistics, mathematics, engineering, and computer science. As a result, numerous clustering algorithms have been proposed since the early 1950s. Among these algorithms, partitional (nonhierarchical) ones have found many applications, especially in engineering and computer science. This book provides coverage of consensus clustering, constrained clustering, large scale and/or high dimensional clustering, cluster validity, cluster visualization, and applications of clustering. Examines clustering as it applies to large and/or high-dimensional data sets commonly encountered in reali...

  10. Wavelet-Based Quantum Field Theory

    Directory of Open Access Journals (Sweden)

    Mikhail V. Altaisky

    2007-11-01

    Full Text Available The Euclidean quantum field theory for the fields $phi_{Delta x}(x$, which depend on both the position $x$ and the resolution $Delta x$, constructed in SIGMA 2 (2006, 046, on the base of the continuous wavelet transform, is considered. The Feynman diagrams in such a theory become finite under the assumption there should be no scales in internal lines smaller than the minimal of scales of external lines. This regularisation agrees with the existing calculations of radiative corrections to the electron magnetic moment. The transition from the newly constructed theory to a standard Euclidean field theory is achieved by integration over the scale arguments.

  11. Wavelet based multicarrier code division multiple access ...

    African Journals Online (AJOL)

    This paper presents the study on Wavelet transform based Multicarrier Code Division Multiple Access (MC-CDMA) system for a downlink wireless channel. The performance of the system is studied for Additive White Gaussian Noise Channel (AWGN) and slowly varying multipath channels. The bit error rate (BER) versus ...

  12. Wavelet/scalar quantization compression standard for fingerprint images

    Energy Technology Data Exchange (ETDEWEB)

    Brislawn, C.M.

    1996-06-12

    US Federal Bureau of Investigation (FBI) has recently formulated a national standard for digitization and compression of gray-scale fingerprint images. Fingerprints are scanned at a spatial resolution of 500 dots per inch, with 8 bits of gray-scale resolution. The compression algorithm for the resulting digital images is based on adaptive uniform scalar quantization of a discrete wavelet transform subband decomposition (wavelet/scalar quantization method). The FBI standard produces archival-quality images at compression ratios of around 15 to 1 and will allow the current database of paper fingerprint cards to be replaced by digital imagery. The compression standard specifies a class of potential encoders and a universal decoder with sufficient generality to reconstruct compressed images produced by any compliant encoder, allowing flexibility for future improvements in encoder technology. A compliance testing program is also being implemented to ensure high standards of image quality and interchangeability of data between different implementations.

  13. Blind compressed sensing image reconstruction based on alternating direction method

    Science.gov (United States)

    Liu, Qinan; Guo, Shuxu

    2018-04-01

    In order to solve the problem of how to reconstruct the original image under the condition of unknown sparse basis, this paper proposes an image reconstruction method based on blind compressed sensing model. In this model, the image signal is regarded as the product of a sparse coefficient matrix and a dictionary matrix. Based on the existing blind compressed sensing theory, the optimal solution is solved by the alternative minimization method. The proposed method solves the problem that the sparse basis in compressed sensing is difficult to represent, which restrains the noise and improves the quality of reconstructed image. This method ensures that the blind compressed sensing theory has a unique solution and can recover the reconstructed original image signal from a complex environment with a stronger self-adaptability. The experimental results show that the image reconstruction algorithm based on blind compressed sensing proposed in this paper can recover high quality image signals under the condition of under-sampling.

  14. Compression of FASTQ and SAM format sequencing data.

    Directory of Open Access Journals (Sweden)

    James K Bonfield

    Full Text Available Storage and transmission of the data produced by modern DNA sequencing instruments has become a major concern, which prompted the Pistoia Alliance to pose the SequenceSqueeze contest for compression of FASTQ files. We present several compression entries from the competition, Fastqz and Samcomp/Fqzcomp, including the winning entry. These are compared against existing algorithms for both reference based compression (CRAM, Goby and non-reference based compression (DSRC, BAM and other recently published competition entries (Quip, SCALCE. The tools are shown to be the new Pareto frontier for FASTQ compression, offering state of the art ratios at affordable CPU costs. All programs are freely available on SourceForge. Fastqz: https://sourceforge.net/projects/fastqz/, fqzcomp: https://sourceforge.net/projects/fqzcomp/, and samcomp: https://sourceforge.net/projects/samcomp/.

  15. Analysis of Usefulness of a Fuzzy Transform for Industrial Data Compression

    International Nuclear Information System (INIS)

    Sztyber, Anna

    2014-01-01

    This paper presents the first part of an ongoing work on detailed analysis of compression algorithms and development of an algorithm for implementation in a real industrial data processing system. Fuzzy transforms give promising results in an image compression. The main aim of this paper is to test the possibility of an application of the fuzzy transforms to the industrial data compression. Test are carried out on the data from DAMADICS benchmark. Comparison is provided with a piecewise linear compression, which is nowadays the standard in the industry. The last section contains discussion of the obtained results and plans for the future work

  16. Image compression evaluation for digital cinema: the case of Star Wars: Episode II

    Science.gov (United States)

    Schnuelle, David L.

    2003-05-01

    A program of evaluation of compression algorithms proposed for use in a digital cinema application is described and the results presented in general form. The work was intended to aid in the selection of a compression system to be used for the digital cinema release of Star Wars: Episode II, in May 2002. An additional goal was to provide feedback to the algorithm proponents on what parameters and performance levels the feature film industry is looking for in digital cinema compression. The primary conclusion of the test program is that any of the current digital cinema compression proponents will work for digital cinema distribution to today's theaters.

  17. Image compression software for the SOHO LASCO and EIT experiments

    Science.gov (United States)

    Grunes, Mitchell R.; Howard, Russell A.; Hoppel, Karl; Mango, Stephen A.; Wang, Dennis

    1994-01-01

    This paper describes the lossless and lossy image compression algorithms to be used on board the Solar Heliospheric Observatory (SOHO) in conjunction with the Large Angle Spectrometric Coronograph and Extreme Ultraviolet Imaging Telescope experiments. It also shows preliminary results obtained using similar prior imagery and discusses the lossy compression artifacts which will result. This paper is in part intended for the use of SOHO investigators who need to understand the results of SOHO compression in order to better allocate the transmission bits which they have been allocated.

  18. Novel 3D Compression Methods for Geometry, Connectivity and Texture

    Science.gov (United States)

    Siddeq, M. M.; Rodrigues, M. A.

    2016-06-01

    A large number of applications in medical visualization, games, engineering design, entertainment, heritage, e-commerce and so on require the transmission of 3D models over the Internet or over local networks. 3D data compression is an important requirement for fast data storage, access and transmission within bandwidth limitations. The Wavefront OBJ (object) file format is commonly used to share models due to its clear simple design. Normally each OBJ file contains a large amount of data (e.g. vertices and triangulated faces, normals, texture coordinates and other parameters) describing the mesh surface. In this paper we introduce a new method to compress geometry, connectivity and texture coordinates by a novel Geometry Minimization Algorithm (GM-Algorithm) in connection with arithmetic coding. First, each vertex ( x, y, z) coordinates are encoded to a single value by the GM-Algorithm. Second, triangle faces are encoded by computing the differences between two adjacent vertex locations, which are compressed by arithmetic coding together with texture coordinates. We demonstrate the method on large data sets achieving compression ratios between 87 and 99 % without reduction in the number of reconstructed vertices and triangle faces. The decompression step is based on a Parallel Fast Matching Search Algorithm (Parallel-FMS) to recover the structure of the 3D mesh. A comparative analysis of compression ratios is provided with a number of commonly used 3D file formats such as VRML, OpenCTM and STL highlighting the performance and effectiveness of the proposed method.

  19. Fractal Image Compression Based on High Entropy Values Technique

    Directory of Open Access Journals (Sweden)

    Douaa Younis Abbaas

    2018-04-01

    Full Text Available There are many attempts tried to improve the encoding stage of FIC because it consumed time. These attempts worked by reducing size of the search pool for pair range-domain matching but most of them led to get a bad quality, or a lower compression ratio of reconstructed image. This paper aims to present a method to improve performance of the full search algorithm by combining FIC (lossy compression and another lossless technique (in this case entropy coding is used. The entropy technique will reduce size of the domain pool (i. e., number of domain blocks based on the entropy value of each range block and domain block and then comparing the results of full search algorithm and proposed algorithm based on entropy technique to see each of which give best results (such as reduced the encoding time with acceptable values in both compression quali-ty parameters which are C. R (Compression Ratio and PSNR (Image Quality. The experimental results of the proposed algorithm proven that using the proposed entropy technique reduces the encoding time while keeping compression rates and reconstruction image quality good as soon as possible.

  20. Heterogeneous Compression of Large Collections of Evolutionary Trees.

    Science.gov (United States)

    Matthews, Suzanne J

    2015-01-01

    Compressing heterogeneous collections of trees is an open problem in computational phylogenetics. In a heterogeneous tree collection, each tree can contain a unique set of taxa. An ideal compression method would allow for the efficient archival of large tree collections and enable scientists to identify common evolutionary relationships over disparate analyses. In this paper, we extend TreeZip to compress heterogeneous collections of trees. TreeZip is the most efficient algorithm for compressing homogeneous tree collections. To the best of our knowledge, no other domain-based compression algorithm exists for large heterogeneous tree collections or enable their rapid analysis. Our experimental results indicate that TreeZip averages 89.03 percent (72.69 percent) space savings on unweighted (weighted) collections of trees when the level of heterogeneity in a collection is moderate. The organization of the TRZ file allows for efficient computations over heterogeneous data. For example, consensus trees can be computed in mere seconds. Lastly, combining the TreeZip compressed (TRZ) file with general-purpose compression yields average space savings of 97.34 percent (81.43 percent) on unweighted (weighted) collections of trees. Our results lead us to believe that TreeZip will prove invaluable in the efficient archival of tree collections, and enables scientists to develop novel methods for relating heterogeneous collections of trees.

  1. Compression and decompression of digital seismic waveform data for storage and communication

    International Nuclear Information System (INIS)

    Bhadauria, Y.S.; Kumar, Vijai

    1991-01-01

    Two different classes of data compression schemes, namely physical data compression schemes and logical data compression schemes are examined for their use in storage and communication of digital seismic waveform data. In physical data compression schemes, the physical size of the waveform is reduced. One, therefore, gets only a broad picture of the original waveform, when the data are retrieved and the waveform is reconstituted. Coerrelation between original and decompressed waveform varies inversely with the data compresion ratio. In the logical data compression schemes, the data are stored in a logically encoded form. Storage of unnecessary characters like blank space is avoided. On decompression original data are retrieved and compression error is nil. Three algorithms of logical data compression schemes have been developed and studied. These are : 1) optimum formatting schemes, 2) differential bit reduction scheme, and 3) six bit compression scheme. Results of the above three algorithms of logical compression class are compared with those of physical compression schemes reported in literature. It is found that for all types of data, six bit compression scheme gives the highest value of data compression ratio. (author). 6 refs., 8 figs., 1 appendix, 2 tabs

  2. Compression-based geometric pattern discovery in music

    DEFF Research Database (Denmark)

    Meredith, David

    2014-01-01

    The purpose of musical analysis is to find the best possible explanations for musical objects, where such objects may range from single chords or phrases to entire musical corpora. Kolmogorov complexity theory suggests that the best possible explanation for an object is represented by the shortest...... possible description of it. Two compression algorithms, COSIATEC and SIATECCompress, are described that take point-set representations of musical objects as input and generate compressed encodings of these point sets as output. The algorithms were evaluated on a task in which 360 folk songs were classified...

  3. Tools for signal compression applications to speech and audio coding

    CERN Document Server

    Moreau, Nicolas

    2013-01-01

    This book presents tools and algorithms required to compress/uncompress signals such as speech and music. These algorithms are largely used in mobile phones, DVD players, HDTV sets, etc. In a first rather theoretical part, this book presents the standard tools used in compression systems: scalar and vector quantization, predictive quantization, transform quantization, entropy coding. In particular we show the consistency between these different tools. The second part explains how these tools are used in the latest speech and audio coders. The third part gives Matlab programs simulating t

  4. Compressed-sensing wavenumber-scanning interferometry

    Science.gov (United States)

    Bai, Yulei; Zhou, Yanzhou; He, Zhaoshui; Ye, Shuangli; Dong, Bo; Xie, Shengli

    2018-01-01

    The Fourier transform (FT), the nonlinear least-squares algorithm (NLSA), and eigenvalue decomposition algorithm (EDA) are used to evaluate the phase field in depth-resolved wavenumber-scanning interferometry (DRWSI). However, because the wavenumber series of the laser's output is usually accompanied by nonlinearity and mode-hop, FT, NLSA, and EDA, which are only suitable for equidistant interference data, often lead to non-negligible phase errors. In this work, a compressed-sensing method for DRWSI (CS-DRWSI) is proposed to resolve this problem. By using the randomly spaced inverse Fourier matrix and solving the underdetermined equation in the wavenumber domain, CS-DRWSI determines the nonuniform sampling and spectral leakage of the interference spectrum. Furthermore, it can evaluate interference data without prior knowledge of the object. The experimental results show that CS-DRWSI improves the depth resolution and suppresses sidelobes. It can replace the FT as a standard algorithm for DRWSI.

  5. Music analysis and point-set compression

    DEFF Research Database (Denmark)

    Meredith, David

    A musical analysis represents a particular way of understanding certain aspects of the structure of a piece of music. The quality of an analysis can be evaluated to some extent by the degree to which knowledge of it improves performance on tasks such as mistake spotting, memorising a piece...... as the minimum description length principle and relates closely to certain ideas in the theory of Kolmogorov complexity. Inspired by this general principle, the hypothesis explored in this paper is that the best ways of understanding (or explanations for) a piece of music are those that are represented...... by the shortest possible descriptions of the piece. With this in mind, two compression algorithms are presented, COSIATEC and SIATECCompress. Each of these algorithms takes as input an in extenso description of a piece of music as a set of points in pitch-time space representing notes. Each algorithm...

  6. Optical pulse compression

    International Nuclear Information System (INIS)

    Glass, A.J.

    1975-01-01

    The interest in using large lasers to achieve a very short and intense pulse for generating fusion plasma has provided a strong impetus to reexamine the possibilities of optical pulse compression at high energy. Pulse compression allows one to generate pulses of long duration (minimizing damage problems) and subsequently compress optical pulses to achieve the short pulse duration required for specific applications. The ideal device for carrying out this program has not been developed. Of the two approaches considered, the Gires--Tournois approach is limited by the fact that the bandwidth and compression are intimately related, so that the group delay dispersion times the square of the bandwidth is about unity for all simple Gires--Tournois interferometers. The Treacy grating pair does not suffer from this limitation, but is inefficient because diffraction generally occurs in several orders and is limited by the problem of optical damage to the grating surfaces themselves. Nonlinear and parametric processes were explored. Some pulse compression was achieved by these techniques; however, they are generally difficult to control and are not very efficient. (U.S.)

  7. Reconfigurable Hardware for Compressing Hyperspectral Image Data

    Science.gov (United States)

    Aranki, Nazeeh; Namkung, Jeffrey; Villapando, Carlos; Kiely, Aaron; Klimesh, Matthew; Xie, Hua

    2010-01-01

    High-speed, low-power, reconfigurable electronic hardware has been developed to implement ICER-3D, an algorithm for compressing hyperspectral-image data. The algorithm and parts thereof have been the topics of several NASA Tech Briefs articles, including Context Modeler for Wavelet Compression of Hyperspectral Images (NPO-43239) and ICER-3D Hyperspectral Image Compression Software (NPO-43238), which appear elsewhere in this issue of NASA Tech Briefs. As described in more detail in those articles, the algorithm includes three main subalgorithms: one for computing wavelet transforms, one for context modeling, and one for entropy encoding. For the purpose of designing the hardware, these subalgorithms are treated as modules to be implemented efficiently in field-programmable gate arrays (FPGAs). The design takes advantage of industry- standard, commercially available FPGAs. The implementation targets the Xilinx Virtex II pro architecture, which has embedded PowerPC processor cores with flexible on-chip bus architecture. It incorporates an efficient parallel and pipelined architecture to compress the three-dimensional image data. The design provides for internal buffering to minimize intensive input/output operations while making efficient use of offchip memory. The design is scalable in that the subalgorithms are implemented as independent hardware modules that can be combined in parallel to increase throughput. The on-chip processor manages the overall operation of the compression system, including execution of the top-level control functions as well as scheduling, initiating, and monitoring processes. The design prototype has been demonstrated to be capable of compressing hyperspectral data at a rate of 4.5 megasamples per second at a conservative clock frequency of 50 MHz, with a potential for substantially greater throughput at a higher clock frequency. The power consumption of the prototype is less than 6.5 W. The reconfigurability (by means of reprogramming) of

  8. Isentropic Compression of Argon

    International Nuclear Information System (INIS)

    Oona, H.; Solem, J.C.; Veeser, L.R.; Ekdahl, C.A.; Rodriquez, P.J.; Younger, S.M.; Lewis, W.; Turley, W.D.

    1997-01-01

    We are studying the transition of argon from an insulator to a conductor by compressing the frozen gas isentropically to pressures at which neighboring atomic orbitals overlap sufficiently to allow some electron motion between atoms. Argon and the other rare gases have closed electron shells and therefore remain montomic, even when they solidify. Their simple structure makes it likely that any measured change in conductivity is due to changes in the atomic structure, not in molecular configuration. As the crystal is compressed the band gap closes, allowing increased conductivity. We have begun research to determine the conductivity at high pressures, and it is our intention to determine the compression at which the crystal becomes a metal

  9. Pulsed Compression Reactor

    Energy Technology Data Exchange (ETDEWEB)

    Roestenberg, T. [University of Twente, Enschede (Netherlands)

    2012-06-07

    The advantages of the Pulsed Compression Reactor (PCR) over the internal combustion engine-type chemical reactors are briefly discussed. Over the last four years a project concerning the fundamentals of the PCR technology has been performed by the University of Twente, Enschede, Netherlands. In order to assess the feasibility of the application of the PCR principle for the conversion methane to syngas, several fundamental questions needed to be answered. Two important questions that relate to the applicability of the PCR for any process are: how large is the heat transfer rate from a rapidly compressed and expanded volume of gas, and how does this heat transfer rate compare to energy contained in the compressed gas? And: can stable operation with a completely free piston as it is intended with the PCR be achieved?.

  10. Medullary compression syndrome

    International Nuclear Information System (INIS)

    Barriga T, L.; Echegaray, A.; Zaharia, M.; Pinillos A, L.; Moscol, A.; Barriga T, O.; Heredia Z, A.

    1994-01-01

    The authors made a retrospective study in 105 patients treated in the Radiotherapy Department of the National Institute of Neoplasmic Diseases from 1973 to 1992. The objective of this evaluation was to determine the influence of radiotherapy in patients with medullary compression syndrome in aspects concerning pain palliation and improvement of functional impairment. Treatment sheets of patients with medullary compression were revised: 32 out of 39 of patients (82%) came to hospital by their own means and continued walking after treatment, 8 out of 66 patients (12%) who came in a wheelchair or were bedridden, could mobilize by their own after treatment, 41 patients (64%) had partial alleviation of pain after treatment. In those who came by their own means and did not change their characteristics, functional improvement was observed. It is concluded that radiotherapy offers palliative benefit in patients with medullary compression syndrome. (authors). 20 refs., 5 figs., 6 tabs

  11. Graph Compression by BFS

    Directory of Open Access Journals (Sweden)

    Alberto Apostolico

    2009-08-01

    Full Text Available The Web Graph is a large-scale graph that does not fit in main memory, so that lossless compression methods have been proposed for it. This paper introduces a compression scheme that combines efficient storage with fast retrieval for the information in a node. The scheme exploits the properties of the Web Graph without assuming an ordering of the URLs, so that it may be applied to more general graphs. Tests on some datasets of use achieve space savings of about 10% over existing methods.

  12. Performance evaluation of breast image compression techniques

    Energy Technology Data Exchange (ETDEWEB)

    Anastassopoulos, G; Lymberopoulos, D [Wire Communications Laboratory, Electrical Engineering Department, University of Patras, Greece (Greece); Panayiotakis, G; Bezerianos, A [Medical Physics Department, School of Medicine, University of Patras, Greece (Greece)

    1994-12-31

    Novel diagnosis orienting tele working systems manipulate, store, and process medical data through real time communication - conferencing schemes. One of the most important factors affecting the performance of these systems is image handling. Compression algorithms can be applied to the medical images, in order to minimize : a) the volume of data to be stored in the database, b) the demanded bandwidth from the network, c) the transmission costs, and to minimize the speed of the transmitted data. In this paper an estimation of all the factors of the process that affect the presentation of breast images is made, from the time the images are produced from a modality, till the compressed images are stored, or transmitted in a Broadband network (e.g. B-ISDN). The images used were scanned images of the TOR(MAX) Leeds breast phantom, as well as typical breast images. A comparison of seven compression techniques has been done, based on objective criteria such as Mean Square Error (MSE), resolution, contrast, etc. The user can choose the appropriate compression ratio in order to achieve the desired image quality. (authors). 12 refs, 4 figs.

  13. Data compression with applications to digital radiology

    International Nuclear Information System (INIS)

    Elnahas, S.E.

    1985-01-01

    The structure of arithmetic codes is defined in terms of source parsing trees. The theoretical derivations of algorithms for the construction of optimal and sub-optimal structures are presented. The software simulation results demonstrate how arithmetic coding out performs variable-length to variable-length coding. Linear predictive coding is presented for the compression of digital diagnostic images from several imaging modalities including computed tomography, nuclear medicine, ultrasound, and magnetic resonance imaging. The problem of designing optimal predictors is formulated and alternative solutions are discussed. The results indicate that noiseless compression factors between 1.7 and 7.4 can be achieved. With nonlinear predictive coding, noisy and noiseless compression techniques are combined in a novel way that may have a potential impact on picture archiving and communication systems in radiology. Adaptive fast discrete cosine transform coding systems are used as nonlinear block predictors, and optimal delta modulation systems are used as nonlinear sequential predictors. The off-line storage requirements for archiving diagnostic images are reasonably reduced by the nonlinear block predictive coding. The online performance, however, seems to be bounded by that of the linear systems. The subjective quality of image imperfect reproductions from the cosine transform coding is promising and prompts future research on the compression of diagnostic images by transform coding systems and the clinical evaluation of these systems

  14. Performance evaluation of breast image compression techniques

    International Nuclear Information System (INIS)

    Anastassopoulos, G.; Lymberopoulos, D.; Panayiotakis, G.; Bezerianos, A.

    1994-01-01

    Novel diagnosis orienting tele working systems manipulate, store, and process medical data through real time communication - conferencing schemes. One of the most important factors affecting the performance of these systems is image handling. Compression algorithms can be applied to the medical images, in order to minimize : a) the volume of data to be stored in the database, b) the demanded bandwidth from the network, c) the transmission costs, and to minimize the speed of the transmitted data. In this paper an estimation of all the factors of the process that affect the presentation of breast images is made, from the time the images are produced from a modality, till the compressed images are stored, or transmitted in a Broadband network (e.g. B-ISDN). The images used were scanned images of the TOR(MAX) Leeds breast phantom, as well as typical breast images. A comparison of seven compression techniques has been done, based on objective criteria such as Mean Square Error (MSE), resolution, contrast, etc. The user can choose the appropriate compression ratio in order to achieve the desired image quality. (authors)

  15. Lossless medical image compression with a hybrid coder

    Science.gov (United States)

    Way, Jing-Dar; Cheng, Po-Yuen

    1998-10-01

    The volume of medical image data is expected to increase dramatically in the next decade due to the large use of radiological image for medical diagnosis. The economics of distributing the medical image dictate that data compression is essential. While there is lossy image compression, the medical image must be recorded and transmitted lossless before it reaches the users to avoid wrong diagnosis due to the image data lost. Therefore, a low complexity, high performance lossless compression schematic that can approach the theoretic bound and operate in near real-time is needed. In this paper, we propose a hybrid image coder to compress the digitized medical image without any data loss. The hybrid coder is constituted of two key components: an embedded wavelet coder and a lossless run-length coder. In this system, the medical image is compressed with the lossy wavelet coder first, and the residual image between the original and the compressed ones is further compressed with the run-length coder. Several optimization schemes have been used in these coders to increase the coding performance. It is shown that the proposed algorithm is with higher compression ratio than run-length entropy coders such as arithmetic, Huffman and Lempel-Ziv coders.

  16. Deterministic Compressed Sensing

    Science.gov (United States)

    2011-11-01

    39 4.3 Digital Communications . . . . . . . . . . . . . . . . . . . . . . . . . 40 4.4 Group Testing ...deterministic de - sign matrices. All bounds ignore the O() constants. . . . . . . . . . . 131 xvi List of Algorithms 1 Iterative Hard Thresholding Algorithm...sensing is information theoretically possible using any (2k, )-RIP sensing matrix . The following celebrated results of Candès, Romberg and Tao [54

  17. An efficient and extensible approach for compressing phylogenetic trees

    KAUST Repository

    Matthews, Suzanne J

    2011-01-01

    Background: Biologists require new algorithms to efficiently compress and store their large collections of phylogenetic trees. Our previous work showed that TreeZip is a promising approach for compressing phylogenetic trees. In this paper, we extend our TreeZip algorithm by handling trees with weighted branches. Furthermore, by using the compressed TreeZip file as input, we have designed an extensible decompressor that can extract subcollections of trees, compute majority and strict consensus trees, and merge tree collections using set operations such as union, intersection, and set difference.Results: On unweighted phylogenetic trees, TreeZip is able to compress Newick files in excess of 98%. On weighted phylogenetic trees, TreeZip is able to compress a Newick file by at least 73%. TreeZip can be combined with 7zip with little overhead, allowing space savings in excess of 99% (unweighted) and 92%(weighted). Unlike TreeZip, 7zip is not immune to branch rotations, and performs worse as the level of variability in the Newick string representation increases. Finally, since the TreeZip compressed text (TRZ) file contains all the semantic information in a collection of trees, we can easily filter and decompress a subset of trees of interest (such as the set of unique trees), or build the resulting consensus tree in a matter of seconds. We also show the ease of which set operations can be performed on TRZ files, at speeds quicker than those performed on Newick or 7zip compressed Newick files, and without loss of space savings.Conclusions: TreeZip is an efficient approach for compressing large collections of phylogenetic trees. The semantic and compact nature of the TRZ file allow it to be operated upon directly and quickly, without a need to decompress the original Newick file. We believe that TreeZip will be vital for compressing and archiving trees in the biological community. © 2011 Matthews and Williams; licensee BioMed Central Ltd.

  18. An efficient and extensible approach for compressing phylogenetic trees.

    Science.gov (United States)

    Matthews, Suzanne J; Williams, Tiffani L

    2011-10-18

    Biologists require new algorithms to efficiently compress and store their large collections of phylogenetic trees. Our previous work showed that TreeZip is a promising approach for compressing phylogenetic trees. In this paper, we extend our TreeZip algorithm by handling trees with weighted branches. Furthermore, by using the compressed TreeZip file as input, we have designed an extensible decompressor that can extract subcollections of trees, compute majority and strict consensus trees, and merge tree collections using set operations such as union, intersection, and set difference. On unweighted phylogenetic trees, TreeZip is able to compress Newick files in excess of 98%. On weighted phylogenetic trees, TreeZip is able to compress a Newick file by at least 73%. TreeZip can be combined with 7zip with little overhead, allowing space savings in excess of 99% (unweighted) and 92%(weighted). Unlike TreeZip, 7zip is not immune to branch rotations, and performs worse as the level of variability in the Newick string representation increases. Finally, since the TreeZip compressed text (TRZ) file contains all the semantic information in a collection of trees, we can easily filter and decompress a subset of trees of interest (such as the set of unique trees), or build the resulting consensus tree in a matter of seconds. We also show the ease of which set operations can be performed on TRZ files, at speeds quicker than those performed on Newick or 7zip compressed Newick files, and without loss of space savings. TreeZip is an efficient approach for compressing large collections of phylogenetic trees. The semantic and compact nature of the TRZ file allow it to be operated upon directly and quickly, without a need to decompress the original Newick file. We believe that TreeZip will be vital for compressing and archiving trees in the biological community.

  19. Compressible generalized Newtonian fluids

    Czech Academy of Sciences Publication Activity Database

    Málek, Josef; Rajagopal, K.R.

    2010-01-01

    Roč. 61, č. 6 (2010), s. 1097-1110 ISSN 0044-2275 Institutional research plan: CEZ:AV0Z20760514 Keywords : power law fluid * uniform temperature * compressible fluid Subject RIV: BJ - Thermodynamics Impact factor: 1.290, year: 2010

  20. Temporal compressive sensing systems

    Science.gov (United States)

    Reed, Bryan W.

    2017-12-12

    Methods and systems for temporal compressive sensing are disclosed, where within each of one or more sensor array data acquisition periods, one or more sensor array measurement datasets comprising distinct linear combinations of time slice data are acquired, and where mathematical reconstruction allows for calculation of accurate representations of the individual time slice datasets.

  1. Compression of Infrared images

    DEFF Research Database (Denmark)

    Mantel, Claire; Forchhammer, Søren

    2017-01-01

    best for bits-per-pixel rates below 1.4 bpp, while HEVC obtains best performance in the range 1.4 to 6.5 bpp. The compression performance is also evaluated based on maximum errors. These results also show that HEVC can achieve a precision of 1°C with an average of 1.3 bpp....

  2. Gas compression infrared generator

    International Nuclear Information System (INIS)

    Hug, W.F.

    1980-01-01

    A molecular gas is compressed in a quasi-adiabatic manner to produce pulsed radiation during each compressor cycle when the pressure and temperature are sufficiently high, and part of the energy is recovered during the expansion phase, as defined in U.S. Pat. No. 3,751,666; characterized by use of a cylinder with a reciprocating piston as a compressor

  3. On-Chip Neural Data Compression Based On Compressed Sensing With Sparse Sensing Matrices.

    Science.gov (United States)

    Zhao, Wenfeng; Sun, Biao; Wu, Tong; Yang, Zhi

    2018-02-01

    On-chip neural data compression is an enabling technique for wireless neural interfaces that suffer from insufficient bandwidth and power budgets to transmit the raw data. The data compression algorithm and its implementation should be power and area efficient and functionally reliable over different datasets. Compressed sensing is an emerging technique that has been applied to compress various neurophysiological data. However, the state-of-the-art compressed sensing (CS) encoders leverage random but dense binary measurement matrices, which incur substantial implementation costs on both power and area that could offset the benefits from the reduced wireless data rate. In this paper, we propose two CS encoder designs based on sparse measurement matrices that could lead to efficient hardware implementation. Specifically, two different approaches for the construction of sparse measurement matrices, i.e., the deterministic quasi-cyclic array code (QCAC) matrix and -sparse random binary matrix [-SRBM] are exploited. We demonstrate that the proposed CS encoders lead to comparable recovery performance. And efficient VLSI architecture designs are proposed for QCAC-CS and -SRBM encoders with reduced area and total power consumption.

  4. Statistical analysis of the hydrodynamic pressure in the near field of compressible jets

    International Nuclear Information System (INIS)

    Camussi, R.; Di Marco, A.; Castelain, T.

    2017-01-01

    Highlights: • Statistical properties of pressure fluctuations retrieved through wavelet analysis • Time delay PDFs approximated by a log-normal distribution • Amplitude PDFs approximated by a Gamma distribution • Random variable PDFs weakly dependent upon position and Mach number. • A general stochastic model achieved for the distance dependency - Abstract: This paper is devoted to the statistical characterization of the pressure fluctuations measured in the near field of a compressible jet at two subsonic Mach numbers, 0.6 and 0.9. The analysis is focused on the hydrodynamic pressure measured at different distances from the jet exit and analyzed at the typical frequency associated to the Kelvin–Helmholtz instability. Statistical properties are retrieved by the application of the wavelet transform to the experimental data and the computation of the wavelet scalogram around that frequency. This procedure highlights traces of events that appear intermittently in time and have variable strength. A wavelet-based event tracking procedure has been applied providing a statistical characterization of the time delay between successive events and of their energy level. On this basis, two stochastic models are proposed and validated against the experimental data in the different flow conditions

  5. Contextual Compression of Large-Scale Wind Turbine Array Simulations: Preprint

    Energy Technology Data Exchange (ETDEWEB)

    Gruchalla, Kenny M [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Brunhart-Lupo, Nicholas J [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Potter, Kristin C [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Clyne, John [National Center for Atmospheric Research

    2017-11-03

    Data sizes are becoming a critical issue particularly for HPC applications. We have developed a user-driven lossy wavelet-based storage model to facilitate the analysis and visualization of large-scale wind turbine array simulations. The model stores data as heterogeneous blocks of wavelet coefficients, providing high-fidelity access to user-defined data regions believed the most salient, while providing lower-fidelity access to less salient regions on a block-by-block basis. In practice, by retaining the wavelet coefficients as a function of feature saliency, we have seen data reductions in excess of 94 percent, while retaining lossless information in the turbine-wake regions most critical to analysis and providing enough (low-fidelity) contextual information in the upper atmosphere to track incoming coherent turbulent structures. Our contextual wavelet compression approach has allowed us to deliver interactive visual analysis while providing the user control over where data loss, and thus reduction in accuracy, in the analysis occurs. We argue this reduced but contexualized representation is a valid approach and encourages contextual data management.

  6. Dictionary Approaches to Image Compression and Reconstruction

    Science.gov (United States)

    Ziyad, Nigel A.; Gilmore, Erwin T.; Chouikha, Mohamed F.

    1998-01-01

    This paper proposes using a collection of parameterized waveforms, known as a dictionary, for the purpose of medical image compression. These waveforms, denoted as phi(sub gamma), are discrete time signals, where gamma represents the dictionary index. A dictionary with a collection of these waveforms is typically complete or overcomplete. Given such a dictionary, the goal is to obtain a representation image based on the dictionary. We examine the effectiveness of applying Basis Pursuit (BP), Best Orthogonal Basis (BOB), Matching Pursuits (MP), and the Method of Frames (MOF) methods for the compression of digitized radiological images with a wavelet-packet dictionary. The performance of these algorithms is studied for medical images with and without additive noise.

  7. The application of sparse linear prediction dictionary to compressive sensing in speech signals

    Directory of Open Access Journals (Sweden)

    YOU Hanxu

    2016-04-01

    Full Text Available Appling compressive sensing (CS,which theoretically guarantees that signal sampling and signal compression can be achieved simultaneously,into audio and speech signal processing is one of the most popular research topics in recent years.In this paper,K-SVD algorithm was employed to learn a sparse linear prediction dictionary regarding as the sparse basis of underlying speech signals.Compressed signals was obtained by applying random Gaussian matrix to sample original speech frames.Orthogonal matching pursuit (OMP and compressive sampling matching pursuit (CoSaMP were adopted to recovery original signals from compressed one.Numbers of experiments were carried out to investigate the impact of speech frames length,compression ratios,sparse basis and reconstruction algorithms on CS performance.Results show that sparse linear prediction dictionary can advance the performance of speech signals reconstruction compared with discrete cosine transform (DCT matrix.

  8. Low complexity lossless compression of underwater sound recordings.

    Science.gov (United States)

    Johnson, Mark; Partan, Jim; Hurst, Tom

    2013-03-01

    Autonomous listening devices are increasingly used to study vocal aquatic animals, and there is a constant need to record longer or with greater bandwidth, requiring efficient use of memory and battery power. Real-time compression of sound has the potential to extend recording durations and bandwidths at the expense of increased processing operations and therefore power consumption. Whereas lossy methods such as MP3 introduce undesirable artifacts, lossless compression algorithms (e.g., flac) guarantee exact data recovery. But these algorithms are relatively complex due to the wide variety of signals they are designed to compress. A simpler lossless algorithm is shown here to provide compression factors of three or more for underwater sound recordings over a range of noise environments. The compressor was evaluated using samples from drifting and animal-borne sound recorders with sampling rates of 16-240 kHz. It achieves >87% of the compression of more-complex methods but requires about 1/10 of the processing operations resulting in less than 1 mW power consumption at a sampling rate of 192 kHz on a low-power microprocessor. The potential to triple recording duration with a minor increase in power consumption and no loss in sound quality may be especially valuable for battery-limited tags and robotic vehicles.

  9. Advanced algorithms for information science

    Energy Technology Data Exchange (ETDEWEB)

    Argo, P.; Brislawn, C.; Fitzgerald, T.J.; Kelley, B.; Kim, W.H.; Mazieres, B.; Roeder, H.; Strottman, D.

    1998-12-31

    This is the final report of a one-year, Laboratory Directed Research and Development (LDRD) project at Los Alamos National Laboratory (LANL). In a modern information-controlled society the importance of fast computational algorithms facilitating data compression and image analysis cannot be overemphasized. Feature extraction and pattern recognition are key to many LANL projects and the same types of dimensionality reduction and compression used in source coding are also applicable to image understanding. The authors have begun developing wavelet coding which decomposes data into different length-scale and frequency bands. New transform-based source-coding techniques offer potential for achieving better, combined source-channel coding performance by using joint-optimization techniques. They initiated work on a system that compresses the video stream in real time, and which also takes the additional step of analyzing the video stream concurrently. By using object-based compression schemes (where an object is an identifiable feature of the video signal, repeatable in time or space), they believe that the analysis is directly related to the efficiency of the compression.

  10. Advanced algorithms for information science

    International Nuclear Information System (INIS)

    Argo, P.; Brislawn, C.; Fitzgerald, T.J.; Kelley, B.; Kim, W.H.; Mazieres, B.; Roeder, H.; Strottman, D.

    1998-01-01

    This is the final report of a one-year, Laboratory Directed Research and Development (LDRD) project at Los Alamos National Laboratory (LANL). In a modern information-controlled society the importance of fast computational algorithms facilitating data compression and image analysis cannot be overemphasized. Feature extraction and pattern recognition are key to many LANL projects and the same types of dimensionality reduction and compression used in source coding are also applicable to image understanding. The authors have begun developing wavelet coding which decomposes data into different length-scale and frequency bands. New transform-based source-coding techniques offer potential for achieving better, combined source-channel coding performance by using joint-optimization techniques. They initiated work on a system that compresses the video stream in real time, and which also takes the additional step of analyzing the video stream concurrently. By using object-based compression schemes (where an object is an identifiable feature of the video signal, repeatable in time or space), they believe that the analysis is directly related to the efficiency of the compression

  11. Multiparametric amplitude analysis with on-line compression using adaptive orthogonal transform

    Energy Technology Data Exchange (ETDEWEB)

    Morhac, M; Matousek, V; Turzo, I

    1996-12-31

    The new method of multiparameter amplitude analysis with on-line compression is developed. The proposed method decreases the memory needed to store multidimensional histograms. Examples of employing the algorithms for three-dimensional spectra are presented. 5 refs.

  12. Compressive Sensing Based Bio-Inspired Shape Feature Detection CMOS Imager

    Science.gov (United States)

    Duong, Tuan A. (Inventor)

    2015-01-01

    A CMOS imager integrated circuit using compressive sensing and bio-inspired detection is presented which integrates novel functions and algorithms within a novel hardware architecture enabling efficient on-chip implementation.

  13. Medical Image Compression Based on Vector Quantization with Variable Block Sizes in Wavelet Domain

    OpenAIRE

    Jiang, Huiyan; Ma, Zhiyuan; Hu, Yang; Yang, Benqiang; Zhang, Libo

    2012-01-01

    An optimized medical image compression algorithm based on wavelet transform and improved vector quantization is introduced. The goal of the proposed method is to maintain the diagnostic-related information of the medical image at a high compression ratio. Wavelet transformation was first applied to the image. For the lowest-frequency subband of wavelet coefficients, a lossless compression method was exploited; for each of the high-frequency subbands, an optimized vector quantization with vari...

  14. Compressible Fluid Suspension Performance Testing

    National Research Council Canada - National Science Library

    Hoogterp, Francis

    2003-01-01

    ... compressible fluid suspension system that was designed and installed on the vehicle by DTI. The purpose of the tests was to evaluate the possible performance benefits of the compressible fluid suspension system...

  15. A Novel Algorithm for Feature Level Fusion Using SVM Classifier for Multibiometrics-Based Person Identification

    Directory of Open Access Journals (Sweden)

    Ujwalla Gawande

    2013-01-01

    Full Text Available Recent times witnessed many advancements in the field of biometric and ultimodal biometric fields. This is typically observed in the area, of security, privacy, and forensics. Even for the best of unimodal biometric systems, it is often not possible to achieve a higher recognition rate. Multimodal biometric systems overcome various limitations of unimodal biometric systems, such as nonuniversality, lower false acceptance, and higher genuine acceptance rates. More reliable recognition performance is achievable as multiple pieces of evidence of the same identity are available. The work presented in this paper is focused on multimodal biometric system using fingerprint and iris. Distinct textual features of the iris and fingerprint are extracted using the Haar wavelet-based technique. A novel feature level fusion algorithm is developed to combine these unimodal features using the Mahalanobis distance technique. A support-vector-machine-based learning algorithm is used to train the system using the feature extracted. The performance of the proposed algorithms is validated and compared with other algorithms using the CASIA iris database and real fingerprint database. From the simulation results, it is evident that our algorithm has higher recognition rate and very less false rejection rate compared to existing approaches.

  16. The effect of depth compression on multiview rendering quality

    NARCIS (Netherlands)

    Merkle, P.; Morvan, Y.; Smolic, A.; Farin, D.S.; Mueller, K..; With, de P.H.N.; Wiegand, T.

    2010-01-01

    This paper presents a comparative study on different techniques for depth-image compression and its implications on the quality of multiview video plus depth virtual view rendering. A novel coding algorithm for depth images that concentrates on their special characteristics, namely smooth regions

  17. Integral representation in the hodograph plane of compressible flow

    DEFF Research Database (Denmark)

    Hansen, Erik Bent; Hsiao, G.C.

    2003-01-01

    Compressible flow is considered in the hodograph plane. The linearity of the equation determining the stream function is exploited to derive a representation formula involving boundary data only, and a fundamental solution to the adjoint equation. For subsonic flow, an efficient algorithm...

  18. The FBI compression standard for digitized fingerprint images

    Energy Technology Data Exchange (ETDEWEB)

    Brislawn, C.M.; Bradley, J.N. [Los Alamos National Lab., NM (United States); Onyshczak, R.J. [National Inst. of Standards and Technology, Gaithersburg, MD (United States); Hopper, T. [Federal Bureau of Investigation, Washington, DC (United States)

    1996-10-01

    The FBI has formulated national standards for digitization and compression of gray-scale fingerprint images. The compression algorithm for the digitized images is based on adaptive uniform scalar quantization of a discrete wavelet transform subband decomposition, a technique referred to as the wavelet/scalar quantization method. The algorithm produces archival-quality images at compression ratios of around 15 to 1 and will allow the current database of paper fingerprint cards to be replaced by digital imagery. A compliance testing program is also being implemented to ensure high standards of image quality and interchangeability of data between different implementations. We will review the current status of the FBI standard, including the compliance testing process and the details of the first-generation encoder.

  19. Signal Compression in Automatic Ultrasonic testing of Rails

    Directory of Open Access Journals (Sweden)

    Tomasz Ciszewski

    2007-01-01

    Full Text Available Full recording of the most important information carried by the ultrasonic signals allows realizing statistical analysis of measurement data. Statistical analysis of the results gathered during automatic ultrasonic tests gives data which lead, together with use of features of measuring method, differential lossy coding and traditional method of lossless data compression (Huffman’s coding, dictionary coding, to a comprehensive, efficient data compression algorithm. The subject of the article is to present the algorithm and the benefits got by using it in comparison to alternative compression methods. Storage of large amount  of data allows to create an electronic catalogue of ultrasonic defects. If it is created, the future qualification system training in the new solutions of the automat for test in rails will be possible.

  20. Enhancing Perceived Quality of Compressed Images and Video with Anisotropic Diffusion and Fuzzy Filtering

    DEFF Research Database (Denmark)

    Nadernejad, Ehsan; Korhonen, Jari; Forchhammer, Søren

    2013-01-01

    and subjective results on JPEG compressed images, as well as MJPEG and H.264/AVC compressed video, indicate that the proposed algorithms employing directional and spatial fuzzy filters achieve better artifact reduction than other methods. In particular, robust improvements with H.264/AVC video have been gained...